Query 008826
Match_columns 552
No_of_seqs 478 out of 2762
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 17:04:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008826.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008826hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 2E-83 4.4E-88 662.7 39.2 422 34-541 8-446 (452)
2 PLN02533 probable purple acid 100.0 5.6E-79 1.2E-83 649.9 48.4 378 72-535 40-421 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 1.3E-46 2.8E-51 384.7 29.4 276 197-532 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 5.4E-32 1.2E-36 280.7 26.1 257 198-536 26-333 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 1E-30 2.2E-35 265.1 24.7 243 199-516 1-274 (277)
6 cd07395 MPP_CSTP1 Homo sapiens 100.0 6.2E-27 1.3E-31 235.7 23.9 204 198-438 4-236 (262)
7 PF09423 PhoD: PhoD-like phosp 99.9 2.1E-24 4.6E-29 233.8 32.2 261 151-416 60-381 (453)
8 cd07402 MPP_GpdQ Enterobacter 99.9 4.4E-23 9.5E-28 204.6 20.5 192 200-439 1-213 (240)
9 cd07396 MPP_Nbla03831 Homo sap 99.9 3.8E-23 8.2E-28 208.8 17.3 197 199-438 1-246 (267)
10 COG3540 PhoD Phosphodiesterase 99.9 9.4E-23 2E-27 210.3 20.1 283 113-413 70-419 (522)
11 KOG2679 Purple (tartrate-resis 99.9 1.5E-22 3.2E-27 195.0 18.7 204 197-438 42-275 (336)
12 PRK11148 cyclic 3',5'-adenosin 99.9 5E-21 1.1E-25 194.2 23.5 191 198-438 14-225 (275)
13 cd07401 MPP_TMEM62_N Homo sapi 99.9 6.4E-21 1.4E-25 191.3 19.8 192 201-418 2-216 (256)
14 cd07399 MPP_YvnB Bacillus subt 99.8 3.6E-19 7.8E-24 174.0 14.7 149 199-416 1-165 (214)
15 cd00842 MPP_ASMase acid sphing 99.8 6.4E-18 1.4E-22 173.2 16.4 191 204-415 43-264 (296)
16 PF00149 Metallophos: Calcineu 99.7 1.4E-17 3.1E-22 152.5 9.3 188 199-412 1-200 (200)
17 cd08163 MPP_Cdc1 Saccharomyces 99.7 1.7E-15 3.6E-20 151.8 17.9 169 214-415 34-231 (257)
18 cd07393 MPP_DR1119 Deinococcus 99.7 9.9E-16 2.2E-20 151.6 14.4 191 201-436 1-226 (232)
19 cd07383 MPP_Dcr2 Saccharomyces 99.7 1.2E-15 2.5E-20 147.4 13.5 150 198-416 2-180 (199)
20 TIGR03729 acc_ester putative p 99.6 2.2E-15 4.8E-20 149.7 14.1 176 200-413 1-222 (239)
21 cd07392 MPP_PAE1087 Pyrobaculu 99.6 6.6E-15 1.4E-19 139.9 15.9 167 201-413 1-174 (188)
22 TIGR03767 P_acnes_RR metalloph 99.6 6.7E-15 1.5E-19 155.6 15.7 94 319-415 290-395 (496)
23 COG1409 Icc Predicted phosphoh 99.6 3.3E-14 7.2E-19 144.5 15.9 179 199-412 1-193 (301)
24 cd07400 MPP_YydB Bacillus subt 99.5 8.9E-14 1.9E-18 126.9 13.4 132 201-435 1-144 (144)
25 PF14008 Metallophos_C: Iron/z 99.5 1.6E-14 3.5E-19 112.5 6.5 43 484-528 20-62 (62)
26 cd07385 MPP_YkuE_C Bacillus su 99.5 1.3E-13 2.8E-18 135.1 14.1 187 198-438 1-206 (223)
27 cd07404 MPP_MS158 Microscilla 99.5 1.4E-13 3.1E-18 128.9 10.5 144 201-414 1-151 (166)
28 PRK11340 phosphodiesterase Yae 99.5 9.3E-13 2E-17 133.4 16.2 164 198-418 49-220 (271)
29 cd07388 MPP_Tt1561 Thermus the 99.5 2.9E-12 6.4E-17 125.4 18.6 169 198-410 4-189 (224)
30 cd00840 MPP_Mre11_N Mre11 nucl 99.5 6.4E-13 1.4E-17 129.8 13.7 185 200-415 1-204 (223)
31 KOG1432 Predicted DNA repair e 99.4 1.8E-11 4E-16 122.7 21.7 256 197-533 52-377 (379)
32 TIGR03768 RPA4764 metallophosp 99.4 4.5E-12 9.7E-17 133.0 16.0 93 319-412 291-411 (492)
33 cd00838 MPP_superfamily metall 99.3 2.3E-11 5E-16 107.1 12.0 116 202-416 1-119 (131)
34 cd07389 MPP_PhoD Bacillus subt 99.3 1.2E-10 2.5E-15 114.8 15.2 178 200-415 1-207 (228)
35 cd07397 MPP_DevT Myxococcus xa 99.2 5.9E-10 1.3E-14 109.6 17.0 195 199-434 1-232 (238)
36 cd07379 MPP_239FB Homo sapiens 99.2 1.7E-10 3.8E-15 104.3 11.7 117 200-413 1-117 (135)
37 PF12850 Metallophos_2: Calcin 99.2 2.6E-10 5.7E-15 104.8 12.8 138 199-438 1-139 (156)
38 COG1408 Predicted phosphohydro 99.1 5.5E-10 1.2E-14 113.3 13.2 76 197-296 43-121 (284)
39 PRK05340 UDP-2,3-diacylglucosa 99.1 1.6E-09 3.4E-14 108.0 13.5 197 199-437 1-220 (241)
40 cd08166 MPP_Cdc1_like_1 unchar 98.9 5.2E-09 1.1E-13 99.9 11.1 110 220-415 38-150 (195)
41 KOG3770 Acid sphingomyelinase 98.9 1.8E-08 3.9E-13 108.5 15.2 180 214-415 198-407 (577)
42 cd00841 MPP_YfcE Escherichia c 98.9 8E-09 1.7E-13 95.4 11.0 56 366-438 77-132 (155)
43 cd08165 MPP_MPPE1 human MPPE1 98.9 6.3E-09 1.4E-13 96.7 10.1 52 221-293 35-89 (156)
44 TIGR00040 yfcE phosphoesterase 98.9 2.6E-08 5.7E-13 92.5 12.8 61 199-292 1-63 (158)
45 cd07394 MPP_Vps29 Homo sapiens 98.9 2.8E-07 6.1E-12 87.5 20.0 40 391-438 97-136 (178)
46 cd07403 MPP_TTHA0053 Thermus t 98.9 1.5E-08 3.3E-13 91.0 10.4 49 366-415 58-106 (129)
47 cd07384 MPP_Cdc1_like Saccharo 98.8 3.7E-08 8E-13 92.9 12.4 32 367-416 119-150 (171)
48 PF14582 Metallophos_3: Metall 98.8 4.3E-08 9.4E-13 93.9 12.7 194 198-413 5-219 (255)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 1E-07 2.3E-12 94.3 15.6 73 202-293 2-81 (231)
50 COG2129 Predicted phosphoester 98.8 1.6E-07 3.4E-12 90.3 14.4 191 198-435 3-203 (226)
51 cd00845 MPP_UshA_N_like Escher 98.7 1.3E-07 2.8E-12 94.5 12.7 192 199-437 1-225 (252)
52 PRK09453 phosphodiesterase; Pr 98.7 6.8E-07 1.5E-11 85.1 17.0 75 199-293 1-76 (182)
53 cd07398 MPP_YbbF-LpxH Escheric 98.7 1.5E-07 3.2E-12 91.7 12.5 197 202-435 1-216 (217)
54 TIGR00583 mre11 DNA repair pro 98.7 9.1E-07 2E-11 94.1 19.1 40 198-237 3-55 (405)
55 COG1768 Predicted phosphohydro 98.7 4.4E-07 9.5E-12 83.6 13.1 63 362-435 157-219 (230)
56 cd07410 MPP_CpdB_N Escherichia 98.6 1.1E-06 2.4E-11 89.3 16.1 188 199-413 1-231 (277)
57 cd07406 MPP_CG11883_N Drosophi 98.6 9E-07 1.9E-11 89.0 14.3 194 199-441 1-228 (257)
58 cd08164 MPP_Ted1 Saccharomyces 98.6 1.6E-07 3.4E-12 89.6 7.9 32 367-416 129-160 (193)
59 COG0420 SbcD DNA repair exonuc 98.5 8.9E-07 1.9E-11 94.5 11.1 75 199-295 1-90 (390)
60 cd07411 MPP_SoxB_N Thermus the 98.4 4.2E-06 9E-11 84.5 14.2 177 215-438 40-240 (264)
61 cd07408 MPP_SA0022_N Staphyloc 98.4 4.9E-06 1.1E-10 83.7 13.4 182 199-414 1-215 (257)
62 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.3 1.4E-05 3.1E-10 80.3 15.3 188 201-417 1-234 (262)
63 cd07412 MPP_YhcR_N Bacillus su 98.3 1.3E-05 2.9E-10 82.0 14.9 84 349-439 178-263 (288)
64 cd07382 MPP_DR1281 Deinococcus 98.3 2.8E-05 6.1E-10 77.8 16.4 191 200-440 1-202 (255)
65 COG2908 Uncharacterized protei 98.3 3.7E-06 8.1E-11 81.7 9.4 190 203-437 2-216 (237)
66 TIGR00282 metallophosphoestera 98.3 5.5E-05 1.2E-09 76.1 18.0 194 199-441 1-206 (266)
67 cd07407 MPP_YHR202W_N Saccharo 98.3 6.4E-05 1.4E-09 76.6 18.6 203 198-441 5-253 (282)
68 COG0622 Predicted phosphoester 98.2 3.1E-05 6.6E-10 72.9 12.7 38 199-236 2-40 (172)
69 PRK04036 DNA polymerase II sma 98.1 2E-05 4.3E-10 86.7 13.0 202 197-436 242-468 (504)
70 cd07409 MPP_CD73_N CD73 ecto-5 98.1 2.9E-05 6.3E-10 79.2 13.1 174 199-413 1-219 (281)
71 PRK09419 bifunctional 2',3'-cy 98.1 7.3E-05 1.6E-09 90.4 18.4 184 197-413 659-883 (1163)
72 cd07386 MPP_DNA_pol_II_small_a 98.1 7.5E-05 1.6E-09 74.4 14.6 197 202-436 2-219 (243)
73 TIGR00619 sbcd exonuclease Sbc 98.1 1E-05 2.3E-10 81.1 8.5 73 199-293 1-88 (253)
74 cd07424 MPP_PrpA_PrpB PrpA and 98.0 9.6E-06 2.1E-10 78.8 7.0 37 200-236 2-40 (207)
75 KOG3662 Cell division control 98.0 4.8E-05 1E-09 79.8 12.0 111 198-339 48-182 (410)
76 cd07425 MPP_Shelphs Shewanella 97.9 2.3E-05 5.1E-10 76.3 7.9 24 391-414 158-181 (208)
77 cd07405 MPP_UshA_N Escherichia 97.9 0.00021 4.5E-09 73.1 14.8 187 199-413 1-222 (285)
78 PHA02546 47 endonuclease subun 97.9 2.9E-05 6.4E-10 81.3 8.6 74 199-293 1-89 (340)
79 PRK10966 exonuclease subunit S 97.9 3.3E-05 7E-10 82.8 9.0 73 199-293 1-87 (407)
80 cd07390 MPP_AQ1575 Aquifex aeo 97.9 3.1E-05 6.7E-10 72.7 7.3 63 202-293 2-82 (168)
81 PRK11439 pphA serine/threonine 97.8 3.2E-05 6.9E-10 75.9 5.4 37 200-236 18-56 (218)
82 COG0737 UshA 5'-nucleotidase/2 97.7 0.00056 1.2E-08 75.8 15.5 185 197-412 25-247 (517)
83 TIGR01530 nadN NAD pyrophospha 97.6 0.00085 1.8E-08 74.9 15.0 113 284-413 85-219 (550)
84 PRK09558 ushA bifunctional UDP 97.6 0.00085 1.8E-08 75.0 14.2 185 197-412 33-257 (551)
85 cd08162 MPP_PhoA_N Synechococc 97.5 0.0012 2.5E-08 68.5 13.2 38 199-236 1-50 (313)
86 cd07380 MPP_CWF19_N Schizosacc 97.5 0.00031 6.7E-09 64.7 7.7 52 366-418 71-128 (150)
87 cd07391 MPP_PF1019 Pyrococcus 97.5 0.00024 5.2E-09 67.0 6.4 70 202-293 1-88 (172)
88 KOG2863 RNA lariat debranching 97.4 0.0015 3.3E-08 66.6 11.8 183 199-411 1-229 (456)
89 PRK11907 bifunctional 2',3'-cy 97.3 0.0069 1.5E-07 69.9 17.1 59 349-412 296-354 (814)
90 PRK09419 bifunctional 2',3'-cy 97.2 0.005 1.1E-07 74.7 15.1 48 361-413 233-281 (1163)
91 PRK09418 bifunctional 2',3'-cy 97.2 0.012 2.5E-07 67.9 16.8 41 197-237 38-96 (780)
92 COG4186 Predicted phosphoester 97.1 0.0075 1.6E-07 54.9 11.7 38 366-411 110-147 (186)
93 PHA02239 putative protein phos 97.1 0.0013 2.8E-08 65.2 7.3 70 199-293 1-73 (235)
94 TIGR00024 SbcD_rel_arch putati 97.0 0.0018 3.8E-08 63.9 7.5 70 199-293 15-102 (225)
95 PRK00166 apaH diadenosine tetr 97.0 0.001 2.2E-08 67.5 5.9 67 199-293 1-69 (275)
96 cd07423 MPP_PrpE Bacillus subt 96.9 0.002 4.3E-08 63.9 6.9 68 200-293 2-80 (234)
97 PRK09420 cpdB bifunctional 2', 96.8 0.029 6.2E-07 63.9 15.6 41 197-237 24-82 (649)
98 COG1311 HYS2 Archaeal DNA poly 96.8 0.027 5.9E-07 60.2 14.2 90 197-296 224-324 (481)
99 cd07387 MPP_PolD2_C PolD2 (DNA 96.8 0.02 4.3E-07 57.5 12.6 192 201-415 2-218 (257)
100 PRK13625 bis(5'-nucleosyl)-tet 96.7 0.0046 9.9E-08 61.8 7.2 69 199-293 1-79 (245)
101 TIGR01390 CycNucDiestase 2',3' 96.6 0.036 7.8E-07 62.9 14.9 46 361-412 194-240 (626)
102 COG5555 Cytolysin, a secreted 96.3 0.0075 1.6E-07 59.9 6.1 140 276-416 166-338 (392)
103 PRK09968 serine/threonine-spec 96.2 0.0082 1.8E-07 58.9 5.9 37 200-236 16-54 (218)
104 cd07413 MPP_PA3087 Pseudomonas 96.1 0.009 1.9E-07 58.8 5.8 66 202-293 2-76 (222)
105 COG1692 Calcineurin-like phosp 96.1 0.18 4E-06 49.5 14.3 193 199-438 1-202 (266)
106 cd07422 MPP_ApaH Escherichia c 96.0 0.011 2.3E-07 59.5 5.8 64 202-293 2-67 (257)
107 PF13277 YmdB: YmdB-like prote 95.9 0.096 2.1E-06 52.0 11.8 189 202-440 1-200 (253)
108 cd00144 MPP_PPP_family phospho 95.9 0.012 2.7E-07 57.4 5.5 65 203-293 2-68 (225)
109 PF00041 fn3: Fibronectin type 95.9 0.036 7.7E-07 44.6 7.3 76 75-176 2-77 (85)
110 cd07381 MPP_CapA CapA and rela 95.9 0.13 2.8E-06 51.0 12.7 135 271-415 70-222 (239)
111 COG1407 Predicted ICC-like pho 95.7 0.028 6E-07 55.3 6.8 73 199-293 20-110 (235)
112 TIGR00668 apaH bis(5'-nucleosy 95.6 0.022 4.7E-07 57.7 5.9 37 200-236 2-40 (279)
113 cd07421 MPP_Rhilphs Rhilph pho 95.5 0.029 6.4E-07 57.0 6.4 37 200-236 3-46 (304)
114 smart00854 PGA_cap Bacterial c 95.5 0.27 5.9E-06 48.8 13.3 136 270-415 65-220 (239)
115 KOG2310 DNA repair exonuclease 94.2 0.11 2.5E-06 56.0 6.9 42 197-238 12-66 (646)
116 cd07416 MPP_PP2B PP2B, metallo 93.6 0.13 2.7E-06 53.2 6.0 22 389-410 222-243 (305)
117 PF09587 PGA_cap: Bacterial ca 93.5 1.2 2.5E-05 44.6 12.5 129 279-415 74-231 (250)
118 smart00156 PP2Ac Protein phosp 93.2 0.17 3.7E-06 51.4 6.1 37 200-236 29-66 (271)
119 KOG4419 5' nucleotidase [Nucle 93.2 0.85 1.8E-05 50.2 11.6 58 344-412 210-269 (602)
120 cd07420 MPP_RdgC Drosophila me 92.9 0.24 5.1E-06 51.4 6.7 23 389-411 253-275 (321)
121 cd07415 MPP_PP2A_PP4_PP6 PP2A, 92.3 0.22 4.8E-06 50.9 5.5 23 389-411 214-236 (285)
122 cd07414 MPP_PP1_PPKL PP1, PPKL 92.1 0.21 4.6E-06 51.2 5.1 23 389-411 222-244 (293)
123 PTZ00239 serine/threonine prot 91.7 0.31 6.6E-06 50.3 5.7 23 389-411 215-237 (303)
124 PTZ00480 serine/threonine-prot 91.1 0.32 6.9E-06 50.4 5.2 23 389-411 231-253 (320)
125 cd07418 MPP_PP7 PP7, metalloph 90.9 0.45 9.9E-06 50.3 6.1 21 389-409 273-293 (377)
126 PTZ00244 serine/threonine-prot 89.6 0.52 1.1E-05 48.4 5.1 23 389-411 224-246 (294)
127 KOG3325 Membrane coat complex 89.5 3.4 7.3E-05 37.7 9.4 39 390-436 97-135 (183)
128 cd07419 MPP_Bsu1_C Arabidopsis 88.4 1.1 2.3E-05 46.5 6.5 21 389-409 242-262 (311)
129 cd07417 MPP_PP5_C PP5, C-termi 88.0 0.92 2E-05 47.1 5.7 23 389-411 233-255 (316)
130 KOG4221 Receptor mediating net 87.2 2.1 4.5E-05 50.8 8.4 97 71-191 614-713 (1381)
131 KOG0196 Tyrosine kinase, EPH ( 86.5 4.7 0.0001 46.2 10.4 38 154-191 497-537 (996)
132 cd00063 FN3 Fibronectin type 3 86.3 5.9 0.00013 30.8 8.6 23 154-176 56-78 (93)
133 KOG3947 Phosphoesterases [Gene 84.5 13 0.00028 37.5 11.2 33 198-235 61-93 (305)
134 PF04042 DNA_pol_E_B: DNA poly 83.5 1 2.2E-05 43.5 3.2 82 201-295 1-93 (209)
135 smart00060 FN3 Fibronectin typ 80.2 9.9 0.00021 28.5 7.4 23 154-176 56-78 (83)
136 KOG4258 Insulin/growth factor 69.5 21 0.00046 41.2 8.9 123 74-208 487-624 (1025)
137 KOG3513 Neural cell adhesion m 69.0 33 0.00071 41.0 10.5 92 75-191 822-916 (1051)
138 KOG4221 Receptor mediating net 67.4 57 0.0012 39.5 11.9 37 154-190 573-612 (1381)
139 PTZ00235 DNA polymerase epsilo 64.8 46 0.001 34.0 9.5 80 198-293 27-122 (291)
140 KOG0372 Serine/threonine speci 44.0 48 0.001 33.0 5.4 34 201-236 45-81 (303)
141 PF07353 Uroplakin_II: Uroplak 43.6 26 0.00056 32.3 3.3 38 155-192 102-141 (184)
142 KOG0374 Serine/threonine speci 36.8 34 0.00074 35.8 3.5 22 389-410 233-254 (331)
143 COG4856 Uncharacterized protei 36.0 1E+02 0.0023 32.5 6.7 74 4-94 3-86 (403)
144 KOG0371 Serine/threonine prote 35.2 67 0.0014 32.3 4.9 34 201-236 62-98 (319)
145 PF01108 Tissue_fac: Tissue fa 30.9 2.2E+02 0.0048 24.0 7.1 75 75-176 24-100 (107)
146 cd02852 Isoamylase_N_term Isoa 30.5 60 0.0013 28.2 3.6 23 152-174 48-70 (119)
147 cd02856 Glycogen_debranching_e 29.1 68 0.0015 27.1 3.6 23 152-174 44-66 (103)
148 cd02860 Pullulanase_N_term Pul 26.7 74 0.0016 26.6 3.4 24 152-175 46-69 (100)
149 PRK10301 hypothetical protein; 26.4 4.5E+02 0.0098 23.2 11.1 35 153-187 86-122 (124)
150 cd02853 MTHase_N_term Maltooli 26.3 77 0.0017 25.7 3.3 21 153-174 40-60 (85)
151 PF09294 Interfer-bind: Interf 25.9 65 0.0014 26.9 2.9 20 155-174 67-86 (106)
152 KOG3513 Neural cell adhesion m 25.3 3.1E+02 0.0066 33.2 8.9 76 74-176 616-695 (1051)
153 COG4037 Predicted membrane pro 25.2 1.2E+02 0.0026 27.1 4.2 69 10-81 19-93 (163)
154 COG2248 Predicted hydrolase (m 24.6 2.2E+02 0.0048 28.6 6.5 75 198-293 176-250 (304)
155 COG3065 Slp Starvation-inducib 22.8 54 0.0012 30.9 1.8 30 10-42 4-34 (191)
156 KOG0373 Serine/threonine speci 21.8 1.9E+02 0.0041 28.4 5.3 34 201-236 48-84 (306)
157 PRK09968 serine/threonine-spec 21.1 81 0.0018 30.7 2.8 29 399-435 178-206 (218)
158 PF10179 DUF2369: Uncharacteri 20.9 96 0.0021 32.0 3.4 20 157-176 262-281 (300)
159 KOG2476 Uncharacterized conser 20.9 2E+02 0.0044 31.3 5.8 37 198-236 5-46 (528)
160 PF02402 Lysis_col: Lysis prot 20.1 76 0.0016 22.8 1.7 19 11-29 1-19 (46)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-83 Score=662.72 Aligned_cols=422 Identities=39% Similarity=0.641 Sum_probs=363.6
Q ss_pred CCCCccCCCCCccccccccCCCCCCCCCCCCCcccccCCCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCC
Q 008826 34 IPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTV 113 (552)
Q Consensus 34 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~ 113 (552)
.+....|+..+..++++++++-....++...|++. +.||||||++++..++|+|+|.|.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~peQvhlS~~~~~~~m~VswvT~~~~------------- 69 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVV-----NSPEQVHLSFTDNLNEMRVSWVTGDGE------------- 69 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcccC-----CCCCeEEEeccCCCCcEEEEEeCCCCC-------------
Confidence 35556688888999999998888888777777554 569999999999888999999998753
Q ss_pred ccEEEEecCCCCCceE-EEEEEEEeeeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCC
Q 008826 114 ASFVRYGTSRTNLNHE-ATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPAS 192 (552)
Q Consensus 114 ~~~V~yg~~~~~~~~~-a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~ 192 (552)
.++|+||+.+...... +.+.+..+...+.. -+|++|++|+|+|++|+|+|+||||||++. .||++|+|+|+|.
T Consensus 70 ~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~---~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~--~wS~~f~F~t~p~- 143 (452)
T KOG1378|consen 70 ENVVRYGEVKDKLDNSAARGMTEAWTDGYAN---GWRDSGYIHDAVMKNLEPNTRYYYQVGSDL--KWSEIFSFKTPPG- 143 (452)
T ss_pred CceEEEeecCCCccccccccceEEEeccccc---ccceeeeEeeeeecCCCCCceEEEEeCCCC--CcccceEeECCCC-
Confidence 3799999877664322 35666655554432 247899999999999999999999999987 6999999999982
Q ss_pred CCCCCceEEEEEeCCCCCCChHHHHHHHHhCC-CCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHH
Q 008826 193 GPQSYPKRIAIVGDLGLTYNTTCTINHMSSNE-PDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (552)
Q Consensus 193 ~~~~~~~rfavigD~~~~~~~~~~l~~l~~~~-pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~ 271 (552)
...+.+|+++||+|.+.....++....++. +|+|||+|||+|++.+.+ .+||+|+
T Consensus 144 --~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n----------------------~~wD~f~ 199 (452)
T KOG1378|consen 144 --QDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSN----------------------WQWDEFG 199 (452)
T ss_pred --ccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCc----------------------cchHHHH
Confidence 224899999999999877767777777654 999999999999874410 5899999
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC--CCcHHHHH
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--DKSGHQYK 349 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~--~~~~~Q~~ 349 (552)
++++++++.+|+|++.||||++..... .|..|.+||.||.+++++..++||||++|++|||+|+|+.++ ....+|++
T Consensus 200 r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~ 278 (452)
T KOG1378|consen 200 RQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQ 278 (452)
T ss_pred hhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHH
Confidence 999999999999999999999865443 799999999999998888889999999999999999999875 35789999
Q ss_pred HHHHHHhcccCCCCCEEEEEcCCCcccCCCC-CCchhH--HHHHHHHHHHHHcCCcEEEEccccCceeeeecccccc---
Q 008826 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSS-HYREAE--CMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL--- 423 (552)
Q Consensus 350 WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~-~~~~~~--~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~--- 423 (552)
||+++|++++|+++||+||+.|+|||++... ++++.+ .+|..||+||.+++||+||+||+|+|||++|++|.++
T Consensus 279 WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~ 358 (452)
T KOG1378|consen 279 WLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTG 358 (452)
T ss_pred HHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeecc
Confidence 9999999999877999999999999999865 666655 8899999999999999999999999999999999887
Q ss_pred -------CCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCC
Q 008826 424 -------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESS 496 (552)
Q Consensus 424 -------~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~ 496 (552)
+++|++||++|+||+.|+.+.. + .+||+|||||+.+
T Consensus 359 ~~~~~~~d~~aPvyI~~G~~G~~e~~~~~--------------------------~-----------~~~p~~Sa~R~~d 401 (452)
T KOG1378|consen 359 WGPVHLVDGMAPIYITVGDGGNHEHLDPF--------------------------S-----------SPQPEWSAFREGD 401 (452)
T ss_pred CCcccccCCCCCEEEEEccCCcccccCcc--------------------------c-----------CCCCccccccccc
Confidence 8899999999999999886531 1 2689999999999
Q ss_pred ceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeCCCCCCCCC
Q 008826 497 FGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPFHG 541 (552)
Q Consensus 497 ~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~~~~~~~~~ 541 (552)
|||++|+++|.||+.|+|+|++|.++.+.|+|||+|+...|....
T Consensus 402 fG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~ 446 (452)
T KOG1378|consen 402 FGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGV 446 (452)
T ss_pred CCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCcccccc
Confidence 999999999999999999999998889999999999988765443
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=5.6e-79 Score=649.91 Aligned_cols=378 Identities=45% Similarity=0.822 Sum_probs=330.2
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccccc
Q 008826 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
+...|+||||++++ +++|+|+|.|.+. ..+.|+||++.+.+..+|.|++.+|+.. ..|++
T Consensus 40 ~~~~P~qvhls~~~-~~~m~V~W~T~~~-------------~~~~V~yG~~~~~l~~~a~g~~~~~~~~------~~~~~ 99 (427)
T PLN02533 40 DPTHPDQVHISLVG-PDKMRISWITQDS-------------IPPSVVYGTVSGKYEGSANGTSSSYHYL------LIYRS 99 (427)
T ss_pred CCCCCceEEEEEcC-CCeEEEEEECCCC-------------CCCEEEEecCCCCCcceEEEEEEEEecc------ccccC
Confidence 34689999999997 8999999999864 2478999999999999999998888631 24678
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEc
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLV 231 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~~~~~~~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~ 231 (552)
+++|+|+|+||+|+|+|+|||+.. .+|++++|+|+|.. .++||+++||+|.......+++++.+.+|||||++
T Consensus 100 g~iH~v~l~~L~p~T~Y~Yrvg~~---~~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 100 GQINDVVIGPLKPNTVYYYKCGGP---SSTQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred CeEEEEEeCCCCCCCEEEEEECCC---CCccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 999999999999999999999965 46899999998853 37999999999977666678999988999999999
Q ss_pred CCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccc--cCcchHHhhhhcC
Q 008826 232 GDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFA 309 (552)
Q Consensus 232 GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~--~~~~f~~y~~~f~ 309 (552)
||++|++. |+.+|+.|.+.++++.+.+|+|+++||||..... ....|..|..+|.
T Consensus 173 GDl~y~~~-----------------------~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~ 229 (427)
T PLN02533 173 GDLSYANF-----------------------YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWR 229 (427)
T ss_pred Cccccccc-----------------------hHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhccc
Confidence 99998642 3578999999999999999999999999986432 2356788999999
Q ss_pred CCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch--hHH
Q 008826 310 FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AEC 387 (552)
Q Consensus 310 ~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~--~~~ 387 (552)
||..+.+...+.||||++|++|||+||++.++....+|++||+++|++++++++||+||++|+|+|++...+..+ ...
T Consensus 230 mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~ 309 (427)
T PLN02533 230 MPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVG 309 (427)
T ss_pred CCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHH
Confidence 998776677889999999999999999998888889999999999999988889999999999999876544322 245
Q ss_pred HHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcc
Q 008826 388 MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGF 467 (552)
Q Consensus 388 ~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 467 (552)
+|+.|++||.+++||++|+||+|.|||++|+++++++++|++||++|+||+.|++...
