Query 008828
Match_columns 552
No_of_seqs 600 out of 5011
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 12:40:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008828.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008828hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 3.8E-57 1.3E-61 446.4 16.8 253 231-503 27-303 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 8.7E-57 3E-61 442.0 14.2 253 230-503 13-286 (299)
3 4aoj_A High affinity nerve gro 100.0 4.3E-56 1.5E-60 443.1 18.3 254 230-504 41-317 (329)
4 3omv_A RAF proto-oncogene seri 100.0 1.3E-55 4.5E-60 433.6 20.0 257 229-503 35-297 (307)
5 4ase_A Vascular endothelial gr 100.0 4.4E-55 1.5E-59 439.2 15.1 265 220-503 54-344 (353)
6 4b9d_A Serine/threonine-protei 100.0 5.6E-55 1.9E-59 435.1 14.7 250 230-500 24-277 (350)
7 4g3f_A NF-kappa-beta-inducing 100.0 2.6E-54 9E-59 428.4 18.6 250 230-503 58-313 (336)
8 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.8E-55 2.3E-59 427.4 14.0 248 230-498 32-283 (311)
9 4fih_A Serine/threonine-protei 100.0 8E-54 2.7E-58 426.1 21.5 250 230-500 74-324 (346)
10 3fpq_A Serine/threonine-protei 100.0 3.2E-54 1.1E-58 420.7 17.6 248 233-500 29-283 (290)
11 3hyh_A Carbon catabolite-derep 100.0 1.1E-53 3.9E-58 413.1 17.4 247 230-500 13-263 (275)
12 3hmm_A TGF-beta receptor type- 100.0 1.4E-53 4.9E-58 421.8 16.3 266 230-503 3-294 (303)
13 4fie_A Serine/threonine-protei 100.0 1.5E-52 5.3E-57 427.0 22.6 250 230-500 151-401 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 6.6E-54 2.2E-58 420.5 10.2 249 230-500 24-282 (304)
15 3uim_A Brassinosteroid insensi 100.0 7.8E-52 2.7E-56 415.6 21.3 311 208-518 8-323 (326)
16 4g31_A Eukaryotic translation 100.0 6.3E-52 2.1E-56 408.1 13.8 249 230-500 5-280 (299)
17 4b99_A Mitogen-activated prote 100.0 1.3E-49 4.4E-54 406.4 15.5 263 230-500 54-345 (398)
18 4f9c_A Cell division cycle 7-r 100.0 1.4E-48 4.9E-53 394.5 18.8 199 228-435 19-251 (361)
19 2qkw_B Protein kinase; three-h 100.0 3.5E-47 1.2E-51 380.9 23.3 279 220-503 29-312 (321)
20 3v5w_A G-protein coupled recep 100.0 2.1E-47 7E-52 406.3 18.5 251 230-501 189-451 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 2.8E-47 9.7E-52 407.9 18.1 251 230-500 157-411 (573)
22 3zgw_A Maternal embryonic leuc 100.0 5.1E-46 1.7E-50 375.1 16.0 251 229-500 9-261 (347)
23 2nru_A Interleukin-1 receptor- 100.0 5.8E-44 2E-48 355.1 29.6 280 216-504 11-304 (307)
24 2psq_A Fibroblast growth facto 100.0 2E-45 6.7E-50 375.2 18.9 254 230-503 81-361 (370)
25 3p86_A Serine/threonine-protei 100.0 3.2E-45 1.1E-49 364.4 18.2 257 227-504 34-296 (309)
26 3fxz_A Serine/threonine-protei 100.0 1.5E-44 5E-49 357.7 22.6 251 229-500 19-270 (297)
27 3kul_A Ephrin type-A receptor 100.0 3.1E-45 1E-49 367.3 17.7 255 230-504 49-311 (325)
28 4euu_A Serine/threonine-protei 100.0 2.6E-44 8.8E-49 359.8 23.7 269 230-506 9-309 (319)
29 3s95_A LIMK-1, LIM domain kina 100.0 4.9E-45 1.7E-49 363.5 18.2 256 230-504 10-280 (310)
30 3fe3_A MAP/microtubule affinit 100.0 2.9E-45 9.9E-50 367.4 16.3 249 229-500 14-265 (328)
31 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.8E-45 3E-49 353.7 18.8 255 229-505 7-263 (268)
32 2qol_A Ephrin receptor; recept 100.0 4.5E-45 1.6E-49 372.8 16.8 255 230-504 45-307 (373)
33 3cbl_A C-FES, proto-oncogene t 100.0 1.9E-45 6.4E-50 376.5 13.9 256 228-503 112-371 (377)
34 3vhe_A Vascular endothelial gr 100.0 1.9E-45 6.6E-50 374.1 13.5 265 220-503 12-352 (359)
35 3tki_A Serine/threonine-protei 100.0 6.7E-45 2.3E-49 364.4 17.1 253 230-500 7-262 (323)
36 4aw2_A Serine/threonine-protei 100.0 3E-45 1E-49 380.1 14.8 265 222-502 66-341 (437)
37 4hcu_A Tyrosine-protein kinase 100.0 6.3E-45 2.1E-49 355.0 16.0 252 230-503 10-263 (269)
38 2yab_A Death-associated protei 100.0 2.9E-44 9.8E-49 364.5 21.0 254 229-501 11-274 (361)
39 4eqm_A Protein kinase; transfe 100.0 1.4E-44 4.8E-49 357.3 17.9 260 230-505 11-274 (294)
40 1o6l_A RAC-beta serine/threoni 100.0 1.6E-44 5.6E-49 363.0 18.2 251 230-502 5-263 (337)
41 2c30_A Serine/threonine-protei 100.0 2.2E-43 7.5E-48 353.2 25.6 262 218-500 23-295 (321)
42 3soc_A Activin receptor type-2 100.0 8E-45 2.7E-49 363.9 14.5 266 229-503 23-315 (322)
43 3gen_A Tyrosine-protein kinase 100.0 1.4E-44 4.8E-49 355.2 15.6 253 229-503 23-277 (283)
44 2ivs_A Proto-oncogene tyrosine 100.0 2.5E-44 8.7E-49 358.8 17.3 257 228-504 21-309 (314)
45 3tt0_A Basic fibroblast growth 100.0 2.7E-44 9.2E-49 368.7 17.9 256 229-504 68-350 (382)
46 3poz_A Epidermal growth factor 100.0 2.6E-44 8.7E-49 361.0 16.7 254 230-504 15-276 (327)
47 3niz_A Rhodanese family protei 100.0 3.2E-44 1.1E-48 357.7 17.2 263 229-500 20-301 (311)
48 1rjb_A FL cytokine receptor; k 100.0 4E-44 1.4E-48 362.3 18.1 259 227-504 42-332 (344)
49 1mp8_A Focal adhesion kinase 1 100.0 2.5E-44 8.6E-49 353.1 16.0 255 229-504 14-274 (281)
50 1qcf_A Haematopoetic cell kina 100.0 1.4E-44 4.8E-49 379.1 15.0 258 225-505 183-443 (454)
51 2y0a_A Death-associated protei 100.0 6.1E-44 2.1E-48 358.0 18.7 254 230-502 11-274 (326)
52 4dc2_A Protein kinase C IOTA t 100.0 7.7E-44 2.6E-48 364.7 19.5 252 229-494 51-307 (396)
53 1luf_A Muscle-specific tyrosin 100.0 2.4E-44 8.3E-49 363.6 15.6 258 228-505 45-334 (343)
54 1opk_A P150, C-ABL, proto-onco 100.0 3.7E-44 1.3E-48 379.5 17.6 258 228-507 218-479 (495)
55 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.7E-44 5.8E-49 365.3 14.1 252 228-501 21-282 (353)
56 1tki_A Titin; serine kinase, m 100.0 7.5E-44 2.6E-48 356.4 18.7 252 229-501 4-259 (321)
57 1t46_A HOMO sapiens V-KIT hard 100.0 4.8E-44 1.6E-48 356.6 17.2 256 229-503 22-304 (313)
58 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-44 4.3E-49 368.9 13.1 255 230-504 71-343 (367)
59 3q4u_A Activin receptor type-1 100.0 1.3E-43 4.3E-48 351.5 19.8 259 229-503 7-299 (301)
60 3v8s_A RHO-associated protein 100.0 2.8E-44 9.7E-49 369.9 15.1 266 223-506 62-336 (410)
61 1fot_A TPK1 delta, CAMP-depend 100.0 9.6E-44 3.3E-48 354.8 18.5 247 230-501 6-260 (318)
62 2pmi_A Negative RE, cyclin-dep 100.0 7E-44 2.4E-48 356.2 17.3 263 229-500 4-294 (317)
63 3o0g_A Cell division protein k 100.0 1E-43 3.6E-48 350.7 18.3 264 230-500 2-283 (292)
64 3qd2_B Eukaryotic translation 100.0 1.1E-43 3.7E-48 356.9 18.2 249 230-500 6-326 (332)
65 2i1m_A Macrophage colony-stimu 100.0 2.6E-44 8.7E-49 362.0 13.5 261 225-504 41-324 (333)
66 1ob3_A PFPK5, cell division co 100.0 5.8E-44 2E-48 351.9 15.7 263 230-500 2-281 (288)
67 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.4E-44 1.5E-48 359.5 15.0 247 230-500 9-259 (336)
68 2bdw_A Hypothetical protein K1 100.0 1.3E-43 4.6E-48 360.4 18.6 253 229-500 28-285 (362)
69 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-43 4.7E-48 350.9 18.2 250 230-500 13-293 (298)
70 4fr4_A YANK1, serine/threonine 100.0 8.8E-44 3E-48 363.1 17.2 250 230-499 15-271 (384)
71 3lb7_A RAF proto-oncogene seri 100.0 4.1E-43 1.4E-47 348.9 21.3 258 229-504 35-298 (307)
72 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.6E-44 2.2E-48 373.6 16.3 256 227-505 181-439 (452)
73 3soa_A Calcium/calmodulin-depe 100.0 2E-43 6.9E-48 367.6 19.6 255 228-500 9-268 (444)
74 3dtc_A Mitogen-activated prote 100.0 1.7E-43 5.8E-48 345.2 17.7 253 230-503 7-270 (271)
75 1k9a_A Carboxyl-terminal SRC k 100.0 1.8E-43 6.2E-48 370.1 19.0 248 228-503 191-442 (450)
76 1qpc_A LCK kinase; alpha beta 100.0 7E-44 2.4E-48 349.5 14.9 253 228-503 11-266 (279)
77 3kex_A Receptor tyrosine-prote 100.0 5.4E-44 1.8E-48 358.4 14.1 255 230-505 13-275 (325)
78 3a8x_A Protein kinase C IOTA t 100.0 2.7E-43 9.3E-48 355.6 19.3 251 230-494 9-264 (345)
79 2pvf_A Fibroblast growth facto 100.0 1.7E-43 5.9E-48 356.1 17.8 256 229-504 34-316 (334)
80 3ugc_A Tyrosine-protein kinase 100.0 1.1E-43 3.8E-48 351.0 16.1 262 230-503 10-288 (295)
81 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.7E-43 5.8E-48 357.6 17.7 248 230-502 41-296 (350)
82 3t9t_A Tyrosine-protein kinase 100.0 9.3E-44 3.2E-48 346.1 15.1 252 230-503 8-261 (267)
83 2vd5_A DMPK protein; serine/th 100.0 3.4E-44 1.1E-48 369.6 12.6 265 221-502 52-330 (412)
84 3lxp_A Non-receptor tyrosine-p 100.0 9E-44 3.1E-48 355.7 15.2 266 232-503 33-307 (318)
85 3dbq_A Dual specificity protei 100.0 1.1E-43 3.7E-48 358.9 15.8 253 229-501 8-275 (343)
86 1xjd_A Protein kinase C, theta 100.0 4.7E-44 1.6E-48 360.7 13.0 251 227-499 14-269 (345)
87 3cc6_A Protein tyrosine kinase 100.0 1.4E-43 4.7E-48 347.8 16.0 255 229-504 11-271 (281)
88 2xir_A Vascular endothelial gr 100.0 9.3E-44 3.2E-48 355.0 15.0 265 221-504 18-308 (316)
89 3uc3_A Serine/threonine-protei 100.0 1.3E-43 4.6E-48 360.4 16.3 253 229-500 19-275 (361)
90 3kn6_A Ribosomal protein S6 ki 100.0 2.8E-43 9.7E-48 352.9 18.2 251 235-500 16-271 (325)
91 3kfa_A Tyrosine-protein kinase 100.0 5.9E-44 2E-48 351.6 13.0 256 227-504 10-269 (288)
92 3ork_A Serine/threonine protei 100.0 3.1E-43 1.1E-47 350.6 18.3 253 230-499 12-273 (311)
93 3p1a_A MYT1 kinase, membrane-a 100.0 2.5E-43 8.5E-48 351.3 17.5 245 230-500 57-305 (311)
94 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-43 7.9E-48 357.1 17.5 251 229-500 52-306 (349)
95 4e5w_A Tyrosine-protein kinase 100.0 6.7E-44 2.3E-48 353.7 13.4 261 230-503 21-299 (302)
96 3kmu_A ILK, integrin-linked ki 100.0 2E-43 6.7E-48 344.4 16.2 249 230-504 10-268 (271)
97 3a62_A Ribosomal protein S6 ki 100.0 2.2E-43 7.4E-48 354.2 16.9 252 229-502 16-279 (327)
98 4eut_A Serine/threonine-protei 100.0 4.2E-43 1.4E-47 361.5 18.9 267 230-504 9-307 (396)
99 2i0e_A Protein kinase C-beta I 100.0 2.4E-43 8.1E-48 356.7 16.5 251 228-500 18-277 (353)
100 1p4o_A Insulin-like growth fac 100.0 9.3E-44 3.2E-48 356.1 13.4 267 220-506 15-299 (322)
101 3qup_A Tyrosine-protein kinase 100.0 2.4E-43 8.1E-48 353.4 16.3 258 227-504 20-296 (323)
102 2zmd_A Dual specificity protei 100.0 2.8E-43 9.4E-48 361.8 16.8 252 230-501 56-322 (390)
103 1kob_A Twitchin; kinase, intra 100.0 7E-43 2.4E-47 357.5 19.4 251 230-500 51-305 (387)
104 2izr_A Casein kinase I isoform 100.0 1.3E-42 4.4E-47 349.1 20.8 256 230-503 9-278 (330)
105 1u59_A Tyrosine-protein kinase 100.0 5.6E-43 1.9E-47 344.6 17.7 254 230-504 9-270 (287)
106 3lzb_A Epidermal growth factor 100.0 2.8E-43 9.4E-48 353.4 15.7 254 230-504 15-276 (327)
107 4f0f_A Serine/threonine-protei 100.0 9.3E-43 3.2E-47 343.0 19.1 251 230-503 19-286 (287)
108 3c0i_A Peripheral plasma membr 100.0 7E-43 2.4E-47 353.9 18.7 252 230-500 24-287 (351)
109 2yex_A Serine/threonine-protei 100.0 6E-43 2.1E-47 342.2 17.6 253 230-500 7-262 (276)
110 1csn_A Casein kinase-1; phosph 100.0 2.8E-42 9.5E-47 341.4 22.5 259 229-504 9-281 (298)
