BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008825
(552 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/405 (40%), Positives = 237/405 (58%), Gaps = 49/405 (12%)
Query: 91 QNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK 150
+ N+L++LE + ++++ ++ +DFE+L +IG+GAFGEV V + K V+AMK L
Sbjct: 49 EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN 108
Query: 151 KSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR- 209
K EML+R + R ER++L DS I L+ +FQDD LYL+M+Y GGD++TLL +
Sbjct: 109 KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF 168
Query: 210 KDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCS 269
+D L E+ ARFY+AE V+AI+S+H+ HY+HRDIKPDN+L+D GH+RL+DFG C L
Sbjct: 169 EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL--- 225
Query: 270 TLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL 329
+D T+ +++ VGTPDYI+PE+L
Sbjct: 226 ---MEDGTVQSSV----------------------------------AVGTPDYISPEIL 248
Query: 330 L-----KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK- 383
K YG ECDWWSLG MYEML G PFY++ + T KI+N + +FP +
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTD 308
Query: 384 LSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVNDELDTQ 443
+S AKDLI +L+C+ RLG G ++ K HP+F G+DW I EA +IPEV+ DT
Sbjct: 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTS 368
Query: 444 NFEKFEESDNQTKTSSKTGPWRKMLSSKDINFVGYTYKNFEIVND 488
NF+ + D + + P S + FVG+TY + +++D
Sbjct: 369 NFDV--DDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSCVLSD 411
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 233/394 (59%), Gaps = 51/394 (12%)
Query: 93 NLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKS 152
N+ FL + E +++ +M A+D++++ +IG+GAFGEV++ R K + VYAMK L K
Sbjct: 52 NIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKF 111
Query: 153 EMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDT 212
EM++R ER+++A +S +V+L+C+FQDD++LY++MEY+PGGD++ L+ D
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD- 170
Query: 213 LTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
+ E A+FY AE VLA+++IH IHRD+KPDN+LLDK+GHL+L+DFG C +D + +
Sbjct: 171 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 273 EQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK 332
D + VGTPDYI+PEVL +
Sbjct: 231 HCD----------------------------------------TAVGTPDYISPEVLKSQ 250
Query: 333 G----YGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEA 388
G YG ECDWWS+G ++EMLVG PFY+D + T KI++ + L FPE+A++S A
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHA 310
Query: 389 KDLISKLLCNVNQRLGAKGADEIKVHPWF--DGVDWARIYQMEAAFIPEVNDELDTQNFE 446
K+LI L + RLG G +EIK HP+F D +W I + A +PE++ ++D+ NF+
Sbjct: 311 KNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFD 370
Query: 447 KFEESDNQTKTSSKTGPWRKMLSSKDINFVGYTY 480
E+ K +T P K + F+G+TY
Sbjct: 371 DIEDD----KGDVETFPIPKAFVGNQLPFIGFTY 400
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 227/394 (57%), Gaps = 51/394 (12%)
Query: 93 NLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKS 152
N+ FL + + +++ +M A+D+E++ +IG+GAFGEV++ R K+T VYAMK L K
Sbjct: 46 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 105
Query: 153 EMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDT 212
EM++R ER+++A +S +V+L+ +FQDD +LY++MEY+PGGD++ L+ D
Sbjct: 106 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD- 164
Query: 213 LTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
+ E ARFY AE VLA+++IH +IHRD+KPDN+LLDK GHL+L+DFG C ++ +
Sbjct: 165 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 273 EQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK 332
D + VGTPDYI+PEVL +
Sbjct: 225 RCD----------------------------------------TAVGTPDYISPEVLKSQ 244
Query: 333 G----YGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEA 388
G YG ECDWWS+G +YEMLVG PFY+D + T KI+N + L FP++ +S EA
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 304
Query: 389 KDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWA--RIYQMEAAFIPEVNDELDTQNFE 446
K+LI L + RLG G +EIK H +F WA + A +P+++ ++DT NF+
Sbjct: 305 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD 364
Query: 447 KFEESDNQTKTSSKTGPWRKMLSSKDINFVGYTY 480
EE K +T P K + FVG+TY
Sbjct: 365 DLEED----KGEEETFPIPKAFVGNQLPFVGFTY 394
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 234/411 (56%), Gaps = 52/411 (12%)
Query: 77 LEKKLADADVSEEDQN-NLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVC 135
L+ + D D +N N+ FL + + +++ +M A+D+E++ +IG+GAFGEV++
Sbjct: 34 LDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV 93
Query: 136 REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIM 195
R K+T VYAMK L K EM++R ER+++A +S +V+L+ +FQDD +LY++M
Sbjct: 94 RHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153
Query: 196 EYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHL 255
EY+PGGD++ L+ D + E ARFY AE VLA+++IH +IHRD+KPDN+LLDK GHL
Sbjct: 154 EYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 212
Query: 256 RLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAY 315
+L+DFG C ++ + D
Sbjct: 213 KLADFGTCMKMNKEGMVRCD---------------------------------------- 232
Query: 316 STVGTPDYIAPEVLLKKG----YGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVN 371
+ VGTPDYI+PEVL +G YG ECDWWS+G +YEMLVG PFY+D + T KI+N
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
Query: 372 WRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWA--RIYQME 429
+ L FP++ +S EAK+LI L + RLG G +EIK H +F WA +
Sbjct: 293 HKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 430 AAFIPEVNDELDTQNFEKFEESDNQTKTSSKTGPWRKMLSSKDINFVGYTY 480
A +P+++ ++DT NF+ EE K +T P K + FVG+TY
Sbjct: 353 APVVPDLSSDIDTSNFDDLEED----KGEEETFPIPKAFVGNQLPFVGFTY 399
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 289 bits (739), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 234/411 (56%), Gaps = 52/411 (12%)
Query: 77 LEKKLADADVSEEDQN-NLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVC 135
L+ + D D +N N+ FL + + +++ +M A+D+E++ +IG+GAFGEV++
Sbjct: 34 LDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV 93
Query: 136 REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIM 195
R K+T VYAMK L K EM++R ER+++A +S +V+L+ +FQDD +LY++M
Sbjct: 94 RHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153
Query: 196 EYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHL 255
EY+PGGD++ L+ D + E ARFY AE VLA+++IH +IHRD+KPDN+LLDK GHL
Sbjct: 154 EYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 212
Query: 256 RLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAY 315
+L+DFG C ++ + D
Sbjct: 213 KLADFGTCMKMNKEGMVRCD---------------------------------------- 232
Query: 316 STVGTPDYIAPEVLLKKG----YGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVN 371
+ VGTPDYI+PEVL +G YG ECDWWS+G +YEMLVG PFY+D + T KI+N
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
Query: 372 WRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWA--RIYQME 429
+ L FP++ +S EAK+LI L + RLG G +EIK H +F WA +
Sbjct: 293 HKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 430 AAFIPEVNDELDTQNFEKFEESDNQTKTSSKTGPWRKMLSSKDINFVGYTY 480
A +P+++ ++DT NF+ EE K +T P K + FVG+TY
Sbjct: 353 APVVPDLSSDIDTSNFDDLEED----KGEEETFPIPKAFVGNQLPFVGFTY 399
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 232/403 (57%), Gaps = 55/403 (13%)
Query: 96 KFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEML 155
+FLE + ++ ++ +DFE++ +IG+GAFGEV V + K T +YAMK L K EML
Sbjct: 70 EFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEML 129
Query: 156 RRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLT 214
+R + R ER++L D I L+ +FQD+ LYL+M+Y GGD++TLL + +D L
Sbjct: 130 KRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP 189
Query: 215 EDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQ 274
ED ARFY+ E VLAI+SIH+ HY+HRDIKPDN+LLD GH+RL+DFG C +
Sbjct: 190 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM-------- 241
Query: 275 DFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL--LKK 332
N +G+ Q++ VGTPDYI+PE+L ++
Sbjct: 242 ------NDDGTVQSS--------------------------VAVGTPDYISPEILQAMED 269
Query: 333 G---YGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK-LSIEA 388
G YG ECDWWSLG MYEML G PFY++ + T KI+N +FP +S EA
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEA 329
Query: 389 KDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVNDELDTQNFEKF 448
KDLI +L+C+ +RLG G ++ K H +F+G++W I +EA +IP+V+ DT NF+
Sbjct: 330 KDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVD 389
Query: 449 EESDNQTKT---SSKTGPWRKMLSSKDINFVGYTYKNFEIVND 488
++ T+ S TG S + F+G+T+ +D
Sbjct: 390 DDVLRNTEILPPGSHTG-----FSGLHLPFIGFTFTTESCFSD 427
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 285 bits (728), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 232/403 (57%), Gaps = 55/403 (13%)
Query: 96 KFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEML 155
+FLE + ++ ++ +DFE++ +IG+GAFGEV V + K T +YAMK L K EML
Sbjct: 54 EFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEML 113
Query: 156 RRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLT 214
+R + R ER++L D I L+ +FQD+ LYL+M+Y GGD++TLL + +D L
Sbjct: 114 KRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP 173
Query: 215 EDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQ 274
ED ARFY+ E VLAI+SIH+ HY+HRDIKPDN+LLD GH+RL+DFG C +
Sbjct: 174 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM-------- 225
Query: 275 DFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL--LKK 332
N +G+ Q++ VGTPDYI+PE+L ++
Sbjct: 226 ------NDDGTVQSS--------------------------VAVGTPDYISPEILQAMED 253
Query: 333 G---YGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK-LSIEA 388
G YG ECDWWSLG MYEML G PFY++ + T KI+N +FP +S EA
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEA 313
Query: 389 KDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVNDELDTQNFEKF 448
KDLI +L+C+ +RLG G ++ K H +F+G++W I +EA +IP+V+ DT NF+
Sbjct: 314 KDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVD 373
Query: 449 EESDNQTKT---SSKTGPWRKMLSSKDINFVGYTYKNFEIVND 488
++ T+ S TG S + F+G+T+ +D
Sbjct: 374 DDVLRNTEILPPGSHTG-----FSGLHLPFIGFTFTTESCFSD 411
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/414 (39%), Positives = 227/414 (54%), Gaps = 63/414 (15%)
Query: 97 FLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLR 156
FL+ E +RL+ ++ DDFE+L +IG+GAF EV V + K TG VYAMK + K +ML+
Sbjct: 42 FLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK 101
Query: 157 RGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTE 215
RG+V R ER++L D I +L+ +FQD+ +LYL+MEY GGD++TLL + + +
Sbjct: 102 RGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA 161
Query: 216 DEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQD 275
+ ARFY+AE V+AI+S+H+ Y+HRDIKPDN+LLD+ GH+RL+DFG C L D
Sbjct: 162 EMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL------RAD 215
Query: 276 FTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL------ 329
T+ R ++A VGTPDY++PE+L
Sbjct: 216 GTV-------------------------------RSLVA---VGTPDYLSPEILQAVGGG 241
Query: 330 -LKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFP-EEAKLSIE 387
YG ECDWW+LG YEM G PFY+D T KIV+++ HL P + + E
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEE 301
Query: 388 AKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVNDELDTQNFEK 447
A+D I +LLC RLG GA + + HP+F G+DW + F P+ DT NF+
Sbjct: 302 ARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFDL 361
Query: 448 FEESDNQTKTSSKTGPWRKMLS--------SKDINFVGYTYKNFEIVNDYQVPG 493
E D T S G + LS + FVGY+Y + D +VPG
Sbjct: 362 VE--DGLTAMVSGGG---ETLSDIREGAPLGVHLPFVGYSYSCMAL-RDSEVPG 409
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + IG G+FG V + + TG+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+PGGDM +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + IG G+FG V + + TG+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+PGGDM +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 211/390 (54%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 184 TDFGFAKRVKGRT--------------------------------------------WXL 199
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 211/390 (54%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 24 AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 83
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 84 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 144 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 203
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 204 TDFGFAKRVKGRT--------------------------------------------WXL 219
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 277
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 278 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 335
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 336 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 365
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + K TG+ YA
Sbjct: 12 EQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYA 71
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+PGG+M +
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 131
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 132 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 192 VKGRT--------------------------------------------WXLCGTPEYLA 207
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 263
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 323
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 324 DTSNFDDYEEEEIRVXINEKCG 345
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 210/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + IG G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKH 62
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 183 ADFGFAKRVKGRT--------------------------------------------WXL 198
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 211/390 (54%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
K TG+ +AMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 183 TDFGFAKRVKGRT--------------------------------------------WXL 198
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 211/390 (54%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T ++
Sbjct: 184 TDFGFAKRVKGRT--------------------------------------------WTL 199
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVSINEKCG 345
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 210/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NL++D+ G++++
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 184 TDFGFAKRVKGRT--------------------------------------------WXL 199
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 194/352 (55%), Gaps = 53/352 (15%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D FE + +G G+FG V + + K TG+ YAMK L K ++++ Q+EH E+ +L V+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
+VKL SF+D+ LY++MEY+PGG+M + L R +E ARFY A+ VL E +H
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
I+RD+KP+NLL+D+ G+++++DFG K + T
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT------------------------- 188
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
+ GTP+Y+APE++L KGY DWW+LG ++YEM GYP
Sbjct: 189 -------------------WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIK 412
PF++D P+ KIV+ + ++FP + S + KDL+ LL ++ +R G G ++IK
Sbjct: 230 PFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 285
Query: 413 VHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
H WF DW IYQ +EA FIP+ DT NF+ +EE + + + K G
Sbjct: 286 NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVXINEKCG 337
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + K TG+ +A
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+PGG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVSINEKCG 344
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + K TG+ +A
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+PGG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 210/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 184 TDFGFAKRVKGRT--------------------------------------------WXL 199
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++I H WF DW IYQ +EA F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAPF 315
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 210/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 183 TDFGFAKRVKGRT--------------------------------------------WXL 198
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 210/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 184 TDFGFAKRVKGRT--------------------------------------------WXL 199
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 193/352 (54%), Gaps = 53/352 (15%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D FE + +G G+FG V + + K TG+ YAMK L K ++++ Q+EH E+ +L V+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
+VKL SF+D+ LY++MEY+PGG+M + L R E ARFY A+ VL E +H
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
I+RD+KP+NLL+D+ G+++++DFG K + T
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT------------------------- 188
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
+ GTP+Y+APE++L KGY DWW+LG ++YEM GYP
Sbjct: 189 -------------------WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIK 412
PF++D P+ KIV+ + ++FP + S + KDL+ LL ++ +R G G ++IK
Sbjct: 230 PFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 285
Query: 413 VHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
H WF DW IYQ +EA FIP+ DT NF+ +EE + + + K G
Sbjct: 286 NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVXINEKCG 337
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + TG+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+PGG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + TG+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+PGG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 209/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 183 TDFGFAKRVKGRT--------------------------------------------WXL 198
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 209/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+PGG+M + L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 184 TDFGFAKRVKGRT--------------------------------------------WXL 199
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + TG+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+PGG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 194/352 (55%), Gaps = 53/352 (15%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D FE + +G G+FG V + + TG+ YAMK L K ++++ Q+EH E+ +L V+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
+VKL SF+D+ LY++MEY+PGG+M + L R +E ARFY A+ VL E +H
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
I+RD+KP+NLL+D+ G+++++DFG K + T
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT------------------------- 181
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
++ GTP+Y+APE++L KGY DWW+LG ++YEM GYP
Sbjct: 182 -------------------WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 222
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIK 412
PF++D P+ KIV+ + ++FP + S + KDL+ LL ++ +R G G ++IK
Sbjct: 223 PFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIK 278
Query: 413 VHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
H WF DW IYQ +EA FIP+ DT NF+ +EE + + + K G
Sbjct: 279 NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 330
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 209/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NL++D+ G++++
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 183 TDFGFAKRVKGRT--------------------------------------------WXL 198
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + TG+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ ++EH E+ +L V+ +VKL SF+D+ LY++MEY PGG+M +
Sbjct: 71 MKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NL++D+ G+++++DFGL K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 209/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NL++D+ G++++
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQV 182
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 183 TDFGFAKRVKGRT--------------------------------------------WXL 198
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 24 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 83
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 84 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+ GG+M + L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 144 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 203
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + +T ++
Sbjct: 204 TDFGFAKRVKGAT--------------------------------------------WTL 219
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 277
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 278 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 335
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 336 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 365
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + TG+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ ++EH E+ +L V+ +VKL SF+D+ LY++MEY PGG+M +
Sbjct: 71 MKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NL++D+ G+++++DFGL K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLAGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 208/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
PGG+M + L R E ARFY A+ VL E +H I+RD+KP+NL++D+ G++++
Sbjct: 123 APGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 183 TDFGFAKRVKGRT--------------------------------------------WXL 198
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + K TG+ YA
Sbjct: 12 EQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYA 71
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ + V+ +VKL SF+D+ LY+++EY PGG+M +
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS 131
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 132 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR 191
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 192 VKGRT--------------------------------------------WXLCGTPEYLA 207
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 263
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 323
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 324 DTSNFDDYEEEEIRVXINEKCG 345
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 209/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLXGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 208/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ + KL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
PGG+M + L R +E ARFY A+ VL E +H I+RD+KP+NL++D+ G++++
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 184 TDFGFAKRVKGRT--------------------------------------------WXL 199
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 12 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 71
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 131
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 132 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 192 VKGRT--------------------------------------------WXLCGTPEYLA 207
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 263
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 323
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 324 DTSNFDDYEEEEIRVXINEKCG 345
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 206/382 (53%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + TG+ YA
Sbjct: 12 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYA 71
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ + KL SF+D+ LY++MEY PGG+M +
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS 131
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NL++D+ G+++++DFG K
Sbjct: 132 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 192 VKGRT--------------------------------------------WXLCGTPEYLA 207
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 263
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 323
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 324 DTSNFDDYEEEEIRVXINEKCG 345
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D FE + +G G+FG V + + TG+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 209/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAACKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+ GG+M + L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 183 TDFGFAKRVKGRT--------------------------------------------WXL 198
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 207/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
TG+ YAMK L K ++++ Q+EH E+ +L V+ + KL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
PGG+M + L R E ARFY A+ VL E +H I+RD+KP+NL++D+ G++++
Sbjct: 124 APGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 184 TDFGFAKRVKGRT--------------------------------------------WXL 199
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++Y+M GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 6 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 65
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 66 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 125
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 126 HLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 185
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 186 VKGRT--------------------------------------------WXLCGTPEYLA 201
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 257
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 258 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 317
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 318 DTSNFDDYEEEEIRVXINEKCG 339
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 208/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NL++D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE+++ KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVSINEKCG 344
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 208/390 (53%), Gaps = 57/390 (14%)
Query: 82 ADADVSEEDQNNLLKFLEKKETEYMR----LQRHKMGADDFELLTMIGKGAFGEVRVCRE 137
A A +Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 24 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 83
Query: 138 KTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEY 197
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 84 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+ GG+M + L R E ARFY A+ VL E +H I+RD+KP+NLL+D+ G++++
Sbjct: 144 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 203
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
+DFG K + T +
Sbjct: 204 TDFGFAKRVKGRT--------------------------------------------WXL 219
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLK 377
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 277
Query: 378 FPEEAKLSIEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAF 432
FP + S + KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA F
Sbjct: 278 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 335
Query: 433 IPEVNDELDTQNFEKFEESDNQTKTSSKTG 462
IP+ DT NF+ +EE + + K G
Sbjct: 336 IPKFKGPGDTSNFDDYEEEEIAVSINEKCG 365
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 201/371 (54%), Gaps = 57/371 (15%)
Query: 97 FLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLR 156
FL+K ET ++ D F+ + +G G+FG V + + K +G+ YAMK L K ++++
Sbjct: 13 FLKKWETP----SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 68
Query: 157 RGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED 216
Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M + L R +E
Sbjct: 69 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 128
Query: 217 EARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDF 276
ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K + T
Sbjct: 129 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT------ 182
Query: 277 TIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGM 336
+ GTP+Y+APE++L KGY
Sbjct: 183 --------------------------------------WXLCGTPEYLAPEIILSKGYNK 204
Query: 337 ECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL 396
DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S + KDL+ LL
Sbjct: 205 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLL 260
Query: 397 -CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEKFEES 451
++ +R G G ++IK H WF DW IYQ +EA FIP+ DT NF+ +EE
Sbjct: 261 QVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 320
Query: 452 DNQTKTSSKTG 462
+ + + K G
Sbjct: 321 EIRVXINEKCG 331
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
P ++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ + G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+ +A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEALA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT NF+ +EE + + + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 207/382 (54%), Gaps = 57/382 (14%)
Query: 90 DQNNLLKFLEKKETEYMRL----QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+Q ++ +FL K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT 205
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
L R +E ARFY A+ VL E +H I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ T + GTP+Y+A
Sbjct: 191 VKGRT--------------------------------------------WXLCGTPEYLA 206
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLS 385
PE++L KGY DWW+LG ++YEM GYPPF++D P+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 262
Query: 386 IEAKDLISKLL-CNVNQRLG--AKGADEIKVHPWFDGVDWARIYQ--MEAAFIPEVNDEL 440
+ KDL+ LL ++ +R G G ++IK H WF DW IYQ +EA FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 441 DTQNFEKFEESDNQTKTSSKTG 462
DT N + +EE + + + K G
Sbjct: 323 DTSNADDYEEEEIRVXINEKCG 344
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 186/347 (53%), Gaps = 54/347 (15%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K DF++L +G G+FG V + R + G YAMK LKK ++R QVEH ER +L+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
V I++++ +FQD + +++IM+Y+ GG++ +LL + A+FY AE LA+E
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H I+RD+KP+N+LLDK GH++++DFG K
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHIKITDFGFAK--------------------------- 154
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
P T Y GTPDYIAPEV+ K Y DWWS G ++YEML
Sbjct: 155 -YVPDVT----------------YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 197
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLG--AKGA 408
GY PFY + M T KI+N L+FP + + KDL+S+L+ +++QRLG G
Sbjct: 198 AGYTPFYDSNTMKTYEKILN--AELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGT 253
Query: 409 DEIKVHPWFDGVDWARIYQ--MEAAFIPEVND-ELDTQNFEKFEESD 452
+++K HPWF V W ++ +E + P + + DT F+K+ E D
Sbjct: 254 EDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEED 300
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 188/344 (54%), Gaps = 54/344 (15%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKT---TGHVYAMKKLKKSEMLRRGQ-VEHVRAER 167
K+ + FELL ++GKG +G+V R+ T TG ++AMK LKK+ ++R + H +AER
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
N+L EV IV L +FQ LYLI+EYL GG++ L R+ ED A FY+AE +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
A+ +H+ I+RD+KP+N++L+ GH++L+DFGLCK ++ + T
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVT---------- 178
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
++ GT +Y+APE+L++ G+ DWWSLGA+M
Sbjct: 179 ---------------------------HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211
Query: 348 YEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAK 406
Y+ML G PPF ++ T KI+ + +L L+ EA+DL+ KLL N RLGA
Sbjct: 212 YDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAG 267
Query: 407 GAD--EIKVHPWFDGVDWARIY--QMEAAFIPEVNDELDTQNFE 446
D E++ HP+F ++W + ++E F P + E D F+
Sbjct: 268 PGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 187/344 (54%), Gaps = 54/344 (15%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKT---TGHVYAMKKLKKSEMLRRGQ-VEHVRAER 167
K+ + FELL ++GKG +G+V R+ T TG ++AMK LKK+ ++R + H +AER
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
N+L EV IV L +FQ LYLI+EYL GG++ L R+ ED A FY+AE +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
A+ +H+ I+RD+KP+N++L+ GH++L+DFGLCK ++ + T
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVT---------- 178
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
+ GT +Y+APE+L++ G+ DWWSLGA+M
Sbjct: 179 ---------------------------HXFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211
Query: 348 YEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAK 406
Y+ML G PPF ++ T KI+ + +L L+ EA+DL+ KLL N RLGA
Sbjct: 212 YDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAG 267
Query: 407 GAD--EIKVHPWFDGVDWARIY--QMEAAFIPEVNDELDTQNFE 446
D E++ HP+F ++W + ++E F P + E D F+
Sbjct: 268 PGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 195/352 (55%), Gaps = 54/352 (15%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKT---TGHVYAMKKLKKSEMLRRGQ 159
T +++ K FELL ++G+G+FG+V + R+ T +GH+YAMK LKK+ + R +
Sbjct: 15 THHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR 74
Query: 160 VEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEAR 219
V + ER++LA+V+ +VKL+ +FQ + LYLI+++L GGD+ T L ++ TE++ +
Sbjct: 75 VR-TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 133
Query: 220 FYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIG 279
FY+AE L ++ +H I+RD+KP+N+LLD+ GH++L+DFGL K
Sbjct: 134 FYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------------- 178
Query: 280 NNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 339
E + H +K AYS GT +Y+APEV+ ++G+ D
Sbjct: 179 ---------------------EAIDHEKK-----AYSFCGTVEYMAPEVVNRQGHSHSAD 212
Query: 340 WWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-N 398
WWS G +M+EML G PF D T I+ + L P+ LS EA+ L+ L N
Sbjct: 213 WWSYGVLMFEMLTGSLPFQGKDRKETMTLIL--KAKLGMPQ--FLSTEAQSLLRALFKRN 268
Query: 399 VNQRLGA--KGADEIKVHPWFDGVDWARIYQMEA--AFIPEVNDELDTQNFE 446
RLG+ GA+EIK H ++ +DW ++Y+ E F P V DT F+
Sbjct: 269 PANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFD 320
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 180/346 (52%), Gaps = 55/346 (15%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+H++ ++FE L ++GKG FG+V + +EK TG YAMK LKK ++ + +V H E +
Sbjct: 142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
L + L SFQ + L +MEY GG++ L R+ +ED ARFY AE V A+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 261
Query: 230 ESIH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP--LDCSTLQEQDFTIGNNLNGSS 286
+ +H + + ++RD+K +NL+LDK GH++++DFGLCK D +T++
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK-------------- 307
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+ GTP+Y+APEVL YG DWW LG +
Sbjct: 308 -----------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGA 405
MYEM+ G PFY+ D I+ ++FP L EAK L+S LL + QRLG
Sbjct: 339 MYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG 394
Query: 406 KGAD--EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEK 447
D EI H +F G+ W +Y+ + F P+V E DT+ F++
Sbjct: 395 GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 180/346 (52%), Gaps = 55/346 (15%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+H++ ++FE L ++GKG FG+V + +EK TG YAMK LKK ++ + +V H E +
Sbjct: 145 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
L + L SFQ + L +MEY GG++ L R+ +ED ARFY AE V A+
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 264
Query: 230 ESIH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP--LDCSTLQEQDFTIGNNLNGSS 286
+ +H + + ++RD+K +NL+LDK GH++++DFGLCK D +T++
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK-------------- 310
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+ GTP+Y+APEVL YG DWW LG +
Sbjct: 311 -----------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 341
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGA 405
MYEM+ G PFY+ D I+ ++FP L EAK L+S LL + QRLG
Sbjct: 342 MYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG 397
Query: 406 KGAD--EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEK 447
D EI H +F G+ W +Y+ + F P+V E DT+ F++
Sbjct: 398 GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 443
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 191/353 (54%), Gaps = 56/353 (15%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTG----HVYAMKKLKKSEMLRRG 158
T +++ K FELL ++G+G+FG+V + + K +G +YAMK LKK+ + R
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 69
Query: 159 QVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA 218
+V + ER++L EV+ IVKL+ +FQ + LYLI+++L GGD+ T L ++ TE++
Sbjct: 70 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Query: 219 RFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTI 278
+FY+AE LA++ +H I+RD+KP+N+LLD+ GH++L+DFGL K
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------------- 174
Query: 279 GNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 338
E + H +K AYS GT +Y+APEV+ ++G+
Sbjct: 175 ----------------------ESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSA 207
Query: 339 DWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC- 397
DWWS G +M+EML G PF D T I+ + L P+ LS EA+ L+ L
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQ--FLSPEAQSLLRMLFKR 263
Query: 398 NVNQRLGA--KGADEIKVHPWFDGVDWARIYQMEA--AFIPEVNDELDTQNFE 446
N RLGA G +EIK H +F +DW ++Y+ E F P DT F+
Sbjct: 264 NPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFD 316
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 177/342 (51%), Gaps = 50/342 (14%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
R K+ +DF+ L ++GKG FG+V + REK TG YAMK L+K ++ + +V H E +
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
L + L +FQ + L +MEY GG++ L R+ TE+ ARFY AE V A+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
E +H ++RDIK +NL+LDK GH++++DFGLCK + + G +
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK------ 166
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
+ GTP+Y+APEVL YG DWW LG +MYE
Sbjct: 167 --------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 200
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGA 408
M+ G PFY+ D I+ ++FP LS EAK L++ LL + QRLG +
Sbjct: 201 MMCGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPS 256
Query: 409 D--EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFE 446
D E+ H +F ++W + Q + F P+V E+DT+ F+
Sbjct: 257 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 298
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 176/340 (51%), Gaps = 50/340 (14%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K+ +DF+ L ++GKG FG+V + REK TG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L +FQ + L +MEY GG++ L R+ TE+ ARFY AE V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H ++RDIK +NL+LDK GH++++DFGLCK + + G +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 163
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 164 ------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD- 409
G PFY+ D I+ ++FP LS EAK L++ LL + QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 410 -EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFE 446
E+ H +F ++W + Q + F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 185/334 (55%), Gaps = 54/334 (16%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTG----HVYAMKKLKKSEMLRRG 158
T +++ K FELL ++G+G+FG+V + + K +G +YAMK LKK+ + R
Sbjct: 12 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 70
Query: 159 QVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA 218
+V + ER++L EV+ IVKL+ +FQ + LYLI+++L GGD+ T L ++ TE++
Sbjct: 71 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 129
Query: 219 RFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTI 278
+FY+AE LA++ +H I+RD+KP+N+LLD+ GH++L+DFGL K
Sbjct: 130 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------------- 175
Query: 279 GNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 338
E + H +K AYS GT +Y+APEV+ ++G+
Sbjct: 176 ----------------------ESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSA 208
Query: 339 DWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC- 397
DWWS G +M+EML G PF D T I+ + L P+ LS EA+ L+ L
Sbjct: 209 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQF--LSPEAQSLLRMLFKR 264
Query: 398 NVNQRLGAK--GADEIKVHPWFDGVDWARIYQME 429
N RLGA G +EIK H +F +DW ++Y+ E
Sbjct: 265 NPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 298
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 193/391 (49%), Gaps = 65/391 (16%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K+ +DFEL M+GKG+FG+V + K T +A+K LKK +L VE E+ +L+
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 172 EV-DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+ + ++C+FQ E L+ +MEYL GGD+M + A FY AE +L ++
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+H ++RD+K DN+LLDK GH++++DFG+CK N+ G ++ NE
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK---------------ENMLGDAKTNE 178
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
GTPDYIAPE+LL + Y DWWS G ++YEM
Sbjct: 179 --------------------------FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 212
Query: 351 LVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK-LSIEAKDLISKLLCN-VNQRLGAKGA 408
L+G PF+ D I + P + L EAKDL+ KL +RLG +G
Sbjct: 213 LIGQSPFHGQDEEELFHSI-----RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG- 266
Query: 409 DEIKVHPWFDGVDWARI--YQMEAAFIPEVNDELDTQNFEKFEESDNQTKTSSKTGPWRK 466
+I+ HP F ++W + +++ F P+V D NF+K E N+ R
Sbjct: 267 -DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK--EFLNEKPRLXFAD--RA 321
Query: 467 MLSSKDINFVGYTYKNFEIVNDYQVPGMAEL 497
+++S D N ++NF +N PGM L
Sbjct: 322 LINSMDQN----MFRNFXFMN----PGMERL 344
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 185/334 (55%), Gaps = 54/334 (16%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTG----HVYAMKKLKKSEMLRRG 158
T +++ K FELL ++G+G+FG+V + + K +G +YAMK LKK+ + R
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 69
Query: 159 QVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA 218
+V + ER++L EV+ IVKL+ +FQ + LYLI+++L GGD+ T L ++ TE++
Sbjct: 70 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Query: 219 RFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTI 278
+FY+AE LA++ +H I+RD+KP+N+LLD+ GH++L+DFGL K
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------------- 174
Query: 279 GNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 338
E + H +K AYS GT +Y+APEV+ ++G+
Sbjct: 175 ----------------------ESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSA 207
Query: 339 DWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC- 397
DWWS G +M+EML G PF D T I+ + L P+ LS EA+ L+ L
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQF--LSPEAQSLLRMLFKR 263
Query: 398 NVNQRLGAK--GADEIKVHPWFDGVDWARIYQME 429
N RLGA G +EIK H +F +DW ++Y+ E
Sbjct: 264 NPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 176/340 (51%), Gaps = 50/340 (14%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K+ +DF+ L ++GKG FG+V + REK TG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L +FQ + L +MEY GG++ L R+ TE+ ARFY AE V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H ++RDIK +NL+LDK GH++++DFGLCK + + G +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 163
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 164 ------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD- 409
G PFY+ D I+ ++FP LS EAK L++ LL + QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 410 -EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFE 446
E+ H +F ++W + Q + F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 175/340 (51%), Gaps = 50/340 (14%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K+ +DF+ L ++GKG FG+V + REK TG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L +FQ + L +MEY GG++ L R+ TE+ ARFY AE V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H ++RDIK +NL+LDK GH++++DFGLCK + + G +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 163
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 164 ------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD- 409
G PFY+ D I+ ++FP LS EAK L++ LL + QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 410 -EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFE 446
E+ H +F ++W + Q + F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 189/346 (54%), Gaps = 52/346 (15%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKT---TGHVYAMKKLKKSEMLRRGQV-EHVRAER 167
K+G ++FELL ++G GA+G+V + R+ + TG +YAMK LKK+ ++++ + EH R ER
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 168 NLLAEV-DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETV 226
+L + S +V L+ +FQ + L+LI++Y+ GG++ T L +++ TE E + YV E V
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV 169
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
LA+E +HK I+RDIK +N+LLD GH+ L+DFGL K +
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF------------------VA 211
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL--KKGYGMECDWWSLG 344
ER AY GT +Y+AP+++ G+ DWWSLG
Sbjct: 212 DETER----------------------AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 345 AIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRL 403
+MYE+L G PF D ++ +I + P ++S AKDLI +LL + +RL
Sbjct: 250 VLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 309
Query: 404 GA--KGADEIKVHPWFDGVDWARIY--QMEAAFIPEVNDELDTQNF 445
G + ADEIK H +F ++W + ++ A F P + DELD NF
Sbjct: 310 GCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 175/340 (51%), Gaps = 50/340 (14%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K+ +DF+ L ++GKG FG+V + REK TG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L +FQ + L +MEY GG++ L R+ TE+ ARFY AE V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H ++RDIK +NL+LDK GH++++DFGLCK + + G +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 163
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 164 ------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD- 409
G PFY+ D I+ ++FP LS EAK L++ LL + QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 410 -EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFE 446
E+ H +F ++W + Q + F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 175/340 (51%), Gaps = 50/340 (14%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K+ +DF+ L ++GKG FG+V + REK TG YAMK L+K ++ + +V H E +L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L +FQ + L +MEY GG++ L R+ TE+ ARFY AE V A+E
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H ++RDIK +NL+LDK GH++++DFGLCK + + G +
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 168
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 169 ------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD- 409
G PFY+ D I+ ++FP LS EAK L++ LL + QRLG +D
Sbjct: 205 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 260
Query: 410 -EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFE 446
E+ H +F ++W + Q + F P+V E+DT+ F+
Sbjct: 261 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 300
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 175/340 (51%), Gaps = 50/340 (14%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K+ +DF+ L ++GKG FG+V + REK TG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L +FQ + L +MEY GG++ L R+ TE+ ARFY AE V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H ++RDIK +NL+LDK GH++++DFGLCK + + G +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 163
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 164 ------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD- 409
G PFY+ D I+ ++FP LS EAK L++ LL + QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 410 -EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFE 446
E+ H +F ++W + Q + F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 192/391 (49%), Gaps = 65/391 (16%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
K+ +DF L M+GKG+FG+V + K T +A+K LKK +L VE E+ +L+
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 172 EV-DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+ + ++C+FQ E L+ +MEYL GGD+M + A FY AE +L ++
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+H ++RD+K DN+LLDK GH++++DFG+CK N+ G ++ N
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK---------------ENMLGDAKTN- 176
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
GTPDYIAPE+LL + Y DWWS G ++YEM
Sbjct: 177 -------------------------XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 211
Query: 351 LVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK-LSIEAKDLISKLLCN-VNQRLGAKGA 408
L+G PF+ D I + P + L EAKDL+ KL +RLG +G
Sbjct: 212 LIGQSPFHGQDEEELFHSI-----RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG- 265
Query: 409 DEIKVHPWFDGVDWARI--YQMEAAFIPEVNDELDTQNFEKFEESDNQTKTSSKTGPWRK 466
+I+ HP F ++W + +++ F P+V D NF+K E N+ S R
Sbjct: 266 -DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK--EFLNEKPRLSFAD--RA 320
Query: 467 MLSSKDINFVGYTYKNFEIVNDYQVPGMAEL 497
+++S D N ++NF +N PGM L
Sbjct: 321 LINSMDQN----MFRNFXFMN----PGMERL 343
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 177/344 (51%), Gaps = 55/344 (15%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
++ ++FE L ++GKG FG+V + +EK TG YAMK LKK ++ + +V H E +L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L SFQ + L +MEY GG++ L R+ +ED ARFY AE V A++
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 232 IH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP--LDCSTLQEQDFTIGNNLNGSSQN 288
+H + + ++RD+K +NL+LDK GH++++DFGLCK D +T++
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK---------------- 168
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
GTP+Y+APEVL YG DWW LG +MY
Sbjct: 169 ---------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 201
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
EM+ G PFY+ D I+ ++FP L EAK L+S LL + QRLG
Sbjct: 202 EMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGS 257
Query: 408 AD--EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEK 447
D EI H +F G+ W +Y+ + F P+V E DT+ F++
Sbjct: 258 EDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 301
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 177/344 (51%), Gaps = 55/344 (15%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
++ ++FE L ++GKG FG+V + +EK TG YAMK LKK ++ + +V H E +L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L SFQ + L +MEY GG++ L R+ +ED ARFY AE V A++
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 232 IH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP--LDCSTLQEQDFTIGNNLNGSSQN 288
+H + + ++RD+K +NL+LDK GH++++DFGLCK D +T++
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK---------------- 167
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
GTP+Y+APEVL YG DWW LG +MY
Sbjct: 168 ---------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 200
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
EM+ G PFY+ D I+ ++FP L EAK L+S LL + QRLG
Sbjct: 201 EMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGS 256
Query: 408 AD--EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEK 447
D EI H +F G+ W +Y+ + F P+V E DT+ F++
Sbjct: 257 EDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 300
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 177/344 (51%), Gaps = 55/344 (15%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
++ ++FE L ++GKG FG+V + +EK TG YAMK LKK ++ + +V H E +L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ L SFQ + L +MEY GG++ L R+ +ED ARFY AE V A++
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 232 IH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP--LDCSTLQEQDFTIGNNLNGSSQN 288
+H + + ++RD+K +NL+LDK GH++++DFGLCK D +T++
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK---------------- 169
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
GTP+Y+APEVL YG DWW LG +MY
Sbjct: 170 ---------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 202
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
EM+ G PFY+ D I+ ++FP L EAK L+S LL + QRLG
Sbjct: 203 EMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGS 258
Query: 408 AD--EIKVHPWFDGVDWARIYQ--MEAAFIPEVNDELDTQNFEK 447
D EI H +F G+ W +Y+ + F P+V E DT+ F++
Sbjct: 259 EDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 302
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 175/335 (52%), Gaps = 50/335 (14%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-LLAEVDS 175
DF L +IGKG+FG+V + R K YA+K L+K +L++ + +H+ +ERN LL V
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
+V L+ SFQ + LY +++Y+ GG++ L R+ E ARFY AE A+ +H
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
+ ++RD+KP+N+LLD GH+ L+DFGLCK
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCK------------------------------- 187
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
E ++H + GTP+Y+APEVL K+ Y DWW LGA++YEML G P
Sbjct: 188 -----ENIEHNSTTS-----TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAK-GADEIKV 413
PFYS + I+N LK ++ A+ L+ LL + +RLGAK EIK
Sbjct: 238 PFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKS 293
Query: 414 HPWFDGVDWARIY--QMEAAFIPEVNDELDTQNFE 446
H +F ++W + ++ F P V+ D ++F+
Sbjct: 294 HVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFD 328
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 177/343 (51%), Gaps = 52/343 (15%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLL 170
+++G D+FE + ++GKG+FG+V + R K TG +YA+K LKK +L+ VE E+ +L
Sbjct: 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRIL 77
Query: 171 AEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
+ ++ + +L+C FQ + L+ +ME++ GGD+M + + E ARFY AE + A+
Sbjct: 78 SLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISAL 137
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+H I+RD+K DN+LLD GH +L+DFG+CK C+ + F
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC------------ 185
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
GTPDYIAPE+L + YG DWW++G ++YE
Sbjct: 186 -----------------------------GTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA--- 405
ML G+ PF +++ I+N + +P L +A ++ + N RLG+
Sbjct: 217 MLCGHAPFEAENEDDLFEAILN--DEVVYP--TWLHEDATGILKSFMTKNPTMRLGSLTQ 272
Query: 406 KGADEIKVHPWFDGVDWARI--YQMEAAFIPEVNDELDTQNFE 446
G I HP+F +DWA++ Q+E F P + D NF+
Sbjct: 273 GGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFD 315
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 176/348 (50%), Gaps = 57/348 (16%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+G DF+LL +IG+G++ +V + R K T +YAM+ +KK + ++ V+ E+++ +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 173 VDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ +V L+ FQ + L+ ++EY+ GGD+M + R+ L E+ ARFY AE LA+
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H+ I+RD+K DN+LLD GH++L+D+G+CK R
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----------------------EGLR 205
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
P T GTP+YIAPE+L + YG DWW+LG +M+EM+
Sbjct: 206 PGDTTST------------------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 352 VGYPPF----YSDDPMSTCRKI---VNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRL 403
G PF SD+P V ++ P LS++A ++ L + +RL
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERL 305
Query: 404 GA---KGADEIKVHPWFDGVDWARIYQMEAA--FIPEVNDELDTQNFE 446
G G +I+ HP+F VDW + Q + F P ++ E NF+
Sbjct: 306 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 353
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 175/348 (50%), Gaps = 57/348 (16%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+G DF+LL +IG+G++ +V + R K T +YAMK +KK + ++ V+ E+++ +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 173 VDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ +V L+ FQ + L+ ++EY+ GGD+M + R+ L E+ ARFY AE LA+
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H+ I+RD+K DN+LLD GH++L+D+G+CK R
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----------------------EGLR 173
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
P GTP+YIAPE+L + YG DWW+LG +M+EM+
Sbjct: 174 PGDTTSX------------------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 215
Query: 352 VGYPPF----YSDDPMSTCRKI---VNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRL 403
G PF SD+P V ++ P +S++A ++ L + +RL
Sbjct: 216 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SMSVKAASVLKSFLNKDPKERL 273
Query: 404 GA---KGADEIKVHPWFDGVDWARIYQMEAA--FIPEVNDELDTQNFE 446
G G +I+ HP+F VDW + Q + F P ++ E NF+
Sbjct: 274 GCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 321
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 175/348 (50%), Gaps = 57/348 (16%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+G DF+LL +IG+G++ +V + R K T +YAMK +KK + ++ V+ E+++ +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 173 VDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ +V L+ FQ + L+ ++EY+ GGD+M + R+ L E+ ARFY AE LA+
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H+ I+RD+K DN+LLD GH++L+D+G+CK R
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----------------------EGLR 158
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
P GTP+YIAPE+L + YG DWW+LG +M+EM+
Sbjct: 159 PGDTTSX------------------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 352 VGYPPF----YSDDPMSTCRKI---VNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRL 403
G PF SD+P V ++ P LS++A ++ L + +RL
Sbjct: 201 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERL 258
Query: 404 GA---KGADEIKVHPWFDGVDWARIYQMEAA--FIPEVNDELDTQNFE 446
G G +I+ HP+F VDW + Q + F P ++ E NF+
Sbjct: 259 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 306
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 177/348 (50%), Gaps = 57/348 (16%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+G DF+LL +IG+G++ +V + R K T +YAMK +KK + ++ V+ E+++ +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 173 VDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ +V L+ FQ + L+ ++EY+ GGD+M + R+ L E+ ARFY AE LA+
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H+ I+RD+K DN+LLD GH++L+D+G+CK L+ D T
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTT-------------- 167
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
GTP+YIAPE+L + YG DWW+LG +M+EM+
Sbjct: 168 -----------------------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 352 VGYPPF----YSDDPMSTCRKI---VNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRL 403
G PF SD+P V ++ P LS++A ++ L + +RL
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERL 262
Query: 404 GAK---GADEIKVHPWFDGVDWARIYQMEAA--FIPEVNDELDTQNFE 446
G G +I+ HP+F VDW + Q + F P ++ E NF+
Sbjct: 263 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 310
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 191
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A S VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 192 ------------------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 233
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 234 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 289
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 290 KAHPFFESVTWENLHQ 305
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L +P
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVL---------------------------SP 181
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
+ Q A S VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 182 ESKQAR------------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 230 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 285
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 286 KAHPFFESVTWENLHQ 301
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 167/323 (51%), Gaps = 47/323 (14%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
Q K +DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER+
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 62
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+++ +D VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 122
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+E +H IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 123 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------- 168
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
A VGT Y++PE+L +K D W+LG I+Y
Sbjct: 169 -------------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 203
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA-- 405
+++ G PPF + + +KI+ + FPE K +A+DL+ KLL + +RLG
Sbjct: 204 QLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEE 259
Query: 406 -KGADEIKVHPWFDGVDWARIYQ 427
+G +K HP+F+ V W ++Q
Sbjct: 260 MEGYGPLKAHPFFESVTWENLHQ 282
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 167/323 (51%), Gaps = 47/323 (14%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
Q K +DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER+
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 61
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+++ +D VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 121
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+E +H IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 122 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------- 167
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
A VGT Y++PE+L +K D W+LG I+Y
Sbjct: 168 -------------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 202
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA-- 405
+++ G PPF + + +KI+ + FPE K +A+DL+ KLL + +RLG
Sbjct: 203 QLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEE 258
Query: 406 -KGADEIKVHPWFDGVDWARIYQ 427
+G +K HP+F+ V W ++Q
Sbjct: 259 MEGYGPLKAHPFFESVTWENLHQ 281
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 165/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G ++ + + + E RFY AE V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A S VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLP 232
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 188
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A + VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 189 ------------------ANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 231 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 287 KAHPFFESVTWENLHQ 302
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 167/323 (51%), Gaps = 47/323 (14%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
Q K +DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER+
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+++ +D VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 120
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+E +H IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------- 166
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
A VGT Y++PE+L +K D W+LG I+Y
Sbjct: 167 -------------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 201
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA-- 405
+++ G PPF + + +KI+ + FPE K +A+DL+ KLL + +RLG
Sbjct: 202 QLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEE 257
Query: 406 -KGADEIKVHPWFDGVDWARIYQ 427
+G +K HP+F+ V W ++Q
Sbjct: 258 MEGYGPLKAHPFFESVTWENLHQ 280
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 188
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 189 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 231 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 287 KAHPFFESVTWENLHQ 302
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 188
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 189 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 231 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 287 KAHPFFESVTWENLHQ 302
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 191
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 192 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 233
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 234 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 289
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 290 KAHPFFESVTWENLHQ 305
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 165
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 166 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 207
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 208 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 263
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 264 KAHPFFESVTWENLHQ 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L +P
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVL---------------------------SP 181
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
+ Q A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 182 ESKQAR------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 230 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 285
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 286 KAHPFFESVTWENLHQ 301
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 164/316 (51%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLP 232
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEGLIFAKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L +P
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVL---------------------------SP 166
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
+ Q A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 167 ESKQAR------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 214
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 215 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 270
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 271 KAHPFFESVTWENLHQ 286
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 164/316 (51%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 195
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 196 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 237
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 238 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 293
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 294 KAHPFFESVTWENLHQ 309
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 164/316 (51%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEGLIFAKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 164/316 (51%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 188
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 189 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FPE K +A+DL+ KLL + +RLG +G +
Sbjct: 231 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 287 KAHPFFESVTWENLHQ 302
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 164/316 (51%), Gaps = 47/316 (14%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF+ ++G+G+F V + RE T YA+K L+K +++ +V +V ER++++ +D
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
VKLY +FQDDE LY + Y G+++ + + + E RFY AE V A+E +H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KP+N+LL++ H++++DFG K L + Q +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 193
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 194 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 235
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA---KGADEI 411
PF + + +KI+ + FP A +A+DL+ KLL + +RLG +G +
Sbjct: 236 PFRAGNEYLIFQKII--KLEYDFP--AAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 291
Query: 412 KVHPWFDGVDWARIYQ 427
K HP+F+ V W ++Q
Sbjct: 292 KAHPFFESVTWENLHQ 307
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 191/379 (50%), Gaps = 59/379 (15%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD-S 175
DF L ++GKG+FG+V + K T +YA+K LKK +++ VE E+ +LA +D
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
+ +L+ FQ + LY +MEY+ GGD+M + + E +A FY AE + + +HK
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
I+RD+K DN++LD GH++++DFG+CK + ++F
Sbjct: 140 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC------------------ 181
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
GTPDYIAPE++ + YG DWW+ G ++YEML G P
Sbjct: 182 -----------------------GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQP 218
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA--KGADEIK 412
PF +D + I+ ++ +P+ LS EA + L+ + +RLG +G +++
Sbjct: 219 PFDGEDEDELFQSIM--EHNVSYPK--SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVR 274
Query: 413 VHPWFDGVDWARI--YQMEAAFIPEVNDELDTQNFEKFEESDNQTKTSSKTGPWRKMLSS 470
H +F +DW ++ +++ F P+V + +NF+KF T+ P +++ +
Sbjct: 275 EHAFFRRIDWEKLENREIQPPFKPKVCGK-GAENFDKF-----FTRGQPVLXPPDQLVIA 328
Query: 471 K--DINFVGYTYKNFEIVN 487
+F G+ Y N + V+
Sbjct: 329 NIDQSDFEGFXYVNPQFVH 347
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 172/345 (49%), Gaps = 52/345 (15%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
R +M DF L ++GKG+FG+V + K T +YA+K LKK +++ VE E+ +
Sbjct: 335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 394
Query: 170 LA-EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
LA + +L+ FQ + LY +MEY+ GGD+M + + E A FY AE +
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 454
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ + I+RD+K DN++LD GH++++DFG+CK N +G +
Sbjct: 455 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE--------------NIWDGVTTK 500
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
GTPDYIAPE++ + YG DWW+ G ++Y
Sbjct: 501 ---------------------------XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 533
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA-- 405
EML G PF +D + I+ ++ +P+ +S EA + L+ + +RLG
Sbjct: 534 EMLAGQAPFEGEDEDELFQSIM--EHNVAYPKS--MSKEAVAICKGLMTKHPGKRLGCGP 589
Query: 406 KGADEIKVHPWFDGVDWARI--YQMEAAFIPEVNDELDTQNFEKF 448
+G +IK H +F +DW ++ +++ + P+ + + +NF++F
Sbjct: 590 EGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDRF 633
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 171/345 (49%), Gaps = 52/345 (15%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
R +M DF L ++GKG+FG+V + K T +YA+K LKK +++ VE E+ +
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 73
Query: 170 LA-EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
LA + +L+ FQ + LY +MEY+ GGD+M + + E A FY AE +
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 133
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ + I+RD+K DN++LD GH++++DFG+CK N +G +
Sbjct: 134 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE--------------NIWDGVTTK 179
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
GTPDYIAPE++ + YG DWW+ G ++Y
Sbjct: 180 ---------------------------XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 212
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGA-- 405
EML G PF +D + I+ ++ +P+ +S EA + L+ + +RLG
Sbjct: 213 EMLAGQAPFEGEDEDELFQSIM--EHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGP 268
Query: 406 KGADEIKVHPWFDGVDWARI--YQMEAAFIPEVNDELDTQNFEKF 448
+G +IK H +F +DW ++ +++ + P+ + +NF++F
Sbjct: 269 EGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRF 312
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 179/357 (50%), Gaps = 63/357 (17%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEM-LRRGQVEHV--RAERNL 169
+ +DF + +IG+G FGEV CR+ TG +YAMK L K + +++G+ + R +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
++ D IV + +F + L I++ + GGD+ L + +E + RFY AE +L +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
E +H ++RD+KP N+LLD++GH+R+SD GL C DF+
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C------DFS-----------K 344