T Consensus 310 ~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~---------------------- 367 (427)
T PLN02533 310 MKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATK---------------------- 367 (427)
T ss_pred HHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccc----------------------
Confidence 7889999999999999999999999999999999999999999999999998875321
Q ss_pred cccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeCCC
Q 008826 468 CATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPD 535 (552)
Q Consensus 468 ~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~~~ 535 (552)
| +.++|+||+||+.+|||++|+|+|+|||+|+|++++|+++.|.|+|||.|...
T Consensus 368 -------------~-~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~ 421 (427)
T PLN02533 368 -------------Y-IDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLT 421 (427)
T ss_pred -------------c-CCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccC
Confidence 1 14688999999999999999999999999999999988778999999999855
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=1.3e-46 Score=384.70 Aligned_cols=276 Identities=44% Similarity=0.770 Sum_probs=222.1
Q ss_pred CceEEEEEeCCCCC-CChHHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHH
Q 008826 197 YPKRIAIVGDLGLT-YNTTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (552)
Q Consensus 197 ~~~rfavigD~~~~-~~~~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~ 273 (552)
.++||+++||+|.. .....+++++.+ .+|||||++||++|++... .+.+|+.|++.
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~---------------------~~~~~~~~~~~ 61 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN---------------------NGSRWDTFMRQ 61 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc---------------------cchhHHHHHHH
Confidence 37999999999973 456778888887 7899999999999864210 12579999999
Q ss_pred HHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC---CCcHHHHHH
Q 008826 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY---DKSGHQYKW 350 (552)
Q Consensus 274 l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~---~~~~~Q~~W 350 (552)
++++.+.+|+++++||||............+..++.++........+.||+|++|++|||+||++... ....+|++|
T Consensus 62 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 62 IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999999999999997543322111111123344433344568899999999999999998665 568999999
Q ss_pred HHHHHhcccCCCCCEEEEEcCCCcccCCCCCCc--hhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc------
Q 008826 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT------ 422 (552)
Q Consensus 351 L~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~------ 422 (552)
|+++|+++++.+++|+||++|+|+|+....... .....++.|++||++|+|+++|+||+|.|+|++|+++++
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~ 221 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccc
Confidence 999999987667799999999999987544332 245678999999999999999999999999999998865
Q ss_pred --cCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCCceEE
Q 008826 423 --LDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHG 500 (552)
Q Consensus 423 --~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~ 500 (552)
.+++|++||++|+||+.++..... ...++|++++...+||+
T Consensus 222 ~~~~~~g~~yiv~G~~G~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~g~~ 264 (294)
T cd00839 222 PYSNPKGPVHIVIGAGGNDEGLDPFS-------------------------------------APPPAWSAFRESDYGFG 264 (294)
T ss_pred cccCCCccEEEEECCCccccCcCccc-------------------------------------CCCCCceEEEeccCCEE
Confidence 367899999999999976532100 12357999999999999
Q ss_pred EEEEecCCcEEEEEEEecCCCceeeEEEEEEe
Q 008826 501 ILEVKNETWALWTWHRNQDSNNKVGDQIYIVR 532 (552)
Q Consensus 501 ~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k 532 (552)
+|+|.|+|+|.|+|+++.+| +|+|+|+|+|
T Consensus 265 ~~~~~~~t~l~~~~~~~~~g--~v~D~f~i~k 294 (294)
T cd00839 265 RLTVHNSTHLHFEWIRNDDG--VVIDSFWIIK 294 (294)
T ss_pred EEEEEecCeEEEEEEECCCC--eEEEEEEEeC
Confidence 99999999999999999888 9999999986
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=5.4e-32 Score=280.67 Aligned_cols=257 Identities=19% Similarity=0.288 Sum_probs=187.6
Q ss_pred ceEEEEEeCCCCCCChHHHHHHHH-----hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH-HH
Q 008826 198 PKRIAIVGDLGLTYNTTCTINHMS-----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY-WG 271 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~l~~l~-----~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~-~~ 271 (552)
.++|+++||+|.+...+..+++.+ +.++||||.+||+. .++.. + ...++|.. |.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~--s-----------------v~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVD--G-----------------LNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCC--C-----------------ccchhHHhhHh
Confidence 689999999997655454433322 46899999999998 43321 1 12366765 44
Q ss_pred HHHHHhh--hcCCeEEecCCchhcccccCcc--hH------------H------hhhhcCCCCCCCCCCCcceEEE----
Q 008826 272 RFMQNLV--SKVPIMVVEGNHEIEAQAGNQT--FV------------A------YSSRFAFPSEESGSLSSFYYSF---- 325 (552)
Q Consensus 272 ~~l~~l~--~~iP~~~v~GNHD~~~~~~~~~--f~------------~------y~~~f~~P~~~~~~~~~~yYsf---- 325 (552)
+...... .++||++|+||||+..+...+. +. . ...||.||. .||.+
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f 157 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHF 157 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeee
Confidence 5554444 6899999999999975543221 10 1 125777774 57754
Q ss_pred Ec-------------CeEEEEEeccccc-----C-CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhH
Q 008826 326 NA-------------GGIHFIMLGAYIS-----Y-DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAE 386 (552)
Q Consensus 326 ~~-------------G~v~fI~Ldt~~~-----~-~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~ 386 (552)
.. ..+.||+|||... + .....|++||+++|+.+. +.++|+||+.|||+|+++.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~-k~a~WkIVvGHhPIySsG~h--g~~~ 234 (394)
T PTZ00422 158 TDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAP-KIADYIIVVGDKPIYSSGSS--KGDS 234 (394)
T ss_pred ecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhhc-cCCCeEEEEecCceeecCCC--CCCH
Confidence 21 2389999999631 1 225789999999997543 56789999999999998643 2345
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCc
Q 008826 387 CMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGG 466 (552)
Q Consensus 387 ~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 466 (552)
+++..|++||++|+||++|+||+|.+|+.. ++|+.||++|+||...+...
T Consensus 235 ~L~~~L~PLL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~~---------------------- 284 (394)
T PTZ00422 235 YLSYYLLPLLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKSI---------------------- 284 (394)
T ss_pred HHHHHHHHHHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCCC----------------------
Confidence 688999999999999999999999999974 46899999999998543210
Q ss_pred ccccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeCCCC
Q 008826 467 FCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDK 536 (552)
Q Consensus 467 ~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~~~~ 536 (552)
..++|+.|....+||..+++ +.+.+.++|+.+.+| ++++++.+.+.+..
T Consensus 285 ------------------~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G--kvL~~~~~~~~~~~ 333 (394)
T PTZ00422 285 ------------------MKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG--EVLYTHKQPLKKRK 333 (394)
T ss_pred ------------------CCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC--cEEEEeeecccchh
Confidence 12356778888899999998 888999999976667 89999999766443
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.98 E-value=1e-30 Score=265.13 Aligned_cols=243 Identities=24% Similarity=0.371 Sum_probs=171.9
Q ss_pred eEEEEEeCCCCCC-C-hHH---HHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHH-HHHH
Q 008826 199 KRIAIVGDLGLTY-N-TTC---TINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW-DYWG 271 (552)
Q Consensus 199 ~rfavigD~~~~~-~-~~~---~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~w-d~~~ 271 (552)
++|+++||+|... . ... .+.++. +.+|||||++||++|+++... .+..+| +.+.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~-------------------~~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGS-------------------VDDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCC-------------------CcchHHHHHHH
Confidence 4899999999852 2 222 233333 368999999999998753210 112344 3455
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccCc-chHH--hhhhcCCCCCCCCCCCcceEEEEcC------eEEEEEecccccC-
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TFVA--YSSRFAFPSEESGSLSSFYYSFNAG------GIHFIMLGAYISY- 341 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~-~f~~--y~~~f~~P~~~~~~~~~~yYsf~~G------~v~fI~Ldt~~~~- 341 (552)
+.++.+..++|+++++||||........ .+.. +..+|.+ ...||+|+++ +++||+|||....
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~ 133 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTM--------PAYYYRVSFPFPSSDTTVEFIMIDTVPLCG 133 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccC--------cchheEEEeecCCCCCEEEEEEEeChhHcC
Confidence 5555555689999999999987432111 1111 1222333 3479999998 7999999997431
Q ss_pred --------------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEc
Q 008826 342 --------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNG 407 (552)
Q Consensus 342 --------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsG 407 (552)
....+|++||+++|++.. .+|+||++|+|+++...... ....++.|++++++++|+++|+|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~~--~~~~~~~l~~l~~~~~v~~vl~G 208 (277)
T cd07378 134 NSDDIASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHGP--TSCLVDRLLPLLKKYKVDAYLSG 208 (277)
T ss_pred ccccccccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCCC--cHHHHHHHHHHHHHcCCCEEEeC
Confidence 236899999999999864 37999999999997643221 24668899999999999999999
Q ss_pred cccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCC
Q 008826 408 HVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQP 487 (552)
Q Consensus 408 H~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p 487 (552)
|+|.+++..+ ...|+.||++|+||...+..... ...+|
T Consensus 209 H~H~~~~~~~------~~~~~~~i~~G~~~~~~~~~~~~------------------------------------~~~~~ 246 (277)
T cd07378 209 HDHNLQHIKD------DGSGTSFVVSGAGSKARPSVKHI------------------------------------DKVPQ 246 (277)
T ss_pred Ccccceeeec------CCCCcEEEEeCCCcccCCCCCcc------------------------------------Ccccc
Confidence 9999998854 23699999999988865422100 01234
Q ss_pred CccceeeCCceEEEEEEecCCcEEEEEEE
Q 008826 488 DYSAFRESSFGHGILEVKNETWALWTWHR 516 (552)
Q Consensus 488 ~~sa~~~~~~G~~~l~v~n~t~~~~~~~~ 516 (552)
.|+.++...+||.+++|. .+.+.++|+.
T Consensus 247 ~~~~~~~~~~Gy~~i~v~-~~~l~~~~~~ 274 (277)
T cd07378 247 FFSGFTSSGGGFAYLELT-KEELTVRFYD 274 (277)
T ss_pred cccccccCCCCEEEEEEe-cCEEEEEEEC
Confidence 678888899999999995 5589999985
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.95 E-value=6.2e-27 Score=235.69 Aligned_cols=204 Identities=23% Similarity=0.366 Sum_probs=147.8
Q ss_pred ceEEEEEeCCCCCCC-----------------hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 198 PKRIAIVGDLGLTYN-----------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 198 ~~rfavigD~~~~~~-----------------~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
+++|+++||+|.+.. ....++.+.+. +||||+++||+++. +..
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~------~~~------------ 65 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNA------MPG------------ 65 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCC------Ccc------------
Confidence 799999999998731 12345556555 89999999999963 221
Q ss_pred cccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccc
Q 008826 259 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY 338 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~ 338 (552)
.+....+|+.+.+.++.+...+|+++++||||+........+..|...| +..||+|++|+++||+||+.
T Consensus 66 -~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~ 134 (262)
T cd07395 66 -DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQ 134 (262)
T ss_pred -hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHh----------CCcceEEEECCEEEEEeccc
Confidence 0111245777777777776789999999999986433223334444444 23589999999999999996
Q ss_pred ccC------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCC----chhHHHHHHHHHHHHHcCCcEEEEcc
Q 008826 339 ISY------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY----REAECMRVEMEALLYSYGVDIVFNGH 408 (552)
Q Consensus 339 ~~~------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~----~~~~~~r~~l~~ll~~~~VdlvlsGH 408 (552)
... ....+|++||+++|+++.+.+.+++||++|+|++....... ......+++|.++|++++|+++|+||
T Consensus 135 ~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH 214 (262)
T cd07395 135 LFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGH 214 (262)
T ss_pred cccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECc
Confidence 432 23579999999999997544567899999999986432211 12235678999999999999999999
Q ss_pred ccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 409 VHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 409 ~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
+|.+++.. -.|+.+++++++|.
T Consensus 215 ~H~~~~~~--------~~g~~~~~~~~~~~ 236 (262)
T cd07395 215 YHRNAGGR--------YGGLEMVVTSAIGA 236 (262)
T ss_pred cccCCceE--------ECCEEEEEcCceec
Confidence 99887753 23777887777765
No 7
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.94 E-value=2.1e-24 Score=233.82 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=143.0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEeCCCCCCChHHHHHHHHh-CCCCEEE
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSS-NEPDLVL 229 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~~~~~~~~rfavigD~~~~~~~~~~l~~l~~-~~pDfvl 229 (552)
..++++|.|+||+|+|+|+||+........|.+++|||+|..... ++||+++||.+.......+++++.+ .+|||+|
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~--~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPD--PFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred CCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCC--ceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 458999999999999999999998644578899999999765443 6999999999886566788899988 6999999
Q ss_pred EcCCccccccc--ccCCCCCCCC--cCCCCCCccccccHHHHHHHH--HHHHHhhhcCCeEEecCCchhcccccC-----
Q 008826 230 LVGDVTYANLY--LTNGTGSDCY--SCSFSKTPIHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGN----- 298 (552)
Q Consensus 230 ~~GDl~Y~d~~--~~~G~~~~cy--~~~~~~~~~~e~y~~~wd~~~--~~l~~l~~~iP~~~v~GNHD~~~~~~~----- 298 (552)
|+||.+|++.. ........-- ..........+.|+.+|..+. ..++.+.+++|++.++.+||+.++...
T Consensus 138 ~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~ 217 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAEN 217 (453)
T ss_dssp E-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-ST
T ss_pred EeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCcccc
Confidence 99999999741 0000000000 000011234456766666553 457778889999999999999765331
Q ss_pred -------------cchHHhhhhcCCCCCC-CCCCCcceEEEEcCe-EEEEEecccccCC---------------------
Q 008826 299 -------------QTFVAYSSRFAFPSEE-SGSLSSFYYSFNAGG-IHFIMLGAYISYD--------------------- 342 (552)
Q Consensus 299 -------------~~f~~y~~~f~~P~~~-~~~~~~~yYsf~~G~-v~fI~Ldt~~~~~--------------------- 342 (552)
..+.+|.+........ .+.....|++|.+|+ +.|++||++....
T Consensus 218 ~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~m 297 (453)
T PF09423_consen 218 HQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTM 297 (453)
T ss_dssp T---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--S
T ss_pred ccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCc
Confidence 0112333332222111 122456799999999 9999999863221
Q ss_pred CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCC-----------CCCCchhHHHHHHHHHHHHHcCCc--EEEEccc
Q 008826 343 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSY-----------SSHYREAECMRVEMEALLYSYGVD--IVFNGHV 409 (552)
Q Consensus 343 ~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~-----------~~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~ 409 (552)
.+.+|++||++.|++ +.++|+|+..-.|+.... ...|......|++|.++|.+.++. ++|+|++
T Consensus 298 LG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDv 374 (453)
T PF09423_consen 298 LGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDV 374 (453)
T ss_dssp S-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SS
T ss_pred CCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCc
Confidence 278999999999998 458999999888775432 234555567799999999988875 8999999
Q ss_pred cCceeee
Q 008826 410 HAYERSN 416 (552)
Q Consensus 410 H~yeR~~ 416 (552)
|......
T Consensus 375 H~~~~~~ 381 (453)
T PF09423_consen 375 HASAASR 381 (453)
T ss_dssp SSEEEEE
T ss_pred chheeee
Confidence 9876664
No 8
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.91 E-value=4.4e-23 Score=204.58 Aligned_cols=192 Identities=23% Similarity=0.327 Sum_probs=136.1
Q ss_pred EEEEEeCCCCCCC-------------hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 200 RIAIVGDLGLTYN-------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 200 rfavigD~~~~~~-------------~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
||+++||+|.+.. ..++++.+.+. +||+||++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 6999999998753 13455666665 89999999999952 22 2
Q ss_pred HHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC---
Q 008826 265 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--- 341 (552)
Q Consensus 265 ~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~--- 341 (552)
..|+.+.+.++.+ ++|++.++||||... .+...|..... .....+|+|+.++++||+||+....
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~ 123 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRA--------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHG 123 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHH--------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcC
Confidence 3456666777766 799999999999842 12222211110 2345689999999999999986432
Q ss_pred -CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceeeeec
Q 008826 342 -DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRV 418 (552)
Q Consensus 342 -~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~pv 418 (552)
....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|......
T Consensus 124 ~~~~~~ql~wL~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-- 198 (240)
T cd07402 124 GELCAAQLDWLEAALAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS-- 198 (240)
T ss_pred CEECHHHHHHHHHHHHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--
Confidence 236889999999999864 2347778888876643211111 112367899999999 99999999999876553
Q ss_pred cccccCCCCcEEEEECCCCCc
Q 008826 419 FNYTLDPCGPVHITIGDGGNL 439 (552)
Q Consensus 419 ~n~~~~~~G~vyiv~G~gG~~ 439 (552)
-+|+.++++|+.|..
T Consensus 199 ------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 199 ------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred ------ECCEEEEEcCcceee
Confidence 368899999887763
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.90 E-value=3.8e-23 Score=208.83 Aligned_cols=197 Identities=23% Similarity=0.307 Sum_probs=136.1
Q ss_pred eEEEEEeCCCCCCC--------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 199 KRIAIVGDLGLTYN--------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 199 ~rfavigD~~~~~~--------------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
|||+++||+|.... ..++++++.+.+||+||++||+++. +.. ...
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 69999999996542 1345667777789999999999952 210 012
Q ss_pred HHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc----
Q 008826 265 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS---- 340 (552)
Q Consensus 265 ~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~---- 340 (552)
..|+.+.+.++.+ ++|+++++||||...... .+.. +... ...+..||+|++++++||+||+...
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~-----~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~ 127 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSR-----EYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALG 127 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccH-----hhhh-cccc----cCCCCceEEEecCCcEEEEEeCCcccccc
Confidence 4566666666655 689999999999864321 1111 0001 1234579999999999999998521
Q ss_pred ------------------------------CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHH
Q 008826 341 ------------------------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390 (552)
Q Consensus 341 ------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~ 390 (552)
.....+|++||+++|++...+. .++||++|+|++...... ......++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~-~~viV~~Hhp~~~~~~~~-~~~~~~~~ 205 (267)
T cd07396 128 RPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANG-EKVIIFSHFPLHPESTSP-HGLLWNHE 205 (267)
T ss_pred CCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcC-CeEEEEEeccCCCCCCCc-cccccCHH
Confidence 1235899999999999875332 458999999987654211 11112257
Q ss_pred HHHHHHHHc-CCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 391 EMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 391 ~l~~ll~~~-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
.+.++|+++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 206 ~~~~ll~~~~~V~~v~~GH~H~~~~~~--------~~gi~~~~~~a~~~ 246 (267)
T cd07396 206 EVLSILRAYGCVKACISGHDHEGGYAQ--------RHGIHFLTLEGMVE 246 (267)
T ss_pred HHHHHHHhCCCEEEEEcCCcCCCCccc--------cCCeeEEEechhhc
Confidence 889999996 89999999999987542 46888998877544
No 10
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.90 E-value=9.4e-23 Score=210.32 Aligned_cols=283 Identities=22% Similarity=0.292 Sum_probs=197.7
Q ss_pred CccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCC
Q 008826 113 VASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPAS 192 (552)
Q Consensus 113 ~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~ 192 (552)
+.-.+||++..+..+.+..|+... .-...+.++|.++||+|+|.|+||+...+ ..|.+++|||+|..
T Consensus 70 v~V~wEvs~~~~f~~ivr~gt~~a-----------~p~~dhtv~v~~~gL~P~~~yfYRf~~~~--~~spvGrtrTapa~ 136 (522)
T COG3540 70 VPVIWEVSTDENFSNIVRKGTVIA-----------SPELDHTVHVDLRGLSPDQDYFYRFKAGD--ERSPVGRTRTAPAP 136 (522)
T ss_pred cceEEEecCCccHHHHHhcCCccC-----------CcccCceEEEeccCCCCCceEEEEEeeCC--ccccccccccCCCC
Confidence 345678887776544443333211 11245789999999999999999999887 78899999999998
Q ss_pred CCCCCceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcC-CCCC-----CccccccHHH
Q 008826 193 GPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSC-SFSK-----TPIHETYQPR 266 (552)
Q Consensus 193 ~~~~~~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~-~~~~-----~~~~e~y~~~ 266 (552)
+....-++|++.++.|...+...+.+.|.+.+|||+||+||.+|+++....-.......+ ...+ ....+.|+.+
T Consensus 137 ~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~r 216 (522)
T COG3540 137 GRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGR 216 (522)
T ss_pred CCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhH
Confidence 765445666677777777677788999999999999999999999753210000000000 1111 2344678888
Q ss_pred HHHHH--HHHHHhhhcCCeEEecCCchhcccccC-------------------cchHHhhhhcCCCCCCCC--CCCcceE
Q 008826 267 WDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGN-------------------QTFVAYSSRFAFPSEESG--SLSSFYY 323 (552)
Q Consensus 267 wd~~~--~~l~~l~~~iP~~~v~GNHD~~~~~~~-------------------~~f~~y~~~f~~P~~~~~--~~~~~yY 323 (552)
|..++ ..++...+..|+++.+.+||..++... ..+++|.+. ||..... .....|.
T Consensus 217 ya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~--mPiR~~~~p~~~~lYR 294 (522)
T COG3540 217 YAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEH--MPIRYSSLPTDGRLYR 294 (522)
T ss_pred HhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHHh--CccccccCCccceeee
Confidence 87764 567888899999999999999876321 122444443 4543222 2357899
Q ss_pred EEEcCe-EEEEEecccccC------C----------------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCC--
Q 008826 324 SFNAGG-IHFIMLGAYISY------D----------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSY-- 378 (552)
Q Consensus 324 sf~~G~-v~fI~Ldt~~~~------~----------------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~-- 378 (552)
+|.||+ +.|.+||++... + .+.+|.+||+..|.+ +++.|.|+..-.|+---.
T Consensus 295 ~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d 371 (522)
T COG3540 295 SFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFD 371 (522)
T ss_pred eeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecC
Confidence 999998 679999986433 1 278999999999999 688999998888763211
Q ss_pred -----------CCCCchhHHHHHHHHHHHHHcCCc--EEEEccccCce
Q 008826 379 -----------SSHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYE 413 (552)
Q Consensus 379 -----------~~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~ye 413 (552)
...+.....-|+.|..++++.++. ++|+|++|...
T Consensus 372 ~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 372 GSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred CCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 012233445689999999999875 89999999543
No 11
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.5e-22 Score=195.02 Aligned_cols=204 Identities=22% Similarity=0.317 Sum_probs=136.1
Q ss_pred CceEEEEEeCCCCCCC--hHHHHH---HHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH-
Q 008826 197 YPKRIAIVGDLGLTYN--TTCTIN---HMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY- 269 (552)
Q Consensus 197 ~~~rfavigD~~~~~~--~~~~l~---~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~- 269 (552)
..++|+++||+|.... ...+.. .|. +.+.||||.+||++|.++..+. +.+++..
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~-------------------~Dp~Fq~s 102 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSE-------------------NDPRFQDS 102 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCC-------------------CChhHHhh
Confidence 3799999999996532 222222 232 3689999999999997654221 1233322
Q ss_pred HHHHHHHhhhcCCeEEecCCchhcccccCc---chHHhhhhcCCCCCCCCCCCcceEE------EEcCeEEEEEeccccc
Q 008826 270 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ---TFVAYSSRFAFPSEESGSLSSFYYS------FNAGGIHFIMLGAYIS 340 (552)
Q Consensus 270 ~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~---~f~~y~~~f~~P~~~~~~~~~~yYs------f~~G~v~fI~Ldt~~~ 340 (552)
|.+....-..+.||+.+.||||+.++...+ .+.....||..|.. ||. +..-++.++++|+...
T Consensus 103 F~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~ 174 (336)
T KOG2679|consen 103 FENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTL 174 (336)
T ss_pred hhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccH--------Hhhcceeeeeeccccccchhhheec
Confidence 223322223467999999999998775433 24555567766541 211 1112344555554321
Q ss_pred -------CC-------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEE
Q 008826 341 -------YD-------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFN 406 (552)
Q Consensus 341 -------~~-------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdlvls 406 (552)
+. ....|+.||+..|++ +.++|+||+.|+|+.+.. +.+...++++.|.+||+.++||++++
T Consensus 175 ~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~n 249 (336)
T KOG2679|consen 175 CTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYIN 249 (336)
T ss_pred ccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEe
Confidence 11 146789999999999 578999999999998864 44567799999999999999999999
Q ss_pred ccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 407 GHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 407 GH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
||+|..|..-- ...++-|+++|+|..
T Consensus 250 GHDHcLQhis~------~e~~iqf~tSGagSk 275 (336)
T KOG2679|consen 250 GHDHCLQHISS------PESGIQFVTSGAGSK 275 (336)
T ss_pred cchhhhhhccC------CCCCeeEEeeCCccc
Confidence 99999988741 134566777776654
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.88 E-value=5e-21 Score=194.24 Aligned_cols=191 Identities=19% Similarity=0.255 Sum_probs=123.5
Q ss_pred ceEEEEEeCCCCCC---------C----hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccc
Q 008826 198 PKRIAIVGDLGLTY---------N----TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 262 (552)
Q Consensus 198 ~~rfavigD~~~~~---------~----~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~ 262 (552)
++||++++|+|+.. + ..++++++.+. +|||||++||++. +|.
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~------~~~----------------- 70 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ------DHS----------------- 70 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC------CCC-----------------
Confidence 79999999999732 1 23455666543 6999999999994 222
Q ss_pred cHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC-
Q 008826 263 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY- 341 (552)
Q Consensus 263 y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~- 341 (552)
...+..+.+.++.+ .+|+++++||||... .+..+.....+ ...++.+..++++||+||+....
T Consensus 71 -~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~-----~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~ 134 (275)
T PRK11148 71 -SEAYQHFAEGIAPL--RKPCVWLPGNHDFQP-----AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGV 134 (275)
T ss_pred -HHHHHHHHHHHhhc--CCcEEEeCCCCCChH-----HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCC
Confidence 13455566666665 689999999999842 12222111111 12233445567999999996422
Q ss_pred ---CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceeee
Q 008826 342 ---DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSN 416 (552)
Q Consensus 342 ---~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~ 416 (552)
..+.+|++||+++|++... .+-+|+++|+|+.... ..... .....++|.++++++ +|+++|+||+|.....
T Consensus 135 ~~G~l~~~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~~-~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~- 210 (275)
T PRK11148 135 PHGELSEYQLEWLERKLADAPE--RHTLVLLHHHPLPAGC-AWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL- 210 (275)
T ss_pred cCCEeCHHHHHHHHHHHhhCCC--CCeEEEEcCCCCCCCc-chhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc-
Confidence 2468999999999998642 2335556566654421 11110 111246899999998 8999999999985433
Q ss_pred eccccccCCCCcEEEEECCCCC
Q 008826 417 RVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 417 pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
.-+|+.++++++.+.
T Consensus 211 -------~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 211 -------DWNGRRLLATPSTCV 225 (275)
T ss_pred -------eECCEEEEEcCCCcC
Confidence 135787777666554
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.87 E-value=6.4e-21 Score=191.31 Aligned_cols=192 Identities=21% Similarity=0.269 Sum_probs=127.0
Q ss_pred EEEEeCCCCCCCh--------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 201 IAIVGDLGLTYNT--------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 201 favigD~~~~~~~--------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
|++++|+|.+... ..+++.+.+.+||+|+++||++.... ..+. ....++.+|+.|.+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~--~~~~-------------~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKT--GNKL-------------PSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccc--cCCC-------------cccccHHHHHHHHH
Confidence 7899999987531 12345566789999999999994311 1110 01233567888888
Q ss_pred HHHHhh--hcCCeEEecCCchhcccccCcchHHhhhhc-CCCCCCCCCCCcceEE--EEcCeEEEEEeccccc-------
Q 008826 273 FMQNLV--SKVPIMVVEGNHEIEAQAGNQTFVAYSSRF-AFPSEESGSLSSFYYS--FNAGGIHFIMLGAYIS------- 340 (552)
Q Consensus 273 ~l~~l~--~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f-~~P~~~~~~~~~~yYs--f~~G~v~fI~Ldt~~~------- 340 (552)
.+.... ...|++.++||||............|..++ .... ....+|. ++.|+++||+||+...
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~ 141 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPF 141 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCC
Confidence 776643 258999999999996432222222222222 1110 1122333 3459999999999642
Q ss_pred ---CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeee
Q 008826 341 ---YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 417 (552)
Q Consensus 341 ---~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~p 417 (552)
.....+|++||+++|++.. +.+++||++|+|++...... . ...+ .+.++|++++|+++|+||+|.+++..|
T Consensus 142 ~~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~-~--~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 142 NFFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPS-A--KSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred ceeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCC-c--chhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 2246899999999999864 34579999999986533211 1 1122 389999999999999999999999655
Q ss_pred c
Q 008826 418 V 418 (552)
Q Consensus 418 v 418 (552)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 4
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.81 E-value=3.6e-19 Score=173.97 Aligned_cols=149 Identities=19% Similarity=0.270 Sum_probs=108.4
Q ss_pred eEEEEEeCCCCCCCh---------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT---------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 269 (552)
Q Consensus 199 ~rfavigD~~~~~~~---------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~ 269 (552)
|||++++|+|..... ..+++.+.+.+||+|+++||+++. +.. ..+|+.
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~------~~~-----------------~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDD------GDN-----------------DAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCC------CCC-----------------HHHHHH
Confidence 689999999975431 123344445789999999999953 210 257888
Q ss_pred HHHHHHHhh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHH
Q 008826 270 WGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 348 (552)
Q Consensus 270 ~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~ 348 (552)
+.+.++.+. ..+|+++++||||. ++.+|+ ....+|+
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~---------------------------------------~~~ld~----~~~~~ql 94 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDL---------------------------------------VLALEF----GPRDEVL 94 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcc---------------------------------------hhhCCC----CCCHHHH
Confidence 888888886 67999999999992 233333 2358999
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-----hHHHHHHHHHHHHHc-CCcEEEEccccCceeee
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-----AECMRVEMEALLYSY-GVDIVFNGHVHAYERSN 416 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-----~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~ 416 (552)
+||+++|++.. .+++|+++|+|++......... ....++.|++|++++ +|++||+||+|.+.+..