111 1xbb_A Tyrosine-protein kinase 100.0 2.5E-43 8.5E-48 347.9 14.8 255 229-504 15-277 (291)
112 4ejn_A RAC-alpha serine/threon 100.0 2.4E-43 8.3E-48 369.1 15.6 253 229-503 147-408 (446)
113 2eue_A Carbon catabolite derep 100.0 4.5E-43 1.5E-47 343.1 16.5 247 230-500 13-263 (275)
114 1mqb_A Ephrin type-A receptor 100.0 6E-43 2.1E-47 351.9 17.6 255 230-504 44-307 (333)
115 2y94_A 5'-AMP-activated protei 100.0 6.2E-43 2.1E-47 366.3 18.3 248 230-500 16-267 (476)
116 4agu_A Cyclin-dependent kinase 100.0 7.2E-43 2.4E-47 347.9 17.7 267 230-500 3-285 (311)
117 3kk8_A Calcium/calmodulin depe 100.0 1.2E-42 4.2E-47 341.5 18.8 253 229-500 5-262 (284)
118 3pls_A Macrophage-stimulating 100.0 9E-43 3.1E-47 344.9 17.9 254 231-503 22-284 (298)
119 2a2a_A Death-associated protei 100.0 4.1E-42 1.4E-46 344.1 22.8 255 229-502 11-275 (321)
120 2r5t_A Serine/threonine-protei 100.0 2.7E-43 9.1E-48 358.8 14.4 253 230-504 38-294 (373)
121 3op5_A Serine/threonine-protei 100.0 6.5E-43 2.2E-47 356.2 17.3 264 229-503 34-326 (364)
122 3gni_B Strad alpha; kinase fol 100.0 1.2E-42 4.1E-47 357.5 19.3 269 229-500 24-334 (389)
123 3lxl_A Tyrosine-protein kinase 100.0 2.2E-43 7.4E-48 354.3 13.4 272 230-507 23-304 (327)
124 3is5_A Calcium-dependent prote 100.0 2.6E-42 8.8E-47 339.5 20.4 250 230-500 22-279 (285)
125 2h34_A Serine/threonine-protei 100.0 3.4E-42 1.2E-46 342.8 21.4 260 229-506 33-296 (309)
126 2ozo_A Tyrosine-protein kinase 100.0 7.7E-43 2.6E-47 378.0 18.2 246 237-503 343-595 (613)
127 3fdn_A Serine/threonine-protei 100.0 5.9E-43 2E-47 343.0 15.6 248 229-500 8-258 (279)
128 3hko_A Calcium/calmodulin-depe 100.0 7.3E-43 2.5E-47 353.1 16.6 259 225-500 21-331 (345)
129 1vzo_A Ribosomal protein S6 ki 100.0 2.5E-43 8.7E-48 357.7 13.3 258 230-504 54-326 (355)
130 3c1x_A Hepatocyte growth facto 100.0 4.8E-43 1.6E-47 357.5 15.3 253 231-503 90-352 (373)
131 2acx_A G protein-coupled recep 100.0 8.5E-43 2.9E-47 370.2 17.8 254 229-501 183-446 (576)
132 3dls_A PAS domain-containing s 100.0 9.5E-43 3.2E-47 350.5 17.2 244 229-501 23-276 (335)
133 2h8h_A Proto-oncogene tyrosine 100.0 2.5E-43 8.5E-48 376.5 13.5 258 225-505 262-522 (535)
134 3g33_A Cell division protein k 100.0 3.8E-43 1.3E-47 349.4 13.9 264 228-500 7-297 (308)
135 3f66_A Hepatocyte growth facto 100.0 1.3E-42 4.4E-47 343.9 17.4 255 230-503 25-288 (298)
136 2v62_A Serine/threonine-protei 100.0 9.7E-43 3.3E-47 352.2 16.6 266 230-506 37-328 (345)
137 2eva_A TAK1 kinase - TAB1 chim 100.0 1.3E-42 4.6E-47 345.3 17.2 250 230-504 8-261 (307)
138 3gxj_A TGF-beta receptor type- 100.0 6.8E-44 2.3E-48 353.7 7.6 258 230-507 3-298 (303)
139 1nxk_A MAP kinase-activated pr 100.0 4.4E-42 1.5E-46 353.9 21.3 251 230-501 61-323 (400)
140 1fvr_A Tyrosine-protein kinase 100.0 8.9E-43 3E-47 349.8 15.7 252 230-503 25-297 (327)
141 3mdy_A Bone morphogenetic prot 100.0 1.1E-41 3.9E-46 343.0 23.8 266 225-503 32-328 (337)
142 3og7_A AKAP9-BRAF fusion prote 100.0 2.4E-42 8.2E-47 340.5 18.3 260 228-505 22-287 (289)
143 3llt_A Serine/threonine kinase 100.0 1.3E-42 4.4E-47 353.5 16.8 274 217-500 22-356 (360)
144 3f3z_A Calcium/calmodulin-depe 100.0 2.9E-42 9.8E-47 337.7 18.5 246 229-499 8-261 (277)
145 3cok_A Serine/threonine-protei 100.0 1.9E-42 6.4E-47 339.2 17.2 249 230-500 11-263 (278)
146 3bhy_A Death-associated protei 100.0 2.1E-42 7.3E-47 339.6 17.3 252 230-500 5-266 (283)
147 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-42 4.1E-47 350.5 15.8 252 229-500 21-278 (342)
148 3oz6_A Mitogen-activated prote 100.0 7.6E-43 2.6E-47 358.8 14.3 267 228-500 7-329 (388)
149 3a7i_A MST3 kinase, serine/thr 100.0 3.3E-42 1.1E-46 341.8 18.2 250 230-501 22-272 (303)
150 1u5q_A Serine/threonine protei 100.0 1.4E-42 4.8E-47 350.9 15.8 247 230-501 54-307 (348)
151 3uzp_A CKI-delta, CKID, casein 100.0 2.7E-41 9.2E-46 333.9 24.5 258 229-503 8-277 (296)
152 4hgt_A Casein kinase I isoform 100.0 2.3E-41 7.7E-46 334.4 23.9 260 228-504 7-278 (296)
153 2x4f_A Myosin light chain kina 100.0 2.9E-42 9.9E-47 351.9 17.8 246 235-500 94-343 (373)
154 4fvq_A Tyrosine-protein kinase 100.0 6.4E-43 2.2E-47 344.4 12.4 252 230-508 8-277 (289)
155 3i6u_A CDS1, serine/threonine- 100.0 3E-42 1E-46 357.4 18.0 256 227-501 132-401 (419)
156 4fl3_A Tyrosine-protein kinase 100.0 2.3E-42 7.9E-47 375.2 17.6 247 236-503 375-628 (635)
157 3brb_A Proto-oncogene tyrosine 100.0 2.9E-42 1E-46 343.8 16.9 257 227-503 31-305 (313)
158 2yfx_A Tyrosine-protein kinase 100.0 1.8E-42 6E-47 347.7 15.4 255 229-503 29-301 (327)
159 3ttj_A Mitogen-activated prote 100.0 3.8E-42 1.3E-46 360.8 18.5 264 229-500 61-356 (464)
160 3lm5_A Serine/threonine-protei 100.0 5.5E-42 1.9E-46 344.0 18.9 261 222-501 20-289 (327)
161 1x8b_A WEE1HU, WEE1-like prote 100.0 2.9E-42 9.8E-47 339.2 16.5 244 229-500 10-280 (289)
162 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.9E-43 2.7E-47 350.5 12.7 264 229-500 33-319 (329)
163 3mtl_A Cell division protein k 100.0 3.2E-43 1.1E-47 352.5 9.7 263 230-501 2-283 (324)
164 1b6c_B TGF-B superfamily recep 100.0 1.5E-41 5E-46 343.1 21.8 267 222-504 34-334 (342)
165 3eqc_A Dual specificity mitoge 100.0 5.8E-43 2E-47 356.1 11.4 266 230-500 33-325 (360)
166 2ac3_A MAP kinase-interacting 100.0 3.2E-42 1.1E-46 344.0 16.3 261 230-501 12-297 (316)
167 2vgo_A Serine/threonine-protei 100.0 4.4E-42 1.5E-46 337.7 16.9 247 230-500 14-263 (284)
168 1byg_A CSK, protein (C-termina 100.0 2.2E-42 7.6E-47 338.7 14.7 247 229-503 20-270 (278)
169 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.6E-41 5.4E-46 346.1 21.6 248 227-503 62-336 (365)
170 2y7j_A Phosphorylase B kinase 100.0 1.4E-41 4.6E-46 346.3 20.7 257 225-500 89-360 (365)
171 1t4h_A Serine/threonine-protei 100.0 6E-42 2.1E-46 337.7 17.5 248 231-500 27-283 (290)
172 2w5a_A Serine/threonine-protei 100.0 7.6E-43 2.6E-47 342.1 10.9 254 230-504 6-272 (279)
173 2buj_A Serine/threonine-protei 100.0 3.6E-42 1.2E-46 343.8 16.0 260 229-507 28-307 (317)
174 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.6E-42 1.9E-46 363.1 18.2 252 230-499 185-448 (543)
175 2rku_A Serine/threonine-protei 100.0 5.1E-42 1.7E-46 339.0 16.7 249 230-500 15-266 (294)
176 2a19_B Interferon-induced, dou 100.0 7E-42 2.4E-46 335.9 17.6 244 229-504 10-272 (284)
177 2wqm_A Serine/threonine-protei 100.0 7.3E-42 2.5E-46 340.5 17.9 257 230-504 32-295 (310)
178 3g2f_A Bone morphogenetic prot 100.0 3E-42 1E-46 347.3 15.1 266 229-504 12-316 (336)
179 3n9x_A Phosphotransferase; mal 100.0 2.5E-41 8.5E-46 352.1 22.5 200 229-432 25-253 (432)
180 3rp9_A Mitogen-activated prote 100.0 1.3E-41 4.6E-46 357.3 20.6 194 230-427 53-280 (458)
181 3byv_A Rhoptry kinase; malaria 100.0 7.5E-43 2.6E-47 357.4 10.5 241 229-500 72-360 (377)
182 4aaa_A Cyclin-dependent kinase 100.0 6.2E-42 2.1E-46 344.3 16.8 267 230-500 25-307 (331)
183 2owb_A Serine/threonine-protei 100.0 4.7E-42 1.6E-46 345.7 15.6 249 230-500 41-292 (335)
184 2jii_A Serine/threonine-protei 100.0 5.2E-42 1.8E-46 347.9 16.0 257 230-503 42-333 (352)
185 3nyv_A Calmodulin-domain prote 100.0 5.1E-42 1.7E-46 363.0 16.4 251 230-500 26-282 (484)
186 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-41 3.9E-46 361.8 18.8 252 229-500 35-302 (504)
187 2h6d_A 5'-AMP-activated protei 100.0 6.5E-42 2.2E-46 334.9 15.1 248 230-500 11-262 (276)
188 2vwi_A Serine/threonine-protei 100.0 1.9E-42 6.3E-47 343.4 11.3 261 227-500 12-288 (303)
189 3lij_A Calcium/calmodulin depe 100.0 1.1E-41 3.8E-46 361.0 17.9 251 230-500 37-292 (494)
190 3pg1_A Mitogen-activated prote 100.0 3.3E-42 1.1E-46 350.7 13.2 274 222-501 14-318 (362)
191 3pfq_A PKC-B, PKC-beta, protei 100.0 8.1E-42 2.8E-46 373.5 17.0 251 228-500 339-598 (674)
192 1cm8_A Phosphorylated MAP kina 100.0 8.4E-42 2.9E-46 347.9 16.0 262 230-501 25-309 (367)
193 2w1i_A JAK2; chromosomal rearr 100.0 1.5E-41 5.1E-46 340.8 17.5 265 230-503 41-319 (326)
194 3ll6_A Cyclin G-associated kin 100.0 2.4E-42 8.3E-47 347.8 11.7 251 229-504 27-306 (337)
195 3an0_A Dual specificity mitoge 100.0 7.4E-42 2.5E-46 345.1 15.2 251 229-499 50-310 (340)
196 3nsz_A CK II alpha, casein kin 100.0 2.9E-41 1E-45 339.2 19.3 257 230-500 36-320 (330)
197 3mwu_A Calmodulin-domain prote 100.0 3.4E-41 1.2E-45 356.7 20.7 251 230-500 22-277 (486)
198 1u46_A ACK-1, activated CDC42 100.0 3.9E-42 1.3E-46 339.0 12.6 255 230-504 18-282 (291)
199 1ua2_A CAK, cell division prot 100.0 1E-41 3.6E-46 344.8 15.9 266 228-502 8-294 (346)
200 3fme_A Dual specificity mitoge 100.0 8.6E-42 2.9E-46 336.5 14.9 251 229-499 6-266 (290)
201 2jam_A Calcium/calmodulin-depe 100.0 1E-41 3.5E-46 338.5 15.5 251 229-500 8-262 (304)
202 2ycf_A Serine/threonine-protei 100.0 2.7E-41 9.2E-46 338.3 18.6 253 229-500 9-275 (322)
203 2clq_A Mitogen-activated prote 100.0 4.2E-41 1.4E-45 332.4 19.7 250 231-500 23-279 (295)
204 3eb0_A Putative uncharacterize 100.0 6.4E-42 2.2E-46 351.2 14.3 261 226-500 3-322 (383)
205 2pml_X PFPK7, Ser/Thr protein 100.0 1.4E-41 4.7E-46 344.2 16.1 259 229-501 30-324 (348)
206 3mi9_A Cell division protein k 100.0 1.4E-41 4.9E-46 344.5 15.8 263 230-500 17-312 (351)
207 3qyz_A Mitogen-activated prote 100.0 1.3E-41 4.3E-46 346.7 15.4 268 229-501 26-315 (364)
208 3q60_A ROP5B; pseudokinase, tr 100.0 8.5E-42 2.9E-46 348.8 14.1 254 229-499 61-352 (371)
209 2x7f_A TRAF2 and NCK-interacti 100.0 7.7E-42 2.6E-46 342.8 13.4 260 219-500 13-287 (326)
210 3com_A Serine/threonine-protei 100.0 4.3E-41 1.5E-45 335.5 18.8 251 228-500 27-279 (314)
211 2r3i_A Cell division protein k 100.0 1.5E-41 5.1E-46 336.3 15.2 263 230-500 3-284 (299)
212 2j0j_A Focal adhesion kinase 1 100.0 1.3E-41 4.5E-46 370.7 15.9 257 227-504 387-649 (656)
213 1phk_A Phosphorylase kinase; g 100.0 3.7E-41 1.3E-45 333.3 17.5 253 229-500 16-284 (298)
214 3cek_A Dual specificity protei 100.0 2.6E-41 9E-46 337.0 16.4 256 226-501 24-294 (313)
215 3sv0_A Casein kinase I-like; t 100.0 2.9E-40 9.8E-45 346.7 24.7 259 229-504 6-276 (483)
216 4e7w_A Glycogen synthase kinas 100.0 1.2E-41 4.1E-46 350.2 13.9 258 230-500 40-322 (394)
217 2xrw_A Mitogen-activated prote 100.0 1.3E-40 4.3E-45 340.0 20.9 264 230-501 25-320 (371)
218 3kvw_A DYRK2, dual specificity 100.0 2.4E-41 8.2E-46 351.6 15.0 196 230-435 97-303 (429)
219 2b9h_A MAP kinase FUS3, mitoge 100.0 1.4E-41 4.9E-46 344.7 13.0 264 229-501 10-307 (353)
220 1wak_A Serine/threonine-protei 100.0 1.4E-40 4.9E-45 342.7 20.4 262 230-500 37-392 (397)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 1E-41 3.4E-46 340.8 10.6 261 223-505 26-301 (319)
222 2wtk_C Serine/threonine-protei 100.0 2.4E-40 8.2E-45 328.6 20.4 250 229-500 4-264 (305)