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMY 348
++P +++VGT Y+APEVL K Y DW+SLG +++
Sbjct: 345 KKP----------------------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 349 EMLVGYPPFY---SDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLG 404
++L G+ PF + D R + L P+ S E + L+ LL +VN+RLG
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL--PD--SFSPELRSLLEGLLQRDVNRRLG 438
Query: 405 --AKGADEIKVHPWFDGVDWARIY--QMEAAFIP---EVNDELDTQNFEKFEESDNQ 454
+GA E+K P+F +DW ++ + IP EVN D + F+E D +
Sbjct: 439 CLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVN-AADAFDIGSFDEEDTK 494
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 179/357 (50%), Gaps = 63/357 (17%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEM-LRRGQVEHV--RAERNL 169
+ +DF + +IG+G FGEV CR+ TG +YAMK L K + +++G+ + R +L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
++ D IV + +F + L I++ + GGD+ L + +E + RFY AE +L +
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
E +H ++RD+KP N+LLD++GH+R+SD GL C DF+
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C------DFS-----------K 343
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMY 348
++P +++VGT Y+APEVL K Y DW+SLG +++
Sbjct: 344 KKP----------------------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 381
Query: 349 EMLVGYPPFY---SDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLG 404
++L G+ PF + D R + L P+ S E + L+ LL +VN+RLG
Sbjct: 382 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL--PD--SFSPELRSLLEGLLQRDVNRRLG 437
Query: 405 --AKGADEIKVHPWFDGVDWARIY--QMEAAFIP---EVNDELDTQNFEKFEESDNQ 454
+GA E+K P+F +DW ++ + IP EVN D + F+E D +
Sbjct: 438 CLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVN-AADAFDIGSFDEEDTK 493
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 179/357 (50%), Gaps = 63/357 (17%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEM-LRRGQVEHV--RAERNL 169
+ +DF + +IG+G FGEV CR+ TG +YAMK L K + +++G+ + R +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
++ D IV + +F + L I++ + GGD+ L + +E + RFY AE +L +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
E +H ++RD+KP N+LLD++GH+R+SD GL C DF+
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C------DFS-----------K 344
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMY 348
++P +++VGT Y+APEVL K Y DW+SLG +++
Sbjct: 345 KKP----------------------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 349 EMLVGYPPFY---SDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLG 404
++L G+ PF + D R + L P+ S E + L+ LL +VN+RLG
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL--PD--SFSPELRSLLEGLLQRDVNRRLG 438
Query: 405 --AKGADEIKVHPWFDGVDWARIY--QMEAAFIP---EVNDELDTQNFEKFEESDNQ 454
+GA E+K P+F +DW ++ + IP EVN D + F+E D +
Sbjct: 439 CLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAA-DAFDIGSFDEEDTK 494
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 179/357 (50%), Gaps = 63/357 (17%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEM-LRRGQVEHV--RAERNL 169
+ +DF + +IG+G FGEV CR+ TG +YAMK L K + +++G+ + R +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
++ D IV + +F + L I++ + GGD+ L + +E + RFY AE +L +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
E +H ++RD+KP N+LLD++GH+R+SD GL C DF+
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C------DFS-----------K 344
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMY 348
++P +++VGT Y+APEVL K Y DW+SLG +++
Sbjct: 345 KKP----------------------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 349 EMLVGYPPFY---SDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLG 404
++L G+ PF + D R + L P+ S E + L+ LL +VN+RLG
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL--PD--SFSPELRSLLEGLLQRDVNRRLG 438
Query: 405 --AKGADEIKVHPWFDGVDWARIY--QMEAAFIP---EVNDELDTQNFEKFEESDNQ 454
+GA E+K P+F +DW ++ + IP EVN D + F+E D +
Sbjct: 439 CLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAA-DAFDIGSFDEEDTK 494
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 162/326 (49%), Gaps = 53/326 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D FE+L IGKG+FG+V + ++ T +YAMK + K + + R +V +V E ++ ++
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
+V L+ SFQD+E ++++++ L GGD+ L + E+ + ++ E V+A++ +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+KPDN+LLD++GH+ ++DF + L P
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAML----------------------------P 166
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK---GYGMECDWWSLGAIMYEMLV 352
+ TQ + GT Y+APE+ + GY DWWSLG YE+L
Sbjct: 167 RETQ--------------ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 353 GYPPFYSDDPMSTCRKIVNWRTH-LKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADE 410
G P++ S+ + + T + +P + S E L+ KLL N +QR +
Sbjct: 213 GRRPYHIRSSTSSKEIVHTFETTVVTYP--SAWSQEMVSLLKKLLEPNPDQRFSQ--LSD 268
Query: 411 IKVHPWFDGVDWARIYQ--MEAAFIP 434
++ P+ + ++W ++Q + FIP
Sbjct: 269 VQNFPYMNDINWDAVFQKRLIPGFIP 294
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 179/381 (46%), Gaps = 67/381 (17%)
Query: 108 LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
L+R + + F ++GKG FGEV C+ + TG +YA KKL+K + +R E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAET 225
+L +V+S +V L +++ + L L++ + GGD+ + M + E A FY AE
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
+E +H+ ++RD+KP+N+LLD +GH+R+SD GL G + G
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL----------AVHVPEGQTIKGR 345
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
VGT Y+APEV+ + Y DWW+LG
Sbjct: 346 --------------------------------VGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQR 402
++YEM+ G PF R+ V R + PEE + S +A+ L S+LLC + +R
Sbjct: 374 LLYEMIAGQSPFQQRKKKIK-REEVE-RLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Query: 403 LGAKG--ADEIKVHPWFDGVDWARI--YQMEAAFIPE-----VNDELDTQNFE-----KF 448
LG +G A E+K HP F +++ R+ +E F P+ D LD + F +
Sbjct: 432 LGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVEL 491
Query: 449 EESDNQTKTSSKTG----PWR 465
E +D TG PW+
Sbjct: 492 EPTDQDFYQKFATGSVPIPWQ 512
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 179/381 (46%), Gaps = 67/381 (17%)
Query: 108 LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
L+R + + F ++GKG FGEV C+ + TG +YA KKL+K + +R E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAET 225
+L +V+S +V L +++ + L L++ + GGD+ + M + E A FY AE
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
+E +H+ ++RD+KP+N+LLD +GH+R+SD GL G + G
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL----------AVHVPEGQTIKGR 345
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
VGT Y+APEV+ + Y DWW+LG
Sbjct: 346 --------------------------------VGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQR 402
++YEM+ G PF R+ V R + PEE + S +A+ L S+LLC + +R
Sbjct: 374 LLYEMIAGQSPFQQRKKKIK-REEVE-RLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Query: 403 LGAKG--ADEIKVHPWFDGVDWARI--YQMEAAFIPE-----VNDELDTQNFE-----KF 448
LG +G A E+K HP F +++ R+ +E F P+ D LD + F +
Sbjct: 432 LGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVEL 491
Query: 449 EESDNQTKTSSKTG----PWR 465
E +D TG PW+
Sbjct: 492 EPTDQDFYQKFATGSVPIPWQ 512
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 151/315 (47%), Gaps = 51/315 (16%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH 162
T + + K DDF+++ +GKG FG V + REK + A+K L KS++ + G
Sbjct: 1 TALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 163 VRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYV 222
+R E + + + I+++Y F D + +YL++E+ P G++ L + E + ++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
E A+ H+ IHRDIKP+NLL+ G L+++DFG + +L+
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR---------- 168
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
RR + GT DY+ PE++ K + + D W
Sbjct: 169 ---------------------------RRXMC----GTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 343 LGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQ 401
G + YE LVG PPF S T R+IVN LKFP LS +KDLISKLL + Q
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQ 253
Query: 402 RLGAKGADEIKVHPW 416
RL KG E HPW
Sbjct: 254 RLPLKGVME---HPW 265
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 50/299 (16%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D I+KLY
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D + YL+ E GG++ ++ + +E +A + + + I +HK+ +HRD+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 243 KPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
KP+NLLL+ K ++R+ DFGL
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 199
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 359
H++ +++M +GT YIAPEV L Y +CD WS G I+Y +L G PPF
Sbjct: 200 ----THFEASKKM--KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNG 252
Query: 360 DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV-NQRLGAKGADEIKVHPWF 417
+ +K+ + + P+ K+S AKDLI K+L V + R+ A+ A + H W
Sbjct: 253 ANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD---HEWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 50/299 (16%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D I+KLY
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D + YL+ E GG++ ++ + +E +A + + + I +HK+ +HRD+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 243 KPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
KP+NLLL+ K ++R+ DFGL
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 200
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 359
H++ +++M +GT YIAPEV L Y +CD WS G I+Y +L G PPF
Sbjct: 201 ----THFEASKKM--KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNG 253
Query: 360 DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV-NQRLGAKGADEIKVHPWF 417
+ +K+ + + P+ K+S AKDLI K+L V + R+ A+ A + H W
Sbjct: 254 ANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD---HEWI 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 50/299 (16%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D I+KLY
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D + YL+ E GG++ ++ + +E +A + + + I +HK+ +HRD+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 243 KPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
KP+NLLL+ K ++R+ DFGL
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 176
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 359
H++ +++M +GT YIAPEV L Y +CD WS G I+Y +L G PPF
Sbjct: 177 ----THFEASKKM--KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNG 229
Query: 360 DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV-NQRLGAKGADEIKVHPWF 417
+ +K+ + + P+ K+S AKDLI K+L V + R+ A+ A + H W
Sbjct: 230 ANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD---HEWI 285
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 150/315 (47%), Gaps = 51/315 (16%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH 162
T + + K DDF++ +GKG FG V + REK + A+K L KS++ + G
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 163 VRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYV 222
+R E + + + I+++Y F D + +YL++E+ P G++ L + E + ++
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
E A+ H+ IHRDIKP+NLL+ G L+++DFG + +L+
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR---------- 169
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
RR + GT DY+ PE++ K + + D W
Sbjct: 170 ---------------------------RRXMC----GTLDYLPPEMIEGKTHDEKVDLWC 198
Query: 343 LGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQ 401
G + YE LVG PPF S T R+IVN LKFP LS +KDLISKLL + Q
Sbjct: 199 AGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQ 254
Query: 402 RLGAKGADEIKVHPW 416
RL KG E HPW
Sbjct: 255 RLPLKGVME---HPW 266
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 150/315 (47%), Gaps = 51/315 (16%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH 162
T + + K DDF++ +GKG FG V + REK + A+K L KS++ + G
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 163 VRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYV 222
+R E + + + I+++Y F D + +YL++E+ P G++ L + E + ++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
E A+ H+ IHRDIKP+NLL+ G L+++DFG + +L+
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR---------- 168
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
RR + GT DY+ PE++ K + + D W
Sbjct: 169 ---------------------------RRXMC----GTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 343 LGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQ 401
G + YE LVG PPF S T R+IVN LKFP LS +KDLISKLL + Q
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQ 253
Query: 402 RLGAKGADEIKVHPW 416
RL KG E HPW
Sbjct: 254 RLPLKGVME---HPW 265
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 154/307 (50%), Gaps = 50/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D ++ ++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+KLY F+D + YL+ E GG++ ++ + +E +A + + + I +HK
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 150
Query: 235 HHYIHRDIKPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ +HRD+KP+NLLL+ K ++R+ DFGL
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------------------------- 182
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
H++ +++M +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 183 ------------THFEASKKM--KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 227
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV-NQRLGAKGADE 410
G PPF + +K+ + + P+ K+S AKDLI K+L V + R+ A+ A +
Sbjct: 228 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 287
Query: 411 IKVHPWF 417
H W
Sbjct: 288 ---HEWI 291
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 60/319 (18%)
Query: 105 YMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV---- 160
Y+R + K+G F++ + G GA+GEV +C+EK A+K +KKS+ +G+
Sbjct: 26 YVRKKEGKIGESYFKVRKL-GSGAYGEVLLCKEKNGHSEKAIKVIKKSQ-FDKGRYSDDN 83
Query: 161 -------EHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTL 213
E + E +LL +D I+KL+ F+D ++ YL+ E+ GG++ ++ +
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF 143
Query: 214 TEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHL---RLSDFGLCKPLDCST 270
E +A + + + I +HKH+ +HRDIKP+N+LL+ L ++ DFGL S+
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL------SS 197
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
+D+ + + L GT YIAPEV L
Sbjct: 198 FFSKDYKLRDRL------------------------------------GTAYYIAPEV-L 220
Query: 331 KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKD 390
KK Y +CD WS G IMY +L GYPPF + +K+ + + F + +S EAK+
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 391 LISKLLC-NVNQRLGAKGA 408
LI +L + N+R A+ A
Sbjct: 281 LIKLMLTYDYNKRCTAEEA 299
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 147/315 (46%), Gaps = 51/315 (16%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M ++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
E + + + I++LY F D +YLI+EY P G++ L + E Y+ E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
A+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------------------- 160
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 161 ------------------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG 404
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR
Sbjct: 200 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 255
Query: 405 AKGADEIKVHPWFDG 419
+ E+ HPW
Sbjct: 256 LR---EVLEHPWITA 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 145/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 181
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 182 ---------------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 223
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 224 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 278
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 279 --EVLEHPWITA 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 46/282 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF++ ++GKG+F V TG A+K + K M + G V+ V+ E + ++
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIESIHK 234
I++LY F+D ++YL++E G+M L R +E+EAR ++ + + + +H
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
H +HRD+ NLLL + +++++DFGL
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGL-------------------------------- 158
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 354
Q ++ H + Y+ GTP+YI+PE+ + +G+E D WSLG + Y +L+G
Sbjct: 159 ---ATQLKMPHEKH------YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
Query: 355 PPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL 396
PPF +D +T K+V + + LSIEAKDLI +LL
Sbjct: 210 PPFDTDTVKNTLNKVVLA----DYEMPSFLSIEAKDLIHQLL 247
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 145/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 172
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 173 ---------------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 214
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 215 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 269
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 270 --EVLEHPWITA 279
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 146/313 (46%), Gaps = 51/313 (16%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M ++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
E + + + I++LY F D +YLI+EY P G++ L + E Y+ E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
A+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------------------- 160
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 161 ------------------VHAPSSRRX---XLXGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG 404
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR
Sbjct: 200 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 255
Query: 405 AKGADEIKVHPWF 417
+ E+ HPW
Sbjct: 256 LR---EVLEHPWI 265
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 50/299 (16%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D I KLY
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D + YL+ E GG++ ++ + +E +A + + + I HK+ +HRD+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 243 KPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
KP+NLLL+ K ++R+ DFGL
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 176
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 359
H++ +++ +GT YIAPEV L Y +CD WS G I+Y +L G PPF
Sbjct: 177 ----THFEASKK--XKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNG 229
Query: 360 DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV-NQRLGAKGADEIKVHPWF 417
+ +K+ + + P+ K+S AKDLI K L V + R+ A+ A + H W
Sbjct: 230 ANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALD---HEWI 285
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 146/315 (46%), Gaps = 51/315 (16%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M ++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
E + + + I++LY F D +YLI+EY P G + L + E Y+ E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
A+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------------------- 160
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 161 ------------------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG 404
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR
Sbjct: 200 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 255
Query: 405 AKGADEIKVHPWFDG 419
+ E+ HPW
Sbjct: 256 LR---EVLEHPWITA 267
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG C
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSC-------------------- 157
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 158 ----------------HAPSSRRT---TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 199 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 253
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 254 --EVLEHPWITA 263
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 146/315 (46%), Gaps = 51/315 (16%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M ++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
E + + + I++LY F D +YLI+EY P G + L + E Y+ E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
A+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------------------- 158
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 159 ------------------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG 404
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 405 AKGADEIKVHPWFDG 419
+ E+ HPW
Sbjct: 254 LR---EVLEHPWITA 265
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 144/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 160
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR + GT DY+ PE + + + + D WSLG + Y
Sbjct: 161 ---------------VHAPSSRRT---TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCY 202
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 203 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPXLR- 257
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 258 --EVLEHPWITA 267
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 151/307 (49%), Gaps = 53/307 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER--NLLAEV 173
DD++L +GKGAF VR C +KT YA K + ++ R +H + ER + +
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR---DHQKLEREARICRLL 87
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
IV+L+ S ++ F YL+ + + GG++ ++ ++ +E +A + + + ++ IH
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 234 KHHYIHRDIKPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+H +HRD+KP+NLLL K ++L+DFGL
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI-------------------------- 181
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
Q EQ Q W + GTP Y++PEVL K YG D W+ G I+Y +
Sbjct: 182 ------EVQGEQ-QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYIL 226
Query: 351 LVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD 409
LVGYPPF+ +D ++I PE ++ EAK+LI+++L N +R+ AD
Sbjct: 227 LVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRI---TAD 283
Query: 410 EIKVHPW 416
+ HPW
Sbjct: 284 QALKHPW 290
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 150/307 (48%), Gaps = 51/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A+ + ++ M+GKG+FGEV C+++ T YA+K + K+ + +R E LL ++D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLD 79
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+KL+ +D Y++ E GG++ ++++ +E +A + + I +HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 235 HHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
H+ +HRD+KP+N+LL +K +++ DFGL C
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLST---C----------------------- 173
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+Q+N +M +GT YIAPEV L+ Y +CD WS G I+Y +L
Sbjct: 174 --------------FQQNTKM--KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADE 410
G PPFY + +++ + P+ +S +AKDLI K+L + + R+ A E
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276
Query: 411 IKVHPWF 417
HPW
Sbjct: 277 ---HPWI 280
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 144/310 (46%), Gaps = 51/310 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 181
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR GT DY+ PE++ + + + D WSLG + Y
Sbjct: 182 ---------------VHAPSSRRD---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 223
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 224 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 278
Query: 408 ADEIKVHPWF 417
E+ HPW
Sbjct: 279 --EVLEHPWI 286
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 141/303 (46%), Gaps = 51/303 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF++ +GKG FG V + RE+ + + A+K L K+++ + G +R E + + +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWS-------------------------------- 159
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 160 --------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF + T R+I R FP+ ++ A+DLIS+LL N +QRL E+ H
Sbjct: 209 PFEAHTYQETYRRIS--RVEFTFPD--FVTEGARDLISRLLKHNASQRLTLA---EVLEH 261
Query: 415 PWF 417
PW
Sbjct: 262 PWI 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 51/303 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 158
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 159 --------VHAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 208 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 260
Query: 415 PWF 417
PW
Sbjct: 261 PWI 263
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 142/305 (46%), Gaps = 51/305 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 155
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 156 --------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 415 PWFDG 419
PW
Sbjct: 258 PWITA 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 146/315 (46%), Gaps = 51/315 (16%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M ++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
E + + + I++LY F D +YLI+EY P G + L + E Y+ E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
A+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------------------- 158
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 159 ------------------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG 404
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 405 AKGADEIKVHPWFDG 419
+ E+ HPW
Sbjct: 254 LR---EVLEHPWITA 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 144/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 157
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR GT DY+ PE++ + + + D WSLG + Y
Sbjct: 158 ---------------VHAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 199
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 200 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 254
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 255 --EVLEHPWITA 264
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 142/305 (46%), Gaps = 51/305 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 155
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 156 --------VHAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 205 PFEANTYQDTYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 415 PWFDG 419
PW
Sbjct: 258 PWITA 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 144/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 156
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR GT DY+ PE++ + + + D WSLG + Y
Sbjct: 157 ---------------VHAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 199 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 253
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 254 --EVLEHPWITA 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L++++FG
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS------------------------- 157
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 158 ---------------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 199
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 200 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 254
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 255 --EVLEHPWITA 264
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 141/305 (46%), Gaps = 51/305 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 155
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 156 --------VHAPSSRRT---ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 415 PWFDG 419
PW
Sbjct: 258 PWITA 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 51/303 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 159
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 160 --------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 208
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 209 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 261
Query: 415 PWF 417
PW
Sbjct: 262 PWI 264
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 145/306 (47%), Gaps = 53/306 (17%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
F + ++G GAF EV + +++ TG ++A+K +KKS R +E+ E +L ++
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIKHEN 67
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
IV L ++ YL+M+ + GG++ ++ + TE +A + + + A++ +H++
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 238 IHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
+HRD+KP+NLL ++ + ++DFGL K EQ NG
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSK-------MEQ--------NG---------- 162
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 354
+ + GTP Y+APEVL +K Y D WS+G I Y +L GY
Sbjct: 163 ------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY 204
Query: 355 PPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKV 413
PPFY + KI + P +S AKD I LL + N+R + A
Sbjct: 205 PPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS--- 261
Query: 414 HPWFDG 419
HPW DG
Sbjct: 262 HPWIDG 267
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 145/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 156
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 157 ---------------VHAPSSRRD---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 199 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 253
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 254 --EVLEHPWITA 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 142/305 (46%), Gaps = 51/305 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 155
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 156 --------VHAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 415 PWFDG 419
PW
Sbjct: 258 PWITA 262
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 141/303 (46%), Gaps = 51/303 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DF++ +GKG FG V + RE+ + + A+K L K+++ + G +R E + + +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWS-------------------------------- 159
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 160 --------VHAPSSRRD---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF + T R+I R FP+ ++ A+DLIS+LL N +QRL E+ H
Sbjct: 209 PFEAHTYQETYRRIS--RVEFTFPD--FVTEGARDLISRLLKHNASQRLTLA---EVLEH 261
Query: 415 PWF 417
PW
Sbjct: 262 PWI 264
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 144/310 (46%), Gaps = 51/310 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 160
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR GT DY+ PE++ + + + D WSLG + Y
Sbjct: 161 ---------------VHAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 203 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 257
Query: 408 ADEIKVHPWF 417
E+ HPW
Sbjct: 258 --EVLEHPWI 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 141/305 (46%), Gaps = 51/305 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 155
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 156 --------VHAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 415 PWFDG 419
PW
Sbjct: 258 PWITA 262
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 148/307 (48%), Gaps = 50/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D ++ + +G GA+GEV +C++K TG A+K +KKS + + E +L ++D
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+KLY F+D YL+ME GG++ ++ + +E +A + + + +HK
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 235 HHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
H+ +HRD+KP+NLLL+ +++ DFGL F +G + ER
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGL----------SAHFEVGGKM------KER 166
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+GT YIAPEVL KK Y +CD WS G I+Y +L
Sbjct: 167 --------------------------LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILL 199
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADE 410
GYPPF +++ + P+ ++S EAK L+ +L ++R+ A+E
Sbjct: 200 CGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRI---SAEE 256
Query: 411 IKVHPWF 417
HPW
Sbjct: 257 ALNHPWI 263
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 144/312 (46%), Gaps = 51/312 (16%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ + + I++LY F D +YLI+EY P G + L + E Y+ E A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------- 155
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
H +RR GT DY+ PE++ + + + D WSLG + Y
Sbjct: 156 ---------------VHAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR +
Sbjct: 198 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 252
Query: 408 ADEIKVHPWFDG 419
E+ HPW
Sbjct: 253 --EVLEHPWITA 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 146/315 (46%), Gaps = 51/315 (16%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M ++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
E + + + I++LY F D +YLI+EY P G + L + E Y+ E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
A+ H IHRDIKP+NLLL G L++++FG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS---------------------- 158
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 159 ------------------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG 404
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 405 AKGADEIKVHPWFDG 419
+ E+ HPW
Sbjct: 254 LR---EVLEHPWITA 265
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 142/305 (46%), Gaps = 51/305 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 154
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 155 --------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 203
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 204 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 256
Query: 415 PWFDG 419
PW
Sbjct: 257 PWITA 261
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 51/315 (16%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M ++ + +DFE+ +GKG FG V + REK + + A+K L K+++ + G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
E + + + I++LY F D +YLI+EY P G + L + E Y+ E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
A+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------------------- 158
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 159 ------------------VHAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLG 404
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N +QR
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 405 AKGADEIKVHPWFDG 419
+ E+ HPW
Sbjct: 254 LR---EVLEHPWITA 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 141/303 (46%), Gaps = 51/303 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 155
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 156 --------VHAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 415 PWF 417
PW
Sbjct: 258 PWI 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 141/303 (46%), Gaps = 51/303 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 155
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 156 --------VHAPSSRRT---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 415 PWF 417
PW
Sbjct: 258 PWI 260
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 148/307 (48%), Gaps = 50/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D ++ + +G GA+GEV +C++K TG A+K +KKS + + E +L ++D
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+KLY F+D YL+ME GG++ ++ + +E +A + + + +HK
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 235 HHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
H+ +HRD+KP+NLLL+ +++ DFGL F +G + ER
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGL----------SAHFEVGGKM------KER 183
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+GT YIAPEVL KK Y +CD WS G I+Y +L
Sbjct: 184 --------------------------LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILL 216
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADE 410
GYPPF +++ + P+ ++S EAK L+ +L ++R+ A+E
Sbjct: 217 CGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRI---SAEE 273
Query: 411 IKVHPWF 417
HPW
Sbjct: 274 ALNHPWI 280
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 51/298 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G GA+GEV +CR+K T A+K ++K+ + + E +L +D I+KLY
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVLKLLDHPNIMKLYD 103
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
F+D YL+ME GG++ ++ + E +A + + + + +HKH+ +HRD+K
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLK 163
Query: 244 PDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQ 300
P+NLLL +K +++ DFGL + ++ +
Sbjct: 164 PENLLLESKEKDALIKIVDFGLSAVFE---------------------------NQKKMK 196
Query: 301 EQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSD 360
E+L GT YIAPEVL KK Y +CD WS+G I++ +L GYPPF
Sbjct: 197 ERL---------------GTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQ 240
Query: 361 DPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWF 417
RK+ + PE +S AKDLI ++L + +R+ A+ A E HPW
Sbjct: 241 TDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE---HPWI 295
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 49/305 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D+++L IGKGAF VR C + TGH YA K + ++ R + R R S
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
N IV+L+ S ++ F YL+ + + GG++ ++ ++ +E +A + + + A+ H+
Sbjct: 64 N-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 236 HYIHRDIKPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+HRD+KP+NLLL K ++L+DFGL
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGL------------------------------ 152
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 352
Q +Q Q W + GTP Y++PEVL K+ YG D W+ G I+Y +LV
Sbjct: 153 --AIEVQGDQ-QAW--------FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLV 201
Query: 353 GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEI 411
GYPPF+ +D ++I PE ++ EAK+LI+++L N +R+ A A +
Sbjct: 202 GYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALK- 260
Query: 412 KVHPW 416
HPW
Sbjct: 261 --HPW 263
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 141/305 (46%), Gaps = 51/305 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + A+K L K+++ + G +R E + + +
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 152
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 153 --------VHAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 201
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 202 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 254
Query: 415 PWFDG 419
PW
Sbjct: 255 PWITA 259
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 151/307 (49%), Gaps = 51/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A+ + ++ M+GKG+FGEV C+++ T YA+K + K+ + +R E LL ++D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLD 79
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+KL+ +D Y++ E GG++ ++++ +E +A + + I +HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 235 HHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
H+ +HRD+KP+N+LL +K +++ DFGL ST
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGL------STC-------------------- 173
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+Q+N +M +GT YIAPEV L+ Y +CD WS G I+Y +L
Sbjct: 174 --------------FQQNTKM--KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADE 410
G PPFY + +++ + P+ +S +AKDLI K+L + + R+ A E
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276
Query: 411 IKVHPWF 417
HPW
Sbjct: 277 ---HPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 151/307 (49%), Gaps = 51/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A+ + ++ M+GKG+FGEV C+++ T YA+K + K+ + +R E LL ++D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLD 79
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+KL+ +D Y++ E GG++ ++++ +E +A + + I +HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 235 HHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
H+ +HRD+KP+N+LL +K +++ DFGL ST
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGL------STC-------------------- 173
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+Q+N +M +GT YIAPEV L+ Y +CD WS G I+Y +L
Sbjct: 174 --------------FQQNTKM--KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADE 410
G PPFY + +++ + P+ +S +AKDLI K+L + + R+ A E
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276
Query: 411 IKVHPWF 417
HPW
Sbjct: 277 ---HPWI 280
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 141/303 (46%), Gaps = 51/303 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+DFE+ +GKG FG V + REK + + A+K L K+++ + G +R E + + +
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++LY F D +YLI+EY P G + L + E Y+ E A+ H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRDIKP+NLLL G L+++DFG
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWS-------------------------------- 158
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
H +RR GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 159 --------VHAPSSRRD---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVH 414
PF ++ T ++I R FP+ ++ A+DLIS+LL N +QR + E+ H
Sbjct: 208 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 260
Query: 415 PWF 417
PW
Sbjct: 261 PWI 263
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 148/308 (48%), Gaps = 53/308 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER--NLLAEV 173
D+++L +GKGAF VR C + TG YA K + ++ R +H + ER + +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR---DHQKLEREARICRLL 60
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
IV+L+ S ++ F YL+ + + GG++ ++ ++ +E +A + + + ++ H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 234 KHHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+ +HRD+KP+NLLL K ++L+DFGL +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV------------------------ 156
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
Q Q W + GTP Y++PEVL K YG D W+ G I+Y +
Sbjct: 157 ---------QGDQQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 351 LVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD 409
LVGYPPF+ +D ++I PE ++ EAKDLI+K+L N +R+ A A
Sbjct: 200 LVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEAL 259
Query: 410 EIKVHPWF 417
+ HPW
Sbjct: 260 K---HPWI 264
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 165/363 (45%), Gaps = 71/363 (19%)
Query: 90 DQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL 149
D L+FL+ K L+ MG D F ++G+G FGEV C+ K TG +YA KKL
Sbjct: 164 DSKYFLRFLQWK-----WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKL 218
Query: 150 KKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR 209
K + +R + E+ +LA+V S IV L +F+ L L+M + GGD+ +
Sbjct: 219 NKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN 278
Query: 210 KD----TLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
D E A FY A+ V +E +H+ + I+RD+KP+N+LLD G++R+SD GL
Sbjct: 279 VDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
L + + + GTP ++A
Sbjct: 339 LKAGQTKTKGYA-----------------------------------------GTPGFMA 357
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEA--- 382
PE+LL + Y D+++LG +YEM+ PF + K+ N + E+A
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF-----RARGEKVENKELKQRVLEQAVTY 412
Query: 383 --KLSIEAKDLISKLLC-NVNQRLGAK--GADEIKVHPWFDGVDWARIYQMEAA-----F 432
K S +KD LL + +RLG + D ++ HP F + W Q+EA F
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR---QLEAGMLTPPF 469
Query: 433 IPE 435
+P+
Sbjct: 470 VPD 472
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 139/306 (45%), Gaps = 51/306 (16%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
FE +G GAF EV + EK TG ++A+K + K + +G+ + E +L ++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHEN 81
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
IV L ++ LYL+M+ + GG++ ++ K TE +A + + + A+ +H+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 238 IHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
+HRD+KP+NLL D+ + +SDFGL K
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSK------------------------------ 171
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 354
+ + + + GTP Y+APEVL +K Y D WS+G I Y +L GY
Sbjct: 172 ------------MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 219
Query: 355 PPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKV 413
PPFY ++ +I+ P +S AKD I L+ + N+R + A
Sbjct: 220 PPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAAR--- 276
Query: 414 HPWFDG 419
HPW G
Sbjct: 277 HPWIAG 282
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 53/308 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER--NLLAEV 173
D+++L +GKGAF VR C + TG YA K + ++ R +H + ER + +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR---DHQKLEREARICRLL 60
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
IV+L+ S ++ F YL+ + + GG++ ++ ++ +E +A + + + ++ H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 234 KHHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+ +HRD+KP+NLLL K ++L+DFGL
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--------------------------- 153
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
Q +Q Q W + GTP Y++PEVL K YG D W+ G I+Y +
Sbjct: 154 -----IEVQGDQ-QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 351 LVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD 409
LVGYPPF+ +D ++I PE ++ EAKDLI+K+L N +R+ A A
Sbjct: 200 LVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEAL 259
Query: 410 EIKVHPWF 417
+ HPW
Sbjct: 260 K---HPWI 264
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 147/311 (47%), Gaps = 54/311 (17%)
Query: 108 LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
L RH DDFE+ +GKG FG V + REK + + A+K L KS++ + G +R E
Sbjct: 16 LTRH-FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREI 74
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+ A + I++LY F D +YLI+EY P G++ L + T E + E
Sbjct: 75 EIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
A+ H IHRDIKP+NLLL G L+++DFG
Sbjct: 135 ALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG-------------------------- 168
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTV-GTPDYIAPEVLLKKGYGMECDWWSLGAI 346
W + L T+ GT DY+ PE++ + + + D W +G +
Sbjct: 169 ------------------WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVL 210
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGA 405
YE+LVG PPF S T R+IV + LKFP A + A+DLISKLL N ++RL
Sbjct: 211 CYELLVGNPPFESASHNETYRRIV--KVDLKFP--ASVPTGAQDLISKLLRHNPSERLPL 266
Query: 406 KGADEIKVHPW 416
++ HPW
Sbjct: 267 A---QVSAHPW 274
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 165/363 (45%), Gaps = 71/363 (19%)
Query: 90 DQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL 149
D L+FL+ K L+ MG D F ++G+G FGEV C+ K TG +YA KKL
Sbjct: 164 DSLYFLRFLQWK-----WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKL 218
Query: 150 KKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR 209
K + +R + E+ +LA+V S IV L +F+ L L+M + GGD+ +
Sbjct: 219 NKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN 278
Query: 210 KD----TLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
D E A FY A+ V +E +H+ + I+RD+KP+N+LLD G++R+SD GL
Sbjct: 279 VDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
L + + + GTP ++A
Sbjct: 339 LKAGQTKTKGYA-----------------------------------------GTPGFMA 357
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEA--- 382
PE+LL + Y D+++LG +YEM+ PF + K+ N + E+A
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF-----RARGEKVENKELKQRVLEQAVTY 412
Query: 383 --KLSIEAKDLISKLLC-NVNQRLGAK--GADEIKVHPWFDGVDWARIYQMEAA-----F 432
K S +KD LL + +RLG + D ++ HP F + W Q+EA F
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR---QLEAGMLTPPF 469
Query: 433 IPE 435
+P+
Sbjct: 470 VPD 472
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 165/363 (45%), Gaps = 71/363 (19%)
Query: 90 DQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL 149
D L+FL+ K L+ MG D F ++G+G FGEV C+ K TG +YA KKL
Sbjct: 164 DSLYFLRFLQWK-----WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKL 218
Query: 150 KKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR 209
K + +R + E+ +LA+V S IV L +F+ L L+M + GGD+ +
Sbjct: 219 NKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN 278
Query: 210 KD----TLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
D E A FY A+ V +E +H+ + I+RD+KP+N+LLD G++R+SD GL
Sbjct: 279 VDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
L + + + GTP ++A
Sbjct: 339 LKAGQTKTKGYA-----------------------------------------GTPGFMA 357
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEA--- 382
PE+LL + Y D+++LG +YEM+ PF + K+ N + E+A
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF-----RARGEKVENKELKQRVLEQAVTY 412
Query: 383 --KLSIEAKDLISKLLC-NVNQRLGAK--GADEIKVHPWFDGVDWARIYQMEAA-----F 432
K S +KD LL + +RLG + D ++ HP F + W Q+EA F
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR---QLEAGMLTPPF 469
Query: 433 IPE 435
+P+
Sbjct: 470 VPD 472
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 58/309 (18%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLK-KSEMLRRGQVEHVRA----ERNLLAEVDSNC 177
+IG+G VR C + TGH +A+K ++ +E L Q+E VR E ++L +V +
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 178 -IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
I+ L S++ F++L+ + + G++ L K L+E E R + + A+ +H ++
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+KP+N+LLD +RLSDFG C
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFG----FSC---------------------------- 248
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL------LKKGYGMECDWWSLGAIMYEM 350
L+ +K R + GTP Y+APE+L GYG E D W+ G I++ +
Sbjct: 249 -----HLEPGEKLREL-----CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 351 LVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD 409
L G PPF+ + R I+ + PE S KDLIS+LL + RL A+ A
Sbjct: 299 LAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL 358
Query: 410 EIKVHPWFD 418
+ HP+F+
Sbjct: 359 Q---HPFFE 364
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 165/363 (45%), Gaps = 71/363 (19%)
Query: 90 DQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL 149
D L+FL+ K L+ MG D F ++G+G FGEV C+ K TG +YA KKL
Sbjct: 164 DSLYFLRFLQWK-----WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKL 218
Query: 150 KKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR 209
K + +R + E+ +LA+V S IV L +F+ L L+M + GGD+ +
Sbjct: 219 NKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN 278
Query: 210 KD----TLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
D E A FY A+ V +E +H+ + I+RD+KP+N+LLD G++R+SD GL
Sbjct: 279 VDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
L + + + GTP ++A
Sbjct: 339 LKAGQTKTKGYA-----------------------------------------GTPGFMA 357
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEA--- 382
PE+LL + Y D+++LG +YEM+ PF + K+ N + E+A
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG-----EKVENKELKQRVLEQAVTY 412
Query: 383 --KLSIEAKDLISKLLC-NVNQRLGAK--GADEIKVHPWFDGVDWARIYQMEAA-----F 432
K S +KD LL + +RLG + D ++ HP F + W Q+EA F
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR---QLEAGMLTPPF 469
Query: 433 IPE 435
+P+
Sbjct: 470 VPD 472
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 76/322 (23%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLR-----------------------RGQV 160
IGKG++G V++ + YAMK L K +++R RG +
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 161 EHVRAERNLLAEVDSNCIVKLYCSFQD--DEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA 218
E V E +L ++D +VKL D ++ LY++ E + G +M + K L+ED+A
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQA 139
Query: 219 RFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTI 278
RFY + + IE +H IHRDIKP NLL+ + GH++++DFG +
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG----------------V 183
Query: 279 GNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYG 335
N GS L +TVGTP ++APE L K G
Sbjct: 184 SNEFKGSDA-------------------------LLSNTVGTPAFMAPESLSETRKIFSG 218
Query: 336 MECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKL 395
D W++G +Y + G PF + M KI + L+FP++ ++ + KDLI+++
Sbjct: 219 KALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS--QALEFPDQPDIAEDLKDLITRM 276
Query: 396 L-CNVNQRLGAKGADEIKVHPW 416
L N R+ EIK+HPW
Sbjct: 277 LDKNPESRIVVP---EIKLHPW 295
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E + +D+ +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+DD+F+Y+++E ++ L R+ +TE EAR+++ +T+ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L+ +++ DFGL ++ +++D
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC------------------------- 203
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
GTP+YIAPEVL KKG+ E D WSLG I+Y +LVG PPF
Sbjct: 204 ----------------GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 148/306 (48%), Gaps = 53/306 (17%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER--NLLAEVDS 175
++L +GKGAF VR C + G YA K + ++ R +H + ER + +
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR---DHQKLEREARICRLLKH 80
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
IV+L+ S ++ YLI + + GG++ ++ ++ +E +A + + + A+ H+
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 236 HYIHRDIKPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+HRD+KP+NLLL K ++L+DFGL
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAI---------------------------- 172
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 352
+ EQ Q W + GTP Y++PEVL K YG D W+ G I+Y +LV
Sbjct: 173 ----EVEGEQ-QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 219
Query: 353 GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEI 411
GYPPF+ +D ++I PE ++ EAKDLI+K+L N ++R+ A A+ +
Sbjct: 220 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITA--AEAL 277
Query: 412 KVHPWF 417
K HPW
Sbjct: 278 K-HPWI 282
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 57/316 (18%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRGQV-EHVRAERNLLAE 172
D +++ +G G F V+ CREK+TG YA K +KK S RRG E + E ++L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI 232
V I+ L+ +++ + LI+E + GG++ L +K++L+E+EA ++ + + + +
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 233 HKHHYIHRDIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
H H D+KP+N+ LLDK H++L DFGL ++ +G
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------DGVEFK 176
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
N GTP+++APE++ + G+E D WS+G I Y
Sbjct: 177 N---------------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE--AKLSIEAKDLISKLLCN-VNQRLGA 405
+L G PF D T I F EE ++ S AKD I KLL +RL
Sbjct: 210 ILLSGASPFLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI 267
Query: 406 KGADEIKVHPWFDGVD 421
+ A HPW VD
Sbjct: 268 QEALR---HPWITPVD 280
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 57/308 (18%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK S RRG E + E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L +K++L+E+EA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLDK H++L DFGL ++ +G N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------DGVEFKN------- 177
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 178 --------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 357 FYSDDPMSTCRKIVNWRTHLKFPEE--AKLSIEAKDLISKLLCN-VNQRLGAKGADEIKV 413
F D T I F EE ++ S AKD I KLL +RL + A
Sbjct: 218 FLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR--- 272
Query: 414 HPWFDGVD 421
HPW VD
Sbjct: 273 HPWITPVD 280
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 57/308 (18%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK S RRG E + E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L +K++L+E+EA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLDK H++L DFGL ++ +G N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------DGVEFKN------- 177
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 178 --------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 357 FYSDDPMSTCRKIVNWRTHLKFPEE--AKLSIEAKDLISKLLCN-VNQRLGAKGADEIKV 413
F D T I + F EE + S AKD I KLL +RL + A
Sbjct: 218 FLGDTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR--- 272
Query: 414 HPWFDGVD 421
HPW VD
Sbjct: 273 HPWITPVD 280
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E + +D+ +V +
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+DD+F+Y+++E ++ L R+ +TE EAR+++ +T+ ++ +H + IHRD+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 152
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L+ +++ DFGL ++ +++D
Sbjct: 153 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC------------------------- 187
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
GTP+YIAPEVL KKG+ E D WSLG I+Y +LVG PPF
Sbjct: 188 ----------------GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 149/316 (47%), Gaps = 57/316 (18%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAE 172
D +++ +G G F V+ CREK+TG YA K +KK S RRG E + E ++L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI 232
V + ++ L+ +++ + LI+E + GG++ L +K++L+E+EA ++ + + + +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 233 HKHHYIHRDIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
H H D+KP+N+ LLDK H++L DFGL ++ +G
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------DGVEFK 176
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
N GTP+++APE++ + G+E D WS+G I Y
Sbjct: 177 N---------------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE--AKLSIEAKDLISKLLCN-VNQRLGA 405
+L G PF D T I + F EE + S AKD I KLL +RL
Sbjct: 210 ILLSGASPFLGDTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI 267
Query: 406 KGADEIKVHPWFDGVD 421
+ A HPW VD
Sbjct: 268 QEALR---HPWITPVD 280
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 57/308 (18%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK S RRG E + E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L +K++L+E+EA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLDK H++L DFGL ++ +G N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------DGVEFKN------- 177
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 178 --------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 357 FYSDDPMSTCRKIVNWRTHLKFPEE--AKLSIEAKDLISKLLCN-VNQRLGAKGADEIKV 413
F D T I F EE ++ S AKD I KLL +RL + A
Sbjct: 218 FLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR--- 272
Query: 414 HPWFDGVD 421
HPW VD
Sbjct: 273 HPWITPVD 280
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 57/308 (18%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK S RRG E + E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L +K++L+E+EA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLDK H++L DFGL ++ +G N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------DGVEFKN------- 177
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 178 --------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 357 FYSDDPMSTCRKIVNWRTHLKFPEE--AKLSIEAKDLISKLLCN-VNQRLGAKGADEIKV 413
F D T I + F EE + S AKD I KLL +RL + A
Sbjct: 218 FLGDTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR--- 272
Query: 414 HPWFDGVD 421
HPW VD
Sbjct: 273 HPWITPVD 280
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 43/254 (16%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
+EL IG G F +V++ TG + A+K + K+ + + ++ E L +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQH 69
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
I +LY + +++++EY PGG++ ++ +D L+E+E R + V A+ +H Y
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGY 129
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
HRD+KP+NLL D+Y L+L DFGLC A PK
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLC-----------------------------AKPKG 160
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPP 356
+ LQ + G+ Y APE++ K Y G E D WS+G ++Y ++ G+ P
Sbjct: 161 NKDYHLQ-----------TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
Query: 357 FYSDDPMSTCRKIV 370
F D+ M+ +KI+
Sbjct: 210 FDDDNVMALYKKIM 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 50/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D++++ +GKGAF VR C KTTG +A K + ++ R + + E + ++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ 86
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+L+ S Q++ F YL+ + + GG++ ++ ++ +E +A + + + +I H
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 235 HHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ +HR++KP+NLLL K ++L+DFGL ++ S
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------------------- 184
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ W + GTP Y++PEVL K Y D W+ G I+Y +L
Sbjct: 185 ------------EAW--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLI-SKLLCNVNQRLGAKGADE 410
VGYPPF+ +D +I PE ++ EAK LI S L N +R+ A A +
Sbjct: 225 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284
Query: 411 IKVHPWF 417
+ PW
Sbjct: 285 V---PWI 288
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E + +D+ +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+DD+F+Y+++E ++ L R+ +TE EAR+++ +T+ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L+ +++ DFGL +T E D ER K+T
Sbjct: 169 KLGNLFLNDDMDVKIGDFGL------ATKIEFD-------------GER----KKT---- 201
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
GTP+YIAPEVL KKG+ E D WSLG I+Y +LVG PPF
Sbjct: 202 --------------LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E + +D+ +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+DD+F+Y+++E ++ L R+ +TE EAR+++ +T+ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L+ +++ DFGL ++ +G +
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIE--------------FDGERKK-------------- 200
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
GTP+YIAPEVL KKG+ E D WSLG I+Y +LVG PPF
Sbjct: 201 -------------XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D++F+++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L++ +++ DFGL +T E D ER K+T
Sbjct: 148 KLGNLFLNEDLEVKIGDFGL------ATKVEYD-------------GER----KKT---- 180
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF
Sbjct: 181 --------------LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 59/306 (19%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEML--RRG-Q 159
TE + Q M D +E+ +G G F VR CR+K TG YA K +KK + RRG
Sbjct: 15 TENLYFQ--SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVS 72
Query: 160 VEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEAR 219
E + E N+L E+ I+ L+ F++ + LI+E + GG++ L K++LTEDEA
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 220 FYVAETVLAIESIHKHHYIHRDIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQD 275
++ + + + +H H D+KP+N+ LLDK ++L DFG+ ++
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA------- 185
Query: 276 FTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYG 335
GN + GTP+++APE++ + G
Sbjct: 186 ---GNEFK--------------------------------NIFGTPEFVAPEIVNYEPLG 210
Query: 336 MECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDL 391
+E D WS+G I Y +L G PF + T I VN+ F EE + S AKD
Sbjct: 211 LEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDF 266
Query: 392 ISKLLC 397
I +LL
Sbjct: 267 IRRLLV 272
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 121/235 (51%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D++F+++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L++ +++ DFGL +T E D ER
Sbjct: 166 KLGNLFLNEDLEVKIGDFGL------ATKVEYD-------------GER----------- 195
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
+++L GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF
Sbjct: 196 -------KKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D++F+++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L++ +++ DFGL +T E D ER K+T
Sbjct: 144 KLGNLFLNEDLEVKIGDFGL------ATKVEYD-------------GER----KKT---- 176
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF
Sbjct: 177 --------------LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 121/235 (51%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D++F+++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L++ +++ DFGL +T E D ER
Sbjct: 168 KLGNLFLNEDLEVKIGDFGL------ATKVEYD-------------GER----------- 197
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
+++L GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF
Sbjct: 198 -------KKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D++F+++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L++ +++ DFGL +T E D ER K+T
Sbjct: 144 KLGNLFLNEDLEVKIGDFGL------ATKVEYD-------------GER----KKT---- 176
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF
Sbjct: 177 --------------LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 138/296 (46%), Gaps = 57/296 (19%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEML--RRG-QVEHVRAERNL 169
M D +E+ +G G F VR CR+K TG YA K +KK + RRG E + E N+
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
L E+ I+ L+ F++ + LI+E + GG++ L K++LTEDEA ++ + + +
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 230 ESIHKHHYIHRDIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
+H H D+KP+N+ LLDK ++L DFG+ ++ GN
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA----------GNEFK-- 169
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
+ GTP+++APE++ + G+E D WS+G
Sbjct: 170 ------------------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 199
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC 397
I Y +L G PF + T I VN+ F EE + S AKD I +LL
Sbjct: 200 ITYILLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDFIRRLLV 251
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 149/308 (48%), Gaps = 53/308 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER--NLLAEV 173
++++L +GKGAF VR C + G YA + ++ R +H + ER + +
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR---DHQKLEREARICRLL 67
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
IV+L+ S ++ YLI + + GG++ ++ ++ +E +A + + + A+ H
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 234 KHHYIHRDIKPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+ +HR++KP+NLLL K ++L+DFGL
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI-------------------------- 161
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
+ EQ Q W + GTP Y++PEVL K YG D W+ G I+Y +
Sbjct: 162 ------EVEGEQ-QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL 206
Query: 351 LVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGAD 409
LVGYPPF+ +D ++I PE ++ EAKDLI+K+L N ++R+ A A+
Sbjct: 207 LVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITA--AE 264
Query: 410 EIKVHPWF 417
+K HPW
Sbjct: 265 ALK-HPWI 271
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 121/235 (51%), Gaps = 41/235 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+D++F+++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K NL L++ +++ DFGL +T E D ER
Sbjct: 142 KLGNLFLNEDLEVKIGDFGL------ATKVEYD-------------GER----------- 171
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
+++L GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF
Sbjct: 172 -------KKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 144/310 (46%), Gaps = 58/310 (18%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D + + IG G++ E + C K T YA+K + KS +R E + LL
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEIEI---LLRYGQ 79
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+ L + D + +YL+ E + GG+++ ++R+ +E EA F + +E +H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 235 HHYIHRDIKPDNLL-LDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+HRD+KP N+L +D+ G+ LR+ DFG K L NG
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE-------------NG------ 180
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
L + T +++APEVL ++GY CD WSLG ++Y M
Sbjct: 181 ----------------------LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 351 LVGYPPFY---SDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAK 406
L GY PF SD P +I + + L +S AKDL+SK+L + +QRL AK
Sbjct: 219 LAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK 278
Query: 407 GADEIKVHPW 416
++ HPW
Sbjct: 279 ---QVLQHPW 285
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 144/310 (46%), Gaps = 58/310 (18%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D + + IG G++ E + C K T YA+K + KS +R E + LL
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEIEI---LLRYGQ 79
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+ L + D + +YL+ E + GG+++ ++R+ +E EA F + +E +H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 235 HHYIHRDIKPDNLL-LDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+HRD+KP N+L +D+ G+ LR+ DFG K L NG
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE-------------NG------ 180
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
L + T +++APEVL ++GY CD WSLG ++Y M
Sbjct: 181 ----------------------LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 351 LVGYPPFY---SDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAK 406
L GY PF SD P +I + + L +S AKDL+SK+L + +QRL AK
Sbjct: 219 LAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK 278
Query: 407 GADEIKVHPW 416
++ HPW
Sbjct: 279 ---QVLQHPW 285
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 57/293 (19%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEML--RRG-QVEHVRAERNLLAE 172
D +E+ +G G F VR CR+K TG YA K +KK + RRG E + E N+L E
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI 232
+ I+ L+ F++ + LI+E + GG++ L K++LTEDEA ++ + + + +
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 233 HKHHYIHRDIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
H H D+KP+N+ LLDK ++L DFG+ ++ GN
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA----------GNEFK----- 176
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
+ GTP+++APE++ + G+E D WS+G I Y
Sbjct: 177 ---------------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 349 EMLVGYPPFYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC 397
+L G PF + T I VN+ F EE + S AKD I +LL
Sbjct: 210 ILLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDFIRRLLV 258
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 50/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D++++ +GKGAF VR C KTTG +A K + ++ R + + E + ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ 63
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+L+ S Q++ F YL+ + + GG++ ++ ++ +E +A + + + +I H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 235 HHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ +HR++KP+NLLL K ++L+DFGL ++ S
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------------------- 161
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ W + GTP Y++PEVL K Y D W+ G I+Y +L
Sbjct: 162 ------------EAW--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLI-SKLLCNVNQRLGAKGADE 410
VGYPPF+ +D +I PE ++ EAK LI S L N +R+ A A +
Sbjct: 202 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261
Query: 411 IKVHPWF 417
+ PW
Sbjct: 262 V---PWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 50/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D++++ +GKGAF VR C KTTG +A K + ++ R + + E + ++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ 62
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+L+ S Q++ F YL+ + + GG++ ++ ++ +E +A + + + +I H
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 235 HHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ +HR++KP+NLLL K ++L+DFGL ++ S
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------------------- 160
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ W + GTP Y++PEVL K Y D W+ G I+Y +L
Sbjct: 161 ------------EAW--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 200
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLI-SKLLCNVNQRLGAKGADE 410
VGYPPF+ +D +I PE ++ EAK LI S L N +R+ A A +
Sbjct: 201 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 260
Query: 411 IKVHPWF 417
+ PW
Sbjct: 261 V---PWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 50/307 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D++++ +GKGAF VR C KTTG +A K + ++ R + + E + ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ 63