T Consensus 95 ~WL~~~L~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 95 QWANEVLKKHP---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred HHHHHHHHHCC---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 99999999853 2358999999988654321111 123356788999999 79999999999998775
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.77 E-value=6.4e-18 Score=173.23 Aligned_cols=191 Identities=20% Similarity=0.285 Sum_probs=126.8
Q ss_pred EeCCCCCCC---hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH--HHHHHHHHHHH
Q 008826 204 VGDLGLTYN---TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP--RWDYWGRFMQN 276 (552)
Q Consensus 204 igD~~~~~~---~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~--~wd~~~~~l~~ 276 (552)
+|+.+.... ..++++.+.+. +|||||++||+++.+.+.. ..+ ... .+..+.+.++.
T Consensus 43 ~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~----------------~~~-~~~~~~~~~~~~~l~~ 105 (296)
T cd00842 43 WGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQ----------------TPE-TLVLISISNLTSLLKK 105 (296)
T ss_pred CcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhh----------------chh-HHHHHHHHHHHHHHHH
Confidence 555554332 34567777776 8999999999996542210 000 011 24556666777
Q ss_pred hhhcCCeEEecCCchhccccc-------CcchHHhhhhcC--CCCCC-CCCCCcceEEEE-cCeEEEEEecccccC----
Q 008826 277 LVSKVPIMVVEGNHEIEAQAG-------NQTFVAYSSRFA--FPSEE-SGSLSSFYYSFN-AGGIHFIMLGAYISY---- 341 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~~~~~-------~~~f~~y~~~f~--~P~~~-~~~~~~~yYsf~-~G~v~fI~Ldt~~~~---- 341 (552)
....+|+++++||||...... ...+..+...|. ++... .....+.||++. .++++||+|||...+
T Consensus 106 ~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~ 185 (296)
T cd00842 106 AFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNF 185 (296)
T ss_pred hCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccCh
Confidence 778899999999999975421 122333333332 23211 112346789998 889999999996432
Q ss_pred -------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccCc
Q 008826 342 -------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAY 412 (552)
Q Consensus 342 -------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~y 412 (552)
....+|++||+++|+++++.. ..++|++|+|+....... ....+++|.+|+++|. |.++|+||+|..
T Consensus 186 ~~~~~~~~~~~~Ql~WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d 261 (296)
T cd00842 186 WLLGSNETDPAGQLQWLEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRD 261 (296)
T ss_pred hhhccCCCCHHHHHHHHHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccc
Confidence 234789999999999976433 347788899987643221 1345688999999996 788999999987
Q ss_pred eee
Q 008826 413 ERS 415 (552)
Q Consensus 413 eR~ 415 (552)
+..
T Consensus 262 ~~~ 264 (296)
T cd00842 262 EFR 264 (296)
T ss_pred eEE
Confidence 665
No 16
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.72 E-value=1.4e-17 Score=152.53 Aligned_cols=188 Identities=23% Similarity=0.274 Sum_probs=100.7
Q ss_pred eEEEEEeCCCCCCChH-----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHH-H
Q 008826 199 KRIAIVGDLGLTYNTT-----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG-R 272 (552)
Q Consensus 199 ~rfavigD~~~~~~~~-----~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~-~ 272 (552)
+||+++||+|...... .......+.++|+||++||+++.. .. ...+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~------~~-----------------~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGG------NP-----------------SEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSS------SH-----------------HHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccc------cc-----------------cccchhhhcc
Confidence 6999999999986433 233444468999999999999642 10 11111111 1
Q ss_pred HHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcC-CCCCCCCCCCcceEEEEcCeEEEEEecccccCCCc---HHHH
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKS---GHQY 348 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~-~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~---~~Q~ 348 (552)
........+|+++++||||+................. ..........+...........+............ ..+.
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWW 137 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcc
Confidence 2344467899999999999974321111111111100 00000000000001111112222222211111122 2333
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCc--hhHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAY 412 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 412 (552)
.|+...++. ...+++||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 138 ~~~~~~~~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 138 LWLLLLLEA---KNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHE---EEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccc---ccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 333333333 45678999999999987543211 01235678999999999999999999986
No 17
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.67 E-value=1.7e-15 Score=151.83 Aligned_cols=169 Identities=18% Similarity=0.217 Sum_probs=109.0
Q ss_pred HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH----HHHHHHHhhhcCCeEEecC
Q 008826 214 TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY----WGRFMQNLVSKVPIMVVEG 288 (552)
Q Consensus 214 ~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~----~~~~l~~l~~~iP~~~v~G 288 (552)
.+.++.+.+ .+||+||++||+++. |... -..+|.. +.+.+.++...+|++.++|
T Consensus 34 r~~~~~~~~~l~PD~vv~lGDL~d~------G~~~---------------~~~~~~~~~~rf~~i~~~~~~~~pv~~VpG 92 (257)
T cd08163 34 RRNWRYMQKQLKPDSTIFLGDLFDG------GRDW---------------ADEYWKKEYNRFMRIFDPSPGRKMVESLPG 92 (257)
T ss_pred HHHHHHHHHhcCCCEEEEecccccC------CeeC---------------cHHHHHHHHHHHHHHhcCCCccceEEEeCC
Confidence 345555554 589999999999852 3311 0234543 3333333333579999999
Q ss_pred CchhcccccC--cchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc-----CCCcHHHHHHHHHHHhcccCC
Q 008826 289 NHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS-----YDKSGHQYKWLEKDLANVDRS 361 (552)
Q Consensus 289 NHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~-----~~~~~~Q~~WL~~~L~~~~r~ 361 (552)
|||+...... .....|.+.|. ..+|+|++|+++||+||+... .....+|.+||++.|+....
T Consensus 93 NHDig~~~~~~~~~~~rf~~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~- 161 (257)
T cd08163 93 NHDIGFGNGVVLPVRQRFEKYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK- 161 (257)
T ss_pred CcccCCCCCCCHHHHHHHHHHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-
Confidence 9998543211 23455666663 236899999999999999632 22356899999999987542
Q ss_pred CCCEEEEEcCCCcccCCCCCCc---h------------hH-HH-HHHHHHHHHHcCCcEEEEccccCceee
Q 008826 362 VTPWLVATWHPPWYSSYSSHYR---E------------AE-CM-RVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 362 ~~~w~Iv~~H~P~y~s~~~~~~---~------------~~-~~-r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
.. .+||++|+|+|........ + .+ .+ .+.-..||++.+..+||+||+|.|=..
T Consensus 162 ~~-p~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 162 SK-PRILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CC-cEEEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 22 3899999999865321110 0 00 11 234457788889999999999988554
No 18
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.66 E-value=9.9e-16 Score=151.57 Aligned_cols=191 Identities=17% Similarity=0.203 Sum_probs=117.2
Q ss_pred EEEEeCCCCCCC-----------hHHHHHHHHhC------CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 201 IAIVGDLGLTYN-----------TTCTINHMSSN------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 201 favigD~~~~~~-----------~~~~l~~l~~~------~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
|.+++|+|+... ..+.++++.+. +||+||++||+++. +.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~------~~------------------ 56 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA------MK------------------ 56 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC------CC------------------
Confidence 357899997731 13455555544 89999999999842 11
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc-C-
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS-Y- 341 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~-~- 341 (552)
........+.++.+ ..|+++|+||||+... ....+.+.+. .. +..-....++.++++.|+.++.... +
T Consensus 57 ~~~~~~~l~~l~~l--~~~v~~V~GNHD~~~~----~~~~~~~~l~--~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 57 LEEAKLDLAWIDAL--PGTKVLLKGNHDYWWG----SASKLRKALE--ES--RLALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred hHHHHHHHHHHHhC--CCCeEEEeCCccccCC----CHHHHHHHHH--hc--CeEEeccCcEEECCEEEEEEEeeCCCCC
Confidence 01222333344443 3578999999998421 1122222221 00 0000013445678889998763211 0
Q ss_pred ---------------CCcHHHHHHHHHHHhcccCCC-CCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEE
Q 008826 342 ---------------DKSGHQYKWLEKDLANVDRSV-TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 405 (552)
Q Consensus 342 ---------------~~~~~Q~~WL~~~L~~~~r~~-~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdlvl 405 (552)
.....|++||++.|++..... ..++|++.|+|++..... .+.+..++++++++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl 198 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICV 198 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEE
Confidence 113569999999999864322 246899999998764321 23677888999999999
Q ss_pred EccccCceeeeeccccccCCCCcEEEEECCC
Q 008826 406 NGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 406 sGH~H~yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
+||+|.+++..|+.. .-+|+.|+++.++
T Consensus 199 ~GH~H~~~~~~~~~~---~~~gi~~~~~~~~ 226 (232)
T cd07393 199 YGHLHGVGRDRAING---ERGGIRYQLVSAD 226 (232)
T ss_pred ECCCCCCcccccccc---eECCEEEEEEcch
Confidence 999999988766532 2357778766654
No 19
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.65 E-value=1.2e-15 Score=147.45 Aligned_cols=150 Identities=21% Similarity=0.224 Sum_probs=96.8
Q ss_pred ceEEEEEeCCCCCCCh------------HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 198 PKRIAIVGDLGLTYNT------------TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 198 ~~rfavigD~~~~~~~------------~~~l~~-l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
.+||++++|+|..... ...+++ +.+.+||+||++||+++.... . .
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~--------------------~--~ 59 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT--------------------N--D 59 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC--------------------c--h
Confidence 5899999999986532 123333 335689999999999964210 0 0
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCC
Q 008826 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 343 (552)
Q Consensus 265 ~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~ 343 (552)
..+..+.++++.+. .++|+++++||||. ....
T Consensus 60 ~~~~~~~~~~~~l~~~~~p~~~~~GNHD~-----------------------------------------------~g~l 92 (199)
T cd07383 60 NSTSALDKAVSPMIDRKIPWAATFGNHDG-----------------------------------------------YDWI 92 (199)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECccCCC-----------------------------------------------CCCC
Confidence 12344455555553 47999999999990 1123
Q ss_pred cHHHHHHHHHHHhccc--CCCCCEEEEEcCCCcccCCCC---------CCch---hHHHHHHHHH-HHHHcCCcEEEEcc
Q 008826 344 SGHQYKWLEKDLANVD--RSVTPWLVATWHPPWYSSYSS---------HYRE---AECMRVEMEA-LLYSYGVDIVFNGH 408 (552)
Q Consensus 344 ~~~Q~~WL~~~L~~~~--r~~~~w~Iv~~H~P~y~s~~~---------~~~~---~~~~r~~l~~-ll~~~~VdlvlsGH 408 (552)
...|++||+++|++.. +....+.++++|+|+...... ...+ .......+.. +.+..+|+++|+||
T Consensus 93 ~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH 172 (199)
T cd07383 93 RPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGH 172 (199)
T ss_pred CHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCC
Confidence 5799999999999863 223456899999987653211 1111 0011233444 44566899999999
Q ss_pred ccCceeee
Q 008826 409 VHAYERSN 416 (552)
Q Consensus 409 ~H~yeR~~ 416 (552)
+|.++...
T Consensus 173 ~H~~~~~~ 180 (199)
T cd07383 173 DHGNDFCG 180 (199)
T ss_pred CCCcceec
Confidence 99987654
No 20
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.64 E-value=2.2e-15 Score=149.73 Aligned_cols=176 Identities=18% Similarity=0.215 Sum_probs=107.6
Q ss_pred EEEEEeCCCCCCCh-------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 200 RIAIVGDLGLTYNT-------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 200 rfavigD~~~~~~~-------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
||++++|+|...+. ...++.+.+.++|+|+++||++.. . .+...+.+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~------~--------------------~~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND------F--------------------QRSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc------h--------------------hhHHHHHH
Confidence 58999999975322 235566667889999999999931 0 11112333
Q ss_pred HHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCC----------
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD---------- 342 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~---------- 342 (552)
.+..+ ..+|++.++||||+.... .+..+.+.+. .....+.++.+..++++|+.++...++.
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~---~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~ 125 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDL---TYEEIESNDS-----PLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEI 125 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCC---CHHHHHhccc-----hhhhcccccccCCCceEEEeeccceecccccccCHHHH
Confidence 33332 468999999999985221 1222222110 0012233444445778888888533220
Q ss_pred ---------------------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCC------CCCchhH--HHHHHHH
Q 008826 343 ---------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS------SHYREAE--CMRVEME 393 (552)
Q Consensus 343 ---------------------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~------~~~~~~~--~~r~~l~ 393 (552)
...+|++||++.|++... .+ +|+++|+|+..... ..+.... .....|+
T Consensus 126 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~~-~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~ 202 (239)
T TIGR03729 126 LRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDN--KQ-VIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFG 202 (239)
T ss_pred HHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCC--CC-EEEEEcccchHHHhcCCCCCcchhhhhhccChHHHH
Confidence 136789999999988642 23 67777777644211 1121111 1146899
Q ss_pred HHHHHcCCcEEEEccccCce
Q 008826 394 ALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 394 ~ll~~~~VdlvlsGH~H~ye 413 (552)
+++++++|+++|+||+|.-.
T Consensus 203 ~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 203 QLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHhCCCEEEECCccCCC
Confidence 99999999999999999764
No 21
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.63 E-value=6.6e-15 Score=139.89 Aligned_cols=167 Identities=18% Similarity=0.193 Sum_probs=102.0
Q ss_pred EEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhc
Q 008826 201 IAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSK 280 (552)
Q Consensus 201 favigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~ 280 (552)
|+++||+|........ ..+.+.++|+||++||+++. +.. .....+ +.++. .+
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~~------------------~~~~~~-~~l~~--~~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GGK------------------EAAVEI-NLLLA--IG 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CCH------------------HHHHHH-HHHHh--cC
Confidence 5789999986533222 34556789999999999942 220 111112 33433 37
Q ss_pred CCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc------CCCcHHHHHHHHHH
Q 008826 281 VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS------YDKSGHQYKWLEKD 354 (552)
Q Consensus 281 iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~------~~~~~~Q~~WL~~~ 354 (552)
+|+++++||||.... ......... ... -..+.+++++|+.+++... .....+|++|+ +.
T Consensus 53 ~p~~~v~GNHD~~~~-----~~~~~~~~~-------~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~ 117 (188)
T cd07392 53 VPVLAVPGNCDTPEI-----LGLLTSAGL-------NLH--GKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GR 117 (188)
T ss_pred CCEEEEcCCCCCHHH-----HHhhhcCcE-------ecC--CCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hh
Confidence 899999999997421 111100000 011 1345678899999987421 13367899998 45
Q ss_pred HhcccCCCCCEEEEEcCCCcccC-CCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 355 LANVDRSVTPWLVATWHPPWYSS-YSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 355 L~~~~r~~~~w~Iv~~H~P~y~s-~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
|+.. ..+.+|+++|+|++.. ............+.+.+++++++++++|+||+|.-.
T Consensus 118 l~~~---~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 118 LNNL---LAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hhcc---CCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 5442 2234788888888763 111111111224688899999999999999999754
No 22
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.62 E-value=6.7e-15 Score=155.58 Aligned_cols=94 Identities=24% Similarity=0.348 Sum_probs=71.5
Q ss_pred CcceEEEE-cCeEEEEEeccccc-----CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCc-----hhHH
Q 008826 319 SSFYYSFN-AGGIHFIMLGAYIS-----YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR-----EAEC 387 (552)
Q Consensus 319 ~~~yYsf~-~G~v~fI~Ldt~~~-----~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~-----~~~~ 387 (552)
+..||+|+ .++++||+||+... .....+|++||+++|++. ..+++||++|||++.......+ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 89999999999643 234799999999999974 3356899999998765321111 1112
Q ss_pred HHHHHHHHHHHc-CCcEEEEccccCceee
Q 008826 388 MRVEMEALLYSY-GVDIVFNGHVHAYERS 415 (552)
Q Consensus 388 ~r~~l~~ll~~~-~VdlvlsGH~H~yeR~ 415 (552)
..++|.++|++| +|.++|+||+|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 346899999999 7999999999976544
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.58 E-value=3.3e-14 Score=144.47 Aligned_cols=179 Identities=26% Similarity=0.355 Sum_probs=119.2
Q ss_pred eEEEEEeCCCCC--CC-h----HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHH
Q 008826 199 KRIAIVGDLGLT--YN-T----TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (552)
Q Consensus 199 ~rfavigD~~~~--~~-~----~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~ 271 (552)
+||++++|+|.. .. . .++++++...+||+||++||+++. |. ....+...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 489999999988 22 2 234566666889999999999952 32 23445566
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEc-CeEEEEEeccccc----CCCcHH
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNA-GGIHFIMLGAYIS----YDKSGH 346 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~-G~v~fI~Ldt~~~----~~~~~~ 346 (552)
++++.+....|++++|||||..... ...+...+.... ..+..... ++++++.+|+... ...+..
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~ 125 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVVN----GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAE 125 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCchH----HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHH
Confidence 6777556688999999999986432 222322221110 11111122 6789999999643 235799
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccCc
Q 008826 347 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAY 412 (552)
Q Consensus 347 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~y 412 (552)
|++||++.|++........+|+++|+|..................+..++..++ |+++|+||.|..
T Consensus 126 q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 126 QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999999999986533112468888888776443332222233456777888888 999999999976
No 24
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.54 E-value=8.9e-14 Score=126.92 Aligned_cols=132 Identities=27% Similarity=0.386 Sum_probs=91.4
Q ss_pred EEEEeCCCCCCChH-----------HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH
Q 008826 201 IAIVGDLGLTYNTT-----------CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 269 (552)
Q Consensus 201 favigD~~~~~~~~-----------~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~ 269 (552)
|++++|+|.+.... ..++.+.+.++|+|+++||+++. +. +.+|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999875321 13445556799999999999963 22 245667
Q ss_pred HHHHHHHhhhc-CCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHH
Q 008826 270 WGRFMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 348 (552)
Q Consensus 270 ~~~~l~~l~~~-iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~ 348 (552)
+.++++.+... +|++.++||||.
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD~-------------------------------------------------------- 80 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHDV-------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCeE--------------------------------------------------------
Confidence 77888887543 699999999996
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCc
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGP 428 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~ 428 (552)
|+++|+|++.......... ..++.+.+++++++++++++||+|......-. ...+++
T Consensus 81 ------------------iv~~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~~ 137 (144)
T cd07400 81 ------------------IVVLHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGGL 137 (144)
T ss_pred ------------------EEEecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCCE
Confidence 6777777765432211111 14567999999999999999999986554211 124567
Q ss_pred EEEEECC
Q 008826 429 VHITIGD 435 (552)
Q Consensus 429 vyiv~G~ 435 (552)
+++..|+
T Consensus 138 ~~~~aGs 144 (144)
T cd07400 138 VVIGAGT 144 (144)
T ss_pred EEEecCC
Confidence 7776664
No 25
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.53 E-value=1.6e-14 Score=112.55 Aligned_cols=43 Identities=40% Similarity=0.686 Sum_probs=32.3
Q ss_pred CCCCCccceeeCCceEEEEEEecCCcEEEEEEEecCCCceeeEEE
Q 008826 484 DRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQI 528 (552)
Q Consensus 484 ~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~ 528 (552)
.++|+|+++|..+|||++|+|.|+|||+|+|+++.|+ +|+|+|
T Consensus 20 ~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g--~v~D~f 62 (62)
T PF14008_consen 20 YPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDG--SVLDEF 62 (62)
T ss_dssp SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS---T-CEE-
T ss_pred CCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCC--cEecCC
Confidence 4679999999999999999999999999999999887 899997
No 26
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.52 E-value=1.3e-13 Score=135.13 Aligned_cols=187 Identities=20% Similarity=0.202 Sum_probs=114.1
Q ss_pred ceEEEEEeCCCCCCC-----hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 198 ~~rfavigD~~~~~~-----~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
++||++++|+|.... ..+.++.+.+.+||+|+++||+++.. .. .. +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~------~~------------------~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGS------VD------------------VL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCc------ch------------------hh-HHHHH
Confidence 479999999998753 24556666778999999999999531 10 01 34556
Q ss_pred HHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHH
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 352 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~ 352 (552)
.++.+....|+++++||||+...... .+........+. ...+.+..++.++..+.++.-.. .....+++.
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~-~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~ 125 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEE-NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLE 125 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchH-HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHH
Confidence 66777677999999999998643211 101121111111 12334555666665554443111 122334566
Q ss_pred HHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc----------
Q 008826 353 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT---------- 422 (552)
Q Consensus 353 ~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~---------- 422 (552)
+.+++.+ ...+.|++.|.|.+.. .+.+.++|++++||+|..+...|.....
T Consensus 126 ~~~~~~~--~~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~ 186 (223)
T cd07385 126 KALKGLD--EDDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYD 186 (223)
T ss_pred HHHhCCC--CCCCEEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCccc
Confidence 7776653 3346899999885321 1156799999999999998776543210
Q ss_pred ----cCCCCcEEEEECCCCC
Q 008826 423 ----LDPCGPVHITIGDGGN 438 (552)
Q Consensus 423 ----~~~~G~vyiv~G~gG~ 438 (552)
...+..+||+.|.|..
T Consensus 187 ~G~~~~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 187 YGLYRKGGSQLYVSRGLGTW 206 (223)
T ss_pred ceEEEECCEEEEEcCCccCC
Confidence 1133467777777664
No 27
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.48 E-value=1.4e-13 Score=128.88 Aligned_cols=144 Identities=20% Similarity=0.287 Sum_probs=87.3
Q ss_pred EEEEeCCCCCCChHHHH--HHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhh
Q 008826 201 IAIVGDLGLTYNTTCTI--NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (552)
Q Consensus 201 favigD~~~~~~~~~~l--~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 278 (552)
|+++||+|.+....... +.+.+.++|+++++||+++. +. ...+.. ......
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~------~~------------------~~~~~~---~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYL------TD------------------APRFAP---LLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCC------cc------------------hHHHHH---HHHhhc
Confidence 57899999875433222 23445789999999999952 11 011211 233344
Q ss_pred hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCC-cHHHHHHHHHHHhc
Q 008826 279 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK-SGHQYKWLEKDLAN 357 (552)
Q Consensus 279 ~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~-~~~Q~~WL~~~L~~ 357 (552)
...|+++++||||+. +.|+...-..++.. ..++.+|+.++++
T Consensus 54 ~~~~v~~v~GNHD~~------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~- 96 (166)
T cd07404 54 GFEPVIYVPGNHEFY------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR- 96 (166)
T ss_pred CCccEEEeCCCcceE------------------------------------EEEEeeecccccCccchHHHHhCCCCCC-
Confidence 678999999999984 22222221112211 2345566655554
Q ss_pred ccCCCCCEEEEEcCCCcccCCCCCC---c-hhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 008826 358 VDRSVTPWLVATWHPPWYSSYSSHY---R-EAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (552)
Q Consensus 358 ~~r~~~~w~Iv~~H~P~y~s~~~~~---~-~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 414 (552)
+.+||++|+|+........ . .....++.+..++++++|+++++||+|....
T Consensus 97 ------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 97 ------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred ------CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 2367888888766532211 1 1123456677888899999999999997643
No 28
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.47 E-value=9.3e-13 Score=133.38 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=98.2
Q ss_pred ceEEEEEeCCCCCCC-----hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 198 ~~rfavigD~~~~~~-----~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
++||+++||+|.... ..+.++.+.+.+||+|+++||+++.+ . ...++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~------~------------------~~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFD------M------------------PLNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCC------c------------------cccHHHHHH
Confidence 699999999998632 23455666678999999999998421 1 012345667
Q ss_pred HHHHhhhcCCeEEecCCchhccccc-CcchHHhhhhcCCCCCCCCCCCcceEEEEcCe--EEEEEecccccCCCcHHHHH
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEESGSLSSFYYSFNAGG--IHFIMLGAYISYDKSGHQYK 349 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~--v~fI~Ldt~~~~~~~~~Q~~ 349 (552)
.++.+.+..|+++|+||||+..... ...+....+.-.+ .-..+....+..++ +.++.+|........
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~~~~~----- 174 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWAGQCK----- 174 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhccCCC-----
Confidence 7777777789999999999853211 1112222111111 11234455555553 556666532111100
Q ss_pred HHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeec
Q 008826 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 418 (552)
Q Consensus 350 WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv 418 (552)
..+.+++ + ...|++.|.|-+- +.+.+.++|++||||+|.-|...|.
T Consensus 175 -~~~~~~~----~-~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 175 -PPPASEA----N-LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred -hhHhcCC----C-CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 1112222 2 2478899999431 1234578999999999998887664
No 29
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.47 E-value=2.9e-12 Score=125.42 Aligned_cols=169 Identities=14% Similarity=0.197 Sum_probs=102.8
Q ss_pred ceEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+.||+++||+|..... .+.++.+.+.++|+|+++||+++. |. ..+.+.++++.
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~--------------------~~~~~~~~l~~ 57 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AA--------------------KSEDYAAFFRI 57 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CC--------------------CHHHHHHHHHH
Confidence 6799999999975332 334444445789999999999952 21 01223344444
Q ss_pred hh-hcCCeEEecCCchhcccccCcchHHhhhhcC----CCCCCCCCCCcceEEEEc-CeEEEEEecccccC--CCcHHHH
Q 008826 277 LV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEESGSLSSFYYSFNA-GGIHFIMLGAYISY--DKSGHQY 348 (552)
Q Consensus 277 l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~~~~~~~~yYsf~~-G~v~fI~Ldt~~~~--~~~~~Q~ 348 (552)
+. ..+|+++++||||... .....+.|. .|.. ......+ ..+ |+++|+.|+....+ ..+++|.
T Consensus 58 l~~l~~pv~~V~GNhD~~v------~~~l~~~~~~~~~~p~~--~~lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~ 127 (224)
T cd07388 58 LGEAHLPTFYVPGPQDAPL------WEYLREAYNAELVHPEI--RNVHETF--AFWRGPYLVAGVGGEIADEGEPEEHEA 127 (224)
T ss_pred HHhcCCceEEEcCCCChHH------HHHHHHHhcccccCccc--eecCCCe--EEecCCeEEEEecCCcCCCCCcCHHHH
Confidence 42 2589999999999631 111111221 1210 0011122 334 56999999975433 2355552
Q ss_pred ----HHHHH----HHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEcccc
Q 008826 349 ----KWLEK----DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410 (552)
Q Consensus 349 ----~WL~~----~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 410 (552)
+||.+ .|.+. ..+..|+++|.|++.....|.. ...+..++++++..+++|||+|
T Consensus 128 ~~~~~~~~~~~l~~~~~~---~~~~~VLv~H~PP~g~g~~h~G-----S~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 128 LRYPAWVAEYRLKALWEL---KDYRKVFLFHTPPYHKGLNEQG-----SHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhhhhhHHHHHHHHHHhC---CCCCeEEEECCCCCCCCCCccC-----HHHHHHHHHHhCCCEEEEcCCc
Confidence 56433 33332 2335899999999987433322 3577889999999999999999
No 30
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.46 E-value=6.4e-13 Score=129.81 Aligned_cols=185 Identities=16% Similarity=0.157 Sum_probs=106.6
Q ss_pred EEEEEeCCCCCCC----------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 200 RIAIVGDLGLTYN----------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 200 rfavigD~~~~~~----------------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
||++++|+|++.. ..++++.+.+.+||+|+++||+++... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 6899999998743 133445555679999999999985321 00
Q ss_pred HHHHHHHHHHHHHhh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCC--CCCCCCcceEEEEcCeEEEEEeccccc
Q 008826 264 QPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE--ESGSLSSFYYSFNAGGIHFIMLGAYIS 340 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~--~~~~~~~~yYsf~~G~v~fI~Ldt~~~ 340 (552)
...+..+.+.++.+. ..+|+++++||||....... ............. ...........++.+++.|+.++....
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~ 136 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR 136 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccccc--ccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH
Confidence 134556667777664 58999999999998743221 1111111000000 000011223334455688888875422
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 341 YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 341 ~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
. ....+.+++++.+.+.. .....|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 137 ~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 137 S-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred H-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 1 12344455555555543 34468999999976543221110 123334456779999999999987543
No 31
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.43 E-value=1.8e-11 Score=122.65 Aligned_cols=256 Identities=22% Similarity=0.280 Sum_probs=142.9
Q ss_pred CceEEEEEeCCCCCCC--------------------hHHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCC
Q 008826 197 YPKRIAIVGDLGLTYN--------------------TTCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255 (552)
Q Consensus 197 ~~~rfavigD~~~~~~--------------------~~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~ 255 (552)
.+|||+.++|+|.+.. ....+++++ .++||||+++||+++... .
T Consensus 52 g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~-----t---------- 116 (379)
T KOG1432|consen 52 GTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS-----T---------- 116 (379)
T ss_pred CceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc-----c----------
Confidence 3799999999998642 234566665 479999999999996421 0
Q ss_pred CCccccccHHHHHHHHHHHHHh-hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC--CC-CCcceEEEEcCe--
Q 008826 256 KTPIHETYQPRWDYWGRFMQNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES--GS-LSSFYYSFNAGG-- 329 (552)
Q Consensus 256 ~~~~~e~y~~~wd~~~~~l~~l-~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~--~~-~~~~yYsf~~G~-- 329 (552)
+..-..+++.++|. ..+|||.++.||||-+..........+... +|..-+ .. .+..+--..+|+
T Consensus 117 --------~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn 186 (379)
T KOG1432|consen 117 --------QDAATSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYN 186 (379)
T ss_pred --------HhHHHHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhc--CCCccccCCCcccceeeeecccceE
Confidence 11113455666665 689999999999998755433333333222 222110 00 011110111121
Q ss_pred ----------------EEEEEeccccc---------C-CCcHHHHHHHHHHHhc---ccCCCCC-EEEEEcCCCcc--cC
Q 008826 330 ----------------IHFIMLGAYIS---------Y-DKSGHQYKWLEKDLAN---VDRSVTP-WLVATWHPPWY--SS 377 (552)
Q Consensus 330 ----------------v~fI~Ldt~~~---------~-~~~~~Q~~WL~~~L~~---~~r~~~~-w~Iv~~H~P~y--~s 377 (552)
..+++||+..+ | .....|.+||+..-++ .+..-.| --++++|.|+- ..