223 2j7t_A Serine/threonine-protei 100.0 1.2E-40 4E-45 330.4 18.1 253 229-501 18-277 (302)
224 3e3p_A Protein kinase, putativ 100.0 5.4E-41 1.9E-45 341.4 15.9 270 223-500 16-315 (360)
225 1blx_A Cyclin-dependent kinase 100.0 4.4E-41 1.5E-45 337.2 15.1 264 228-500 9-297 (326)
226 1j1b_A Glycogen synthase kinas 100.0 3.4E-41 1.1E-45 349.7 13.9 256 231-500 55-337 (420)
227 2fst_X Mitogen-activated prote 100.0 7.6E-41 2.6E-45 340.6 16.3 262 230-501 29-313 (367)
228 1z57_A Dual specificity protei 100.0 1.8E-40 6.2E-45 334.3 18.8 257 230-500 14-329 (339)
229 2wei_A Calmodulin-domain prote 100.0 1E-40 3.6E-45 328.4 16.4 252 229-500 21-277 (287)
230 3aln_A Dual specificity mitoge 100.0 7.7E-41 2.6E-45 335.7 15.5 254 230-500 22-286 (327)
231 3rgf_A Cyclin-dependent kinase 100.0 2.4E-40 8.1E-45 342.1 18.3 264 232-502 22-336 (405)
232 4exu_A Mitogen-activated prote 100.0 5.4E-40 1.9E-44 335.3 20.0 259 230-502 42-326 (371)
233 1zy4_A Serine/threonine-protei 100.0 2.7E-40 9.2E-45 327.6 16.1 252 229-501 5-285 (303)
234 2vx3_A Dual specificity tyrosi 100.0 1.9E-39 6.4E-44 332.7 22.3 199 228-434 52-261 (382)
235 2iwi_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 328.0 16.7 247 226-502 27-286 (312)
236 3coi_A Mitogen-activated prote 100.0 6.9E-40 2.4E-44 332.4 18.3 259 230-501 24-307 (353)
237 3a99_A Proto-oncogene serine/t 100.0 3.2E-40 1.1E-44 330.1 15.5 244 228-501 41-295 (320)
238 3fhr_A MAP kinase-activated pr 100.0 5.9E-40 2E-44 330.4 16.7 251 229-500 27-288 (336)
239 1q8y_A SR protein kinase; tran 100.0 1E-39 3.4E-44 333.7 18.6 262 230-500 19-334 (373)
240 2rio_A Serine/threonine-protei 100.0 6.5E-40 2.2E-44 341.5 17.2 249 232-501 17-297 (434)
241 2eu9_A Dual specificity protei 100.0 1.6E-39 5.3E-44 329.7 18.7 257 230-500 19-334 (355)
242 2i6l_A Mitogen-activated prote 100.0 1.7E-40 5.7E-45 331.9 11.3 262 230-500 11-306 (320)
243 2dyl_A Dual specificity mitoge 100.0 2.7E-39 9.3E-44 322.9 18.6 251 230-500 25-284 (318)
244 3qa8_A MGC80376 protein; kinas 100.0 3E-40 1E-44 354.1 10.2 258 229-497 13-295 (676)
245 3p23_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 334.9 16.8 248 230-500 24-284 (432)
246 2pzi_A Probable serine/threoni 100.0 1.2E-38 4E-43 350.5 16.8 238 230-503 80-325 (681)
247 3uqc_A Probable conserved tran 100.0 7.2E-38 2.5E-42 307.6 16.2 230 230-504 31-263 (286)
248 2vuw_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 319.6 11.2 243 230-500 20-332 (336)
249 3m2w_A MAP kinase-activated pr 100.0 3E-37 1E-41 305.6 17.5 225 230-500 17-257 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 2E-38 6.8E-43 328.1 8.8 240 230-500 78-364 (413)
251 4azs_A Methyltransferase WBDD; 100.0 3.5E-31 1.2E-35 283.4 8.1 186 238-431 242-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.6E-27 5.5E-32 253.6 10.7 185 233-431 339-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.3E-24 4.5E-29 212.2 10.8 153 224-405 84-253 (282)
254 2v9t_B SLIT homolog 2 protein 99.8 4.9E-20 1.7E-24 173.1 12.0 134 2-135 32-170 (220)
255 1zth_A RIO1 serine protein kin 99.8 6.7E-20 2.3E-24 176.6 12.1 138 232-381 49-220 (258)
256 3e6j_A Variable lymphocyte rec 99.8 2.5E-19 8.7E-24 169.3 13.3 132 2-134 40-176 (229)
257 2v70_A SLIT-2, SLIT homolog 2 99.8 2E-19 6.9E-24 168.9 11.2 134 2-135 32-171 (220)
258 3m19_A Variable lymphocyte rec 99.8 6.4E-19 2.2E-23 169.1 13.8 113 3-115 36-148 (251)
259 3rfs_A Internalin B, repeat mo 99.8 2.7E-18 9.2E-23 166.8 13.8 132 2-133 85-221 (272)
260 2o6s_A Variable lymphocyte rec 99.8 3.6E-18 1.2E-22 158.9 13.9 133 2-134 28-165 (208)
261 1p9a_G Platelet glycoprotein I 99.8 3.9E-18 1.4E-22 167.1 13.3 132 2-134 77-212 (290)
262 2o6q_A Variable lymphocyte rec 99.8 5.4E-18 1.8E-22 164.5 13.9 130 1-130 60-194 (270)
263 3rgz_A Protein brassinosteroid 99.8 1.4E-18 4.9E-23 193.5 10.8 115 25-140 631-749 (768)
264 2wfh_A SLIT homolog 2 protein 99.7 1.1E-17 3.6E-22 153.7 12.1 127 5-135 13-144 (193)
265 1w8a_A SLIT protein; signaling 99.7 5.8E-18 2E-22 155.4 10.0 127 5-134 11-143 (192)
266 1ozn_A Reticulon 4 receptor; N 99.7 4.3E-18 1.5E-22 166.5 9.5 132 3-134 106-242 (285)
267 1w8a_A SLIT protein; signaling 99.7 8.8E-18 3E-22 154.1 10.5 131 3-133 30-165 (192)
268 3m19_A Variable lymphocyte rec 99.7 2.5E-17 8.6E-22 157.9 13.6 132 1-132 58-194 (251)
269 2xot_A Amphoterin-induced prot 99.7 4.7E-18 1.6E-22 172.2 8.3 133 2-134 64-206 (361)
270 4gyi_A RIO2 kinase; protein ki 99.7 5.6E-18 1.9E-22 169.5 8.5 144 229-381 94-266 (397)
271 1ogq_A PGIP-2, polygalacturona 99.7 5.6E-18 1.9E-22 168.1 7.4 132 1-133 148-307 (313)
272 3oja_A Leucine-rich immune mol 99.7 2.5E-18 8.7E-23 181.0 5.1 30 271-300 323-352 (487)
273 2v70_A SLIT-2, SLIT homolog 2 99.7 1.9E-17 6.6E-22 155.3 10.2 115 1-115 56-170 (220)
274 2z66_A Variable lymphocyte rec 99.7 1.4E-17 4.7E-22 164.7 9.6 133 2-134 126-265 (306)
275 3v47_A TOLL-like receptor 5B a 99.7 2E-17 6.8E-22 173.0 10.6 133 2-134 275-412 (455)
276 1ogq_A PGIP-2, polygalacturona 99.7 6.4E-18 2.2E-22 167.7 4.6 129 2-130 50-187 (313)
277 2o6q_A Variable lymphocyte rec 99.7 1.4E-16 4.7E-21 154.5 13.8 132 2-133 37-173 (270)
278 3rgz_A Protein brassinosteroid 99.7 3.4E-17 1.2E-21 182.4 10.1 83 49-131 631-718 (768)
279 3rfs_A Internalin B, repeat mo 99.7 2E-16 6.9E-21 153.5 13.8 130 1-132 62-196 (272)
280 2v9t_B SLIT homolog 2 protein 99.7 9.1E-17 3.1E-21 150.7 10.8 115 1-115 55-169 (220)
281 2z62_A TOLL-like receptor 4, v 99.7 1.2E-16 4.1E-21 155.4 10.7 130 1-130 51-190 (276)
282 2o6r_A Variable lymphocyte rec 99.7 3.3E-16 1.1E-20 141.6 12.4 128 4-134 9-141 (177)
283 1p9a_G Platelet glycoprotein I 99.7 2.9E-16 9.9E-21 153.8 12.9 127 2-131 31-162 (290)
284 2ell_A Acidic leucine-rich nuc 99.7 6.6E-17 2.3E-21 144.9 7.5 129 2-132 24-162 (168)
285 1ozn_A Reticulon 4 receptor; N 99.7 2.5E-16 8.6E-21 153.9 12.0 131 2-132 32-168 (285)
286 3zyj_A Leucine-rich repeat-con 99.7 1.7E-16 5.9E-21 165.1 11.4 132 2-135 160-297 (440)
287 4g8a_A TOLL-like receptor 4; l 99.7 1E-16 3.6E-21 174.5 9.9 135 1-135 444-585 (635)
288 2wfh_A SLIT homolog 2 protein 99.7 2.2E-16 7.4E-21 144.9 10.4 113 2-115 31-143 (193)
289 2o6r_A Variable lymphocyte rec 99.7 2.4E-16 8.1E-21 142.5 10.6 115 2-116 28-142 (177)
290 2xot_A Amphoterin-induced prot 99.7 1.5E-16 5.2E-21 161.0 10.1 131 2-132 39-178 (361)
291 2o6s_A Variable lymphocyte rec 99.7 4.8E-16 1.6E-20 144.4 12.2 128 1-130 51-178 (208)
292 3vq2_A TLR4, TOLL-like recepto 99.7 9.1E-17 3.1E-21 174.3 8.3 135 1-135 423-563 (606)
293 4g8a_A TOLL-like receptor 4; l 99.7 1.7E-16 5.9E-21 172.7 10.2 131 2-132 52-188 (635)
294 4fcg_A Uncharacterized protein 99.7 1.7E-16 5.8E-21 158.4 9.3 127 1-130 126-266 (328)
295 3e6j_A Variable lymphocyte rec 99.7 3.5E-16 1.2E-20 147.7 10.9 114 1-115 63-176 (229)
296 3zyi_A Leucine-rich repeat-con 99.6 3.2E-16 1.1E-20 163.6 11.0 113 21-135 191-308 (452)
297 3j0a_A TOLL-like receptor 5; m 99.6 1E-16 3.5E-21 180.4 7.3 132 2-135 426-565 (844)
298 4fcg_A Uncharacterized protein 99.6 3.4E-16 1.1E-20 156.2 10.2 129 1-131 149-291 (328)
299 3g39_A Variable lymphocyte rec 99.6 8.9E-16 3E-20 137.7 10.6 111 3-116 10-120 (170)
300 2je0_A Acidic leucine-rich nuc 99.6 1.6E-16 5.5E-21 139.3 5.4 112 2-115 17-130 (149)
301 2z62_A TOLL-like receptor 4, v 99.6 8.3E-16 2.8E-20 149.5 10.9 130 2-131 28-163 (276)
302 3t6q_A CD180 antigen; protein- 99.6 4.7E-16 1.6E-20 168.7 9.6 133 1-134 424-564 (606)
303 2z66_A Variable lymphocyte rec 99.6 6.6E-16 2.2E-20 152.6 8.3 131 1-132 77-214 (306)
304 2z63_A TOLL-like receptor 4, v 99.6 6.6E-16 2.3E-20 166.1 9.0 133 2-134 396-535 (570)
305 2r9u_A Variable lymphocyte rec 99.6 2.2E-15 7.7E-20 135.6 10.6 110 4-116 14-123 (174)
306 3oja_B Anopheles plasmodium-re 99.6 2.6E-15 8.8E-20 162.4 12.2 130 1-130 74-205 (597)
307 1ziw_A TOLL-like receptor 3; i 99.6 1.6E-15 5.5E-20 166.8 10.4 135 1-135 479-627 (680)
308 2id5_A Lingo-1, leucine rich r 99.6 1.5E-15 5.1E-20 159.7 9.4 132 4-135 202-338 (477)
309 3o6n_A APL1; leucine-rich repe 99.6 4.2E-15 1.4E-19 152.0 12.3 111 2-112 69-179 (390)
310 2id5_A Lingo-1, leucine rich r 99.6 2.1E-15 7.1E-20 158.6 10.3 131 2-132 32-167 (477)
311 3vq2_A TLR4, TOLL-like recepto 99.6 3.9E-15 1.3E-19 161.4 11.9 130 2-131 32-167 (606)
312 2z7x_B TOLL-like receptor 1, v 99.6 2.3E-15 7.8E-20 160.1 9.7 109 1-111 323-434 (520)
313 4ezg_A Putative uncharacterize 99.6 1.5E-15 5.2E-20 139.8 7.2 127 1-132 43-174 (197)
314 4b8c_D Glucose-repressible alc 99.6 8E-16 2.8E-20 169.4 5.7 127 1-131 223-355 (727)
315 3v47_A TOLL-like receptor 5B a 99.6 3.6E-15 1.2E-19 155.8 10.3 116 1-116 298-413 (455)
316 2xwt_C Thyrotropin receptor; s 99.6 1.8E-15 6.3E-20 143.7 7.2 129 2-132 31-171 (239)
317 2ell_A Acidic leucine-rich nuc 99.6 2.2E-15 7.5E-20 134.9 7.3 112 1-115 48-164 (168)
318 3zyi_A Leucine-rich repeat-con 99.6 4.8E-15 1.6E-19 154.7 11.0 131 2-132 75-211 (452)
319 2z80_A TOLL-like receptor 2, v 99.6 3E-15 1E-19 151.0 8.9 131 2-132 52-189 (353)
320 2xwt_C Thyrotropin receptor; s 99.6 2.4E-15 8E-20 143.0 7.5 130 1-132 54-195 (239)
321 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 3.9E-15 1.3E-19 159.9 9.9 133 1-133 352-513 (562)
322 1xku_A Decorin; proteoglycan, 99.6 8.7E-15 3E-19 146.1 11.5 129 1-132 144-278 (330)
323 3o53_A Protein LRIM1, AGAP0063 99.6 2.4E-15 8.2E-20 149.4 7.1 128 2-132 120-252 (317)
324 3t6q_A CD180 antigen; protein- 99.6 5.6E-15 1.9E-19 160.2 10.5 131 2-132 33-168 (606)
325 1ziw_A TOLL-like receptor 3; i 99.6 1.1E-14 3.8E-19 160.1 12.5 131 2-132 25-160 (680)
326 4ezg_A Putative uncharacterize 99.6 5.4E-15 1.9E-19 136.0 8.0 125 1-129 65-193 (197)
327 4eco_A Uncharacterized protein 99.5 1.3E-15 4.4E-20 165.9 4.3 130 1-132 205-368 (636)
328 3zyj_A Leucine-rich repeat-con 99.5 1.2E-14 4E-19 151.2 11.4 131 2-132 64-200 (440)
329 3o6n_A APL1; leucine-rich repe 99.5 6.1E-15 2.1E-19 150.9 9.0 132 1-132 44-180 (390)
330 3oja_B Anopheles plasmodium-re 99.5 7.4E-15 2.5E-19 158.8 9.8 132 1-132 50-186 (597)
331 4glp_A Monocyte differentiatio 99.5 2.7E-15 9.4E-20 148.4 5.7 130 1-131 116-265 (310)
332 1a9n_A U2A', U2A'; complex (nu 99.5 2.6E-15 8.9E-20 135.5 5.0 125 1-130 18-153 (176)
333 1wwl_A Monocyte differentiatio 99.5 3.4E-15 1.1E-19 147.9 6.2 129 1-130 120-266 (312)
334 2z80_A TOLL-like receptor 2, v 99.5 5.3E-15 1.8E-19 149.2 7.7 121 5-128 34-160 (353)
335 3g39_A Variable lymphocyte rec 99.5 1.7E-14 5.9E-19 129.3 10.2 105 27-134 10-119 (170)
336 1wwl_A Monocyte differentiatio 99.5 8.8E-16 3E-20 152.1 1.7 131 1-132 94-243 (312)
337 1dce_A Protein (RAB geranylger 99.5 8.9E-15 3.1E-19 156.2 9.7 109 3-116 442-551 (567)
338 2ft3_A Biglycan; proteoglycan, 99.5 3E-14 1E-18 142.4 12.2 127 2-131 54-186 (332)