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+L+ S Q++ F YL+ + + GG++ ++ ++ +E +A + + + +I H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 235 HHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ +HR++KP+NLLL K ++L+DFGL ++ S
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------------------- 161
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ W + GTP Y++PEVL K Y D W+ G I+Y +L
Sbjct: 162 ------------EAW--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLI-SKLLCNVNQRLGAKGADE 410
VGYPPF+ +D +I PE ++ EAK LI S L N +R+ A A +
Sbjct: 202 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261
Query: 411 IKVHPWF 417
+ PW
Sbjct: 262 V---PWI 265
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 55/310 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D FE+ + +G+GA V C++K T YA+K LKK+ + VR E +L +
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS 106
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
I+KL F+ + L++E + GG++ ++ K +E +A V + + A+ +H+
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 235 HHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ +HRD+KP+NLL L+++DFGL K ++
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE------------------------ 202
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
++L + GTP Y APE+L YG E D WS+G I Y +L
Sbjct: 203 ------------------HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL 244
Query: 352 VGYPPFYSD-DPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGAD 409
G+ PFY + R+I+N + P ++S+ AKDL+ KL+ + +RL A
Sbjct: 245 CGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304
Query: 410 EIKVHPWFDG 419
+ HPW G
Sbjct: 305 Q---HPWVTG 311
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 51/308 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D ++ ++G GAF EV + +K T + A+K + K + G+ + E +L ++
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKH 75
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
IV L ++ LYLIM+ + GG++ ++ K TE +A + + + A++ +H
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 236 HYIHRDIKPDNLL---LDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+HRD+KP+NLL LD+ + +SDFGL K E P
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK------------------------MEDP 171
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 352
+ T GTP Y+APEVL +K Y D WS+G I Y +L
Sbjct: 172 GSVLST------------------ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 353 GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEI 411
GYPPFY ++ +I+ P +S AKD I L+ + +R + A +
Sbjct: 214 GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ- 272
Query: 412 KVHPWFDG 419
HPW G
Sbjct: 273 --HPWIAG 278
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 51/308 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D ++ ++G GAF EV + +K T + A+K + K + G+ + E +L ++
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLHKIKH 75
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
IV L ++ LYLIM+ + GG++ ++ K TE +A + + + A++ +H
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 236 HYIHRDIKPDNLL---LDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+HRD+KP+NLL LD+ + +SDFGL K E P
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK------------------------MEDP 171
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 352
+ T GTP Y+APEVL +K Y D WS+G I Y +L
Sbjct: 172 GSVLST------------------ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 353 GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEI 411
GYPPFY ++ +I+ P +S AKD I L+ + +R + A +
Sbjct: 214 GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ- 272
Query: 412 KVHPWFDG 419
HPW G
Sbjct: 273 --HPWIAG 278
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 51/308 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D ++ ++G GAF EV + +K T + A+K + K + G+ + E +L ++
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKH 75
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
IV L ++ LYLIM+ + GG++ ++ K TE +A + + + A++ +H
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 236 HYIHRDIKPDNLL---LDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+HRD+KP+NLL LD+ + +SDFGL K E P
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK------------------------MEDP 171
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 352
+ T GTP Y+APEVL +K Y D WS+G I Y +L
Sbjct: 172 GSVLST------------------ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 353 GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEI 411
GYPPFY ++ +I+ P +S AKD I L+ + +R + A +
Sbjct: 214 GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ- 272
Query: 412 KVHPWFDG 419
HPW G
Sbjct: 273 --HPWIAG 278
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 57/307 (18%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
+ L IG+G++GEV++ +K T A KK+ K + V+ + E ++ +D
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPN 84
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
I++LY +F+D+ +YL+ME GG++ ++ K E +A + + + A+ HK +
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 238 IHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
HRD+KP+N L L+L DFGL +P
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF------------------------KPGK 180
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 354
RT+ VGTP Y++P+V L+ YG ECD WS G +MY +L GY
Sbjct: 181 MMRTK------------------VGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGY 221
Query: 355 PPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI--EAKDLISKLLC-NVNQRLGAKGADEI 411
PPF + KI FPE+ L++ +A+ LI +LL + QR+ + A E
Sbjct: 222 PPFSAPTDXEVMLKIRE--GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE- 278
Query: 412 KVHPWFD 418
H WF+
Sbjct: 279 --HEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 57/307 (18%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
+ L IG+G++GEV++ +K T A KK+ K + V+ + E ++ +D
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPN 67
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
I++LY +F+D+ +YL+ME GG++ ++ K E +A + + + A+ HK +
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 238 IHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
HRD+KP+N L L+L DFGL +P
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF------------------------KPGK 163
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 354
RT+ VGTP Y++P+V L+ YG ECD WS G +MY +L GY
Sbjct: 164 MMRTK------------------VGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGY 204
Query: 355 PPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI--EAKDLISKLLC-NVNQRLGAKGADEI 411
PPF + KI FPE+ L++ +A+ LI +LL + QR+ + A E
Sbjct: 205 PPFSAPTDXEVMLKIRE--GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE- 261
Query: 412 KVHPWFD 418
H WF+
Sbjct: 262 --HEWFE 266
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 51/308 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D ++ ++G GAF EV + +K T + A+K + K + G+ + E +L ++
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKH 75
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
IV L ++ LYLIM+ + GG++ ++ K TE +A + + + A++ +H
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 236 HYIHRDIKPDNLL---LDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+HRD+KP+NLL LD+ + +SDFGL K E P
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK------------------------MEDP 171
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 352
+ T GTP Y+APEVL +K Y D WS+G I Y +L
Sbjct: 172 GSVLST------------------ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 353 GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEI 411
GYPPFY ++ +I+ P +S AKD I L+ + +R + A +
Sbjct: 214 GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ- 272
Query: 412 KVHPWFDG 419
HPW G
Sbjct: 273 --HPWIAG 278
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 63/318 (19%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL----------KKSEMLRRGQVEHVRA 165
+++E ++G+G VR C K T YA+K + ++ + LR ++ V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
R + + I++L +++ + F +L+ + + G++ L K TL+E E R +
Sbjct: 77 LRKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
+ I ++HK + +HRD+KP+N+LLD +++L+DFG LD
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD------------------ 175
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL------KKGYGMECD 339
P R S GTP Y+APE++ GYG E D
Sbjct: 176 ------PGEKLR------------------SVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 340 WWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WS G IMY +L G PPF+ M R I++ PE S KDL+S+ L V
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL--V 269
Query: 400 NQRLGAKGADEIKVHPWF 417
Q A+E HP+F
Sbjct: 270 VQPQKRYTAEEALAHPFF 287
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 61/305 (20%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPW 416
HPW
Sbjct: 272 --HPW 274
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 139/309 (44%), Gaps = 55/309 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D +EL+ IG G FG R+ R+K + + A+K +++ E + + R+L
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL----R 73
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+ L ++MEY GG++ + +EDEARF+ + + + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 235 HHYIHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
HRD+K +N LLD L++ DFG K S L Q
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQ------------------ 172
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 351
PK STVGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 173 --PK-------------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKF--PEEAKLSIEAKDLISKL-LCNVNQRLGAKGA 408
VG PF + RK ++ ++++ P+ +S E + LIS++ + + +R+
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 269
Query: 409 DEIKVHPWF 417
EI+ H WF
Sbjct: 270 -EIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 139/309 (44%), Gaps = 55/309 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D +EL+ IG G FG R+ R+K + + A+K +++ E + + R+L
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----R 72
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+ L ++MEY GG++ + +EDEARF+ + + + H
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 235 HHYIHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
HRD+K +N LLD L++ DFG K S L Q
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQ------------------ 171
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 351
PK STVGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 172 --PK-------------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 210
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKF--PEEAKLSIEAKDLISKL-LCNVNQRLGAKGA 408
VG PF + RK ++ ++++ P+ +S E + LIS++ + + +R+
Sbjct: 211 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 268
Query: 409 DEIKVHPWF 417
EI+ H WF
Sbjct: 269 -EIRNHEWF 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 138/309 (44%), Gaps = 55/309 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D +EL+ IG G FG R+ R+K + A+K +++ E + + R+L
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSL----R 73
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+ L ++MEY GG++ + +EDEARF+ + + + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 235 HHYIHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
HRD+K +N LLD L+++DFG K S L Q
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQ------------------ 172
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 351
PK S VGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 173 --PK-------------------SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKF--PEEAKLSIEAKDLISKL-LCNVNQRLGAKGA 408
VG PF + RK ++ ++++ P+ +S E + LIS++ + + +R+
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 269
Query: 409 DEIKVHPWF 417
EI+ H WF
Sbjct: 270 -EIRNHEWF 277
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 61/305 (20%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 174
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 175 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 216 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 270
Query: 412 KVHPW 416
HPW
Sbjct: 271 --HPW 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 174
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 175 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 216 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 270
Query: 412 KVHPWF 417
HPW
Sbjct: 271 --HPWI 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP ++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 56/299 (18%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDSNCIVKL 181
+G+G+FG+V++ T A+K + + ++L++ + H+R ER + L + I+KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISR-QLLKKSDM-HMRVEREISYLKLLRHPHIIKL 74
Query: 182 YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRD 241
Y + +++EY GG++ ++ K +TEDE R + + + AIE H+H +HRD
Sbjct: 75 YDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 242 IKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQE 301
+KP+NLLLD +++++DFGL + T GN L S
Sbjct: 134 LKPENLLLDDNLNVKIADFGLSNIM----------TDGNFLKTSC--------------- 168
Query: 302 QLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSD 360
G+P+Y APEV+ K Y G E D WS G ++Y MLVG PF D
Sbjct: 169 -----------------GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-DD 210
Query: 361 DPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADEIKVHPWFD 418
+ + K VN ++ P+ LS A+ LI +++ + QR+ + EI+ PWF+
Sbjct: 211 EFIPNLFKKVNSCVYV-MPD--FLSPGAQSLIRRMIVADPMQRITIQ---EIRRDPWFN 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 48/282 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ LL IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYL+MEY GG++ L+ + E EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT GN L+
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
PF + +++ + + F +S + ++L+ K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLI 249
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 140/318 (44%), Gaps = 63/318 (19%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL----------KKSEMLRRGQVEHVRA 165
+++E ++G+G VR C K T YA+K + ++ + LR ++ V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
R + + I++L +++ + F +L+ + + G++ L K TL+E E R +
Sbjct: 77 LRKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
+ I ++HK + +HRD+KP+N+LLD +++L+DFG LD
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD------------------ 175
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL------KKGYGMECD 339
P R GTP Y+APE++ GYG E D
Sbjct: 176 ------PGEKLR------------------EVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 340 WWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WS G IMY +L G PPF+ M R I++ PE S KDL+S+ L V
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL--V 269
Query: 400 NQRLGAKGADEIKVHPWF 417
Q A+E HP+F
Sbjct: 270 VQPQKRYTAEEALAHPFF 287
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 140/318 (44%), Gaps = 63/318 (19%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL----------KKSEMLRRGQVEHVRA 165
+++E ++G+G VR C K T YA+K + ++ + LR ++ V
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
R + + I++L +++ + F +L+ + + G++ L K TL+E E R +
Sbjct: 64 LRKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
+ I ++HK + +HRD+KP+N+LLD +++L+DFG LD
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD------------------ 162
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL------KKGYGMECD 339
P R GTP Y+APE++ GYG E D
Sbjct: 163 ------PGEKLR------------------EVCGTPSYLAPEIIECSMNDNHPGYGKEVD 198
Query: 340 WWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WS G IMY +L G PPF+ M R I++ PE S KDL+S+ L V
Sbjct: 199 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL--V 256
Query: 400 NQRLGAKGADEIKVHPWF 417
Q A+E HP+F
Sbjct: 257 VQPQKRYTAEEALAHPFF 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI+E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 48/282 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ LL IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYL+MEY GG++ L+ + E EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT GN L+
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
PF + +++ + + F +S + ++L+ K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLI 249
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 133/282 (47%), Gaps = 48/282 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ LL IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYL+MEY GG++ L+ + E EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT GN L+
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
+ G P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
PF + +++ + + F +S + ++L+ K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLI 249
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 61/306 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG-QVEHVRAERNLLAEVDSNCIVK 180
+G G F V+ CREK+TG YA K +KK ++ RRG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ +++ + LI E + GG++ L K++LTE+EA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 241 DIKPDNL-LLDK---YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
D+KP+N+ LLD+ +++ DFGL +D GN
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------FGNEFK------------- 175
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 176 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 357 FYSDDPMSTCRKI--VNWRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQRLGAKGADEI 411
F D T + VN+ +F +E + S AKD I +LL + +R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 412 KVHPWF 417
HPW
Sbjct: 272 --HPWI 275
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 48/282 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ LL IGKG F +V++ R TG A++ + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYL+MEY GG++ L+ + E EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT GN L+
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
PF + +++ + + F +S + ++L+ K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLI 249
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 138/309 (44%), Gaps = 55/309 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D +EL+ IG G FG R+ R+K + + A+K +++ E + + R+L
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----R 73
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+ L ++MEY GG++ + +EDEARF+ + + + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 235 HHYIHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
HRD+K +N LLD L++ FG K S L Q
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQ------------------ 172
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 351
PK STVGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 173 --PK-------------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKF--PEEAKLSIEAKDLISKL-LCNVNQRLGAKGA 408
VG PF + RK ++ ++++ P+ +S E + LIS++ + + +R+
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 269
Query: 409 DEIKVHPWF 417
EI+ H WF
Sbjct: 270 -EIRNHEWF 277
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 147/322 (45%), Gaps = 60/322 (18%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D +E+ IG G++ + C K T +A+K + KS +R E + LL
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS---KRDPTEEIEI---LLRYGQH 75
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I+ L + D +++Y++ E + GG+++ ++R+ +E EA + +E +H
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 236 HYIHRDIKPDNLL-LDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+HRD+KP N+L +D+ G+ +R+ DFG K L NG
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-------------NG------- 175
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
L + T +++APEVL ++GY CD WSLG ++Y ML
Sbjct: 176 ---------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214
Query: 352 VGYPPFYS---DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
GY PF + D P +I + + L +S AKDL+SK+L + +QRL A
Sbjct: 215 TGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAA- 273
Query: 408 ADEIKVHPWFDGVDWARIYQME 429
+ HPW V W ++ Q +
Sbjct: 274 --LVLRHPWI--VHWDQLPQYQ 291
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 54/292 (18%)
Query: 113 MGADD------FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE 166
MG+D+ + LL IGKG F +V++ R TG A+K + K++ L ++ + E
Sbjct: 3 MGSDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFRE 61
Query: 167 RNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETV 226
++ ++ IVKL+ + ++ LYLIMEY GG++ L+ + E EAR + V
Sbjct: 62 VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 121
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
A++ H+ +HRD+K +NLLLD +++++DFG +FT+G L+
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS----------NEFTVGGKLD--- 168
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 345
+ G+P Y APE+ K Y G E D WSLG
Sbjct: 169 -----------------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
I+Y ++ G PF + +++ + + F +S + ++L+ + L
Sbjct: 200 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLV 247
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 57/324 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-----HVRAERNLL 170
D++ + +G GA GEV++ E+ T A+K + K + E +V E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+++ CI+K+ +F D E Y+++E + GG++ ++ L E + Y + +LA++
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H++ IHRD+KP+N+LL ++++DFG K L ++L
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-------------- 174
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLG 344
+ GTP Y+APEVL+ GY D WSLG
Sbjct: 175 ----------------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 345 AIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE-AKLSIEAKDLISKLLCNVNQRL 403
I++ L GYPPF + + + + PE A++S +A DL+ KLL V
Sbjct: 207 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL--VVDPK 264
Query: 404 GAKGADEIKVHPWFDGVDWARIYQ 427
+E HPW D R +Q
Sbjct: 265 ARFTTEEALRHPWLQDEDMKRKFQ 288
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 48/282 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ LL IGKG F +V++ R TG A++ + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYL+MEY GG++ L+ + E EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT GN L+
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
PF + +++ + + F +S + ++L+ K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLI 249
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 57/324 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-----HVRAERNLL 170
D++ + +G GA GEV++ E+ T A+K + K + E +V E +L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+++ CI+K+ +F D E Y+++E + GG++ ++ L E + Y + +LA++
Sbjct: 69 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H++ IHRD+KP+N+LL ++++DFG K L ++L
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-------------- 173
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLG 344
+ GTP Y+APEVL+ GY D WSLG
Sbjct: 174 ----------------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 205
Query: 345 AIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE-AKLSIEAKDLISKLLCNVNQRL 403
I++ L GYPPF + + + + PE A++S +A DL+ KLL V
Sbjct: 206 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL--VVDPK 263
Query: 404 GAKGADEIKVHPWFDGVDWARIYQ 427
+E HPW D R +Q
Sbjct: 264 ARFTTEEALRHPWLQDEDMKRKFQ 287
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 48/282 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ LL IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 66
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYL+MEY GG++ L+ + E EAR + V A++ H+
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT GN L+
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 163
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 164 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
PF + +++ + + F +S + ++L+ K L
Sbjct: 205 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLI 242
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 57/324 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-----HVRAERNLL 170
D++ + +G GA GEV++ E+ T A+K + K + E +V E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+++ CI+K+ +F D E Y+++E + GG++ ++ L E + Y + +LA++
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H++ IHRD+KP+N+LL ++++DFG K L ++L
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-------------- 174
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLG 344
+ GTP Y+APEVL+ GY D WSLG
Sbjct: 175 ----------------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 345 AIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE-AKLSIEAKDLISKLLCNVNQRL 403
I++ L GYPPF + + + + PE A++S +A DL+ KLL V
Sbjct: 207 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL--VVDPK 264
Query: 404 GAKGADEIKVHPWFDGVDWARIYQ 427
+E HPW D R +Q
Sbjct: 265 ARFTTEEALRHPWLQDEDMKRKFQ 288
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 57/324 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-----HVRAERNLL 170
D++ + +G GA GEV++ E+ T A+K + K + E +V E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+++ CI+K+ +F D E Y+++E + GG++ ++ L E + Y + +LA++
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H++ IHRD+KP+N+LL ++++DFG K L ++L
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-------------- 174
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLG 344
+ GTP Y+APEVL+ GY D WSLG
Sbjct: 175 ----------------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 345 AIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE-AKLSIEAKDLISKLLCNVNQRL 403
I++ L GYPPF + + + + PE A++S +A DL+ KLL V
Sbjct: 207 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL--VVDPK 264
Query: 404 GAKGADEIKVHPWFDGVDWARIYQ 427
+E HPW D R +Q
Sbjct: 265 ARFTTEEALRHPWLQDEDMKRKFQ 288
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 57/324 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-----HVRAERNLL 170
D++ + +G GA GEV++ E+ T A+K + K + E +V E +L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+++ CI+K+ +F D E Y+++E + GG++ ++ L E + Y + +LA++
Sbjct: 76 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H++ IHRD+KP+N+LL ++++DFG K L ++L
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-------------- 180
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLG 344
+ GTP Y+APEVL+ GY D WSLG
Sbjct: 181 ----------------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 212
Query: 345 AIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE-AKLSIEAKDLISKLLCNVNQRL 403
I++ L GYPPF + + + + PE A++S +A DL+ KLL V
Sbjct: 213 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL--VVDPK 270
Query: 404 GAKGADEIKVHPWFDGVDWARIYQ 427
+E HPW D R +Q
Sbjct: 271 ARFTTEEALRHPWLQDEDMKRKFQ 294
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 46/296 (15%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
++G G FG+V C E TG A K +K M + E V+ E +++ ++D +++LY
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK---EEVKNEISVMNQLDHANLIQLY 152
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKD-TLTEDEARFYVAETVLAIESIHKHHYIHRD 241
+F+ + L+MEY+ GG++ ++ + LTE + ++ + I +H+ + +H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 242 IKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQE 301
+KP+N+ LC D ++ DF + A + +E
Sbjct: 213 LKPENI--------------LCVNRDAKQIKIIDFGL---------------ARRYKPRE 243
Query: 302 QLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 361
+L+ GTP+++APEV+ D WS+G I Y +L G PF D+
Sbjct: 244 KLK-----------VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292
Query: 362 PMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWF 417
T I+ R L+ E +S EAK+ ISKLL + ++ A E HPW
Sbjct: 293 DAETLNNILACRWDLEDEEFQDISEEAKEFISKLL--IKEKSWRISASEALKHPWL 346
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 119/242 (49%), Gaps = 44/242 (18%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ L IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHP 74
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYL+MEY GG++ L+ + E EAR + V A++ H+ +
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT+GN L+
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFS----------NEFTVGNKLD------------- 171
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 172 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 356 PF 357
PF
Sbjct: 213 PF 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 48/282 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ LL IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHP 74
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYLIMEY GG++ L+ + E EAR + V A++ H+
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT+G L+
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGF----------SNEFTVGGKLD------------- 171
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
+ G P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 172 -------------------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
PF + +++ + + F +S + ++L+ + L
Sbjct: 213 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLV 250
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D +EL+ IG G FG R+ R+K + + A+K +++ E + + R+L
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----R 73
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+ L ++MEY GG++ + +EDEARF+ + + + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 235 HHYIHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
HRD+K +N LLD L++ FG K S L Q
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQ------------------ 172
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 351
PK TVGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 173 --PK-------------------DTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKF--PEEAKLSIEAKDLISKL-LCNVNQRLGAKGA 408
VG PF + RK ++ ++++ P+ +S E + LIS++ + + +R+
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 269
Query: 409 DEIKVHPWF 417
EI+ H WF
Sbjct: 270 -EIRNHEWF 277
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 132/308 (42%), Gaps = 53/308 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+D ++ + IG G FG R+ R+K T + A+K +++ + + R+L
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL----R 74
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
IV+ L +IMEY GG++ + +EDEARF+ + + + H
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 235 HHYIHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
HRD+K +N LLD L++ DFG K S L Q
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQ------------------ 173
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 351
PK STVGTP YIAPEVLL++ Y G D WS G +Y ML
Sbjct: 174 --PK-------------------STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML 212
Query: 352 VGYPPFYSDDPMSTCRKIVNWRTHLKF--PEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
VG PF + RK + +K+ P++ ++S E LIS++ V
Sbjct: 213 VGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIF--VADPATRISIP 270
Query: 410 EIKVHPWF 417
EIK H WF
Sbjct: 271 EIKTHSWF 278
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 57/324 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-----HVRAERNLL 170
D++ + +G GA GEV++ E+ T A++ + K + E +V E +L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+++ CI+K+ +F D E Y+++E + GG++ ++ L E + Y + +LA++
Sbjct: 195 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H++ IHRD+KP+N+LL ++++DFG K L ++L
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-------------- 299
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLG 344
+ GTP Y+APEVL+ GY D WSLG
Sbjct: 300 ----------------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 331
Query: 345 AIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE-AKLSIEAKDLISKLLCNVNQRL 403
I++ L GYPPF + + + + PE A++S +A DL+ KLL V
Sbjct: 332 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL--VVDPK 389
Query: 404 GAKGADEIKVHPWFDGVDWARIYQ 427
+E HPW D R +Q
Sbjct: 390 ARFTTEEALRHPWLQDEDMKRKFQ 413
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
F++L +G+G++G V K TG + A+K++ L + + E +++ + DS
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-----QEIIKEISIMQQCDSPH 85
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAETVLAIESIHKHH 236
+VK Y S+ + L+++MEY G + ++ +R TLTEDE + T+ +E +H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
IHRDIK N+LL+ GH +L+DFG+ G + ++ N
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVA---------------GQLTDXMAKRN------- 183
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+GTP ++APEV+ + GY D WSLG EM G PP
Sbjct: 184 -------------------XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
Query: 357 FYSDDPM 363
+ PM
Sbjct: 225 YADIHPM 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 141/318 (44%), Gaps = 57/318 (17%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
++G+GA+ +V+ G YA+K ++K R +V R L + I++L
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV--FREVETLYQCQGNKNILELI 77
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F+DD YL+ E L GG ++ + ++ E EA V + A++ +H HRD+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
KP+N+L + P S ++ DF +G+ G NN P T +
Sbjct: 138 KPENILCES-------------PEKVSPVKICDFDLGS---GMKLNNS--CTPITTPE-- 177
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVL-----LKKGYGMECDWWSLGAIMYEMLVGYPPF 357
+ G+ +Y+APEV+ Y CD WSLG ++Y ML GYPPF
Sbjct: 178 -----------LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
Query: 358 YSD-------DPMSTCRKIVN------WRTHLKFPEE--AKLSIEAKDLISKLLC-NVNQ 401
D CR N +FP++ A +S EAKDLISKLL + Q
Sbjct: 227 VGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQ 286
Query: 402 RLGAKGADEIKVHPWFDG 419
RL A ++ HPW G
Sbjct: 287 RLSAA---QVLQHPWVQG 301
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 57/324 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-----HVRAERNLL 170
D++ + +G GA GEV++ E+ T A++ + K + E +V E +L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIE 230
+++ CI+K+ +F D E Y+++E + GG++ ++ L E + Y + +LA++
Sbjct: 209 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H++ IHRD+KP+N+LL ++++DFG K L ++L
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-------------- 313
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLG 344
+ GTP Y+APEVL+ GY D WSLG
Sbjct: 314 ----------------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 345
Query: 345 AIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEE-AKLSIEAKDLISKLLCNVNQRL 403
I++ L GYPPF + + + + PE A++S +A DL+ KLL V
Sbjct: 346 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL--VVDPK 403
Query: 404 GAKGADEIKVHPWFDGVDWARIYQ 427
+E HPW D R +Q
Sbjct: 404 ARFTTEEALRHPWLQDEDMKRKFQ 427
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 52/303 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
+++++ +G+G+FG+V++ TTG A+K + K + + + E + L +
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
I+KLY + + + +++EY G ++ ++++D ++E EAR + + + A+E H+H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+KP+NLLLD++ +++++DFGL + T GN L S
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIM----------TDGNFLKTSC---------- 173
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
G+P+Y APEV+ K Y G E D WS G I+Y ML
Sbjct: 174 ----------------------GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 211
Query: 356 PFYSDDPMSTCRKIVNWRTHL-KFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVH 414
PF + + I N L KF LS A LI ++L + L EI
Sbjct: 212 PFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLNRISIHEIMQD 264
Query: 415 PWF 417
WF
Sbjct: 265 DWF 267
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 49/285 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+GA G V + TG A++++ + ++ E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
DN+LL G ++L+DFG C + P KR++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQI------------------------TPEQSKRSEM--- 176
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ +++P+
Sbjct: 177 --------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 364 STCRKI-VNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAK 406
I N L+ PE KLS +D +++ L +V +R AK
Sbjct: 223 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKRGSAK 265
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 49/285 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+GA G V + TG A++++ + ++ E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
DN+LL G ++L+DFG C + P KR+
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQI------------------------TPEQSKRS----- 174
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
+ VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ +++P+
Sbjct: 175 ------------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 364 STCRKI-VNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAK 406
I N L+ PE KLS +D +++ L +V +R AK
Sbjct: 223 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKRGSAK 265
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 52/303 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
+++++ +G+G+FG+V++ TTG A+K + K + + + E + L +
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
I+KLY + + + +++EY G ++ ++++D ++E EAR + + + A+E H+H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+KP+NLLLD++ +++++DFGL + T GN L S
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIM----------TDGNFLKTSC---------- 172
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
G+P+Y APEV+ K Y G E D WS G I+Y ML
Sbjct: 173 ----------------------GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 210
Query: 356 PFYSDDPMSTCRKIVNWRTHL-KFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVH 414
PF + + I N L KF LS A LI ++L + L EI
Sbjct: 211 PFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLNRISIHEIMQD 263
Query: 415 PWF 417
WF
Sbjct: 264 DWF 266
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 52/303 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
+++++ +G+G+FG+V++ TTG A+K + K + + + E + L +
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
I+KLY + + + +++EY G ++ ++++D ++E EAR + + + A+E H+H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+KP+NLLLD++ +++++DFGL + T GN L S
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIM----------TDGNFLKTSC---------- 163
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
G+P+Y APEV+ K Y G E D WS G I+Y ML
Sbjct: 164 ----------------------GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 201
Query: 356 PFYSDDPMSTCRKIVNWRTHL-KFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVH 414
PF + + I N L KF LS A LI ++L + L EI
Sbjct: 202 PFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLNRISIHEIMQD 254
Query: 415 PWF 417
WF
Sbjct: 255 DWF 257
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 52/308 (16%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D +++L +G GAFG V C EK TG V+ K + L + V++ E +++ ++
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN---EISIMNQLHH 107
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD-TLTEDEARFYVAETVLAIESIHK 234
++ L+ +F+D + LI+E+L GG++ + +D ++E E Y+ + ++ +H+
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
H +H DIKP+N+ +C+ S+++ DF + LN
Sbjct: 168 HSIVHLDIKPENI--------------MCETKKASSVKIIDFGLATKLNPDE-------- 205
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 354
+ T T ++ APE++ ++ G D W++G + Y +L G
Sbjct: 206 ------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 247
Query: 355 PPFYSDDPMSTCRKIVNWRTHLKFPEEA--KLSIEAKDLISKLLCN-VNQRLGAKGADEI 411
PF +D + T + + R +F E+A +S EAKD I LL +RL A E
Sbjct: 248 SPFAGEDDLETLQNVK--RCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE- 304
Query: 412 KVHPWFDG 419
HPW G
Sbjct: 305 --HPWLKG 310
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 52/303 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
+++++ +G+G+FG+V++ TTG A+K + K + + + E + L +
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
I+KLY + + + +++EY G ++ ++++D ++E EAR + + + A+E H+H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+KP+NLLLD++ +++++DFGL + T GN L S
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIM----------TDGNFLKTSC---------- 167
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
G+P+Y APEV+ K Y G E D WS G I+Y ML
Sbjct: 168 ----------------------GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 205
Query: 356 PFYSDDPMSTCRKIVNWRTHL-KFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVH 414
PF + + I N L KF LS A LI ++L + L EI
Sbjct: 206 PFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLNRISIHEIMQD 258
Query: 415 PWF 417
WF
Sbjct: 259 DWF 261
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 49/285 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+GA G V + TG A++++ + ++ E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
DN+LL G ++L+DFG C + P KR+
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQIT------------------------PEQSKRSXM--- 176
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ +++P+
Sbjct: 177 --------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 364 STCRKI-VNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAK 406
I N L+ PE KLS +D +++ L +V +R AK
Sbjct: 223 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRGSAK 265
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 49/285 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+GA G V + TG A++++ + ++ E + E ++ E + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHRDIK
Sbjct: 86 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 144
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
DN+LL G ++L+DFG C + P KR+
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQIT------------------------PEQSKRSXM--- 177
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ +++P+
Sbjct: 178 --------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 223
Query: 364 STCRKI-VNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAK 406
I N L+ PE KLS +D +++ L +V +R AK
Sbjct: 224 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRGSAK 266
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 48/282 (17%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ LL IGKG F +V++ R TG A+K + K++ L ++ + E + ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIXKVLNHP 73
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
IVKL+ + ++ LYL+ EY GG++ L+ E EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+K +NLLLD +++++DFG +FT GN L+
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 355
+ G P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLC 397
PF + +++ + + F S + ++L+ K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YXSTDCENLLKKFLI 249
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKL-KKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+G+G+F R C K + +A+K + K+ E + ++ ++ L E N IVKL+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALK-----LCEGHPN-IVKLH 72
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
F D +L+ME L GG++ + +K +E EA + + + V A+ +H +HRD+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 243 KPDNLLLDKYG---HLRLSDFGLC--KPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
KP+NLL +++ DFG KP D L+ FT+
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTL------------------- 173
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
Y APE+L + GY CD WSLG I+Y ML G PF
Sbjct: 174 ------------------------HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
Query: 358 YSDDPMSTCRKIVNWRTHLK-----FPEEA--KLSIEAKDLISKLL-CNVNQRLGAKG 407
S D TC V +K F EA +S EAKDLI LL + N+RL G
Sbjct: 210 QSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSG 267
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 144/322 (44%), Gaps = 60/322 (18%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D +E+ IG G++ + C K T +A+K + KS +R E + LL
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKS---KRDPTEEIEI---LLRYGQH 75
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I+ L + D +++Y++ E GG+++ ++R+ +E EA + +E +H
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 236 HYIHRDIKPDNLL-LDKYGH---LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+HRD+KP N+L +D+ G+ +R+ DFG K L NG
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-------------NG------- 175
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
L + T +++APEVL ++GY CD WSLG ++Y L
Sbjct: 176 ---------------------LLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXL 214
Query: 352 VGYPPFYS---DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKG 407
GY PF + D P +I + + L +S AKDL+SK L + +QRL A
Sbjct: 215 TGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAA- 273
Query: 408 ADEIKVHPWFDGVDWARIYQME 429
+ HPW V W ++ Q +
Sbjct: 274 --LVLRHPWI--VHWDQLPQYQ 291
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 49/285 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+GA G V + TG A++++ + ++ E + E ++ E + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHR+IK
Sbjct: 86 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 144
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
DN+LL G ++L+DFG C + P KR+
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQIT------------------------PEQSKRS----- 175
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
+ VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ +++P+
Sbjct: 176 ------------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 223
Query: 364 STCRKI-VNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGAK 406
I N L+ PE KLS +D +++ L +V +R AK
Sbjct: 224 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRGSAK 266
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 45/246 (18%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+G+ G V + EK TG A+KK+ + RR E + E ++ + + +V +Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEVVIMRDYHHDNVVDMYS 109
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++ME+L GG +T ++ + E++ + A+ +H IHRDIK
Sbjct: 110 SYLVGDELWVVMEFLEGGA-LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
D++LL G ++LSDFG C +Q ++ PKR
Sbjct: 169 SDSILLTSDGRIKLSDFGFC----------------------AQVSKE--VPKRK----- 199
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
VGTP ++APEV+ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 200 ------------XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL 247
Query: 364 STCRKI 369
R+I
Sbjct: 248 QAMRRI 253
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 141/316 (44%), Gaps = 62/316 (19%)
Query: 115 ADDFELL-TMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV 173
DD++L ++G G G+V C + TG A+K L S R+ H +A
Sbjct: 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS----GGP 82
Query: 174 DSNCIVKLYCSFQDDE-FLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETVLAIE 230
CI+ +Y + + L +IME + GG++ + + + TE EA + + AI+
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 231 SIHKHHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H H+ HRD+KP+NLL +K L+L+DFG
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA------------------------ 178
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
K T Q LQ + TP Y+APEVL + Y CD WSLG IM
Sbjct: 179 --------KETTQNALQ-----------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
Query: 348 YEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQR 402
Y +L G+PPFYS+ + R+I + PE +++S +AK LI LL + +R
Sbjct: 220 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 279
Query: 403 LGAKGADEIKVHPWFD 418
L + HPW +
Sbjct: 280 LTIT---QFMNHPWIN 292
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 141/316 (44%), Gaps = 62/316 (19%)
Query: 115 ADDFELL-TMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV 173
DD++L ++G G G+V C + TG A+K L S R+ H +A
Sbjct: 8 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS----GGP 63
Query: 174 DSNCIVKLYCSFQDDE-FLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETVLAIE 230
CI+ +Y + + L +IME + GG++ + + + TE EA + + AI+
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 231 SIHKHHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+H H+ HRD+KP+NLL +K L+L+DFG
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA------------------------ 159
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
K T Q LQ + TP Y+APEVL + Y CD WSLG IM
Sbjct: 160 --------KETTQNALQ-----------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
Query: 348 YEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQR 402
Y +L G+PPFYS+ + R+I + PE +++S +AK LI LL + +R
Sbjct: 201 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 260
Query: 403 LGAKGADEIKVHPWFD 418
L + HPW +
Sbjct: 261 LTIT---QFMNHPWIN 273
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 53/339 (15%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+H D +++ +G GAFG V E+ TG+ +A K + E VR E
Sbjct: 45 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQT 101
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLA 228
++ + +V L+ +F+DD + +I E++ GG++ + + ++EDEA Y+ +
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 161
Query: 229 IESIHKHHYIHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
+ +H+++Y+H D+KP+N++ + L+L DFGL LD
Sbjct: 162 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD------------------- 202
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
PK++ + T GT ++ APEV K G D WS+G +
Sbjct: 203 --------PKQSVK---------------VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISK-LLCNVNQRLGA 405
Y +L G PF ++ T R + + ++ + +S + KD I K LL + N R+
Sbjct: 240 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 299
Query: 406 KGADEIKVHPWFD-GVDWARIYQMEAAFIPEVNDELDTQ 443
A E HPW G R Q+ ++ ++ D + T+
Sbjct: 300 HQALE---HPWLTPGNAPGRDSQIPSSRYTKIRDSIKTK 335
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 43/249 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G G FG+V+V + + TGH A+K L + ++ V +R E L I+KLY
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
++++MEY+ GG++ + + L E E+R + + ++ H+H +HRD+K
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK 143
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
P+N+LLD + + +++DFGL +N+ +
Sbjct: 144 PENVLLDAHMNAKIADFGL-----------------SNMMSDGE---------------- 170
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSDDP 362
+ G+P+Y APEV+ + Y G E D WS G I+Y +L G PF D
Sbjct: 171 ---------FLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
Query: 363 MSTCRKIVN 371
+ +KI +
Sbjct: 222 PTLFKKICD 230
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 53/339 (15%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+H D +++ +G GAFG V E+ TG+ +A K + E VR E
Sbjct: 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQT 207
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLA 228
++ + +V L+ +F+DD + +I E++ GG++ + + ++EDEA Y+ +
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 229 IESIHKHHYIHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
+ +H+++Y+H D+KP+N++ + L+L DFGL LD
Sbjct: 268 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD------------------- 308
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
PK++ + T GT ++ APEV K G D WS+G +
Sbjct: 309 --------PKQSVK---------------VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISK-LLCNVNQRLGA 405
Y +L G PF ++ T R + + ++ + +S + KD I K LL + N R+
Sbjct: 346 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 405
Query: 406 KGADEIKVHPWFD-GVDWARIYQMEAAFIPEVNDELDTQ 443
A E HPW G R Q+ ++ ++ D + T+
Sbjct: 406 HQALE---HPWLTPGNAPGRDSQIPSSRYTKIRDSIKTK 441
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 48/294 (16%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+G+ G V + REK +G A+K + + RR E + E ++ + +V++Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ E L+++ME+L GG +T ++ + L E++ + A+ +H IHRDIK
Sbjct: 110 SYLVGEELWVLMEFLQGG-ALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
D++LL G ++LSDFG C + PKR
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKDV------------------------PKRK----- 199
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
VGTP ++APEV+ + Y E D WSLG ++ EM+ G PP++SD P+
Sbjct: 200 ------------XLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV 247
Query: 364 STCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWF 417
+++ + K K+S +D + ++L Q A E+ HP+
Sbjct: 248 QAMKRLRD-SPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT--AQELLDHPFL 298
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 52/296 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 215
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++ME+L GG +T ++ + E++ + A+ +H IHRDIK
Sbjct: 216 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
D++LL G ++LSDFG C Q+
Sbjct: 275 SDSILLTHDGRVKLSDFGFCA-------------------------------------QV 297
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
R+ L VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 298 SKEVPRRKXL----VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 353
Query: 364 STCRKIV-NWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
+ I N LK K+S K + +LL + QR A A+ +K HP+
Sbjct: 354 KAMKMIRDNLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQR--ATAAELLK-HPFL 404
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 53/254 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A+D+E+L IG G++G + R K+ G + K+L M + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 175 SNCIVKLYCSFQD--DEFLYLIMEYLPGGDMMTLLMR----KDTLTEDEARFYVAETVLA 228
IV+ Y D + LY++MEY GGD+ +++ + + L E+ + + LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 229 IESIHK-----HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
++ H+ H +HRD+KP N+ LD +++L DFGL + L+ ++DF
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----HDEDF------- 172
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
A VGTP Y++PE + + Y + D WSL
Sbjct: 173 ------------------------------AKEFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 344 GAIMYEMLVGYPPF 357
G ++YE+ PPF
Sbjct: 203 GCLLYELCALMPPF 216
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 49/295 (16%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G G FG+V++ + TGH A+K L + ++ V ++ E L I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
+++MEY+ GG++ + + + E EAR + + A++ H+H +HRD+K
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
P+N+LLD + + +++DFGL + + + +F RT
Sbjct: 139 PENVLLDAHMNAKIADFGL-----SNMMSDGEFL-------------------RT----- 169
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSDDP 362
+ G+P+Y APEV+ + Y G E D WS G I+Y +L G PF +
Sbjct: 170 -------------SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
Query: 363 MSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWF 417
+ +KI ++ PE S+ A L+ L + +R K +I+ H WF
Sbjct: 217 PTLFKKIRGGVFYI--PEYLNRSV-ATLLMHMLQVDPLKRATIK---DIREHEWF 265
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 128/282 (45%), Gaps = 53/282 (18%)
Query: 122 TMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKL 181
++GKG +G V R+ + A+K++ + + R Q H E L + IV+
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLH--EEIALHKHLKHKNIVQY 84
Query: 182 YCSFQDDEFLYLIMEYLPGGDMMTLLMRK-DTLTEDEAR--FYVAETVLAIESIHKHHYI 238
SF ++ F+ + ME +PGG + LL K L ++E FY + + ++ +H + +
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 239 HRDIKPDNLLLDKY-GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
HRDIK DN+L++ Y G L++SDFG K L + FT
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-------------------- 184
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYEMLVGYP 355
GT Y+APE++ K +GYG D WSLG + EM G P
Sbjct: 185 ---------------------GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
Query: 356 PFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL 396
PFY +P + K+ ++ H + PE +S EAK I K
Sbjct: 224 PFYELGEPQAAMFKVGMFKVHPEIPES--MSAEAKAFILKCF 263
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 53/254 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A+D+E+L IG G++G + R K+ G + K+L M + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 175 SNCIVKLYCSFQD--DEFLYLIMEYLPGGDMMTLLMR----KDTLTEDEARFYVAETVLA 228
IV+ Y D + LY++MEY GGD+ +++ + + L E+ + + LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 229 IESIHK-----HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
++ H+ H +HRD+KP N+ LD +++L DFGL + L+ T + F
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF------- 176
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
VGTP Y++PE + + Y + D WSL
Sbjct: 177 ----------------------------------VGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 344 GAIMYEMLVGYPPF 357
G ++YE+ PPF
Sbjct: 203 GCLLYELCALMPPF 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 49/295 (16%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G G FG+V++ + TGH A+K L + ++ V ++ E L I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
+++MEY+ GG++ + + + E EAR + + A++ H+H +HRD+K
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
P+N+LLD + + +++DFGL + + + +F
Sbjct: 139 PENVLLDAHMNAKIADFGL-----SNMMSDGEFL-------------------------- 167
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSDDP 362
+ G+P+Y APEV+ + Y G E D WS G I+Y +L G PF +
Sbjct: 168 -----------RDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
Query: 363 MSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWF 417
+ +KI ++ PE S+ A L+ L + +R K +I+ H WF
Sbjct: 217 PTLFKKIRGGVFYI--PEYLNRSV-ATLLMHMLQVDPLKRATIK---DIREHEWF 265
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 53/254 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A+D+E+L IG G++G + R K+ G + K+L M + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 175 SNCIVKLYCSFQD--DEFLYLIMEYLPGGDMMTLLMR----KDTLTEDEARFYVAETVLA 228
IV+ Y D + LY++MEY GGD+ +++ + + L E+ + + LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 229 IESIHK-----HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
++ H+ H +HRD+KP N+ LD +++L DFGL + L+ T
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT------------- 170
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
A + VGTP Y++PE + + Y + D WSL
Sbjct: 171 ----------------------------SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 344 GAIMYEMLVGYPPF 357
G ++YE+ PPF
Sbjct: 203 GCLLYELCALMPPF 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 52/296 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 138
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++ME+L GG +T ++ + E++ + A+ +H IHRDIK
Sbjct: 139 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
D++LL G ++LSDFG C Q+
Sbjct: 198 SDSILLTHDGRVKLSDFGFCA-------------------------------------QV 220
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
R+ L VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 221 SKEVPRRKXL----VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 276
Query: 364 STCRKIV-NWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
+ I N LK K+S K + +LL + QR A A+ +K HP+
Sbjct: 277 KAMKMIRDNLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQR--ATAAELLK-HPFL 327
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 128/282 (45%), Gaps = 53/282 (18%)
Query: 122 TMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKL 181
++GKG +G V R+ + A+K++ + + R Q H E L + IV+
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLH--EEIALHKHLKHKNIVQY 70
Query: 182 YCSFQDDEFLYLIMEYLPGGDMMTLLMRK-DTLTEDEAR--FYVAETVLAIESIHKHHYI 238
SF ++ F+ + ME +PGG + LL K L ++E FY + + ++ +H + +
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 239 HRDIKPDNLLLDKY-GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
HRDIK DN+L++ Y G L++SDFG K L + FT
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-------------------- 170
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYEMLVGYP 355
GT Y+APE++ K +GYG D WSLG + EM G P
Sbjct: 171 ---------------------GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
Query: 356 PFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL 396
PFY +P + K+ ++ H + PE +S EAK I K
Sbjct: 210 PFYELGEPQAAMFKVGMFKVHPEIPE--SMSAEAKAFILKCF 249
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 52/296 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 95
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++ME+L GG +T ++ + E++ + A+ +H IHRDIK
Sbjct: 96 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
D++LL G ++LSDFG C Q+
Sbjct: 155 SDSILLTHDGRVKLSDFGFCA-------------------------------------QV 177
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
R+ L VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 178 SKEVPRRKXL----VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 233
Query: 364 STCRKIV-NWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
+ I N LK K+S K + +LL + QR A A+ +K HP+
Sbjct: 234 KAMKMIRDNLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQR--ATAAELLK-HPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 52/296 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 93
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++ME+L GG +T ++ + E++ + A+ +H IHRDIK
Sbjct: 94 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
D++LL G ++LSDFG C Q+
Sbjct: 153 SDSILLTHDGRVKLSDFGFCA-------------------------------------QV 175
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
R+ L VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 176 SKEVPRRKXL----VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 231
Query: 364 STCRKIV-NWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
+ I N LK K+S K + +LL + QR A A+ +K HP+
Sbjct: 232 KAMKMIRDNLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQR--ATAAELLK-HPFL 282
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 52/296 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 84
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++ME+L GG +T ++ + E++ + A+ +H IHRDIK
Sbjct: 85 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
D++LL G ++LSDFG C + + E P
Sbjct: 144 SDSILLTHDGRVKLSDFGFC---------------------AQVSKEVP----------- 171
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
R+ L VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 172 -----RRKXL----VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 222
Query: 364 STCRKIV-NWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
+ I N LK K+S K + +LL + QR A A+ +K HP+
Sbjct: 223 KAMKMIRDNLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQR--ATAAELLK-HPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 52/296 (17%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 88
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
S+ + L+++ME+L GG +T ++ + E++ + A+ +H IHRDIK
Sbjct: 89 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 244 PDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
D++LL G ++LSDFG C + + E P
Sbjct: 148 SDSILLTHDGRVKLSDFGFC---------------------AQVSKEVP----------- 175
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPM 363
R+ L VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 176 -----RRKXL----VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 226
Query: 364 STCRKIV-NWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
+ I N LK K+S K + +LL + QR A A+ +K HP+
Sbjct: 227 KAMKMIRDNLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQR--ATAAELLK-HPFL 277
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 52/277 (18%)
Query: 100 KKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK-KSEMLRRG 158
+K EY ++R + +E++ +G GAFG+V + K TG + A K ++ KSE
Sbjct: 3 RKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----E 58
Query: 159 QVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD-TLTEDE 217
++E E +LA D IVKL ++ D L++++E+ PGG + +++ D LTE +
Sbjct: 59 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 118
Query: 218 ARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFT 277
+ + + A+ +H IHRD+K N+L+ G +RL+DFG+ + TLQ++D
Sbjct: 119 IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRD-- 175
Query: 278 IGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-----KK 332
S +GTP ++APEV++
Sbjct: 176 --------------------------------------SFIGTPYWMAPEVVMCETMKDT 197
Query: 333 GYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKI 369
Y + D WSLG + EM PP + +PM KI
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRG--QVEHVRAERNLLAEV 173
D +EL +IGKGAF VR C + TG +A+K + ++ E ++ E ++ +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDM-MTLLMRKD---TLTEDEARFYVAETVLAI 229
IV+L ++ D LY++ E++ G D+ ++ R D +E A Y+ + + A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 230 ESIHKHHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
H ++ IHRD+KP+N+LL + ++L DFG+ L S L
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--------------- 188
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+A VGTP ++APEV+ ++ YG D W G I
Sbjct: 189 --------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISK-LLCNVNQRLGA 405
++ +L G PFY I+ + + + + +S AKDL+ + L+ + +R+
Sbjct: 223 LFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV 281
Query: 406 KGADEIKVHPWF 417
A HPW
Sbjct: 282 YEALN---HPWL 290
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 113/254 (44%), Gaps = 47/254 (18%)
Query: 113 MGADDFELLTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ AD EL T IGKG+FGEV + T V A+K + E + + E +
Sbjct: 16 LKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITV 73
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
L++ DS + K Y S+ D L++IMEYL GG + LL L E + + E + +
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGL 132
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRDIK N+LL ++G ++L+DFG+ L + ++ F
Sbjct: 133 DYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF------------- 179
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
VGTP ++APEV+ + Y + D WSLG E
Sbjct: 180 ----------------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211
Query: 350 MLVGYPPFYSDDPM 363
+ G PP PM
Sbjct: 212 LARGEPPHSELHPM 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 60/295 (20%)
Query: 104 EYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHV 163
+Y+RLQ+ IG+G+FG+ + + G Y +K++ S M + + E
Sbjct: 25 KYVRLQK-------------IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREES 70
Query: 164 RAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTL-TEDEARFY 221
R E +LA + IV+ SF+++ LY++M+Y GGD+ + +K L ED+ +
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 222 VAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNN 281
+ LA++ +H +HRDIK N+ L K G ++L DFG+ + L+ ST++
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVE--------- 180
Query: 282 LNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 341
LA + +GTP Y++PE+ K Y + D W
Sbjct: 181 -------------------------------LARACIGTPYYLSPEICENKPYNNKSDIW 209
Query: 342 SLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL 396
+LG ++YE+ F + + KI++ P S + + L+S+L
Sbjct: 210 ALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP---PVSLHYSYDLRSLVSQLF 261
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 115/254 (45%), Gaps = 47/254 (18%)
Query: 113 MGADDFELLTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
M D EL T IGKG+FGEV + T V A+K + E ++E ++ E +
Sbjct: 1 MSLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITV 58
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
L++ DS + K Y S+ D L++IMEYL GG + LL L E + + E + +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGL 117
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRDIK N+LL ++G ++L+DFG+ L + ++ F
Sbjct: 118 DYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF------------- 164
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
VGTP ++APEV+ + Y + D WSLG E
Sbjct: 165 ----------------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 350 MLVGYPPFYSDDPM 363
+ G PP PM
Sbjct: 197 LARGEPPHSELHPM 210
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 115/254 (45%), Gaps = 47/254 (18%)
Query: 113 MGADDFELLTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
M D EL T IGKG+FGEV + T V A+K + E ++E ++ E +
Sbjct: 1 MSLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITV 58
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
L++ DS + K Y S+ D L++IMEYL GG + LL L E + + E + +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGL 117
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRDIK N+LL ++G ++L+DFG+ L + ++ F
Sbjct: 118 DYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF------------- 164
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
VGTP ++APEV+ + Y + D WSLG E
Sbjct: 165 ----------------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 350 MLVGYPPFYSDDPM 363
+ G PP PM
Sbjct: 197 LARGEPPHSELHPM 210
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 144/328 (43%), Gaps = 75/328 (22%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA----ERNLLAEVDS--N 176
++G+GA V+ C T YA+K ++K Q H+R+ E +L + N
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK-------QPGHIRSRVFREVEMLYQCQGHRN 72
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
+ + ++D F YL+ E + GG +++ + ++ E EA V + A++ +H
Sbjct: 73 VLELIEFFEEEDRF-YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131
Query: 237 YIHRDIKPDNLLLD---KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRD+KP+N+L + + +++ DFGL G LNG
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGL--------------GSGIKLNGD-------C 170
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-----YGMECDWWSLGAIMY 348
+P T + + G+ +Y+APEV+ Y CD WSLG I+Y
Sbjct: 171 SPISTPE-------------LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217
Query: 349 EMLVGYPPFY----SD---DPMSTCRKIVNW------RTHLKFPEE--AKLSIEAKDLIS 393
+L GYPPF SD D C N +FP++ A +S AKDLIS
Sbjct: 218 ILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLIS 277
Query: 394 KLLC-NVNQRLGAKGADEIKVHPWFDGV 420
KLL + QRL A ++ HPW G
Sbjct: 278 KLLVRDAKQRLSAA---QVLQHPWVQGC 302
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 113/252 (44%), Gaps = 44/252 (17%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPY 86
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
+ K Y S+ D L++IMEYL GG + LL L E + + E + ++ +H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
IHRDIK N+LL ++G ++L+DFG+ L + ++ F
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--------------------- 184
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 185 --------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH 224
Query: 358 YSDDPMSTCRKI 369
PM I
Sbjct: 225 SELHPMKVLFLI 236
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 52/259 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK-KSEMLRRGQVEHVRAERNLLAEVDSN 176
+E++ +G GAFG+V + K TG + A K ++ KSE ++E E +LA D
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHP 68
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD-TLTEDEARFYVAETVLAIESIHKH 235
IVKL ++ D L++++E+ PGG + +++ D LTE + + + + A+ +H
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
IHRD+K N+L+ G +RL+DFG+ + TLQ++D
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRD-------------------- 167
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-----KKGYGMECDWWSLGAIMYEM 350
S +GTP ++APEV++ Y + D WSLG + EM
Sbjct: 168 --------------------SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
Query: 351 LVGYPPFYSDDPMSTCRKI 369
PP + +PM KI
Sbjct: 208 AQIEPPHHELNPMRVLLKI 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 73/327 (22%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA----ERNLLAEVDS--N 176
++G+GA V+ C T YA+K ++K Q H+R+ E +L + N
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK-------QPGHIRSRVFREVEMLYQCQGHRN 72
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