T Consensus 187 ~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~ 266 (379)
T KOG1432|consen 187 LQIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLE 266 (379)
T ss_pred EEeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhh
Confidence 23455555321 1 1257899999987733 1112223 36788899873 21
Q ss_pred CCC------CCchh---HHHHHHHHHHHH-HcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccC
Q 008826 378 YSS------HYREA---ECMRVEMEALLY-SYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHA 447 (552)
Q Consensus 378 ~~~------~~~~~---~~~r~~l~~ll~-~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~ 447 (552)
... ..++. ......+...|. ..+|+.|++||.|.-.-..+. .|.+++.=|+|+..-+..
T Consensus 267 ~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~-------k~~~wlCygGgaGyggYg---- 335 (379)
T KOG1432|consen 267 LESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGEL-------KGELWLCYGGGAGYGGYG---- 335 (379)
T ss_pred ccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceeccc-------CCeEEEEecCCCccCCcC----
Confidence 111 11111 111235556666 779999999999986655432 344666555544321110
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEe-cCCcEEEEEEEecCCCceeeE
Q 008826 448 DEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVK-NETWALWTWHRNQDSNNKVGD 526 (552)
Q Consensus 448 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~-n~t~~~~~~~~~~d~~~~v~D 526 (552)
++-| .| +--++++. ++..+ -+|.|.+|...++.|
T Consensus 336 --------------------------------------~~gw--~R----r~Rv~e~d~~~~~I-kTWKRl~d~~~~~~D 370 (379)
T KOG1432|consen 336 --------------------------------------IGGW--ER----RARVFELDLNKDRI-KTWKRLDDKPLSVID 370 (379)
T ss_pred --------------------------------------cCCc--cc----ceEEEEcccccccc-ceeeecCCCCcceee
Confidence 0111 11 23455554 44444 489999999888889
Q ss_pred EEEEEeC
Q 008826 527 QIYIVRQ 533 (552)
Q Consensus 527 ~~~i~k~ 533 (552)
.-.+.+.
T Consensus 371 ~q~l~d~ 377 (379)
T KOG1432|consen 371 YQLLYDG 377 (379)
T ss_pred eEEEecc
Confidence 8877654
No 32
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.41 E-value=4.5e-12 Score=133.02 Aligned_cols=93 Identities=19% Similarity=0.261 Sum_probs=67.2
Q ss_pred CcceEEEE-cCeE--EEEEeccccc-----------CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCC---
Q 008826 319 SSFYYSFN-AGGI--HFIMLGAYIS-----------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH--- 381 (552)
Q Consensus 319 ~~~yYsf~-~G~v--~fI~Ldt~~~-----------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~--- 381 (552)
+..||+|+ .|++ |+|+||+... .....+|++||+++|+.... +.+++|+++|+|+.+.....
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 34599999 5855 9999998631 12468999999999998753 45789999999987622111
Q ss_pred Cc----------hhHHHHHHHHHHHHHc-CCcEEEEccccCc
Q 008826 382 YR----------EAECMRVEMEALLYSY-GVDIVFNGHVHAY 412 (552)
Q Consensus 382 ~~----------~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 412 (552)
+. +......+|..+|.+| +|.++|+||.|.-
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 11 0011124899999999 6999999999963
No 33
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.30 E-value=2.3e-11 Score=107.08 Aligned_cols=116 Identities=28% Similarity=0.483 Sum_probs=82.1
Q ss_pred EEEeCCCCCCChHHHH---HHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhh
Q 008826 202 AIVGDLGLTYNTTCTI---NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (552)
Q Consensus 202 avigD~~~~~~~~~~l---~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 278 (552)
+++||+|......... ....+.++|+|+++||+++. +.. ..+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~------~~~------------------~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGD------GPD------------------PEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCC------CCC------------------chHHHHHHHHHhhc
Confidence 4789999886543332 34456799999999999963 211 12222222333446
Q ss_pred hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhcc
Q 008826 279 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 358 (552)
Q Consensus 279 ~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~ 358 (552)
...|++.++||||
T Consensus 57 ~~~~~~~~~GNHD------------------------------------------------------------------- 69 (131)
T cd00838 57 LGIPVYVVPGNHD------------------------------------------------------------------- 69 (131)
T ss_pred CCCCEEEeCCCce-------------------------------------------------------------------
Confidence 7899999999999
Q ss_pred cCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008826 359 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 416 (552)
Q Consensus 359 ~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~ 416 (552)
|++.|.|++.............+..+..++.+.+++++|+||.|.+.+..
T Consensus 70 --------i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 --------ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 88889998776433222222256788899999999999999999998874
No 34
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=99.25 E-value=1.2e-10 Score=114.80 Aligned_cols=178 Identities=20% Similarity=0.222 Sum_probs=113.5
Q ss_pred EEEEEeCCCCCCChHHHHHHHH----hCCCCEEEEcCCcccccccccCCCCCC--CCcCCCCCCccccccHHHHHHHH--
Q 008826 200 RIAIVGDLGLTYNTTCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSD--CYSCSFSKTPIHETYQPRWDYWG-- 271 (552)
Q Consensus 200 rfavigD~~~~~~~~~~l~~l~----~~~pDfvl~~GDl~Y~d~~~~~G~~~~--cy~~~~~~~~~~e~y~~~wd~~~-- 271 (552)
||++.||.+...........+. +.+||++|++||.+|++.......... --..........+.|+.++..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5889999887765555555554 789999999999999874311000000 00000001223345555555543
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccC----------------cchHHhhhhcCCCCCCCC--CCCcceEEEEcCeE-EE
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGN----------------QTFVAYSSRFAFPSEESG--SLSSFYYSFNAGGI-HF 332 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~----------------~~f~~y~~~f~~P~~~~~--~~~~~yYsf~~G~v-~f 332 (552)
..++.+.+++|++.++.+||+.++.+. .....|......+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 346777889999999999999876443 122345554444433322 34678999999996 99
Q ss_pred EEecccccCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCC--cEEEEcccc
Q 008826 333 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGV--DIVFNGHVH 410 (552)
Q Consensus 333 I~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~V--dlvlsGH~H 410 (552)
|+||++... ..|......|+++..++.+.++ -++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998653 3344445567788887666643 489999999
Q ss_pred Cceee
Q 008826 411 AYERS 415 (552)
Q Consensus 411 ~yeR~ 415 (552)
..+..
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 65544
No 35
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.20 E-value=5.9e-10 Score=109.64 Aligned_cols=195 Identities=21% Similarity=0.211 Sum_probs=101.4
Q ss_pred eEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhh
Q 008826 199 KRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (552)
Q Consensus 199 ~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 278 (552)
+||+++||+|..... ...+.+.+.+||+|+++||++.. . ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~-------~----------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE-------S----------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC-------h----------------------HHHHHHHHhC-
Confidence 589999999976443 33456667799999999999831 0 1223333333
Q ss_pred hcCCeEEecCCchhcccccC-cchHHhhhhcCCCCCCCCCCCcceEE---EEcCeEEEEEeccccc--------------
Q 008826 279 SKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYS---FNAGGIHFIMLGAYIS-------------- 340 (552)
Q Consensus 279 ~~iP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYs---f~~G~v~fI~Ldt~~~-------------- 340 (552)
..|++++.||||....... .....+.+....- +..... .++....+.+..++..
T Consensus 50 -~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~l-------g~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr 121 (238)
T cd07397 50 -PLPKAVILGNHDAWYDATFRKKGDRVQEQLELL-------GDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVK 121 (238)
T ss_pred -CCCeEEEcCCCcccccccccchHHHHHHHHHHh-------CCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHH
Confidence 4799999999998653211 0122233322111 111111 1222222222332210
Q ss_pred --C--CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCC-------------CchhHHHHHHHHHHHHHcCCcE
Q 008826 341 --Y--DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH-------------YREAECMRVEMEALLYSYGVDI 403 (552)
Q Consensus 341 --~--~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~-------------~~~~~~~r~~l~~ll~~~~Vdl 403 (552)
| ..-.+-.+.+-+.++..+. ..+ .|++.|.++....+.. ......+++++..+-.+-.+++
T Consensus 122 ~~fgi~s~~eA~~~ive~~~~~~~-~~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l 199 (238)
T cd07397 122 AVYGVISLEESAQRIIAAAKKAPP-DLP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPL 199 (238)
T ss_pred HHhCCCCHHHHHHHHHHHhhhcCC-CCC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCE
Confidence 1 0112223444444443332 223 6888898886653111 1123455666655543335899
Q ss_pred EEEccccCceeeee-ccc-cccCCCCcEEEEEC
Q 008826 404 VFNGHVHAYERSNR-VFN-YTLDPCGPVHITIG 434 (552)
Q Consensus 404 vlsGH~H~yeR~~p-v~n-~~~~~~G~vyiv~G 434 (552)
+++||+|.--|... ... ...+..|++|+...
T Consensus 200 ~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a 232 (238)
T cd07397 200 VVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAA 232 (238)
T ss_pred EEeCCccCcccccccccceeeecCCCeEEEecc
Confidence 99999996533211 100 11356799998543
No 36
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.19 E-value=1.7e-10 Score=104.28 Aligned_cols=117 Identities=18% Similarity=0.207 Sum_probs=74.4
Q ss_pred EEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhh
Q 008826 200 RIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 279 (552)
Q Consensus 200 rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~ 279 (552)
||+++||+|.... .+...++|+++++||++.. +. ...++.+.+.++.+.
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~~- 49 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSLP- 49 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhCC-
Confidence 5899999997744 2344689999999999842 21 123344555555542
Q ss_pred cCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhccc
Q 008826 280 KVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 359 (552)
Q Consensus 280 ~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 359 (552)
..++++++||||.... .
T Consensus 50 ~~~~~~v~GNHD~~~~--------------------------------------------------------------~- 66 (135)
T cd07379 50 HPHKIVIAGNHDLTLD--------------------------------------------------------------P- 66 (135)
T ss_pred CCeEEEEECCCCCcCC--------------------------------------------------------------C-
Confidence 1235789999996310 1
Q ss_pred CCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 360 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 360 r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
. .+.|++.|.|++............-.+.+.+++.+++++++|+||+|...
T Consensus 67 -~--~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 -E--DTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred -C--CCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 1 23677889888765422111011112466777788999999999999764
No 37
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.18 E-value=2.6e-10 Score=104.84 Aligned_cols=138 Identities=25% Similarity=0.381 Sum_probs=80.7
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+||+++||+|..... .+.++.+ +++|+|+++||++.. .++.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 699999999986432 3455555 579999999999831 2334444433
Q ss_pred hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhc
Q 008826 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 357 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~ 357 (552)
|++++.||||... +....... + +.+.+..
T Consensus 49 ----~~~~v~GNHD~~~---------~~~~~~~~----------~----------------------------~~~~~~~ 77 (156)
T PF12850_consen 49 ----PVYVVRGNHDNWA---------FPNENDEE----------Y----------------------------LLDALRL 77 (156)
T ss_dssp ----EEEEE--CCHSTH---------HHSEECTC----------S----------------------------SHSEEEE
T ss_pred ----CEEEEeCCccccc---------chhhhhcc----------c----------------------------cccceee
Confidence 8999999999531 11111000 0 0000000
Q ss_pred ccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCC
Q 008826 358 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 358 ~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG 437 (552)
......|++.|...+.... ..+.+..++...+++++|+||+|...... .+|+.++..|+-+
T Consensus 78 ---~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~ 138 (156)
T PF12850_consen 78 ---TIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIG 138 (156)
T ss_dssp ---EETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSS
T ss_pred ---eecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCC
Confidence 1123477777876654321 12345677788999999999999877753 3578888888765
Q ss_pred C
Q 008826 438 N 438 (552)
Q Consensus 438 ~ 438 (552)
.
T Consensus 139 ~ 139 (156)
T PF12850_consen 139 G 139 (156)
T ss_dssp S
T ss_pred C
Confidence 5
No 38
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.13 E-value=5.5e-10 Score=113.30 Aligned_cols=76 Identities=21% Similarity=0.307 Sum_probs=58.0
Q ss_pred CceEEEEEeCCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHH
Q 008826 197 YPKRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (552)
Q Consensus 197 ~~~rfavigD~~~~~~~---~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~ 273 (552)
..+||++++|+|..... .+.+.++....||+|+++||+++.+ . .+.+..+.+.
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~------~------------------~~~~~~~~~~ 98 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD------R------------------PPGVAALALF 98 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC------C------------------CCCHHHHHHH
Confidence 36899999999987554 2345555567889999999999520 0 1234667888
Q ss_pred HHHhhhcCCeEEecCCchhcccc
Q 008826 274 MQNLVSKVPIMVVEGNHEIEAQA 296 (552)
Q Consensus 274 l~~l~~~iP~~~v~GNHD~~~~~ 296 (552)
+++|.+..+++++.||||+....
T Consensus 99 L~~L~~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 99 LAKLKAPLGVFAVLGNHDYGVDR 121 (284)
T ss_pred HHhhhccCCEEEEeccccccccc
Confidence 89999999999999999997543
No 39
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.07 E-value=1.6e-09 Score=107.96 Aligned_cols=197 Identities=17% Similarity=0.207 Sum_probs=104.4
Q ss_pred eEEEEEeCCCCCCChH----HHHHHHH--hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNTT----CTINHMS--SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 199 ~rfavigD~~~~~~~~----~~l~~l~--~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
+|++++||+|++.... ..++.+. +.+||+|+++||+++. | .|... ..+......+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~--~g~~~---------------~~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--W--IGDDD---------------PSPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--c--cccCc---------------CCHHHHHHHH
Confidence 4799999999875432 2333332 3589999999999942 1 11100 0122234556
Q ss_pred HHHHhhhc-CCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHH
Q 008826 273 FMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 351 (552)
Q Consensus 273 ~l~~l~~~-iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL 351 (552)
.++.+... +|++.++||||.... ..+.+...+.. . .....+++++.++++.-.-.. ......++++
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~~~------~~~~~~~g~~~-----l-~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~ 128 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFLLG------KRFAKAAGMTL-----L-PDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRF 128 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchhhh------HHHHHhCCCEE-----e-CCcEEEEECCEEEEEECCccc-ccCCHHHHHH
Confidence 66666544 899999999997421 12222221110 1 123346777877777654321 1233455555
Q ss_pred HHHHhcccCCCCCEEEEEcCCCcccCCCC-------------C--Cc-hhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 352 EKDLANVDRSVTPWLVATWHPPWYSSYSS-------------H--YR-EAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 352 ~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~-------------~--~~-~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
++.+.+. |....+|.+++..... . .. -.....+.+.+++.+++++++++||+|.-...
T Consensus 129 r~~~r~~------~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 202 (241)
T PRK05340 129 RRKVRNP------WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIH 202 (241)
T ss_pred HHHHhCH------HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCccee
Confidence 5554431 1222222222211000 0 00 00001246778889999999999999976543
Q ss_pred eeccccccCCCCcEEEEECCCC
Q 008826 416 NRVFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 416 ~pv~n~~~~~~G~vyiv~G~gG 437 (552)
. +.+ +..+..|++.|+..
T Consensus 203 ~-~~~---~~~~~~~~~lgdw~ 220 (241)
T PRK05340 203 Q-LQA---GGQPATRIVLGDWH 220 (241)
T ss_pred e-ccC---CCcceEEEEeCCCC
Confidence 2 111 11124688888874
No 40
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.95 E-value=5.2e-09 Score=99.85 Aligned_cols=110 Identities=17% Similarity=0.346 Sum_probs=70.1
Q ss_pred HHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh---hhcCCeEEecCCchhcccc
Q 008826 220 MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL---VSKVPIMVVEGNHEIEAQA 296 (552)
Q Consensus 220 l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l---~~~iP~~~v~GNHD~~~~~ 296 (552)
+...+||+|+++||+++. |... -..+|.+..+.+.++ ...+|++.++||||++...
T Consensus 38 ~~~l~PD~Vi~lGDL~D~------G~~~---------------~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~ 96 (195)
T cd08166 38 LNFVQPDIVIFLGDLMDE------GSIA---------------NDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEE 96 (195)
T ss_pred HhccCCCEEEEeccccCC------CCCC---------------CHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCC
Confidence 334689999999999953 3311 023344433333333 3568999999999997432
Q ss_pred cCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCccc
Q 008826 297 GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYS 376 (552)
Q Consensus 297 ~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~ 376 (552)
.... ..-.+||. .+| |++.|.|...
T Consensus 97 ~~~~-~~~v~RF~-----------~~F-------------------------------------------i~lsH~P~~~ 121 (195)
T cd08166 97 EDPI-ESKIRRFE-----------KYF-------------------------------------------IMLSHVPLLA 121 (195)
T ss_pred CCcC-HHHHHHHH-----------Hhh-------------------------------------------eeeecccccc
Confidence 2111 22223331 011 8899999865
Q ss_pred CCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 377 SYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 377 s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
... ..+..++.+++++++|+||.|.+.+.
T Consensus 122 ~~~----------~~~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 122 EGG----------QALKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred ccc----------HHHHHHHHhcCceEEEEcCccceeeE
Confidence 321 25677888999999999999987665
No 41
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.92 E-value=1.8e-08 Score=108.49 Aligned_cols=180 Identities=18% Similarity=0.288 Sum_probs=108.1
Q ss_pred HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCch
Q 008826 214 TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHE 291 (552)
Q Consensus 214 ~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD 291 (552)
.+++++|.++ ++|+|+++||++-.+.|. ...+..-.......+.|.+....+|++++.||||
T Consensus 198 es~L~~ike~~~~iD~I~wTGD~~~H~~w~----------------~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe 261 (577)
T KOG3770|consen 198 ESALDHIKENHKDIDYIIWTGDNVAHDVWA----------------QTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHE 261 (577)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCcccchh----------------hhHHHHHHHHHHHHHHHHHhCCCCceeeecccCC
Confidence 3467777754 489999999999544221 1111111222334455667778999999999999
Q ss_pred hccccc-------Cc-----chHHhhhhc--CCCCCC-CCCCCcceEEE-EcCeEEEEEecccccC----------CCcH
Q 008826 292 IEAQAG-------NQ-----TFVAYSSRF--AFPSEE-SGSLSSFYYSF-NAGGIHFIMLGAYISY----------DKSG 345 (552)
Q Consensus 292 ~~~~~~-------~~-----~f~~y~~~f--~~P~~~-~~~~~~~yYsf-~~G~v~fI~Ldt~~~~----------~~~~ 345 (552)
...... .. .|..+...| -+|.+. .....+.+|.- -.+|.++|+||+..-+ ....
T Consensus 262 ~~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~ 341 (577)
T KOG3770|consen 262 IHPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPI 341 (577)
T ss_pred CCcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCch
Confidence 874311 01 112222222 133321 12334556654 4689999999985322 2367
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccCceee
Q 008826 346 HQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAYERS 415 (552)
Q Consensus 346 ~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~yeR~ 415 (552)
.|++|+..+|..++.++.+ |=++.|.|.-.. ... +.....+-.++.++. +...|.||.|.-+-.
T Consensus 342 ~~lqWf~~~L~~ae~~Gek-Vhil~HIPpG~~---~c~--~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 342 DQLQWFVDQLQEAESAGEK-VHILGHIPPGDG---VCL--EGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HHhhHHHHHHHHHHhcCCE-EEEEEeeCCCCc---chh--hhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 8899999999998654433 667889997542 111 122334556666663 566899999976543
No 42
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.92 E-value=8e-09 Score=95.39 Aligned_cols=56 Identities=20% Similarity=0.147 Sum_probs=37.2
Q ss_pred EEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
+|++.|.+....... . + . ..++.+.++|++++||+|...... .++++++..|+.|.
T Consensus 77 ~i~v~Hg~~~~~~~~----~---~-~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 132 (155)
T cd00841 77 RIFLTHGHLYGVKNG----L---D-R-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSL 132 (155)
T ss_pred EEEEECCcccccccc----h---h-h-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccC
Confidence 677778776543211 0 1 1 455677899999999999764432 24788888888765
No 43
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.91 E-value=6.3e-09 Score=96.65 Aligned_cols=52 Identities=29% Similarity=0.547 Sum_probs=33.8
Q ss_pred HhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh-h--hcCCeEEecCCchhc
Q 008826 221 SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL-V--SKVPIMVVEGNHEIE 293 (552)
Q Consensus 221 ~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l-~--~~iP~~~v~GNHD~~ 293 (552)
.+.+||+|+++||++.. +.. .. ...|..+...+..+ . ..+|++.++||||..
T Consensus 35 ~~~~pd~vv~~GDl~~~------~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 35 WLLQPDVVFVLGDLFDE------GKW--------------ST-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HhcCCCEEEECCCCCCC------Ccc--------------CC-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 35789999999999953 110 00 13455544433333 2 258999999999984
No 44
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.87 E-value=2.6e-08 Score=92.49 Aligned_cols=61 Identities=21% Similarity=0.347 Sum_probs=41.9
Q ss_pred eEEEEEeCCCCCCChHH-HHHHHHhC-CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNTTC-TINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 199 ~rfavigD~~~~~~~~~-~l~~l~~~-~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+||+++||+|......+ .++.+... ++|.|+++||++.. ...+.++.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~-------------------------------~~~~~l~~ 49 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTSP-------------------------------FVLKEFED 49 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCCH-------------------------------HHHHHHHH
Confidence 58999999997654333 33444455 89999999999710 12233333
Q ss_pred hhhcCCeEEecCCchh
Q 008826 277 LVSKVPIMVVEGNHEI 292 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~ 292 (552)
+ ..|++.|.||||.
T Consensus 50 ~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 50 L--AAKVIAVRGNNDG 63 (158)
T ss_pred h--CCceEEEccCCCc
Confidence 2 4589999999996
No 45
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.87 E-value=2.8e-07 Score=87.51 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=29.6
Q ss_pred HHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 391 ~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
.+..++++.++|++++||+|...... .+|.+++..|+.|.
T Consensus 97 ~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~ 136 (178)
T cd07394 97 SLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATG 136 (178)
T ss_pred HHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCC
Confidence 34455667889999999999754432 24788898898774
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.86 E-value=1.5e-08 Score=91.01 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=31.3
Q ss_pred EEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
.|+++|+|++...... .......+.+.+++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 4667777766432211 000112457778888999999999999965443
No 47
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.83 E-value=3.7e-08 Score=92.91 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=25.8
Q ss_pred EEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008826 367 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 416 (552)
Q Consensus 367 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~ 416 (552)
|++.|.|.+. ++.+.+++++|+||+|.+-+..
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~~~~~ 150 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQCEVV 150 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCCeEEE
Confidence 8899998631 5677899999999999986654
No 48
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.83 E-value=4.3e-08 Score=93.87 Aligned_cols=194 Identities=22% Similarity=0.318 Sum_probs=88.9
Q ss_pred ceEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCc-----CCCCC-Ccccc--ccHH-HH
Q 008826 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS-----CSFSK-TPIHE--TYQP-RW 267 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~-----~~~~~-~~~~e--~y~~-~w 267 (552)
+-|++.++|.+..... .+.+..+.+.+||+|+++||+.-. ....+.|. ...|+ ..+.+ .|+. ..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~------~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKA------EARSDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-T------CHHHHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEecccccc------chhhhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 4589999999865332 344555556799999999999832 11110010 00000 00000 0000 01
Q ss_pred HHHHHHHHHhhhcCCeEEecCCchhcccccCcch-HHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC-CC--
Q 008826 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTF-VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-DK-- 343 (552)
Q Consensus 268 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f-~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~-~~-- 343 (552)
+.+++.+.. ..+|++++|||||.... ..+ .+|....-.|.-- .-...+.+.-|..-|+.+..+... ..
T Consensus 79 ~~ff~~L~~--~~~p~~~vPG~~Dap~~---~~lr~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~~~ 150 (255)
T PF14582_consen 79 DKFFRILGE--LGVPVFVVPGNMDAPER---FFLREAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQREE 150 (255)
T ss_dssp HHHHHHHHC--C-SEEEEE--TTS-SHH---HHHHHHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-BC
T ss_pred HHHHHHHHh--cCCcEEEecCCCCchHH---HHHHHHhccceecccee---eeeeeecccCCcEEEEecCccccCCCccc
Confidence 133333433 58999999999998421 011 1222111122100 001123344455888888765321 11
Q ss_pred ------cHHHHHHHHHHHhcccCCCCCEEEEEcCCCc-ccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 344 ------SGHQYKWLEKDLANVDRSVTPWLVATWHPPW-YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 344 ------~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~-y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
.....+|..+.|..++ ..-+|+.+|.|+ +.....+.. .+++.+++++|+.++||+||+|--.
T Consensus 151 ~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 151 EFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp SSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred cccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEecccccch
Confidence 2234455566666653 223788899998 443322322 2578899999999999999999643
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.82 E-value=1e-07 Score=94.26 Aligned_cols=73 Identities=15% Similarity=0.312 Sum_probs=47.2
Q ss_pred EEEeCCCCCCCh----HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 202 AIVGDLGLTYNT----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 202 avigD~~~~~~~----~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
+++||+|.+... ...++.+.+ .+||+|+++||+++ .|. |... . ....+.+.+.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d--~~~--~~~~------------~---~~~~~~~~~~l~ 62 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFE--AWI--GDDD------------P---STLARSVAQAIR 62 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceec--ccc--CCCC------------C---CHHHHHHHHHHH
Confidence 689999987532 234555544 37999999999994 221 1100 0 112234556666
Q ss_pred Hhhh-cCCeEEecCCchhc
Q 008826 276 NLVS-KVPIMVVEGNHEIE 293 (552)
Q Consensus 276 ~l~~-~iP~~~v~GNHD~~ 293 (552)
.+.. .+|+++++||||..
T Consensus 63 ~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 63 QVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred HHHHCCCeEEEEcCCCchh
Confidence 6654 58999999999985
No 50
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.77 E-value=1.6e-07 Score=90.32 Aligned_cols=191 Identities=18% Similarity=0.247 Sum_probs=112.8
Q ss_pred ceEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 198 ~~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
.+|+++++|+|.... ..+.++.+...++|+++.+||++|.+ .|... ..-+.. + ++.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~~-------------~~~~~~---~---~e~ 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPKE-------------VAEELN---K---LEA 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCchH-------------HHHhhh---H---HHH
Confidence 589999999998754 34455555567999999999999542 22210 000000 1 344
Q ss_pred hh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccc------cCCCcHHH-H
Q 008826 277 LV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI------SYDKSGHQ-Y 348 (552)
Q Consensus 277 l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~------~~~~~~~Q-~ 348 (552)
+. ..+|+++++||-|... ......+ ....- .+ -+.+.+++.|+.+.... .+..++++ +
T Consensus 60 l~~~~~~v~avpGNcD~~~-----v~~~l~~-~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 60 LKELGIPVLAVPGNCDPPE-----VIDVLKN-AGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred HHhcCCeEEEEcCCCChHH-----HHHHHHh-ccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 43 6899999999987631 1111111 11111 11 56778888888865321 11223333 4
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCC
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G 427 (552)
.-|++-+++.+... .|+.+|.|+|......... ...-...+.+++++.++-+.++||+|-+.-.-. -+.
T Consensus 126 s~l~~~v~~~~~~~---~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-------iG~ 195 (226)
T COG2129 126 SKLKSLVKKADNPV---NILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-------IGN 195 (226)
T ss_pred HHHHHHHhcccCcc---eEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccccccc-------cCC
Confidence 45555555543221 3899999999875442222 122346788899999999999999997433311 234
Q ss_pred cEEEEECC
Q 008826 428 PVHITIGD 435 (552)
Q Consensus 428 ~vyiv~G~ 435 (552)
++.|.-|.
T Consensus 196 TivVNPG~ 203 (226)
T COG2129 196 TIVVNPGP 203 (226)
T ss_pred eEEECCCC
Confidence 66665555
No 51
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.71 E-value=1.3e-07 Score=94.54 Aligned_cols=192 Identities=16% Similarity=0.138 Sum_probs=98.8
Q ss_pred eEEEEEeCCCCCC-------Ch---HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHH
Q 008826 199 KRIAIVGDLGLTY-------NT---TCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 267 (552)
Q Consensus 199 ~rfavigD~~~~~-------~~---~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~w 267 (552)
++|++++|+|... +. ...++++.+.+|| +++.+||++....... + ...
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~--------------------~-~~~ 59 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST--------------------A-TKG 59 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh--------------------c-cCC
Confidence 4899999999553 12 3466777777788 7899999985321100 0 001
Q ss_pred HHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCC---C----C---CCCCCcceEEEEcCeEEEEE--e
Q 008826 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPS---E----E---SGSLSSFYYSFNAGGIHFIM--L 335 (552)
Q Consensus 268 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~---~----~---~~~~~~~yYsf~~G~v~fI~--L 335 (552)
....+.++.+ -.-++++||||+... ...+.........|. + + .......|..++.+++++-+ +
T Consensus 60 ~~~~~~l~~~---g~d~~~~GNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~ 134 (252)
T cd00845 60 EANIELMNAL---GYDAVTIGNHEFDYG--LDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGL 134 (252)
T ss_pred cHHHHHHHhc---CCCEEeecccccccc--HHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEe
Confidence 1223333332 245577899998632 223333333333321 0 0 00112345567788765544 4
Q ss_pred cccccCC----------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEE
Q 008826 336 GAYISYD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 405 (552)
Q Consensus 336 dt~~~~~----------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdlvl 405 (552)
.+..... ......+.+++..+.. +.+...+|++.|.+.... ..+...+ .+||+||
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~~------------~~la~~~--~giDlvl 199 (252)
T cd00845 135 TTPDTPTYTPLGWIIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDDD------------EELAEEV--PGIDVIL 199 (252)
T ss_pred ccccceeecCCCcccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccch------------HHHHhcC--CCccEEE
Confidence 3321100 0012233343322222 245677999999775430 1121111 5899999
Q ss_pred EccccCceeeeeccccccCCCCcEEEEECCCC
Q 008826 406 NGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 406 sGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG 437 (552)
+||.|....... .-++++.+-+|.=|
T Consensus 200 ggH~H~~~~~~~------~~~~~~v~~~g~~~ 225 (252)
T cd00845 200 GGHTHHLLEEPE------VVNGTLIVQAGKYG 225 (252)
T ss_pred cCCcCcccCCCc------ccCCEEEEeCChhH
Confidence 999998654311 12356666555433
No 52
>PRK09453 phosphodiesterase; Provisional
Probab=98.71 E-value=6.8e-07 Score=85.08 Aligned_cols=75 Identities=20% Similarity=0.344 Sum_probs=46.2
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+|++++||+|..... .++++.+.+.++|.|+++||++.. |.. .+..+.|. .....+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~~----------~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GPR----------NPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------CcC----------CCCccccC--HHHHHHHHHhc
Confidence 589999999965322 334555556789999999999842 110 00111111 12233334332
Q ss_pred hhcCCeEEecCCchhc
Q 008826 278 VSKVPIMVVEGNHEIE 293 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~ 293 (552)
..+++.+.||||..