339 4eco_A Uncharacterized protein 99.5 2.2E-14 7.6E-19 156.1 12.0 103 27-132 489-602 (636)
340 1h6t_A Internalin B; cell adhe 99.5 3.3E-14 1.1E-18 139.2 11.3 121 2-131 68-192 (291)
341 2z81_A CD282 antigen, TOLL-lik 99.5 8.6E-15 2.9E-19 156.7 7.7 129 2-130 26-161 (549)
342 2je0_A Acidic leucine-rich nuc 99.5 7.3E-15 2.5E-19 128.6 5.8 105 1-107 41-149 (149)
343 3j0a_A TOLL-like receptor 5; m 99.5 1.6E-14 5.4E-19 162.6 10.0 129 2-130 24-161 (844)
344 2z63_A TOLL-like receptor 4, v 99.5 2.4E-14 8.4E-19 153.8 10.9 131 2-132 28-164 (570)
345 2z7x_B TOLL-like receptor 1, v 99.5 1.7E-14 5.8E-19 153.4 9.4 127 3-131 303-435 (520)
346 1xeu_A Internalin C; cellular 99.5 2.6E-14 9.1E-19 137.7 9.9 122 1-132 40-165 (263)
347 2r9u_A Variable lymphocyte rec 99.5 3.9E-14 1.3E-18 127.4 10.3 104 28-134 14-122 (174)
348 1xku_A Decorin; proteoglycan, 99.5 3.8E-14 1.3E-18 141.4 11.3 130 2-134 121-257 (330)
349 4glp_A Monocyte differentiatio 99.5 1.7E-14 5.8E-19 142.7 8.4 131 1-132 144-287 (310)
350 2z81_A CD282 antigen, TOLL-lik 99.5 1.6E-14 5.5E-19 154.6 8.8 129 1-129 49-184 (549)
351 2ft3_A Biglycan; proteoglycan, 99.5 5.7E-14 1.9E-18 140.3 11.8 124 3-130 124-254 (332)
352 4ecn_A Leucine-rich repeat pro 99.5 7.2E-15 2.5E-19 163.6 5.6 128 1-130 447-608 (876)
353 3oja_A Leucine-rich immune mol 99.5 8.6E-15 3E-19 154.0 5.8 129 2-132 34-184 (487)
354 2ifg_A High affinity nerve gro 99.5 3E-14 1E-18 143.3 8.8 127 5-134 11-145 (347)
355 1h6u_A Internalin H; cell adhe 99.5 3.3E-14 1.1E-18 140.4 8.9 125 1-133 84-211 (308)
356 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 5.2E-14 1.8E-18 151.1 10.7 130 2-133 331-466 (562)
357 1h6u_A Internalin H; cell adhe 99.5 8.3E-14 2.8E-18 137.5 11.1 104 3-114 42-145 (308)
358 1h6t_A Internalin B; cell adhe 99.5 5.8E-14 2E-18 137.5 9.6 123 1-132 89-215 (291)
359 4ecn_A Leucine-rich repeat pro 99.5 1E-13 3.5E-18 154.3 12.7 124 3-129 674-818 (876)
360 1a9n_A U2A', U2A'; complex (nu 99.5 3.1E-14 1E-18 128.4 5.8 106 2-111 42-153 (176)
361 1xeu_A Internalin C; cellular 99.5 1.3E-13 4.3E-18 132.9 10.2 123 1-133 62-188 (263)
362 4b8c_D Glucose-repressible alc 99.5 6.8E-14 2.3E-18 154.1 9.2 124 4-131 193-330 (727)
363 1m9s_A Internalin B; cell inva 99.5 1.5E-13 5.3E-18 147.6 11.3 123 1-131 64-189 (605)
364 4fmz_A Internalin; leucine ric 99.5 1.2E-13 4E-18 138.8 9.4 124 1-132 198-326 (347)
365 3o53_A Protein LRIM1, AGAP0063 99.5 1.8E-14 6.2E-19 143.0 3.4 129 2-132 34-184 (317)
366 1m9s_A Internalin B; cell inva 99.4 2.4E-13 8.3E-18 146.1 10.7 123 1-132 86-212 (605)
367 1ds9_A Outer arm dynein; leuci 99.4 1.5E-15 5E-20 140.0 -6.3 127 2-133 18-156 (198)
368 2ifg_A High affinity nerve gro 99.4 2E-13 6.8E-18 137.2 8.0 104 29-134 11-120 (347)
369 1o6v_A Internalin A; bacterial 99.4 6.1E-13 2.1E-17 139.3 9.9 122 1-131 242-367 (466)
370 3cvr_A Invasion plasmid antige 99.4 1.5E-12 5.1E-17 138.5 11.6 114 2-132 80-195 (571)
371 4fmz_A Internalin; leucine ric 99.4 9.8E-13 3.4E-17 132.1 9.1 122 1-131 176-301 (347)
372 1o6v_A Internalin A; bacterial 99.4 1.5E-12 5.2E-17 136.3 10.5 124 1-132 220-346 (466)
373 3bz5_A Internalin-J, INLJ; leu 99.3 3.2E-12 1.1E-16 133.2 11.6 118 1-129 41-160 (457)
374 1dce_A Protein (RAB geranylger 99.3 1.9E-12 6.4E-17 138.3 9.3 102 1-105 462-567 (567)
375 3cvr_A Invasion plasmid antige 99.3 2.7E-12 9.1E-17 136.6 10.3 117 1-134 99-224 (571)
376 4ay9_X Follicle-stimulating ho 99.3 1.5E-12 5E-17 131.0 7.6 103 3-105 31-135 (350)
377 1ds9_A Outer arm dynein; leuci 99.3 8.1E-15 2.8E-19 135.0 -8.4 111 1-116 47-158 (198)
378 3bz5_A Internalin-J, INLJ; leu 99.3 1E-11 3.5E-16 129.4 12.3 121 1-132 126-248 (457)
379 3tm0_A Aminoglycoside 3'-phosp 99.3 1.5E-11 5E-16 118.4 12.1 145 227-378 11-212 (263)
380 1jl5_A Outer protein YOPM; leu 99.3 2.2E-11 7.6E-16 126.7 12.4 116 3-131 132-251 (454)
381 2ast_B S-phase kinase-associat 99.2 3.7E-13 1.3E-17 134.5 -2.1 129 1-129 92-234 (336)
382 3goz_A Leucine-rich repeat-con 99.2 8.6E-13 2.9E-17 133.4 0.2 108 4-111 24-151 (362)
383 3g06_A SSPH2 (leucine-rich rep 99.2 2.6E-11 8.8E-16 130.5 10.5 52 74-130 221-274 (622)
384 3goz_A Leucine-rich repeat-con 99.2 2.8E-12 9.5E-17 129.6 2.7 125 6-130 2-151 (362)
385 2ca6_A RAN GTPase-activating p 99.2 1.1E-12 3.8E-17 133.8 -0.3 111 1-111 93-229 (386)
386 1nd4_A Aminoglycoside 3'-phosp 99.2 1.7E-11 5.9E-16 117.6 8.1 137 231-379 21-214 (264)
387 2ca6_A RAN GTPase-activating p 99.2 3.8E-13 1.3E-17 137.3 -4.0 130 1-130 59-229 (386)
388 2ast_B S-phase kinase-associat 99.2 2.7E-13 9.3E-18 135.5 -5.0 126 2-128 70-206 (336)
389 1jl5_A Outer protein YOPM; leu 99.2 7E-11 2.4E-15 122.9 12.4 97 26-130 131-228 (454)
390 3g06_A SSPH2 (leucine-rich rep 99.2 7.1E-11 2.4E-15 127.1 12.1 53 3-63 62-114 (622)
391 3dxp_A Putative acyl-COA dehyd 99.1 2.5E-10 8.6E-15 115.1 12.6 142 235-379 43-248 (359)
392 4ay9_X Follicle-stimulating ho 99.1 1.9E-10 6.5E-15 115.5 8.1 132 1-133 53-218 (350)
393 3sg8_A APH(2'')-ID; antibiotic 99.0 3.5E-10 1.2E-14 111.2 8.5 187 235-432 25-288 (304)
394 1z7x_W Ribonuclease inhibitor; 99.0 3.9E-12 1.3E-16 132.8 -6.4 130 1-130 226-383 (461)
395 1z7x_W Ribonuclease inhibitor; 98.9 4.4E-11 1.5E-15 124.8 -3.5 130 1-130 255-411 (461)
396 3un9_A NLR family member X1; l 98.9 2.8E-11 9.4E-16 122.4 -6.0 129 2-130 101-252 (372)
397 3sb4_A Hypothetical leucine ri 98.9 2.5E-09 8.5E-14 106.4 7.2 101 2-104 226-327 (329)
398 3sb4_A Hypothetical leucine ri 98.8 4.1E-09 1.4E-13 104.7 8.4 129 1-132 100-312 (329)
399 3un9_A NLR family member X1; l 98.8 1.5E-10 5.3E-15 116.9 -2.7 113 2-114 126-255 (372)
400 3rw6_A Nuclear RNA export fact 98.7 2.2E-09 7.5E-14 102.2 1.5 40 24-63 168-209 (267)
401 1io0_A Tropomodulin; LRR prote 98.6 2.1E-09 7.3E-14 97.3 -1.1 110 2-111 36-164 (185)
402 3r70_A Aminoglycoside phosphot 98.6 3E-07 1E-11 90.8 13.5 136 231-379 38-237 (320)
403 3d1u_A Putative fructosamine-3 98.6 6E-07 2.1E-11 87.0 13.8 75 235-314 20-97 (288)
404 3rw6_A Nuclear RNA export fact 98.6 2.7E-08 9.3E-13 94.7 3.7 78 1-80 169-257 (267)
405 3ogk_B Coronatine-insensitive 98.5 2.6E-08 8.8E-13 107.2 1.8 103 4-107 140-252 (592)
406 3ogk_B Coronatine-insensitive 98.4 2.3E-07 7.7E-12 99.8 6.1 126 1-128 163-304 (592)
407 3tdw_A Gentamicin resistance p 98.4 3.5E-06 1.2E-10 82.5 13.3 135 236-379 25-224 (306)
408 3ats_A Putative uncharacterize 98.3 1.6E-06 5.5E-11 86.9 10.4 144 236-379 26-252 (357)
409 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.8E-06 1.3E-10 84.2 12.6 138 235-379 46-243 (362)
410 4gkh_A Aminoglycoside 3'-phosp 98.3 5.6E-06 1.9E-10 79.4 12.9 135 237-379 31-223 (272)
411 2p1m_B Transport inhibitor res 98.3 1.2E-08 4.1E-13 109.9 -6.9 110 1-112 337-470 (594)
412 2ra8_A Uncharacterized protein 98.2 9.4E-08 3.2E-12 95.7 -1.0 126 1-129 171-319 (362)
413 4fdw_A Leucine rich hypothetic 98.2 1.3E-06 4.6E-11 88.8 7.5 124 1-129 225-357 (401)
414 1io0_A Tropomodulin; LRR prote 98.2 4.4E-08 1.5E-12 88.5 -3.5 112 18-129 28-163 (185)
415 4fdw_A Leucine rich hypothetic 98.2 2.5E-06 8.6E-11 86.8 8.4 121 2-127 203-333 (401)
416 2p1m_B Transport inhibitor res 98.1 3.1E-07 1.1E-11 98.8 0.4 87 23-109 102-195 (594)
417 2ra8_A Uncharacterized protein 98.1 4.7E-07 1.6E-11 90.6 -0.0 128 1-131 138-293 (362)
418 2olc_A MTR kinase, methylthior 98.0 2.5E-05 8.4E-10 79.4 11.8 76 235-312 35-120 (397)
419 2q83_A YTAA protein; 2635576, 97.9 4.3E-05 1.5E-09 75.7 11.2 136 237-378 39-251 (346)
420 3jr1_A Putative fructosamine-3 97.8 0.00012 4.2E-09 71.3 11.8 135 235-375 41-232 (312)
421 3e4g_A ATP synthase subunit S, 97.8 3.2E-06 1.1E-10 74.6 -0.4 92 18-109 53-150 (176)
422 3f7w_A Putative fructosamine-3 97.8 0.00021 7.1E-09 69.0 12.5 79 231-314 16-97 (288)
423 3e4g_A ATP synthase subunit S, 97.8 3.6E-06 1.2E-10 74.3 -0.1 83 3-85 62-150 (176)
424 2pyw_A Uncharacterized protein 97.7 0.00019 6.4E-09 73.5 12.6 78 348-427 231-312 (420)
425 1pgv_A TMD-1, tropomodulin TMD 97.5 1.6E-05 5.6E-10 71.4 -0.1 85 24-108 39-136 (197)
426 2ppq_A HSK, HK, homoserine kin 97.5 0.00056 1.9E-08 67.0 10.9 155 220-378 7-216 (322)
427 3dxq_A Choline/ethanolamine ki 97.4 0.00076 2.6E-08 65.5 10.9 71 235-314 23-95 (301)
428 4gt6_A Cell surface protein; l 97.4 0.00032 1.1E-08 71.0 8.4 85 19-106 258-342 (394)
429 4fs7_A Uncharacterized protein 97.4 0.00016 5.5E-09 73.3 6.1 86 20-108 291-376 (394)
430 4h09_A Hypothetical leucine ri 97.4 0.00021 7.3E-09 71.9 6.8 114 2-119 217-330 (379)
431 3rfe_A Platelet glycoprotein I 97.4 0.00027 9.3E-09 59.2 6.2 37 51-87 32-68 (130)
432 4gt6_A Cell surface protein; l 97.3 0.0002 6.9E-09 72.5 6.1 106 1-110 264-369 (394)
433 3csv_A Aminoglycoside phosphot 97.3 0.00081 2.8E-08 66.3 9.6 32 348-379 182-217 (333)
434 1nw1_A Choline kinase (49.2 KD 97.3 0.0012 4E-08 67.6 11.0 72 236-314 79-159 (429)
435 1zyl_A Hypothetical protein YI 97.3 0.0022 7.4E-08 63.0 12.6 138 237-379 33-223 (328)
436 3rfe_A Platelet glycoprotein I 97.2 0.0004 1.4E-08 58.2 5.9 59 53-113 11-70 (130)
437 3feg_A Choline/ethanolamine ki 97.1 0.0026 8.8E-08 63.7 11.6 138 236-379 56-254 (379)
438 4h09_A Hypothetical leucine ri 97.0 0.0014 4.7E-08 65.9 8.7 101 3-106 241-341 (379)
439 2yle_A Protein spire homolog 1 97.0 0.0022 7.7E-08 57.9 8.9 98 312-426 33-131 (229)
440 4fs7_A Uncharacterized protein 97.0 0.00056 1.9E-08 69.2 5.7 111 2-119 253-363 (394)
441 3c5i_A Choline kinase; choline 96.9 0.0029 9.7E-08 63.3 9.9 73 236-314 39-121 (369)
442 2qg7_A Ethanolamine kinase PV0 96.9 0.0046 1.6E-07 63.6 11.6 73 236-314 114-188 (458)
443 3i1a_A Spectinomycin phosphotr 96.6 0.02 6.8E-07 56.4 12.8 32 348-379 205-236 (339)
444 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00056 1.9E-08 61.4 0.3 108 2-109 41-168 (197)
445 3f2s_A CK, chetk-alpha, cholin 96.0 0.032 1.1E-06 56.0 10.8 139 236-378 58-279 (401)
446 2ks1_B Epidermal growth factor 95.9 0.0064 2.2E-07 39.3 3.3 31 169-199 12-42 (44)
447 2l2t_A Receptor tyrosine-prote 95.3 0.0072 2.5E-07 38.9 1.9 31 169-199 11-41 (44)
448 2jwa_A Receptor tyrosine-prote 95.3 0.0082 2.8E-07 38.6 2.0 30 169-198 12-41 (44)
449 3mes_A Choline kinase; malaria 95.0 0.075 2.6E-06 53.8 9.4 137 236-379 76-291 (424)
450 3g15_A CK, chetk-alpha, cholin 91.4 1 3.6E-05 45.1 10.9 30 350-379 245-280 (401)
451 4ann_A ESSB; membrane protein, 90.1 0.78 2.7E-05 41.3 7.4 116 285-432 43-158 (215)
452 2k9y_A Ephrin type-A receptor 88.5 0.14 4.7E-06 32.7 1.0 28 168-195 13-40 (41)
453 1iij_A ERBB-2 receptor protein 86.8 0.083 2.8E-06 32.0 -0.8 26 171-196 10-35 (35)
454 4ano_A ESSB; membrane protein, 86.5 2 7E-05 38.7 7.8 115 285-432 48-163 (219)
455 3cxl_A N-chimerin; SH2, RHO-GA 82.8 0.14 4.8E-06 52.6 -1.8 61 234-297 146-214 (463)