+ + ++D F YL+ E + GG +++ + ++ E EA V + A++ +H
Sbjct: 73 VLELIEFFEEEDRF-YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNN--LNGSSQNNERPAA 294
HRD+KP+N+L + P S ++ DF +G+ LNG +
Sbjct: 132 IAHRDLKPENILCEH-------------PNQVSPVKICDFDLGSGIKLNGD-------CS 171
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-----YGMECDWWSLGAIMYE 349
P T + + G+ +Y+APEV+ Y CD WSLG I+Y
Sbjct: 172 PISTPE-------------LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI 218
Query: 350 MLVGYPPFY----SD---DPMSTCRKIVNW------RTHLKFPEE--AKLSIEAKDLISK 394
+L GYPPF SD D C N +FP++ A +S AKDLISK
Sbjct: 219 LLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISK 278
Query: 395 LLC-NVNQRLGAKGADEIKVHPWFDGV 420
LL + QRL A ++ HPW G
Sbjct: 279 LLVRDAKQRLSAA---QVLQHPWVQGC 302
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 111
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 221
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 222 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 250 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 309
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 310 PTQRM---TITEFMNHPWI 325
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 67 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 117
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 227
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 228 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 256 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 315
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 316 PTQRM---TITEFMNHPWI 331
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 111/246 (45%), Gaps = 44/246 (17%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS+
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSSY 82
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
+ K Y S+ L++IMEYL GG + LL R E + + E + ++ +H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
IHRDIK N+LL + G ++L+DFG+ L + ++ F
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF--------------------- 180
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 181 --------------------VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN 220
Query: 358 YSDDPM 363
PM
Sbjct: 221 SDMHPM 226
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 67/307 (21%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV--EHVRAERNLLAEVDSNCIVKL 181
+G GAFG+V + E+++G +K + K R QV E + AE +L +D I+K+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKD----RSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 182 YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL----AIESIHKHHY 237
+ F+D +Y++ME GG+++ ++ + + YVAE + A+ H H
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 238 IHRDIKPDNLLL-DKYGH--LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
+H+D+KP+N+L D H +++ DFGL + L S +++ A
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAE-----------------LFKSDEHSTNAA- 187
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 354
GT Y+APEV K+ +CD WS G +MY +L G
Sbjct: 188 ------------------------GTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGC 222
Query: 355 PPFYSDDPMSTCRKIVNWRTHLKFPEEA----KLSIEAKDLISKLLCNVNQRLGAKGADE 410
PF T + V + K P A L+ +A DL+ ++L +R A +
Sbjct: 223 LPF-----TGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPER--RPSAAQ 275
Query: 411 IKVHPWF 417
+ H WF
Sbjct: 276 VLHHEWF 282
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 159/358 (44%), Gaps = 72/358 (20%)
Query: 116 DDFELLTM--IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE---RNLL 170
++F +LT +G+G F VR C K+TG YA K LKK RRGQ RAE +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKR---RRGQ--DCRAEILHEIAV 81
Query: 171 AEVDSNC--IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
E+ +C ++ L+ +++ + LI+EY GG++ +L + + + ++E++ + + +
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL 141
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
+ +H+++ +H D+KP N+LL G +++ DFG+ +
Sbjct: 142 EGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR------------------- 182
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
++ H + R ++ GTP+Y+APE+L D W++
Sbjct: 183 ------------------KIGHACELREIM-----GTPEYLAPEILNYDPITTATDMWNI 219
Query: 344 GAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIE--AKDLISKLLC-NVN 400
G I Y +L PF +D T I + ++ + EE S+ A D I LL N
Sbjct: 220 GIIAYMLLTHTSPFVGEDNQETYLNIS--QVNVDYSEETFSSVSQLATDFIQSLLVKNPE 277
Query: 401 QRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVNDELDTQNFEKFEESDNQTKTS 458
+R A+ H W D+ ++ E E + TQ+ D +K+S
Sbjct: 278 KR---PTAEICLSHSWLQQWDFENLFHPE-----ETSSSSQTQDHSVRSSEDKTSKSS 327
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 23 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 73
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 74 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 183
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 184 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 212 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 271
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 272 PTQRM---TITEFMNHPWI 287
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 31 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 81
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 82 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 191
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 192 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 220 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 279
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 280 PTQRM---TITEFMNHPWI 295
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 67
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 177
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 178 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 206 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 265
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 266 PTQRM---TITEFMNHPWI 281
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 21 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 71
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 72 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 181
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 182 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 210 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 269
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 270 PTQRM---TITEFMNHPWI 285
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 22 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 72
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 73 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 182
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 183 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 211 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 270
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 271 PTQRM---TITEFMNHPWI 286
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 65
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 175
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 176 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 204 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 263
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 264 PTQRM---TITEFMNHPWI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 16 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 66
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 67 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 176
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 177 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 205 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 264
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 265 PTQRM---TITEFMNHPWI 280
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 67
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 177
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 178 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 206 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 265
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 266 PTQRM---TITEFMNHPWI 281
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
+F + IG+G F EV G A+KK++ +++ E +LL +++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM----RKDTLTEDEARFYVAETVLAIESI 232
++K Y SF +D L +++E GD+ ++ +K + E Y + A+E +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H +HRDIKP N+ + G ++L D GL +
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGR---------------------------- 184
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 352
+ ++ A+S VGTP Y++PE + + GY + D WSLG ++YEM
Sbjct: 185 -------------FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
Query: 353 GYPPFYSD--DPMSTCRKI 369
PFY D + S C+KI
Sbjct: 232 LQSPFYGDKMNLYSLCKKI 250
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 65/316 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A DFE + ++G+GAFG+V R YA+KK++ +E ++ + +E LLA ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLN 60
Query: 175 SNCIVKLYCSF-------------QDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFY 221
+V+ Y ++ + L++ MEY G + L+ ++ + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 222 VAETVL-AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK----PLDCSTLQEQDF 276
+ +L A+ IH IHRD+KP N+ +D+ ++++ DFGL K LD L Q
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ-- 178
Query: 277 TIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-YG 335
NL GSS N S +GT Y+A EVL G Y
Sbjct: 179 ----NLPGSSDN-------------------------LTSAIGTAMYVATEVLDGTGHYN 209
Query: 336 MECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFP---EEAKLSIEAKDLI 392
+ D +SLG I +EM+ YP + ++ +K+ + ++FP ++ K+ +E K I
Sbjct: 210 EKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRS--VSIEFPPDFDDNKMKVEKK--I 263
Query: 393 SKLLC--NVNQRLGAK 406
+LL + N+R GA+
Sbjct: 264 IRLLIDHDPNKRPGAR 279
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 136/319 (42%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 65
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 175
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
TP Y+APEVL + Y CD WSL
Sbjct: 176 EPCY--------------------------------TPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 204 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 263
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR+ E HPW
Sbjct: 264 PTQRM---TITEFMNHPWI 279
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 153/362 (42%), Gaps = 96/362 (26%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEM--LRRGQVEHVRAERNLLAEVDS 175
+ L IG+G++G VRV E T + A+K + K+++ + VE ++ E L+ ++
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL---------------------------- 207
I +LY ++D++++ L+ME GG ++ L
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 208 ----------------MRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLL-- 249
++++ L + R + A+ +H HRDIKP+N L
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMR----QIFSALHYLHNQGICHRDIKPENFLFST 203
Query: 250 DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKN 309
+K ++L DFGL K +F NN G A
Sbjct: 204 NKSFEIKLVDFGLSK----------EFYKLNN--GEYYGMTTKA---------------- 235
Query: 310 RRMLAYSTVGTPDYIAPEVL--LKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCR 367
GTP ++APEVL + YG +CD WS G +++ +L+G PF + T
Sbjct: 236 ---------GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTIS 286
Query: 368 KIVNWRTHLKFPEEAKLSIEAKDLISKLLC-NVNQRLGAKGADEIKVHPWFDGVDWARIY 426
+++N + + P LS A+DL+S LL NV++R A A + HPW +IY
Sbjct: 287 QVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ---HPWISQFS-DKIY 342
Query: 427 QM 428
+M
Sbjct: 343 KM 344
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFR-------------------------- 155
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 156 -------------YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + A +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINAML 62
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 158
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 204 GELPW--DQPSDSCQEYSDWK 222
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFR-------------------------- 156
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 157 -------------YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 204 GELPW--DQPSDSCQEYSDWK 222
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 133/319 (41%), Gaps = 71/319 (22%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRA--------- 111
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ E L GG++ + + + TE EA
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
AI+ +H + HRD+KP+NLL L+L+DFG K + T N+L
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTSHNSLT 221
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 343
+ TP Y+APEVL + Y CD WSL
Sbjct: 222 --------------------------------TPCYTPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 344 GAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CN 398
G I Y +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 250 GVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTE 309
Query: 399 VNQRLGAKGADEIKVHPWF 417
QR E HPW
Sbjct: 310 PTQR---XTITEFXNHPWI 325
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 62
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 204 GELPW--DQPSDSCQEYSDWK 222
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 52/273 (19%)
Query: 104 EYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL-KKSEMLRRGQVEH 162
+Y + R D +E++ +G GAFG+V + K T + A K + KSE ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELED 80
Query: 163 VRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD-TLTEDEARFY 221
E ++LA D IVKL +F + L++++E+ GG + +++ + LTE + +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 222 VAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNN 281
+T+ A+ +H + IHRD+K N+L G ++L+DFG+ + T+Q +D
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTIQRRD------ 193
Query: 282 LNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-----KKGYGM 336
S +GTP ++APEV++ + Y
Sbjct: 194 ----------------------------------SFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 337 ECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKI 369
+ D WSLG + EM PP + +PM KI
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 158
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 204 GELPW--DQPSDSCQEYSDWK 222
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 158
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 204 GELPW--DQPSDSCQEYSDWK 222
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 158
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 204 GELPW--DQPSDSCQEYSDWK 222
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 44/246 (17%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 78
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
I + + S+ L++IMEYL GG + LL + L E + E + ++ +H
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERK 137
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
IHRDIK N+LL + G ++L+DFG+ L + ++ F
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF--------------------- 176
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 177 --------------------VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN 216
Query: 358 YSDDPM 363
PM
Sbjct: 217 SDLHPM 222
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 60
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 156
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 157 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 201
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 202 GELPW--DQPSDSCQEYSDWK 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 65/316 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A DFE + ++G+GAFG+V R YA+KK++ +E ++ + +E LLA ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLN 60
Query: 175 SNCIVKLYCSF-------------QDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFY 221
+V+ Y ++ + L++ MEY + L+ ++ + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 222 VAETVL-AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK----PLDCSTLQEQDF 276
+ +L A+ IH IHRD+KP N+ +D+ ++++ DFGL K LD L Q
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ-- 178
Query: 277 TIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-YG 335
NL GSS N S +GT Y+A EVL G Y
Sbjct: 179 ----NLPGSSDN-------------------------LTSAIGTAMYVATEVLDGTGHYN 209
Query: 336 MECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFP---EEAKLSIEAKDLI 392
+ D +SLG I +EM+ YP + ++ +K+ + ++FP ++ K+ +E K I
Sbjct: 210 EKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRS--VSIEFPPDFDDNKMKVEKK--I 263
Query: 393 SKLLC--NVNQRLGAK 406
+LL + N+R GA+
Sbjct: 264 IRLLIDHDPNKRPGAR 279
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 137/312 (43%), Gaps = 55/312 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV--EHVRAERNLLAEV 173
D +EL +IGKG F VR C + TG +A+K + ++ + E ++ E ++ +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDM-MTLLMRKD---TLTEDEARFYVAETVLAI 229
IV+L ++ D LY++ E++ G D+ ++ R D +E A Y+ + + A+
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 230 ESIHKHHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
H ++ IHRD+KP +LL + ++L FG+ L S L
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--------------- 190
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+A VGTP ++APEV+ ++ YG D W G I
Sbjct: 191 --------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 224
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISK-LLCNVNQRLGA 405
++ +L G PFY I+ + + + + +S AKDL+ + L+ + +R+
Sbjct: 225 LFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV 283
Query: 406 KGADEIKVHPWF 417
E HPW
Sbjct: 284 Y---EALNHPWL 292
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 158
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 204 GELPW--DQPSDSCQEYSDWK 222
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 55/312 (17%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRG--QVEHVRAERNLLAEV 173
D +EL +IGKG F VR C + TG +A+K + ++ E ++ E ++ +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDM-MTLLMRKD---TLTEDEARFYVAETVLAI 229
IV+L ++ D LY++ E++ G D+ ++ R D +E A Y+ + + A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 230 ESIHKHHYIHRDIKPDNLLL---DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
H ++ IHRD+KP +LL + ++L FG+ L S L
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--------------- 188
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+A VGTP ++APEV+ ++ YG D W G I
Sbjct: 189 --------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISK-LLCNVNQRLGA 405
++ +L G PFY I+ + + + + +S AKDL+ + L+ + +R+
Sbjct: 223 LFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV 281
Query: 406 KGADEIKVHPWF 417
A HPW
Sbjct: 282 YEALN---HPWL 290
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 158
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 204 GELPW--DQPSDSCQEYSDWK 222
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 52/273 (19%)
Query: 104 EYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL-KKSEMLRRGQVEH 162
+Y + R D +E++ +G GAFG+V + K T + A K + KSE ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELED 80
Query: 163 VRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD-TLTEDEARFY 221
E ++LA D IVKL +F + L++++E+ GG + +++ + LTE + +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 222 VAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNN 281
+T+ A+ +H + IHRD+K N+L G ++L+DFG+
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV------------------- 181
Query: 282 LNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-----KKGYGM 336
+ K T+ Q RR S +GTP ++APEV++ + Y
Sbjct: 182 ------------SAKNTRXIQ-------RR---DSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 337 ECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKI 369
+ D WSLG + EM PP + +PM KI
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +T+ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYN------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P +C++ +W+
Sbjct: 203 GELPW--DQPSDSCQEYSDWK 221
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 52/273 (19%)
Query: 104 EYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL-KKSEMLRRGQVEH 162
+Y + R D +E++ +G GAFG+V + K T + A K + KSE ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELED 80
Query: 163 VRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD-TLTEDEARFY 221
E ++LA D IVKL +F + L++++E+ GG + +++ + LTE + +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 222 VAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNN 281
+T+ A+ +H + IHRD+K N+L G ++L+DFG+
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV------------------- 181
Query: 282 LNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-----KKGYGM 336
+ K T+ Q RR +GTP ++APEV++ + Y
Sbjct: 182 ------------SAKNTRXIQ-------RR---DXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 337 ECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKI 369
+ D WSLG + EM PP + +PM KI
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 59/263 (22%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A FEL+ ++G G +G+V R TG + A+K + + + E ++ E N+L +
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYS 78
Query: 175 SN-CIVKLYCSFQD------DEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAET 225
+ I Y +F D+ L+L+ME+ G + L+ + +TL E+ + E
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 138
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
+ + +H+H IHRDIK N+LL + ++L DFG+ LD + + F
Sbjct: 139 LRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF--------- 189
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-----KKGYGMECDW 340
+GTP ++APEV+ Y + D
Sbjct: 190 --------------------------------IGTPYWMAPEVIACDENPDATYDFKSDL 217
Query: 341 WSLGAIMYEMLVGYPPFYSDDPM 363
WSLG EM G PP PM
Sbjct: 218 WSLGITAIEMAEGAPPLCDMHPM 240
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEV 173
+D++L+ +G+GA+GEV++ + T A+K + +M R E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH 233
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
HRDIKP+NLLLD+ +L++SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 352
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 353 GYPPFYSDDPMSTCRKIVNWR 373
G P+ D P + ++ +W+
Sbjct: 203 GELPW--DQPSDSXQEYSDWK 221
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 65/304 (21%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMK--KLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKL 181
+G+G FG V C E ++ Y K K+K ++ + V+ E ++L I+ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISILNIARHRNILHL 66
Query: 182 YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDT----LTEDEARFYVAETVLAIESIHKHHY 237
+ SF+ E L +I E++ G D+ R +T L E E YV + A++ +H H+
Sbjct: 67 HESFESMEELVMIFEFISGLDIFE---RINTSAFELNEREIVSYVHQVCEALQFLHSHNI 123
Query: 238 IHRDIKPDNLLLD--KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
H DI+P+N++ + +++ +FG + L +P
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQL------------------------KPG-- 157
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
N R+L P+Y APEV D WSLG ++Y +L G
Sbjct: 158 ------------DNFRLL----FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201
Query: 356 PFYSDDPMSTCRKIVNWRTHLKFPEEA--KLSIEAKDLISKLLCNVNQRLGAKGADEIKV 413
PF ++ I+N F EEA ++SIEA D + +LL V +R A E
Sbjct: 202 PFLAETNQQIIENIMN--AEYTFDEEAFKEISIEAMDFVDRLL--VKERKSRMTASEALQ 257
Query: 414 HPWF 417
HPW
Sbjct: 258 HPWL 261
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 65/316 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
A DFE + ++G+GAFG+V R YA+KK++ +E ++ + +E LLA ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLASLN 60
Query: 175 SNCIVKLYCSF-------------QDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFY 221
+V+ Y ++ + L++ EY + L+ ++ + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 222 VAETVL-AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK----PLDCSTLQEQDF 276
+ +L A+ IH IHR++KP N+ +D+ ++++ DFGL K LD L Q
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ-- 178
Query: 277 TIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-YG 335
NL GSS N S +GT Y+A EVL G Y
Sbjct: 179 ----NLPGSSDN-------------------------LTSAIGTAXYVATEVLDGTGHYN 209
Query: 336 MECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFP---EEAKLSIEAKDLI 392
+ D +SLG I +E + YP + ++ +K+ + ++FP ++ K +E K I
Sbjct: 210 EKIDXYSLGIIFFEXI--YPFSTGXERVNILKKLRS--VSIEFPPDFDDNKXKVEKK--I 263
Query: 393 SKLLC--NVNQRLGAK 406
+LL + N+R GA+
Sbjct: 264 IRLLIDHDPNKRPGAR 279
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 46/259 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK---KSEMLRRGQVEHVRAERNLLA 171
A +E L +G+G F V R+K T + A+KK+K +SE + G E LL
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA-KDGINRTALREIKLLQ 67
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
E+ I+ L +F + L+ +++ + + LT + Y+ T+ +E
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H+H +HRD+KP+NLLLD+ G L+L+DFGL K
Sbjct: 128 LHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF------------------------- 162
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEM 350
+P R Q V T Y APE+L + YG+ D W++G I+ E+
Sbjct: 163 -GSPNRAYXHQ---------------VVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
Query: 351 LVGYPPFYSDDPMSTCRKI 369
L+ P D + +I
Sbjct: 207 LLRVPFLPGDSDLDQLTRI 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 107 RLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE 166
R+ RH + +EL+ +GKGA+G V ++ TG V A+KK+ + + E
Sbjct: 2 RVDRHVLRK--YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFRE 58
Query: 167 RNLLAEVDSN-CIVKLYCSFQ--DDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA 223
+L E+ + IV L + +D +YL+ +Y+ + ++R + L ++ V
Sbjct: 59 IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVY 116
Query: 224 ETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
+ + I+ +H +HRD+KP N+LL+ H++++DFGL + + + N N
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 342
+ ++++P + V T Y APE+LL Y D WS
Sbjct: 177 TENFDDDQP--------------------ILTDYVATRWYRAPEILLGSTKYTKGIDMWS 216
Query: 343 LGAIMYEMLVGYPPFYSDDPMSTCRKIV 370
LG I+ E+L G P F M+ +I+
Sbjct: 217 LGCILGEILCGKPIFPGSSTMNQLERII 244
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 31/259 (11%)
Query: 101 KETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRG 158
+E Y + ++ D++ + +IG+G++G V + +K T A+KK+ + +++
Sbjct: 11 RENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI--- 67
Query: 159 QVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFL-----YLIMEYLPGGDMMTLLMRKDTL 213
+ + E +L + S+ I++LY D+ L Y+++E + D+ L L
Sbjct: 68 DCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFL 126
Query: 214 TEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQE 273
TE+ + + +L IH+ IHRD+KP N LL++ +++ DFGL + ++ E
Sbjct: 127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN----SE 182
Query: 274 QDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKK 332
+D I N+L + NE P + ++QL S V T Y APE +LL++
Sbjct: 183 KDTNIVNDL----EENEEPGPHNKNLKKQLT-----------SHVVTRWYRAPELILLQE 227
Query: 333 GYGMECDWWSLGAIMYEML 351
Y D WS G I E+L
Sbjct: 228 NYTKSIDIWSTGCIFAELL 246
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 47/250 (18%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL-LAEVDSNCIVKLY 182
+G+G+FGEV +K TG A+KK++ +E RAE + A + S IV LY
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
+ ++ ++ + ME L GG + L+ + L ED A +Y+ + + +E +H +H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 243 KPDNLLLDKYG-HLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQE 301
K DN+LL G H L DFG L L +D G+ +
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCLQPDGLG-KDLLTGDYIP------------------ 233
Query: 302 QLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 361
GT ++APEV+L + + D WS +M ML G P+
Sbjct: 234 -----------------GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF 276
Query: 362 PMSTCRKIVN 371
C KI +
Sbjct: 277 RGPLCLKIAS 286
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 51/304 (16%)
Query: 99 EKKETEYMRLQRHKMGA---DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEML 155
++K E Q+ K+G DDFE ++ +G G G V K +G V A +KL E+
Sbjct: 5 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK 63
Query: 156 RRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTE 215
+ + +R E +L E +S IV Y +F D + + ME++ GG + +L + + E
Sbjct: 64 PAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 122
Query: 216 DEARFYVAETVLAIESIH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQ 274
+ + + KH +HRD+KP N+L++ G ++L DFG+ L S
Sbjct: 123 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----- 177
Query: 275 DFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY 334
+A S VGT Y++PE L Y
Sbjct: 178 --------------------------------------MANSFVGTRSYMSPERLQGTHY 199
Query: 335 GMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPE--EAKLSIEAKDLI 392
++ D WS+G + EM VG P S +++++ + P+ S+E +D +
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 259
Query: 393 SKLL 396
+K L
Sbjct: 260 NKCL 263
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 56/313 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAE 172
+D +EL ++G G EV + R+ A+K L+ L R ++R R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 173 VDSNCIVKLYCSFQDD----EFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
++ IV +Y + + + Y++MEY+ G + ++ + +T A +A+ A
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H++ IHRD+KP N+++ +++ DFG+ + + S GN++ ++
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS---------GNSVTQTA-- 177
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
+ +GT Y++PE D +SLG ++Y
Sbjct: 178 ---------------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK---LSIEAKDLISKLLC----NVNQ 401
E+L G PPF D P+S + V P A+ LS + ++ K L N Q
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 402 RLGAKGADEIKVH 414
AD ++VH
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 47/250 (18%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL-LAEVDSNCIVKLY 182
+G+G+FGEV +K TG A+KK++ +E RAE + A + S IV LY
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
+ ++ ++ + ME L GG + L+ + L ED A +Y+ + + +E +H +H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 243 KPDNLLLDKYG-HLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQE 301
K DN+LL G H L DFG + Q +G +L
Sbjct: 212 KADNVLLSSDGSHAALCDFG-------HAVCLQPDGLGKSL------------------- 245
Query: 302 QLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 361
+ GT ++APEV+L + + D WS +M ML G P+
Sbjct: 246 ----------LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF 295
Query: 362 PMSTCRKIVN 371
C KI +
Sbjct: 296 RGPLCLKIAS 305
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 52/255 (20%)
Query: 123 MIGK-GAFGEVRVCREKTTGHVYAMKKL-KKSEMLRRGQVEHVRAERNLLAEVDSNCIVK 180
+IG+ G FG+V + K T + A K + KSE ++E E ++LA D IVK
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEIDILASCDHPNIVK 71
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD-TLTEDEARFYVAETVLAIESIHKHHYIH 239
L +F + L++++E+ GG + +++ + LTE + + +T+ A+ +H + IH
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 240 RDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
RD+K N+L G ++L+DFG+ S N R +R
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGV-----------------------SAKNTRTXIQRRD- 167
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-----KKGYGMECDWWSLGAIMYEMLVGY 354
S +GTP ++APEV++ + Y + D WSLG + EM
Sbjct: 168 ----------------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 211
Query: 355 PPFYSDDPMSTCRKI 369
PP + +PM KI
Sbjct: 212 PPHHELNPMRVLLKI 226
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 56/313 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAE 172
+D +EL ++G G EV + R+ A+K L+ L R ++R R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 173 VDSNCIVKLYCSFQDD----EFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
++ IV +Y + + + Y++MEY+ G + ++ + +T A +A+ A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H++ IHRD+KP N+L+ +++ DFG+ + + S GN++ ++
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADS---------GNSVXQTA-- 177
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
+ +GT Y++PE D +SLG ++Y
Sbjct: 178 ---------------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK---LSIEAKDLISKLLC----NVNQ 401
E+L G PPF D P+S + V P A+ LS + ++ K L N Q
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 402 RLGAKGADEIKVH 414
AD ++VH
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 55/270 (20%)
Query: 99 EKKETEYMRLQRHKMGA---DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEML 155
++K E Q+ K+G DDFE ++ +G G G V K +G V A +KL E+
Sbjct: 48 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK 106
Query: 156 RRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTE 215
+ + +R E +L E +S IV Y +F D + + ME++ GG + +L + + E
Sbjct: 107 PAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 165
Query: 216 DEARFYVAETVLAIESI----HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTL 271
+ ++ I+ + KH +HRD+KP N+L++ G ++L DFG+ L S
Sbjct: 166 ---QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 220
Query: 272 QEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK 331
+A S VGT Y++PE L
Sbjct: 221 -----------------------------------------MANSFVGTRSYMSPERLQG 239
Query: 332 KGYGMECDWWSLGAIMYEMLVGYPPFYSDD 361
Y ++ D WS+G + EM VG P D
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPIPPPD 269
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 139/338 (41%), Gaps = 79/338 (23%)
Query: 114 GADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV 173
G ++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E+
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIE 230
+ IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------------------------ 153
Query: 291 RPAAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMY 348
P RT E + W Y APE+LL K Y D WSLG I
Sbjct: 154 --GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 349 EMLVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK--------- 383
EM+ F D + +I V W T + FP+ A+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 384 LSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
L + + L+S++L + N+R+ AK A HP+F V
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 140/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 64
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L D+ T M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKTF-MDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 156
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 157 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 201 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 261 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 49/247 (19%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSE---MLRRGQVEHVRAERNLLAEVD 174
+E L ++G+G++G V CR K TG + A+KK +S+ M+++ + ++ LL ++
Sbjct: 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK----LLKQLR 82
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
+V L + + YL+ E++ + L + + L + Y+ + + I H
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
H+ IHRDIKP+N+L+ + G ++L DFG + L AA
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTL--------------------------AA 176
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMYEMLVG 353
P ++ V T Y APE+L+ YG D W++G ++ EM +G
Sbjct: 177 PGEVYDDE---------------VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
Query: 354 YPPFYSD 360
P F D
Sbjct: 222 EPLFPGD 228
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 41/253 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ DF+L +++G+GA+G V K TG + A+KK++ + + E +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFK 67
Query: 175 SNCIVKLYCSFQDDEF-----LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ ++ + D F +Y+I E + + ++ L++D ++++ +T+ A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H + IHRD+KP NLL++ L++ DFGL + +D S+ +N
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID----------------ESAADN 169
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGAIMY 348
P QQ + + V T Y APEV+L Y D WS G I+
Sbjct: 170 SEPTG----QQSGMTEY-----------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILA 214
Query: 349 EMLVGYPPFYSDD 361
E+ + P F D
Sbjct: 215 ELFLRRPIFPGRD 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 56/313 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAE 172
+D +EL ++G G EV + R+ A+K L+ L R ++R R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 173 VDSNCIVKLYCSFQDD----EFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
++ IV +Y + + + Y++MEY+ G + ++ + +T A +A+ A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H++ IHRD+KP N+++ +++ DFG+ + + S GN++ ++
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS---------GNSVTQTA-- 177
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
+ +GT Y++PE D +SLG ++Y
Sbjct: 178 ---------------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK---LSIEAKDLISKLLC----NVNQ 401
E+L G PPF D P+S + V P A+ LS + ++ K L N Q
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 402 RLGAKGADEIKVH 414
AD ++VH
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 126/287 (43%), Gaps = 58/287 (20%)
Query: 79 KKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREK 138
KKL + ++ E+ + L FL +K+ + ++ DDFE ++ +G G G V K
Sbjct: 2 KKLEELELDEQQRKRLEAFLTQKQ------KVGELKDDDFEKISELGAGNGGVVFKVSHK 55
Query: 139 TTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYL 198
+G V A +KL E+ + + +R E +L E +S IV Y +F D + + ME++
Sbjct: 56 PSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113
Query: 199 PGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI----HKHHYIHRDIKPDNLLLDKYGH 254
GG + +L + + E + ++ I+ + KH +HRD+KP N+L++ G
Sbjct: 114 DGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 170
Query: 255 LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLA 314
++L DFG+ L S +A
Sbjct: 171 IKLCDFGVSGQLIDS-------------------------------------------MA 187
Query: 315 YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 361
S VGT Y++PE L Y ++ D WS+G + EM VG P D
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 56/313 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAE 172
+D +EL ++G G EV + R+ A+K L+ L R ++R R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 173 VDSNCIVKLYCSFQDD----EFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
++ IV +Y + + + Y++MEY+ G + ++ + +T A +A+ A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H++ IHRD+KP N+++ +++ DFG+ + + S GN++ ++
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS---------GNSVTQTA-- 177
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
+ +GT Y++PE D +SLG ++Y
Sbjct: 178 ---------------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK---LSIEAKDLISKLLC----NVNQ 401
E+L G PPF D P+S + V P A+ LS + ++ K L N Q
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 402 RLGAKGADEIKVH 414
AD ++VH
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 41/253 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ DF+L +++G+GA+G V K TG + A+KK++ + + E +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFK 67
Query: 175 SNCIVKLYCSFQDDEF-----LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ ++ + D F +Y+I E + + ++ L++D ++++ +T+ A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H + IHRD+KP NLL++ L++ DFGL + +D S+ +N
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID----------------ESAADN 169
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGAIMY 348
P + E V T Y APEV+L Y D WS G I+
Sbjct: 170 SEPTGQQSGMTE---------------XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILA 214
Query: 349 EMLVGYPPFYSDD 361
E+ + P F D
Sbjct: 215 ELFLRRPIFPGRD 227
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 41/253 (16%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ DF+L +++G+GA+G V K TG + A+KK++ + + E +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFK 67
Query: 175 SNCIVKLYCSFQDDEF-----LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ ++ + D F +Y+I E + + ++ L++D ++++ +T+ A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H + IHRD+KP NLL++ L++ DFGL + +D S+ +N
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID----------------ESAADN 169
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGAIMY 348
P QQ + + V T Y APEV+L Y D WS G I+
Sbjct: 170 SEPTG----QQSGMVEF-----------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILA 214
Query: 349 EMLVGYPPFYSDD 361
E+ + P F D
Sbjct: 215 ELFLRRPIFPGRD 227
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 140/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 62
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L D+ M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP+NLL++ G ++L+DFGL +
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-------------------------- 154
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 155 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 199 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 259 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 49/251 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G+G+FGEV ++K TG A+KK++ E+ R VE + A A + S IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR---VEELVA----CAGLSSPRIVPLYG 117
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
+ ++ ++ + ME L GG + L+ + L ED A +Y+ + + +E +H +H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 244 PDNLLLDKYG-HLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
DN+LL G L DFG L Q +G +L
Sbjct: 178 ADNVLLSSDGSRAALCDFG-------HALCLQPDGLGKSL-------------------- 210
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF--YSD 360
+ GT ++APEV++ K + D WS +M ML G P+ Y
Sbjct: 211 ---------LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 261
Query: 361 DPMSTCRKIVN 371
P+ C KI +
Sbjct: 262 GPL--CLKIAS 270
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 140/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 64
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L D+ M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP+NLL++ G ++L+DFGL +
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-------------------------- 156
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 157 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 201 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 261 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 68
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 160
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 161 GVPVRTYTHEVVTLW----------------YRAPEILLGXKYYSTAVDIWSLGCIFAEM 204
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 205 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 264
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 265 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 297
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 139/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP+NLL++ G ++L+DFGL +
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-------------------------- 155
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 156 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 200 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 259
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 260 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 139/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 62
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP+NLL++ G ++L+DFGL +
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-------------------------- 154
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 155 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 199 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 259 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYTHEVVTLW----------------YRAPEILLGXKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 49/251 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G+G+FGEV ++K TG A+KK++ E+ R VE + A A + S IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR---VEELVA----CAGLSSPRIVPLYG 133
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
+ ++ ++ + ME L GG + L+ + L ED A +Y+ + + +E +H +H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 244 PDNLLLDKYG-HLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
DN+LL G L DFG L Q +G +L
Sbjct: 194 ADNVLLSSDGSRAALCDFG-------HALCLQPDGLGKSL-------------------- 226
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF--YSD 360
+ GT ++APEV++ K + D WS +M ML G P+ Y
Sbjct: 227 ---------LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 277
Query: 361 DPMSTCRKIVN 371
P+ C KI +
Sbjct: 278 GPL--CLKIAS 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 56/313 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAE 172
+D +EL ++G G EV + R+ A+K L+ L R ++R R A
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 85
Query: 173 VDSNCIVKLYCSFQDD----EFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
++ IV +Y + + + Y++MEY+ G + ++ + +T A +A+ A
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 145
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H++ IHRD+KP N+++ +++ DFG+ + + S GN++ ++
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS---------GNSVTQTA-- 194
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
+ +GT Y++PE D +SLG ++Y
Sbjct: 195 ---------------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 227
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK---LSIEAKDLISKLLC----NVNQ 401
E+L G PPF D P+S + V P A+ LS + ++ K L N Q
Sbjct: 228 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 284
Query: 402 RLGAKGADEIKVH 414
AD ++VH
Sbjct: 285 TAAEMRADLVRVH 297
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 49/251 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G+G+FGEV ++K TG A+KK++ E+ R VE + A A + S IV LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR---VEELVA----CAGLSSPRIVPLYG 131
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIK 243
+ ++ ++ + ME L GG + L+ + L ED A +Y+ + + +E +H +H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 244 PDNLLLDKYG-HLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
DN+LL G L DFG L Q +G +L
Sbjct: 192 ADNVLLSSDGSRAALCDFG-------HALCLQPDGLGKSL-------------------- 224
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF--YSD 360
+ GT ++APEV++ K + D WS +M ML G P+ Y
Sbjct: 225 ---------LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 275
Query: 361 DPMSTCRKIVN 371
P+ C KI +
Sbjct: 276 GPL--CLKIAS 284
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 139/338 (41%), Gaps = 83/338 (24%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTL--LMRKDTLTEDE---ARFYVAETVLAIE 230
IVKL + LYL+ E+L M L M LT + Y+ + + +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLS----MDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------------------------ 155
Query: 291 RPAAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMY 348
P RT E + W Y APE+LL K Y D WSLG I
Sbjct: 156 --GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFA 197
Query: 349 EMLVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK--------- 383
EM+ F D + +I V W T + FP+ A+
Sbjct: 198 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 257
Query: 384 LSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
L + + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 LDEDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 292
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 61/264 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-LLAEVD 174
DD+EL +IG GA V+ Y K K+ ++R +E + + LL E+
Sbjct: 15 DDYELQEVIGSGATAVVQAA--------YCAPK-KEKVAIKRINLEKCQTSMDELLKEIQ 65
Query: 175 --SNC----IVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--------MRKDTLTEDEARF 220
S C IV Y SF + L+L+M+ L GG ++ ++ + L E
Sbjct: 66 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ E + +E +HK+ IHRD+K N+LL + G ++++DFG+ L G
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL----------ATGG 175
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECD 339
++ R + + VGTP ++APEV+ + +GY + D
Sbjct: 176 DI--------------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 209
Query: 340 WWSLGAIMYEMLVGYPPFYSDDPM 363
WS G E+ G P++ PM
Sbjct: 210 IWSFGITAIELATGAAPYHKYPPM 233
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 139/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP+NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 68
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 160
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 161 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 204
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 205 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 264
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 265 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 297
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 140/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E++ D+ T M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV-HQDLKTF-MDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 152
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 153 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 65
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 157
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 158 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 202 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 261
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 262 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 294
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 136/332 (40%), Gaps = 74/332 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L +G+G +G V ++ + G + A+K+++ + G E +LL E+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPN 80
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
IV L + L L+ E++ L K L + + + Y+ + + + H+H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
+HRD+KP NLL++ G L+L+DFGL + P R
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAF--------------------------GIPVR 174
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPP 356
+ + V T Y AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 175 SYTHE---------------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 357 F---YSDDPMSTCRKIVNWRTHLKFPEEAKLSI-----------------------EAKD 390
F DD + I+ ++P+ +L + E D
Sbjct: 220 FPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGID 279
Query: 391 LISKLLC-NVNQRLGAKGADEIKVHPWFDGVD 421
L+S +LC + N+R+ A+ A HP+F +D
Sbjct: 280 LLSNMLCFDPNKRISARDAMN---HPYFKDLD 308
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 136/332 (40%), Gaps = 74/332 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L +G+G +G V ++ + G + A+K+++ + G E +LL E+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPN 80
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
IV L + L L+ E++ L K L + + + Y+ + + + H+H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
+HRD+KP NLL++ G L+L+DFGL + P R
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAF--------------------------GIPVR 174
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPP 356
+ + V T Y AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 175 SYTHE---------------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 357 F---YSDDPMSTCRKIVNWRTHLKFPEEAKLSI-----------------------EAKD 390
F DD + I+ ++P+ +L + E D
Sbjct: 220 FPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGID 279
Query: 391 LISKLLC-NVNQRLGAKGADEIKVHPWFDGVD 421
L+S +LC + N+R+ A+ A HP+F +D
Sbjct: 280 LLSNMLCFDPNKRISARDAMN---HPYFKDLD 308
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 62
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 154
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 155 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 199 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 259 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 155
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 156 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 200 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 259
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 260 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 292
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 139/338 (41%), Gaps = 83/338 (24%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 64
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTL--LMRKDTLTEDE---ARFYVAETVLAIE 230
IVKL + LYL+ E+L M L M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL----SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------------------------ 156
Query: 291 RPAAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMY 348
P RT E + W Y APE+LL K Y D WSLG I
Sbjct: 157 --GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFA 198
Query: 349 EMLVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK--------- 383
EM+ F D + +I V W T + FP+ A+
Sbjct: 199 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
Query: 384 LSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
L + + L+S++L + N+R+ AK A HP+F V
Sbjct: 259 LDEDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 64
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 156
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 157 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 201 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 261 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 155
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 156 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 200 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 259
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 260 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 292
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 132/313 (42%), Gaps = 56/313 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAE 172
+D +EL ++G G EV + R+ A+K L+ L R ++R R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 173 VDSNCIVKLYCSFQDD----EFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
++ IV +Y + + + Y++MEY+ G + ++ + +T A +A+ A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ H++ IHRD+KP N+++ +++ DFG+ + + S GN++ ++
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS---------GNSVTQTA-- 177
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
+ +GT Y++PE D +SLG ++Y
Sbjct: 178 ---------------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 349 EMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAK---LSIEAKDLISKLLC----NVNQ 401
E+L G PPF D P S + V P A+ LS + ++ K L N Q
Sbjct: 211 EVLTGEPPFTGDSPDSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 402 RLGAKGADEIKVH 414
AD ++VH
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 152
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 153 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 65
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 157
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 158 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 202 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 261
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 262 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 294
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 152
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 153 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 152
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 153 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 64
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 156
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 157 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 201 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 261 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 152
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 153 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 62
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 154
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 155 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 199 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 259 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 62
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 154
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 155 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 199 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 259 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 61/264 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-LLAEVD 174
DD+EL +IG GA V+ Y K K+ ++R +E + + LL E+
Sbjct: 10 DDYELQEVIGSGATAVVQAA--------YCAPK-KEKVAIKRINLEKCQTSMDELLKEIQ 60
Query: 175 --SNC----IVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--------MRKDTLTEDEARF 220
S C IV Y SF + L+L+M+ L GG ++ ++ + L E
Sbjct: 61 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ E + +E +HK+ IHRD+K N+LL + G ++++DFG+ L G
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL----------ATGG 170
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECD 339
++ R + + VGTP ++APEV+ + +GY + D
Sbjct: 171 DI--------------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 204
Query: 340 WWSLGAIMYEMLVGYPPFYSDDPM 363
WS G E+ G P++ PM
Sbjct: 205 IWSFGITAIELATGAAPYHKYPPM 228
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 137/333 (41%), Gaps = 79/333 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWF 417
+ + L+S++L + N+R+ AK A HP+F
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFF 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 138/336 (41%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+KK++ +R E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 64
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E++ + M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHV--DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 156
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 157 GVPVRTYXHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 201 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 261 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 137/336 (40%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+ K++ +R E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 153
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 154 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 258 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 137/336 (40%), Gaps = 79/336 (23%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
++F+ + IG+G +G V R K TG V A+ K++ +R E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDE---ARFYVAETVLAIESI 232
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H H +HRD+KP NLL++ G ++L+DFGL +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------------------------- 152
Query: 293 AAPKRT-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
P RT E + W Y APE+LL K Y D WSLG I EM
Sbjct: 153 GVPVRTYTHEVVTLW----------------YRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Query: 351 LVGYPPFYSDDPMSTCRKI---------VNWR--THL-----KFPEEAK---------LS 385
+ F D + +I V W T + FP+ A+ L
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
Query: 386 IEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGV 420
+ + L+S++L + N+R+ AK A HP+F V
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 49/257 (19%)
Query: 109 QRHKMGA---DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
Q+ K+G DDFE ++ +G G G V + + +G + A +KL E+ + + +R
Sbjct: 6 QKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMA-RKLIHLEIKPAIRNQIIR- 63
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
E +L E +S IV Y +F D + + ME++ GG + +L + E+
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV 123
Query: 226 VLAIESIH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNG 284
+ + + KH +HRD+KP N+L++ G ++L DFG+ L S
Sbjct: 124 LRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--------------- 168
Query: 285 SSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 344
+A S VGT Y+APE L Y ++ D WS+G
Sbjct: 169 ----------------------------MANSFVGTRSYMAPERLQGTHYSVQSDIWSMG 200
Query: 345 AIMYEMLVGYPPFYSDD 361
+ E+ VG P D
Sbjct: 201 LSLVELAVGRYPIPPPD 217
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 60/293 (20%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
DDFE ++ +G G G V K +G V A +KL E+ + + +R E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI--- 232
IV Y +F D + + ME++ GG + +L + + E + ++ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 233 -HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
KH +HRD+KP N+L++ G ++L DFG+ L S
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------- 158
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ---------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 352 VGYPPFYSDD------PMSTCRKIVNWRTHLKFPE--EAKLSIEAKDLISKLL 396
VG P D P +++++ + P+ S+E +D ++K L
Sbjct: 198 VGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCL 250
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 49/242 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSE---MLRRGQVEHVRAERNLLAEVD 174
+E + IG+G++G V CR + TG + A+KK +SE ++++ + +R +L ++
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR----MLKQLK 60
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
+V L F+ L+L+ EY + L + + E + +T+ A+ HK
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
H+ IHRD+KP+N+L+ K+ ++L DFG + L G S + A
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFAR----------------LLTGPSDYYDDEVA 164
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVG 353
+ W Y +PE+L+ YG D W++G + E+L G
Sbjct: 165 TR---------W----------------YRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
Query: 354 YP 355
P
Sbjct: 200 VP 201
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 54/258 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKL-----KKSEMLRRGQVEHVRAERNLLAE 172
++++ +G G V + + A+K + +K E L+R + E + ++
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS-----SQ 67
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI 232
+ IV + ++D+ YL+MEY+ G + + L+ D A + + + I+
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H +HRDIKP N+L+D L++ DFG+ K L ++L +Q N
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL--------------TQTNH-- 171
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGM-EC-DWWSLGAIMYEM 350
+GT Y +PE KG EC D +S+G ++YEM
Sbjct: 172 ------------------------VLGTVQYFSPE--QAKGEATDECTDIYSIGIVLYEM 205
Query: 351 LVGYPPFYSDDPMSTCRK 368
LVG PPF + +S K
Sbjct: 206 LVGEPPFNGETAVSIAIK 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 60/288 (20%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
DDFE ++ +G G G V K +G V A +KL E+ + + +R E +L E +S
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 66
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI--- 232
IV Y +F D + + ME++ GG + +L + + E + ++ I+ +
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 123
Query: 233 -HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
KH +HRD+KP N+L++ G ++L DFG+ L + E
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDE------------------ 161
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+A VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 162 ---------------------MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 200
Query: 352 VGYPPFYSDDPMSTCR---KIVNWRTHLKFPEEAKLSIEAKDLISKLL 396
VG Y PM+ IVN K P A S+E +D ++K L
Sbjct: 201 VGR---YPRPPMAIFELLDYIVN-EPPPKLP-SAVFSLEFQDFVNKCL 243
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 28/244 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRAERNLLAEV 173
D++E+ +IG+G++G V + +K A+KK+ + +++ + + E +L +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLI---DCKRILREITILNRL 84
Query: 174 DSNCIVKLYCSFQDDEFL-----YLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
S+ I++L+ ++ L Y+++E + D+ L LTE + + +L
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+ IH+ IHRD+KP N LL++ +++ DFGL + ++ ++D I N+L +
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTIN----SDKDIHIVNDL-EEKEE 198
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIM 347
NE P + ++QL S V T Y APE +LL++ Y D WS G I
Sbjct: 199 NEEPGPHNKNLKKQLT-----------SHVVTRWYRAPELILLQENYTNSIDIWSTGCIF 247
Query: 348 YEML 351
E+L
Sbjct: 248 AELL 251
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 52/250 (20%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
DDFE ++ +G G G V K +G V A +KL E+ + + +R E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI--- 232
IV Y +F D + + ME++ GG + +L + + E + ++ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 233 -HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
KH +HRD+KP N+L++ G ++L DFG+ L S
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------- 158
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ---------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 352 VGYPPFYSDD 361
VG P D
Sbjct: 198 VGRYPIPPPD 207
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 50/246 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKS--------EMLRRGQVEHVRAE 166
D++E++ IG GA+G V R + TG A+KK+ + LR ++
Sbjct: 54 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 167 RNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETV 226
N++A D I++ + + + +Y++++ + D+ ++ LT + R+++ + +
Sbjct: 114 DNIIAIKD---ILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+KP NLL+++ L++ DFG+ + L S + Q F
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF---------- 219
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 345
M Y V T Y APE++L Y D WS+G
Sbjct: 220 -------------------------MTEY--VATRWYRAPELMLSLHEYTQAIDLWSVGC 252
Query: 346 IMYEML 351
I EML
Sbjct: 253 IFGEML 258
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 52/250 (20%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
DDFE ++ +G G G V K +G V A +KL E+ + + +R E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI--- 232
IV Y +F D + + ME++ GG + +L + + E + ++ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 233 -HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
KH +HRD+KP N+L++ G ++L DFG+ L S
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------- 158
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ---------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 352 VGYPPFYSDD 361
VG P D
Sbjct: 198 VGRYPIPPPD 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 52/250 (20%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
DDFE ++ +G G G V K +G V A +KL E+ + + +R E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI--- 232
IV Y +F D + + ME++ GG + +L + + E + ++ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 233 -HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
KH +HRD+KP N+L++ G ++L DFG+ L S
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------- 158
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ---------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 352 VGYPPFYSDD 361
VG P D
Sbjct: 198 VGRYPIPPPD 207
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 52/250 (20%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
DDFE ++ +G G G V K +G V A +KL E+ + + +R E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI--- 232
IV Y +F D + + ME++ GG + +L + + E + ++ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 233 -HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
KH +HRD+KP N+L++ G ++L DFG+ L S
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------- 158
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ---------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 352 VGYPPFYSDD 361
VG P D
Sbjct: 198 VGRYPIPPPD 207
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 50/246 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKS--------EMLRRGQVEHVRAE 166
D++E++ IG GA+G V R + TG A+KK+ + LR ++
Sbjct: 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 167 RNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETV 226
N++A D I++ + + + +Y++++ + D+ ++ LT + R+++ + +
Sbjct: 113 DNIIAIKD---ILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+KP NLL+++ L++ DFG+ + L S + Q F
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF---------- 218
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 345
M Y V T Y APE++L Y D WS+G
Sbjct: 219 -------------------------MTEY--VATRWYRAPELMLSLHEYTQAIDLWSVGC 251
Query: 346 IMYEML 351
I EML
Sbjct: 252 IFGEML 257
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 108/260 (41%), Gaps = 60/260 (23%)
Query: 121 LTMIGKGAFGEVRVCREKTTGHVYAMKKLKK---SEMLRRGQVEHVRAERNLLAEVDSNC 177
L +G GA+G V + TG A+KKL + SE+ + +R LL +
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR----LLKHMRHEN 85
Query: 178 IVKLYCSFQDDEFL------YLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F DE L YL+M ++ G + LM+ + L ED +F V + + +
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRY 143
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D + + G
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD------------SEMXGXV----- 186
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ W Y APEV+L Y D WS+G IM EM
Sbjct: 187 -----------VTRW----------------YRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
+ G F D + ++I+
Sbjct: 220 ITGKTLFKGSDHLDQLKEIM 239
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 59/292 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-----HVRAERNLLAE 172
+ ++ +G GAFG V +K +K +KK ++L +E V E +L+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 173 VDSNCIVKLYCSFQDDEFLYLIME-YLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
V+ I+K+ F++ F L+ME + G D+ + R L E A + + V A+
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ IHRDIK +N+++ + ++L DFG L+
Sbjct: 146 LRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE------------------------ 181
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEM 350
R L Y+ GT +Y APEVL+ Y G E + WSLG +Y +
Sbjct: 182 ------------------RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
Query: 351 LVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQR 402
+ + ++P + V H + +S E L+S LL V +R
Sbjct: 224 V------FEENPFCELEETVEAAIHPPY----LVSKELMSLVSGLLQPVPER 265
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 134/330 (40%), Gaps = 85/330 (25%)
Query: 121 LTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVK 180
L IG+G +G V + G +A+KK++ E G E ++L E+ + IVK
Sbjct: 7 LEKIGEGTYGVVYKA-QNNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAETVLAIESIHKHHYIH 239
LY + L L+ E+L D+ LL + + L A+ ++ + + I H +H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 240 RDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
RD+KP NLL+++ G L+++DFGL + ++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPV-------------------------RKYT 158
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPPFY 358
E + W Y AP+VL+ K Y D WS+G I EM+ G P F
Sbjct: 159 HEVVTLW----------------YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202