T Consensus 63 --~~~v~~V~GNhD~~ 76 (182)
T PRK09453 63 --ADKIIAVRGNCDSE 76 (182)
T ss_pred --CCceEEEccCCcch
Confidence 46899999999964
No 53
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.70 E-value=1.5e-07 Score=91.75 Aligned_cols=197 Identities=16% Similarity=0.191 Sum_probs=99.3
Q ss_pred EEEeCCCCCCCh---HHHHHHHHh----CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 202 AIVGDLGLTYNT---TCTINHMSS----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 202 avigD~~~~~~~---~~~l~~l~~----~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+++||+|.+... ......+.+ .++|.++++||++.. +. +... ... ......+...+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~--~~--~~~~----------~~~---~~~~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDL--WF--GDDE----------VVP---PAAHEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEE--Ee--cCCC----------CCC---hHHHHHHHHHH
Confidence 479999987543 222333332 489999999999942 21 1100 000 01111124455
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHH
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 354 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~ 354 (552)
+.+...++++.++||||.... ..+..+..... .......+.+++.+++++-... ++.....+.|+...
T Consensus 64 ~~~~~~~~v~~v~GNHD~~~~------~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~ 131 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFLLG------DFFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRL 131 (217)
T ss_pred HHHHCCCeEEEECCCchHHHH------hHHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHH
Confidence 555678999999999998522 11111111100 1111215677888888876542 23334445555544
Q ss_pred HhcccC------CCCCEEEEEcCCCccc------CCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc
Q 008826 355 LANVDR------SVTPWLVATWHPPWYS------SYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT 422 (552)
Q Consensus 355 L~~~~r------~~~~w~Iv~~H~P~y~------s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~ 422 (552)
+..... .-..|..-........ .............+.+..++.+++++++++||+|......
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~------ 205 (217)
T cd07398 132 GRNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHE------ 205 (217)
T ss_pred hCcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEE------
Confidence 322100 0000000000000000 0000011122345566777888999999999999775543
Q ss_pred cCCCCcEEEEECC
Q 008826 423 LDPCGPVHITIGD 435 (552)
Q Consensus 423 ~~~~G~vyiv~G~ 435 (552)
.++..|+++|+
T Consensus 206 --~~~~~~~n~G~ 216 (217)
T cd07398 206 --LDGKLYINLGD 216 (217)
T ss_pred --ECCEEEEECCC
Confidence 13678888886
No 54
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.70 E-value=9.1e-07 Score=94.12 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=31.0
Q ss_pred ceEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccc
Q 008826 198 PKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYA 237 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~ 237 (552)
.+||++++|+|++... .++++.+.+.++|+||++||+...
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 5899999999987421 234555557899999999999954
No 55
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.66 E-value=4.4e-07 Score=83.56 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECC
Q 008826 362 VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435 (552)
Q Consensus 362 ~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~ 435 (552)
...-+|||.|.|+++..... ..+.+++++++|+.++.||.|.-.|-.+-.. +-.|+.|+.+.+
T Consensus 157 ~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~~~~s---~v~Gi~y~Lvaa 219 (230)
T COG1768 157 GVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPNIGFS---NVRGIEYMLVAA 219 (230)
T ss_pred CcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCCCCcc---cccCceEEEEec
Confidence 34458999999998764321 2566788899999999999998776543221 224777765544
No 56
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.61 E-value=1.1e-06 Score=89.30 Aligned_cols=188 Identities=18% Similarity=0.150 Sum_probs=96.0
Q ss_pred eEEEEEeCCCCCCC-----------------hHHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 199 KRIAIVGDLGLTYN-----------------TTCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 199 ~rfavigD~~~~~~-----------------~~~~l~~l~~~~pDfvl~-~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
++|++.+|+|.... ....++++.+.+|+.+++ +||++...... .+....
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~-------~~~~~~------ 67 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLA-------DYYAKI------ 67 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHH-------HHhhhc------
Confidence 47889999986421 133566666677887776 99999532100 000000
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC-------C-CCCCCcceEEEEcC-eEE
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------E-SGSLSSFYYSFNAG-GIH 331 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~-~~~~~~~yYsf~~G-~v~ 331 (552)
+ ........+.|+.+ ... +.++||||+.. +...+....+...+|.- . .......|.-++.+ +++
T Consensus 68 ~--~~~~~~~~~~ln~~--g~d-~~~lGNHe~d~--g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~k 140 (277)
T cd07410 68 E--DGDPHPMIAAMNAL--GYD-AGTLGNHEFNY--GLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVK 140 (277)
T ss_pred c--cCCCChHHHHHHhc--CCC-EEeecccCccc--CHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCE
Confidence 0 00001233444444 333 66789999853 22334444444433311 0 01122456667888 866
Q ss_pred EEEecccccC---------------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHH
Q 008826 332 FIMLGAYISY---------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 396 (552)
Q Consensus 332 fI~Ldt~~~~---------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll 396 (552)
+-++.-.... ....+..++..++|++ .+...+|+++|........... ..+.....|.
T Consensus 141 VgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~----~~~~~~~~la 213 (277)
T cd07410 141 VGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESL----TGENAAYELA 213 (277)
T ss_pred EEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccccc----CCccHHHHHH
Confidence 5555421110 0112234444555544 3567899999988654321000 0111223344
Q ss_pred HH-cCCcEEEEccccCce
Q 008826 397 YS-YGVDIVFNGHVHAYE 413 (552)
Q Consensus 397 ~~-~~VdlvlsGH~H~ye 413 (552)
++ .+||++|+||.|...
T Consensus 214 ~~~~~vD~IlgGHsH~~~ 231 (277)
T cd07410 214 EEVPGIDAILTGHQHRRF 231 (277)
T ss_pred hcCCCCcEEEeCCCcccc
Confidence 44 489999999999754
No 57
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.58 E-value=9e-07 Score=89.04 Aligned_cols=194 Identities=15% Similarity=0.105 Sum_probs=102.8
Q ss_pred eEEEEEeCCCCCC-----------ChHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHH
Q 008826 199 KRIAIVGDLGLTY-----------NTTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 266 (552)
Q Consensus 199 ~rfavigD~~~~~-----------~~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~ 266 (552)
++|++++|+|.-. .....++++.+.+++ +++.+||++...... . + .+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~-------~-------------~-~~ 59 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS-------T-------------A-TK 59 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch-------h-------------h-cC
Confidence 4788888888211 123456666666788 999999998432100 0 0 00
Q ss_pred HHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC-------CC---CCCCcceEEEEcCeEEEEE--
Q 008826 267 WDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------ES---GSLSSFYYSFNAGGIHFIM-- 334 (552)
Q Consensus 267 wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~~---~~~~~~yYsf~~G~v~fI~-- 334 (552)
.....+.|+.+ .. -+.++||||+... ...+........+|.- .. -..-+.|.-++.+++++-+
T Consensus 60 g~~~~~~l~~l--~~-d~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG 134 (257)
T cd07406 60 GKQMVPVLNAL--GV-DLACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLG 134 (257)
T ss_pred CccHHHHHHhc--CC-cEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEE
Confidence 11233444443 22 3668999998532 2233333333322210 00 0112467788889866544
Q ss_pred ecccccC------C---CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH-cCCcEE
Q 008826 335 LGAYISY------D---KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIV 404 (552)
Q Consensus 335 Ldt~~~~------~---~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~Vdlv 404 (552)
+.+.... . .-..-.+.+++.+++..+.+...+|++.|.+... . . ++.++ .+||++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d----~---~la~~~~~iD~I 199 (257)
T cd07406 135 LVEEEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------D----K---RLAREVPEIDLI 199 (257)
T ss_pred EecccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----H---HHHHhCCCCceE
Confidence 4332110 0 0112233344444333334667899999987421 1 1 22333 389999
Q ss_pred EEccccCceeeeeccccccCCCCcEEEEECCCCCccc
Q 008826 405 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 441 (552)
Q Consensus 405 lsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~ 441 (552)
|+||.|..... ..++++.+-+|.-|...+
T Consensus 200 lgGH~H~~~~~--------~~~~t~vv~~g~~g~~vg 228 (257)
T cd07406 200 LGGHDHEYILV--------QVGGTPIVKSGSDFRTVY 228 (257)
T ss_pred EecccceeEee--------eECCEEEEeCCcCcceEE
Confidence 99999986622 124667777777776544
No 58
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.57 E-value=1.6e-07 Score=89.65 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=24.4
Q ss_pred EEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008826 367 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 416 (552)
Q Consensus 367 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~ 416 (552)
|++.|.|.+- ...+.+++++||||+|.-++..
T Consensus 129 ilL~H~P~~~------------------~~~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYK------------------IFLEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEccccee------------------ccccCCCCEEEeCccCCCeEEE
Confidence 8888999764 1224589999999999877653
No 59
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.46 E-value=8.9e-07 Score=94.48 Aligned_cols=75 Identities=23% Similarity=0.355 Sum_probs=52.3
Q ss_pred eEEEEEeCCCCCC---C-----------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 199 KRIAIVGDLGLTY---N-----------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 199 ~rfavigD~~~~~---~-----------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
+||++++|+|++. + ....++.+.+.++||||++||+.+.+. |..
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~------------------Ps~---- 58 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNN------------------PSP---- 58 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCC------------------CCH----
Confidence 5899999999982 1 123556666789999999999995421 111
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEecCCchhccc
Q 008826 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQ 295 (552)
Q Consensus 265 ~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~ 295 (552)
..-..+.+.++.+. .++|++++.||||....
T Consensus 59 ~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 59 RALKLFLEALRRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCCchhc
Confidence 11234555666663 68999999999998643
No 60
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.42 E-value=4.2e-06 Score=84.54 Aligned_cols=177 Identities=16% Similarity=0.176 Sum_probs=89.3
Q ss_pred HHHHHHHhC-CCCEE-EEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchh
Q 008826 215 CTINHMSSN-EPDLV-LLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEI 292 (552)
Q Consensus 215 ~~l~~l~~~-~pDfv-l~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~ 292 (552)
..++++.+. ++|.+ +.+||+....... ...+.....+.|+. +++.++.||||+
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~~---------------------~~~~g~~~~~~l~~----~g~da~~GNHef 94 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGEA---------------------LYTRGQAMVDALNA----LGVDAMVGHWEF 94 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChHH---------------------hhcCChhHHHHHHh----hCCeEEeccccc
Confidence 345666666 89977 5799999532100 00011122333333 555555599998
Q ss_pred cccccCcchHHhhhhcCCCCCCC-------C-CCCcceEEEEcCeEE--EEEecccccCC----------CcHHHHHHHH
Q 008826 293 EAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAGGIH--FIMLGAYISYD----------KSGHQYKWLE 352 (552)
Q Consensus 293 ~~~~~~~~f~~y~~~f~~P~~~~-------~-~~~~~yYsf~~G~v~--fI~Ldt~~~~~----------~~~~Q~~WL~ 352 (552)
... ...+....+.+.+|.-.. + ..-..|.-++.++++ ||.+.+..... ......+.++
T Consensus 95 d~g--~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T cd07411 95 TYG--PERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQ 172 (264)
T ss_pred ccC--HHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHH
Confidence 632 233444444444432100 0 011235667888755 45554321000 0122344455
Q ss_pred HHHhccc-CCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH-cCCcEEEEccccCceeeeeccccccCCCCcEE
Q 008826 353 KDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (552)
Q Consensus 353 ~~L~~~~-r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vy 430 (552)
+.+++.. ..+...+|++.|.+.... . .+.++ .+||++|+||.|..... |. ..-++++.
T Consensus 173 ~~~~~~~~~~~~D~iI~l~H~g~~~~------------~---~la~~~~~iDlilgGH~H~~~~~-~~----~~~~~t~v 232 (264)
T cd07411 173 EVVVKLRREEGVDVVVLLSHNGLPVD------------V---ELAERVPGIDVILSGHTHERTPK-PI----IAGGGTLV 232 (264)
T ss_pred HHHHHHHHhCCCCEEEEEecCCchhh------------H---HHHhcCCCCcEEEeCcccccccC-cc----cccCCEEE
Confidence 4433321 245678999999875311 1 12223 47999999999964322 11 01246666
Q ss_pred EEECCCCC
Q 008826 431 ITIGDGGN 438 (552)
Q Consensus 431 iv~G~gG~ 438 (552)
+-+|.-|.
T Consensus 233 ~~~g~~~~ 240 (264)
T cd07411 233 VEAGSHGK 240 (264)
T ss_pred EEcCcccc
Confidence 66666555
No 61
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.37 E-value=4.9e-06 Score=83.69 Aligned_cols=182 Identities=20% Similarity=0.209 Sum_probs=91.2
Q ss_pred eEEEEEeCCCCCCC--------h---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHH
Q 008826 199 KRIAIVGDLGLTYN--------T---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 267 (552)
Q Consensus 199 ~rfavigD~~~~~~--------~---~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~w 267 (552)
++|++++|+|.... . ...++++.+..+++++.+||++..... .+ ....
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~--------------------~~~g 59 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SD--------------------LDKG 59 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hh--------------------hcCC
Confidence 47999999996421 1 234455544457899999999843110 00 0011
Q ss_pred HHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC-------CC-CCcceEEEEcC-eEE--EEEec
Q 008826 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------GS-LSSFYYSFNAG-GIH--FIMLG 336 (552)
Q Consensus 268 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-------~~-~~~~yYsf~~G-~v~--fI~Ld 336 (552)
....+.|+.+ ..-+ .++||||+.. +...+..+.+...+|.-.. +. .-..|.-++.+ +++ ||.+-
T Consensus 60 ~~~~~~ln~~--g~d~-~~~GNHefd~--G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~ 134 (257)
T cd07408 60 ETIIKIMNAV--GYDA-VTPGNHEFDY--GLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLT 134 (257)
T ss_pred cHHHHHHHhc--CCcE-EccccccccC--CHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeec
Confidence 1223444433 3444 5679999853 2334444444444443100 10 11235556777 655 45544
Q ss_pred ccc-cC--C-C------cHHHHHHHHHH-HhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEE
Q 008826 337 AYI-SY--D-K------SGHQYKWLEKD-LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 405 (552)
Q Consensus 337 t~~-~~--~-~------~~~Q~~WL~~~-L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdlvl 405 (552)
+.. .. . . -..-.+-+++. .....+.+...+|++.|........ .+. ...+.. .-.+||++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~-~~~-----~~~la~--~~~giDvIi 206 (257)
T cd07408 135 TPETATKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS-PWT-----STELAA--NVTGIDLII 206 (257)
T ss_pred CcCcccccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC-Ccc-----HHHHHH--hCCCceEEE
Confidence 321 00 0 0 00112223333 2222224567899999988654321 111 112222 124899999
Q ss_pred EccccCcee
Q 008826 406 NGHVHAYER 414 (552)
Q Consensus 406 sGH~H~yeR 414 (552)
.||.|....
T Consensus 207 gGH~H~~~~ 215 (257)
T cd07408 207 DGHSHTTIE 215 (257)
T ss_pred eCCCccccc
Confidence 999997654
No 62
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.32 E-value=1.4e-05 Score=80.32 Aligned_cols=188 Identities=17% Similarity=0.194 Sum_probs=99.6
Q ss_pred EEEEeCCCCCCChHHHH---HHHHh---CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 201 IAIVGDLGLTYNTTCTI---NHMSS---NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 201 favigD~~~~~~~~~~l---~~l~~---~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
|+|.||.|... ..+. +.+.+ .++|++|++||+.-. + +....++- .....| ..+..|.+.+
T Consensus 1 i~v~Gd~HG~~--~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~--~--~~~d~~~~-------~~p~k~-~~~~~f~~~~ 66 (262)
T cd00844 1 IAVEGCCHGEL--DKIYETLEKIEKKEGTKVDLLICCGDFQAV--R--NEADLKCM-------AVPPKY-RKMGDFYKYY 66 (262)
T ss_pred CEEEecCCccH--HHHHHHHHHHHHhcCCCCcEEEEcCCCCCc--C--Ccchhhhh-------ccchhh-hhhhhHHHHh
Confidence 58999999853 3333 33332 469999999999621 1 11111000 011222 2344455555
Q ss_pred HHh-hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcce-----EEEEcCeEEEEEecccc---cCC---
Q 008826 275 QNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFY-----YSFNAGGIHFIMLGAYI---SYD--- 342 (552)
Q Consensus 275 ~~l-~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~y-----Ysf~~G~v~fI~Ldt~~---~~~--- 342 (552)
+.. ...+|+++|.||||-.. .+.+ ++..+ ....+.+ ..++++|++|..|.... ++.
T Consensus 67 ~g~~~~p~~t~fi~GNHE~~~--------~l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~ 134 (262)
T cd00844 67 SGEKKAPILTIFIGGNHEASN--------YLWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGH 134 (262)
T ss_pred cCCccCCeeEEEECCCCCCHH--------HHHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEeccccccccccccc
Confidence 443 35678899999999531 1111 11110 0012233 23567899999997632 111
Q ss_pred -----CcHHHHHHHH-------HHHhcccCCCCCEEEEEcCCCcccCCCCCCch------------h---HHHHHHHHHH
Q 008826 343 -----KSGHQYKWLE-------KDLANVDRSVTPWLVATWHPPWYSSYSSHYRE------------A---ECMRVEMEAL 395 (552)
Q Consensus 343 -----~~~~Q~~WL~-------~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~------------~---~~~r~~l~~l 395 (552)
....++..+. +.|.... .+--|+++|.|+.......... . ..-...+..|
T Consensus 135 ~~~~~~t~~~~rs~y~~r~~~~~kl~~~~---~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~l 211 (262)
T cd00844 135 FERPPYSEDTKRSAYHVRNIEVFKLKQLK---QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEEL 211 (262)
T ss_pred ccCCCCCHHHHHHhhhhhHHHHHHHHhcC---CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHH
Confidence 1223333211 1122221 1225888999987653211100 0 0112467789
Q ss_pred HHHcCCcEEEEccccC-ceeeee
Q 008826 396 LYSYGVDIVFNGHVHA-YERSNR 417 (552)
Q Consensus 396 l~~~~VdlvlsGH~H~-yeR~~p 417 (552)
+++.+....|+||.|. |++..|
T Consensus 212 l~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 212 LKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred HHHhCCCEEEEecCCcccceecC
Confidence 9999999999999997 676644
No 63
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.30 E-value=1.3e-05 Score=81.95 Aligned_cols=84 Identities=14% Similarity=0.102 Sum_probs=45.6
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH--cCCcEEEEccccCceeeeeccccccCCC
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS--YGVDIVFNGHVHAYERSNRVFNYTLDPC 426 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~--~~VdlvlsGH~H~yeR~~pv~n~~~~~~ 426 (552)
+-+++.+++.+..+...+|++.|........... .+........++.+ .+||++|.||.|..... +. ..-+
T Consensus 178 e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~~ 250 (288)
T cd07412 178 EAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAGN 250 (288)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCcC
Confidence 3444444444334567799999987653221100 00011122334444 37999999999976532 10 0125
Q ss_pred CcEEEEECCCCCc
Q 008826 427 GPVHITIGDGGNL 439 (552)
Q Consensus 427 G~vyiv~G~gG~~ 439 (552)
+++.+..|.-|..
T Consensus 251 ~~~v~q~g~~g~~ 263 (288)
T cd07412 251 PRLVTQAGSYGKA 263 (288)
T ss_pred CEEEEecChhhce
Confidence 6777777776664
No 64
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.29 E-value=2.8e-05 Score=77.85 Aligned_cols=191 Identities=15% Similarity=0.228 Sum_probs=101.4
Q ss_pred EEEEEeCCCCCCCh---HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 200 RIAIVGDLGLTYNT---TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 200 rfavigD~~~~~~~---~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
||+++||.=..... ...+.++. +.++||++..||.+-. |... . ....+.|.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~g------g~gl------------~-------~~~~~~L~ 55 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAG------GKGI------------T-------PKIAKELL 55 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccC------CCCC------------C-------HHHHHHHH
Confidence 58899998554332 23445554 3579999999999832 2110 0 12233343
Q ss_pred HhhhcCCeEEecCCchhcccccCcchHHhhhhcC---CCCCC-CCCCCcceEEEEcCeEEEEEecc--cccCCCcHHHHH
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA---FPSEE-SGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYK 349 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~---~P~~~-~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~ 349 (552)
.+ .+-++ +.|||++... ....+.+... .|.+- .......|.-++.+++++-+++- .........-++
T Consensus 56 ~~--G~D~i-TlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~ 128 (255)
T cd07382 56 SA--GVDVI-TMGNHTWDKK----EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFR 128 (255)
T ss_pred hc--CCCEE-EecccccCcc----hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHH
Confidence 33 44444 4599998643 2333333221 11111 11123457778888876655543 211111112233
Q ss_pred HHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcE
Q 008826 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPV 429 (552)
Q Consensus 350 WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~v 429 (552)
-+++.+++.+. +...+||.+|.-.. .+ +.++.. ...-+||+++.||+|..-- +.++-|+|+.
T Consensus 129 ~~~~~v~~lk~-~~D~IIV~~H~g~t-------sE----k~ala~-~ldg~VdvIvGtHTHv~t~-----d~~il~~gTa 190 (255)
T cd07382 129 AADELLEELKE-EADIIFVDFHAEAT-------SE----KIALGW-YLDGRVSAVVGTHTHVQTA-----DERILPGGTA 190 (255)
T ss_pred HHHHHHHHHhc-CCCEEEEEECCCCC-------HH----HHHHHH-hCCCCceEEEeCCCCccCC-----ccEEeeCCeE
Confidence 45555555543 56789999996321 11 122322 1133599999999996422 1222367998
Q ss_pred EEEE-CCCCCcc
Q 008826 430 HITI-GDGGNLE 440 (552)
Q Consensus 430 yiv~-G~gG~~~ 440 (552)
|++. |.-|...
T Consensus 191 ~itd~Gm~G~~~ 202 (255)
T cd07382 191 YITDVGMTGPYD 202 (255)
T ss_pred EEecCccccCCC
Confidence 8873 6666643
No 65
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.27 E-value=3.7e-06 Score=81.72 Aligned_cols=190 Identities=16% Similarity=0.241 Sum_probs=98.0
Q ss_pred EEeCCCCCCChHH---H-HHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 203 IVGDLGLTYNTTC---T-INHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 203 vigD~~~~~~~~~---~-l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+|||+|++..... . ++-|... +.|.+.++||++. .|. |.. .+.+.-++..+.+..
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~--g~~---------------~~~~~~~~V~~~l~~ 62 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWI--GDD---------------EPPQLHRQVAQKLLR 62 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhh--cCC---------------cccHHHHHHHHHHHH
Confidence 6899999844322 2 2333333 4599999999993 332 221 011222333444444
Q ss_pred h-hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHH
Q 008826 277 L-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDL 355 (552)
Q Consensus 277 l-~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L 355 (552)
+ ...+|++.++||||+... ..+...+..- ...+.+--+++-|-+++++-.- .+.....++.|+....
T Consensus 63 ~a~~G~~v~~i~GN~Dfll~------~~f~~~~g~~-----~l~~~~~~~~l~g~~~Ll~HGD-~f~t~~~~y~~~r~~~ 130 (237)
T COG2908 63 LARKGTRVYYIHGNHDFLLG------KRFAQEAGGM-----TLLPDPIVLDLYGKRILLAHGD-TFCTDDRAYQWFRYKV 130 (237)
T ss_pred HHhcCCeEEEecCchHHHHH------HHHHhhcCce-----EEcCcceeeeecCcEEEEEeCC-cccchHHHHHHHHHHc
Confidence 4 356999999999997421 2222222100 0112233344444455555331 1223345555555443
Q ss_pred hcccCCCCCEE-EEEcCCCcc----------c-C--CCCCCch----hHHHHHHHHHHHHHcCCcEEEEccccCceeeee
Q 008826 356 ANVDRSVTPWL-VATWHPPWY----------S-S--YSSHYRE----AECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 417 (552)
Q Consensus 356 ~~~~r~~~~w~-Iv~~H~P~y----------~-s--~~~~~~~----~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~p 417 (552)
.. +|. .++.+.|.. + + ....-+. .+.+.+...+.+++++||.+++||+|.-+..
T Consensus 131 ~~------~~~~~lflnl~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~-- 202 (237)
T COG2908 131 HW------AWLQLLFLNLPLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIH-- 202 (237)
T ss_pred cc------HHHHHHHHHhHHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhc--
Confidence 22 111 122222221 0 1 0000000 1223456678889999999999999975443
Q ss_pred ccccccCCCCcEEEEECCCC
Q 008826 418 VFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 418 v~n~~~~~~G~vyiv~G~gG 437 (552)
+-.+..||+.|+..
T Consensus 203 ------~i~~~~yi~lGdW~ 216 (237)
T COG2908 203 ------NIPGITYINLGDWV 216 (237)
T ss_pred ------cCCCceEEecCcch
Confidence 23469999999987
No 66
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.27 E-value=5.5e-05 Score=76.05 Aligned_cols=194 Identities=16% Similarity=0.178 Sum_probs=103.9
Q ss_pred eEEEEEeCCCCCCCh---HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 199 ~rfavigD~~~~~~~---~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+||+++||.=..... ...+.++.+ .++||++..||++-. |... . ....+.|
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~g------G~Gi----------------~---~~~~~~L 55 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTH------GKGL----------------T---LKIYEFL 55 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCC------CCCC----------------C---HHHHHHH
Confidence 589999998643211 234455553 578999999999832 2110 0 1122233
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHh---hhhcCCCCCCCCCCCcceEEEEcCeEEEEEecc--cccCCC--cHHH
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAY---SSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGA--YISYDK--SGHQ 347 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y---~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~--~~~Q 347 (552)
.. ..+-++.+ |||++............ .....+|.. ..+..|..++.++.++-+++- ...... ...-
T Consensus 56 ~~--~GvDviT~-GNH~~Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~P 129 (266)
T TIGR00282 56 KQ--SGVNYITM-GNHTWFQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNP 129 (266)
T ss_pred Hh--cCCCEEEc-cchhccCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCH
Confidence 32 35666665 99999633100001111 111122321 223346667888766655542 211111 1112
Q ss_pred HHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCC
Q 008826 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (552)
Q Consensus 348 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G 427 (552)
++-+++.+++.+. +++.+||.+|.-.. .. +.....+.+.+|++|+.-|+|..---. .+-|+|
T Consensus 130 f~~~d~~i~~lk~-~~d~IIVd~Haeat-----------sE-K~a~~~~ldg~vsaVvGtHtHV~TaD~-----~il~~g 191 (266)
T TIGR00282 130 FKVLKELINMLKK-DCDLIFVDFHAETT-----------SE-KNAFGMAFDGYVTAVVGTHTHVPTADL-----RILPKG 191 (266)
T ss_pred HHHHHHHHHhhhc-CCCEEEEEeCCCCH-----------HH-HHHHHHHhCCCccEEEeCCCCCCCCcc-----eeCCCC
Confidence 2334444444432 46789999995321 11 334556667799999999999532211 123689
Q ss_pred cEEEE-ECCCCCccc
Q 008826 428 PVHIT-IGDGGNLEK 441 (552)
Q Consensus 428 ~vyiv-~G~gG~~~~ 441 (552)
+-||+ +|.-|...+
T Consensus 192 tayitD~Gm~G~~~s 206 (266)
T TIGR00282 192 TAYITDVGMTGPFGS 206 (266)
T ss_pred CEEEecCCcccCccc
Confidence 99998 477776543
No 67
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=98.26 E-value=6.4e-05 Score=76.58 Aligned_cols=203 Identities=16% Similarity=0.211 Sum_probs=103.7
Q ss_pred ceEEEEEeCCCCCCC--------------hHHHHHHHH----hCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 198 PKRIAIVGDLGLTYN--------------TTCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 198 ~~rfavigD~~~~~~--------------~~~~l~~l~----~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
.++|++.+|+|.... ..+.++++. +.+++ +++.+||.+....+
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~------------------ 66 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL------------------ 66 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec------------------
Confidence 689999999996421 122334333 23555 67789999953211
Q ss_pred cccccHHHHHHHHHHHHHhhhcCCe-EEecCCchhccccc-CcchHHhhhhcCCCCC--------CCCC---CCcceEEE
Q 008826 259 IHETYQPRWDYWGRFMQNLVSKVPI-MVVEGNHEIEAQAG-NQTFVAYSSRFAFPSE--------ESGS---LSSFYYSF 325 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~~~iP~-~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~--------~~~~---~~~~yYsf 325 (552)
...+..++....++|+.+ ++ ..++||||+..... -..+..+.....+|-- +.+. ....|.-+
T Consensus 67 -~~~~~~~g~~~~~~mN~m----gyDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~ 141 (282)
T cd07407 67 -SDASPPPGSYSNPIFRMM----PYDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKF 141 (282)
T ss_pred -eeeecCCChHHHHHHHhc----CCcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEE
Confidence 111111223344555544 33 57899999953211 1112223232223310 0001 12336666
Q ss_pred EcC-eEEE--EEeccccc-------CCC--cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHH
Q 008826 326 NAG-GIHF--IMLGAYIS-------YDK--SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEME 393 (552)
Q Consensus 326 ~~G-~v~f--I~Ldt~~~-------~~~--~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~ 393 (552)
+.+ ++++ |.+-+... +.. ...+.+|+.+.|++ .+...+|++.|....... + ..+...