456 2k1k_A Ephrin type-A receptor 80.3 1 3.4E-05 28.1 2.1 24 171-194 13-37 (38)
457 2l9u_A Receptor tyrosine-prote 72.8 2 6.7E-05 25.5 1.8 26 171-196 9-34 (40)
458 2lz0_A Uncharacterized protein 71.9 7.7 0.00026 30.0 5.8 16 20-35 14-29 (100)
459 2l6w_A Beta-type platelet-deri 73.7 0.84 2.9E-05 28.1 0.0 29 168-196 8-36 (39)
460 2lz0_A Uncharacterized protein 70.7 5.2 0.00018 31.0 4.5 49 35-84 5-53 (100)
461 2l34_A TYRO protein tyrosine k 52.8 8.8 0.0003 22.9 2.1 24 171-194 9-32 (33)
462 2l8s_A Integrin alpha-1; trans 48.5 11 0.00037 25.3 2.2 15 168-182 9-23 (54)
463 2klu_A T-cell surface glycopro 45.6 11 0.00036 26.3 1.9 10 171-180 13-22 (70)
464 2ks1_B Epidermal growth factor 37.1 25 0.00085 22.5 2.5 31 167-197 13-43 (44)
465 2jwa_A Receptor tyrosine-prote 35.1 19 0.00066 23.0 1.8 31 167-198 14-44 (44)
466 2knc_A Integrin alpha-IIB; tra 29.9 32 0.0011 23.1 2.3 14 168-181 12-25 (54)
467 1cja_A Protein (actin-fragmin 24.0 1.7E+02 0.0059 27.9 7.1 75 301-379 156-237 (342)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.8e-57 Score=446.44 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=210.0
Q ss_pred CCCCCCeeeeeCceEEEEEEEC------CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++++.+.||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|+|...+..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3456688999999999999863 4678999999866555556789999999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc
Q 008828 305 VYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 368 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 368 (552)
|||||++|+|.+++... ..++|..+..|+.|||+||+|||++ +||||||||+|||++++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 99999999999999532 3589999999999999999999999 9999999999999999999
Q ss_pred eEEcccccceecCCCCC-ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHH
Q 008828 369 AVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDW 446 (552)
Q Consensus 369 ~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 446 (552)
+||+|||+++.....+. .......||+.|||||++.++.|+.++|||||||++|||+| |+.||..... .+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-------~~~ 256 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------QDV 256 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-------HHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-------HHH
Confidence 99999999987643322 22344569999999999999999999999999999999999 8999864321 111
Q ss_pred HHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 447 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
+..+... ...+.+..++..+.+|+.+||+.||++||||.||+++|+.
T Consensus 257 ~~~i~~~----------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 257 VEMIRNR----------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHHTT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHcC----------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 2222111 1112334456789999999999999999999999999986
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=8.7e-57 Score=441.99 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=208.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC------CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCcee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~ 303 (552)
++|.+.+.||+|+||+||+|++. ++..||||+++... ....++|.+|++++++++|||||+++|+|.+.+..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 45777889999999999999864 47889999997543 234567999999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhccC-------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceE
Q 008828 304 LVYPYMSNGSVASRLKAK-------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV 370 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~-------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 370 (552)
+|||||++|+|.++++.. ..++|..+..|+.|||+||.|||++ +|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 999999999999999643 3699999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCce-eecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHH
Q 008828 371 VGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 448 (552)
Q Consensus 371 l~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 448 (552)
|+|||+++.....+... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.+.
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~~ 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEVIE 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHH
Confidence 99999998765433222 233469999999999999999999999999999999999 8999974321 11122
Q ss_pred HHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 449 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.+.... ....+..+++++.+|+.+||+.||++||||+||.+.|+.
T Consensus 242 ~i~~~~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 242 CITQGR----------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHcCC----------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 221111 112233455789999999999999999999999999875
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.3e-56 Score=443.07 Aligned_cols=254 Identities=25% Similarity=0.406 Sum_probs=203.3
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC------CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCcee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~ 303 (552)
++|.+.+.||+|+||+||+|+++ +++.||||+++... ....++|.+|++++++++|||||+++|+|.+....+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 35666789999999999999864 47899999997543 334567999999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhccC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc
Q 008828 304 LVYPYMSNGSVASRLKAK---------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 368 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 368 (552)
+|||||++|+|.++++.. .+++|.++..|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 999999999999998642 3699999999999999999999998 9999999999999999999
Q ss_pred eEEcccccceecCCCCC-ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHH
Q 008828 369 AVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDW 446 (552)
Q Consensus 369 ~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 446 (552)
+||+|||+++.....+. .......||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~ 269 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-------TEA 269 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-------HHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-------HHH
Confidence 99999999987654332 23344669999999999999999999999999999999999 8999974321 111
Q ss_pred HHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 447 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
+..+.... ....+..+++++.+|+.+||+.||++||||+||+++|+..
T Consensus 270 ~~~i~~g~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 270 IDCITQGR----------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp HHHHHHTC----------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHcCC----------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 12221111 1122334557899999999999999999999999999863
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-55 Score=433.58 Aligned_cols=257 Identities=28% Similarity=0.405 Sum_probs=202.5
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.+++.+.+.||+|+||+||+|++++ .||||+++..... .....|.+|+.++++++|||||+++|++.. +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4567788999999999999999753 5999999754322 334579999999999999999999999864 56899999
Q ss_pred eccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC-C
Q 008828 308 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-S 385 (552)
Q Consensus 308 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 385 (552)
||++|+|.++++. ...++|..+..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+...... .
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999964 45799999999999999999999998 99999999999999999999999999998765332 2
Q ss_pred ceeecccccccccCchhhcc---CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 386 HVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
.......||+.|||||++.+ +.|+.++|||||||++|||+||+.||...... ..+....... ...+
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-------~~~~~~~~~~----~~~p 257 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-------DQIIFMVGRG----YASP 257 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHHHHTT----CCCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcC----CCCC
Confidence 23445679999999999964 46899999999999999999999999743221 1111111111 1111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.+ ...+..++..+.+|+.+||+.||++||||.||+++|+.
T Consensus 258 ~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp CS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred Cc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11 12233455789999999999999999999999998875
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.4e-55 Score=439.21 Aligned_cols=265 Identities=26% Similarity=0.378 Sum_probs=216.8
Q ss_pred cCHHHHHHHhcCCCCCCeeeeeCceEEEEEEECC------CcEEEEEEeccCccCchHHHHHHHHHHHhhccc-ccccee
Q 008828 220 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH-RNLLRL 292 (552)
Q Consensus 220 ~~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h-~niv~l 292 (552)
+..++++...++|++.+.||+|+||+||+|.+.. ++.||||+++..........|.+|+.++.++.| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3445566667889999999999999999998642 358999999876555556679999999999965 899999
Q ss_pred eeEeecC-CceeEEEeeccCCChhhhhcc----------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcC
Q 008828 293 IGFCMTT-TERLLVYPYMSNGSVASRLKA----------------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 355 (552)
Q Consensus 293 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~----------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~d 355 (552)
+|+|... ...++|||||++|+|.++++. ...+++..+..|+.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999765 568999999999999999964 23589999999999999999999999 999999
Q ss_pred CCCCceeeCCCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCcccc
Q 008828 356 VKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEF 433 (552)
Q Consensus 356 lk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~ 433 (552)
|||+|||+++++.+||+|||+|+.+...... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999977544333 3345679999999999999999999999999999999998 8999974
Q ss_pred CcccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 434 GKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.... . .....+... .....+..+++++.+++.+||+.||++|||+.||+++|+.