Query: 359 SD------------------------------DPMSTCRKIVNWRTHLKFPEEAKLSIEA 388
DP T + + W + LK +E+ +
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI---- 258
Query: 389 KDLISKLL-CNVNQRLGAKGADEIKVHPWF 417
DL+SK+L + NQR+ AK A E H +F
Sbjct: 259 -DLLSKMLKLDPNQRITAKQALE---HAYF 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 134/330 (40%), Gaps = 85/330 (25%)
Query: 121 LTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVK 180
L IG+G +G V + G +A+KK++ E G E ++L E+ + IVK
Sbjct: 7 LEKIGEGTYGVVYKA-QNNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAETVLAIESIHKHHYIH 239
LY + L L+ E+L D+ LL + + L A+ ++ + + I H +H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 240 RDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
RD+KP NLL+++ G L+++DFGL + ++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPV-------------------------RKYT 158
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPPFY 358
E + W Y AP+VL+ K Y D WS+G I EM+ G P F
Sbjct: 159 HEVVTLW----------------YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFP 202
Query: 359 SD------------------------------DPMSTCRKIVNWRTHLKFPEEAKLSIEA 388
DP T + + W + LK +E+ +
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI---- 258
Query: 389 KDLISKLL-CNVNQRLGAKGADEIKVHPWF 417
DL+SK+L + NQR+ AK A E H +F
Sbjct: 259 -DLLSKMLKLDPNQRITAKQALE---HAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 134/330 (40%), Gaps = 85/330 (25%)
Query: 121 LTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVK 180
L IG+G +G V + G +A+KK++ E G E ++L E+ + IVK
Sbjct: 7 LEKIGEGTYGVVYKA-QNNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAETVLAIESIHKHHYIH 239
LY + L L+ E+L D+ LL + + L A+ ++ + + I H +H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 240 RDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
RD+KP NLL+++ G L+++DFGL + ++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPV-------------------------RKYT 158
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPPFY 358
E + W Y AP+VL+ K Y D WS+G I EM+ G P F
Sbjct: 159 HEIVTLW----------------YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202
Query: 359 SD------------------------------DPMSTCRKIVNWRTHLKFPEEAKLSIEA 388
DP T + + W + LK +E+ +
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI---- 258
Query: 389 KDLISKLL-CNVNQRLGAKGADEIKVHPWF 417
DL+SK+L + NQR+ AK A E H +F
Sbjct: 259 -DLLSKMLKLDPNQRITAKQALE---HAYF 284
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 103/244 (42%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 65
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L Q+++F +
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEFF------KVKE 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 176 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 207
Query: 348 YEML 351
YE+
Sbjct: 208 YELF 211
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 100/255 (39%), Gaps = 48/255 (18%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
F L IG G+FG V R+ V A+KK+ S + + + E L ++
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
++ + + +L+MEY G L + K L E E + + +H H+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
IHRD+K N+LL + G ++L DFG + AP
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIM---------------------------AP-- 167
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGY 354
A VGTP ++APEV+L + Y + D WSLG E+
Sbjct: 168 ----------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
Query: 355 PPFYSDDPMSTCRKI 369
PP ++ + MS I
Sbjct: 212 PPLFNMNAMSALYHI 226
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 100/255 (39%), Gaps = 48/255 (18%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
F L IG G+FG V R+ V A+KK+ S + + + E L ++
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
++ + + +L+MEY G L + K L E E + + +H H+
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
IHRD+K N+LL + G ++L DFG + AP
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIM---------------------------AP-- 206
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGY 354
A VGTP ++APEV+L + Y + D WSLG E+
Sbjct: 207 ----------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
Query: 355 PPFYSDDPMSTCRKI 369
PP ++ + MS I
Sbjct: 251 PPLFNMNAMSALYHI 265
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 65/272 (23%)
Query: 101 KETEYMRL--QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRG 158
K+T Y+ + QR++ +D E L +G G G+V R + TGHV A+K++++S
Sbjct: 8 KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG----N 63
Query: 159 QVEHVRAERNL---LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPG----------GDMMT 205
+ E+ R +L L D IV+ + +F + +++ ME + G +
Sbjct: 64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPE 123
Query: 206 LLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
++ K T+ +A +Y+ E KH IHRD+KP N+LLD+ G ++L DFG+
Sbjct: 124 RILGKMTVAIVKALYYLKE---------KHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
L + + S AP+R + PD
Sbjct: 175 L-----------VDDKAKDRSAGCAAYMAPER--------------------IDPPDPTK 203
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
P+ Y + D WSLG + E+ G P+
Sbjct: 204 PD------YDIRADVWSLGISLVELATGQFPY 229
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 138/337 (40%), Gaps = 77/337 (22%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEV-RVCREKTTGHVYAMKKLKKSEMLRRGQVE 161
TE + Q + + +L IG G +V +V EK +YA+K + L +
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQ 68
Query: 162 HVRAERNLLAEVD-----SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED 216
+ + RN +A ++ S+ I++LY D+++Y++ME D+ + L +K ++
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 127
Query: 217 EARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDF 276
E + Y + A+ +IH+H +H D+KP N L+ G L+L DFG+
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA------------- 173
Query: 277 TIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGM 336
N +P + Q VGT +Y+ PE +
Sbjct: 174 -----------NQMQPDTTSVVKDSQ---------------VGTVNYMPPEAIKDMSSSR 207
Query: 337 E-----------CDWWSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKL 384
E D WSLG I+Y M G PF + +S I++ ++FP+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---- 263
Query: 385 SIEAKDLISKLLCNV----NQRLGAKGADEIKVHPWF 417
I KDL L C + QR+ E+ HP+
Sbjct: 264 -IPEKDLQDVLKCCLKRDPKQRISIP---ELLAHPYV 296
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 57/260 (21%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLL 170
H A +E+L +IGKG+FG+V + A+K ++ + R E +R +L
Sbjct: 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 171 AEVDSNC--IVKLYCSFQDDEFLYLIMEYLPGGDMMTL--LMRKD---TLTEDEARFYVA 223
+ N ++ + +F + + E L M L L++K+ + R +
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 224 ETVLAIESIHKHHYIHRDIKPDNLLLDKYGH--LRLSDFGLCKPLDCSTLQEQDFTIGNN 281
+ ++++HK+ IH D+KP+N+LL + G +++ DFG
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-------------------- 247
Query: 282 LNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 341
S ++R Y+ + + Y APEV+L YGM D W
Sbjct: 248 --SSCYEHQR----------------------VYTXIQSRFYRAPEVILGARYGMPIDMW 283
Query: 342 SLGAIMYEMLVGYPPFYSDD 361
SLG I+ E+L GYP +D
Sbjct: 284 SLGCILAELLTGYPLLPGED 303
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 100/241 (41%), Gaps = 57/241 (23%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
F+ L+ +G G++GEV R K G +YA+K+ S RG + R LAEV S+
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR---SMSPFRGPKDRARK----LAEVGSH 110
Query: 177 -------CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
C V+L ++++ LYL E +L E + Y+ +T+LA+
Sbjct: 111 EKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLAL 170
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+H +H D+KP N+ L G +L DFGL L + G+ +
Sbjct: 171 AHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--------------GAGEVQ 216
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
E G P Y+APE LL+ YG D +SLG + E
Sbjct: 217 E----------------------------GDPRYMAPE-LLQGSYGTAADVFSLGLTILE 247
Query: 350 M 350
+
Sbjct: 248 V 248
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 57/260 (21%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLL 170
H A +E+L +IGKG+FG+V + A+K ++ + R E +R +L
Sbjct: 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 171 AEVDSNC--IVKLYCSFQDDEFLYLIMEYLPGGDMMTL--LMRKD---TLTEDEARFYVA 223
+ N ++ + +F + + E L M L L++K+ + R +
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 224 ETVLAIESIHKHHYIHRDIKPDNLLLDKYGH--LRLSDFGLCKPLDCSTLQEQDFTIGNN 281
+ ++++HK+ IH D+KP+N+LL + G +++ DFG
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-------------------- 247
Query: 282 LNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 341
S ++R Y+ + + Y APEV+L YGM D W
Sbjct: 248 --SSCYEHQR----------------------VYTXIQSRFYRAPEVILGARYGMPIDMW 283
Query: 342 SLGAIMYEMLVGYPPFYSDD 361
SLG I+ E+L GYP +D
Sbjct: 284 SLGCILAELLTGYPLLPGED 303
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 77/322 (23%)
Query: 118 FELLTMIGKGAFGEV-RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD-- 174
+ +L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 175 ---SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S+ I++LY D+++Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH+H +H D+KP N L+ G L+L DFG+ N +
Sbjct: 171 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA------------------------NQMQ 205
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 340
P + Q VGT +Y+ PE + E D
Sbjct: 206 PDTTSVVKDSQ---------------VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 250
Query: 341 WSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WSLG I+Y M G PF + +S I++ ++FP+ I KDL L C +
Sbjct: 251 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD-----IPEKDLQDVLKCCL 305
Query: 400 ----NQRLGAKGADEIKVHPWF 417
QR+ E+ HP+
Sbjct: 306 KRDPKQRISIP---ELLAHPYV 324
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKSQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGLC+ D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 102/249 (40%), Gaps = 49/249 (19%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ F+ L +G G + V KTTG A+K++K G E +L+ E+
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELK 61
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGG-----DMMTLLMRKDTLTEDEARFYVAETVLAI 229
IV+LY + L L+ E++ D T+ L + +++ + + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
H++ +HRD+KP NLL++K G L+L DFGL + G +N S
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR------------AFGIPVNTFS--- 166
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMY 348
S V T Y AP+VL+ + Y D WS G I+
Sbjct: 167 --------------------------SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILA 200
Query: 349 EMLVGYPPF 357
EM+ G P F
Sbjct: 201 EMITGKPLF 209
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 96
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 206
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 207 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 238
Query: 348 YEML 351
YE+
Sbjct: 239 YELF 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 72
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L Q
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-------------------PQ 173
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
+ E + E W APE L + + + D WS G ++
Sbjct: 174 DKEXXKV--KEPGESPIFW-----------------YAPESLTESKFSVASDVWSFGVVL 214
Query: 348 YEML 351
YE+
Sbjct: 215 YELF 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 68
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 178
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 179 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 210
Query: 348 YEML 351
YE+
Sbjct: 211 YELF 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 64
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 174
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 175 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 206
Query: 348 YEML 351
YE+
Sbjct: 207 YELF 210
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 77/336 (22%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEV-RVCREKTTGHVYAMKKLKKSEMLRRGQVE 161
TE + Q + + +L IG G +V +V EK +YA+K + L +
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQ 68
Query: 162 HVRAERNLLAEVD-----SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED 216
+ + RN +A ++ S+ I++LY D+++Y++ME D+ + L +K ++
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 127
Query: 217 EARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDF 276
E + Y + A+ +IH+H +H D+KP N L+ G L+L DFG+
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA------------- 173
Query: 277 TIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGM 336
N +P + Q VGT +Y+ PE +
Sbjct: 174 -----------NQMQPDXXXVVKDSQ---------------VGTVNYMPPEAIKDMSSSR 207
Query: 337 E-----------CDWWSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKL 384
E D WSLG I+Y M G PF + +S I++ ++FP+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---- 263
Query: 385 SIEAKDLISKLLCNV----NQRLGAKGADEIKVHPW 416
I KDL L C + QR+ E+ HP+
Sbjct: 264 -IPEKDLQDVLKCCLKRDPKQRISIP---ELLAHPY 295
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 70
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 180
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 181 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 212
Query: 348 YEML 351
YE+
Sbjct: 213 YELF 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 65
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 176 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 207
Query: 348 YEML 351
YE+
Sbjct: 208 YELF 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 65
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 176 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 207
Query: 348 YEML 351
YE+
Sbjct: 208 YELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 63
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 173
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 174 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 205
Query: 348 YEML 351
YE+
Sbjct: 206 YELF 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 69
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 179
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 180 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 211
Query: 348 YEML 351
YE+
Sbjct: 212 YELF 215
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 77/322 (23%)
Query: 118 FELLTMIGKGAFGEV-RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD-- 174
+ +L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 175 ---SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S+ I++LY D+++Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH+H +H D+KP N L+ G L+L DFG+ N +
Sbjct: 171 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA------------------------NQMQ 205
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 340
P + Q VGT +Y+ PE + E D
Sbjct: 206 PDTTSVVKDSQ---------------VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 250
Query: 341 WSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WSLG I+Y M G PF + +S I++ ++FP+ I KDL L C +
Sbjct: 251 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD-----IPEKDLQDVLKCCL 305
Query: 400 ----NQRLGAKGADEIKVHPWF 417
QR+ E+ HP+
Sbjct: 306 KRDPKQRISIP---ELLAHPYV 324
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEIL 71
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 181
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 182 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 213
Query: 348 YEML 351
YE+
Sbjct: 214 YELF 217
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 57/260 (21%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLL 170
H A +E+L +IGKG FG+V + A+K ++ + R E +R +L
Sbjct: 92 HDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 171 AEVDSNC--IVKLYCSFQDDEFLYLIMEYLPGGDMMTL--LMRKD---TLTEDEARFYVA 223
+ N ++ + +F + + E L M L L++K+ + R +
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 224 ETVLAIESIHKHHYIHRDIKPDNLLLDKYGH--LRLSDFGLCKPLDCSTLQEQDFTIGNN 281
+ ++++HK+ IH D+KP+N+LL + G +++ DFG
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-------------------- 247
Query: 282 LNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 341
S ++R Y + + Y APEV+L YGM D W
Sbjct: 248 --SSCYEHQR----------------------VYXXIQSRFYRAPEVILGARYGMPIDMW 283
Query: 342 SLGAIMYEMLVGYPPFYSDD 361
SLG I+ E+L GYP +D
Sbjct: 284 SLGCILAELLTGYPLLPGED 303
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 83
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L Q
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-------------------PQ 184
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
+ E + E W APE L + + + D WS G ++
Sbjct: 185 DKEXXKV--KEPGESPIFW-----------------YAPESLTESKFSVASDVWSFGVVL 225
Query: 348 YEML 351
YE+
Sbjct: 226 YELF 229
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 83
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 193
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 194 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 225
Query: 348 YEML 351
YE+
Sbjct: 226 YELF 229
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 77/322 (23%)
Query: 118 FELLTMIGKGAFGEV-RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD-- 174
+ +L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 64
Query: 175 ---SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S+ I++LY D+++Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 65 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH+H +H D+KP N L+ G L+L DFG+ N +
Sbjct: 124 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA------------------------NQMQ 158
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 340
P + Q VGT +Y+ PE + E D
Sbjct: 159 PDTTSVVKDSQ---------------VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 203
Query: 341 WSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WSLG I+Y M G PF + +S I++ ++FP+ I KDL L C +
Sbjct: 204 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD-----IPEKDLQDVLKCCL 258
Query: 400 ----NQRLGAKGADEIKVHPWF 417
QR+ E+ HP+
Sbjct: 259 KRDPKQRISIP---ELLAHPYV 277
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 66
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + K+ + + Y ++
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHR++ N+L++ +++ DFGL K L Q++++ +
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLP----QDKEYY------KVKE 176
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 177 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 208
Query: 348 YEML 351
YE+
Sbjct: 209 YELF 212
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLL--AEVDS 175
F++ IG+G F V + + V +K+ ++ + AE L A
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQL--QVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQD 80
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
N + YC F+ ++ + + M YL + +L ++L+ E R Y+ A++ IH+
Sbjct: 81 NVMGVKYC-FRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQF 136
Query: 236 HYIHRDIKPDNLL----LDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+HRD+KP N L L KY L DFGL + + ++ F +
Sbjct: 137 GIVHRDVKPSNFLYNRRLKKYA---LVDFGLAQGTHDTKIELLKFV------------QS 181
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
A +R Q + R+ +A GTP + APEVL K D WS G I +
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVA-PRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240
Query: 351 LVGYPPFY-SDDPMSTCRKIVNWR 373
L G PFY + D ++ +I+ R
Sbjct: 241 LSGRYPFYKASDDLTALAQIMTIR 264
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 88
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 146
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 182
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 183 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 223 LTGRTLFPGTDHIDQLKLIL 242
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 101
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 159
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 195
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 196 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 236 LTGRTLFPGTDHIDQLKLIL 255
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 102
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 160
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 196
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 197 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 237 LTGRTLFPGTDHIDQLKLIL 256
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 132/322 (40%), Gaps = 77/322 (23%)
Query: 118 FELLTMIGKGAFGEV-RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD-- 174
+ +L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 175 ---SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S+ I++LY D+++Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH+H +H D+KP N L+ G L+L DFG+ N +
Sbjct: 171 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA------------------------NQMQ 205
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 340
P + Q VG +Y+ PE + E D
Sbjct: 206 PDTTSVVKDSQ---------------VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 250
Query: 341 WSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WSLG I+Y M G PF + +S I++ ++FP+ I KDL L C +
Sbjct: 251 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD-----IPEKDLQDVLKCCL 305
Query: 400 ----NQRLGAKGADEIKVHPWF 417
QR+ E+ HP+
Sbjct: 306 KRDPKQRISIP---ELLAHPYV 324
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEIL 68
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVL 227
+ + IVK C L LIME+LP G + L + K+ + + Y ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 178
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 179 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 210
Query: 348 YEML 351
YE+
Sbjct: 211 YELF 214
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 102
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 160
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D + + G
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMXGX------ 202
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
V T Y APE++L Y D WS+G IM E+
Sbjct: 203 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 237 LTGRTLFPGTDHIDQLKLIL 256
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 77/322 (23%)
Query: 118 FELLTMIGKGAFGEV-RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD-- 174
+ +L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 67
Query: 175 ---SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S+ I++LY D+++Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 68 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH+H +H D+KP N L+ G L+L DFG+ N +
Sbjct: 127 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA------------------------NQMQ 161
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 340
P + Q VGT +Y+ PE + E D
Sbjct: 162 PDTTSVVKDSQ---------------VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 206
Query: 341 WSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WSLG I+Y M G PF + +S I++ ++FP+ I KDL L C +
Sbjct: 207 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD-----IPEKDLQDVLKCCL 261
Query: 400 ----NQRLGAKGADEIKVHPWF 417
QR+ E+ HP+
Sbjct: 262 KRDPKQRISIP---ELLAHPYV 280
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKK-SEMLRRGQVEHVRAERNLLAEVDSNCIVKL 181
++GKG FG+ + TG V MK+L + E +R ++ V+ R L + ++K
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL----EHPNVLKF 72
Query: 182 YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA-IESIHKHHYIHR 240
D+ L I EY+ GG + ++ D+ R A+ + + + +H + IHR
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 241 DIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQ 300
D+ N L+ + ++ ++DFGL R ++TQ
Sbjct: 133 DLNSHNCLVRENKNVVVADFGL---------------------------ARLMVDEKTQP 165
Query: 301 EQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
E L+ +K R Y+ VG P ++APE++ + Y + D +S G ++ E++
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 78
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 136
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 169
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 170 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 213 LTGRTLFPGTDHIDQLKLIL 232
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 92
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 150
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 186
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 187 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 226
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 227 LTGRTLFPGTDHIDQLKLIL 246
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D + + G
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMAG------- 181
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
V T Y APE++L Y D WS+G IM E+
Sbjct: 182 -------------------------FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D + + G
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMAG------- 181
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
V T Y APE++L Y D WS+G IM E+
Sbjct: 182 -------------------------FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 131/325 (40%), Gaps = 70/325 (21%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
Q ++ ADD E + +G+GA+G V R +G + A+K++ R V +R
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-------RATVNSQEQKRL 96
Query: 169 LL------AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGG---DMMTLLMRKDTLTEDEAR 219
L+ VD V Y + + +++ ME + ++ + T+ ED
Sbjct: 97 LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG 156
Query: 220 FYVAETVLAIESIH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTI 278
V A+E +H K IHRD+KP N+L++ G +++ DFG+ L S + D
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID--- 213
Query: 279 GNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEV----LLKKGY 334
G Y+APE L +KGY
Sbjct: 214 ---------------------------------------AGCKPYMAPERINPELNQKGY 234
Query: 335 GMECDWWSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLIS 393
++ D WSLG M E+ + P+ S P +++V + + P + K S E D S
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP-QLPAD-KFSAEFVDFTS 292
Query: 394 KLL-CNVNQRLGAKGADEIKVHPWF 417
+ L N +R E+ HP+F
Sbjct: 293 QCLKKNSKER---PTYPELMQHPFF 314
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 137/335 (40%), Gaps = 82/335 (24%)
Query: 118 FELLTMIGKGAFGEVRVCRE-KTTGHVYAMKKLK---KSEMLRRGQVEHVRAERNLLAEV 173
+E + IG+GA+G+V R+ K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 174 DSNCIVKLY--CSFQ--DDEF-LYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETV 226
N +V+L+ C+ D E L L+ E++ D+ T L + + + + + + + +
Sbjct: 73 HPN-VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H H +HRD+KP N+L+ G ++L+DFGL +
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR---------------------- 168
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+ +Q M S V T Y APEVLL+ Y D WS+G I
Sbjct: 169 ----------------IYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIV---------NWRTHLKFPEEAKLSIEA--------- 388
EM P F + KI+ +W + P +A S A
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 389 -----KDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
KDL+ K L N +R+ A A HP+F
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSALS---HPYF 300
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 78
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCAKLTDDHVQFLIYQILRGLKY 136
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 169
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 170 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 213 LTGRTLFPGTDHIDQLKLIL 232
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 77/322 (23%)
Query: 118 FELLTMIGKGAFGEV-RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD-- 174
+ +L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 63
Query: 175 ---SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S+ I++LY D+++Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 64 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 122
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH+H +H D+KP N L+ G L+L DFG+ N +
Sbjct: 123 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA------------------------NQMQ 157
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 340
P + Q VGT +Y+ PE + E D
Sbjct: 158 PDTTSVVKDSQ---------------VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 202
Query: 341 WSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNV 399
WSLG I+Y M G PF + +S I++ ++FP+ I KDL L C +
Sbjct: 203 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD-----IPEKDLQDVLKCCL 257
Query: 400 ----NQRLGAKGADEIKVHPWF 417
QR+ E+ HP+
Sbjct: 258 KRDPKQRISIP---ELLAHPYV 276
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 78
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 136
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D + + G
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMAG------- 177
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
V T Y APE++L Y D WS+G IM E+
Sbjct: 178 -------------------------FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 213 LTGRTLFPGTDHIDQLKLIL 232
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 64/278 (23%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
+R + D F++ M G+G FG V++ +EK+TG A+KK+ + R +++ ++
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD--- 72
Query: 169 LLAEVDSNCIVKLYCSF-------QDDEFLYLIMEYLPGGDMM-----TLLMRKDTLTED 216
LA + IV+L F + D +L ++MEY+P D + R+
Sbjct: 73 -LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPI 129
Query: 217 EARFYVAETVLAIESIH--KHHYIHRDIKPDNLLLDKY-GHLRLSDFGLCKPLDCSTLQE 273
+ ++ + + +I +H + HRDIKP N+L+++ G L+L DFG K L
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS------ 183
Query: 274 QDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KK 332
P+ P +AY + + Y APE++ +
Sbjct: 184 ------------------PSEPN----------------VAY--ICSRYYRAPELIFGNQ 207
Query: 333 GYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIV 370
Y D WS+G I EM++G P F D+ +IV
Sbjct: 208 HYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 118 FELLTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVR---AERNLL 170
+ L +GKG FG V +CR + TG V A+KKL+ S EH+R E +L
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEIL 68
Query: 171 AEVDSNCIVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVL 227
+ + IVK C L LIMEYLP G + L + + + Y ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E + YIHRD+ N+L++ +++ DFGL K L QD +
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQD----KEXXKVKE 178
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
E P + APE L + + + D WS G ++
Sbjct: 179 PGESPIF----------------------------WYAPESLTESKFSVASDVWSFGVVL 210
Query: 348 YEML 351
YE+
Sbjct: 211 YELF 214
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 32/247 (12%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKK--------SEMLRRGQVEHVRAER 167
D +E+ +IG G++G V +K V A+KK+ + +LR + + R
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILN-RLNH 111
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+ + +V I K F + LY+++E + D L LTE + + ++
Sbjct: 112 DHVVKVLDIVIPKDVEKFDE---LYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ +H +HRD+KP N L+++ +++ DFGL + +D NG+SQ
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE------------NGNSQ 215
Query: 288 NNERPAAPKRTQQE--QLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLG 344
P +P+ H + +R L V T Y APE +LL++ Y D WS+G
Sbjct: 216 ---LPISPREDDMNLVTFPHTKNLKRQLTGHVV-TRWYRAPELILLQENYTEAIDVWSIG 271
Query: 345 AIMYEML 351
I E+L
Sbjct: 272 CIFAELL 278
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + +G A+KKL + + E LL +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 111
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVT-HLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 169
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 205
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y M D WS+G IM E+
Sbjct: 206 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAEL 245
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D ++ ++I+
Sbjct: 246 LTGRTLFPGTDHINQLQQIM 265
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 137/335 (40%), Gaps = 82/335 (24%)
Query: 118 FELLTMIGKGAFGEVRVCRE-KTTGHVYAMKKLK---KSEMLRRGQVEHVRAERNLLAEV 173
+E + IG+GA+G+V R+ K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 174 DSNCIVKLY--CSFQ--DDEF-LYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETV 226
N +V+L+ C+ D E L L+ E++ D+ T L + + + + + + + +
Sbjct: 73 HPN-VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H H +HRD+KP N+L+ G ++L+DFGL +
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR---------------------- 168
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+ +Q M S V T Y APEVLL+ Y D WS+G I
Sbjct: 169 ----------------IYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIV---------NWRTHLKFPEEAKLSIEA--------- 388
EM P F + KI+ +W + P +A S A
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 389 -----KDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
KDL+ K L N +R+ A A HP+F
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSALS---HPYF 300
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 137/335 (40%), Gaps = 82/335 (24%)
Query: 118 FELLTMIGKGAFGEVRVCRE-KTTGHVYAMKKLK---KSEMLRRGQVEHVRAERNLLAEV 173
+E + IG+GA+G+V R+ K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 174 DSNCIVKLY--CSFQ--DDEF-LYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETV 226
N +V+L+ C+ D E L L+ E++ D+ T L + + + + + + + +
Sbjct: 73 HPN-VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H H +HRD+KP N+L+ G ++L+DFGL +
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR---------------------- 168
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+ +Q M S V T Y APEVLL+ Y D WS+G I
Sbjct: 169 ----------------IYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIV---------NWRTHLKFPEEAKLSIEA--------- 388
EM P F + KI+ +W + P +A S A
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 389 -----KDLISKLLC-NVNQRLGAKGADEIKVHPWF 417
KDL+ K L N +R+ A A HP+F
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSALS---HPYF 300
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---- 103
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+ N I++ + + + +YL+ +L G D+ LL + L+ D +++ + +
Sbjct: 104 -----IGINDIIRA-PTIEQMKDVYLV-THLMGADLYKLL-KTQHLSNDHICYFLYQILR 155
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA------------------------ 191
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 192 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 237
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 238 LAEMLSNRPIF 248
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KXQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL K + E LL +
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKP-FQSIIHAKRTYRELRLLKHMKHEN 94
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 152
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 188
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 189 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 229 LTGRTLFPGTDHIDQLKLIL 248
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ IG GA+G V + TG A+KKL + + E LL +
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 87
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 145
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------------------------ 181
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 182 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 222 LTGRTLFPGTDHIDQLKLIL 241
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 84
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 142
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD------------------------ 178
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 179 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 219 LTGRTLFPGTDHIDQLKLIL 238
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 88
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 146
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD------------------------ 182
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 183 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 223 LTGRTLFPGTDHIDQLKLIL 242
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KXQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 126/329 (38%), Gaps = 75/329 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
+E L IG+G +G V + + T + A+K+++ + G E LL E+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKN 62
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
IV+L+ D+ L L+ E+ L + + ++ + + + H +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
+HRD+KP NLL+++ G L+L+DFGL + P R
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAF--------------------------GIPVR 156
Query: 298 T-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYP 355
E + W Y P+VL K Y D WS G I E+
Sbjct: 157 CYSAEVVTLW----------------YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAAR 200
Query: 356 PFYS----DDPMSTCRKIVN------WRTHLKFPE----------------EAKLSIEAK 389
P + DD + +++ W + K P+ KL+ +
Sbjct: 201 PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGR 260
Query: 390 DLISKLL-CNVNQRLGAKGADEIKVHPWF 417
DL+ LL CN QR+ A+ A + HP+F
Sbjct: 261 DLLQNLLKCNPVQRISAEEALQ---HPYF 286
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 87
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 145
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------------------------ 181
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 182 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 222 LTGRTLFPGTDHIDQLKLIL 241
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TGH A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DF L + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 105
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 163
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 199
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 200 ------------------DEMXGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 240 LTGRTLFPGTDHIDQLKLIL 259
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 93
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 151
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------------------------ 187
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 188 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 228 LTGRTLFPGTDHIDQLKLIL 247
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 112/270 (41%), Gaps = 65/270 (24%)
Query: 102 ETEYMRLQRHKMGADDFELLTMIGKGAFGEV----------RVCREKTTG---HVYAMKK 148
E E ++ Q +G + L IG+GA+G V RV +K + Y +
Sbjct: 30 EVEMVKGQPFDVGPR-YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT 88
Query: 149 LKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM 208
L++ ++L R + E+V R++L + +Y I++ L D+ LL
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVY-----------IVQDLMETDLYKLL- 136
Query: 209 RKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDC 268
+ L+ D +++ + + ++ IH + +HRD+KP NLL++ L++ DFGL + D
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIAD- 195
Query: 269 STLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEV 328
E D T V T Y APE+
Sbjct: 196 ---PEHDHT----------------------------------GFLTEXVATRWYRAPEI 218
Query: 329 LL-KKGYGMECDWWSLGAIMYEMLVGYPPF 357
+L KGY D WS+G I+ EML P F
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 66/265 (24%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
Q A+D + L IG+GA+G V K +G + A+K++ R V+ + ++
Sbjct: 15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-------RSTVDE-KEQKQ 66
Query: 169 LLAEVD-----SNC--IVKLYCSFQDDEFLYLIMEYLPGG----DMMTLLMRKDTLTEDE 217
LL ++D S+C IV+ Y + + ++ ME + + D + E+
Sbjct: 67 LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEI 126
Query: 218 ARFYVAETVLAIESIHKH-HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDF 276
TV A+ + ++ IHRDIKP N+LLD+ G+++L DFG+ L S + +D
Sbjct: 127 LGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD- 185
Query: 277 TIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL----LKK 332
G Y+APE + ++
Sbjct: 186 -----------------------------------------AGCRPYMAPERIDPSASRQ 204
Query: 333 GYGMECDWWSLGAIMYEMLVGYPPF 357
GY + D WSLG +YE+ G P+
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 94
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 152
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 188
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 189 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 229 LTGRTLFPGTDHIDQLKLIL 248
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 94
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 152
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 188
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 189 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 229 LTGRTLFPGTDHIDQLKLIL 248
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 87
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 145
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 181
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 182 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 222 LTGRTLFPGTDHIDQLKLIL 241
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 126/329 (38%), Gaps = 75/329 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
+E L IG+G +G V + + T + A+K+++ + G E LL E+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKN 62
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
IV+L+ D+ L L+ E+ L + + ++ + + + H +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
+HRD+KP NLL+++ G L+L++FGL + P R
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAF--------------------------GIPVR 156
Query: 298 T-QQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEML-VGY 354
E + W Y P+VL K Y D WS G I E+ G
Sbjct: 157 CYSAEVVTLW----------------YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200
Query: 355 PPFYSDDPMSTCRKIV---------NWRTHLKFPE----------------EAKLSIEAK 389
P F +D ++I W + K P+ KL+ +
Sbjct: 201 PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGR 260
Query: 390 DLISKLL-CNVNQRLGAKGADEIKVHPWF 417
DL+ LL CN QR+ A+ A + HP+F
Sbjct: 261 DLLQNLLKCNPVQRISAEEALQ---HPYF 286
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 81
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 139
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 175
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 176 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 215
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 216 LTGRTLFPGTDHIDQLKLIL 235
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 131/312 (41%), Gaps = 56/312 (17%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL---LA 171
ADD E + +G+GA+G V R +G + A+K+++ + E R +L +
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT----VNSQEQKRLLMDLDISMR 61
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGG---DMMTLLMRKDTLTEDEARFYVAETVLA 228
VD V Y + + +++ ME + ++ + T+ ED V A
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 121
Query: 229 IESIH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+E +H K IHRD+KP N+L++ G +++ DFG+ G ++ ++
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS---------------GYLVDDVAK 166
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
+ + P P+ I PE L +KGY ++ D WSLG M
Sbjct: 167 DIDAGCKPYM----------------------APERINPE-LNQKGYSVKSDIWSLGITM 203
Query: 348 YEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLL-CNVNQRLGA 405
E+ + P+ S P +++V + P + K S E D S+ L N +R
Sbjct: 204 IELAILRFPYDSWGTPFQQLKQVVE-EPSPQLPAD-KFSAEFVDFTSQCLKKNSKER--- 258
Query: 406 KGADEIKVHPWF 417
E+ HP+F
Sbjct: 259 PTYPELMQHPFF 270
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 84
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 142
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 178
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 179 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 219 LTGRTLFPGTDHIDQLKLIL 238
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 89
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 147
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 183
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 184 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 224 LTGRTLFPGTDHIDQLKLIL 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 93
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 151
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 187
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 188 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 228 LTGRTLFPGTDHIDQLKLIL 247
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 84
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 142
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 178
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 179 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 219 LTGRTLFPGTDHIDQLKLIL 238
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 88
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 146
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 182
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 183 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 223 LTGRTLFPGTDHIDQLKLIL 242
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 84
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 142
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 175
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 176 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 219 LTGRTLFPGTDHIDQLKLIL 238
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 56/280 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK--KSEMLRRGQVEHVRAERNLLAEVD 174
DFE + +G+G FG V + K YA+K+++ E+ R + V+A LA+++
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA----LAKLE 61
Query: 175 SNCIVKLYCSFQDDE------------FLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYV 222
IV+ + ++ + +LY+ M+ ++ + + T+ E E +
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 223 ---AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIG 279
+ A+E +H +HRD+KP N+ +++ DFGL +D E++ T+
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD---QDEEEQTVL 178
Query: 280 NNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 339
+ PA + T Q VGT Y++PE + Y + D
Sbjct: 179 TPM---------PAYARHTGQ-----------------VGTKLYMSPEQIHGNSYSHKVD 212
Query: 340 WWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFP 379
+SLG I++E+L PF + M R + + R +LKFP
Sbjct: 213 IFSLGLILFELLY---PFSTQ--MERVRTLTDVR-NLKFP 246
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 101
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 159
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 195
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 196 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 236 LTGRTLFPGTDHIDQLKLIL 255
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 88
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 146
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 182
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 183 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 223 LTGRTLFPGTDHIDQLKLIL 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 102
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 160
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 196
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 197 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 237 LTGRTLFPGTDHIDQLKLIL 256
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 121 LTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ +GKG FG V +CR TG + A+K+L+ S Q + E +L + S+
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD 71
Query: 177 CIVKLY-CSFQDD-EFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVLAIESIH 233
IVK S+ + L L+MEYLP G + L R + L Y ++ +E +
Sbjct: 72 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK--PLDCSTLQEQDFTIGNNLNGSSQNNER 291
+HRD+ N+L++ H++++DFGL K PLD +D+ +
Sbjct: 132 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD------KDYYV------------- 172
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
R + W APE L + + D WS G ++YE+
Sbjct: 173 ----VREPGQSPIFW-----------------YAPESLSDNIFSRQSDVWSFGVVLYELF 211
Query: 352 V 352
Sbjct: 212 T 212
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D + + G
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMTGX------ 182
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 87
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 145
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 178
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 179 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 222 LTGRTLFPGTDHIDQLKLIL 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 105
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 163
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 196
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 197 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 240 LTGRTLFPGTDHIDQLKLIL 259
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 113
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 205
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 206 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 249
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 250 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 294
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 295 QIKAHPW 301
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 121 LTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ +GKG FG V +CR TG + A+K+L+ S Q + E +L + S+
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD 84
Query: 177 CIVKLY-CSFQDD-EFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVLAIESIH 233
IVK S+ + L L+MEYLP G + L R + L Y ++ +E +
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK--PLDCSTLQEQDFTIGNNLNGSSQNNER 291
+HRD+ N+L++ H++++DFGL K PLD +D+ +
Sbjct: 145 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD------KDYYV------------- 185
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
R + W APE L + + D WS G ++YE+
Sbjct: 186 ----VREPGQSPIFW-----------------YAPESLSDNIFSRQSDVWSFGVVLYELF 224
Query: 352 V 352
Sbjct: 225 T 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 79
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 137
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 170
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 171 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 214 LTGRTLFPGTDHIDQLKLIL 233
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 161/395 (40%), Gaps = 115/395 (29%)
Query: 122 TMIGKGAFGEVRVCREKTTGHVYAMKKLKK---SEMLRRGQ------VEHVRAERNLLAE 172
T +G GA+G V +K +G A+KKL + SE+ + ++H++ E N++
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGL 88
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI 232
+D +F D YL+M ++ D+ ++ K +E++ ++ V + + ++ I
Sbjct: 89 LDVFTPASSLRNFYD---FYLVMPFM-QTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYI 142
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H +HRD+KP NL +++ L++ DFGL + D
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA------------------------ 178
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 351
M Y V T Y APEV+L Y D WS+G IM EML
Sbjct: 179 ------------------EMTGY--VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218
Query: 352 VGYPPFYSDDPMSTCRKIVNW-----------------RTHLK-------------FPEE 381
G F D + +I+ +++++ FP
Sbjct: 219 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP-- 276
Query: 382 AKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVNDEL 440
+ S +A DL+ K+L +V++RL A A HP+F+ P + E
Sbjct: 277 -RASPQAADLLEKMLELDVDKRLTAAQA---LTHPFFE---------------PFRDPEE 317
Query: 441 DTQNFEKFEESDNQTKTSSKTGPWRKMLSSKDINF 475
+T+ + F++S K + W++ + + +NF
Sbjct: 318 ETEAQQPFDDSLEHEKLT--VDEWKQHIYKEIVNF 350
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 89
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 147
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA---------------------------- 179
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ T E M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 180 ----RHTADE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 224 LTGRTLFPGTDHIDQLKLIL 243
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 121 LTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ +GKG FG V +CR TG + A+K+L+ S Q + E +L + S+
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD 72
Query: 177 CIVKLY-CSFQDD-EFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVLAIESIH 233
IVK S+ + L L+MEYLP G + L R + L Y ++ +E +
Sbjct: 73 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK--PLDCSTLQEQDFTIGNNLNGSSQNNER 291
+HRD+ N+L++ H++++DFGL K PLD +D+ +
Sbjct: 133 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD------KDYYV------------- 173
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
R + W APE L + + D WS G ++YE+
Sbjct: 174 ----VREPGQSPIFW-----------------YAPESLSDNIFSRQSDVWSFGVVLYELF 212
Query: 352 V 352
Sbjct: 213 T 213
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 79
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 137
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 170
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 171 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 214 LTGRTLFPGTDHIDQLKLIL 233
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 78
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 136
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 169
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 170 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 213 LTGRTLFPGTDHIDQLKLIL 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL +
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------------- 173
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 174 ---------------HTDDEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 80
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 138
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL + D
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------------------ 174
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 175 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 215 LTGRTLFPGTDHIDQLKLIL 234
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 89
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 147
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA---------------------------- 179
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ T E M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 180 ----RHTADE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 224 LTGRTLFPGTDHIDQLKLIL 243
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 89
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 147
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ DFGL
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA---------------------------- 179
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
+ T E M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 180 ----RHTADE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 224 LTGRTLFPGTDHIDQLKLIL 243
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 117/293 (39%), Gaps = 63/293 (21%)
Query: 86 VSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+S+ +N +E ++ + L+R++ L IG GA G V + G A
Sbjct: 1 MSKSKVDNQFYSVEVADSTFTVLKRYQQ-------LKPIGSGAQGIVCAAFDTVLGINVA 53
Query: 146 MKKLKKSEMLRRGQVEHVRAERNL--LAEVDSNCIVKLYCSFQD----DEF--LYLIMEY 197
+KKL + + Q RA R L L V+ I+ L F +EF +YL+ME
Sbjct: 54 VKKLSRP---FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 198 LPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRL 257
+ + M D + + + + + I+ +H IHRD+KP N+++ L++
Sbjct: 111 MDANLCQVIHMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
DFGL + C+ N M Y
Sbjct: 168 LDFGLART-ACT---------------------------------------NFMMTPY-- 185
Query: 318 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIV 370
V T Y APEV+L GY D WS+G IM E++ G F D + K++
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVI 238
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 107/255 (41%), Gaps = 54/255 (21%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKS---EMLRRGQVEHVRAERNL 169
M +E + IG GA+G V R+ +GH A+K ++ E L V V R L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 170 LAEVDSNCIVKL--YC--SFQDDEF-LYLIMEYLPGGDMMTLLMRKDT--LTEDEARFYV 222
A N +V+L C S D E + L+ E++ D+ T L + L + + +
Sbjct: 61 EAFEHPN-VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
+ + ++ +H + +HRD+KP+N+L+ G ++L+DFGL +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------------------ 160
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
+ +Q M + V T Y APEVLL+ Y D WS
Sbjct: 161 --------------------IYSYQ----MALFPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 343 LGAIMYEMLVGYPPF 357
+G I EM P F
Sbjct: 197 VGCIFAEMFRRKPLF 211
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 113
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 205
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 206 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 249
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 250 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 294
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 295 QIKAHPW 301
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPA--TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFAFP 260
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 261 QIKAHPW 267
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 115
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 207
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 208 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 251
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 252 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 296
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 297 QIKAHPW 303
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFAFP 260
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 261 QIKAHPW 267
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 117
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 209
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 210 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 253
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 254 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 298
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 299 QIKAHPW 305
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 58/256 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
+E+ +G G FG V + TG A+K+ ++ L E E ++ +++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPN 74
Query: 178 IVKL------YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDT---LTEDEARFYVAETVLA 228
+V ++ L MEY GGD+ L + + L E R +++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRL----SDFGLCKPLDCSTLQEQDFTIGNNLNG 284
+ +H++ IHRD+KP+N++L G RL D G K LD
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQP-GPQRLIHKIIDLGYAKELD----------------- 176
Query: 285 SSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 344
Q E L VGT Y+APE+L +K Y + D+WS G
Sbjct: 177 --------------QGE-----------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 345 AIMYEMLVGYPPFYSD 360
+ +E + G+ PF +
Sbjct: 212 TLAFECITGFRPFLPN 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 91
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 183
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 184 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 227
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 228 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 272
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 273 QIKAHPW 279
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 58/256 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
+E+ +G G FG V + TG A+K+ ++ L E E ++ +++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPN 73
Query: 178 IVKL------YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDT---LTEDEARFYVAETVLA 228
+V ++ L MEY GGD+ L + + L E R +++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRL----SDFGLCKPLDCSTLQEQDFTIGNNLNG 284
+ +H++ IHRD+KP+N++L G RL D G K LD
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQP-GPQRLIHKIIDLGYAKELD----------------- 175
Query: 285 SSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 344
Q E L VGT Y+APE+L +K Y + D+WS G
Sbjct: 176 --------------QGE-----------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 345 AIMYEMLVGYPPFYSD 360
+ +E + G+ PF +
Sbjct: 211 TLAFECITGFRPFLPN 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 107
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 199
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 200 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 243
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 244 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 288
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 289 QIKAHPW 295
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ D+GL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 158
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 250
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 251 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 294
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 295 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 339
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 340 QIKAHPW 346
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 126/310 (40%), Gaps = 65/310 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEV 173
++ L ++GKG FG V T A+K + ++ +L + E LL +V
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 174 DSNC----IVKLYCSFQDDEFLYLIMEY-LPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
+ +++L F+ E L++E LP D+ + K L E +R + + V A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 229 IESIHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
I+ H +HRDIK +N+L+D + G +L DFG + L ++ +T +
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-----SGALLHDEPYTDFD------- 199
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAI 346
GT Y PE + + Y + WSLG +
Sbjct: 200 -------------------------------GTRVYSPPEWISRHQYHALPATVWSLGIL 228
Query: 347 MYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAK 406
+Y+M+ G PF D ++I+ L FP A +S + LI + C +
Sbjct: 229 LYDMVCGDIPFERD------QEILE--AELHFP--AHVSPDCCALIRR--CLAPKPSSRP 276
Query: 407 GADEIKVHPW 416
+EI + PW
Sbjct: 277 SLEEILLDPW 286
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 44/238 (18%)
Query: 121 LTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVK 180
L +G+G + V + K T ++ A+K+++ G E +LL ++ IV
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVT 64
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHR 240
L+ ++ L L+ EYL L + + + ++ + + + H+ +HR
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 241 DIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQ 300
D+KP NLL+++ G L+L+DFGL + T K
Sbjct: 125 DLKPQNLLINERGELKLADFGLARAKSIPT-------------------------KTYDN 159
Query: 301 EQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPPF 357
E + W Y P++LL Y + D W +G I YEM G P F
Sbjct: 160 EVVTLW----------------YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 87
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 179
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 180 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 223
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 224 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 268
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 269 QIKAHPW 275
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLL 170
H + + E+ ++G+GAFG VC+ K A+K+++ SE R+ + +R L
Sbjct: 4 HMIDYKEIEVEEVVGRGAFG--VVCKAKWRAKDVAIKQIE-SESERKAFIVELRQ----L 56
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEAR------FYVAE 224
+ V+ IVKLY + + + L+MEY GG + +L + L A ++
Sbjct: 57 SRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 114
Query: 225 TVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNG 284
V + S+ IHRD+KP NLLL G + L+ DF ++
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGG---------------TVLKICDFGTACDIQT 159
Query: 285 SSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 344
NN+ G+ ++APEV Y +CD +S G
Sbjct: 160 HMTNNK----------------------------GSAAWMAPEVFEGSNYSEKCDVFSWG 191
Query: 345 AIMYEMLVGYPPF 357
I++E++ PF
Sbjct: 192 IILWEVITRRKPF 204
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 98
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 190
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 191 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 234
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 235 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 279
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 280 QIKAHPW 286
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 84
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 176
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 177 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 220
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 221 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 265
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 266 QIKAHPW 272
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLL 170
H + + E+ ++G+GAFG VC+ K A+K+++ SE R+ + +R L
Sbjct: 3 HMIDYKEIEVEEVVGRGAFG--VVCKAKWRAKDVAIKQIE-SESERKAFIVELRQ----L 55
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEAR------FYVAE 224
+ V+ IVKLY + + + L+MEY GG + +L + L A ++
Sbjct: 56 SRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113
Query: 225 TVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNG 284
V + S+ IHRD+KP NLLL G + L+ DF ++
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGG---------------TVLKICDFGTACDIQT 158
Query: 285 SSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 344
NN+ G+ ++APEV Y +CD +S G
Sbjct: 159 HMTNNK----------------------------GSAAWMAPEVFEGSNYSEKCDVFSWG 190
Query: 345 AIMYEMLVGYPPF 357
I++E++ PF
Sbjct: 191 IILWEVITRRKPF 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 16/158 (10%)
Query: 121 LTMIGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
++ +GKG FG V +CR TG + A+K+L+ S Q + E +L + S+
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD 68
Query: 177 CIVKL----YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVLAIES 231
IVK Y + + L L+MEYLP G + L R + L Y ++ +E
Sbjct: 69 FIVKYRGVSYGPGRPE--LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK--PLD 267
+ +HRD+ N+L++ H++++DFGL K PLD
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 164
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 91
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 183
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 184 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 227
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 228 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 272
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 273 QIKAHPW 279
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDS 175
++ L IG GA G V + A+KKL + + Q RA R L + V+
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKVVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + ++ I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD---HERMSYLLYQMLVGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 46/242 (19%)
Query: 121 LTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCI-- 178
L+ IG+GA+G V + A+KK+ E Q +R + LLA N I
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENIIGI 88
Query: 179 --VKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
+ + + + +Y++ + L D+ LL + L+ D +++ + + ++ IH +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQD-LMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+KP NLLL+ L++ DFGL R A P
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLA---------------------------RVADPD 179
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYP 355
L + V T Y APE++L KGY D WS+G I+ EML P
Sbjct: 180 HDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 356 PF 357
F
Sbjct: 229 IF 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 161/395 (40%), Gaps = 115/395 (29%)
Query: 122 TMIGKGAFGEVRVCREKTTGHVYAMKKLKK---SEMLRRGQ------VEHVRAERNLLAE 172
T +G GA+G V +K +G A+KKL + SE+ + ++H++ E N++
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGL 106
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESI 232
+D +F D YL+M ++ D+ ++ + +E++ ++ V + + ++ I
Sbjct: 107 LDVFTPASSLRNFYD---FYLVMPFM-QTDLQKIMGME--FSEEKIQYLVYQMLKGLKYI 160
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
H +HRD+KP NL +++ L++ DFGL + D
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA------------------------ 196
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 351
M Y V T Y APEV+L Y D WS+G IM EML
Sbjct: 197 ------------------EMTGY--VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236
Query: 352 VGYPPFYSDDPMSTCRKIVNW-----------------RTHLK-------------FPEE 381
G F D + +I+ +++++ FP
Sbjct: 237 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP-- 294
Query: 382 AKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVNDEL 440
+ S +A DL+ K+L +V++RL A A HP+F+ P + E
Sbjct: 295 -RASPQAADLLEKMLELDVDKRLTAAQA---LTHPFFE---------------PFRDPEE 335
Query: 441 DTQNFEKFEESDNQTKTSSKTGPWRKMLSSKDINF 475
+T+ + F++S K + W++ + + +NF
Sbjct: 336 ETEAQQPFDDSLEHEKLT--VDEWKQHIYKEIVNF 368
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 260
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 261 QIKAHPW 267
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 92
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 184
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 185 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 228
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 229 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 273
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 274 QIKAHPW 280
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 79
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 260
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 261 QIKAHPW 267
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 83
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 175
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 176 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 219
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 220 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 264
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 265 QIKAHPW 271
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 80
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 172
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 173 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 216