T Consensus 142 ~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~ 210 (282)
T cd07407 142 TTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHD 210 (282)
T ss_pred EcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHH
Confidence 776 7664 44433211 011 12233488877874 346679999998764321 1 111112
Q ss_pred HHHHHc-CCc-EEEEccccCceeeeeccccccCCCCcEEEEECCCCCccc
Q 008826 394 ALLYSY-GVD-IVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 441 (552)
Q Consensus 394 ~ll~~~-~Vd-lvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~ 441 (552)
.+.++. ++| ++|.||+|..... ++ .+|+..+-.|.-|...+
T Consensus 211 ~la~~~~~id~~Ii~GHsH~~~~~-~~------~~~~~ivq~G~~g~~lg 253 (282)
T cd07407 211 AIRKIFPDTPIQFLGGHSHVRDFT-QY------DSSSTGLESGRYLETVG 253 (282)
T ss_pred HHHHhCCCCCEEEEeCCcccccce-ec------cCcEEEEeccchhhceE
Confidence 233334 577 7999999975332 11 24677677777776544
No 68
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.16 E-value=3.1e-05 Score=72.90 Aligned_cols=38 Identities=18% Similarity=0.236 Sum_probs=29.3
Q ss_pred eEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCccc
Q 008826 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 199 ~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
++|+++||+|.... .....+.....++|+|||+||.+.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~ 40 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTS 40 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCC
Confidence 68999999998753 233444445679999999999994
No 69
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.15 E-value=2e-05 Score=86.70 Aligned_cols=202 Identities=17% Similarity=0.203 Sum_probs=102.8
Q ss_pred CceEEEEEeCCCCCCCh------HHHHHHHH---------hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccc
Q 008826 197 YPKRIAIVGDLGLTYNT------TCTINHMS---------SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 261 (552)
Q Consensus 197 ~~~rfavigD~~~~~~~------~~~l~~l~---------~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e 261 (552)
.+.+++++||+|.+... ...++.+. +.+++.++++||++...+.. .+... +.....
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~-p~~~~--------~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIY-PGQEE--------ELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCC-ccchh--------hccchh
Confidence 36899999999987531 22344455 45799999999999531100 00000 000001
Q ss_pred ccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccC--cchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccc
Q 008826 262 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI 339 (552)
Q Consensus 262 ~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~ 339 (552)
.+ .+.+.+.++++.+...+|+++++||||....... .....+...+... ......+ -+.+++++.++++.-...
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~--~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEH--NVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcC--CeEEecC-CeEEEECCEEEEEECCCC
Confidence 11 2234566677777788999999999997532111 1112222222111 0011122 235778888887775421
Q ss_pred -----cCC---CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccC
Q 008826 340 -----SYD---KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 340 -----~~~---~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+- ....-.+.|++.|+.-. -+| ..-.+.|.+.... .+ +.-+.-.|++++||.|.
T Consensus 389 idDl~~~i~~~s~~~p~~~m~~~l~~rH--laP--t~p~~~~~~p~~~-D~------------lvi~~~Pdv~~~GH~H~ 451 (504)
T PRK04036 389 IDDVISLIPGASYEKPGKAMEELLKRRH--LAP--IYGGRTPIAPEKE-DY------------LVIDEVPDIFHTGHVHI 451 (504)
T ss_pred HHHHHhhcccccccCHHHHHHHHHHhcc--cCC--CCCCCEEeCcCCC-CC------------EEEecCCCEEEeCCCCc
Confidence 110 11223455666665411 010 0001122232111 10 11112359999999998
Q ss_pred ceeeeeccccccCCCCcEEEEECCC
Q 008826 412 YERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 412 yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
+.... -.|+.+|..|+-
T Consensus 452 ~~~~~--------~~g~~~IN~gsf 468 (504)
T PRK04036 452 NGYGK--------YRGVLLINSGTW 468 (504)
T ss_pred cceEE--------ECCEEEEECCcc
Confidence 76542 247888877764
No 70
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.14 E-value=2.9e-05 Score=79.16 Aligned_cols=174 Identities=18% Similarity=0.239 Sum_probs=91.6
Q ss_pred eEEEEEeCCCCCC-------------------C---hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCC
Q 008826 199 KRIAIVGDLGLTY-------------------N---TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFS 255 (552)
Q Consensus 199 ~rfavigD~~~~~-------------------~---~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~ 255 (552)
++|++.+|+|... . ....++++.+..++ +++.+||++......
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~-------------- 66 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWY-------------- 66 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchh--------------
Confidence 4688888888531 1 12345666556677 566699998532110
Q ss_pred CCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC-----C------CCCcceEE
Q 008826 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-----G------SLSSFYYS 324 (552)
Q Consensus 256 ~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-----~------~~~~~yYs 324 (552)
.. .+.....+.|+.+ ... +.++||||+... ...+..+.+...+|.-.. . ..-..|.-
T Consensus 67 -----~~--~~g~~~~~~ln~~--g~D-~~~lGNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i 134 (281)
T cd07409 67 -----TL--YKGNADAEFMNLL--GYD-AMTLGNHEFDDG--VEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTI 134 (281)
T ss_pred -----hh--cCChHHHHHHHhc--CCC-EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEE
Confidence 00 0112233444443 344 456799999632 233444444443332110 0 11234666
Q ss_pred EEcCeEEE--EEeccccc-C--C-----CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHH
Q 008826 325 FNAGGIHF--IMLGAYIS-Y--D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 394 (552)
Q Consensus 325 f~~G~v~f--I~Ldt~~~-~--~-----~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ 394 (552)
++.+++++ |.+-+... . . .-.+..+.+++.+++.+..+...+|++.|..... . . .
T Consensus 135 ~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~--------d----~---~ 199 (281)
T cd07409 135 LTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV--------D----K---E 199 (281)
T ss_pred EEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh--------H----H---H
Confidence 78888665 44433210 0 0 0123345566666665444577799999976321 0 1 2
Q ss_pred HHHH-cCCcEEEEccccCce
Q 008826 395 LLYS-YGVDIVFNGHVHAYE 413 (552)
Q Consensus 395 ll~~-~~VdlvlsGH~H~ye 413 (552)
+.++ .+||+++.||.|...
T Consensus 200 la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 200 IARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHcCCCCcEEEeCCcCccc
Confidence 2233 489999999999753
No 71
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.13 E-value=7.3e-05 Score=90.37 Aligned_cols=184 Identities=18% Similarity=0.206 Sum_probs=95.5
Q ss_pred CceEEEEEeCCCCCCC-h---HHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHH
Q 008826 197 YPKRIAIVGDLGLTYN-T---TCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-~---~~~l~~l~~~~pDfvl~-~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~ 271 (552)
..++|++++|+|.... . ...++++.+.+|+.+++ +||++..... ... .+.....
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-------------------~~~--~~g~~~~ 717 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-------------------SNL--LKGLPVL 717 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-------------------hhh--cCChHHH
Confidence 4699999999996532 2 34566666678887766 9999843210 000 0112233
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcC------------CCC---C----CCCC---CCcceEEEEcCe
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA------------FPS---E----ESGS---LSSFYYSFNAGG 329 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~------------~P~---~----~~~~---~~~~yYsf~~G~ 329 (552)
+.|+.+ -.-+.++||||+... ...+..+..... +|- | ..+. ....|.-++.++
T Consensus 718 ~~ln~l---g~d~~~~GNHEfd~g--~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G 792 (1163)
T PRK09419 718 KMMKEM---GYDASTFGNHEFDWG--PDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG 792 (1163)
T ss_pred HHHhCc---CCCEEEecccccccC--hHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC
Confidence 444433 223569999998632 222222222211 111 0 0011 123466678888
Q ss_pred EEE--EEecccc-cC-C--------CcHHHHHHHHHHHhccc-CCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHH
Q 008826 330 IHF--IMLGAYI-SY-D--------KSGHQYKWLEKDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 396 (552)
Q Consensus 330 v~f--I~Ldt~~-~~-~--------~~~~Q~~WL~~~L~~~~-r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll 396 (552)
+++ |.+-+.. .. . .-....+.+++..++.+ ..+...+|++.|.......... + ....+|.
T Consensus 793 ~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~~--~-----~~~~~lA 865 (1163)
T PRK09419 793 KKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTTG--E-----ITGLELA 865 (1163)
T ss_pred EEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccccc--c-----cHHHHHH
Confidence 654 4443321 00 0 01122333444444433 2456789999998865321111 1 1223444
Q ss_pred HHc-CCcEEEEccccCce
Q 008826 397 YSY-GVDIVFNGHVHAYE 413 (552)
Q Consensus 397 ~~~-~VdlvlsGH~H~ye 413 (552)
++. +||++|.||+|..-
T Consensus 866 ~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 866 KKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred HhCCCCCEEEeCCCCccc
Confidence 444 79999999999753
No 72
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=98.08 E-value=7.5e-05 Score=74.42 Aligned_cols=197 Identities=16% Similarity=0.196 Sum_probs=97.2
Q ss_pred EEEeCCCCCCCh--H----HHHHHHHhC-----CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHH
Q 008826 202 AIVGDLGLTYNT--T----CTINHMSSN-----EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270 (552)
Q Consensus 202 avigD~~~~~~~--~----~~l~~l~~~-----~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~ 270 (552)
+++||+|++... . ..++.+... ++|.|+++||++...... .+... .+ ..+.....+..+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~~~-~~--------~~~~~~~~~~~~ 71 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQEE-EL--------EILDIYEQYEEA 71 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccchh-hh--------hhhhHHHHHHHH
Confidence 689999976432 1 223333333 569999999999531000 00000 00 000112235566
Q ss_pred HHHHHHhhhcCCeEEecCCchhccccc--CcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccc--cc---C--
Q 008826 271 GRFMQNLVSKVPIMVVEGNHEIEAQAG--NQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY--IS---Y-- 341 (552)
Q Consensus 271 ~~~l~~l~~~iP~~~v~GNHD~~~~~~--~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~--~~---~-- 341 (552)
.++++.+...+|+++++||||...... ......+...+. +.+ -....+.+ .+.+++.+|++.... .+ +
T Consensus 72 ~~~l~~L~~~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~-~~~-v~~l~Np~-~~~~~g~~i~~~~G~~~~d~~~~~~ 148 (243)
T cd07386 72 AEYLSDVPSHIKIIIIPGNHDAVRQAEPQPALPEEIRKLFL-PGN-VEFVSNPA-LVKIHGVDVLIYHGRSIDDVVKLIP 148 (243)
T ss_pred HHHHHhcccCCeEEEeCCCCCcccccCCCCCccHHHHhhcC-CCc-eEEeCCCC-EEEECCEEEEEECCCCHHHHHHhCC
Confidence 777888877899999999999853211 111223332221 100 00112222 577888888765321 00 1
Q ss_pred -CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccc
Q 008826 342 -DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN 420 (552)
Q Consensus 342 -~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n 420 (552)
.....-.++++..|.+.. -.|. .-.-.|.+... .++ +..+...+++|+||.|.+....
T Consensus 149 ~~~~~~~~~~~~~~l~~~h--l~P~--~~~~~~~~~~~-~~~------------~~~~~~p~vii~Gh~h~~~~~~---- 207 (243)
T cd07386 149 GLSYDKPGKAMEELLKRRH--LAPI--YGGRTPIAPEP-EDY------------LVIDEVPDILHTGHVHVYGVGV---- 207 (243)
T ss_pred CCCcccHHHHHHHHHhhcc--cCCC--CCCCEeeCCCC-CCC------------EEecCCCCEEEECCCCchHhEE----
Confidence 112233566666665521 1110 00001111110 000 1112367899999999876653
Q ss_pred cccCCCCcEEEEECCC
Q 008826 421 YTLDPCGPVHITIGDG 436 (552)
Q Consensus 421 ~~~~~~G~vyiv~G~g 436 (552)
-+|..+|..|+-
T Consensus 208 ----~~~~~~vn~Gsf 219 (243)
T cd07386 208 ----YRGVLLVNSGTW 219 (243)
T ss_pred ----ECCEEEEECCCC
Confidence 247888877763
No 73
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.08 E-value=1e-05 Score=81.14 Aligned_cols=73 Identities=26% Similarity=0.439 Sum_probs=49.1
Q ss_pred eEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 199 ~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
+||++++|+|++... ...++.+.+.++|+|+++||++... . + . ..
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~------~------------p--~--~~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTA------N------------P--P--AE 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCC------C------------C--C--HH
Confidence 589999999987421 1234445567899999999999531 1 0 0 11
Q ss_pred HHHHHHHHHHHhhh-c-CCeEEecCCchhc
Q 008826 266 RWDYWGRFMQNLVS-K-VPIMVVEGNHEIE 293 (552)
Q Consensus 266 ~wd~~~~~l~~l~~-~-iP~~~v~GNHD~~ 293 (552)
....+.++++.+.. . +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 22334556666642 3 8999999999985
No 74
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=98.04 E-value=9.6e-06 Score=78.84 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=25.2
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~-~~pDfvl~~GDl~Y 236 (552)
||+++||+|..... .++++.+.. .++|.++++||+++
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 68999999965321 223333322 36899999999995
No 75
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.01 E-value=4.8e-05 Score=79.81 Aligned_cols=111 Identities=18% Similarity=0.328 Sum_probs=71.0
Q ss_pred ceEEEEEeCCCCCCCh------------------HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 198 PKRIAIVGDLGLTYNT------------------TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 198 ~~rfavigD~~~~~~~------------------~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
++|++.++|.|.-.+. ...+..+. ..+||.++++||+.+. |...+
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDe------G~~~~---------- 111 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDE------GQWAG---------- 111 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEecccccc------CccCC----------
Confidence 7999999999976421 11222222 3599999999999953 33211
Q ss_pred cccccHHHHHHHHHHHHHhh---hcCCeEEecCCchhcccccC--cchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEE
Q 008826 259 IHETYQPRWDYWGRFMQNLV---SKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFI 333 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~---~~iP~~~v~GNHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI 333 (552)
.++|....+.++.+. ..+|++.++||||++..... ..-..|.+.| ++...+|+.|+..|+
T Consensus 112 -----~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~f----------g~~~r~f~v~~~tf~ 176 (410)
T KOG3662|consen 112 -----DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVF----------GPTERRFDVGNLTFV 176 (410)
T ss_pred -----hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccccccccchhHHHHHHHhh----------cchhhhhccCCceeE
Confidence 245655444455542 47999999999999743211 1113333333 235667999999999
Q ss_pred Eecccc
Q 008826 334 MLGAYI 339 (552)
Q Consensus 334 ~Ldt~~ 339 (552)
++|++.
T Consensus 177 ~~d~~~ 182 (410)
T KOG3662|consen 177 MFDSNA 182 (410)
T ss_pred Eeeehh
Confidence 999864
No 76
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.95 E-value=2.3e-05 Score=76.27 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=20.2
Q ss_pred HHHHHHHHcCCcEEEEccccCcee
Q 008826 391 EMEALLYSYGVDIVFNGHVHAYER 414 (552)
Q Consensus 391 ~l~~ll~~~~VdlvlsGH~H~yeR 414 (552)
.+..+|+.++.++++.||+|.-..
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~~ 181 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEGG 181 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeecC
Confidence 577888999999999999997543
No 77
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.93 E-value=0.00021 Score=73.07 Aligned_cols=187 Identities=18% Similarity=0.152 Sum_probs=88.7
Q ss_pred eEEEEEeCCCCCCC-----------hHHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCCCCcCCCCCCccccc
Q 008826 199 KRIAIVGDLGLTYN-----------TTCTINHMSSN----EP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 262 (552)
Q Consensus 199 ~rfavigD~~~~~~-----------~~~~l~~l~~~----~p-Dfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~ 262 (552)
++|++.+|+|.... ....++++.+. ++ -+++.+||+... +. ....
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~G-------s~------------~~~~ 61 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTG-------VP------------ESDL 61 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCC-------ch------------hHHh
Confidence 47899999997521 12345555432 33 488999999842 21 0000
Q ss_pred cHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC------CCC-CCCcceEEEEcCeEEEEE-
Q 008826 263 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE------ESG-SLSSFYYSFNAGGIHFIM- 334 (552)
Q Consensus 263 y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~------~~~-~~~~~yYsf~~G~v~fI~- 334 (552)
+ +.....+.|+.+ ..-. .++||||+... ...+........+|.- ..+ .....|.-++.+++++-+
T Consensus 62 ~--~g~~~~~~~n~~--g~Da-~~~GNHEfD~G--~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgvi 134 (285)
T cd07405 62 Q--DAEPDFRGMNLV--GYDA-MAVGNHEFDNP--LEVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVI 134 (285)
T ss_pred c--CcchHHHHHHhh--CCcE-EeecccccccC--HHHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEE
Confidence 0 111223444443 3333 46699999632 2223333322222211 001 112346667788866544
Q ss_pred -ecccc-cC--C----C---cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcE
Q 008826 335 -LGAYI-SY--D----K---SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDI 403 (552)
Q Consensus 335 -Ldt~~-~~--~----~---~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdl 403 (552)
+-+.. .. . . -....+=+++.+++.+..+...+|++.|............. .....+...+...+||+
T Consensus 135 G~t~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~~~--~~~~~lA~~~~~~giD~ 212 (285)
T cd07405 135 GLTTDDTAKIGNPAYFEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGSNA--PGDVEMARALPAGGLDL 212 (285)
T ss_pred EecccccccccCcCCcCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccccC--chHHHHHHhcCCCCCCE
Confidence 43311 00 0 0 01111222222222222356779999998875322100000 01122333322358999
Q ss_pred EEEccccCce
Q 008826 404 VFNGHVHAYE 413 (552)
Q Consensus 404 vlsGH~H~ye 413 (552)
+|.||.|...
T Consensus 213 IigGHsH~~~ 222 (285)
T cd07405 213 IVGGHSQDPV 222 (285)
T ss_pred EEeCCCCccc
Confidence 9999999754
No 78
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.92 E-value=2.9e-05 Score=81.32 Aligned_cols=74 Identities=18% Similarity=0.256 Sum_probs=47.3
Q ss_pred eEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 199 ~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
+||+++||+|++... ...++.+.+.+||+||++||+..... .. . ..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~----~~-------------~----~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRK----AI-------------T----QN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCC----CC-------------C----HH
Confidence 589999999987421 22344445789999999999984210 00 0 11
Q ss_pred HHHHHHH-HHHHhh-hcCCeEEecCCchhc
Q 008826 266 RWDYWGR-FMQNLV-SKVPIMVVEGNHEIE 293 (552)
Q Consensus 266 ~wd~~~~-~l~~l~-~~iP~~~v~GNHD~~ 293 (552)
......+ +++.+. ..+|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 2222222 244442 479999999999975
No 79
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.92 E-value=3.3e-05 Score=82.78 Aligned_cols=73 Identities=23% Similarity=0.409 Sum_probs=47.8
Q ss_pred eEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 199 ~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
+||++++|+|++... ...++.+.+.+||+||++||+... +.. .. .
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~p--------------~~--~ 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GSP--------------PS--Y 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CCC--------------cH--H
Confidence 589999999987421 123444556899999999999842 110 00 1
Q ss_pred HHHHHHHHHHHhh-hcCCeEEecCCchhc
Q 008826 266 RWDYWGRFMQNLV-SKVPIMVVEGNHEIE 293 (552)
Q Consensus 266 ~wd~~~~~l~~l~-~~iP~~~v~GNHD~~ 293 (552)
....+.++++.+. ..+|+++++||||..
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSV 87 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCCh
Confidence 1122344445543 368999999999975
No 80
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.89 E-value=3.1e-05 Score=72.74 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=39.1
Q ss_pred EEEeCCCCCCCh----------------HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 202 AIVGDLGLTYNT----------------TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 202 avigD~~~~~~~----------------~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
.+++|+|.+... ...++.+.+ .++|.|+++||++.. +.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 57 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFG------GK------------------ 57 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCC------CC------------------
Confidence 367888877532 123344443 268999999999942 21
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhc
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
...+ .+.++.+ ..|++.++||||..
T Consensus 58 ~~~~---~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 58 AGTE---LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred hHHH---HHHHHhC--CCCeEEEeCCCCch
Confidence 0111 3334433 46899999999974
No 81
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=97.77 E-value=3.2e-05 Score=75.88 Aligned_cols=37 Identities=27% Similarity=0.405 Sum_probs=27.2
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHhC-CCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSSN-EPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~~-~pDfvl~~GDl~Y 236 (552)
|++++||+|..... .++++++... +.|-++++||+++
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 89999999986432 3345554323 5789999999994
No 82
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.74 E-value=0.00056 Score=75.81 Aligned_cols=185 Identities=16% Similarity=0.145 Sum_probs=99.9
Q ss_pred CceEEEEEeCCCCCCC------------h----HHHHHHHHhC-CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcc
Q 008826 197 YPKRIAIVGDLGLTYN------------T----TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259 (552)
Q Consensus 197 ~~~rfavigD~~~~~~------------~----~~~l~~l~~~-~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~ 259 (552)
..++|++.+|+|.... . ...++++.+. +..++|.+||++..+...+
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~----------------- 87 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSD----------------- 87 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccc-----------------
Confidence 4799999999997533 1 1234555444 4468999999995421110
Q ss_pred ccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC------C---CCCCCcceEEEEcCeE
Q 008826 260 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE------E---SGSLSSFYYSFNAGGI 330 (552)
Q Consensus 260 ~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~------~---~~~~~~~yYsf~~G~v 330 (552)
+........+.|..+. .=..++||||+... ...+..+.+...+|.- . .....+.|.-++.+++
T Consensus 88 ---~~~~g~~~~~~mN~m~---yDa~tiGNHEFd~g--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~ 159 (517)
T COG0737 88 ---YLTKGEPTVDLLNALG---YDAMTLGNHEFDYG--LEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGV 159 (517)
T ss_pred ---cccCCChHHHHHhhcC---CcEEeecccccccC--HHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCe
Confidence 0011122334454431 22578999999632 2334444444444410 1 1123356888899986
Q ss_pred E--EEEeccc-c-cC---C-----CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH
Q 008826 331 H--FIMLGAY-I-SY---D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS 398 (552)
Q Consensus 331 ~--fI~Ldt~-~-~~---~-----~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~ 398 (552)
+ +|.+.+. . .+ . .-....+++++.+.+.+.....-+|++.|.+........... ........
T Consensus 160 KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~-~~~~~~~~----- 233 (517)
T COG0737 160 KIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEV-PGDVDVAV----- 233 (517)
T ss_pred EEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccc-cccccccc-----
Confidence 5 4554431 1 01 1 123455666666666554436779999999876542211110 00000000
Q ss_pred cCCcEEEEccccCc
Q 008826 399 YGVDIVFNGHVHAY 412 (552)
Q Consensus 399 ~~VdlvlsGH~H~y 412 (552)
.++|+++.||.|.+
T Consensus 234 ~~iD~i~~GH~H~~ 247 (517)
T COG0737 234 PGIDLIIGGHSHTV 247 (517)
T ss_pred cCcceEeccCCccc
Confidence 34999999999954
No 83
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.65 E-value=0.00085 Score=74.86 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=57.2
Q ss_pred EEecCCchhcccccCcchHHhhhhcCCCCCC------CC----CCCcceEEEEcCeE--EEEEeccccc-C---CCc---
Q 008826 284 MVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE------SG----SLSSFYYSFNAGGI--HFIMLGAYIS-Y---DKS--- 344 (552)
Q Consensus 284 ~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~----~~~~~yYsf~~G~v--~fI~Ldt~~~-~---~~~--- 344 (552)
+.++||||+.. +...+..+.+...+|--. .. ..-..|.-++.+++ -||.|.+... . ...
T Consensus 85 a~~lGNHEFd~--G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~ 162 (550)
T TIGR01530 85 FFTLGNHEFDA--GNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDI 162 (550)
T ss_pred EEEeccccccC--CHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCce
Confidence 67899999863 223344444443333210 00 11235666788874 4666644211 0 000
Q ss_pred --HHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCce
Q 008826 345 --GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYE 413 (552)
Q Consensus 345 --~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 413 (552)
....+=+++..+..++.....+|++.|..... . ..+.++. +||++|.||+|..-
T Consensus 163 ~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 163 KFIDEIAAAQIAANALKQQGINKIILLSHAGFEK--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred EECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 01112222222222223567799999965321 1 1233333 79999999999853
No 84
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.60 E-value=0.00085 Score=74.98 Aligned_cols=185 Identities=17% Similarity=0.164 Sum_probs=90.2
Q ss_pred CceEEEEEeCCCCCCC--------h---HHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 197 YPKRIAIVGDLGLTYN--------T---TCTINHMSSN----EP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 197 ~~~rfavigD~~~~~~--------~---~~~l~~l~~~----~p-Dfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
..++|++++|+|.... . ...++++.+. ++ -+++.+||+...... .
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-------------------s 93 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 93 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-------------------h
Confidence 4799999999997532 1 2234444421 33 478899999842110 0
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC-------CCC-CCCcceEEEEcCeEEE
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------ESG-SLSSFYYSFNAGGIHF 332 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~~~-~~~~~yYsf~~G~v~f 332 (552)
..+ ......+.|+.+ ..- +.++||||+... ...+..+.....+|-- ..+ ..-..|.-++.+++++
T Consensus 94 ~~~--~g~~~i~~mN~~--g~D-a~tlGNHEFD~G--~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kI 166 (551)
T PRK09558 94 DLQ--DAEPDFRGMNLI--GYD-AMAVGNHEFDNP--LSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKI 166 (551)
T ss_pred hhc--CCchhHHHHhcC--CCC-EEcccccccCcC--HHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEE
Confidence 000 011223444443 333 455799998632 2233333333333321 001 1123466678888665
Q ss_pred EEec--cccc--C-CC-------cHHHHHHHHHHHhcccC-CCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc
Q 008826 333 IMLG--AYIS--Y-DK-------SGHQYKWLEKDLANVDR-SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY 399 (552)
Q Consensus 333 I~Ld--t~~~--~-~~-------~~~Q~~WL~~~L~~~~r-~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~ 399 (552)
-++. +... . .. -....+-+++.+++.+. .+...+|++.|.......... .... .-..|.++.
T Consensus 167 giiG~~t~~~~~~~~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~----~d~~la~~~ 241 (551)
T PRK09558 167 AVIGLTTEDTAKIGNPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAP----GDVEMARSL 241 (551)
T ss_pred EEEEEeccccccccCCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCc----cHHHHHHhC
Confidence 4443 2110 0 00 01112223333333321 356779999998875322110 0000 002233333
Q ss_pred ---CCcEEEEccccCc
Q 008826 400 ---GVDIVFNGHVHAY 412 (552)
Q Consensus 400 ---~VdlvlsGH~H~y 412 (552)
+||++|.||.|..
T Consensus 242 ~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 242 PAGGLDMIVGGHSQDP 257 (551)
T ss_pred CccCceEEEeCCCCcc
Confidence 7999999999975
No 85
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.53 E-value=0.0012 Score=68.47 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=25.3
Q ss_pred eEEEEEeCCCCCCC----h---HHHHHHHHhC----C-CCEEEEcCCccc
Q 008826 199 KRIAIVGDLGLTYN----T---TCTINHMSSN----E-PDLVLLVGDVTY 236 (552)
Q Consensus 199 ~rfavigD~~~~~~----~---~~~l~~l~~~----~-pDfvl~~GDl~Y 236 (552)
++|++.+|+|.... . ...++++.+. . .-+++.+||+..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~q 50 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFI 50 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCcccc
Confidence 47899999997632 1 2345555432 3 348899999984
No 86
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.51 E-value=0.00031 Score=64.71 Aligned_cols=52 Identities=13% Similarity=-0.079 Sum_probs=32.3
Q ss_pred EEEEcCCCcccCCCC-CC----chhHHHHHHHHHHHHHcCCcEEEEcccc-Cceeeeec
Q 008826 366 LVATWHPPWYSSYSS-HY----REAECMRVEMEALLYSYGVDIVFNGHVH-AYERSNRV 418 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~-~~----~~~~~~r~~l~~ll~~~~VdlvlsGH~H-~yeR~~pv 418 (552)
-|++.|.|++..... .. .....-...+.+++++.+..+.|+||.| .|||- |-
T Consensus 71 DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf 128 (150)
T cd07380 71 DILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PY 128 (150)
T ss_pred CEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-Cc
Confidence 477778777654211 00 0001113466778888899999999999 66664 53
No 87
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.46 E-value=0.00024 Score=66.95 Aligned_cols=70 Identities=21% Similarity=0.435 Sum_probs=42.9
Q ss_pred EEEeCCCCCCCh--------------HHHHHH----HHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 202 AIVGDLGLTYNT--------------TCTINH----MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 202 avigD~~~~~~~--------------~~~l~~----l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
++++|+|++... ..++++ +.+.+||.++++||+++... +. .
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~----~~----------------~- 59 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFG----GL----------------S- 59 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccc----cc----------------C-
Confidence 368899887421 123333 34578999999999995311 10 0
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhc
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
...+.... .+......+|++.++||||..
T Consensus 60 ~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 60 RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 11222222 333345678999999999974
No 88
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=97.42 E-value=0.0015 Score=66.62 Aligned_cols=183 Identities=22% Similarity=0.292 Sum_probs=101.9
Q ss_pred eEEEEEeCCCCCC-ChHHHHHHHHhC---CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTY-NTTCTINHMSSN---EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 199 ~rfavigD~~~~~-~~~~~l~~l~~~---~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+||+|-|+.|... +...++..+.+. +.|++|++||+---. |+..-.| -.+...|+..-+.|.-.-
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavR----n~~D~~s-------iavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVR----NEQDLKS-------IAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhc----chhhccc-------ccCCHHHHHHHHHHHHhC
Confidence 5899999999764 334566666654 789999999996321 2221111 112233432222222122
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEE-----EEcCeEEEEEeccc---ccCCCc--
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYS-----FNAGGIHFIMLGAY---ISYDKS-- 344 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYs-----f~~G~v~fI~Ldt~---~~~~~~-- 344 (552)
.++.+.+|.+++-||||..+ |.. .+|..+ -...+.||- .++||+|+-.|..- .+|..+
T Consensus 70 ge~~APVlTIFIGGNHEAsn---------yL~--eLpyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~ 137 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN---------YLQ--ELPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHF 137 (456)
T ss_pred CcccCceeEEEecCchHHHH---------HHH--hcccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCCC
Confidence 34567899999999999842 322 233321 112345553 67899999988762 233210
Q ss_pred ---------------HHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchh-HHH----------------HHHH
Q 008826 345 ---------------GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREA-ECM----------------RVEM 392 (552)
Q Consensus 345 ---------------~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~-~~~----------------r~~l 392 (552)
-.+++ ...|++. +.|-=|+++|.=+.... .++.. ..+ ...+
T Consensus 138 E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~~ 210 (456)
T KOG2863|consen 138 EWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPAL 210 (456)
T ss_pred CCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChHH
Confidence 11111 1233443 23445777786332221 11111 111 2467
Q ss_pred HHHHHHcCCcEEEEccccC
Q 008826 393 EALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 393 ~~ll~~~~VdlvlsGH~H~ 411 (552)
++||++.+...+|+.|.|.