T Consensus 291 ~~~~---~---~~~~~i~~g----------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 291 VKID---E---EFCRRLKEG----------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp CCCS---H---HHHHHHHHT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCHH---H---HHHHHHHcC----------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 3221 0 111111111 1112233345789999999999999999999999999875
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.6e-55 Score=435.07 Aligned_cols=250 Identities=21% Similarity=0.289 Sum_probs=203.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|++.+.||+|+||+||+|+.. +|+.||||+++..... .....+.+|+.++++++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57889999999999999999975 6999999999754332 234578999999999999999999999999999999999
Q ss_pred eccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 308 YMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 308 ~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
||++|+|.+++... ..+++..++.|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+|+.+... .
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-V 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-H
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC-c
Confidence 99999999999643 4679999999999999999999999 9999999999999999999999999999876421 1
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+.+..+.....
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~~~~---------- 242 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-------KNLVLKIISGSF---------- 242 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTCC----------
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCCC----------
Confidence 223456799999999999999999999999999999999999999974322 122222221110
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+...+.++.+|+.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 243 PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11122334779999999999999999999999864
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.6e-54 Score=428.37 Aligned_cols=250 Identities=22% Similarity=0.206 Sum_probs=205.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
+.|...+.||+|+||+||+|+.+ +|+.||||+++.... ..+|+.+++.++|||||++++++.+.+..++||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45677789999999999999975 689999999975432 24799999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC-ceEEcccccceecCCCCCc-
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY-EAVVGDFGLAKLLDHCDSH- 386 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~~~~- 386 (552)
|++|+|.++++..+.+++..+..|+.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 99999999999888899999999999999999999999 999999999999999987 6999999999977543221
Q ss_pred ---eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 387 ---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 387 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
.....+||+.|||||++.+..|+.++|||||||++|||+||+.||....... +.. .+.....
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~---~i~~~~~-------- 273 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP----LCL---KIASEPP-------- 273 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC----CHH---HHHHSCC--------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HHH---HHHcCCC--------
Confidence 1234579999999999999999999999999999999999999997533211 111 1111110
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.....+...+..+.+++.+||+.||++|||+.|++++|..
T Consensus 274 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 274 PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 0011233345789999999999999999999999998764
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.8e-55 Score=427.41 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=210.2
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. .......+.+|++++++++|||||++++++.+.+..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46889999999999999999975 68999999996432 2233557899999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC-
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS- 385 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~- 385 (552)
||+++|+|.+++...+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999999999888899999999999999999999999 999999999999999999999999999998754332
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ......+....
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~----------- 250 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-------GLIFAKIIKLE----------- 250 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-----------
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCC-----------
Confidence 234567899999999999999999999999999999999999999974322 11111211110
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 498 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 498 (552)
..++...++++.+|+.+||+.||++|||++|++
T Consensus 251 ~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 251 YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 012223346789999999999999999999874
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8e-54 Score=426.10 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=208.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
+.|+..+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+|+.+++.++|||||++++++.+.+..|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 45888899999999999999975 699999999965432 2345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCcee
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 388 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 388 (552)
|++|+|.+++... .+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.... ...
T Consensus 153 ~~gg~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 227 (346)
T 4fih_A 153 LEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 227 (346)
T ss_dssp CTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred CCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence 9999999999764 599999999999999999999999 99999999999999999999999999999775432 234
Q ss_pred ecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcC
Q 008828 389 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 468 (552)
Q Consensus 389 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (552)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||..... ...+..+... ..+.+ ..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~------~~~~~--~~ 292 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDN------LPPRL--KN 292 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHS------SCCCC--SC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcC------CCCCC--Cc
Confidence 456799999999999999999999999999999999999999974321 1111111111 01111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 469 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 469 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
....++++.+|+.+||+.||++|||+.|++++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 22334788999999999999999999999864
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-54 Score=420.66 Aligned_cols=248 Identities=25% Similarity=0.387 Sum_probs=199.0
Q ss_pred CCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeec----CCceeEEE
Q 008828 233 SSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTERLLVY 306 (552)
Q Consensus 233 ~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~----~~~~~lv~ 306 (552)
...+.||+|+||+||+|.+. ++..||+|++...... .....|.+|+.++++++|||||++++++.. ....++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999975 5889999999754332 234569999999999999999999999865 34578999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC-CCCceEEcccccceecCCCCC
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|||++|+|.+++.....+++..+..|+.||+.||+|||++ .++|+||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~--- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT---
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC---
Confidence 9999999999999888899999999999999999999998 12399999999999998 489999999999986432
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... .......+..... .
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~------~~~~~~~i~~~~~---------~ 248 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRVTSGVK---------P 248 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHHTTTCC---------C
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc------HHHHHHHHHcCCC---------C
Confidence 23445679999999998864 699999999999999999999999964221 1111111111100 0
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..++...++++.+|+.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11112223578999999999999999999999864
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-53 Score=413.13 Aligned_cols=247 Identities=20% Similarity=0.310 Sum_probs=194.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... ......+.+|+++++.++|||||++++++.+.+..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999964 699999999975432 223457899999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+ +|+|.+++...+.+++..+..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+..... .
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--N 166 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC--C
Confidence 999 689999998888999999999999999999999999 9999999999999999999999999999876532 2
Q ss_pred eeecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ......+....
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-------~~~~~~i~~~~----------- 228 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGV----------- 228 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-----------
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-----------
Confidence 3345679999999999998876 5799999999999999999999974321 12222221111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..++...++++.+++.+||+.||++|||++|++++
T Consensus 229 ~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 01222334778999999999999999999999874
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-53 Score=421.79 Aligned_cols=266 Identities=23% Similarity=0.324 Sum_probs=200.6
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCC----ceeEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT----ERLLV 305 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~----~~~lv 305 (552)
++|.+.+.||+|+||+||+|++. |+.||||+++.... ....+..|+..+.+++|||||+++|+|...+ ..++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~--~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch--hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 34667789999999999999985 89999999964321 1222345666667889999999999998654 57899
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCceEEcCCCCCceeeCCCCceEEcccccceec
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ-----CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 380 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 380 (552)
||||++|+|.++++.. .++|+.+.+++.|+|+||+|||++ ..++|+||||||+|||++.++++||+|||+++..
T Consensus 80 ~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999999865 599999999999999999999976 2458999999999999999999999999999877
Q ss_pred CCCCCce---eecccccccccCchhhccC------CCCCccchhHHHHHHHHHHhCCCccccCccccc-------ccchH
Q 008828 381 DHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISGLRALEFGKTANQ-------KGAML 444 (552)
Q Consensus 381 ~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~-------~~~~~ 444 (552)
....... .....||+.|||||++.+. .++.++|||||||++|||+||+.|+........ .....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 5443322 2345699999999999764 467899999999999999999888754322110 00011
Q ss_pred HHHHHHhhhcchhhhccccccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 445 DWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
..+...... ...++.+... .....+..+.+|+.+||+.||++||||.||++.|+.
T Consensus 239 ~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 239 EEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp HHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 111111111 1112222111 123456789999999999999999999999999976
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.5e-52 Score=427.02 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=208.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
+.|+..+.||+|+||+||+|+.. +|+.||||++..... .....+.+|+.+|+.++|||||++++++...+..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56888999999999999999975 699999999975432 2345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCcee
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 388 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 388 (552)
|++|+|.+++... .+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.... ...
T Consensus 230 ~~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 304 (423)
T 4fie_A 230 LEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 304 (423)
T ss_dssp CTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred CCCCcHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence 9999999999765 599999999999999999999999 99999999999999999999999999998775432 234
Q ss_pred ecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcC
Q 008828 389 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 468 (552)
Q Consensus 389 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (552)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ...+..+... ..+.+ ..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~------~~~~~--~~ 369 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDN------LPPRL--KN 369 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHS------CCCCC--SC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcC------CCCCC--cc
Confidence 556799999999999999999999999999999999999999974321 1111111111 11111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 469 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 469 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
....+.++.+|+.+||+.||++|||+.|++++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12234778999999999999999999999864
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.6e-54 Score=420.47 Aligned_cols=249 Identities=23% Similarity=0.294 Sum_probs=199.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC----CCcEEEEEEeccCcc-CchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++|++.+.||+|+||+||+|+.. +++.||||+++.... .....++.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56899999999999999999852 478999999975432 1223468899999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 305 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
||||+++|+|.+++...+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 999999999999999888899999999999999999999999 99999999999999999999999999998654322
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+....+... .
T Consensus 181 -~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~~---------~- 242 (304)
T 3ubd_A 181 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-------KETMTMILKA---------K- 242 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHC---------C-
T ss_pred -ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-------HHHHHHHHcC---------C-
Confidence 223456799999999999999999999999999999999999999974322 1111221111 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKM-----SEVVRM 500 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 500 (552)
..++...++++.+|+.+||+.||++|||+ +|++++
T Consensus 243 -~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 243 -LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred -CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 11223345778999999999999999985 566543
No 15
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.8e-52 Score=415.60 Aligned_cols=311 Identities=71% Similarity=1.124 Sum_probs=262.8
Q ss_pred hhhhhhcCCccccCHHHHHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcccc
Q 008828 208 RREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR 287 (552)
Q Consensus 208 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~ 287 (552)
.......+.++.+++.++....++|.+.+.||+|+||+||+|...+++.||||+++..........+.+|+.++..++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ 87 (326)
T 3uim_A 8 EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87 (326)
T ss_dssp -------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCT
T ss_pred cCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCC
Confidence 33444556788899999999999999999999999999999998889999999997655444445789999999999999
Q ss_pred ccceeeeEeecCCceeEEEeeccCCChhhhhccC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee
Q 008828 288 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 363 (552)
Q Consensus 288 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 363 (552)
||+++++++......++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+.++|+||||||+|||+
T Consensus 88 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~ 167 (326)
T 3uim_A 88 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 167 (326)
T ss_dssp TBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE
T ss_pred CccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE
Confidence 9999999999999999999999999999999753 349999999999999999999999877799999999999999
Q ss_pred CCCCceEEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccc-cccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTAN-QKGA 442 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~-~~~~ 442 (552)
+.++.+||+|||+++..............||+.|+|||.+.+..++.++|||||||++|||+||+.||....... ....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 247 (326)
T 3uim_A 168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247 (326)
T ss_dssp CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSB
T ss_pred CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchh
Confidence 999999999999999876555555566679999999999999999999999999999999999999997433222 2334
Q ss_pred hHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCchhhhHhhhhhh
Q 008828 443 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLAEKWAASQKAEA 518 (552)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 518 (552)
..+|+...........+.+......+....+..+.+++.+||+.||.+|||+.||+++|++....+.|...++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~ 323 (326)
T 3uim_A 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEM 323 (326)
T ss_dssp HHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-------
T ss_pred HHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHHHh
Confidence 5578877777778888888888888899999999999999999999999999999999999998888876555443
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.3e-52 Score=408.08 Aligned_cols=249 Identities=20% Similarity=0.305 Sum_probs=189.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCC--------
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT-------- 300 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~-------- 300 (552)
++|++.+.||+|+||+||+|+.+ +|+.||||+++..........+.+|+.++++++|||||++++++...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35888899999999999999975 689999999976544444567899999999999999999999987544
Q ss_pred ----ceeEEEeeccCCChhhhhccCCC---CCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcc
Q 008828 301 ----ERLLVYPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 373 (552)
Q Consensus 301 ----~~~lv~e~~~~g~L~~~l~~~~~---l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 373 (552)
..++|||||++|+|.+++..... .++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999986544 45567889999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCc-----------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccc
Q 008828 374 FGLAKLLDHCDSH-----------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA 442 (552)
Q Consensus 374 fg~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~ 442 (552)
||+|+.+...... .....+||+.|||||++.+..|+.++|||||||++|||++ ||.....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~------ 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME------ 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH------
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH------
Confidence 9999876543221 1234569999999999999999999999999999999996 6642110
Q ss_pred hHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 443 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
....+.... .... +.......+.+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~---------~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 RVRTLTDVR---------NLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHH---------TTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHh---------cCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001111111 1000 01112233567889999999999999999999874
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=406.40 Aligned_cols=263 Identities=18% Similarity=0.261 Sum_probs=203.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeec------CCc
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT------TTE 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~------~~~ 301 (552)
++|++.+.||+|+||+||+|+.. +|+.||||+++..... .....+.+|+.+|+.++|||||++++++.. ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57889999999999999999975 6999999999754332 234568899999999999999999998764 356
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
.|+|||||+ |+|.+++...+.+++..+..|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+++.+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 799999996 68999999888999999999999999999999999 99999999999999999999999999998764
Q ss_pred CCC---CceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchh
Q 008828 382 HCD---SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 457 (552)
Q Consensus 382 ~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (552)
... .......+||+.|+|||++.+. .++.++||||+||++|||+||+.||...........+. .........
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~----~~~g~p~~~ 285 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM----MVLGTPSPA 285 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHH----HHHCCCCGG
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHH----HhcCCCChH
Confidence 322 2233456799999999998875 56999999999999999999999997543211111010 000000000
Q ss_pred h-----------h---ccccccCc---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 458 M-----------L---VDKDLKNN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 458 ~-----------~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. . ..+..... ..+..+.++.+|+.+||+.||++|||+.|+++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 0 00000000 001124678999999999999999999999875
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.4e-48 Score=394.49 Aligned_cols=199 Identities=25% Similarity=0.386 Sum_probs=171.3
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC----CCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCce
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~ 302 (552)
..++|++.+.||+|+||+||+|+.+ +++.||+|.+.... ...++.+|++++..+ +||||+++++++...+..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 3578999999999999999999853 46789999986543 245678999999988 699999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC-CceEEcccccceecC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-YEAVVGDFGLAKLLD 381 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~ 381 (552)
++||||+++|+|.++++ .+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 96 ~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 99999999999999984 589999999999999999999999 99999999999999876 799999999998654
Q ss_pred CCCC---------------------------ceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCcccc
Q 008828 382 HCDS---------------------------HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEF 433 (552)
Q Consensus 382 ~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~ 433 (552)
.... ......+||+.|+|||++.+. .|+.++||||+||++|||+||+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 3221 112345699999999999875 589999999999999999999999975
Q ss_pred Cc
Q 008828 434 GK 435 (552)
Q Consensus 434 ~~ 435 (552)
+.