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 217 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 261
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 262 QIKAHPW 268
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 79
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 260
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 261 QIKAHPW 267
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 36 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 96 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 143
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 179
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 180 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 225
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 226 LAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 171
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 172 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 104/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDS 175
++ L IG GA G V + G A+KKL + + Q RA R L L V+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP---FQNQTHAKRAYRELVLLKCVNH 80
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD---HERMSYLLYQMLCGI 137
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + ST
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAST------------------- 176
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
N M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 177 -------------------NFMMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
++ G F D + K++
Sbjct: 216 LVKGSVIFQGTDHIDQWNKVI 236
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA------------------------ 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ FGL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA------------------------ 171
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 172 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 90 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 137
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 173
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 174 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 219
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 220 LAEMLSNRPIF 230
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 46/242 (19%)
Query: 121 LTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCI-- 178
L+ IG+GA+G V + A+KK+ E Q +R + LLA N I
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENIIGI 88
Query: 179 --VKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH 236
+ + + + +Y++ + L D+ LL + L+ D +++ + + ++ IH +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQD-LMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
+HRD+KP NLLL+ L++ DFGL R A P
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLA---------------------------RVADPD 179
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYP 355
L + V T Y APE++L KGY D WS+G I+ EML P
Sbjct: 180 HDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 356 PF 357
F
Sbjct: 229 IF 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLA------------------------ 171
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 172 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 171
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 172 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 93 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 140
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 176
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 177 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 222
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 223 LAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 34 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 94 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 141
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 177
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 178 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 223
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 224 LAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 25 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 85 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 132
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 168
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 169 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 214
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 215 LAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA------------------------ 171
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 172 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 86 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 133
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 169
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 170 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 215
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 216 LAEMLSNRPIF 226
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 106/255 (41%), Gaps = 54/255 (21%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKS---EMLRRGQVEHVRAERNL 169
M +E + IG GA+G V R+ +GH A+K ++ E L V V R L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 170 LAEVDSNCIVKL--YC--SFQDDEF-LYLIMEYLPGGDMMTLLMRKDT--LTEDEARFYV 222
A N +V+L C S D E + L+ E++ D+ T L + L + + +
Sbjct: 61 EAFEHPN-VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
+ + ++ +H + +HRD+KP+N+L+ G ++L+DFGL +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------------------ 160
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
+ +Q M V T Y APEVLL+ Y D WS
Sbjct: 161 --------------------IYSYQ----MALAPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 343 LGAIMYEMLVGYPPF 357
+G I EM P F
Sbjct: 197 VGCIFAEMFRRKPLF 211
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 86 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 133
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 169
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 170 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 215
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 216 LAEMLSNRPIF 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA------------------------ 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDS 175
++ L IG GA G V + A+KKL + + Q RA R L + V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKVVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + ++ I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD---HERMSYLLYQMLVGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 60/257 (23%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA---ERNLLAEVDSNCIVK 180
+G GA+G V + A+KKL + + H R E LL + ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ----SLIHARRTYRELRLLKHLKHENVIG 91
Query: 181 LY------CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
L S +D +YL+ L G D+ ++ + L+++ +F V + + ++ IH
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNIV-KSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
IHRD+KP N+ +++ LR+ DFGL +
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLAR------------------------------ 179
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVG 353
Q + M Y V T Y APE++L Y D WS+G IM E+L G
Sbjct: 180 ------------QADEEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 354 YPPFYSDDPMSTCRKIV 370
F D + ++I+
Sbjct: 226 KALFPGSDYIDQLKRIM 242
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 79
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 260
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 261 QIKAHPW 267
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 53/250 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKK-LKKSE-------MLRRGQVEHVRAERNL 169
+E L IG+G FGEV R + TG A+KK L ++E LR ++ + N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPG--GDMMTLLMRKDTLTEDEARFYVAETVL 227
+ ++ C K + +YL+ ++ +++ ++ K TL+E + V + +L
Sbjct: 80 VNLIEI-CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR---VMQMLL 135
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
+ IH++ +HRD+K N+L+ + G L+L+DFGL + F++ N
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA----------FSLAKN----- 180
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGA 345
+ P R + W Y PE+LL ++ YG D W G
Sbjct: 181 ------SQPNRYXNRVVTLW----------------YRPPELLLGERDYGPPIDLWGAGC 218
Query: 346 IMYEMLVGYP 355
IM EM P
Sbjct: 219 IMAEMWTRSP 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 108 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 155
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 191
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 192 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 237
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 238 LAEMLSNRPIF 248
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ D GL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDS 175
++ L IG GA G V + A+KKL + + Q RA R L + V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKVVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + ++ I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD---HERMSYLLYQMLVGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KCQHLSNDHICYFLYQILR 139
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 ---RVADPDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 106/255 (41%), Gaps = 54/255 (21%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKS---EMLRRGQVEHVRAERNL 169
M +E + IG GA+G V R+ +GH A+K ++ E L V V R L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 170 LAEVDSNCIVKL--YC--SFQDDEF-LYLIMEYLPGGDMMTLLMRKDT--LTEDEARFYV 222
A N +V+L C S D E + L+ E++ D+ T L + L + + +
Sbjct: 61 EAFEHPN-VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
+ + ++ +H + +HRD+KP+N+L+ G ++L+DFGL +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------------------ 160
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
+ +Q M V T Y APEVLL+ Y D WS
Sbjct: 161 --------------------IYSYQ----MALDPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 343 LGAIMYEMLVGYPPF 357
+G I EM P F
Sbjct: 197 VGCIFAEMFRRKPLF 211
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ + ++ LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ D GL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
++ L+ +G GA+G V + TG A+KKL + + E LL +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 82
Query: 178 IVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++ L F +EF +YL+ +L G D+ ++ + LT+D +F + + + ++
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
IH IHRD+KP NL +++ L++ D GL + D
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTD------------------------ 176
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 350
M Y V T Y APE++L Y D WS+G IM E+
Sbjct: 177 ------------------DEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 351 LVGYPPFYSDDPMSTCRKIV 370
L G F D + + I+
Sbjct: 217 LTGRTLFPGTDHIDQLKLIL 236
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 53/250 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKK-LKKSE-------MLRRGQVEHVRAERNL 169
+E L IG+G FGEV R + TG A+KK L ++E LR ++ + N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPG--GDMMTLLMRKDTLTEDEARFYVAETVL 227
+ ++ C K + +YL+ ++ +++ ++ K TL+E + V + +L
Sbjct: 80 VNLIEI-CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR---VMQMLL 135
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
+ IH++ +HRD+K N+L+ + G L+L+DFGL + F++ N
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA----------FSLAKN----- 180
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGA 345
+ P R + W Y PE+LL ++ YG D W G
Sbjct: 181 ------SQPNRYXNRVVTLW----------------YRPPELLLGERDYGPPIDLWGAGC 218
Query: 346 IMYEMLVGYP 355
IM EM P
Sbjct: 219 IMAEMWTRSP 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 175
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L V T Y APE++L KGY D WS+G I
Sbjct: 176 ---RVADPDHDHTGFLX-----------EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 64/251 (25%)
Query: 121 LTMIGKGAFG----------EVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAER 167
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + +Y I++ L D+ LL + L+ D +++ + +
Sbjct: 93 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 140
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
++ IH + +HRD+KP NLLL+ L++ DFGL
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------------------------ 176
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAI 346
R A P L V T Y APE++L KGY D WS+G I
Sbjct: 177 ---RVADPDHDHTGFLX-----------EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 222
Query: 347 MYEMLVGYPPF 357
+ EML P F
Sbjct: 223 LAEMLSNRPIF 233
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 79/307 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + +G + A+KK+ + + + +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 79
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D +L L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 232 IHKHHYIHRDIKPDNLLLDK-YGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD L+L DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
+L+G P F D + +I+ L ++ I ++ N
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREM----NPNYTEFKFP 260
Query: 410 EIKVHPW 416
+IK HPW
Sbjct: 261 QIKAHPW 267
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 60/257 (23%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA---ERNLLAEVDSNCIVK 180
+G GA+G V + A+KKL + + H R E LL + ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ----SLIHARRTYRELRLLKHLKHENVIG 91
Query: 181 LY------CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
L S +D +YL+ L G D+ ++ + L+++ +F V + + ++ IH
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
IHRD+KP N+ +++ LR+ DFGL +
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLAR------------------------------ 179
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVG 353
Q + M Y V T Y APE++L Y D WS+G IM E+L G
Sbjct: 180 ------------QADEEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 354 YPPFYSDDPMSTCRKIV 370
F D + ++I+
Sbjct: 226 KALFPGSDYIDQLKRIM 242
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 53/250 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKK-LKKSE-------MLRRGQVEHVRAERNL 169
+E L IG+G FGEV R + TG A+KK L ++E LR ++ + N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPG--GDMMTLLMRKDTLTEDEARFYVAETVL 227
+ ++ C K + +YL+ ++ +++ ++ K TL+E + V + +L
Sbjct: 79 VNLIEI-CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR---VMQMLL 134
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
+ IH++ +HRD+K N+L+ + G L+L+DFGL + F++ N
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA----------FSLAKN----- 179
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGA 345
+ P R + W Y PE+LL ++ YG D W G
Sbjct: 180 ------SQPNRYXNRVVTLW----------------YRPPELLLGERDYGPPIDLWGAGC 217
Query: 346 IMYEMLVGYP 355
IM EM P
Sbjct: 218 IMAEMWTRSP 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 53/250 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKK-LKKSE-------MLRRGQVEHVRAERNL 169
+E L IG+G FGEV R + TG A+KK L ++E LR ++ + N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPG--GDMMTLLMRKDTLTEDEARFYVAETVL 227
+ ++ C K + +YL+ ++ +++ ++ K TL+E + V + +L
Sbjct: 80 VNLIEI-CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR---VMQMLL 135
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
+ IH++ +HRD+K N+L+ + G L+L+DFGL + F++ N
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA----------FSLAKN----- 180
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGA 345
+ P R + W Y PE+LL ++ YG D W G
Sbjct: 181 ------SQPNRYXNRVVTLW----------------YRPPELLLGERDYGPPIDLWGAGC 218
Query: 346 IMYEMLVGYP 355
IM EM P
Sbjct: 219 IMAEMWTRSP 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDS 175
++ L IG GA G V + A+KKL + + Q RA R L + V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKVVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 63/280 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E + P D+ + + L E+ AR + + + A+
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 174
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 175 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 206
Query: 350 MLVGYPPFYSDDPM------------STCRKIVNWRTHLK 377
M+ G PF D+ + S C+ ++ W L+
Sbjct: 207 MVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALR 246
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 63/262 (24%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ +L+ +G G FGEV + + V A+K LK M V+ E NL+ +
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMKTLQH 67
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF--------YVAETVL 227
+ +V+LY +E +Y+I EY+ G ++ D L DE + A+
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLL------DFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+ I + +YIHRD++ N+L+ + +++DFGL + I +N + +
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR------------VIEDNEYTARE 169
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
+ P + APE + + ++ D WS G ++
Sbjct: 170 GAKFPI----------------------------KWTAPEAINFGCFTIKSDVWSFGILL 201
Query: 348 YEML----VGYPPFYSDDPMST 365
YE++ + YP + D M+
Sbjct: 202 YEIVTYGKIPYPGRTNADVMTA 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 57/258 (22%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK------KSEMLRRGQVEHVRAE 166
M +E + IG GA+G V R+ +GH A+K ++ L V V
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 167 RNLLAEVDSNCIVKL--YC--SFQDDEF-LYLIMEYLPGGDMMTLLMRKDT--LTEDEAR 219
R L A N +V+L C S D E + L+ E++ D+ T L + L + +
Sbjct: 66 RRLEAFEHPN-VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 220 FYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIG 279
+ + + ++ +H + +HRD+KP+N+L+ G ++L+DFGL +
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR--------------- 168
Query: 280 NNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 339
+ +Q M V T Y APEVLL+ Y D
Sbjct: 169 -----------------------IYSYQ----MALTPVVVTLWYRAPEVLLQSTYATPVD 201
Query: 340 WWSLGAIMYEMLVGYPPF 357
WS+G I EM P F
Sbjct: 202 MWSVGCIFAEMFRRKPLF 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 106/267 (39%), Gaps = 48/267 (17%)
Query: 104 EYMRLQRHKMGADD--FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE 161
E + Q H + D+ + + +G+G F V + GH YA+K++ E R E
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR---E 71
Query: 162 HVRAERNLLAEVDSNCIVKL--YCSFQDD--EFLYLIMEYLPGGDMMTLLMR----KDTL 213
+ E ++ + I++L YC + +L++ + G + + R + L
Sbjct: 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL 131
Query: 214 TEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQE 273
TED+ + + +E+IH Y HRD+KP N+LL G L D G
Sbjct: 132 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG------------ 179
Query: 274 QDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG 333
S N Q LQ W R ++Y APE+ +
Sbjct: 180 ------------SMNQACIHVEGSRQALTLQDWAAQRCTISYR--------APELFSVQS 219
Query: 334 YGM---ECDWWSLGAIMYEMLVGYPPF 357
+ + D WSLG ++Y M+ G P+
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 190
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 191 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 222
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 223 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPXDRPTFE 270
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 271 EIQNHPWMQDV 281
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 61/252 (24%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
++G+GA V R K TG ++A+K LR V+ E +L +++ IVKL+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKLF 73
Query: 183 CSFQDDEFLY--LIMEYLPGGDMMTLLMRKDT---LTEDEARFYVAETVLAIESIHKHHY 237
++ + LIME+ P G + T+L L E E + + V + + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 238 IHRDIKPDNLLL----DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
+HR+IKP N++ D +L+DFG + L+ ++ F
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE----DDEQFV---------------- 173
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-----VLLK---KGYGMECDWWSLGA 345
S GT +Y+ P+ VL K K YG D WS+G
Sbjct: 174 ----------------------SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
Query: 346 IMYEMLVGYPPF 357
Y G PF
Sbjct: 212 TFYHAATGSLPF 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 60/257 (23%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA---ERNLLAEVDSNCIVK 180
+G GA+G V + A+KKL + + H R E LL + ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ----SLIHARRTYRELRLLKHLKHENVIG 83
Query: 181 LY------CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
L S +D +YL+ L G D+ + ++ L+++ +F V + + ++ IH
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNI-VKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
IHRD+KP N+ +++ LR+ DFGL +
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLAR------------------------------ 171
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVG 353
Q + M Y V T Y APE++L Y D WS+G IM E+L G
Sbjct: 172 ------------QADEEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
Query: 354 YPPFYSDDPMSTCRKIV 370
F D + ++I+
Sbjct: 218 KALFPGSDYIDQLKRIM 234
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 49/260 (18%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
D + +T +G+G +GEV + T A+K+++ E G E +LL E+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL-EHEEEGVPGTAIREVSLLKELQH 92
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I++L + L+LI EY D+ + + ++ + ++ + + + H
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 236 HYIHRDIKPDNLLL-----DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+HRD+KP NLLL + L++ DFGL + Q FT
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ---FT------------- 195
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
E + W Y PE+LL + Y D WS+ I E
Sbjct: 196 ---------HEIITLW----------------YRPPEILLGSRHYSTSVDIWSIACIWAE 230
Query: 350 MLVGYPPFYSDDPMSTCRKI 369
ML+ P F D + KI
Sbjct: 231 MLMKTPLFPGDSEIDQLFKI 250
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS- 175
+E+++ +G+G FG V C + G A+K +K E + E R E N+L +++
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK----EAARLEINVLEKINEK 90
Query: 176 -----NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTE--DEARFYVAETVLA 228
N V+++ F + + E L G L + L + R + A
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQA 149
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
++ +H + H D+KP+N+L D+ + NL +
Sbjct: 150 VKFLHDNKLTHTDLKPENILF----------------------VNSDYELTYNL--EKKR 185
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYST-VGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
+ER K T + +ST V T Y APEV+L+ G+ CD WS+G I+
Sbjct: 186 DERSV--KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCII 243
Query: 348 YEMLVGYPPFYSDD 361
+E VG+ F + D
Sbjct: 244 FEYYVGFTLFQTHD 257
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 175
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 176 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 207
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 208 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFE 255
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 256 EIQNHPWMQDV 266
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 189
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 190 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 221
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 222 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFE 269
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 270 EIQNHPWMQDV 280
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 203
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 204 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 235
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ +I+ + + ++S E + LI C + +
Sbjct: 236 MVCGDIPFEHDE------EIIGGQVFFR----QRVSXECQHLIR--WCLALRPSDRPTFE 283
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 284 EIQNHPWMQDV 294
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 102/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 84
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 141
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 182
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
+ V T Y APEV+L GY D WS+G IM E
Sbjct: 183 -----------------------MMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 219
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 220 MIKGGVLFPGTDHIDQWNKVI 240
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 190
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 191 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 222
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 223 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFE 270
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 271 EIQNHPWMQDV 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 217
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 218 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 249
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 250 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFE 297
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 298 EIQNHPWMQDV 308
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 95/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDS 175
++ L IG GA G V + A+KKL + + Q RA R L + V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKXVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQMLXGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 ML 351
M+
Sbjct: 218 MV 219
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 202
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 203 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 234
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ +I+ + + ++S E + LI C + +
Sbjct: 235 MVCGDIPFEHDE------EIIGGQVFFR----QRVSXECQHLIR--WCLALRPSDRPTFE 282
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 283 EIQNHPWMQDV 293
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 170
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 171 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 203 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFE 250
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 251 EIQNHPWMQDV 261
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 58 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 117
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 118 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 222
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 223 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 254
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 255 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFE 302
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 303 EIQNHPWMQDV 313
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 203
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 204 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 235
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ +I+ + + ++S E + LI C + +
Sbjct: 236 MVCGDIPFEHDE------EIIGGQVFFR----QRVSXECQHLIR--WCLALRPSDRPTFE 283
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 284 EIQNHPWMQDV 294
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 93 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 197
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 198 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 229
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 230 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFE 277
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 278 EIQNHPWMQDV 288
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G + + +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFMMTPE-- 185
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
V T Y APEV+L GY D WS+G IM E
Sbjct: 186 ----------------------------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 217
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 218 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 249
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 250 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFE 297
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 298 EIQNHPWMQDV 308
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 180
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 181 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 174
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 175 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 206
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 207 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFE 254
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 255 EIQNHPWMQDV 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 63/280 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 190
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 191 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 222
Query: 350 MLVGYPPFYSDDPM------------STCRKIVNWRTHLK 377
M+ G PF D+ + S C+ ++ W L+
Sbjct: 223 MVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALR 262
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 203
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 204 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 235
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ +I+ + + ++S E + LI C + +
Sbjct: 236 MVCGDIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFE 283
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 284 EIQNHPWMQDV 294
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 175
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 176 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 207
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 208 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFE 255
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 256 EIQNHPWMQDV 266
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 202
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 203 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 234
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ +I+ + + ++S E + LI C + +
Sbjct: 235 MVCGDIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFE 282
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 283 EIQNHPWMQDV 293
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 189
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 190 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 221
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 222 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFE 269
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 270 EIQNHPWMQDV 280
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ +L+ +G G FGEV + + V A+K LK M V+ E NL+ +
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMKTLQH 66
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF--------YVAETVL 227
+ +V+LY +E +Y+I E++ G ++ D L DE + A+
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLL------DFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I + +YIHRD++ N+L+ + +++DFGL + ++
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE 160
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 203
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 204 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 235
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ +I+ + + ++S E + LI C + +
Sbjct: 236 MVCGDIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFE 283
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 284 EIQNHPWMQDV 294
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 202
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 203 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 234
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 235 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFE 282
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 283 EIQNHPWMQDV 293
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 134/327 (40%), Gaps = 74/327 (22%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
+ ++ ADD E + +G+GA+G V R +G + A+K+++ + + + ++
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRAT--------VNSQEQKR 78
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMT---------------LLMRKDTL 213
LL ++D + + C F + L E GD+ ++ + T+
Sbjct: 79 LLXDLDIS-XRTVDCPFTVTFYGALFRE----GDVWICXELXDTSLDKFYKQVIDKGQTI 133
Query: 214 TEDEARFYVAETVLAIESIH-KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
ED V A+E +H K IHRD+KP N+L++ G ++ DFG+
Sbjct: 134 PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS--------- 184
Query: 273 EQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK 332
G ++ +++ + P P+ I PE L +K
Sbjct: 185 ------GYLVDDVAKDIDAGCKPYX----------------------APERINPE-LNQK 215
Query: 333 GYGMECDWWSLGAIMYEMLVGYPPFYS-DDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDL 391
GY ++ D WSLG E+ + P+ S P +++V + P + K S E D
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE-EPSPQLPAD-KFSAEFVDF 273
Query: 392 ISKLL-CNVNQRLGAKGADEIKVHPWF 417
S+ L N +R E+ HP+F
Sbjct: 274 TSQCLKKNSKER---PTYPELXQHPFF 297
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 104
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 105 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 165 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 209
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 210 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 241
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 242 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFE 289
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 290 EIQNHPWMQDV 300
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 95/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDS 175
++ L IG GA G V + A+KKL + + Q RA R L + V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKXVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 ML 351
M+
Sbjct: 218 MV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 110/275 (40%), Gaps = 63/275 (22%)
Query: 85 DVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVY 144
++S+ +N +E ++ + L+R ++ L IG GA G V +
Sbjct: 38 NMSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNV 90
Query: 145 AMKKLKKSEMLRRGQVEHVRAERNLLAE--VDSNCIVKLYCSFQD----DEF--LYLIME 196
A+KKL + + Q RA R L+ V+ I+ L F +EF +YL+ME
Sbjct: 91 AIKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 197 YLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLR 256
+ + M D + + + + + I+ +H IHRD+KP N+++ L+
Sbjct: 148 LMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
Query: 257 LSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYS 316
+ DFGL + T G + M Y
Sbjct: 205 ILDFGLAR------------TAGTSF----------------------------MMTPY- 223
Query: 317 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 224 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 175
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 176 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 207
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ R V +R ++S E + LI C + +
Sbjct: 208 MVCGDIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFE 255
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 256 EIQNHPWMQDV 266
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 202
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 203 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 234
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ +I+ + + ++S E + LI C + +
Sbjct: 235 MVCGDIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFE 282
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 283 EIQNHPWMQDV 293
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 83
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 140
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 219 MIKGGVLFPGTDHIDQWNKVI 239
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 180
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 181 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ G F D + K++
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVI 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 63/280 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 173
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 174 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 205
Query: 350 MLVGYPPFYSDDPM------------STCRKIVNWRTHLK 377
M+ G PF D+ + S C+ ++ W L+
Sbjct: 206 MVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALR 245
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 101/247 (40%), Gaps = 51/247 (20%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
++G+GA V R K TG ++A+K LR V+ E +L +++ IVKL+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKLF 73
Query: 183 CSFQDDEFLY--LIMEYLPGGDMMTLLMRKDT---LTEDEARFYVAETVLAIESIHKHHY 237
++ + LIME+ P G + T+L L E E + + V + + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 238 IHRDIKPDNLLL----DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
+HR+IKP N++ D +L+DFG + L+ ++ F L G+
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE----DDEQFV---XLYGT-------- 178
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLGAIMYEM 350
E+ H PD VL K K YG D WS+G Y
Sbjct: 179 -------EEYLH---------------PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216
Query: 351 LVGYPPF 357
G PF
Sbjct: 217 ATGSLPF 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQMLXGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR------------TAGTSF------- 180
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 181 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 ML 351
M+
Sbjct: 218 MV 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 132/336 (39%), Gaps = 96/336 (28%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY 182
+IG G+FG V + + V A+KK+ + + + +++ +R V +V L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEV-AIKKVLQDKRFKNRELQIMRI-------VKHPNVVDLK 98
Query: 183 CSF------QDDEFLYLIMEYLPGGDMMTLLMR-----KDTLTEDEARFYVAETVLAIES 231
F +D+ FL L++EY+P + + R K T+ + Y+ + + ++
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
IH HRDIKP NLLLD G L+L DFG K L I N
Sbjct: 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-----------IAGEPN------- 198
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 349
S + + Y APE++ Y D WS G +M E
Sbjct: 199 ------------------------VSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAE 234
Query: 350 MLVGYPPFYSDDPMSTCRKIV----------------NWRTHLKFPE----------EAK 383
++ G P F + + +I+ N+ H KFP+ +
Sbjct: 235 LMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH-KFPQIRPHPFSKVFRPR 293
Query: 384 LSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWFD 418
+A DLIS+LL + RL A E HP+FD
Sbjct: 294 TPPDAIDLISRLLEYTPSARLTAI---EALCHPFFD 326
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 110/275 (40%), Gaps = 63/275 (22%)
Query: 85 DVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVY 144
++S+ +N +E ++ + L+R ++ L IG GA G V +
Sbjct: 38 NMSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNV 90
Query: 145 AMKKLKKSEMLRRGQVEHVRAERNLLAE--VDSNCIVKLYCSFQD----DEF--LYLIME 196
A+KKL + + Q RA R L+ V+ I+ L F +EF +YL+ME
Sbjct: 91 AIKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 197 YLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLR 256
+ + M D + + + + + I+ +H IHRD+KP N+++ L+
Sbjct: 148 LMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
Query: 257 LSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYS 316
+ DFGL + T G + M Y
Sbjct: 205 ILDFGLAR------------TAGTSF----------------------------MMTPY- 223
Query: 317 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 224 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 55/258 (21%)
Query: 124 IGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIV 179
+G+G FG+V +CR TG A+K LK + ++ E +L + IV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 86
Query: 180 KL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVLAIESIHKHH 236
K C+ + LIME+LP G + L + K+ + + Y + ++ +
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
Y+HRD+ N+L++ +++ DFGL K ++ ++
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIE---------------------TDKEXXTV 185
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ ++ W APE L++ + + D WS G ++E+L
Sbjct: 186 KDDRDSPVFW-----------------YAPECLMQSKFYIASDVWSFGVTLHELLT---- 224
Query: 357 FYSD---DPMSTCRKIVN 371
Y D PM+ K++
Sbjct: 225 -YCDSDSSPMALFLKMIG 241
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 95/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL--LAEVDS 175
++ L IG GA G V + A+KKL + + Q RA R L + V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKXVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM------------------ 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 ML 351
M+
Sbjct: 218 MV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 95/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 75
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQMLXGI 132
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S +
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM------------------ 174
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 175 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 350 ML 351
M+
Sbjct: 211 MV 212
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 63/280 (22%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 170
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 171 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202
Query: 350 MLVGYPPFYSDDPM------------STCRKIVNWRTHLK 377
M+ G PF D+ + S C+ ++ W L+
Sbjct: 203 MVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALR 242
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 63/311 (20%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEH---VRAERNLLAEVD 174
+++ ++G G FG V + A+K ++K + G++ + V E LL +V
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 175 S--NCIVKLYCSFQDDEFLYLIMEYL-PGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
S + +++L F+ + LI+E P D+ + + L E+ AR + + + A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRDIK +N+L+D G L+L DFG L + + D
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------------- 170
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYE 349
GT Y PE + + +G WSLG ++Y+
Sbjct: 171 ----------------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202
Query: 350 MLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGAD 409
M+ G PF D+ +I+ + + ++S E + LI C + +
Sbjct: 203 MVCGDIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFE 250
Query: 410 EIKVHPWFDGV 420
EI+ HPW V
Sbjct: 251 EIQNHPWMQDV 261
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 81
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 138
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 139 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 179
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 180 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 216
Query: 350 ML 351
M+
Sbjct: 217 MV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 180
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 181 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 ML 351
M+
Sbjct: 218 MV 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 21 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 74
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 75 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 134 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 168
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 55/258 (21%)
Query: 124 IGKGAFGEVRVCR----EKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIV 179
+G+G FG+V +CR TG A+K LK + ++ E +L + IV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 74
Query: 180 KL--YCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAETVLAIESIHKHH 236
K C+ + LIME+LP G + L + K+ + + Y + ++ +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 237 YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPK 296
Y+HRD+ N+L++ +++ DFGL K ++ ++
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIE---------------------TDKEXXTV 173
Query: 297 RTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 356
+ ++ W APE L++ + + D WS G ++E+L
Sbjct: 174 KDDRDSPVFW-----------------YAPECLMQSKFYIASDVWSFGVTLHELLT---- 212
Query: 357 FYSD---DPMSTCRKIVN 371
Y D PM+ K++
Sbjct: 213 -YCDSDSSPMALFLKMIG 229
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 83
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 140
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 350 ML 351
M+
Sbjct: 219 MV 220
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 19 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 72
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 73 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
+ +YIHRD++ N+L+ +++DFGL +
Sbjct: 132 EERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 83
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 140
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 181
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 182 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 350 ML 351
M+
Sbjct: 219 MV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 180
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 181 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 ML 351
M+
Sbjct: 218 MV 219
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 23 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 76
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 77 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 136 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 170
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 101/261 (38%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S + E +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE-------------- 185
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
V T Y APEV+L GY D WS+G IM E
Sbjct: 186 ----------------------------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ F D + K++
Sbjct: 218 MVCHKILFPGRDYIDQWNKVI 238
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 101/261 (38%), Gaps = 56/261 (21%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 82
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 139
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + S + E +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE-------------- 185
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
V T Y APEV+L GY D WS+G IM E
Sbjct: 186 ----------------------------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 350 MLVGYPPFYSDDPMSTCRKIV 370
M+ F D + K++
Sbjct: 218 MVCHKILFPGRDYIDQWNKVI 238
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 22 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 75
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 76 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
+ +YIHRD++ N+L+ +++DFGL +
Sbjct: 135 EERNYIHRDLRAANILVSDTLSCKIADFGLAR 166
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 76
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 133
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 174
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 175 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 350 ML 351
M+
Sbjct: 212 MV 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 76
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 133
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 174
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 175 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 350 ML 351
M+
Sbjct: 212 MV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 75
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +YL+ME + + M D + + + + + I
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 132
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 173
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 174 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 350 ML 351
M+
Sbjct: 211 MV 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 112/283 (39%), Gaps = 87/283 (30%)
Query: 102 ETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE 161
ET+Y +R M DF+ + +IG G FG+V + + G Y ++RR +
Sbjct: 1 ETKYTVDKRFGM---DFKEIELIGSGGFGQVFKAKHRIDGKTY---------VIRRVKYN 48
Query: 162 HVRAERNL--LAEVDSNCIV------------------KLYCSFQDDE-----------F 190
+ +AER + LA++D IV L S D E
Sbjct: 49 NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKC 108
Query: 191 LYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLL 248
L++ ME+ G + + R + L + A + ++ IH IHRD+KP N+
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 249 LDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQK 308
L +++ DFGL L +N+ KRT+ +
Sbjct: 169 LVDTKQVKIGDFGLVTSL--------------------KND-----GKRTRSK------- 196
Query: 309 NRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
GT Y++PE + + YG E D ++LG I+ E+L
Sbjct: 197 ----------GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 19 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 72
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 73 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 132 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 13 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 66
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 67 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 18 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 71
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 72 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 131 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 165
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 96/236 (40%), Gaps = 51/236 (21%)
Query: 124 IGKGAFGEVRV-CREKT---TGHVYAMKKLKKS--EMLRRGQVEHVRAERNLLAEVDSNC 177
+G+G FG+V + C + T TG + A+K LK+ LR G + R L E
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEH---- 72
Query: 178 IVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
IVK C Q ++ + L+MEY+P G + L R + + + + + +H
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
HYIHR + N+LLD +++ DFGL K + G+ ++ + P
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAV----------PEGHEYYRVREDGDSPVF- 180
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ APE L + + D WS G +YE+L
Sbjct: 181 ---------------------------WYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 96/236 (40%), Gaps = 51/236 (21%)
Query: 124 IGKGAFGEVRV-CREKT---TGHVYAMKKLKKS--EMLRRGQVEHVRAERNLLAEVDSNC 177
+G+G FG+V + C + T TG + A+K LK+ LR G + R L E
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEH---- 71
Query: 178 IVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
IVK C Q ++ + L+MEY+P G + L R + + + + + +H
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
HYIHR + N+LLD +++ DFGL K + G+ ++ + P
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAV----------PEGHEYYRVREDGDSPVF- 179
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ APE L + + D WS G +YE+L
Sbjct: 180 ---------------------------WYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
Query: 105 YMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR 164
+ + + +M D + +G G +GEV V K A+K LK+ M +VE
Sbjct: 21 FQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFL 76
Query: 165 AERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYV 222
E ++ E+ +V+L + Y++ EY+P G+++ L ++ +T +
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMA 136
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+ A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT 184
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 14 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 67
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 68 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 126
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 127 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 161
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 15 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 68
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 69 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 127
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 128 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 162
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 51/236 (21%)
Query: 124 IGKGAFGEVRV-CREKT---TGHVYAMKKLKK--SEMLRRGQVEHVRAERNLLAEVDSNC 177
+G+G FG+V + C + T TG + A+K LK R G + + R L E
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEH---- 77
Query: 178 IVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I+K C Q ++ L L+MEY+P G + L R ++ + + + + +H
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
HYIHR++ N+LLD +++ DFGL K + G+ ++ + P
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV----------PEGHEYYRVREDGDSPVF- 185
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ APE L + + D WS G +YE+L
Sbjct: 186 ---------------------------WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 13 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 66
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 67 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 13 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 66
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 67 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 51/236 (21%)
Query: 124 IGKGAFGEVRV-CREKT---TGHVYAMKKLKK--SEMLRRGQVEHVRAERNLLAEVDSNC 177
+G+G FG+V + C + T TG + A+K LK R G + + R L E
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEH---- 77
Query: 178 IVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I+K C Q ++ L L+MEY+P G + L R ++ + + + + +H
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
HYIHR++ N+LLD +++ DFGL K + G+ ++ + P
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV----------PEGHEYYRVREDGDSPVF- 185
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ APE L + + D WS G +YE+L
Sbjct: 186 ---------------------------WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEVDSNCIVKLY 182
+G+G FG V + A+KKL + ++ + E ++A+ +V+L
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED--EARFYVAETVL-AIESIHKHHYIH 239
D + L L+ Y+P G ++ L D R +A+ I +H++H+IH
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 240 RDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
RDIK N+LLD+ ++SDFGL + A+ K Q
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLAR----------------------------ASEKFAQ 188
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
++ VGT Y+APE L+ + D +S G ++ E++ G P
Sbjct: 189 T-----------VMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 8 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 61
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 62 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 121 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 155
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEVDSNCIVKLY 182
+G+G FG V + A+KKL + ++ + E ++A+ +V+L
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED--EARFYVAETVL-AIESIHKHHYIH 239
D + L L+ Y+P G ++ L D R +A+ I +H++H+IH
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 240 RDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
RDIK N+LLD+ ++SDFGL + A+ K Q
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLAR----------------------------ASEKFAQ 188
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
++ VGT Y+APE L+ + D +S G ++ E++ G P
Sbjct: 189 T-----------VMXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 98/253 (38%), Gaps = 67/253 (26%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
DF+ + +IG G FG+V + + G Y +K++K + E E LA++D
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHV 64
Query: 177 CIVKLYCSFQDDEF----------------LYLIMEYLPGGDMMTLL--MRKDTLTEDEA 218
IV + ++ L++ ME+ G + + R + L + A
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 219 RFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTI 278
+ ++ IH I+RD+KP N+ L +++ DFGL L
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL------------ 172
Query: 279 GNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 338
+N+ + K GT Y++PE + + YG E
Sbjct: 173 --------KNDGKRXRSK----------------------GTLRYMSPEQISSQDYGKEV 202
Query: 339 DWWSLGAIMYEML 351
D ++LG I+ E+L
Sbjct: 203 DLYALGLILAELL 215
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEVDSNCIVKLY 182
+G+G FG V + A+KKL + ++ + E ++A+ +V+L
Sbjct: 33 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 183 CSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED--EARFYVAETVL-AIESIHKHHYIH 239
D + L L+ Y+P G ++ L D R +A+ I +H++H+IH
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 150
Query: 240 RDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQ 299
RDIK N+LLD+ ++SDFGL + A+ K Q
Sbjct: 151 RDIKSANILLDEAFTAKISDFGLAR----------------------------ASEKFAQ 182
Query: 300 QEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
++ VGT Y+APE L+ + D +S G ++ E++ G P
Sbjct: 183 X-----------VMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 87
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 144
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 185
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 186 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 222
Query: 350 ML 351
M+
Sbjct: 223 MV 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE--VDS 175
++ L IG GA G V + A+KKL + + Q RA R L+ V+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 76
Query: 176 NCIVKLYCSFQD----DEF--LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAI 229
I+ L F +EF +Y++ME + + M D + + + + + I
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 133
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
+ +H IHRD+KP N+++ L++ DFGL + T G +
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSF------- 174
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 175 ---------------------MMTPY--VVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 211
Query: 350 ML 351
M+
Sbjct: 212 MV 213
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 125/307 (40%), Gaps = 76/307 (24%)
Query: 166 ERNLLAEVDSNC-IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED-------E 217
E LL E D + +++ YCS D FLY+ +E L ++ L+ K+ E+
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 218 ARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYG-------------HLRLSDFGLCK 264
+ + + +H IHRD+KP N+L+ + +SDFGLCK
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 265 PLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYI 324
LD + NLN S GT +
Sbjct: 195 KLDSGQXXFR-----XNLNNPS--------------------------------GTSGWR 217
Query: 325 APEVL---LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDDPMSTCRKIVNWRTHLK 377
APE+L K+ D +S+G + Y +L G PF YS + + R I + +K
Sbjct: 218 APELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFSL-DEMK 275
Query: 378 FPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVN 437
+ L EA DLIS+++ + L A ++ HP F W + ++E F+ +V+
Sbjct: 276 CLHDRSLIAEATDLISQMID--HDPLKRPTAMKVLRHPLF----WPKSKKLE--FLLKVS 327
Query: 438 DELDTQN 444
D L+ +N
Sbjct: 328 DRLEIEN 334
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 125/307 (40%), Gaps = 76/307 (24%)
Query: 166 ERNLLAEVDSNC-IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED-------E 217
E LL E D + +++ YCS D FLY+ +E L ++ L+ K+ E+
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 218 ARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYG-------------HLRLSDFGLCK 264
+ + + +H IHRD+KP N+L+ + +SDFGLCK
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 265 PLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYI 324
LD + NLN S GT +
Sbjct: 195 KLDSGQXXFR-----XNLNNPS--------------------------------GTSGWR 217
Query: 325 APEVL---LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDDPMSTCRKIVNWRTHLK 377
APE+L K+ D +S+G + Y +L G PF YS + + R I + +K
Sbjct: 218 APELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFSL-DEMK 275
Query: 378 FPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVN 437
+ L EA DLIS+++ + L A ++ HP F W + ++E F+ +V+
Sbjct: 276 CLHDRSLIAEATDLISQMID--HDPLKRPTAMKVLRHPLF----WPKSKKLE--FLLKVS 327
Query: 438 DELDTQN 444
D L+ +N
Sbjct: 328 DRLEIEN 334
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 53/249 (21%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+D L IG+G FGEV R + + A+K + E L E +L +
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSH 171
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL------MRKDTLTEDEARFYVAETVLAI 229
IV+L + +Y++ME + GGD +T L +R TL + V + +
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ-----MVGDAAAGM 226
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
E + IHRD+ N L+ + L++SDFG+ + +E D
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR-------EEADGVX----------- 268
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
AA +Q ++ + APE L Y E D WS G +++E
Sbjct: 269 ---AASGGLRQVPVK------------------WTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 350 ML-VGYPPF 357
+G P+
Sbjct: 308 TFSLGASPY 316
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGH---VYAMKKLKKSEMLRRGQV-EHVRAERNLLA 171
DD++L+ +G+G + EV T V +K +KK+++ R ++ E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 53/249 (21%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+D L IG+G FGEV R + + A+K + E L E +L +
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSH 171
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL------MRKDTLTEDEARFYVAETVLAI 229
IV+L + +Y++ME + GGD +T L +R TL + V + +
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ-----MVGDAAAGM 226
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNN 289
E + IHRD+ N L+ + L++SDFG+ + +E D
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR-------EEADGVY----------- 268
Query: 290 ERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
AA +Q ++ + APE L Y E D WS G +++E
Sbjct: 269 ---AASGGLRQVPVK------------------WTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 350 ML-VGYPPF 357
+G P+
Sbjct: 308 TFSLGASPY 316
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 57/265 (21%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK-KSEMLRRGQVEHVRAERNLLAEVD 174
D +E+ ++IGKG+FG+V ++ A+K +K K L + Q+E E L+ + D
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHD 92
Query: 175 SNC---IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAE--TVL 227
+ IV L F L L+ E L ++ LL + ++ + R + + T L
Sbjct: 93 TEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 228 AIESIHKHHYIHRDIKPDNLLL--DKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
+ + IH D+KP+N+LL K +++ DFG S
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG----------------------SS 189
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 345
Q +R Y + + Y +PEVLL Y + D WSLG
Sbjct: 190 CQLGQR----------------------IYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGC 227
Query: 346 IMYEMLVGYPPFYSDDPMSTCRKIV 370
I+ EM G P F + + KIV
Sbjct: 228 ILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRR--------------GQVE 161
+D+ ++ + +G F ++ +C + YA+KK +KS + ++ + +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88
Query: 162 HVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFY 221
+ E ++ ++ + + + + +Y+I EY+ ++ L ++ F
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 222 -------VAETVL-AIESIHKHHYI-HRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
+ ++VL + IH I HRD+KP N+L+DK G ++LSDFG
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG----------- 197
Query: 273 EQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK 332
E ++ + + GS GT +++ PE +
Sbjct: 198 ESEYMVDKKIKGSR--------------------------------GTYEFMPPEFFSNE 225
Query: 333 GY--GMECDWWSLGAIMYEMLVGYPPF 357
G + D WSLG +Y M PF
Sbjct: 226 SSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 49/261 (18%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M L + +M D + +G G FGEV K A+K LK+ M +VE
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK 56
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVA 223
E ++ E+ +V+L + Y+I E++ G+++ L + ++ +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 224 ETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
+ A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT----------- 165
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTP-DYIAPEVLLKKGYGMECDWWS 342
A++ P + APE L + ++ D W+
Sbjct: 166 ------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 343 LGAIMYEMLV-GYPPFYSDDP 362
G +++E+ G P+ DP
Sbjct: 196 FGVLLWEIATYGMSPYPGIDP 216
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 51/236 (21%)
Query: 124 IGKGAFGEVRV-CREKT---TGHVYAMKKLKK--SEMLRRGQVEHVRAERNLLAEVDSNC 177
+G+G FG+V + C + T TG + A+K LK R G + + R L E
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEH---- 94
Query: 178 IVKL--YCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKH 235
I+K C L L+MEY+P G + L R ++ + + + + +H
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 236 HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAP 295
HYIHRD+ N+LLD +++ DFGL K + G+ ++ + P
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV----------PEGHEXYRVREDGDSPVF- 202
Query: 296 KRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ APE L + + D WS G +YE+L
Sbjct: 203 ---------------------------WYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G FGEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 9 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 62
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 63 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHR+++ N+L+ +++DFGL + ++
Sbjct: 122 EERNYIHRNLRAANILVSDTLSCKIADFGLARLIE 156
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G G FGEV + V A+K +K M VE AE N++ + + +VKL+
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLH- 76
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF--YVAETVLAIESIHKHHYIHRD 241
+ E +Y+I E++ G ++ L + + + + A+ + I + +YIHRD
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 136
Query: 242 IKPDNLLLDKYGHLRLSDFGLCKPLD 267
++ N+L+ +++DFGL + ++
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIE 162
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 105/272 (38%), Gaps = 71/272 (26%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK-KSEMLRRGQVEHVRAERNLLAEVD 174
D +E+ ++IGKG+FG+V ++ A+K +K K L + Q+E E L+ + D
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHD 111
Query: 175 SNC---IVKLYCSFQDDEFLYLIMEYLPGGDMMTL-----------LMRKDTLTEDEARF 220
+ IV L F L L+ E L L L RK A
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLL--DKYGHLRLSDFGLCKPLDCSTLQEQDFTI 278
++A L+I IH D+KP+N+LL K +++ DFG
Sbjct: 172 FLATPELSI--------IHCDLKPENILLCNPKRSAIKIVDFG----------------- 206
Query: 279 GNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 338
S Q +R Y + + Y +PEVLL Y +
Sbjct: 207 -----SSCQLGQR----------------------IYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 339 DWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIV 370
D WSLG I+ EM G P F + + KIV
Sbjct: 240 DMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G G FGEV + V A+K +K M VE AE N++ + + +VKL+
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLH- 249
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF--YVAETVLAIESIHKHHYIHRD 241
+ E +Y+I E++ G ++ L + + + + A+ + I + +YIHRD
Sbjct: 250 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 309
Query: 242 IKPDNLLLDKYGHLRLSDFGLCKPLD 267
++ N+L+ +++DFGL + ++
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIE 335
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 63/279 (22%)
Query: 117 DFELLTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQ-VEHVRAERNLLAE 172
DF LT+ IG G FG +V R G A+K + Q +E+VR E L A
Sbjct: 5 DFAELTLEEIIGIGGFG--KVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK----DTLTEDEARFYVAETVLA 228
+ I+ L + L L+ME+ GG + +L K D L + L
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH 122
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGH--------LRLSDFGLCKPLDCSTLQEQDFTIGN 280
E+I IHRD+K N+L+ + L+++DFGL +
Sbjct: 123 DEAIVP--IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---------------- 164
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
W + +M S G ++APEV+ + D
Sbjct: 165 ------------------------EWHRTTKM---SAAGAYAWMAPEVIRASMFSKGSDV 197
Query: 341 WSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFP 379
WS G +++E+L G PF D ++ + + L P
Sbjct: 198 WSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 106/261 (40%), Gaps = 49/261 (18%)
Query: 106 MRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
M L + +M D + +G G +GEV K A+K LK+ M +VE
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK 56
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVA 223
E ++ E+ +V+L + Y+I E++ G+++ L + ++ +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 224 ETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLN 283
+ A+E + K ++IHRD+ N L+ + ++++DFGL + + T FT
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----FT------ 165
Query: 284 GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTP-DYIAPEVLLKKGYGMECDWWS 342
A++ P + APE L + ++ D W+
Sbjct: 166 ------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 343 LGAIMYEMLV-GYPPFYSDDP 362
G +++E+ G P+ DP
Sbjct: 196 FGVLLWEIATYGMSPYPGIDP 216
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
+G G FGEV + V A+K +K M VE AE N++ + + +VKL+
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLH- 243
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF--YVAETVLAIESIHKHHYIHRD 241
+ E +Y+I E++ G ++ L + + + + A+ + I + +YIHRD
Sbjct: 244 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 303
Query: 242 IKPDNLLLDKYGHLRLSDFGLCK 264
++ N+L+ +++DFGL +
Sbjct: 304 LRAANILVSASLVCKIADFGLAR 326
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 105/272 (38%), Gaps = 71/272 (26%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK-KSEMLRRGQVEHVRAERNLLAEVD 174
D +E+ ++IGKG+FG+V ++ A+K +K K L + Q+E E L+ + D
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHD 111
Query: 175 SNC---IVKLYCSFQDDEFLYLIMEYLPGGDMMTL-----------LMRKDTLTEDEARF 220
+ IV L F L L+ E L L L RK A
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLL--DKYGHLRLSDFGLCKPLDCSTLQEQDFTI 278
++A L+I IH D+KP+N+LL K +++ DFG
Sbjct: 172 FLATPELSI--------IHCDLKPENILLCNPKRXAIKIVDFG----------------- 206
Query: 279 GNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 338
S Q +R Y + + Y +PEVLL Y +
Sbjct: 207 -----SSCQLGQR----------------------IYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 339 DWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIV 370
D WSLG I+ EM G P F + + KIV
Sbjct: 240 DMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
+ +L+ +G G GEV + GH A+K LK+ M + AE NL+ ++
Sbjct: 13 ETLKLVERLGAGQAGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 66
Query: 175 SNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAIESI 232
+V+LY + E +Y+I EY+ G ++ L LT ++ A+ + I
Sbjct: 67 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 233 HKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ +YIHRD++ N+L+ +++DFGL + ++
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 334 YGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTC----RKIVNWRTHLKFPEEAKLSIEAK 389