T Consensus 211 ~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 211 EELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHhCcchhhhhhHhh
Confidence 8899999999999999993
No 89
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.31 E-value=0.0069 Score=69.94 Aligned_cols=59 Identities=17% Similarity=0.085 Sum_probs=32.7
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 412 (552)
+.+++...+.+......+|++.|.-+.........+ .. -..|..--+||++|.||.|..
T Consensus 296 eaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~E--n~---~~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 296 EAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEE--NV---GYQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCccccccccccc--ch---hhHHhcCCCCCEEEECCCCCc
Confidence 334444444333457789999998764321111111 11 112222248999999999974
No 90
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.20 E-value=0.005 Score=74.71 Aligned_cols=48 Identities=25% Similarity=0.217 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCce
Q 008826 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYE 413 (552)
Q Consensus 361 ~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 413 (552)
.+...+|++.|............ .....+|.++. +||+++.||.|...
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~~-----en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSGA-----EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCCc-----chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 46778999999886543211111 12233455444 89999999999764
No 91
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.16 E-value=0.012 Score=67.93 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=27.8
Q ss_pred CceEEEEEeCCCCCCC-----------------hHHHHHHHHhCCC-CEEEEcCCcccc
Q 008826 197 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEP-DLVLLVGDVTYA 237 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-----------------~~~~l~~l~~~~p-Dfvl~~GDl~Y~ 237 (552)
..++|+..+|+|.... ....++++.+..+ -++|..||++..
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 3689999999997521 1234555554444 488899999953
No 92
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.13 E-value=0.0075 Score=54.90 Aligned_cols=38 Identities=26% Similarity=0.252 Sum_probs=24.4
Q ss_pred EEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccC
Q 008826 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.|+++|.|.-+.. +.+ + .......+.++++.+.||.|+
T Consensus 110 ~~~LsHyP~~~~~--~~~----~--~~r~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 110 DVYLSHYPRPGQD--HPG----M--ESRFDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred EEEEEeCCCCCCC--Ccc----h--hhhHHHHhccCCeEEeccccc
Confidence 6899999965432 111 1 111223355799999999998
No 93
>PHA02239 putative protein phosphatase
Probab=97.09 E-value=0.0013 Score=65.23 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=42.7
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
+|++++||+|..... .+.++.+... ..|.++++||+++. |.. .. ..+..+++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDr------G~~------------------s~-~v~~~l~~ 55 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDR------GKR------------------SK-DVVNYIFD 55 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCC------CCC------------------hH-HHHHHHHH
Confidence 478999999965322 3345555332 35999999999952 321 00 11222233
Q ss_pred HhhhcCCeEEecCCchhc
Q 008826 276 NLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~ 293 (552)
.+....+++++.||||..
T Consensus 56 ~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 56 LMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred HhhcCCCeEEEECCcHHH
Confidence 223346799999999974
No 94
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.03 E-value=0.0018 Score=63.88 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=46.7
Q ss_pred eEEEEEeCCCCCCCh--------------HHHHHHHH----hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 199 KRIAIVGDLGLTYNT--------------TCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 199 ~rfavigD~~~~~~~--------------~~~l~~l~----~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
-+.++++|+|.+... .++++++. +.+||.++++||+.+... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~-----~--------------- 74 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK-----K--------------- 74 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC-----C---------------
Confidence 368899999987421 13444443 468999999999995311 0
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhc
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
...|..+.++++.+ ..+++.++||||..
T Consensus 75 ---~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 75 ---GLEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred ---hHHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 02344455555554 36999999999963
No 95
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.02 E-value=0.001 Score=67.47 Aligned_cols=67 Identities=24% Similarity=0.373 Sum_probs=43.1
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
++++++||+|..... ..+++++. +.+.|.++++||++.. |.. + ....+.+..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdr------Gp~------------------s--~~vl~~l~~ 54 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNR------GPD------------------S--LEVLRFVKS 54 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCC------CcC------------------H--HHHHHHHHh
Confidence 468999999976432 23444442 2468999999999942 321 0 123334443
Q ss_pred hhhcCCeEEecCCchhc
Q 008826 277 LVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~ 293 (552)
+ ..++.+|.||||..
T Consensus 55 l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 55 L--GDSAVTVLGNHDLH 69 (275)
T ss_pred c--CCCeEEEecChhHH
Confidence 3 35689999999984
No 96
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=96.92 E-value=0.002 Score=63.87 Aligned_cols=68 Identities=22% Similarity=0.344 Sum_probs=42.5
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHH---h-------CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHH
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMS---S-------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 268 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~---~-------~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd 268 (552)
||+++||+|..... .++++++. + .+.|.++++||+++. |.. -.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr------G~~--------------------s~ 55 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR------GPD--------------------SP 55 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC------CCC--------------------HH
Confidence 79999999986432 23444441 1 136899999999942 321 12
Q ss_pred HHHHHHHHhhhcCCeEEecCCchhc
Q 008826 269 YWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 269 ~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
+..+++..+...-.+..+.||||..
T Consensus 56 evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 56 EVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHhhCCcEEEEECCcHHH
Confidence 2334444443344688999999974
No 97
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.78 E-value=0.029 Score=63.85 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=27.6
Q ss_pred CceEEEEEeCCCCCCC-----------------hHHHHHHHHhCCC-CEEEEcCCcccc
Q 008826 197 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEP-DLVLLVGDVTYA 237 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-----------------~~~~l~~l~~~~p-Dfvl~~GDl~Y~ 237 (552)
..++|+..+|+|.... ....++++.+..+ -++|..||++..
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qG 82 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQG 82 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCC
Confidence 3699999999996421 1234555554444 478899999953
No 98
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.77 E-value=0.027 Score=60.24 Aligned_cols=90 Identities=17% Similarity=0.323 Sum_probs=55.7
Q ss_pred CceEEEEEeCCCCCCC------hHHHHHHHHh-----CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 197 YPKRIAIVGDLGLTYN------TTCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 197 ~~~rfavigD~~~~~~------~~~~l~~l~~-----~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
..+++++++|.|.+.. +...++.+.- .+...++.+||+++.-+-. .|.. .+..+..-| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiY-pgq~--------~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIY-PGQE--------EELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccc-cCcc--------cccccccch-H
Confidence 3688999999998642 1223444431 2347899999999521110 1111 111122222 3
Q ss_pred HHHHHHHHHHHhhhcCCeEEecCCchhcccc
Q 008826 266 RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA 296 (552)
Q Consensus 266 ~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~ 296 (552)
+++.+.+++..+-..+-+++.|||||.....
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCccccc
Confidence 5667777888777888899999999986543
No 99
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.77 E-value=0.02 Score=57.46 Aligned_cols=192 Identities=15% Similarity=0.216 Sum_probs=96.0
Q ss_pred EEEEeCCCCCCCh------HHHHHHHHh-----------CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 201 IAIVGDLGLTYNT------TCTINHMSS-----------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 201 favigD~~~~~~~------~~~l~~l~~-----------~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
++++||+|.+.+. +..++.|.- .+..-+|++||.+.......+......+ .........
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~---~~~~~~~~~- 77 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARY---LTKKSSAAS- 77 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhc---cccccchhh-
Confidence 7899999987652 122333321 1334799999999542110000000000 000000111
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhcccccC-cch-HHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccc--
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTF-VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI-- 339 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~-~~f-~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~-- 339 (552)
....+.+..++..+.+.+|+...|||||-....-. ..+ ..+..+-....+ -....| -|.|+++|++|++.....
T Consensus 78 ~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~-~~~vtN-P~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 78 VEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYST-LNLVTN-PYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCC-cEEeCC-CeEEEECCEEEEEECCCCHH
Confidence 23456677788888899999999999998644211 111 111100000000 001122 356999999999988742
Q ss_pred ---cCCCcHHHHHHHHHHHhcccCC-CCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 340 ---SYDKSGHQYKWLEKDLANVDRS-VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 340 ---~~~~~~~Q~~WL~~~L~~~~r~-~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
.|.....-++.|++.|+.-.-. .+|=.+ +.|... +. .+++-+.-.+++|+||.|.|+-.
T Consensus 156 Di~ky~~~~~~l~~me~~L~wrHlaPTaPDTL-----~~yP~~-----~~-------Dpfvi~~~PhVyf~Gnq~~f~t~ 218 (257)
T cd07387 156 DILKYSSLESRLDILERTLKWRHIAPTAPDTL-----WCYPFT-----DR-------DPFILEECPHVYFAGNQPKFGTK 218 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHhcccCCCCCCcc-----ccccCC-----CC-------CceeecCCCCEEEeCCCcceeee
Confidence 1333445577788877651000 000000 111100 00 01222345899999999998765
No 100
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.66 E-value=0.0046 Score=61.79 Aligned_cols=69 Identities=23% Similarity=0.291 Sum_probs=40.9
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHh---------CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHH
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSS---------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 268 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~---------~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd 268 (552)
+|++++||+|..... .++++++.- ..-|.++++||+++. |.. + .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDR------Gp~------------------S--~ 54 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDR------GPH------------------S--L 54 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCC------CcC------------------h--H
Confidence 378999999976432 223333221 124789999999952 331 0 1
Q ss_pred HHHHHHHHhhhcCCeEEecCCchhc
Q 008826 269 YWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 269 ~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
...+.+..+...-.++++.||||..
T Consensus 55 ~vl~~~~~~~~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 55 RMIEIVWELVEKKAAYYVPGNHCNK 79 (245)
T ss_pred HHHHHHHHHhhCCCEEEEeCccHHH
Confidence 1223333333345789999999963
No 101
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.63 E-value=0.036 Score=62.88 Aligned_cols=46 Identities=26% Similarity=0.189 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCc
Q 008826 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAY 412 (552)
Q Consensus 361 ~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 412 (552)
.....+|++.|............+ . .. ..+.+. +||+++.||+|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~~e--n---~~-~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPGAE--N---SA-YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCccccccc--h---HH-HHHhcCCCCCEEEcCCCCcc
Confidence 456779999998765321111111 1 11 123443 8999999999974
No 102
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=96.32 E-value=0.0075 Score=59.90 Aligned_cols=140 Identities=21% Similarity=0.355 Sum_probs=85.5
Q ss_pred HhhhcCCeEEecCCchhcccccCc-------chHHhhhhcC-------CCCCC-CCCCCcceEEEEcCeEEEEEeccccc
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQ-------TFVAYSSRFA-------FPSEE-SGSLSSFYYSFNAGGIHFIMLGAYIS 340 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~-------~f~~y~~~f~-------~P~~~-~~~~~~~yYsf~~G~v~fI~Ldt~~~ 340 (552)
++...+|+|+-.||||.....-.. ....|.+.+. -|... .-.....-||+++|++|.+-+-+...
T Consensus 166 ~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~G 245 (392)
T COG5555 166 NIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIG 245 (392)
T ss_pred CceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeecc
Confidence 344569999999999997543211 1223322221 11110 11233557999999999988766432
Q ss_pred CCC--cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch----------------hHHHHHHHHHHHHHcCCc
Q 008826 341 YDK--SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE----------------AECMRVEMEALLYSYGVD 402 (552)
Q Consensus 341 ~~~--~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~----------------~~~~r~~l~~ll~~~~Vd 402 (552)
-.. ...-+-||+.+|........| ++++.|.-+-.-....++. ....|.++...++.|+|.
T Consensus 246 d~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvv 324 (392)
T COG5555 246 DAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVV 324 (392)
T ss_pred ccCCCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeE
Confidence 111 223467999999876544444 8888887653321111110 112477888999999999
Q ss_pred EEEEccccCceeee
Q 008826 403 IVFNGHVHAYERSN 416 (552)
Q Consensus 403 lvlsGH~H~yeR~~ 416 (552)
..+.||.|.....+
T Consensus 325 g~fhGhkhd~~may 338 (392)
T COG5555 325 GTFHGHKHDFNMAY 338 (392)
T ss_pred Eeccccccccceee
Confidence 99999999764433
No 103
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.21 E-value=0.0082 Score=58.86 Aligned_cols=37 Identities=32% Similarity=0.507 Sum_probs=26.6
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHH-hCCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~-~~~pDfvl~~GDl~Y 236 (552)
|++++||+|..... .++++.+. +.+.|.++++||+++
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 89999999976432 23334433 246899999999995
No 104
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.14 E-value=0.009 Score=58.77 Aligned_cols=66 Identities=18% Similarity=0.300 Sum_probs=40.0
Q ss_pred EEEeCCCCCCCh-HHHHHHHHhC--------CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 202 AIVGDLGLTYNT-TCTINHMSSN--------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 202 avigD~~~~~~~-~~~l~~l~~~--------~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
.++||+|..... .+.++++... ..|.++++||+++. |.. + ....+
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR------Gp~------------------S--~~vl~ 55 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR------GPE------------------I--RELLE 55 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC------CCC------------------H--HHHHH
Confidence 589999986432 2344444211 35899999999942 321 0 12334
Q ss_pred HHHHhhhcCCeEEecCCchhc
Q 008826 273 FMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~ 293 (552)
.+..+...-.++.+.||||..
T Consensus 56 ~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 56 IVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred HHHHhhcCCCEEEEEccCcHH
Confidence 444443334688999999974
No 105
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=96.11 E-value=0.18 Score=49.50 Aligned_cols=193 Identities=18% Similarity=0.251 Sum_probs=102.5
Q ss_pred eEEEEEeCCCCCCChHHH---HHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNTTCT---INHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 199 ~rfavigD~~~~~~~~~~---l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+|++++||+=....-..+ +..+. +.++||||..|-++- +|.+. .|+.+..++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa------~G~Gi------------------t~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAA------GGFGI------------------TEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCcccc------CCcCC------------------CHHHHHHHH
Confidence 589999998655433332 33344 358999999999882 34321 233344443
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC-CCCCcceEEEEcCeEEEEEec--ccccCCC-cHHHHHH
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-GSLSSFYYSFNAGGIHFIMLG--AYISYDK-SGHQYKW 350 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-~~~~~~yYsf~~G~v~fI~Ld--t~~~~~~-~~~Q~~W 350 (552)
+ +.+- +++.|||=+..... ..|..-..++--|.+-+ +..+..|+-|...+..+.+.+ ....... -..-.+=
T Consensus 57 ~---~G~d-viT~GNH~wd~~ei-~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~ 131 (266)
T COG1692 57 E---AGAD-VITLGNHTWDQKEI-LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKA 131 (266)
T ss_pred H---hCCC-EEecccccccchHH-HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHH
Confidence 3 2344 46799998753210 11111112222333321 233455666777665554444 3322211 2223444
Q ss_pred HHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEE
Q 008826 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (552)
Q Consensus 351 L~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vy 430 (552)
+++.|...+ .+++.+||-+|.=..+. ..+| -++.+-.|.+|+-=|+|.-.- +..+-++|+.|
T Consensus 132 ~d~l~~~~~-~~~~~iiVDFHAEtTSE-----------K~a~-g~yldGrvsavvGTHTHV~Ta-----D~rIL~~GTay 193 (266)
T COG1692 132 ADKLLDEIK-LGTDLIIVDFHAETTSE-----------KNAF-GWYLDGRVSAVVGTHTHVPTA-----DERILPKGTAY 193 (266)
T ss_pred HHHHHHhCc-cCCceEEEEccccchhh-----------hhhh-heEEcCeEEEEEeccCccccc-----cceecCCCcEE
Confidence 566666654 35577999999532221 1111 122344799999999995322 22234689999
Q ss_pred EEE-CCCCC
Q 008826 431 ITI-GDGGN 438 (552)
Q Consensus 431 iv~-G~gG~ 438 (552)
++- |.-|.
T Consensus 194 iTDvGMtG~ 202 (266)
T COG1692 194 ITDVGMTGP 202 (266)
T ss_pred EecCccccc
Confidence 873 55444
No 106
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.03 E-value=0.011 Score=59.46 Aligned_cols=64 Identities=25% Similarity=0.352 Sum_probs=40.8
Q ss_pred EEEeCCCCCCCh-HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhh
Q 008826 202 AIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 279 (552)
Q Consensus 202 avigD~~~~~~~-~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~ 279 (552)
.++||+|..... .++++++.- .+.|.++++||++.. |.. + .+..+++..+.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdR------Gp~------------------s--~evl~~l~~l~- 54 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNR------GPD------------------S--LETLRFVKSLG- 54 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCC------CcC------------------H--HHHHHHHHhcC-
Confidence 589999986432 334455432 357999999999942 321 1 12334444432
Q ss_pred cCCeEEecCCchhc
Q 008826 280 KVPIMVVEGNHEIE 293 (552)
Q Consensus 280 ~iP~~~v~GNHD~~ 293 (552)
..+..+.||||..
T Consensus 55 -~~v~~VlGNHD~~ 67 (257)
T cd07422 55 -DSAKTVLGNHDLH 67 (257)
T ss_pred -CCeEEEcCCchHH
Confidence 4688999999984
No 107
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=95.94 E-value=0.096 Score=51.95 Aligned_cols=189 Identities=16% Similarity=0.237 Sum_probs=89.5
Q ss_pred EEEeCCCCCCCh---HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 202 AIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 202 avigD~~~~~~~---~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+++||.=....- ...+..+.+ .++||||..|.++- .|... ....+.+++
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa------~G~Gi------------------t~~~~~~L~--- 53 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAA------GGFGI------------------TPKIAEELF--- 53 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTT------TTSS--------------------HHHHHHHH---
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccC------CCCCC------------------CHHHHHHHH---
Confidence 367776433221 223444443 58999999999983 34321 011222222
Q ss_pred hhcCCeEEecCCchhcccccCcchHHhhhh---cCCCCCCC-CCCCcceEEEEcCeEEEEEecc--cccCCCcHHHHHHH
Q 008826 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSR---FAFPSEES-GSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYKWL 351 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~---f~~P~~~~-~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~WL 351 (552)
...+- ..+.|||=+.. +....|... .--|.|-+ +..+..|..++.++.++-++|- +........-+..+
T Consensus 54 ~~GvD-viT~GNH~wdk----kei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~ 128 (253)
T PF13277_consen 54 KAGVD-VITMGNHIWDK----KEIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAA 128 (253)
T ss_dssp HHT-S-EEE--TTTTSS----TTHHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHH
T ss_pred hcCCC-EEecCcccccC----cHHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHH
Confidence 23444 46789998853 222333322 22343322 3456778899999877777664 22222222334445
Q ss_pred HHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEE
Q 008826 352 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431 (552)
Q Consensus 352 ~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyi 431 (552)
++.|++. +.+++.+||=+|.=. .....+| -.+.+-+|.+|+--|+|.- ..+..+-|+|+-||
T Consensus 129 d~~l~~l-~~~~~~iiVDFHAEa-----------TSEK~A~-g~~lDGrvsaV~GTHTHVq-----TaDerILp~GTaYi 190 (253)
T PF13277_consen 129 DRLLEEL-KEETDIIIVDFHAEA-----------TSEKQAM-GWYLDGRVSAVVGTHTHVQ-----TADERILPGGTAYI 190 (253)
T ss_dssp HHHHHH------SEEEEEEE-S------------HHHHHHH-HHHHBTTBSEEEEESSSS------BS--EE-TTS-EEE
T ss_pred HHHHHhc-cccCCEEEEEeecCc-----------HHHHHHH-HHHhCCcEEEEEeCCCCcc-----CchhhccCCCCEEE
Confidence 5555554 246778999988421 1112222 3445668999999999952 12222247899999
Q ss_pred E-ECCCCCcc
Q 008826 432 T-IGDGGNLE 440 (552)
Q Consensus 432 v-~G~gG~~~ 440 (552)
+ +|.-|...
T Consensus 191 TDvGMtG~~d 200 (253)
T PF13277_consen 191 TDVGMTGPYD 200 (253)
T ss_dssp S---EBEESS
T ss_pred ecCccccCcc
Confidence 7 46666643
No 108
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=95.91 E-value=0.012 Score=57.36 Aligned_cols=65 Identities=17% Similarity=0.230 Sum_probs=39.7
Q ss_pred EEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhh-c
Q 008826 203 IVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS-K 280 (552)
Q Consensus 203 vigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~-~ 280 (552)
++||+|..... ..+++.+.....|.++++||++.. |.. .....+.+..+.. .
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdr------g~~--------------------~~~~l~~l~~~~~~~ 55 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDR------GPD--------------------SVEVIDLLLALKILP 55 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCC------CCC--------------------cHHHHHHHHHhcCCC
Confidence 78999975322 233444444578999999999942 321 0122233333211 4
Q ss_pred CCeEEecCCchhc
Q 008826 281 VPIMVVEGNHEIE 293 (552)
Q Consensus 281 iP~~~v~GNHD~~ 293 (552)
.+++.+.||||..
T Consensus 56 ~~~~~l~GNHe~~ 68 (225)
T cd00144 56 DNVILLRGNHEDM 68 (225)
T ss_pred CcEEEEccCchhh
Confidence 5799999999985
No 109
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=95.87 E-value=0.036 Score=44.61 Aligned_cols=76 Identities=21% Similarity=0.339 Sum_probs=46.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
+|+.+++.-. ..+++.|+|...... +. ....-.|+|....+.... ..... ++..
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~-~~-------~~~~y~v~~~~~~~~~~~----~~~~~-------------~~~~ 55 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSG-NG-------PITGYRVEYRSVNSTSDW----QEVTV-------------PGNE 55 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSST-SS-------SESEEEEEEEETTSSSEE----EEEEE-------------ETTS
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCC-CC-------CeeEEEEEEEecccceee----eeeee-------------eeee
Confidence 4777777665 479999999997511 11 113456677655443310 11111 1112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
+.++|++|+|+|.|.++|..-+
T Consensus 56 ~~~~i~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 56 TSYTITGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp SEEEEESCCTTSEEEEEEEEEE
T ss_pred eeeeeccCCCCCEEEEEEEEEe
Confidence 3788899999999999998544
No 110
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=95.86 E-value=0.13 Score=51.00 Aligned_cols=135 Identities=13% Similarity=0.168 Sum_probs=68.4
Q ss_pred HHHHHHhhhcCCeEEecCCchhcccccCcchHHhhh---hcCCCCCCCCCC---CcceEEEEcCeEE--EEEecccccCC
Q 008826 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEESGSL---SSFYYSFNAGGIH--FIMLGAYISYD 342 (552)
Q Consensus 271 ~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~~~~~---~~~yYsf~~G~v~--fI~Ldt~~~~~ 342 (552)
.+.|+. ..+-++.+.+||++... ...+....+ .-.++..+.+.. ...+..++.++++ |+.+.+.....
T Consensus 70 ~~~L~~--~G~d~~tlaNNH~fD~G--~~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~ 145 (239)
T cd07381 70 ADALKA--AGFDVVSLANNHTLDYG--EEGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGI 145 (239)
T ss_pred HHHHHH--hCCCEEEcccccccccc--hHHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCC
Confidence 344444 35666666669998633 222222221 223333222211 1345567777754 55554321110
Q ss_pred ----------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008826 343 ----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412 (552)
Q Consensus 343 ----------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 412 (552)
....-.+-+++.++++++. ...+||..|-...... ........+...+.+.++|+|+.||.|..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~ 219 (239)
T cd07381 146 PLAAGARPGGVNPLDLERIAADIAEAKKK-ADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVL 219 (239)
T ss_pred cCcccCCccccCccCHHHHHHHHHHHhhc-CCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcC
Confidence 0111123455555555433 7789999996432211 11122335555555679999999999976
Q ss_pred eee
Q 008826 413 ERS 415 (552)
Q Consensus 413 eR~ 415 (552)
+-.
T Consensus 220 q~~ 222 (239)
T cd07381 220 QGI 222 (239)
T ss_pred CCe
Confidence 543
No 111
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.67 E-value=0.028 Score=55.28 Aligned_cols=73 Identities=21% Similarity=0.441 Sum_probs=48.4
Q ss_pred eEEEEEeCCCCCCCh--------------H---HHHHHH-HhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 199 KRIAIVGDLGLTYNT--------------T---CTINHM-SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 199 ~rfavigD~~~~~~~--------------~---~~l~~l-~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
-+.++++|+|.+... . ..++++ .+.+|+-+|++||+-.+- +.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~~--------------- 79 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----GK--------------- 79 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----Cc---------------
Confidence 378999999998632 1 123322 357999999999998531 11
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhc
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
.....|+....+++.+... -++++.||||-+
T Consensus 80 -~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~ 110 (235)
T COG1407 80 -SLRQEKEEVREFLELLDER-EVIIIRGNHDNG 110 (235)
T ss_pred -cccccHHHHHHHHHHhccC-cEEEEeccCCCc
Confidence 0123566666666665443 599999999975
No 112
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.60 E-value=0.022 Score=57.69 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=26.7
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHH-hCCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~-~~~pDfvl~~GDl~Y 236 (552)
++.++||+|..... .+.++++. ....|-++++||++.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd 40 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA 40 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC
Confidence 46899999986532 34555554 235789999999994
No 113
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=95.49 E-value=0.029 Score=57.04 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=25.6
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHhC------CCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSSN------EPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~~------~pDfvl~~GDl~Y 236 (552)
++.++||+|..... ..+++.+.+. ..+.+|++||+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 68999999987532 3344444321 3568999999994
No 114
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=95.48 E-value=0.27 Score=48.76 Aligned_cols=136 Identities=13% Similarity=0.147 Sum_probs=67.4
Q ss_pred HHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhh---hcCCCCCCCCCC---CcceEEEEcCeEEEEEec--cccc-
Q 008826 270 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEESGSL---SSFYYSFNAGGIHFIMLG--AYIS- 340 (552)
Q Consensus 270 ~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~~~~~---~~~yYsf~~G~v~fI~Ld--t~~~- 340 (552)
..+.|+.+ .+-++.+.+|||+... ...+....+ ...++..+.+.. ...+..++.+++++-++. +...
T Consensus 65 ~~~~l~~~--G~d~~~laNNH~fD~G--~~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~ 140 (239)
T smart00854 65 NAAALKAA--GFDVVSLANNHSLDYG--EEGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNN 140 (239)
T ss_pred HHHHHHHh--CCCEEEeccCcccccc--hHHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCC
Confidence 34445443 5556666669999643 222222222 223333222111 134566778876654443 2110
Q ss_pred -CC-----C-----cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccc
Q 008826 341 -YD-----K-----SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 341 -~~-----~-----~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~ 409 (552)
+. . .....+=+++.+++++. +...+||+.|--...... . . .....+..-+.+.++|+|+.||.
T Consensus 141 ~~~~~~~~~g~~~~~~~~~~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~---p-~-~~~~~~A~~l~~~G~DvIiG~H~ 214 (239)
T smart00854 141 GWAASKDRPGVALLPDLDREKILADIARARK-KADVVIVSLHWGVEYQYE---P-T-DEQRELAHALIDAGADVVIGHHP 214 (239)
T ss_pred CcccCCCCCCeeecCcCCHHHHHHHHHHHhc-cCCEEEEEecCccccCCC---C-C-HHHHHHHHHHHHcCCCEEEcCCC
Confidence 10 0 00012234444444432 478899999976432211 0 1 11234444454579999999999
Q ss_pred cCceee
Q 008826 410 HAYERS 415 (552)
Q Consensus 410 H~yeR~ 415 (552)
|..+..
T Consensus 215 H~~~~~ 220 (239)
T smart00854 215 HVLQPI 220 (239)
T ss_pred CcCCce
Confidence 987644
No 115
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=94.19 E-value=0.11 Score=56.04 Aligned_cols=42 Identities=31% Similarity=0.454 Sum_probs=32.2
Q ss_pred CceEEEEEeCCCCCCC---------hHHHHHHH----HhCCCCEEEEcCCccccc
Q 008826 197 YPKRIAIVGDLGLTYN---------TTCTINHM----SSNEPDLVLLVGDVTYAN 238 (552)
Q Consensus 197 ~~~rfavigD~~~~~~---------~~~~l~~l----~~~~pDfvl~~GDl~Y~d 238 (552)
..+||++..|.|+++. +..++++| .+++.||||..||+...+
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 3699999999999874 22344443 357999999999999765
No 116
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=93.64 E-value=0.13 Score=53.20 Aligned_cols=22 Identities=9% Similarity=0.039 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHVH 410 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H 410 (552)
.++..+.+++++.++++=||.=
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~ 243 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHEA 243 (305)
T ss_pred HHHHHHHHHHcCCeEEEEeccc
Confidence 4678899999999999999985
No 117
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=93.47 E-value=1.2 Score=44.56 Aligned_cols=129 Identities=12% Similarity=0.152 Sum_probs=72.4
Q ss_pred hcCCeEEecCCchhcccccCcchH---HhhhhcCCCCCCCCC---CCcceEEEEcCeEEEEEecccccC---C-------
Q 008826 279 SKVPIMVVEGNHEIEAQAGNQTFV---AYSSRFAFPSEESGS---LSSFYYSFNAGGIHFIMLGAYISY---D------- 342 (552)
Q Consensus 279 ~~iP~~~v~GNHD~~~~~~~~~f~---~y~~~f~~P~~~~~~---~~~~yYsf~~G~v~fI~Ldt~~~~---~------- 342 (552)
..+-++.+.-||.+... .+.+. ...+...+...+.+. .......++.+++++-++...... .