T Consensus 250 ~~ 251 (361)
T 4f9c_A 250 AS 251 (361)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.5e-47 Score=380.92 Aligned_cols=279 Identities=39% Similarity=0.678 Sum_probs=238.1
Q ss_pred cCHHHHHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC
Q 008828 220 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT 299 (552)
Q Consensus 220 ~~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~ 299 (552)
+.+.++...+++|+..+.||+|+||+||+|.+++++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 34445556778999999999999999999998889999999986543 33456789999999999999999999999999
Q ss_pred CceeEEEeeccCCChhhhhccC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccc
Q 008828 300 TERLLVYPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 375 (552)
Q Consensus 300 ~~~~lv~e~~~~g~L~~~l~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 375 (552)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999999644 2589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCC-CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhc
Q 008828 376 LAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 454 (552)
Q Consensus 376 ~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 454 (552)
+++...... ........||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .......|........
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNG 263 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTTT
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhccccc
Confidence 998654322 22233455899999999999999999999999999999999999999754432 2233445665555566
Q ss_pred chhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 455 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.+...+++.+........+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 6677777777777788899999999999999999999999999999986
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.1e-47 Score=406.27 Aligned_cols=251 Identities=24% Similarity=0.271 Sum_probs=202.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHH---HHHHhhccccccceeeeEeecCCcee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTE---VEMISLAVHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e---~~~l~~~~h~niv~l~~~~~~~~~~~ 303 (552)
++|++.++||+|+||+||+|+.+ +|+.||||++++... ......+.+| +.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57899999999999999999975 699999999964321 1122233344 55667778999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 304 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
+||||++||+|.+++...+.+++..+..|+.||+.||.|||++ +||||||||+|||++.+|++||+|||+|+.+...
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 9999999999999999888899999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
. ....+||+.|||||++.. ..|+.++||||+||++|||+||+.||........ ......... .
T Consensus 346 ~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~----~~i~~~i~~---------~ 409 (689)
T 3v5w_A 346 K---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTLT---------M 409 (689)
T ss_dssp C---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH----HHHHHHHHH---------C
T ss_pred C---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhhcC---------C
Confidence 2 345679999999999975 5799999999999999999999999974322111 111111110 0
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHH
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVRML 501 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L 501 (552)
...++...+.++.+|+.+||+.||.+|++ ++||.+|-
T Consensus 410 --~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 410 --AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred --CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 01123334577899999999999999998 67776543
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.8e-47 Score=407.89 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=208.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|++.+.||+|+||+||+|..+ +|+.||+|+++.... .....+.+|+.+|+.++|||||++++++.+....++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 57899999999999999999975 699999999975432 2345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC--CceEEcccccceecCCCCC
Q 008828 309 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY--YEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 309 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~~~~~~~~~~ 385 (552)
|++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 999999999864 45799999999999999999999999 99999999999999854 89999999999987643
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ..+..+.... ..+.
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-------~~~~~i~~~~-------~~~~ 376 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-------ETLRNVKSCD-------WNMD 376 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTTC-------CCCC
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-------HHHHHHHhCC-------CCCC
Confidence 3344567999999999999999999999999999999999999999743221 1111111110 0011
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.......+.++.+|+.+||+.||++|||+.|+++|
T Consensus 377 ~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11112234678999999999999999999999985
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-46 Score=375.11 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=201.3
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|.+.+.||+|+||+||+|.. .+|+.||||++...........+.+|+.+++.++||||+++++++......++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788999999999999999996 47899999999765544445578899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
|+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||++..........
T Consensus 89 ~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 89 YCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999999998877899999999999999999999999 99999999999999999999999999998665433333
Q ss_pred eecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 388 TTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
.....||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... ......+.... .
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-----------~ 227 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------MALYKKIMRGK-----------Y 227 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-----------C
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-----------C
Confidence 455679999999999988775 8999999999999999999999974321 11122221110 0
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+...+..+.+++.+||+.||++|||+.|++++
T Consensus 228 ~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 228 DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1122234678899999999999999999999864
No 23
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.8e-44 Score=355.11 Aligned_cols=280 Identities=40% Similarity=0.675 Sum_probs=230.7
Q ss_pred CccccCHHHHHHHhcCCCCC------CeeeeeCceEEEEEEECCCcEEEEEEeccCcc---CchHHHHHHHHHHHhhccc
Q 008828 216 NLKRFHFKELQSATSNFSSK------NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLAVH 286 (552)
Q Consensus 216 ~~~~~~~~e~~~~~~~~~~~------~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~~~h 286 (552)
....|++.++..++++|... +.||+|+||.||+|.. +++.||||++..... ......+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45778999999999999877 8999999999999987 588999999965322 2234578999999999999
Q ss_pred cccceeeeEeecCCceeEEEeeccCCChhhhhc---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee
Q 008828 287 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 363 (552)
Q Consensus 287 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 363 (552)
|||+++++++...+..++||||+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999999986 345699999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA 442 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~ 442 (552)
+.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|+|+||+.||....... .
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~ 242 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ---L 242 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS---B
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH---H
Confidence 99999999999999876543222 2334569999999998864 58899999999999999999999997543322 2
Q ss_pred hHHHHHHHhh-hcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 443 MLDWVKKIHQ-EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 443 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
...+...... ...+...+++.+ ...+...+..+.+++.+||+.||.+|||+.+++++|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 2233333222 222344444433 345677788999999999999999999999999999863
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2e-45 Score=375.19 Aligned_cols=254 Identities=28% Similarity=0.415 Sum_probs=209.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC--------CCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCC
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTT 300 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~ 300 (552)
++|.+.+.||+|+||+||+|... ++..||||+++..........+.+|+.++..+ +||||+++++++...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 56888899999999999999852 35679999997654444456799999999999 8999999999999999
Q ss_pred ceeEEEeeccCCChhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC
Q 008828 301 ERLLVYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD 364 (552)
Q Consensus 301 ~~~lv~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 364 (552)
..++||||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEEC
Confidence 999999999999999999753 2489999999999999999999999 999999999999999
Q ss_pred CCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccc
Q 008828 365 EYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGA 442 (552)
Q Consensus 365 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~ 442 (552)
.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... .
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~----~ 313 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----E 313 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----G
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----H
Confidence 9999999999999876543322 2233457889999999999999999999999999999999 99998643211 1
Q ss_pred hHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 443 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
. ....... .....+..++..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 314 ~---~~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 314 L---FKLLKEG----------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp H---HHHHHTT----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred H---HHHHhcC----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1 1111111 1112223345789999999999999999999999999986
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.2e-45 Score=364.38 Aligned_cols=257 Identities=28% Similarity=0.391 Sum_probs=202.8
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
....+|++.+.||+|+||+||+|.. +++.||||++...... .....+.+|+.++++++||||+++++++......++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788899999999999999987 4889999999754432 2335688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCC---CCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcCCCCCceeeCCCCceEEcccccceec
Q 008828 306 YPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGDFGLAKLL 380 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~---l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 380 (552)
|||+++|+|.+++..... +++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999986543 99999999999999999999998 8 999999999999999999999999999754
Q ss_pred CCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 381 DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 381 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
.... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .........
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-------~~~~~~~~~------- 254 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-------QVVAAVGFK------- 254 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHHS-------
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhc-------
Confidence 4321 2233456999999999999999999999999999999999999999743221 111111000
Q ss_pred cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 461 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 461 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
......+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 255 --~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~ 296 (309)
T 3p86_A 255 --CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296 (309)
T ss_dssp --CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011122333447799999999999999999999999999863
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-44 Score=357.67 Aligned_cols=251 Identities=19% Similarity=0.282 Sum_probs=208.1
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|.+.+.||+|+||+||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 35799999999999999999996 4689999999965433 334568899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
|+++|+|.+++... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++........ .
T Consensus 98 ~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 99999999999765 599999999999999999999999 999999999999999999999999999987654332 2
Q ss_pred eecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCc
Q 008828 388 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 467 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (552)
.....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ........... + ...
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~------~--~~~ 237 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGT------P--ELQ 237 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHCS------C--CCS
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCC------C--CCC
Confidence 34456999999999999999999999999999999999999999643221 11111111100 0 011
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 468 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 468 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.+...+..+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 122334678999999999999999999999874
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.1e-45 Score=367.29 Aligned_cols=255 Identities=26% Similarity=0.391 Sum_probs=208.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC----CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
.+|.+.+.||+|+||+||+|.+. .+..||||+++..........+.+|+.++..++||||+++++++......++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46778899999999999999974 35569999998655444556799999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 306 YPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999644 5799999999999999999999999 99999999999999999999999999998765433
Q ss_pred Cc--eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 385 SH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 385 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
.. ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .........
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-------~~~~~~~~~-------- 270 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-------DVISSVEEG-------- 270 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-------HHHHHHHTT--------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHHcC--------
Confidence 22 2223346788999999999999999999999999999999 99998643211 111111111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.....+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 271 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 271 --YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11112233457899999999999999999999999999863
No 28
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-44 Score=359.75 Aligned_cols=269 Identities=17% Similarity=0.211 Sum_probs=215.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCC--ceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--ERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~--~~~lv~ 306 (552)
++|.+.+.||+|+||+||+|... +++.||||+++..........+.+|+++++.++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888899999999999999976 589999999976554455667889999999999999999999988665 679999
Q ss_pred eeccCCChhhhhccCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee----CCCCceEEccccccee
Q 008828 307 PYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVVGDFGLAKL 379 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~~~ 379 (552)
||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997543 399999999999999999999999 99999999999999 7888899999999987
Q ss_pred cCCCCCceeecccccccccCchhhc--------cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHh
Q 008828 380 LDHCDSHVTTAVRGTVGHIAPEYLS--------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 451 (552)
Q Consensus 380 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 451 (552)
...... .....||..|+|||++. +..++.++|||||||++|||+||+.||.......... ..+....
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~ 240 (319)
T 4euu_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK---EVMYKII 240 (319)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH---HHHHHHH
T ss_pred cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH---HHHHHHh
Confidence 654332 23456999999999986 5678999999999999999999999997543322221 1122221
Q ss_pred hhcc---hhhhc-----------cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 008828 452 QEKK---LEMLV-----------DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 506 (552)
Q Consensus 452 ~~~~---~~~~~-----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 506 (552)
.... ...+. +..............+.+++.+||+.||++|||++|++++..+...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 1111 00000 0011224557788899999999999999999999999999997544
No 29
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.9e-45 Score=363.49 Aligned_cols=256 Identities=27% Similarity=0.411 Sum_probs=208.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|.+.+.||+|+||+||+|... +++.||+|.+.... ......+.+|+.++..++||||+++++++......++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 46788899999999999999975 68999999885432 23455789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 309 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 309 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999986 56799999999999999999999999 99999999999999999999999999998764332211
Q ss_pred -------------eecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhc
Q 008828 388 -------------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 454 (552)
Q Consensus 388 -------------~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 454 (552)
.....||+.|+|||.+.+..++.++|||||||++|||++|..|+.............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~---------- 235 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN---------- 235 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC----------
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh----------
Confidence 114569999999999999999999999999999999999999887533221111000
Q ss_pred chhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 455 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.....+.. .+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 236 -~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 236 -VRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp -HHHHHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -hhcccccc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 00001111 1122235689999999999999999999999998864
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.9e-45 Score=367.37 Aligned_cols=249 Identities=21% Similarity=0.298 Sum_probs=208.2
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
..+|.+.+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+.+++.++||||+++++++......++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788899999999999999997 57999999999654322 23456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-- 168 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC--
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC--
Confidence 9999999999998778899999999999999999999999 99999999999999999999999999998665332
Q ss_pred eeecccccccccCchhhccCCCC-CccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~-~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......||+.|+|||++.+..++ .++|||||||++|||+||+.||..... .......... ..
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~---------~~- 231 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-------KELRERVLRG---------KY- 231 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHC---------CC-
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhC---------CC-
Confidence 23456799999999999988875 799999999999999999999974321 1111111111 00
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+...+.++.+++.+||+.||.+|||++|++++
T Consensus 232 -~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 -RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1122234678999999999999999999999865
No 31
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.8e-45 Score=353.73 Aligned_cols=255 Identities=25% Similarity=0.396 Sum_probs=212.3
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
.++|.+.+.||+|+||.||+|..+++..||+|+++.... ...++.+|+.++..++||||+++++++......++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 356888899999999999999999888999999975432 245688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 309 MSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 309 ~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999999999754 4599999999999999999999999 99999999999999999999999999998776544333
Q ss_pred eecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 388 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
.....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .......... ..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~----------~~ 224 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-------EVVLKVSQGH----------RL 224 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTC----------CC
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-------HHHHHHHcCC----------CC
Confidence 444457788999999999899999999999999999999 99998643221 1111111110 01
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 505 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 505 (552)
..+...+..+.+++.+||+.||++|||+.|++++|+...
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 111223467899999999999999999999999999753
No 32
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.5e-45 Score=372.75 Aligned_cols=255 Identities=28% Similarity=0.408 Sum_probs=199.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC----CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
.+|.+.+.||+|+||.||+|+.. ++..||||+++..........|.+|+.++.+++||||+++++++......++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57899999999999999999864 57789999997654444456799999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 306 YPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999764 4799999999999999999999999 99999999999999999999999999998765432
Q ss_pred Cce--eecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 385 SHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 385 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||..... .........
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-------~~~~~~i~~--------- 265 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-------QDVIKAVDE--------- 265 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-------HHHHHHHHT---------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHc---------
Confidence 221 122235778999999999999999999999999999998 9999864321 111111111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
......+...+..+.+++.+||+.||++||++.|+++.|+..
T Consensus 266 -~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 266 -GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp -TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 111112223457899999999999999999999999999864
No 33
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.9e-45 Score=376.55 Aligned_cols=256 Identities=26% Similarity=0.390 Sum_probs=209.2
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
..++|.+.+.||+|+||.||+|.+. +++.||||+++..........|.+|+.+++.++||||+++++++......++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3457888899999999999999986 789999999976543333456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 307 PYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 307 e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999754 4699999999999999999999999 999999999999999999999999999986543211
Q ss_pred cee-ecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 386 HVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 386 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
... ....++..|+|||.+.+..++.++|||||||++|||+| |..||...... ........ .
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~----------~ 331 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEK----------G 331 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHT----------T
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHc----------C
Confidence 111 11235778999999999999999999999999999999 99888643211 11111111 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.....+..++..+.+++.+||+.||++|||+.++++.|+.