Y CD WSLG IMY +L GYPPFYS+ ++ +I + PE +++S E K
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 234
Query: 390 DLISKLL-CNVNQRLGAKGADEIKVHPWF 417
LI LL QR+ E HPW
Sbjct: 235 MLIRNLLKTEPTQRM---TITEFMNHPWI 260
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 116 DDFELLT-MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVD 174
DD+++ + ++G G G+V K T +A+K L+ RR H RA
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 67
Query: 175 SNC-----IVKLYCS-FQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETV 226
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKY---GHLRLSDFGLCK 264
AI+ +H + HRD+KP+NLL L+L+DFG K
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 80/311 (25%)
Query: 166 ERNLLAEVDSNC-IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED-------E 217
E LL E D + +++ YCS D FLY+ +E L ++ L+ K+ E+
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 218 ARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYG-------------HLRLSDFGLCK 264
+ + + +H IHRD+KP N+L+ + +SDFGLCK
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 265 PLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYI 324
LD + NLN S GT +
Sbjct: 177 KLDSG-----QSSFRTNLNNPS--------------------------------GTSGWR 199
Query: 325 APEVL-------LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDDPMSTCRKIVNWR 373
APE+L K+ D +S+G + Y +L G PF YS + + R I +
Sbjct: 200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFSL- 257
Query: 374 THLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFI 433
+K + L EA DLIS+++ + L A ++ HP F W + ++E F+
Sbjct: 258 DEMKCLHDRSLIAEATDLISQMID--HDPLKRPTAMKVLRHPLF----WPKSKKLE--FL 309
Query: 434 PEVNDELDTQN 444
+V+D L+ +N
Sbjct: 310 LKVSDRLEIEN 320
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 53/249 (21%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVE-HVRAERNLLAEVDSNCIVKL 181
++G+G++G+V+ + T A+K LKK ++ R E +V+ E LL + +++L
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 182 YCSFQDDEF--LYLIMEYLPGGDMMTLLMRKDTLTED-----EARFYVAETVLAIESIHK 234
++E +Y++MEY G M +L D++ E +A Y + + +E +H
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCG-MQEML---DSVPEKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
+H+DIKP NLLL G L++S G+ + L F +
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL-------HPFAADDTC------------ 168
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL--LKKGYGMECDWWSLGAIMYEMLV 352
RT Q G+P + PE+ L G + D WS G +Y +
Sbjct: 169 --RTSQ------------------GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT 208
Query: 353 GYPPFYSDD 361
G PF D+
Sbjct: 209 GLYPFEGDN 217
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 45/248 (18%)
Query: 118 FELLTMIGKGA--FGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ELLT+IGKG V + R K TG ++++ E V ++ E ++ +
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL-EACSNEMVTFLQGELHVSKLFNH 69
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETVLAIESIH 233
IV +F D L+++ ++ G L+ D + E + + + A++ IH
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
Y+HR +K ++L+ G + LS
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLSGL--------------------------------- 156
Query: 294 APKRTQQEQLQHWQKNRRMLAYS--TVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYE 349
R+ + H Q+ R + + +V +++PEVL + +GY + D +S+G E
Sbjct: 157 ---RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 213
Query: 350 MLVGYPPF 357
+ G+ PF
Sbjct: 214 LANGHVPF 221
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 45/248 (18%)
Query: 118 FELLTMIGKGA--FGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ELLT+IGKG V + R K TG ++++ E V ++ E ++ +
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL-EACSNEMVTFLQGELHVSKLFNH 85
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETVLAIESIH 233
IV +F D L+++ ++ G L+ D + E + + + A++ IH
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
Y+HR +K ++L+ G + LS
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGL--------------------------------- 172
Query: 294 APKRTQQEQLQHWQKNRRMLAYS--TVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYE 349
R+ + H Q+ R + + +V +++PEVL + +GY + D +S+G E
Sbjct: 173 ---RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 229
Query: 350 MLVGYPPF 357
+ G+ PF
Sbjct: 230 LANGHVPF 237
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 80/311 (25%)
Query: 166 ERNLLAEVDSNC-IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED-------E 217
E LL E D + +++ YCS D FLY+ +E L ++ L+ K+ E+
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 218 ARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYG-------------HLRLSDFGLCK 264
+ + + +H IHRD+KP N+L+ + +SDFGLCK
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 265 PLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYI 324
LD + NLN S GT +
Sbjct: 177 KLDSGQXXFR-----XNLNNPS--------------------------------GTSGWR 199
Query: 325 APEVL-------LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDDPMSTCRKIVNWR 373
APE+L K+ D +S+G + Y +L G PF YS + + R I +
Sbjct: 200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFSL- 257
Query: 374 THLKFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFI 433
+K + L EA DLIS+++ + L A ++ HP F W + ++E F+
Sbjct: 258 DEMKCLHDRSLIAEATDLISQMID--HDPLKRPTAMKVLRHPLF----WPKSKKLE--FL 309
Query: 434 PEVNDELDTQN 444
+V+D L+ +N
Sbjct: 310 LKVSDRLEIEN 320
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 46/235 (19%)
Query: 125 GKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQV-EHVRAERNLLAEVDSNCIVKLYC 183
G+G FG V + A+KKL + ++ + E + A+ +V+L
Sbjct: 31 GEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED--EARFYVAETVL-AIESIHKHHYIHR 240
D + L L+ Y P G ++ L D R +A+ I +H++H+IHR
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 241 DIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQ 300
DIK N+LLD+ ++SDFGL R +
Sbjct: 149 DIKSANILLDEAFTAKISDFGLA---------------------------------RASE 175
Query: 301 EQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 355
+ Q +R VGT Y APE L+ + D +S G ++ E++ G P
Sbjct: 176 KFAQXVXXSR------IVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 108 LQRHKMGADDFELLTMIGKGAFGEVR--VCREKTTGHVYAMKKLKKS-------EMLRRG 158
L+R + D EL G G FG VR V R + A+K LK+ EM+R
Sbjct: 6 LKRDNLLIADIEL----GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 159 QVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDE 217
Q+ H ++D+ IV+L Q E L L+ME GG + L+ +++ +
Sbjct: 62 QIMH---------QLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSN 111
Query: 218 ARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + + ++ + + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 112 VAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 114/284 (40%), Gaps = 63/284 (22%)
Query: 145 AMKKLKKSEMLRRGQVEH---VRAERNLLAEVDS--NCIVKLYCSFQDDEFLYLIMEYL- 198
A+K ++K + G++ + V E LL +V S + +++L F+ + LI+E
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 199 PGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-KYGHLRL 257
P D+ + + L E+ AR + + + A+ H +HRDIK +N+L+D G L+L
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199
Query: 258 SDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYST 317
DFG L + + D
Sbjct: 200 IDFGSGALLKDTVYTDFD------------------------------------------ 217
Query: 318 VGTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHL 376
GT Y PE + + +G WSLG ++Y+M+ G PF D+ R V +R
Sbjct: 218 -GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIRGQVFFRQ-- 272
Query: 377 KFPEEAKLSIEAKDLISKLLCNVNQRLGAKGADEIKVHPWFDGV 420
++S E + LI C + +EI+ HPW V
Sbjct: 273 ------RVSSECQHLIR--WCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 104/259 (40%), Gaps = 49/259 (18%)
Query: 108 LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
L + +M D + +G G +GEV K A+K LK+ M +VE E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEA 58
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAET 225
++ E+ +V+L + Y+I+E++ G+++ L + ++ + +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT------------- 165
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTP-DYIAPEVLLKKGYGMECDWWSLG 344
A++ P + APE L + ++ D W+ G
Sbjct: 166 ----------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 345 AIMYEMLV-GYPPFYSDDP 362
+++E+ G P+ DP
Sbjct: 198 VLLWEIATYGMSPYPGIDP 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 64/252 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ +L+ +G G FGEV + V A+K LK M E E ++ ++
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPGTM----SPESFLEEAQIMKKLKH 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFY--------VAETVL 227
+ +V+LY + +E +Y++ EY+ G ++ D L + E R A+
Sbjct: 64 DKLVQLY-AVVSEEPIYIVTEYMNKGSLL------DFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
+ I + +YIHRD++ N+L+ +++DFGL + I +N + Q
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR------------LIEDNEXTARQ 164
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 347
+ P + APE L + ++ D WS G ++
Sbjct: 165 GAKFPI----------------------------KWTAPEAALYGRFTIKSDVWSFGILL 196
Query: 348 YEML----VGYP 355
E++ V YP
Sbjct: 197 TELVTKGRVPYP 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 49/244 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D L +G G FG V+ + + V A+K +K+ M +E + NL E
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 65
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAIESIHK 234
+V+LY +++I EY+ G ++ L MR T+ + A+E +
Sbjct: 66 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 123
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
++HRD+ N L++ G +++SDFGL + + + ++T SS+ ++ P
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYT-------SSRGSKFPV- 170
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VG 353
W PEVL+ + + D W+ G +M+E+ +G
Sbjct: 171 ----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 203
Query: 354 YPPF 357
P+
Sbjct: 204 KMPY 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 51/245 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D L +G G FG V+ + + V A+K +K+ M +E + NL E
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 80
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAIESIHK 234
+V+LY +++I EY+ G ++ L MR T+ + A+E +
Sbjct: 81 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 138
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCK-PLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
++HRD+ N L++ G +++SDFGL + LD E+ ++G+
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEETSSVGSKF----------- 183
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-V 352
P R + PEVL+ + + D W+ G +M+E+ +
Sbjct: 184 -PVR-------------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
Query: 353 GYPPF 357
G P+
Sbjct: 218 GKMPY 222
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV--- 173
+F L IG G FG V C ++ G +YA+K+ KK G V+ A R + A
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVDEQNALREVYAHAVLG 64
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK----DTLTEDEARFYVAETVLAI 229
+ +V+ + ++ +D+ + + EY GG + + E E + + + +
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 230 ESIHKHHYIHRDIKPDNLLLDK 251
IH +H DIKP N+ + +
Sbjct: 125 RYIHSMSLVHMDIKPSNIFISR 146
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 49/258 (18%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D + IG G+FG V R + G A+K L + + E +R E ++ +
Sbjct: 38 DLNIKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFLR-EVAIMKRLRHP 94
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR---KDTLTEDEARFYVAETVLAIESIH 233
IV + L ++ EYL G + LL + ++ L E + + +H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 234 KHH--YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ +HR++K NLL+DK +++ DFGL + L ST
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKASTF-------------------- 193
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ + S GTP+++APEVL + + D +S G I++E+
Sbjct: 194 --------------------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233
Query: 352 VGYPPFYSDDPMSTCRKI 369
P+ + +P +
Sbjct: 234 TLQQPWGNLNPAQVVAAV 251
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV--- 173
+F L IG G FG V C ++ G +YA+K+ KK G V+ A R + A
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVDEQNALREVYAHAVLG 66
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK----DTLTEDEARFYVAETVLAI 229
+ +V+ + ++ +D+ + + EY GG + + E E + + + +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 230 ESIHKHHYIHRDIKPDNLLLDK 251
IH +H DIKP N+ + +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISR 148
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV--- 173
+F L IG G FG V C ++ G +YA+K+ KK G V+ A R + A
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVDEQNALREVYAHAVLG 68
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK----DTLTEDEARFYVAETVLAI 229
+ +V+ + ++ +D+ + + EY GG + + E E + + + +
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 230 ESIHKHHYIHRDIKPDNLLLDK 251
IH +H DIKP N+ + +
Sbjct: 129 RYIHSMSLVHMDIKPSNIFISR 150
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 48/236 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D L +G G FG V+ + + V A+K +K+ M +E + NL E
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 80
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAIESIHK 234
+V+LY +++I EY+ G ++ L MR T+ + A+E +
Sbjct: 81 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 138
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
++HRD+ N L++ G +++SDFGL + + + ++T SS ++ P
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYT-------SSVGSKFPV- 185
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
W PEVL+ + + D W+ G +M+E+
Sbjct: 186 ----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV--- 173
+F L IG G FG V C ++ G +YA+K+ KK G V+ A R + A
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVDEQNALREVYAHAVLG 66
Query: 174 DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK----DTLTEDEARFYVAETVLAI 229
+ +V+ + ++ +D+ + + EY GG + + E E + + + +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 230 ESIHKHHYIHRDIKPDNLLLDK 251
IH +H DIKP N+ + +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISR 148
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 130/343 (37%), Gaps = 96/343 (27%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIK 97
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+D+ VK S + L+ EY+ D L LT+ + RFY+ E + A++
Sbjct: 98 LIDT---VKDPVS----KTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDY 147
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRD+KP N+++D + LRL D+GL + + Q++ +
Sbjct: 148 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPA----QEYNV------------ 191
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYE 349
V + + PE+L+ + Y D WSLG ++
Sbjct: 192 --------------------------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 225
Query: 350 MLVGYPPFYSD----DPMSTCRKIVN------------------------------WRTH 375
M+ PF+ D + K++ W
Sbjct: 226 MIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENF 285
Query: 376 LKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWF 417
+ +S EA DL+ KLL + QRL AK A E HP+F
Sbjct: 286 IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME---HPYF 325
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 49/258 (18%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D + IG G+FG V R + G A+K L + + E +R E ++ +
Sbjct: 38 DLNIKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFLR-EVAIMKRLRHP 94
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR---KDTLTEDEARFYVAETVLAIESIH 233
IV + L ++ EYL G + LL + ++ L E + + +H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 234 KHH--YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+ +HRD+K NLL+DK +++ DFGL S L+ F
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL------SRLKASXF--------------- 193
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
+ + GTP+++APEVL + + D +S G I++E+
Sbjct: 194 --------------------LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233
Query: 352 VGYPPFYSDDPMSTCRKI 369
P+ + +P +
Sbjct: 234 TLQQPWGNLNPAQVVAAV 251
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 321
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 322 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASG 375
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
+ + + +Y+HRD++ N+L+ + +++DFGL +
Sbjct: 376 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 411
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 33/254 (12%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
F ++ +G G FG V +C+ YA+K ++ + R + E ++L ++ ++
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRS----AKIEADILKKIQNDD 92
Query: 178 I-----VKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDT--LTEDEARFYVAETVLAIE 230
I VK + F + + LI E L G + ++ R + ++ + Y E + A+
Sbjct: 93 INNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALN 151
Query: 231 SIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
+ K H D+KP+N+LLD ++ T+ +G
Sbjct: 152 YLRKMSLTHTDLKPENILLDD-----------------PYFEKSLITVRRVTDGKKIQIY 194
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAY-STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 349
R K T + + + + S + T Y APEV+L G+ + D WS G ++ E
Sbjct: 195 R---TKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251
Query: 350 MLVGYPPFYSDDPM 363
+ G F + + M
Sbjct: 252 LYTGSLLFRTHEHM 265
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 49/244 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D L +G G FG V+ + + V A+K +K+ M +E + NL E
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 64
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAIESIHK 234
+V+LY +++I EY+ G ++ L MR T+ + A+E +
Sbjct: 65 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 122
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
++HRD+ N L++ G +++SDFGL + + + ++T SS ++ P
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYT-------SSVGSKFPV- 169
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VG 353
W PEVL+ + + D W+ G +M+E+ +G
Sbjct: 170 ----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 202
Query: 354 YPPF 357
P+
Sbjct: 203 KMPY 206
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 130/343 (37%), Gaps = 96/343 (27%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIK 102
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+D+ VK S + L+ EY+ D L LT+ + RFY+ E + A++
Sbjct: 103 LIDT---VKDPVS----KTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDY 152
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
H +HRD+KP N+++D + LRL D+GL + + Q++ +
Sbjct: 153 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPA----QEYNV------------ 196
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYE 349
V + + PE+L+ + Y D WSLG ++
Sbjct: 197 --------------------------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 230
Query: 350 MLVGYPPFYSD----DPMSTCRKIVN------------------------------WRTH 375
M+ PF+ D + K++ W
Sbjct: 231 MIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENF 290
Query: 376 LKFPEEAKLSIEAKDLISKLL-CNVNQRLGAKGADEIKVHPWF 417
+ +S EA DL+ KLL + QRL AK A E HP+F
Sbjct: 291 IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME---HPYF 330
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 72
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++MEY+ G ++ L +R L + A+
Sbjct: 73 EKLVQLY-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 126
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 49/244 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D L +G G FG V+ + + V A+K +K+ M +E + NL E
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 71
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAIESIHK 234
+V+LY +++I EY+ G ++ L MR T+ + A+E +
Sbjct: 72 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 129
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
++HRD+ N L++ G +++SDFGL + + + ++T SS ++ P
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYT-------SSVGSKFPV- 176
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VG 353
W PEVL+ + + D W+ G +M+E+ +G
Sbjct: 177 ----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 209
Query: 354 YPPF 357
P+
Sbjct: 210 KMPY 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 49/244 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D L +G G FG V+ + + V A+K +K+ M +E + NL E
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 65
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAIESIHK 234
+V+LY +++I EY+ G ++ L MR T+ + A+E +
Sbjct: 66 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 123
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
++HRD+ N L++ G +++SDFGL + + + ++T SS ++ P
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYT-------SSVGSKFPV- 170
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VG 353
W PEVL+ + + D W+ G +M+E+ +G
Sbjct: 171 ----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 203
Query: 354 YPPF 357
P+
Sbjct: 204 KMPY 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 49/244 (20%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
D L +G G FG V+ + + V A+K +K+ M +E + NL E
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 60
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAIESIHK 234
+V+LY +++I EY+ G ++ L MR T+ + A+E +
Sbjct: 61 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 118
Query: 235 HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAA 294
++HRD+ N L++ G +++SDFGL + + + ++T SS ++ P
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYT-------SSVGSKFPV- 165
Query: 295 PKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VG 353
W PEVL+ + + D W+ G +M+E+ +G
Sbjct: 166 ----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 198
Query: 354 YPPF 357
P+
Sbjct: 199 KMPY 202
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 63/251 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGH---VYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIV 179
+IG G GEV R + G A+K LK R Q +E +++ + D I+
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER--QRRDFLSEASIMGQFDHPNII 113
Query: 180 KLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH--- 236
+L ++ EY+ G + T L D +F + + V + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD------GQFTIMQLVGMLRGVGAGMRYL 167
Query: 237 ----YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
Y+HRD+ N+L+D ++SDFGL + L+ + P
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE----------------------DDP 205
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYE 349
A AY+T G + APE + + + D WS G +M+E
Sbjct: 206 DA-------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 350 MLV-GYPPFYS 359
+L G P+++
Sbjct: 247 VLAYGERPYWN 257
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 72
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y+++EY+ G ++ L +R L + A+
Sbjct: 73 EKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 126
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 108 LQRHKMGADDFELLTMIGKGAFGEVR--VCREKTTGHVYAMKKLKKS-------EMLRRG 158
L+R + D EL G G FG VR V R + A+K LK+ EM+R
Sbjct: 332 LKRDNLLIADIEL----GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 387
Query: 159 QVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDE 217
Q+ H ++D+ IV+L Q E L L+ME GG + L+ +++ +
Sbjct: 388 QIMH---------QLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSN 437
Query: 218 ARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + + ++ + + +++HR++ N+LL + ++SDFGL K L
Sbjct: 438 VAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 72
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y+++EY+ G ++ L +R L + A+
Sbjct: 73 EKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 126
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKIRH 72
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 73 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 126
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 58/246 (23%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV-DS 175
+ +LL IGKG FG+V + + G+ A+K +K + AE +++ ++ S
Sbjct: 22 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHS 74
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETVLAIESIH 233
N + L ++ LY++ EY+ G ++ L + L D + + A+E +
Sbjct: 75 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
++++HRD+ N+L+ + ++SDFGL K +S +
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE-------------------ASSTQDTGK 175
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-- 351
P + + APE L +K + + D WS G +++E+
Sbjct: 176 LPVK-------------------------WTAPEALREKKFSTKSDVWSFGILLWEIYSF 210
Query: 352 --VGYP 355
V YP
Sbjct: 211 GRVPYP 216
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 238
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 239 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASG 292
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVL 227
+ E+ +V+L + Y+I+E++ G+++ L + ++ + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 238
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 239 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASG 292
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 58/246 (23%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV-DS 175
+ +LL IGKG FG+V + + G+ A+K +K + AE +++ ++ S
Sbjct: 7 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHS 59
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETVLAIESIH 233
N + L ++ LY++ EY+ G ++ L + L D + + A+E +
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
++++HRD+ N+L+ + ++SDFGL K +S +
Sbjct: 120 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE-------------------ASSTQDTGK 160
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-- 351
P + + APE L +K + + D WS G +++E+
Sbjct: 161 LPVK-------------------------WTAPEALREKKFSTKSDVWSFGILLWEIYSF 195
Query: 352 --VGYP 355
V YP
Sbjct: 196 GRVPYP 201
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 52/249 (20%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV- 173
A + L T IG G+FG V + K G V A+K LK + E +A RN +A +
Sbjct: 35 ASEVMLSTRIGSGSFGTV--YKGKWHGDV-AVKILKVVD----PTPEQFQAFRNEVAVLR 87
Query: 174 -DSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETVLAIES 231
+ + L+ + + L ++ ++ G + L ++T + +A +T ++
Sbjct: 88 KTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDY 147
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+H + IHRD+K +N+ L + +++ DFGL T+ + +G SQ E+
Sbjct: 148 LHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA-------------TVKSRWSG-SQQVEQ 193
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSLGAIMY 348
P G+ ++APEV+ + + + D +S G ++Y
Sbjct: 194 PT-------------------------GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
Query: 349 EMLVGYPPF 357
E++ G P+
Sbjct: 229 ELMTGELPY 237
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 58/246 (23%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV-DS 175
+ +LL IGKG FG+V + + G+ A+K +K + AE +++ ++ S
Sbjct: 194 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHS 246
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETVLAIESIH 233
N + L ++ LY++ EY+ G ++ L + L D + + A+E +
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPA 293
++++HRD+ N+L+ + ++SDFGL K +S +
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE-------------------ASSTQDTGK 347
Query: 294 APKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-- 351
P + + APE L +K + + D WS G +++E+
Sbjct: 348 LPVK-------------------------WTAPEALREKKFSTKSDVWSFGILLWEIYSF 382
Query: 352 --VGYP 355
V YP
Sbjct: 383 GRVPYP 388
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 126/313 (40%), Gaps = 57/313 (18%)
Query: 109 QRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLR-RGQVEHV---- 163
Q ++G + ++ +G F V ++ +G YA+K+L +E + R ++ V
Sbjct: 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80
Query: 164 --RAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDT---LTEDEA 218
N++ + I K EFL ++ L G ++ L + ++ L+ D
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFL--LLTELCKGQLVEFLKKMESRGPLSCDTV 138
Query: 219 RFYVAETVLAIESIHKHH--YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDF 276
+T A++ +H+ IHRD+K +NLLL G ++L DFG + D+
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS----HYPDY 194
Query: 277 TIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTV---GTPDYIAPEVL-LKK 332
+ W RR L + TP Y PE++ L
Sbjct: 195 S----------------------------WSAQRRALVEEEITRNTTPMYRTPEIIDLYS 226
Query: 333 GY--GMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIEAKD 390
+ G + D W+LG I+Y + PF + +IVN + + P + + ++
Sbjct: 227 NFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----RIVNGKYSIP-PHDTQYTVFHSL 281
Query: 391 LISKLLCNVNQRL 403
+ + L N +RL
Sbjct: 282 IRAMLQVNPEERL 294
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVL 227
+ E+ +V+L + Y+I+E++ G+++ L + ++ + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 63
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I+E++ G+++ L R+ E A Y+A +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 122
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 166
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTG--HVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+E++ +G+GAFG+V C + G HV A+K +K + E R+E +L +++
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHV-AVKIVKNVDR----YCEAARSEIQVLEHLNT 70
Query: 176 N-------CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLT--EDEARFYVAETV 226
C V++ F+ + ++ E L G + L D R +
Sbjct: 71 TDPNSTFRC-VQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H + H D+KP+N+L + + + + + D TL D + + ++
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR--DERTLINPDIKVVD-FGSAT 185
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
++E + + V T Y APEV+L G+ CD WS+G I
Sbjct: 186 YDDEHHS----------------------TLVSTRHYRAPEVILALGWSQPCDVWSIGCI 223
Query: 347 MYEMLVGYPPFYSDD 361
+ E +G+ F + D
Sbjct: 224 LIEYYLGFTVFPTHD 238
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+L+D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE 180
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 61
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 62 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 115
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 116 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 154
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 63
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 64 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 117
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 118 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 156
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV-DS 175
+ +LL IGKG FG+V + + G+ A+K +K + AE +++ ++ S
Sbjct: 13 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHS 65
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK--DTLTEDEARFYVAETVLAIESIH 233
N + L ++ LY++ EY+ G ++ L + L D + + A+E +
Sbjct: 66 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 234 KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
++++HRD+ N+L+ + ++SDFGL K
Sbjct: 126 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMK----KLKKSEMLRRGQVEHVRAERNLL 170
+ F L IG G+FGE+ + T A+K K K ++L ++ + +
Sbjct: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGI 65
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGG--DMMTLLMRKDTLTEDEARFYVAETVLA 228
V + + ++ L+M+ L D+ RK L+ + +
Sbjct: 66 PNVRWFGV--------EGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINR 115
Query: 229 IESIHKHHYIHRDIKPDNLLLD---KYGHLRLSDFGLCKPL-DCSTLQEQDFTIGNNLNG 284
+E +H ++HRDIKPDN L+ + + + DFGL K D ST Q + NL G
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175
Query: 285 SSQ 287
+++
Sbjct: 176 TAR 178
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 67
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I+E++ G+++ L R+ E A Y+A +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 126
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 65
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 66 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASG 119
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 158
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 57/248 (22%)
Query: 123 MIGKGAFGEVRVCREKTTGH---VYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIV 179
+IG G GEV R + G A+K LK R Q +E +++ + D I+
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER--QRRDFLSEASIMGQFDHPNII 113
Query: 180 KLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH--- 236
+L ++ EY+ G + T L D +F + + V + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD------GQFTIMQLVGMLRGVGAGMRYL 167
Query: 237 ----YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
Y+HRD+ N+L+D ++SDFGL + L+ ++
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE---------------------DDPD 206
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 352
AA T + W APE + + + D WS G +M+E+L
Sbjct: 207 AAXTTTGGKIPIRWT-----------------APEAIAFRTFSSASDVWSFGVVMWEVLA 249
Query: 353 -GYPPFYS 359
G P+++
Sbjct: 250 YGERPYWN 257
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 72
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 73 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 126
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 33/174 (18%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE--RNLLAEV 173
+D + +IG+G FG+V R K G L+ ++R + E+ + R+ E+
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMK-EYASKDDHRDFAGEL 76
Query: 174 DSNC-------IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK---------------- 210
+ C I+ L + + +LYL +EY P G+++ L +
Sbjct: 77 EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
TL+ + + A+ ++ + + +IHRD+ N+L+ + +++DFGL +
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 73/299 (24%)
Query: 166 ERNLLAEVDSNC-IVKLYCSFQDDEFLYL--------IMEYLPGGDMMTLLMRKDTLTED 216
E LL E D + +++ +C+ +D +F Y+ + EY+ D L + TL +
Sbjct: 67 EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ- 125
Query: 217 EARFYVAETVLAIESIHKHHYIHRDIKPDNLLL---DKYGHLR--LSDFGLCKPLDCSTL 271
+T + +H + +HRD+KP N+L+ + +G ++ +SDFGLCK L
Sbjct: 126 -------QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV--- 175
Query: 272 QEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL-- 329
G + R P GT +IAPE+L
Sbjct: 176 ------------GRHSFSRRSGVP-----------------------GTEGWIAPEMLSE 200
Query: 330 -LKKGYGMECDWWSLGAIMYEMLV-GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSIE 387
K+ D +S G + Y ++ G PF + PE+ + +
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE-DVI 259
Query: 388 AKDLISKLLCNVNQRLGAKGADEIKVHPWFDGVDWARIYQMEAAFIPEVNDELDTQNFE 446
A++LI K++ Q+ A + HP+F W+ Q++ F +V+D ++ ++ +
Sbjct: 260 ARELIEKMIAMDPQK--RPSAKHVLKHPFF----WSLEKQLQ--FFQDVSDRIEKESLD 310
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 72
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 73 EKLVQLY-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 126
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 238
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 239 EKLVQLY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASG 292
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGNM----SPEAFLQEAQVMKKLRH 239
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 240 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 293
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 294 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIE 332
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 33/174 (18%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE--RNLLAEV 173
+D + +IG+G FG+V R K G L+ ++R + E+ + R+ E+
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMK-EYASKDDHRDFAGEL 66
Query: 174 DSNC-------IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK---------------- 210
+ C I+ L + + +LYL +EY P G+++ L +
Sbjct: 67 EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 126
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
TL+ + + A+ ++ + + +IHRD+ N+L+ + +++DFGL +
Sbjct: 127 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 43/156 (27%)
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQ 287
A+E +H +HRD+KP N+ +++ DFGL +D ++ T
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---------- 225
Query: 288 NNERPAAPKRTQQEQLQHWQKNRRMLAYST----VGTPDYIAPEVLLKKGYGMECDWWSL 343
M AY+T VGT Y++PE + Y + D +SL
Sbjct: 226 -----------------------PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSL 262
Query: 344 GAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFP 379
G I++E+L + M R I + R +LKFP
Sbjct: 263 GLILFELLYSF-----STQMERVRIITDVR-NLKFP 292
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLK--KSEMLRRGQVEHVRAERNLLAEVD 174
DFE + +G+G FG V + K YA+K+++ E+ R + V+A LA+++
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA----LAKLE 62
Query: 175 SNCIVKLY 182
IV+ +
Sbjct: 63 HPGIVRYF 70
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L + ++ + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L + TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 67
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L + ++ + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 63
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 122
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 166
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L + ++ + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 228 AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 69
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A +
Sbjct: 70 EKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA-----QIASG 123
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 67
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 126
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 100/258 (38%), Gaps = 63/258 (24%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGH---VYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
A ++ +IG G FGEV R K G A+K LK + Q +E +++
Sbjct: 13 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMG 70
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
+ D I+ L + + +I EY+ G + L + D RF V + V +
Sbjct: 71 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRG 124
Query: 232 IHK-------HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNG 284
I Y+HRD+ N+L++ ++SDFG+ + L+
Sbjct: 125 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE----------------- 167
Query: 285 SSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTP---DYIAPEVLLKKGYGMECDWW 341
+ P A AY+T G + APE + + + D W
Sbjct: 168 -----DDPEA-------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 203
Query: 342 SLGAIMYEML-VGYPPFY 358
S G +M+E++ G P++
Sbjct: 204 SYGIVMWEVMSYGERPYW 221
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 64
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 123
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
+M D + +G G +GEV K A+K LK+ M +VE E ++
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMK 271
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--MRKDTLTEDEARFYVAETVLAI 229
E+ +V+L + Y+I E++ G+++ L + ++ + + A+
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 331
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
E + K ++IHR++ N L+ + ++++DFGL + + T
Sbjct: 332 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 55/247 (22%)
Query: 123 MIGKGAFGEVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIV 179
+IG G FGEV R K G A+K LK R Q +E +++ + + I+
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER--QRREFLSEASIMGQFEHPNII 78
Query: 180 KLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH------ 233
+L + + ++ E++ G + + L D +F V + V + I
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLND------GQFTVIQLVGMLRGIASGMRYL 132
Query: 234 -KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+ Y+HRD+ N+L++ ++SDFGL + L+ ++ D T ++L G
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS---SDPTYTSSLGGK------- 182
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML- 351
P R + APE + + + D WS G +M+E++
Sbjct: 183 -IPIR-------------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
Query: 352 VGYPPFY 358
G P++
Sbjct: 217 FGERPYW 223
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
+M D + +G G +GEV K A+K LK+ M +VE E ++
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMK 268
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL-A 228
E+ +V+L + Y+I E++ G+++ L R+ E A Y+A + A
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 327
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+E + K ++IHR++ N L+ + ++++DFGL + + T
Sbjct: 328 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 369
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 67
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 126
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMK----KLKKSEMLRRGQVEHVRAERNLL 170
+ + L IG G+FG++ + + G A+K K K ++ H+ ++ +
Sbjct: 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-------HIESKIYKM 60
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGG--DMMTLLMRKDTLTEDEARFYVAETVLA 228
+ +C + D + ++ME L D+ RK +L + +A+ +++
Sbjct: 61 MQGGVGIPTIRWCGAEGD-YNVMVMELLGPSLEDLFNFCSRKFSL---KTVLLLADQMIS 116
Query: 229 -IESIHKHHYIHRDIKPDNLL--LDKYGHL-RLSDFGLCKPL-DCSTLQEQDFTIGNNLN 283
IE IH ++IHRD+KPDN L L K G+L + DFGL K D T Q + NL
Sbjct: 117 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 176
Query: 284 GSSQ 287
G+++
Sbjct: 177 GTAR 180
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 75
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 134
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 135 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 178
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 67
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 126
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 66
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 125
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 126 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 169
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 69
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A +
Sbjct: 70 EKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA-----QIASG 123
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 64
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 123
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMK----KLKKSEMLRRGQVEHVRAERNLL 170
+ + L IG G+FG++ + + G A+K K K ++ H+ ++ +
Sbjct: 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-------HIESKIYKM 58
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGG--DMMTLLMRKDTLTEDEARFYVAETVLA 228
+ +C + D + ++ME L D+ RK +L + +A+ +++
Sbjct: 59 MQGGVGIPTIRWCGAEGD-YNVMVMELLGPSLEDLFNFCSRKFSL---KTVLLLADQMIS 114
Query: 229 -IESIHKHHYIHRDIKPDNLL--LDKYGHL-RLSDFGLCKPL-DCSTLQEQDFTIGNNLN 283
IE IH ++IHRD+KPDN L L K G+L + DFGL K D T Q + NL
Sbjct: 115 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 174
Query: 284 GSSQ 287
G+++
Sbjct: 175 GTAR 178
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 72
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 73 EKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 126
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD+ N+L+ + +++DFGL + ++
Sbjct: 127 MAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIE 165
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 4 SDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 59
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E + +A +T
Sbjct: 60 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 118
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL T+ + +GS
Sbjct: 119 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-------------TVKSRWSGSH 165
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSL 343
Q EQL G+ ++APEV+ + Y + D ++
Sbjct: 166 QF------------EQLS--------------GSILWMAPEVIRMQDSNPYSFQSDVYAF 199
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 200 GIVLYELMTGQLPY 213
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 64
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 123
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 72
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E +Y++ EY+ G ++ L +R L + A+
Sbjct: 73 EKLVQLY-AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD-----MAAQIASG 126
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 47/188 (25%)
Query: 188 DEFLYLIMEYLPGG---DMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKP 244
+++L +IMEY+P + + + ++ + Y+ + A+ IH HRDIKP
Sbjct: 110 NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP 169
Query: 245 DNLLLD-KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
NLL++ K L+L DFG K L P+ P
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKKL------------------------IPSEP-------- 197
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGAIMYEMLVGYPPFYSDDP 362
+ + + + Y APE++L Y D WS+G + E+++G P F +
Sbjct: 198 ----------SVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS 247
Query: 363 MSTCRKIV 370
+ +I+
Sbjct: 248 IDQLVRII 255
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 12/228 (5%)
Query: 50 AAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQ 109
A + +I KE + L + N ++ + VS + ++ + +++++T M
Sbjct: 323 GATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPST 382
Query: 110 R-HKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHV 163
R +++ + EL IG+G FG+V + A+K K S+ +R E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKF 438
Query: 164 RAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYV 222
E + + D IVKL ++ +++IME G++ + L +RK +L Y
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+ A+ + ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 545
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 121
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
+ +M D + +G G +GEV K A+K LK+ M +VE E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL 227
+ E+ +V+L + Y+I E++ G+++ L R+ E A Y+A +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQIS 121
Query: 228 -AIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+E + K ++IHRD+ N L+ + ++++DFGL + + T
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
+M D + +G G +GEV K A+K LK+ M +VE E ++
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMK 310
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEA--RFYVAETVL-A 228
E+ +V+L + Y+I E++ G+++ L R+ E A Y+A + A
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 369
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+E + K ++IHR++ N L+ + ++++DFGL + + T
Sbjct: 370 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 411
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 63/250 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGH---VYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIV 179
+IG G FGEV R K G A+K LK + Q +E +++ + D I+
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPNII 72
Query: 180 KLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK----- 234
L + + +I EY+ G + L + D RF V + V + I
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 126
Query: 235 --HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
Y+HRD+ N+L++ ++SDFG+ + L+ + P
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE----------------------DDP 164
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYE 349
A AY+T G + APE + + + D WS G +M+E
Sbjct: 165 EA-------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 205
Query: 350 ML-VGYPPFY 358
++ G P++
Sbjct: 206 VMSYGERPYW 215
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMK----KLKKSEMLRRGQVEHVRAERNLL 170
+ + L IG G+FG++ + +G A+K K K ++ H+ ++ +
Sbjct: 8 GNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQL-------HIESKFYKM 60
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGG--DMMTLLMRKDTLTEDEARFYVAETVLA 228
+ +C + D + ++ME L D+ RK +L + +A+ +++
Sbjct: 61 MQGGVGIPSIKWCGAEGD-YNVMVMELLGPSLEDLFNFCSRKFSL---KTVLLLADQMIS 116
Query: 229 -IESIHKHHYIHRDIKPDNLL--LDKYGHL-RLSDFGLCKPL-DCSTLQEQDFTIGNNLN 283
IE IH ++IHRD+KPDN L L K G+L + DFGL K D T Q + NL
Sbjct: 117 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 176
Query: 284 GSSQ 287
G+++
Sbjct: 177 GTAR 180
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 12/228 (5%)
Query: 50 AAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQ 109
A + +I KE + L + N ++ + VS + ++ + +++++T M
Sbjct: 323 GATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPST 382
Query: 110 R-HKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHV 163
R +++ + EL IG+G FG+V + A+K K S+ +R E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKF 438
Query: 164 RAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYV 222
E + + D IVKL ++ +++IME G++ + L +RK +L Y
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+ A+ + ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 55/247 (22%)
Query: 123 MIGKGAFGEVRVCREKTTG---HVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIV 179
+IG G FGEV R K G A+K LK R Q +E +++ + + I+
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER--QRREFLSEASIMGQFEHPNII 80
Query: 180 KLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIH------ 233
+L + + ++ E++ G + + L D +F V + V + I
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLND------GQFTVIQLVGMLRGIASGMRYL 134
Query: 234 -KHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+ Y+HRD+ N+L++ ++SDFGL + L+ ++ D T ++L G
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS---SDPTETSSLGGK------- 184
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML- 351
P R + APE + + + D WS G +M+E++
Sbjct: 185 -IPIR-------------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
Query: 352 VGYPPFY 358
G P++
Sbjct: 219 FGERPYW 225
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 95
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 96 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 145
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 95
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 96 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 145
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 33/174 (18%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE--RNLLAEV 173
+D + +IG+G FG+V R K G L+ ++R + E+ + R+ E+
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMK-EYASKDDHRDFAGEL 73
Query: 174 DSNC-------IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK---------------- 210
+ C I+ L + + +LYL +EY P G+++ L +
Sbjct: 74 EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 133
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
TL+ + + A+ ++ + + +IHR++ N+L+ + +++DFGL +
Sbjct: 134 STLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 146
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 101
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 102 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 151
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 152 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 185
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 66/244 (27%)
Query: 123 MIGKGAFGEVRVCREKTTGH---VYAMKKLKK--SEMLRRGQVEHVRAERNLLAEVDSNC 177
+IG G FGEV R K G A+K LK +E RR + E +++ + D
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 84
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH- 236
I+ L + + ++ EY+ G + T L + D +F V + V + I
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND------GQFTVIQLVGMLRGISAGMK 138
Query: 237 ------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNE 290
Y+HRD+ N+L++ ++SDFGL + L+ +
Sbjct: 139 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----------------------D 176
Query: 291 RPAAPKRTQQEQLQHWQKNRRMLAYSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIM 347
P A AY+T G + APE + + + D WS G +M
Sbjct: 177 DPEA-------------------AYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVM 217
Query: 348 YEML 351
+E++
Sbjct: 218 WEVV 221
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
DD++L+ +G+G + EV + + KK +E++R N++
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 94
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
D IVK S L+ E++ D L TLT+ + RFY+ E + A++
Sbjct: 95 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDY 144
Query: 232 IHKHHYIHRDIKPDNLLLD-KYGHLRLSDFGLCK 264
H +HRD+KP N+++D ++ LRL D+GL +
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 178
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 107 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 163
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 164 LRKLRLIDWGLAE 176
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 162 LRKLRLIDWGLAE 174
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 106 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 163 LRKLRLIDWGLAE 175
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 106 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 163 LRKLRLIDWGLAE 175
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 162 LRKLRLIDWGLAE 174
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 162 LRKLRLIDWGLAE 174
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 162 LRKLRLIDWGLAE 174
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 162 LRKLRLIDWGLAE 174
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 117/295 (39%), Gaps = 68/295 (23%)
Query: 86 VSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+ E + N F++ + Y ++ + ++ + +G GAFG+V G A
Sbjct: 18 IIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 75
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEV-------DSNCIVKLYCSFQDDEFLYLIMEYL 198
+ K+ +ML+ H + L++E+ IV L + + +I EY
Sbjct: 76 VLKVA-VKMLK--STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132
Query: 199 PGGDMMTLLMRKDTLTEDEARFYVAETVLA--------------IESIHKHHYIHRDIKP 244
GD++ L RK + E + F +A + L+ + + + IHRD+
Sbjct: 133 CYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAA 192
Query: 245 DNLLLDKYGHL-RLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
N+LL GH+ ++ DFGL + I N+ N + N R P +
Sbjct: 193 RNVLLTN-GHVAKIGDFGLAR------------DIMNDSNYIVKGNAR--LPVK------ 231
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
++APE + Y ++ D WS G +++E+ +G P+
Sbjct: 232 -------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 126 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 182
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 183 LRKLRLIDWGLAE 195
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 193 LIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD-K 251
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D +
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 252 YGHLRLSDFGLCK 264
LRL D+GL +
Sbjct: 162 LRKLRLIDWGLAE 174
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 56/240 (23%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AERNLLAEVDSNCI 178
+IG G FGEV K G +K L+ G E R +E +++ + D +
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKT---LKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 179 VKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK---- 234
+ L + +I E++ G + + L + D +F V + V + I
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQND------GQFTVIQLVGMLRGIAAGMKY 150
Query: 235 ---HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+Y+HRD+ N+L++ ++SDFGL + L+ T D T + L G
Sbjct: 151 LADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT---SDPTYTSALGGK------ 201
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
P R + APE + + + D WS G +M+E++
Sbjct: 202 --IPIR-------------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 40/183 (21%)
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHY 237
+V ++ + D LY+ + G D+ L R+ L A V + A+++ H
Sbjct: 96 VVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA 155
Query: 238 IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKR 297
HRD+KP+N+L+ L DFG+ +T E+ +GN
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIAS----ATTDEKLTQLGN----------------- 194
Query: 298 TQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
TVGT Y APE + D ++L ++YE L G PP+
Sbjct: 195 -------------------TVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPY 235
Query: 358 YSD 360
D
Sbjct: 236 QGD 238
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 55/255 (21%)
Query: 114 GADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE 166
ADD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNE 70
Query: 167 RNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ET 225
+L + I+ L+ + L ++ ++ G + L +T E + +A +T
Sbjct: 71 VGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGS 285
++ +H IHRD+K +N+ L + +++ DFGL
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA---------------------- 167
Query: 286 SQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWS 342
E+ Q EQL G+ ++APEV+ + Y + D ++
Sbjct: 168 ---TEKSRWSGSHQFEQLS--------------GSILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 343 LGAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 211 FGIVLYELMTGQLPY 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 105 YMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR 164
+M L+R ++ LL +G G FG V++ + K V A+K +K+ M +
Sbjct: 2 HMELKR-----EEITLLKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSE----DEFF 51
Query: 165 AERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED----EARF 220
E + ++ +VK Y + +Y++ EY+ G ++ L E E +
Sbjct: 52 QEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY 111
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
V E + +ES H +IHRD+ N L+D+ +++SDFG+ +
Sbjct: 112 DVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 43/255 (16%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTG--HVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+E++ +G+GAFG+V C + G HV A+K +K + E R+E +L +++
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHV-AVKIVKNVDR----YCEAARSEIQVLEHLNT 70
Query: 176 N-------CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLT--EDEARFYVAETV 226
C V++ F+ + ++ E L G + L D R +
Sbjct: 71 TDPNSTFRC-VQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H + H D+KP+N+L + + + + + D TL D + + ++
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR--DERTLINPDIKVVD-FGSAT 185
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
++E + + V Y APEV+L G+ CD WS+G I
Sbjct: 186 YDDEHHS----------------------TLVXXRHYRAPEVILALGWSQPCDVWSIGCI 223
Query: 347 MYEMLVGYPPFYSDD 361
+ E +G+ F + D
Sbjct: 224 LIEYYLGFTVFPTHD 238
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 43/255 (16%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEV-DS 175
+E++ +G+G FG+V C + G A+K ++ R E R E N+L ++ +
Sbjct: 30 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR----EAARLEINVLKKIKEK 85
Query: 176 NCIVKLYCSFQDDEFLY----LIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAI 229
+ K C D F + I L G + L + R + A+
Sbjct: 86 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 145
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRL-SDFGLC--KPLDCSTLQEQDFTIGNNLNGSS 286
+H++ H D+KP+N+L L ++ C K + ++++ DF GS+
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF-------GSA 198
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+ + V T Y PEV+L+ G+ CD WS+G I
Sbjct: 199 TFDHEHHT---------------------TIVATRHYRPPEVILELGWAQPCDVWSIGCI 237
Query: 347 MYEMLVGYPPFYSDD 361
++E G+ F + +
Sbjct: 238 LFEYYRGFTLFQTHE 252
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 85
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 139
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 186
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 43/255 (16%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEV-DS 175
+E++ +G+G FG+V C + G A+K ++ R E R E N+L ++ +
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR----EAARLEINVLKKIKEK 76
Query: 176 NCIVKLYCSFQDDEFLY----LIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAI 229
+ K C D F + I L G + L + R + A+
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 136
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRL-SDFGLC--KPLDCSTLQEQDFTIGNNLNGSS 286
+H++ H D+KP+N+L L ++ C K + ++++ DF GS+
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF-------GSA 189
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+ + V T Y PEV+L+ G+ CD WS+G I
Sbjct: 190 TFDHEHHT---------------------TIVATRHYRPPEVILELGWAQPCDVWSIGCI 228
Query: 347 MYEMLVGYPPFYSDD 361
++E G+ F + +
Sbjct: 229 LFEYYRGFTLFQTHE 243
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 43/255 (16%)
Query: 118 FELLTMIGKGAFGEVRVCREKTTGHV-YAMKKLKKSEMLRRGQVEHVRAERNLLAEV-DS 175
+E++ +G+G FG+V C + G A+K ++ R E R E N+L ++ +
Sbjct: 53 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR----EAARLEINVLKKIKEK 108
Query: 176 NCIVKLYCSFQDDEFLY----LIMEYLPGGDMMTLLMRKD--TLTEDEARFYVAETVLAI 229
+ K C D F + I L G + L + R + A+
Sbjct: 109 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 168
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGHLRL-SDFGLC--KPLDCSTLQEQDFTIGNNLNGSS 286
+H++ H D+KP+N+L L ++ C K + ++++ DF GS+
Sbjct: 169 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF-------GSA 221
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 346
+ + V T Y PEV+L+ G+ CD WS+G I
Sbjct: 222 TFDHEHHT---------------------TIVATRHYRPPEVILELGWAQPCDVWSIGCI 260
Query: 347 MYEMLVGYPPFYSDD 361
++E G+ F + +
Sbjct: 261 LFEYYRGFTLFQTHE 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 68
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 122
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 169
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE 198
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 54/220 (24%)
Query: 149 LKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLY--------------CSFQDDEFLYLI 194
+KK + V+H E ++ +D + IVK++ S + +Y++
Sbjct: 41 IKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIV 100
Query: 195 MEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGH 254
EY+ D+ +L + L E+ AR ++ + + ++ IH + +HRD+KP NL ++
Sbjct: 101 QEYMET-DLANVL-EQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDL 158
Query: 255 -LRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRML 313
L++ DFGL + +D + + G + W ++ R+L
Sbjct: 159 VLKIGDFGLARIMDPHYSHKGHLSEG----------------------LVTKWYRSPRLL 196
Query: 314 AYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 353
L Y D W+ G I EML G
Sbjct: 197 ---------------LSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 116 DDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+ L +G+G FGEV + T V A+K LK M E E ++ ++
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRH 62
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARFYVAETVLA 228
+V+LY + +E + ++ EY+ G ++ L +R L + A+
Sbjct: 63 EKLVQLY-AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASG 116
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + +Y+HRD++ N+L+ + +++DFGL + ++
Sbjct: 117 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 155
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 95
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 149
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 150 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 196
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 16 SDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 71
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E + +A +T
Sbjct: 72 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 130
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA----------------------- 167
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSL 343
E+ Q EQL G+ ++APEV+ + Y + D ++
Sbjct: 168 --TEKSRWSGSHQFEQLS--------------GSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 212 GIVLYELMTGQLPY 225
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 96/250 (38%), Gaps = 63/250 (25%)
Query: 123 MIGKGAFGEVRVCREKTTGH---VYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIV 179
+IG G FGEV R K G A+K LK + Q +E +++ + D I+
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPNII 93
Query: 180 KLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK----- 234
L + + +I EY+ G + L + D RF V + V + I
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 147
Query: 235 --HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERP 292
+HRD+ N+L++ ++SDFG+ + L+ + P
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE----------------------DDP 185
Query: 293 AAPKRTQQEQLQHWQKNRRMLAYSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYE 349
A AY+T G + APE + + + D WS G +M+E
Sbjct: 186 EA-------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 226
Query: 350 ML-VGYPPFY 358
++ G P++
Sbjct: 227 VMSYGERPYW 236
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 106/285 (37%), Gaps = 56/285 (19%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCR-EKTTGHVY--AMKKLKKSEMLRRGQVEHVRAERNL 169
+G D LL +G G+FG VR + +G A+K LK + + ++ E N
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF-------YV 222
+ +D +++LY + ++ E P G ++ D L + + F Y
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 121
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
+ + + +IHRD+ NLLL +++ DFGL + L
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---------------- 165
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
QN++ + + R + ++ + APE L + + D W
Sbjct: 166 ---PQNDD-------------HYVMQEHRKVPFA------WCAPESLKTRTFSHASDTWM 203
Query: 343 LGAIMYEMLV-GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI 386
G ++EM G P+ + KI L PE+ I
Sbjct: 204 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 248
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 27 SDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 82
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E +A +T
Sbjct: 83 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 141
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL T+ + +GS
Sbjct: 142 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGSH 188
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSL 343
Q EQL G+ ++APEV+ K Y + D ++
Sbjct: 189 QF------------EQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAF 222
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 223 GIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 28 SDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 83
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E +A +T
Sbjct: 84 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 142
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL T+ + +GS
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGSH 189
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSL 343
Q EQL G+ ++APEV+ K Y + D ++
Sbjct: 190 QF------------EQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 224 GIVLYELMTGQLPY 237
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 60
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E +A +T
Sbjct: 61 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL T+ + +GS
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGSH 166
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSL 343
Q EQL G+ ++APEV+ K Y + D ++
Sbjct: 167 QF------------EQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 201 GIVLYELMTGQLPY 214
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 111 HKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRA 165
+++ + EL IG+G FG+V + A+K K S+ +R E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKFLQ 60
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAE 224
E + + D IVKL ++ +++IME G++ + L +RK +L Y +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 225 TVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+ + ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 60
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E +A +T
Sbjct: 61 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL T+ + +GS
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGSH 166
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSL 343
Q EQL G+ ++APEV+ K Y + D ++
Sbjct: 167 QF------------EQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 201 GIVLYELMTGQLPY 214
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 111 HKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLK--KSEMLRRGQVEHVRA 165
+++ + EL IG+G FG+V + A+K K S+ +R E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKFLQ 60
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAE 224
E + + D IVKL ++ +++IME G++ + L +RK +L Y +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 225 TVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+ + ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 165
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 116/295 (39%), Gaps = 68/295 (23%)
Query: 86 VSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+ E + N F++ + Y ++ + ++ + +G GAFG+V G A
Sbjct: 18 IIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 75
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEV-------DSNCIVKLYCSFQDDEFLYLIMEYL 198
+ K+ +ML+ H + L++E+ IV L + + +I EY
Sbjct: 76 VLKVA-VKMLK--STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132
Query: 199 PGGDMMTLLMRKDTLTEDEARFYVAETVLA--------------IESIHKHHYIHRDIKP 244
GD++ L RK + E + F +A + + + + + IHRD+
Sbjct: 133 CYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAA 192
Query: 245 DNLLLDKYGHL-RLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQL 303
N+LL GH+ ++ DFGL + I N+ N + N R P +
Sbjct: 193 RNVLLTN-GHVAKIGDFGLAR------------DIMNDSNYIVKGNAR--LPVK------ 231
Query: 304 QHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
++APE + Y ++ D WS G +++E+ +G P+
Sbjct: 232 -------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 57
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E +A +T
Sbjct: 58 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 116
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL T+ + +GS
Sbjct: 117 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGSH 163
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSL 343
Q EQL G+ ++APEV+ K Y + D ++
Sbjct: 164 QF------------EQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAF 197
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 198 GIVLYELMTGQLPY 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 118 FELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRAERNLLAE 172
EL IG+G FG+V + A+K K S+ +R E E + +
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKFLQEALTMRQ 67
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAETVLAIES 231
D IVKL ++ +++IME G++ + L +RK +L Y + A+
Sbjct: 68 FDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+ ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 106/285 (37%), Gaps = 56/285 (19%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCR-EKTTGHVY--AMKKLKKSEMLRRGQVEHVRAERNL 169
+G D LL +G G+FG VR + +G A+K LK + + ++ E N
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF-------YV 222
+ +D +++LY + ++ E P G ++ D L + + F Y
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 127
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
+ + + +IHRD+ NLLL +++ DFGL + L
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---------------- 171
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
QN++ + + R + ++ + APE L + + D W
Sbjct: 172 ---PQNDD-------------HYVMQEHRKVPFA------WCAPESLKTRTFSHASDTWM 209
Query: 343 LGAIMYEMLV-GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI 386