T Consensus 74 ~G~d~vslANNH~~D~G--~~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~ 151 (250)
T PF09587_consen 74 AGFDVVSLANNHIFDYG--EEGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRP 151 (250)
T ss_pred cCCCEEEecCCCCcccc--HHHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCcccccccc
Confidence 36777888889987532 12221 122222333322211 123345677787666555432110 0
Q ss_pred -------------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccc
Q 008826 343 -------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 343 -------------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~ 409 (552)
....+.+.+++++++++ ++..++||+.|--..... .......++...+-+.|+|+|+.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~-----~p~~~q~~~a~~lidaGaDiIiG~Hp 225 (250)
T PF09587_consen 152 YGFSYRPDKAGLNPNRPGIERIKEDIREAR-KKADVVIVSLHWGIEYEN-----YPTPEQRELARALIDAGADIIIGHHP 225 (250)
T ss_pred ccccccccccccccccchHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC-----CCCHHHHHHHHHHHHcCCCEEEeCCC
Confidence 01234588888888876 567899999996422111 11122345555556689999999999
Q ss_pred cCceee
Q 008826 410 HAYERS 415 (552)
Q Consensus 410 H~yeR~ 415 (552)
|..+-.
T Consensus 226 Hv~q~~ 231 (250)
T PF09587_consen 226 HVIQPV 231 (250)
T ss_pred Ccccce
Confidence 976554
No 118
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=93.24 E-value=0.17 Score=51.35 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=25.1
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
+++++||+|..... .+.++.+.....+-++++||+++
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 66 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVD 66 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccC
Confidence 68999999976432 22333333345678999999994
No 119
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=93.21 E-value=0.85 Score=50.21 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=38.1
Q ss_pred cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcE-EEEccccCc
Q 008826 344 SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDI-VFNGHVHAY 412 (552)
Q Consensus 344 ~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~Vdl-vlsGH~H~y 412 (552)
.-.|.+|-.+.++. .+..-+|++.|.|.-.. .+ ....+..+...+ ++++ ||-||.|..
T Consensus 210 ei~~~~~~~~m~~~---~~idlii~lgH~~~~~~-----~e---~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 210 EITQSEWEQDMVNT---TDIDLIIALGHSPVRDD-----DE---WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HHhccchHHHHhhc---cCccEEEEecccccccc-----hh---hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 34678888888877 45566899999886321 11 111444454445 6888 999999953
No 120
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=92.91 E-value=0.24 Score=51.44 Aligned_cols=23 Identities=13% Similarity=0.192 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.++....+++++.++++=||.-.
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 56788999999999999999853
No 121
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=92.32 E-value=0.22 Score=50.86 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=20.1
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++.+.++++++++++=||.-.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCccc
Confidence 56888999999999999999853
No 122
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=92.15 E-value=0.21 Score=51.22 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++.+.+++++.++++=||.-.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCccc
Confidence 46888999999999999999853
No 123
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=91.73 E-value=0.31 Score=50.26 Aligned_cols=23 Identities=4% Similarity=0.033 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++++.+++.+.++++=||.-.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46888999999999999999853
No 124
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=91.13 E-value=0.32 Score=50.44 Aligned_cols=23 Identities=13% Similarity=0.238 Sum_probs=20.2
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++...+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 57888999999999999999854
No 125
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=90.90 E-value=0.45 Score=50.32 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~ 409 (552)
.+.+...|+++++++++=||.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 568889999999999999998
No 126
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=89.57 E-value=0.52 Score=48.40 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++...+++++.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46888999999999999999853
No 127
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.50 E-value=3.4 Score=37.67 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCC
Q 008826 390 VEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 390 ~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
+.+.-|-++.+||+.+.||+|.++... -+|-.||.-|++
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSa 135 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSA 135 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCcc
Confidence 356666778899999999999888774 367788877765
No 128
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=88.42 E-value=1.1 Score=46.55 Aligned_cols=21 Identities=10% Similarity=0.230 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~ 409 (552)
.+++...++++++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 468889999999999999997
No 129
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=87.96 E-value=0.92 Score=47.05 Aligned_cols=23 Identities=9% Similarity=0.105 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++.+.+++++.++++-||.-.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 46788999999999999999853
No 130
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=87.24 E-value=2.1 Score=50.82 Aligned_cols=97 Identities=20% Similarity=0.295 Sum_probs=52.3
Q ss_pred CCCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccc
Q 008826 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (552)
Q Consensus 71 ~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~ 150 (552)
+++..|++|.|.... +++++|+|.+..... ......-|.....++......+... ..|
T Consensus 614 ~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t----------~ng~itgYkIRy~~~~~~~~~~~t~------v~~----- 671 (1381)
T KOG4221|consen 614 VPSAPPQNLSLEVVS-STSVRVSWLPPPSET----------QNGQITGYKIRYRKLSREDEVNETV------VKG----- 671 (1381)
T ss_pred CCCCCCcceEEEecC-CCeEEEEccCCCccc----------ccceEEEEEEEecccCcccccceee------ccc-----
Confidence 445567778776554 899999998865321 0112223332222111111111110 001
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
+.+.| .+.+|+|+|.|.+||..... +..|++..+.|+-.
T Consensus 672 n~~~~--l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~ 713 (1381)
T KOG4221|consen 672 NTTQY--LFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPES 713 (1381)
T ss_pred chhhh--HhhcCCCCceEEEEEEEeccCCCCCcccceeccCccc
Confidence 01222 34679999999999864332 36788899988643
No 131
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=86.52 E-value=4.7 Score=46.18 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=31.2
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
...|+|+||+|||+|-+||..... ...|....|.|.+.
T Consensus 497 ~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 497 TTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred cceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 357899999999999999965432 36888999999886
No 132
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=86.31 E-value=5.9 Score=30.84 Aligned_cols=23 Identities=26% Similarity=0.479 Sum_probs=19.1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..++.+.+|.|++.|.++|....
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~~ 78 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAVN 78 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEEC
Confidence 46788899999999999996543
No 133
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=84.46 E-value=13 Score=37.53 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=22.9
Q ss_pred ceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcc
Q 008826 198 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVT 235 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~ 235 (552)
-.||+.++|.|.-... ++. -..-|+.+++||..
T Consensus 61 ~~r~VcisdtH~~~~~---i~~--~p~gDvlihagdfT 93 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD---IND--IPDGDVLIHAGDFT 93 (305)
T ss_pred ceEEEEecCcccccCc---ccc--CCCCceEEeccCCc
Confidence 3699999999954211 111 13468999999998
No 134
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=83.47 E-value=1 Score=43.50 Aligned_cols=82 Identities=13% Similarity=0.316 Sum_probs=42.3
Q ss_pred EEEEeCCCCCCCh--HHHHHHH----H-hCCCCEEEEcCCcccccccccC-CCCCCCCcCCCCCCccccccHHHH---HH
Q 008826 201 IAIVGDLGLTYNT--TCTINHM----S-SNEPDLVLLVGDVTYANLYLTN-GTGSDCYSCSFSKTPIHETYQPRW---DY 269 (552)
Q Consensus 201 favigD~~~~~~~--~~~l~~l----~-~~~pDfvl~~GDl~Y~d~~~~~-G~~~~cy~~~~~~~~~~e~y~~~w---d~ 269 (552)
|++++|.+.+.+. .+.++++ . +.+|+.+|++|+++........ +. ....+.... ..
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 67 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGS-------------VPDSYSFEEDFLKE 67 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT----------------HHCCHHHHHHHH
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCcccccccccc-------------ccccccccHHHHHH
Confidence 6889999987432 2233333 3 5679999999999964321100 00 000111111 12
Q ss_pred HHHHHHHhhhcCCeEEecCCchhccc
Q 008826 270 WGRFMQNLVSKVPIMVVEGNHEIEAQ 295 (552)
Q Consensus 270 ~~~~l~~l~~~iP~~~v~GNHD~~~~ 295 (552)
....+..+...++++.+||+||....
T Consensus 68 ~~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 68 LDSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp CHHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHHhhcccccEEEEeCCCcccccc
Confidence 23445555678999999999998643
No 135
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=80.24 E-value=9.9 Score=28.51 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=19.4
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
.+...|.+|+|++.|.++|..-.
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~~ 78 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAVN 78 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEEc
Confidence 46788999999999999987543
No 136
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=69.53 E-value=21 Score=41.24 Aligned_cols=123 Identities=23% Similarity=0.256 Sum_probs=71.1
Q ss_pred CCCceeEEeecC-CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceE-----EEEEE--EEeeeecccCC
Q 008826 74 FEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHE-----ATGHS--LVYDQLYPFEG 145 (552)
Q Consensus 74 ~~P~qi~l~~~~-~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~-----a~g~~--~~y~~~~p~~g 145 (552)
.++.-++++... +.+++.++|....+. +.. + -..-.+.|...+.+.... |-|.. ...+..+| ++
T Consensus 487 Ce~~~l~~~~~~~~~dsi~lrW~~~~~~-d~r-~-----llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~-~~ 558 (1025)
T KOG4258|consen 487 CEDLVLQFSSTVTSADSILLRWERYQPP-DMR-D-----LLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPP-DL 558 (1025)
T ss_pred cccceeeeeeEEeecceeEEEecccCCc-chh-h-----hheeeEeeccCCccccceecCccccccCcceEEeccCC-cC
Confidence 456666666654 458999999886542 000 0 012356777766432221 22221 12222222 22
Q ss_pred ccccccCeEEEEEeCCCCCCCEEEEEEecCCC-------CCCCceEEEEcCCCCCCCCCceEEEEEeCCC
Q 008826 146 LQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSI-------PAMSDVYYFRTLPASGPQSYPKRIAIVGDLG 208 (552)
Q Consensus 146 ~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~-------~~~S~~~~F~T~p~~~~~~~~~rfavigD~~ 208 (552)
.-+ ++.--...|.||+|.|.|-|-|..-.. .+.|++..++|.|...+. |+.++.-++..
T Consensus 559 ~p~--~~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~Psp--Pl~~ls~snsS 624 (1025)
T KOG4258|consen 559 IPN--DGTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSP--PLDVLSKSNSS 624 (1025)
T ss_pred CCc--cccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCC--cchhhhccCcc
Confidence 222 223336889999999999998754321 278999999999865443 67777666654
No 137
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=69.04 E-value=33 Score=40.97 Aligned_cols=92 Identities=24% Similarity=0.275 Sum_probs=51.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
+|..+.+ .+.+.++|.|+|.......|. ...-.|+|....++. +..... ...+..
T Consensus 822 ap~~~~~-~~~s~s~~~v~W~~~~~~nG~--------l~gY~v~Y~~~~~~~-----~~~~~~-----------~i~~~~ 876 (1051)
T KOG3513|consen 822 APTKLSA-KPLSSSEVNLSWKPPLWDNGK--------LTGYEVKYWKINEKE-----GSLSRV-----------QIAGNR 876 (1051)
T ss_pred CCcccee-ecccCceEEEEecCcCccCCc--------cceeEEEEEEcCCCc-----ccccce-----------eecCCc
Confidence 3444433 334468999999664433231 134578888766543 111110 112344
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
-.++|+||+|+|.|++.|.+-+. +..|...+-+|.+.
T Consensus 877 ~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~ 916 (1051)
T KOG3513|consen 877 TSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKA 916 (1051)
T ss_pred ceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCC
Confidence 67899999999999998864332 13344444445443
No 138
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=67.39 E-value=57 Score=39.48 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=28.6
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
.++.+|.||+|.|.|.|||...+. +..|+..+|+|+-
T Consensus 573 ~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 573 ATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLS 612 (1381)
T ss_pred ccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEecc
Confidence 467889999999999999975442 2456778888864
No 139
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=64.78 E-value=46 Score=34.00 Aligned_cols=80 Identities=14% Similarity=0.227 Sum_probs=49.7
Q ss_pred ceEEEEEeCCCCCCChHHHHHHHH---h---------CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 198 PKRIAIVGDLGLTYNTTCTINHMS---S---------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~l~~l~---~---------~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
..+|+++||.++.. ..+++++. + ..|-.+|+.|+++..-.. .+. ...+.|+.
T Consensus 27 ~~~~VilSDV~LD~--p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~--~~~------------~~~~~yk~ 90 (291)
T PTZ00235 27 RHNWIIMHDVYLDS--PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFD--YNR------------NFHKVYIK 90 (291)
T ss_pred ceEEEEEEeeccCC--HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCccc--CCC------------CchHHHHH
Confidence 46999999999874 23333322 1 238899999999843210 010 11234566
Q ss_pred HHHHHHH-HH---HHhhhcCCeEEecCCchhc
Q 008826 266 RWDYWGR-FM---QNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 266 ~wd~~~~-~l---~~l~~~iP~~~v~GNHD~~ 293 (552)
..+.+.. .+ ..|..+.-++.|||-.|-.
T Consensus 91 ~Fd~La~llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 91 GFEKLSVMLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHHHHHHHHhChHHHhcCeEEEECCCCCCC
Confidence 6666654 23 2356778899999999974
No 140
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=43.97 E-value=48 Score=33.00 Aligned_cols=34 Identities=18% Similarity=0.358 Sum_probs=20.4
Q ss_pred EEEEeCCCCCCChHHHHHHHH--hCCC-CEEEEcCCccc
Q 008826 201 IAIVGDLGLTYNTTCTINHMS--SNEP-DLVLLVGDVTY 236 (552)
Q Consensus 201 favigD~~~~~~~~~~l~~l~--~~~p-Dfvl~~GDl~Y 236 (552)
+.+.||+|... ...++-.. ..-| .=-+++||+++
T Consensus 45 vtvcGDIHGQf--~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 45 VTVCGDIHGQF--YDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cEEeecccchH--HHHHHHHHhCCCCCCCceEeecchhc
Confidence 56899999753 33333222 1122 24678999995
No 141
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=43.59 E-value=26 Score=32.35 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=24.3
Q ss_pred EEEEeCCCCCCCEEEEE--EecCCCCCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQ--CGDPSIPAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~--v~~~~~~~~S~~~~F~T~p~~ 192 (552)
-.=++++|.|||+||.+ |..+..+..|.+..-.|.|..
T Consensus 102 saYqVtNL~pGTkY~isY~VtkgtstESS~~i~msT~n~~ 141 (184)
T PF07353_consen 102 SAYQVTNLQPGTKYYISYLVTKGTSTESSNEIPMSTLNRK 141 (184)
T ss_pred eeEEeeccCCCcEEEEEEEEecCccceecceecccccccc
Confidence 34467999999999755 554443344455666666644
No 142
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=36.77 E-value=34 Score=35.76 Aligned_cols=22 Identities=14% Similarity=0.253 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHVH 410 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H 410 (552)
.+.+++++++.++|+++-+|.=
T Consensus 233 ~~~v~~f~~~~~ldlivRaHqv 254 (331)
T KOG0374|consen 233 PAVVEDFCKKLDLDLIVRAHQV 254 (331)
T ss_pred HHHHHHHHHHhCcceEEEcCcc
Confidence 4678888999999999999864
No 143
>COG4856 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.03 E-value=1e+02 Score=32.52 Aligned_cols=74 Identities=31% Similarity=0.332 Sum_probs=40.3
Q ss_pred ccccccccCcchhhHHHHHhhhHhhhhc-CCCCCCccCCCC---------CccccccccCCCCCCCCCCCCCcccccCCC
Q 008826 4 AFSNSYRMGGIFLFFIFLLSPLDIRATN-ANIPSTLDGPFE---------PETVPYDASLRGNAVDIPDTDPLVRRRVTG 73 (552)
Q Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~---------p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 73 (552)
+|-|+==+..||+||+.+++||.....+ +..-+++.-++. |+.+..|.. -.. ++
T Consensus 3 K~lns~W~irIiaff~A~~Lfl~vn~~n~~N~~~t~~~~~~t~~~tltdvpvdvlYD~~----~y~-----------is- 66 (403)
T COG4856 3 KFLNSPWLIRIIAFFFAILLFLYVNNNNFNNPISTIKPTSETYTLTLTDVPVDVLYDSD----KYF-----------IS- 66 (403)
T ss_pred chhcCcHhHHHHHHHHHHHhheeecccccCCcccccccccccccceeeeceeEEEEccc----ccc-----------cc-
Confidence 4555533445777888888888776552 222233332332 444443322 111 12
Q ss_pred CCCceeEEeecCCCCeEEEEE
Q 008826 74 FEPEQLSVSLSFNHDSIWITW 94 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W 94 (552)
.+|++|.+++++ |+++.+.-
T Consensus 67 g~~etV~Vtl~G-~ns~~~~~ 86 (403)
T COG4856 67 GQPETVTVTLKG-PNSIVLKS 86 (403)
T ss_pred CCceEEEEEEeC-Ccceeeee
Confidence 479999999998 55544443
No 144
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=35.17 E-value=67 Score=32.27 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=22.3
Q ss_pred EEEEeCCCCCCChHHHHHHH--HhCCCCE-EEEcCCccc
Q 008826 201 IAIVGDLGLTYNTTCTINHM--SSNEPDL-VLLVGDVTY 236 (552)
Q Consensus 201 favigD~~~~~~~~~~l~~l--~~~~pDf-vl~~GDl~Y 236 (552)
+.+.||.|..+ ...++-+ -...||. .++.||.+.
T Consensus 62 vtvcGDvHGqf--~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 62 VTVCGDVHGQF--HDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred eEEecCcchhH--HHHHHHHHccCCCCCcceeeeeeecc
Confidence 67899999753 3334333 2345663 678999995
No 145
>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R ....
Probab=30.87 E-value=2.2e+02 Score=24.05 Aligned_cols=75 Identities=19% Similarity=0.268 Sum_probs=41.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|+.|.+..-+ -...+.|.-+... |....=.|+|...+...++.+.+=... ..
T Consensus 24 ~P~nv~~~s~n--f~~iL~W~~~~~~---------~~~~~ytVq~~~~~~~~W~~v~~C~~i----------------~~ 76 (107)
T PF01108_consen 24 APQNVTVDSVN--FKHILRWDPGPGS---------PPNVTYTVQYKKYGSSSWKDVPGCQNI----------------TE 76 (107)
T ss_dssp SCEEEEEEEET--TEEEEEEEESTTS---------SSTEEEEEEEEESSTSCEEEECCEEEE----------------SS
T ss_pred CCCeeEEEEEC--CceEEEeCCCCCC---------CCCeEEEEEEEecCCcceeeccceecc----------------cc
Confidence 47877765433 3578889874321 222456788884444444433111100 11
Q ss_pred EEEEeCCCC--CCCEEEEEEecCC
Q 008826 155 HHVRLTGLE--PNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~--P~T~Y~Y~v~~~~ 176 (552)
++..|+... +.-.|+.||.+..
T Consensus 77 ~~Cdlt~~~~~~~~~Y~~rV~A~~ 100 (107)
T PF01108_consen 77 TSCDLTDETSDPSESYYARVRAEV 100 (107)
T ss_dssp SEEECTTCCTTTTSEEEEEEEEEE
T ss_pred cceeCcchhhcCcCCEEEEEEEEe
Confidence 455666543 7888999997654
No 146
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=30.52 E-value=60 Score=28.15 Aligned_cols=23 Identities=35% Similarity=0.648 Sum_probs=20.3
Q ss_pred CeEEEEEeCCCCCCCEEEEEEec
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGD 174 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~ 174 (552)
+-++++.|.++.+|+.|-|||..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 35788999999999999999974
No 147
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=29.07 E-value=68 Score=27.07 Aligned_cols=23 Identities=22% Similarity=0.462 Sum_probs=20.1
Q ss_pred CeEEEEEeCCCCCCCEEEEEEec
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGD 174 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~ 174 (552)
+-+.++.+.++.+|+.|.|+|..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 35789999999999999999975
No 148
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=26.67 E-value=74 Score=26.60 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=20.6
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecC
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDP 175 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~ 175 (552)
+-++++.+.++.+|+.|.|+|...
T Consensus 46 ~gvw~~~v~~~~~g~~Y~y~i~~~ 69 (100)
T cd02860 46 NGVWSVTLDGDLEGYYYLYEVKVY 69 (100)
T ss_pred CCEEEEEeCCccCCcEEEEEEEEe
Confidence 357889999999999999999754
No 149
>PRK10301 hypothetical protein; Provisional
Probab=26.36 E-value=4.5e+02 Score=23.17 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=23.8
Q ss_pred eEEEEEeC-CCCCCC-EEEEEEecCCCCCCCceEEEE
Q 008826 153 IIHHVRLT-GLEPNN-KYYYQCGDPSIPAMSDVYYFR 187 (552)
Q Consensus 153 ~~h~v~l~-gL~P~T-~Y~Y~v~~~~~~~~S~~~~F~ 187 (552)
....+.|. .|.||+ +..||+-+.++-..+..|+|+
T Consensus 86 ~~~~v~l~~~L~~G~YtV~Wrvvs~DGH~~~G~~~F~ 122 (124)
T PRK10301 86 KQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFS 122 (124)
T ss_pred cEEEEECCCCCCCccEEEEEEEEecCCCccCCeEEEE
Confidence 34567775 688885 247888777655667777775
No 150
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=26.33 E-value=77 Score=25.66 Aligned_cols=21 Identities=19% Similarity=0.387 Sum_probs=18.3
Q ss_pred eEEEEEeCCCCCCCEEEEEEec
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGD 174 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~ 174 (552)
-++++.+.++ +|+.|.|++..
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~~ 60 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLDD 60 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEECC
Confidence 4678899999 99999999973
No 151
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=25.87 E-value=65 Score=26.94 Aligned_cols=20 Identities=25% Similarity=0.468 Sum_probs=15.5
Q ss_pred EEEEeCCCCCCCEEEEEEec
Q 008826 155 HHVRLTGLEPNNKYYYQCGD 174 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~ 174 (552)
-.+.|.+|+|+|.|..+|..
T Consensus 67 ~~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 67 SSVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEEES--TTSEEEEEEEE
T ss_pred CEEEEeCCCCCCCEEEEEEE
Confidence 35689999999999999986
No 152
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=25.33 E-value=3.1e+02 Score=33.19 Aligned_cols=76 Identities=14% Similarity=0.208 Sum_probs=45.8
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEec----CCCCCceEEEEEEEEeeeecccCCcccc
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGT----SRTNLNHEATGHSLVYDQLYPFEGLQNY 149 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~----~~~~~~~~a~g~~~~y~~~~p~~g~~~~ 149 (552)
..|+++++.=- ..+++.++|.-+... .+++..|-. .....|+.+. + .|..
T Consensus 616 gpP~~v~~~~i-~~t~~~lsW~~g~dn------------~SpI~~Y~iq~rt~~~~~W~~v~-~-------vp~~----- 669 (1051)
T KOG3513|consen 616 GPPPDVHVDDI-SDTTARLSWSPGSDN------------NSPIEKYTIQFRTPFPGKWKAVT-T-------VPGN----- 669 (1051)
T ss_pred CCCCceeEeee-ccceEEEEeecCCCC------------CCCceEEeEEecCCCCCcceEee-E-------CCCc-----
Confidence 36777776422 368899999886532 234555544 3222333332 1 1211
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCC
Q 008826 150 TSGIIHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..+- +.+++.+|.|-..|.+||.+-+
T Consensus 670 ~~~~-~sa~vv~L~Pwv~YeFRV~AvN 695 (1051)
T KOG3513|consen 670 ITGD-ESATVVNLSPWVEYEFRVVAVN 695 (1051)
T ss_pred ccCc-cceeEEccCCCcceEEEEEEEc
Confidence 1234 6688899999999999997554
No 153
>COG4037 Predicted membrane protein [Function unknown]
Probab=25.21 E-value=1.2e+02 Score=27.10 Aligned_cols=69 Identities=25% Similarity=0.359 Sum_probs=38.5
Q ss_pred ccCcchhhHHHHHhhhHhhhhcCCCCCCccCCCCC-----ccccccccCCCCCCCCCCCCCccccc-CCCCCCceeEE
Q 008826 10 RMGGIFLFFIFLLSPLDIRATNANIPSTLDGPFEP-----ETVPYDASLRGNAVDIPDTDPLVRRR-VTGFEPEQLSV 81 (552)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~P~qi~l 81 (552)
||-+++++++.|+.+|..++-..--|..|.....| .++|+-|.=|| +.|..+|-+.+. .+.++|+.-.+
T Consensus 19 ~~prvf~~~Lal~~l~Gll~ph~lnp~QLYPrP~Pq~Q~~~kdPLAPYDRG---GvPLe~Pg~~ksQYPQfEpnlGki 93 (163)
T COG4037 19 SMPRVFCLLLALLALLGLLCPHSLNPEQLYPRPAPQVQMKAKDPLAPYDRG---GVPLESPGVTKSQYPQFEPNLGKI 93 (163)
T ss_pred hhHHHHHHHHHHHHHHHhhCccccCHHHcCCCCCchhhhccCCCCCCccCC---CCccCCccchhhhCCcccccccee
Confidence 56667777777776666665443446666655555 24566555333 356666654433 44455554433
No 154
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=24.59 E-value=2.2e+02 Score=28.65 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=50.9
Q ss_pred ceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 198 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
..+|++.+|.+.- .....++.+++.+|+++++.|=.+|--++. -| +...+.-.+.|+.+
T Consensus 176 ~~~i~faSDvqGp-~~~~~l~~i~e~~P~v~ii~GPpty~lg~r-~~-------------------~~~~E~~irNl~~i 234 (304)
T COG2248 176 KSSIVFASDVQGP-INDEALEFILEKRPDVLIIGGPPTYLLGYR-VG-------------------PKSLEKGIRNLERI 234 (304)
T ss_pred CeEEEEcccccCC-CccHHHHHHHhcCCCEEEecCCchhHhhhh-cC-------------------hHHHHHHHHHHHHH
Confidence 4689999999865 345678889999999999999999643221 01 11222334556666
Q ss_pred hhcCCeEEecCCchhc
Q 008826 278 VSKVPIMVVEGNHEIE 293 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~ 293 (552)
....+--.|..-|=..
T Consensus 235 i~~~~~~lViDHHllR 250 (304)
T COG2248 235 IEETNATLVIDHHLLR 250 (304)
T ss_pred HHhCcceEEEeehhhc
Confidence 6667766777777664
No 155
>COG3065 Slp Starvation-inducible outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]
Probab=22.75 E-value=54 Score=30.94 Aligned_cols=30 Identities=23% Similarity=0.103 Sum_probs=19.7
Q ss_pred ccC-cchhhHHHHHhhhHhhhhcCCCCCCccCCC
Q 008826 10 RMG-GIFLFFIFLLSPLDIRATNANIPSTLDGPF 42 (552)
Q Consensus 10 ~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 42 (552)
+|+ -+.++++.|.+.|+.|+ .||..|.|++
T Consensus 4 ~m~~~~~~l~~~laflLsgC~---tiPk~l~g~~ 34 (191)
T COG3065 4 QMNMKKGALIGTLAFLLSGCV---TIPKALKGES 34 (191)
T ss_pred HhhhHHHHHHHHHHHHHhhcc---cCChhhcCCC
Confidence 445 44455555555566666 5999999998
No 156
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=21.79 E-value=1.9e+02 Score=28.42 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=20.5
Q ss_pred EEEEeCCCCCCChHHHHHHHH--hCCCC-EEEEcCCccc
Q 008826 201 IAIVGDLGLTYNTTCTINHMS--SNEPD-LVLLVGDVTY 236 (552)
Q Consensus 201 favigD~~~~~~~~~~l~~l~--~~~pD-fvl~~GDl~Y 236 (552)
+-+.||+|... ...++-.. -.-|| --|+.||+++
T Consensus 48 VTvCGDIHGQF--yDL~eLFrtgG~vP~tnYiFmGDfVD 84 (306)
T KOG0373|consen 48 VTVCGDIHGQF--YDLLELFRTGGQVPDTNYIFMGDFVD 84 (306)
T ss_pred eeEeeccchhH--HHHHHHHHhcCCCCCcceEEeccccc
Confidence 56899999652 33333222 12355 3578999995
No 157
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=21.08 E-value=81 Score=30.69 Aligned_cols=29 Identities=21% Similarity=0.261 Sum_probs=19.1
Q ss_pred cCCcEEEEccccCceeeeeccccccCCCCcEEEEECC
Q 008826 399 YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435 (552)
Q Consensus 399 ~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~ 435 (552)
.++++|++||+|.-.... .++.+.|.+|+
T Consensus 178 ~~~~~vv~GHTh~~~~~~--------~~~~i~IDtGs 206 (218)
T PRK09968 178 NGADYFIFGHMMFDNIQT--------FANQIYIDTGS 206 (218)
T ss_pred CCCCEEEECCCCcCccee--------ECCEEEEECCC
Confidence 467899999999643221 13466776665
No 158
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=20.94 E-value=96 Score=31.95 Aligned_cols=20 Identities=20% Similarity=0.461 Sum_probs=17.6
Q ss_pred EEeCCCCCCCEEEEEEecCC
Q 008826 157 VRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 157 v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
.+|.||+||+.|-..|....
T Consensus 262 etI~~L~PG~~Yl~dV~~~~ 281 (300)
T PF10179_consen 262 ETIKGLKPGTTYLFDVYVNG 281 (300)
T ss_pred eecccCCCCcEEEEEEEEec
Confidence 47999999999999998765
No 159
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.93 E-value=2e+02 Score=31.31 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=27.2
Q ss_pred ceEEEEEeCCCCCCChHHHHHHHHh----C-CCCEEEEcCCccc
Q 008826 198 PKRIAIVGDLGLTYNTTCTINHMSS----N-EPDLVLLVGDVTY 236 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~l~~l~~----~-~pDfvl~~GDl~Y 236 (552)
+.||+++||... +....++++.+ . ..|+++++|++.-
T Consensus 5 ~~kILv~Gd~~G--r~~eli~rI~~v~Kk~GpFd~liCvGnfF~ 46 (528)
T KOG2476|consen 5 DAKILVCGDVEG--RFDELIKRIQKVNKKSGPFDLLICVGNFFG 46 (528)
T ss_pred CceEEEEcCccc--cHHHHHHHHHHHhhcCCCceEEEEecccCC
Confidence 469999999864 44556665542 2 4799999999983
No 160
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=20.08 E-value=76 Score=22.76 Aligned_cols=19 Identities=37% Similarity=0.389 Sum_probs=10.9
Q ss_pred cCcchhhHHHHHhhhHhhh
Q 008826 11 MGGIFLFFIFLLSPLDIRA 29 (552)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~ 29 (552)
|..|+..+||++..|.+++
T Consensus 1 MkKi~~~~i~~~~~~L~aC 19 (46)
T PF02402_consen 1 MKKIIFIGIFLLTMLLAAC 19 (46)
T ss_pred CcEEEEeHHHHHHHHHHHh
Confidence 4456666666666444444
Done!