G ++EM G P+ + KI L PE+ I
Sbjct: 210 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 254
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ EY+ G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I ++HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 118 FELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRAERNLLAE 172
EL IG+G FG+V + A+K K S+ +R E E + +
Sbjct: 15 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQ 70
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAETVLAIES 231
D IVKL ++ +++IME G++ + L +RK +L Y + A+
Sbjct: 71 FDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+ ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 130 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 168
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 111 HKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRA 165
+++ + EL IG+G FG+V + A+K K S+ +R E
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQ 57
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAE 224
E + + D IVKL ++ +++IME G++ + L +RK +L Y +
Sbjct: 58 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 116
Query: 225 TVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+ + ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 111 HKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRA 165
+++ + EL IG+G FG+V + A+K K S+ +R E
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQ 62
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAE 224
E + + D IVKL ++ +++IME G++ + L +RK +L Y +
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 121
Query: 225 TVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+ + ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 167
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 118 FELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRAERNLLAE 172
EL IG+G FG+V + A+K K S+ +R E E + +
Sbjct: 40 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQ 95
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAETVLAIES 231
D IVKL ++ +++IME G++ + L +RK +L Y + A+
Sbjct: 96 FDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 154
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+ ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 155 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 193
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 106/285 (37%), Gaps = 56/285 (19%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCR-EKTTGHVY--AMKKLKKSEMLRRGQVEHVRAERNL 169
+G D LL +G G+FG VR + +G A+K LK + + ++ E N
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 170 LAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF-------YV 222
+ +D +++LY + ++ E P G ++ D L + + F Y
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 127
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNL 282
+ + + +IHRD+ NLLL +++ DFGL + L
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---------------- 171
Query: 283 NGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 342
QN++ QE R + ++ + APE L + + D W
Sbjct: 172 ---PQNDDH-----XVMQEH--------RKVPFA------WCAPESLKTRTFSHASDTWM 209
Query: 343 LGAIMYEMLV-GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI 386
G ++EM G P+ + KI L PE+ I
Sbjct: 210 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 254
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 118 FELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRAERNLLAE 172
EL IG+G FG+V + A+K K S+ +R E E + +
Sbjct: 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQ 72
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAETVLAIES 231
D IVKL ++ +++IME G++ + L +RK +L Y + A+
Sbjct: 73 FDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
+ ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG G+FG V + K G V A+K L + + Q++ + E +L + I+ L+
Sbjct: 16 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETVLAIESIHKHHYIHRDI 242
+ L ++ ++ G + L +T E +A +T ++ +H IHRD+
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K +N+ L + +++ DFGL T+ + +GS Q EQ
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGSHQF------------EQ 165
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 357
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 166 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG G+FG V + K G V A+K L + + Q++ + E +L + I+ L+
Sbjct: 16 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETVLAIESIHKHHYIHRDI 242
+ L ++ ++ G + L +T E +A +T ++ +H IHRD+
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K +N+ L + +++ DFGL T+ + +GS Q EQ
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGSHQF------------EQ 165
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 357
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 166 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 192 YLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDK 251
+L+ME LPG + +L + + ++ + ++ A+E K + H D++P N+++D
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALE---KQGFWHDDVRPWNVMVDA 374
Query: 252 YGHLRLSDFG--LCKPLDCS---TLQEQDFTIGNNL 282
H RL DFG + P DCS L + F N L
Sbjct: 375 RQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNEL 410
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 192 YLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDK 251
+L+ME LPG + +L + + ++ + ++ A+E K + H D++P N+++D
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALE---KQGFWHDDVRPWNVMVDA 374
Query: 252 YGHLRLSDFG--LCKPLDCS---TLQEQDFTIGNNL 282
H RL DFG + P DCS L + F N L
Sbjct: 375 RQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNEL 410
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 111 HKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKK--SEMLRRGQVEHVRA 165
+++ + EL IG+G FG+V + A+K K S+ +R E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQ 60
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARFYVAE 224
E + + D IVKL ++ +++IME G++ + L +RK +L Y +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 225 TVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
A+ + ++HRDI N+L+ ++L DFGL + ++ ST
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 105/287 (36%), Gaps = 60/287 (20%)
Query: 113 MGADDFELLTMIGKGAFGEVR-----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+G D LL +G G+FG VR KT A+K LK + + ++ E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 66
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF------- 220
N + +D +++LY + ++ E P G ++ D L + + F
Sbjct: 67 NAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSR 119
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
Y + + + +IHRD+ NLLL +++ DFGL + L
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-------------- 165
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
QN++ + + R + ++ + APE L + + D
Sbjct: 166 -----PQNDD-------------HYVMQEHRKVPFA------WCAPESLKTRTFSHASDT 201
Query: 341 WSLGAIMYEMLV-GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI 386
W G ++EM G P+ + KI L PE+ I
Sbjct: 202 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 248
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 105/287 (36%), Gaps = 60/287 (20%)
Query: 113 MGADDFELLTMIGKGAFGEVR-----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+G D LL +G G+FG VR KT A+K LK + + ++ E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 62
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF------- 220
N + +D +++LY + ++ E P G ++ D L + + F
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSR 115
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
Y + + + +IHRD+ NLLL +++ DFGL + L
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-------------- 161
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
QN++ + + R + ++ + APE L + + D
Sbjct: 162 -----PQNDD-------------HYVMQEHRKVPFA------WCAPESLKTRTFSHASDT 197
Query: 341 WSLGAIMYEMLV-GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI 386
W G ++EM G P+ + KI L PE+ I
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 244
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 105/287 (36%), Gaps = 60/287 (20%)
Query: 113 MGADDFELLTMIGKGAFGEVR-----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+G D LL +G G+FG VR KT A+K LK + + ++ E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 62
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF------- 220
N + +D +++LY + ++ E P G ++ D L + + F
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSR 115
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
Y + + + +IHRD+ NLLL +++ DFGL + L
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-------------- 161
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
QN++ QE R + ++ + APE L + + D
Sbjct: 162 -----PQNDDH-----XVMQEH--------RKVPFA------WCAPESLKTRTFSHASDT 197
Query: 341 WSLGAIMYEMLV-GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI 386
W G ++EM G P+ + KI L PE+ I
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 244
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE 166
++ + +D L ++G+G FGEV K A+K KK L E +E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSE 75
Query: 167 RNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAET 225
++ +D IVKL ++E ++IME P G++ L R K++L Y +
Sbjct: 76 AVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 134
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGL 262
A+ + + +HRDI N+L+ ++L DFGL
Sbjct: 135 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 171
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE 166
++ + +D L ++G+G FGEV K A+K KK L E +E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSE 59
Query: 167 RNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAET 225
++ +D IVKL ++E ++IME P G++ L R K++L Y +
Sbjct: 60 AVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 118
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGL 262
A+ + + +HRDI N+L+ ++L DFGL
Sbjct: 119 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 155
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVR---VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAE 166
++ + +D L ++G+G FGEV K A+K KK L E +E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSE 63
Query: 167 RNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR-KDTLTEDEARFYVAET 225
++ +D IVKL ++E ++IME P G++ L R K++L Y +
Sbjct: 64 AVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 122
Query: 226 VLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGL 262
A+ + + +HRDI N+L+ ++L DFGL
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 159
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 105/287 (36%), Gaps = 60/287 (20%)
Query: 113 MGADDFELLTMIGKGAFGEVR-----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+G D LL +G G+FG VR KT A+K LK + + ++ E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 62
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARF------- 220
N + +D +++LY + ++ E P G ++ D L + + F
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSR 115
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
Y + + + +IHRD+ NLLL +++ DFGL + L
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-------------- 161
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
QN++ + + R + ++ + APE L + + D
Sbjct: 162 -----PQNDD-------------HYVMQEHRKVPFA------WCAPESLKTRTFSHASDT 197
Query: 341 WSLGAIMYEMLV-GYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSI 386
W G ++EM G P+ + KI L PE+ I
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 244
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 63/255 (24%)
Query: 124 IGKGAFGEV------RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNC 177
+G+GAFG+V +C E+ V A+K LK + R + E LL +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILV-AVKTLKDASDNAR---KDFHREAELLTNLQHEH 76
Query: 178 IVKLYCSFQDDEFLYLIMEYLPGGDMM---------TLLMRKDT----LTEDEARFYVAE 224
IVK Y + + L ++ EY+ GD+ +LM + LT+ + +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 225 TVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNG 284
+ + H++HRD+ N L+ + +++ DFG+ + + +G +
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRVGGH--- 189
Query: 285 SSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 344
P R ++ PE ++ + + E D WSLG
Sbjct: 190 -------TMLPIR-------------------------WMPPESIMYRKFTTESDVWSLG 217
Query: 345 AIMYEMLV-GYPPFY 358
+++E+ G P+Y
Sbjct: 218 VVLWEIFTYGKQPWY 232
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 95/249 (38%), Gaps = 60/249 (24%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AERNLLAEVDSNCI 178
+IG G FGEV KT+ + K+ L+ G E R E ++ + + I
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKT--LKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 179 VKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK---- 234
++L + + +I EY+ G + L KD F V + V + I
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKD------GEFSVLQLVGMLRGIAAGMKY 162
Query: 235 ---HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+Y+HRD+ N+L++ ++SDFGL + L+ +
Sbjct: 163 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE----------------------DD 200
Query: 292 PAAPKRTQQEQLQ-HWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 350
P A T ++ W APE + + + D WS G +M+E+
Sbjct: 201 PEATYTTSGGKIPIRWT-----------------APEAISYRKFTSASDVWSFGIVMWEV 243
Query: 351 LV-GYPPFY 358
+ G P++
Sbjct: 244 MTYGERPYW 252
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 57/248 (22%)
Query: 123 MIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AERNLLAEVDSNCI 178
+IG G FGEV K G +K L+ G E R +E +++ + D +
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKT---LKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 179 VKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHK---- 234
+ L + +I E++ G + + L + D +F V + V + I
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQND------GQFTVIQLVGMLRGIAAGMKY 124
Query: 235 ---HHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNER 291
+Y+HR + N+L++ ++SDFGL + L+ T D T + L G
Sbjct: 125 LADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDT---SDPTYTSALGGK------ 175
Query: 292 PAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
P R + APE + + + D WS G +M+E++
Sbjct: 176 --IPIR-------------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
Query: 352 -VGYPPFY 358
G P++
Sbjct: 209 SYGERPYW 216
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRVCR-EKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 366 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 425
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 426 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 484
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 485 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL------KKSEMLR 156
+E+ + + + ++ E IGKG FG V R V A+K L ++EM+
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 157 RGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED 216
+ Q + E +++ ++ IVKLY + ++ME++P GD+ L+ K +
Sbjct: 66 KFQ--EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 217 EARF-YVAETVLAIESIHKHH--YIHRDIKPDNLLLDKYGH-----LRLSDFGLCK 264
+ + + L IE + + +HRD++ N+ L +++DFGL +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 68
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ E + G + + L + D A+F V + V
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVG 122
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 169
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRVCR-EKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 367 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 426
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 427 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 485
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 486 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ E + G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I Y+HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 192 YLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDK 251
+L+ME LPG + +L + + ++ + ++ A+E K + H D++P N+++D
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALE---KKGFWHDDVRPWNVMVDA 374
Query: 252 YGHLRLSDFG--LCKPLDCS---TLQEQDFTIGNNL 282
H RL DFG + P DCS L + F N L
Sbjct: 375 RQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNEL 410
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 107/264 (40%), Gaps = 50/264 (18%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL------KKSEMLR 156
+E+ + + + ++ E IGKG FG V R V A+K L ++EM+
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 157 RGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED 216
+ Q + E +++ ++ IVKLY + ++ME++P GD+ L+ K +
Sbjct: 66 KFQ--EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 217 EARF-YVAETVLAIESIHKHH--YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQE 273
+ + + L IE + + +HRD++ N+ L + +C + +L +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD----ENAPVCAKVADFSLSQ 177
Query: 274 QDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG 333
Q + L G+ Q W +A T+G + +
Sbjct: 178 QSVHSVSGLLGNFQ------------------W------MAPETIGAEE---------ES 204
Query: 334 YGMECDWWSLGAIMYEMLVGYPPF 357
Y + D +S I+Y +L G PF
Sbjct: 205 YTEKADTYSFAMILYTILTGEGPF 228
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 108 LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKK-----SEMLRRGQVEH 162
L+ ++ +D+F ++G+G FG+V R G + A+K+LK+ E+ + +VE
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQFQTEVEM 88
Query: 163 VR--AERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD----TLTED 216
+ RNLL ++ +C + L + Y+ G + + L + L
Sbjct: 89 ISMAVHRNLLR-------LRGFCMTPTERLL--VYPYMANGSVASCLRERPESQPPLDWP 139
Query: 217 EARFYVAETVLAIESIHKH---HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + + +H H IHRD+K N+LLD+ + DFGL K +D
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 111/288 (38%), Gaps = 78/288 (27%)
Query: 79 KKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREK 138
K D + E+ + +F ++ + ++++R +IG G FGEV R K
Sbjct: 18 KTYIDPETYEDPNRAVHQFAKELDASCIKIER------------VIGAGEFGEVCSGRLK 65
Query: 139 TTGH---VYAMKKLKK--SEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYL 193
G A+K LK +E RR + E +++ + D +V L + + +
Sbjct: 66 LPGKRDVAVAIKTLKVGYTEKQRRDFL----CEASIMGQFDHPNVVHLEGVVTRGKPVMI 121
Query: 194 IMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHH-------YIHRDIKPDN 246
++E++ G + L + D +F V + V + I Y+HRD+ N
Sbjct: 122 VIEFMENGALDAFLRKHD------GQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARN 175
Query: 247 LLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHW 306
+L++ ++SDFGL + ++ + P A
Sbjct: 176 ILVNSNLVCKVSDFGLSRVIE----------------------DDPEA------------ 201
Query: 307 QKNRRMLAYSTVG---TPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
Y+T G + APE + + + D WS G +M+E++
Sbjct: 202 -------VYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 104/263 (39%), Gaps = 77/263 (29%)
Query: 124 IGKGAFGEVRVCREKTTGHVY-----------AMKKLK-KSEMLRRGQVEHVRAERNLLA 171
+G+ FG+V GH++ A+K LK K+E R E R E L A
Sbjct: 34 LGEDRFGKV------YKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR---EEFRHEAMLRA 84
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK----DTLTEDEAR-------- 219
+ +V L D+ L +I Y GD+ L+ + D + D+ R
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 220 ----FYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQD 275
VA+ +E + HH +H+D+ N+L+ ++++SD GL + + + +
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK-- 202
Query: 276 FTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYG 335
+GN+L P R ++APE ++ +
Sbjct: 203 -LLGNSL-----------LPIR-------------------------WMAPEAIMYGKFS 225
Query: 336 MECDWWSLGAIMYEML-VGYPPF 357
++ D WS G +++E+ G P+
Sbjct: 226 IDSDIWSYGVVLWEVFSYGLQPY 248
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 104/286 (36%), Gaps = 92/286 (32%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL---------KKSEMLRRGQVEHVRA 165
A D LL +GKG +GEV R G A+K +++E+ + H
Sbjct: 7 ARDITLLECVGKGRYGEV--WRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH--- 61
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
N+L + S+ S L+LI Y G + L T R
Sbjct: 62 -ENILGFIASD-----MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI----- 110
Query: 226 VLAIESIHKHHYI------------HRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQE 273
VL+I S H +I HRD+K N+L+ K G ++D GL ST Q
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ- 169
Query: 274 QDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG 333
+GNN P+ VGT Y+APEV L +
Sbjct: 170 --LDVGNN-------------PR---------------------VGTKRYMAPEV-LDET 192
Query: 334 YGMEC-------DWWSLGAIMYEM---LVG-------YPPFYSDDP 362
++C D W+ G +++E+ +V PPFY P
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRV-CREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 24 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 84 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 143 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRV-CREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 24 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 84 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 143 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 28 SDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 83
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E +A +T
Sbjct: 84 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 142
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----------------------- 179
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSL 343
E+ Q EQL G+ ++APEV+ K Y + D ++
Sbjct: 180 --TEKSRWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 224 GIVLYELMTGQLPY 237
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 55/254 (21%)
Query: 115 ADDFEL----LTM---IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAER 167
+DD+E+ +T+ IG G+FG V + K G V A+K L + + Q++ + E
Sbjct: 20 SDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEV 75
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETV 226
+L + I+ L+ + L ++ ++ G + L +T E +A +T
Sbjct: 76 GVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 134
Query: 227 LAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSS 286
++ +H IHRD+K +N+ L + +++ DFGL
Sbjct: 135 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----------------------- 171
Query: 287 QNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSL 343
E+ Q EQL G+ ++APEV+ K Y + D ++
Sbjct: 172 --TEKSRWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAF 215
Query: 344 GAIMYEMLVGYPPF 357
G ++YE++ G P+
Sbjct: 216 GIVLYELMTGQLPY 229
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 59/224 (26%)
Query: 145 AMKKLK-KSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDM 203
A+K LK K+E R E R E L A + +V L D+ L +I Y GD+
Sbjct: 43 AIKTLKDKAEGPLR---EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 204 MTLLMRK----DTLTEDEAR------------FYVAETVLAIESIHKHHYIHRDIKPDNL 247
L+ + D + D+ R VA+ +E + HH +H+D+ N+
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV 159
Query: 248 LLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQ 307
L+ ++++SD GL + + + + +GN+L P R
Sbjct: 160 LVYDKLNVKISDLGLFREVYAADYYK---LLGNSL-----------LPIR---------- 195
Query: 308 KNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 351
++APE ++ + ++ D WS G +++E+
Sbjct: 196 ---------------WMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 108 LQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKK-----SEMLRRGQVEH 162
L+ ++ +D+F ++G+G FG+V R G + A+K+LK+ E+ + +VE
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQFQTEVEM 80
Query: 163 VR--AERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKD----TLTED 216
+ RNLL ++ +C + L + Y+ G + + L + L
Sbjct: 81 ISMAVHRNLLR-------LRGFCMTPTERLL--VYPYMANGSVASCLRERPESQPPLDWP 131
Query: 217 EARFYVAETVLAIESIHKH---HYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ + + + +H H IHRD+K N+LLD+ + DFGL K +D
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRV-CREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 22 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 81
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 82 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 140
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 141 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRV-CREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 8 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 68 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 127 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRV-CREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 73
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 74 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 132
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 133 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRV-CREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 8 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 68 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 127 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVR-VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 2 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 61
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 62 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 120
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 121 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + + +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + +R++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDI------ 207
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 208 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 232
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 48/238 (20%)
Query: 124 IGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYC 183
IG G+FG V + K G V A+K L + + Q++ + E +L + I+ L+
Sbjct: 16 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 184 SFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVA-ETVLAIESIHKHHYIHRDI 242
+ L ++ ++ G + L +T E +A +T ++ +H IHRD+
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 243 KPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQ 302
K +N+ L + +++ DFGL E+ Q EQ
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA-------------------------TEKSRWSGSHQFEQ 165
Query: 303 LQHWQKNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 357
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 166 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 117 DFELLTM----IGKGAFGEVRV-CREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D +LLT+ +G G FG V+ + K+ K+E + + AE N++
Sbjct: 4 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 63
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIES 231
++D+ IV++ + + ++ L+ME G + L + + + V + + ++
Sbjct: 64 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 122
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ + +++HRD+ N+LL + ++SDFGL K L
Sbjct: 123 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 67/266 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGAT----HSEHRALMSELK 84
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL--------------MRKDT 212
+L + N + L + L +I+E+ G++ T L + KD
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 213 LTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
LT + Y + +E + IHRD+ N+LL + +++ DFGL + +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI------ 198
Query: 273 EQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK 332
+ P ++ W +APE + +
Sbjct: 199 ----------------XKDPDXVRKGDARLPLKW-----------------MAPETIFDR 225
Query: 333 GYGMECDWWSLGAIMYEML-VGYPPF 357
Y ++ D WS G +++E+ +G P+
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 60/269 (22%)
Query: 103 TEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL------KKSEMLR 156
+E+ + + + ++ E IGKG FG V R V A+K L ++EM+
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 157 RGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTED 216
+ Q + E +++ ++ IVKLY + ++ME++P GD+ L+ K +
Sbjct: 66 KFQ--EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 217 EARF-YVAETVLAIESIHKHH--YIHRDIKPDNLLLDKYGH-----LRLSDFGLCKPLDC 268
+ + + L IE + + +HRD++ N+ L +++DFG
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------- 174
Query: 269 STLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEV 328
T Q+ ++ L N + +A T+G +
Sbjct: 175 -TSQQSVHSVSGLLG-------------------------NFQWMAPETIGAEE------ 202
Query: 329 LLKKGYGMECDWWSLGAIMYEMLVGYPPF 357
+ Y + D +S I+Y +L G PF
Sbjct: 203 ---ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 64/266 (24%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + + +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 207
Query: 273 EQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK 332
NN++ + N R+ ++APE L +
Sbjct: 208 -------NNIDXXKKTT-------------------NGRLPV-------KWMAPEALFDR 234
Query: 333 GYGMECDWWSLGAIMYEML-VGYPPF 357
Y + D WS G +M+E+ +G P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 65/264 (24%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGAT----HSEHRALMSELK 82
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL------------MRKDTLT 214
+L + N + L + L +I+E+ G++ T L + KD LT
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 215 EDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQ 274
+ Y + +E + IHRD+ N+LL + +++ DFGL + ++
Sbjct: 143 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR----DIYKDP 198
Query: 275 DFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY 334
D+ R +L ++APE + + Y
Sbjct: 199 DYV-------------------RKGDARLPL----------------KWMAPETIFDRVY 223
Query: 335 GMECDWWSLGAIMYEML-VGYPPF 357
++ D WS G +++E+ +G P+
Sbjct: 224 TIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 74
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 75 VDNPHVCRL-LGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 64/266 (24%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + V +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 207
Query: 273 EQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKK 332
NN++ + N R+ ++APE L +
Sbjct: 208 -------NNIDXXKKTT-------------------NGRLPV-------KWMAPEALFDR 234
Query: 333 GYGMECDWWSLGAIMYEML-VGYPPF 357
Y + D WS G +M+E+ +G P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 63/256 (24%)
Query: 123 MIGKGAFGEV-----------RV-CREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLL 170
+IGKG FG V R+ C K+ + M++++ LR G + N+L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA--FLREGLLMRGLNHPNVL 85
Query: 171 AEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM--RKDTLTEDEARFYVAETVLA 228
A + + ++++ Y+ GD++ + +++ +D F + +
Sbjct: 86 ALIG--------IMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL-QVARG 136
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQN 288
+E + + ++HRD+ N +LD+ ++++DFGL + L + +++ Q+
Sbjct: 137 MEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLAR----DILDREYYSV-------QQH 185
Query: 289 NERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 348
K T E LQ ++ + + D WS G +++
Sbjct: 186 RHARLPVKWTALESLQTYR--------------------------FTTKSDVWSFGVLLW 219
Query: 349 EMLV-GYPPFYSDDPM 363
E+L G PP+ DP
Sbjct: 220 ELLTRGAPPYRHIDPF 235
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 96/264 (36%), Gaps = 64/264 (24%)
Query: 117 DFELLTMIGKGAFGEVRV--CREKTTGH---VYAMKKLKKSEMLRRGQVEHVRAERNLLA 171
D L +G+GAFG+V + C + + A+K LK + R + E LL
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAELLT 72
Query: 172 EVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRKDTLTE 215
+ IVK Y D + L ++ EY+ GD+ L K L
Sbjct: 73 NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 216 DEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQD 275
+ ++ + + H++HRD+ N L+ +++ DFG+ +
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDY 188
Query: 276 FTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYG 335
+ +G + P R ++ PE ++ + +
Sbjct: 189 YRVGGH----------TMLPIR-------------------------WMPPESIMYRKFT 213
Query: 336 MECDWWSLGAIMYEMLV-GYPPFY 358
E D WS G I++E+ G P++
Sbjct: 214 TESDVWSFGVILWEIFTYGKQPWF 237
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 65/264 (24%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGAT----HSEHRALMSELK 82
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL------------MRKDTLT 214
+L + N + L + L +I+E+ G++ T L + KD LT
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 215 EDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQ 274
+ Y + +E + IHRD+ N+LL + +++ DFGL + ++
Sbjct: 143 LEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDP 198
Query: 275 DFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGY 334
D+ R +L ++APE + + Y
Sbjct: 199 DYV-------------------RKGDARLPL----------------KWMAPETIFDRVY 223
Query: 335 GMECDWWSLGAIMYEML-VGYPPF 357
++ D WS G +++E+ +G P+
Sbjct: 224 TIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 111/273 (40%), Gaps = 73/273 (26%)
Query: 116 DDFELLTMIGKGAFGEVR------VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
++ E ++G GAFG+V + + + V A+K LK E + E + +E +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQV-AVKMLK--EKADSSEREALMSELKM 101
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-MRKDTLTEDEARF------- 220
+ ++ S+ IV L + +YLI EY GD++ L +++ +EDE +
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 221 ---------------YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKP 265
+ + +E + +HRD+ N+L+ +++ DFGL +
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 266 LDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIA 325
+ + + ++ + + N R+ ++A
Sbjct: 222 I----MSDSNYVV----------------------------RGNARL-------PVKWMA 242
Query: 326 PEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
PE L + Y ++ D WS G +++E+ +G P+
Sbjct: 243 PESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 106/268 (39%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + + +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 207
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ ++ N P ++APE L
Sbjct: 208 -------NNIDYYKNTTNGRLPVK----------------------------WMAPEALF 232
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 31 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ +++ME + GGD+ + L + +L +
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 191
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 192 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 228
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 229 WSFGVLLWEIFSLGYMPYPS 248
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 118 FELLTMIGKGAFGEVRVC--REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
F L M+GKG FG VR +++ V K+ K++++ +E E + E D
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 176 NCIVKLY-CSFQDDE-----FLYLIMEYLPGGDMMTLLMRK-------DTLTEDEARFYV 222
+ KL S + +I+ ++ GD+ L+ + + RF V
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 223 AETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCK 264
+ +E + ++IHRD+ N +L + + ++DFGL +
Sbjct: 145 -DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 77
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 78 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 171
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTT-GHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEV 173
A +E+ I G G + + ++ G +K L S AER LAEV
Sbjct: 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEV 136
Query: 174 DSNCIVKLYCSFQ-----DDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLA 228
IV+++ + D Y++MEY+ G + + L EA Y+ E + A
Sbjct: 137 VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR--SKGQKLPVAEAIAYLLEILPA 194
Query: 229 IESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFG 261
+ +H ++ D+KP+N++L + L+L D G
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG 226
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 74
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 75 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 46 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ +++ME + GGD+ + L + +L +
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 206
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 207 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 243
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 244 WSFGVLLWEIFSLGYMPYPS 263
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 73
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I+E+ G++ T L + K
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL + +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI---- 189
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
+ P ++ W +APE +
Sbjct: 190 ------------------XKDPDXVRKGDARLPLKW-----------------MAPETIF 214
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 32 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++++ IV+ ++++E + GGD+ + L + +L +
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 192
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 193 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 229
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 230 WSFGVLLWEIFSLGYMPYPS 249
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 103/286 (36%), Gaps = 92/286 (32%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL---------KKSEMLRRGQVEHVRA 165
A LL +GKG +GEV R G A+K +++E+ + H
Sbjct: 7 AHQITLLECVGKGRYGEVW--RGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH--- 61
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
N+L + S+ S L+LI Y G + L T R
Sbjct: 62 -ENILGFIASD-----MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI----- 110
Query: 226 VLAIESIHKHHYI------------HRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQE 273
VL+I S H +I HRD+K N+L+ K G ++D GL ST Q
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ- 169
Query: 274 QDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG 333
+GNN P+ VGT Y+APEV L +
Sbjct: 170 --LDVGNN-------------PR---------------------VGTKRYMAPEV-LDET 192
Query: 334 YGMEC-------DWWSLGAIMYEM---LVG-------YPPFYSDDP 362
++C D W+ G +++E+ +V PPFY P
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 105/268 (39%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + + +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 207
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 208 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 232
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 68/267 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 83
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL---------------MRKD 211
+L + N + L + L +I+E+ G++ T L + KD
Sbjct: 84 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 212 TLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTL 271
LT + Y + +E + IHRD+ N+LL + +++ DFGL + +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI----- 198
Query: 272 QEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK 331
+ P ++ W +APE +
Sbjct: 199 -----------------XKDPDXVRKGDARLPLKW-----------------MAPETIFD 224
Query: 332 KGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 105/268 (39%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + + +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 207
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 208 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 232
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 44/214 (20%)
Query: 191 LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD 250
LYL+ E + + ++ ++ ++++ +L + +H+ +HRD+ P N+LL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 251 KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNR 310
+ + DF L + E A +T H+ +R
Sbjct: 169 DNNDITICDFNLAR-------------------------EDTADANKT------HYVTHR 197
Query: 311 RMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKI 369
Y APE++++ KG+ D WS G +M EM F + KI
Sbjct: 198 W-----------YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246
Query: 370 VNWRTHLKFPEEAKLSI-EAKDLISKLLCNVNQR 402
V K + S A+D + L NV R
Sbjct: 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR 280
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 43/162 (26%)
Query: 191 LYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLD 250
LYL+ E + + ++ ++ ++++ +L + +H+ +HRD+ P N+LL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 251 KYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNR 310
+ + DF L + E A +T H+ +R
Sbjct: 169 DNNDITICDFNLAR-------------------------EDTADANKT------HYVTHR 197
Query: 311 RMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 351
Y APE++++ KG+ D WS G +M EM
Sbjct: 198 W-----------YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 82
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I+E+ G++ T L + K
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL + +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI---- 198
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
+ P ++ W +APE +
Sbjct: 199 ------------------XKDPDXVRKGDARLPLKW-----------------MAPETIF 223
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 73
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I E+ G++ T L + K
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL + +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI---- 189
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
+ P ++ W +APE +
Sbjct: 190 ------------------XKDPDXVRKGDARLPLKW-----------------MAPETIF 214
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 58 NITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 111
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 172 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 218
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 219 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 255
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 256 WSFGVLLWEIFSLGYMPYPS 275
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 32 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAQ 192
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 193 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 229
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 230 WSFGVLLWEIFSLGYMPYPS 249
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 84
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I+E+ G++ T L + K
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL +
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR----DI 200
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
++ D+ +K L ++APE +
Sbjct: 201 YKDPDYV-----------------------------RKGDARLPLK------WMAPETIF 225
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 226 DRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 103/272 (37%), Gaps = 83/272 (30%)
Query: 124 IGKGAFGEVRVCREKTTGHV--------YAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+G+G FG+V + T H+ A+K LK E ++ + +E N+L +V+
Sbjct: 31 LGEGEFGKVV---KATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSEFNVLKQVNH 85
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR------------------------KD 211
++KLY + D L LI+EY G + L +
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 212 TLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTL 271
LT + + + ++ + + +HRD+ N+L+ + +++SDFGL + +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR-----DV 200
Query: 272 QEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK 331
E+D + KR+Q W +A E L
Sbjct: 201 YEEDSXV-----------------KRSQGRIPVKW-----------------MAIESLFD 226
Query: 332 KGYGMECDWWSLGAIMYEMLV-------GYPP 356
Y + D WS G +++E++ G PP
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 32 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 192
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 193 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 229
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 230 WSFGVLLWEIFSLGYMPYPS 249
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 46 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++++ IV+ ++++E + GGD+ + L + +L +
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 206
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 207 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 243
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 244 WSFGVLLWEIFSLGYMPYPS 263
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 82
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I+E+ G++ T L + K
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR----DI 198
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
++ D+ +K L ++APE +
Sbjct: 199 YKDPDYV-----------------------------RKGDARLPLK------WMAPETIF 223
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 48 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 101
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 162 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 208
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 209 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 245
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 246 WSFGVLLWEIFSLGYMPYPS 265
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 103/272 (37%), Gaps = 83/272 (30%)
Query: 124 IGKGAFGEVRVCREKTTGHV--------YAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+G+G FG+V + T H+ A+K LK E ++ + +E N+L +V+
Sbjct: 31 LGEGEFGKVV---KATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSEFNVLKQVNH 85
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR------------------------KD 211
++KLY + D L LI+EY G + L +
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 212 TLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTL 271
LT + + + ++ + + +HRD+ N+L+ + +++SDFGL + +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR-----DV 200
Query: 272 QEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK 331
E+D + KR+Q W +A E L
Sbjct: 201 YEEDSXV-----------------KRSQGRIPVKW-----------------MAIESLFD 226
Query: 332 KGYGMECDWWSLGAIMYEMLV-------GYPP 356
Y + D WS G +++E++ G PP
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 106/286 (37%), Gaps = 92/286 (32%)
Query: 115 ADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKL---------KKSEMLRRGQVEHVRA 165
A LL +GKG +GEV R G A+K +++E+ + H
Sbjct: 36 ARQITLLECVGKGRYGEVW--RGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH--- 90
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET 225
N+L + S+ + + S Q L+LI Y G + L T R
Sbjct: 91 -ENILGFIASD-MTSRHSSTQ----LWLITHYHEMGSLYDYLQLTTLDTVSCLRI----- 139
Query: 226 VLAIESIHKHHYI------------HRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQE 273
VL+I S H +I HRD+K N+L+ K G ++D GL ST Q
Sbjct: 140 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ- 198
Query: 274 QDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKG 333
+GNN P+ VGT Y+APEV L +
Sbjct: 199 --LDVGNN-------------PR---------------------VGTKRYMAPEV-LDET 221
Query: 334 YGMEC-------DWWSLGAIMYEM---LVG-------YPPFYSDDP 362
++C D W+ G +++E+ +V PPFY P
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 38 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 91
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 152 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 198
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 199 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 235
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 236 WSFGVLLWEIFSLGYMPYPS 255
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 119
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I+E+ G++ T L + K
Sbjct: 120 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL +
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR----DI 235
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
++ D+ +K L ++APE +
Sbjct: 236 YKDPDYV-----------------------------RKGDARLPLK------WMAPETIF 260
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 261 DRVYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 112 KMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVR----AER 167
++ A + + ++G G FGEV R K +K L+ G E R E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---LKVGYTEKQRRDFLGEA 97
Query: 168 NLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVL 227
+++ + D I++L + + ++ E + G + + L + D A+F V + V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVG 151
Query: 228 AIESIHKHH-------YIHRDIKPDNLLLDKYGHLRLSDFGLCKPLD 267
+ I +HRD+ N+L++ ++SDFGL + L+
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 116/291 (39%), Gaps = 64/291 (21%)
Query: 86 VSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+ E + N F++ + Y ++ + ++ + +G GAFG+V G A
Sbjct: 18 IIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 75
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEV-------DSNCIVKLYCSFQDDEFLYLIMEYL 198
+ K+ +ML+ H + L++E+ IV L + + +I EY
Sbjct: 76 VLKVA-VKMLK--STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132
Query: 199 PGGDMMTLLMRKDT--LTEDEAR--------FYVAETVLAIESIHKHHYIHRDIKPDNLL 248
GD++ L RK L +++ R + ++ + + + IHRD+ N+L
Sbjct: 133 CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 192
Query: 249 LDKYGHL-RLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQ 307
L GH+ ++ DFGL + I N+ N + N R P +
Sbjct: 193 LTN-GHVAKIGDFGLAR------------DIMNDSNYIVKGNAR--LPVK---------- 227
Query: 308 KNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
++APE + Y ++ D WS G +++E+ +G P+
Sbjct: 228 ---------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 31 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 191
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 192 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 228
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 229 WSFGVLLWEIFSLGYMPYPS 248
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEE-DLSDLVSEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 207
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 208 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 232
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 82
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I+E+ G++ T L + K
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL + +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI---- 198
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
+ P ++ W +APE +
Sbjct: 199 ------------------YKDPDXVRKGDARLPLKW-----------------MAPETIF 223
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 116/291 (39%), Gaps = 64/291 (21%)
Query: 86 VSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+ E + N F++ + Y ++ + ++ + +G GAFG+V G A
Sbjct: 10 IIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 67
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEV-------DSNCIVKLYCSFQDDEFLYLIMEYL 198
+ K+ +ML+ H + L++E+ IV L + + +I EY
Sbjct: 68 VLKVA-VKMLK--STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 124
Query: 199 PGGDMMTLLMRKDT--LTEDEAR--------FYVAETVLAIESIHKHHYIHRDIKPDNLL 248
GD++ L RK L +++ R + ++ + + + IHRD+ N+L
Sbjct: 125 CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 184
Query: 249 LDKYGHL-RLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQ 307
L GH+ ++ DFGL + I N+ N + N R P +
Sbjct: 185 LTN-GHVAKIGDFGLAR------------DIMNDSNYIVKGNAR--LPVK---------- 219
Query: 308 KNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
++APE + Y ++ D WS G +++E+ +G P+
Sbjct: 220 ---------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 46 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEA 99
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 206
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 207 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 243
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 244 WSFGVLLWEIFSLGYMPYPS 263
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 23 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 76
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 137 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 183
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ +S + A ML ++ PE ++ + + D
Sbjct: 184 DIYRASYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 220
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 221 WSFGVLLWEIFSLGYMPYPS 240
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 73
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I E+ G++ T L + K
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL + +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI---- 189
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
++ D+ R +L ++APE +
Sbjct: 190 YKDPDYV-------------------RKGDARLPL----------------KWMAPETIF 214
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 103/272 (37%), Gaps = 83/272 (30%)
Query: 124 IGKGAFGEVRVCREKTTGHV--------YAMKKLKKSEMLRRGQVEHVRAERNLLAEVDS 175
+G+G FG+V + T H+ A+K LK E ++ + +E N+L +V+
Sbjct: 31 LGEGEFGKVV---KATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSEFNVLKQVNH 85
Query: 176 NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMR------------------------KD 211
++KLY + D L LI+EY G + L +
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 212 TLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTL 271
LT + + + ++ + + +HRD+ N+L+ + +++SDFGL + +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR-----DV 200
Query: 272 QEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLK 331
E+D + KR+Q W +A E L
Sbjct: 201 YEEDSYV-----------------KRSQGRIPVKW-----------------MAIESLFD 226
Query: 332 KGYGMECDWWSLGAIMYEMLV-------GYPP 356
Y + D WS G +++E++ G PP
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 115/297 (38%), Gaps = 70/297 (23%)
Query: 86 VSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYA 145
+ E + N F++ + Y ++ + ++ + +G GAFG+V G A
Sbjct: 18 IIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 75
Query: 146 MKKLKKSEMLRRGQVEHVRAERNLLAEV-------DSNCIVKLYCSFQDDEFLYLIMEYL 198
+ K+ +ML+ H + L++E+ IV L + + +I EY
Sbjct: 76 VLKVA-VKMLK--STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132
Query: 199 PGGDMMTLLMRK----------------DTLTEDEARFYVAETVLAIESIHKHHYIHRDI 242
GD++ L RK + L+ + + ++ + + + IHRD+
Sbjct: 133 CYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDV 192
Query: 243 KPDNLLLDKYGHL-RLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQE 301
N+LL GH+ ++ DFGL + I N+ N + N R P +
Sbjct: 193 AARNVLLTN-GHVAKIGDFGLAR------------DIMNDSNYIVKGNAR--LPVK---- 233
Query: 302 QLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
++APE + Y ++ D WS G +++E+ +G P+
Sbjct: 234 ---------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+G FG+V + ++K V K+ K + + + V +E +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SEMEM 139
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 253
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 254 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 278
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 279 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 69/268 (25%)
Query: 116 DDFELLTMIGKGAFGEV----RVCREKT-TGHVYAMKKLKKSEMLRRGQVEH--VRAERN 168
D +L +G+GAFG+V +KT T A+K LK+ EH + +E
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELK 73
Query: 169 LLAEVDS--NCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL----------------MRK 210
+L + N + L + L +I E+ G++ T L + K
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
D LT + Y + +E + IHRD+ N+LL + +++ DFGL + +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI---- 189
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
++ D+ +K L ++APE +
Sbjct: 190 YKDPDYV-----------------------------RKGDARLPLK------WMAPETIF 214
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y ++ D WS G +++E+ +G P+
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 74 VDNPHVCRL-LGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 102/269 (37%), Gaps = 63/269 (23%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRV--CRE---KTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
H + D L +G+GAFG+V + C + + A+K LK++ R + +
Sbjct: 36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQR 92
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL---------------MRK 210
E LL + IV+ + + L ++ EY+ GD+ L +
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
L + ++ + + H++HRD+ N L+ + +++ DFG+ + + +
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
+ +G R P R ++ PE +L
Sbjct: 213 Y----YRVGG----------RTMLPIR-------------------------WMPPESIL 233
Query: 331 KKGYGMECDWWSLGAIMYEMLV-GYPPFY 358
+ + E D WS G +++E+ G P+Y
Sbjct: 234 YRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+G FG+V + ++K V K+ K + + + + +E +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 82
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 196
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 197 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 221
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 222 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+G FG+V + ++K V K+ K + + + + +E +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 80
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDI------ 194
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 195 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 219
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 220 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+G FG+V + ++K V K+ K + + + + +E +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 85
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+EY G++ L + + + E++
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 199
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 200 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 224
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 225 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 113 MGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
M +F + IG G FGE+R+ + T A +K M R H+ E +
Sbjct: 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL--EYRFYKQ 60
Query: 173 VDS-NCIVKLYCSFQDDEFLYLIMEYLPGG--DMMTLLMRKDTLTEDEARFYVAETVLAI 229
+ S + I ++Y ++ +++E L D+ L R T + + + +
Sbjct: 61 LGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDR--TFSLKTVLMIAIQLISRM 118
Query: 230 ESIHKHHYIHRDIKPDNLLLDKYGH-----LRLSDFGLCKP-LDCSTLQEQDFTIGNNLN 283
E +H + I+RD+KP+N L+ + G+ + + DFGL K +D T + + +L
Sbjct: 119 EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLT 178
Query: 284 GSSQ 287
G+++
Sbjct: 179 GTAR 182
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 98
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 99 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + + +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+ Y G++ L + + + E++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 207
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 208 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 232
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 102/269 (37%), Gaps = 63/269 (23%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRV--CRE---KTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
H + D L +G+GAFG+V + C + + A+K LK++ R + +
Sbjct: 13 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQR 69
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL---------------MRK 210
E LL + IV+ + + L ++ EY+ GD+ L +
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 129
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
L + ++ + + H++HRD+ N L+ + +++ DFG+ + + +
Sbjct: 130 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
+ +G R P R ++ PE +L
Sbjct: 190 Y----YRVGG----------RTMLPIR-------------------------WMPPESIL 210
Query: 331 KKGYGMECDWWSLGAIMYEMLV-GYPPFY 358
+ + E D WS G +++E+ G P+Y
Sbjct: 211 YRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 47/185 (25%)
Query: 191 LYLIMEYLPGGDMMTLLMRKDTLTED---EARFYVA-ETVLAIESIHKHHYIHRDIKPDN 246
+ LI +Y+ G++ L D T E R + + +H IHRD+K N
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSIN 169
Query: 247 LLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHW 306
+LLD+ +++DFG+ K K T+ +Q
Sbjct: 170 ILLDENFVPKITDFGISK-------------------------------KGTELDQTH-- 196
Query: 307 QKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTC 366
L GT YI PE +K + D +S G +++E+L P
Sbjct: 197 ------LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP---- 246
Query: 367 RKIVN 371
R++VN
Sbjct: 247 REMVN 251
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 102/269 (37%), Gaps = 63/269 (23%)
Query: 111 HKMGADDFELLTMIGKGAFGEVRV--CRE---KTTGHVYAMKKLKKSEMLRRGQVEHVRA 165
H + D L +G+GAFG+V + C + + A+K LK++ R + +
Sbjct: 7 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQR 63
Query: 166 ERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL---------------MRK 210
E LL + IV+ + + L ++ EY+ GD+ L +
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 123
Query: 211 DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCST 270
L + ++ + + H++HRD+ N L+ + +++ DFG+ + + +
Sbjct: 124 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 271 LQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
+ +G R P R ++ PE +L
Sbjct: 184 Y----YRVGG----------RTMLPIR-------------------------WMPPESIL 204
Query: 331 KKGYGMECDWWSLGAIMYEMLV-GYPPFY 358
+ + E D WS G +++E+ G P+Y
Sbjct: 205 YRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 83
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 84 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 79
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 80 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 80
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 81 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFG K L
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++ GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 80
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 81 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFG K L
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 98/260 (37%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 49 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 102
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 163 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 209
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ + + A ML ++ PE ++ + + D
Sbjct: 210 DIYRAGYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 246
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 247 WSFGVLLWEIFSLGYMPYPS 266
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 98/260 (37%), Gaps = 59/260 (22%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN-------- 168
+ L+ +G GAFGEV G V M + + V +E++
Sbjct: 72 NITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 125
Query: 169 -LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLL-------MRKDTLTEDEARF 220
++++ + IV+ ++++E + GGD+ + L + +L +
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 221 YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
+ + + ++H+IHRDI N LL G R++ G DF +
Sbjct: 186 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG-------------DFGMAR 232
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 340
++ + + A ML ++ PE ++ + + D
Sbjct: 233 DIYRAGYYRKGGCA-----------------MLPVK------WMPPEAFMEGIFTSKTDT 269
Query: 341 WSLGAIMYEML-VGYPPFYS 359
WS G +++E+ +GY P+ S
Sbjct: 270 WSFGVLLWEIFSLGYMPYPS 289
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 68/268 (25%)
Query: 116 DDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNL 169
D L +G+GAFG+V + ++K V K+ K + + + + +E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 170 LAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK-----------DTLTEDE 217
+ + + I+ L + D LY+I+ Y G++ L + + + E++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 218 ARF-----YVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQ 272
F + +E + IHRD+ N+L+ + ++++DFGL + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI------ 207
Query: 273 EQDFTIGNNLN--GSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLL 330
NN++ + N P ++APE L
Sbjct: 208 -------NNIDYYKKTTNGRLPVK----------------------------WMAPEALF 232
Query: 331 KKGYGMECDWWSLGAIMYEML-VGYPPF 357
+ Y + D WS G +M+E+ +G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 77
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LIM+ +P G ++ + KD + + + +
Sbjct: 78 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFG K L
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 171
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 67 LQERRERRNILEKKLADADVSEEDQNN--LLKFLEKKETEYMRLQRHKMGADDFELLTMI 124
+++R RR + E++L + + N LL+ L KETE+ +++ ++
Sbjct: 13 VRKRTLRRLLQERELVEPLTPSGEAPNQALLRIL--KETEFKKIK-------------VL 57
Query: 125 GKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVK 180
G GAFG V + + A+ +L+++ + + + E ++A VD+ + +
Sbjct: 58 GSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK--EILDEAYVMASVDNPHVCR 115
Query: 181 LYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIESIHKHHYIH 239
L + LI + +P G ++ + KD + + + + + +H
Sbjct: 116 LL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 174
Query: 240 RDIKPDNLLLDKYGHLRLSDFGLCKPL 266
RD+ N+L+ H++++DFGL K L
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLL 201
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 67
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 68 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 117 DFELLTMIGKGAFGEVR----VCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAE 172
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 70
Query: 173 VDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLM-RKDTLTEDEARFYVAETVLAIES 231
VD+ + +L + LI + +P G ++ + KD + + + +
Sbjct: 71 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 232 IHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ +HRD+ N+L+ H++++DFGL K L
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 47/185 (25%)
Query: 191 LYLIMEYLPGGDMMTLLMRKDTLTED---EARFYVA-ETVLAIESIHKHHYIHRDIKPDN 246
+ LI +Y+ G++ L D T E R + + +H IHRD+K N
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSIN 169
Query: 247 LLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHW 306
+LLD+ +++DFG+ K K T+ Q
Sbjct: 170 ILLDENFVPKITDFGISK-------------------------------KGTELGQTH-- 196
Query: 307 QKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTC 366
L GT YI PE +K + D +S G +++E+L P
Sbjct: 197 ------LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP---- 246
Query: 367 RKIVN 371
R++VN
Sbjct: 247 REMVN 251
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 94/259 (36%), Gaps = 63/259 (24%)
Query: 116 DDFELLTMIGKGAFGEV-------RVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERN 168
D+ +LL +IG+G +G V R K + + + R +EH R
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 169 LLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAET--- 225
++ + ++ E+L L+MEY P G + L + R + T
Sbjct: 73 IVGDERVTADGRM-------EYL-LVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGL 124
Query: 226 -VLAIESIHKHHY----IHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFTIGN 280
L E HY HRD+ N+L+ G +SDFGL L GN
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL-----------TGN 173
Query: 281 NLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVL-----LKKGYG 335
L RP A S VGT Y+APEVL L+
Sbjct: 174 RL-------VRPGEEDNA---------------AISEVGTIRYMAPEVLEGAVNLRDXES 211
Query: 336 M--ECDWWSLGAIMYEMLV 352
+ D ++LG I +E+ +
Sbjct: 212 ALKQVDMYALGLIYWEIFM 230
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 117 DFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSN 176
+F + IG G FGE+R+ + T A+K + +E+ R + L A +
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY-RFYKQLSA---TE 60
Query: 177 CIVKLYCSFQDDEFLYLIMEYLPGG--DMMTLLMRKDTLTEDEARFYVAETVLAIESIHK 234
+ ++Y ++ +++E L D+ L R T T + + +E +H
Sbjct: 61 GVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDR--TFTLKTVLMIAIQLITRMEYVHT 118
Query: 235 HHYIHRDIKPDNLLLDKYGHLR-----LSDFGLCKP-LDCSTLQEQDFTIGNNLNGSSQ 287
I+RD+KP+N L+ + G R + DFGL K +D T + + +L G+++
Sbjct: 119 KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTAR 177
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 106/272 (38%), Gaps = 64/272 (23%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHV 163
R ++ D L +G+GAFG+V + ++K K+ KS+ + + +
Sbjct: 14 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 72
Query: 164 RAERNLLAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK------------ 210
+E ++ + + I+ L + D LY+I+EY G++ L +
Sbjct: 73 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 132
Query: 211 ----DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ L+ + + +E + IHRD+ N+L+ + ++++DFGL +
Sbjct: 133 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-- 190
Query: 267 DCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAP 326
+ D+ K+T +L ++AP
Sbjct: 191 ---DIHHIDYY------------------KKTTNGRL----------------PVKWMAP 213
Query: 327 EVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
E L + Y + D WS G +++E+ +G P+
Sbjct: 214 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 106/272 (38%), Gaps = 64/272 (23%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHV 163
R ++ D L +G+GAFG+V + ++K K+ KS+ + + +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 80
Query: 164 RAERNLLAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDT---------- 212
+E ++ + + I+ L + D LY+I+EY G++ L ++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPS 140
Query: 213 ------LTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
L+ + + +E + IHRD+ N+L+ + ++++DFGL +
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-- 198
Query: 267 DCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAP 326
+ D+ K+T +L ++AP
Sbjct: 199 ---DIHHIDYY------------------KKTTNGRL----------------PVKWMAP 221
Query: 327 EVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
E L + Y + D WS G +++E+ +G P+
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 106/272 (38%), Gaps = 64/272 (23%)
Query: 110 RHKMGADDFELLTMIGKGAFGEVRVC------REKTTGHVYAMKKLKKSEMLRRGQVEHV 163
R ++ D L +G+GAFG+V + ++K K+ KS+ + + +
Sbjct: 11 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 69
Query: 164 RAERNLLAEVDSN-CIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRK------------ 210
+E ++ + + I+ L + D LY+I+EY G++ L +
Sbjct: 70 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 129
Query: 211 ----DTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDKYGHLRLSDFGLCKPL 266
+ L+ + + +E + IHRD+ N+L+ + ++++DFGL +
Sbjct: 130 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-- 187
Query: 267 DCSTLQEQDFTIGNNLNGSSQNNERPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAP 326
+ D+ K+T +L ++AP
Sbjct: 188 ---DIHHIDYY------------------KKTTNGRL----------------PVKWMAP 210
Query: 327 EVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 357
E L + Y + D WS G +++E+ +G P+
Sbjct: 211 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,656,878
Number of Sequences: 62578
Number of extensions: 694227
Number of successful extensions: 4766
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 1791
Number of HSP's gapped (non-prelim): 2111
length of query: 552
length of database: 14,973,337
effective HSP length: 104
effective length of query: 448
effective length of database: 8,465,225
effective search space: 3792420800
effective search space used: 3792420800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)