T Consensus 332 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 371 (377)
T 3cbl_A 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371 (377)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 1112233345789999999999999999999999999986
No 34
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.9e-45 Score=374.10 Aligned_cols=265 Identities=26% Similarity=0.391 Sum_probs=214.0
Q ss_pred cCHHHHHHHhcCCCCCCeeeeeCceEEEEEEE------CCCcEEEEEEeccCccCchHHHHHHHHHHHhhc-ccccccee
Q 008828 220 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRL 292 (552)
Q Consensus 220 ~~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l 292 (552)
+...+++...++|.+.+.||+|+||.||+|.+ .+++.||||+++..........+.+|+.++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455666678899999999999999999984 246799999997655444556799999999999 79999999
Q ss_pred eeEeecCCc-eeEEEeeccCCChhhhhccCCC------------------------------------------------
Q 008828 293 IGFCMTTTE-RLLVYPYMSNGSVASRLKAKPS------------------------------------------------ 323 (552)
Q Consensus 293 ~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------ 323 (552)
++++...+. .++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 8999999999999999975432
Q ss_pred ------------------CCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 324 ------------------LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 324 ------------------l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 89999999999999999999999 999999999999999999999999999986643332
Q ss_pred -ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 386 -HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 386 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
.......||+.|+|||++.+..++.++|||||||++|||+| |+.||....... ....... ..
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~-~~--------- 312 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLK-EG--------- 312 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHH-HT---------
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHH-cC---------
Confidence 23344568999999999999999999999999999999999 999996432211 1111111 11
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.....+...+.++.+++.+||+.||++|||+.|++++|+.
T Consensus 313 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 313 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352 (359)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 0111222234679999999999999999999999999986
No 35
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.7e-45 Score=364.43 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=204.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|++.+.||+|+||+||+|... +++.||||++...........+.+|+.+++.++||||+++++++......++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57888999999999999999976 78999999997554444445688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC-ce
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-HV 387 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~ 387 (552)
+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 99999999999888899999999999999999999999 999999999999999999999999999986543221 22
Q ss_pred eecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 388 TTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
.....||+.|+|||++.+..+ +.++|||||||++|||+||+.||........ ....|. ... ...
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~----~~~---------~~~ 228 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWK----EKK---------TYL 228 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH--HHHHHH----TTC---------TTS
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHHh----ccc---------ccC
Confidence 334569999999999988775 7899999999999999999999975332111 011111 000 000
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
......+..+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0011234678899999999999999999999865
No 36
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3e-45 Score=380.08 Aligned_cols=265 Identities=18% Similarity=0.195 Sum_probs=213.3
Q ss_pred HHHHHHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeec
Q 008828 222 FKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMT 298 (552)
Q Consensus 222 ~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~ 298 (552)
+.++....++|++.+.||+|+||+||+|+.+ +++.||+|+++.... ......+.+|+.++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4555566789999999999999999999976 478999999964221 1122348899999999999999999999999
Q ss_pred CCceeEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccc
Q 008828 299 TTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA 377 (552)
Q Consensus 299 ~~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 377 (552)
....++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 9999999999999999999986 56899999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCceeecccccccccCchhhc-----cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 378 KLLDHCDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 378 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
+..............||+.|+|||++. ...++.++|||||||++|||+||+.||....... ....+..
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-------~~~~i~~ 295 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-------TYGKIMN 295 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------HHHHHHT
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-------HHHhhhh
Confidence 877654444445567999999999997 4578999999999999999999999997533211 1111111
Q ss_pred hcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHHh
Q 008828 453 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSL--RPKMSEVVRMLE 502 (552)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~ 502 (552)
... ....+. .....+.++.+++.+||..+|++ ||+++|++++--
T Consensus 296 ~~~--~~~~p~----~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 296 HKE--RFQFPT----QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp HHH--HCCCCS----SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred ccc--cccCCc----ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 000 000011 11113467899999999999888 999999987543
No 37
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.3e-45 Score=355.04 Aligned_cols=252 Identities=28% Similarity=0.448 Sum_probs=209.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEeec
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 309 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 309 (552)
++|++.+.||+|+||+||+|...+++.||+|+++.... ...++.+|+.++.+++||||+++++++......++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc--CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 56888899999999999999998899999999975432 3457899999999999999999999999999999999999
Q ss_pred cCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCcee
Q 008828 310 SNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 388 (552)
Q Consensus 310 ~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 388 (552)
++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 99999999964 45699999999999999999999999 999999999999999999999999999986643322223
Q ss_pred ecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccccccCc
Q 008828 389 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 467 (552)
Q Consensus 389 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (552)
....+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||..... .......... ....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-------~~~~~~~~~~----------~~~~ 227 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTG----------FRLY 227 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTT----------CCCC
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-------HHHHHHHhcC----------ccCC
Confidence 33457788999999999999999999999999999999 8999864322 1111111111 1111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 468 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 468 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 122234779999999999999999999999999986
No 38
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.9e-44 Score=364.51 Aligned_cols=254 Identities=22% Similarity=0.246 Sum_probs=208.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-----hHHHHHHHHHHHhhccccccceeeeEeecCCce
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~ 302 (552)
.++|.+.+.||+|+||+||+|..+ +|+.||+|+++...... ....+.+|+.++..++||||+++++++......
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 357888999999999999999976 68999999997543321 245789999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC----ceEEcccccce
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAK 378 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~~~ 378 (552)
++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999999998888899999999999999999999999 999999999999998877 79999999998
Q ss_pred ecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhh
Q 008828 379 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 458 (552)
Q Consensus 379 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (552)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||..... ......+.... .
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-------~~~~~~i~~~~---~ 235 (361)
T 2yab_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANITAVS---Y 235 (361)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTC---C
T ss_pred EcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhcC---C
Confidence 765432 23445699999999999999999999999999999999999999974321 11111111110 0
Q ss_pred hccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 459 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
-.++... ...+..+.+++.+||+.||++|||+.|++++-
T Consensus 236 ~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp 274 (361)
T 2yab_A 236 DFDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (361)
T ss_dssp CCCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred CCCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0011111 12246789999999999999999999998643
No 39
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-44 Score=357.30 Aligned_cols=260 Identities=23% Similarity=0.279 Sum_probs=207.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc--hHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||.||+|... +++.||+|.+....... ....+.+|+.++..++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57888999999999999999965 68999999986543322 2356889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 9999999999998878899999999999999999999999 9999999999999999999999999999876543333
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .......... . +....
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~-~-----~~~~~ 234 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDS-V-----PNVTT 234 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHSSC-C-----CCHHH
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhhcc-C-----CCcch
Confidence 344556999999999999999999999999999999999999999753221 1111111110 0 00001
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhcCC
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRP-KMSEVVRMLEGDG 505 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~ 505 (552)
......+..+.+++.+||+.||++|| +++++.+.|+...
T Consensus 235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 11222347799999999999999999 8999999998743
No 40
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.6e-44 Score=362.97 Aligned_cols=251 Identities=23% Similarity=0.246 Sum_probs=209.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|++.+.||+|+||+||+|..+ +|+.||+|+++... .......+.+|+.++..++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 56888899999999999999976 68999999997532 2233456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++|+|..++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~ 160 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC-CC
Confidence 9999999999998877899999999999999999999999 9999999999999999999999999999854322 22
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... . .
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~---------~--~ 222 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------ERLFELILME---------E--I 222 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHC---------C--C
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-------HHHHHHHHcC---------C--C
Confidence 33456799999999999999999999999999999999999999974321 1111111111 0 1
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLE 502 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~ 502 (552)
.++...+.++.+++.+||+.||++|| +++|++++--
T Consensus 223 ~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 223 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 12223447789999999999999999 8999987543
No 41
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.2e-43 Score=353.19 Aligned_cols=262 Identities=19% Similarity=0.258 Sum_probs=213.1
Q ss_pred cccCHHHHHHHhcC----------CCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccc
Q 008828 218 KRFHFKELQSATSN----------FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 286 (552)
Q Consensus 218 ~~~~~~e~~~~~~~----------~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h 286 (552)
..++++++..+++. |...+.||+|+||.||+|... +|+.||||++..... .....+.+|+.+++.++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch-hHHHHHHHHHHHHHhCCC
Confidence 35677777777654 566678999999999999976 799999999975432 335568899999999999
Q ss_pred cccceeeeEeecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC
Q 008828 287 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY 366 (552)
Q Consensus 287 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 366 (552)
|||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.+
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC
Confidence 99999999999999999999999999999998754 699999999999999999999999 99999999999999999
Q ss_pred CceEEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHH
Q 008828 367 YEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDW 446 (552)
Q Consensus 367 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 446 (552)
+.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ...
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-------~~~ 249 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQA 249 (321)
T ss_dssp CCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHH
T ss_pred CcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHH
Confidence 9999999999987654322 23445699999999999999999999999999999999999999974321 111
Q ss_pred HHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 447 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
....... ..+.+. .....+..+.+++.+||+.||++|||+.|++++
T Consensus 250 ~~~~~~~------~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRDS------PPPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHS------SCCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhcC------CCCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111 111110 111234678999999999999999999999975
No 42
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8e-45 Score=363.90 Aligned_cols=266 Identities=27% Similarity=0.327 Sum_probs=206.0
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCc----eeE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE----RLL 304 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~----~~l 304 (552)
.++|++.+.||+|+||+||+|... ++.||||+++... .....+..|+.++..++||||+++++++..... .++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 357888999999999999999886 7999999996432 223356678888999999999999999987543 699
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC-------CCceEEcCCCCCceeeCCCCceEEcccccc
Q 008828 305 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-------DPKIIHRDVKAANILLDEYYEAVVGDFGLA 377 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 377 (552)
||||+++|+|.+++... .+++..+..++.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 100 v~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 99999999999999765 4999999999999999999999752 348999999999999999999999999999
Q ss_pred eecCCCCCc-eeecccccccccCchhhccC-----CCCCccchhHHHHHHHHHHhCCCccccCccccccc---------c
Q 008828 378 KLLDHCDSH-VTTAVRGTVGHIAPEYLSTG-----QSSEKTDVFGFGILLLELISGLRALEFGKTANQKG---------A 442 (552)
Q Consensus 378 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~---------~ 442 (552)
+........ ......||+.|+|||++.+. .++.++|||||||++|||+||+.||.......... .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 876543322 22335699999999999863 45678899999999999999999997543221110 0
Q ss_pred hHHHHHHHhhhcchhhhccccccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 443 MLDWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
...+....... ...+.+... .....+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 259 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 259 LEDMQEVVVHK-----KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp HHHHHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hhhhhhhhhcc-----cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111111110 011111111 123456779999999999999999999999999986
No 43
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.4e-44 Score=355.23 Aligned_cols=253 Identities=23% Similarity=0.368 Sum_probs=207.6
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
.++|.+.+.||+|+||+||+|.+.++..||+|+++.... ...++.+|+.++..++||||+++++++......++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 457888899999999999999999888999999975432 245788999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 309 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 309 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 999999999975 45799999999999999999999999 99999999999999999999999999998664332222
Q ss_pred eecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 388 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
.....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ......... ...
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-------~~~~~~~~~----------~~~ 240 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-------ETAEHIAQG----------LRL 240 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTT----------CCC
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-------HHHHHHhcc----------cCC
Confidence 233447788999999999999999999999999999998 99998743221 111111111 111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
..+...+..+.+++.+||+.||++|||+.|++++|++
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 277 (283)
T 3gen_A 241 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277 (283)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 1122234679999999999999999999999999986
No 44
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.5e-44 Score=358.77 Aligned_cols=257 Identities=27% Similarity=0.378 Sum_probs=211.3
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEE------CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCc
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~ 301 (552)
..++|.+.+.||+|+||.||+|.. .++..||||+++..........+.+|+.+++.++||||+++++++.....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 346788889999999999999986 24578999999765544445678999999999999999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCC------------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCC
Q 008828 302 RLLVYPYMSNGSVASRLKAKP------------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVK 357 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~------------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 357 (552)
.++||||+++|+|.+++.... .+++..++.++.||+.||.|||++ +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 999999999999999997543 389999999999999999999999 99999999
Q ss_pred CCceeeCCCCceEEcccccceecCCCCCce-eecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCc
Q 008828 358 AANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGK 435 (552)
Q Consensus 358 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~ 435 (552)
|+||+++.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999998765433322 223447889999999999999999999999999999999 999986432
Q ss_pred ccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 436 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.. ..... .... .....+...++.+.+++.+||+.||++|||+.|++++|+..
T Consensus 258 ~~----~~~~~---~~~~----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 258 PE----RLFNL---LKTG----------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp GG----GHHHH---HHTT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HH----HHHHH---hhcC----------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 21 11111 1110 11112233457899999999999999999999999999863
No 45
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-44 Score=368.70 Aligned_cols=256 Identities=29% Similarity=0.392 Sum_probs=210.7
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC--------CCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecC
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 299 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~ 299 (552)
.++|.+.+.||+|+||+||+|... ++..||||+++..........+.+|++++.++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357888899999999999999852 24579999997665444556789999999999 899999999999999
Q ss_pred CceeEEEeeccCCChhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee
Q 008828 300 TERLLVYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 363 (552)
Q Consensus 300 ~~~~lv~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 363 (552)
+..++||||+++|+|.+++... ..+++..++.++.||+.||.|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 9999999999999999999754 3599999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccccceecCCCCC-ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCccccccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 441 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~ 441 (552)
+.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||+| |..||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9999999999999987654332 22333457889999999999999999999999999999999 9999864321
Q ss_pred chHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 442 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
........... ....+...+.++.+++.+||+.||++|||+.|++++|+..
T Consensus 300 --~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 300 --EELFKLLKEGH----------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp --HHHHHHHHTTC----------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHHHcCC----------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111111 1111222347799999999999999999999999999864
No 46
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.6e-44 Score=361.02 Aligned_cols=254 Identities=23% Similarity=0.396 Sum_probs=200.6
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCc----EEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGT----VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++|++.+.||+|+||+||+|.+. +++ .||+|.++..........+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46888899999999999999964 344 468888865554455667999999999999999999999998754 789
Q ss_pred EEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 305 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
|+||+.+|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 9999999999999975 45799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 384 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 384 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
... ......+|..|+|||.+.+..++.++|||||||++|||+| |+.||....... .... +.
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~-------------~~ 233 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSI-------------LE 233 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHH-------------HH
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH----HHHH-------------HH
Confidence 322 2233447889999999999999999999999999999999 999997432211 1111 11
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.......+...+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 234 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111112233446799999999999999999999999999864
No 47
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.2e-44 Score=357.70 Aligned_cols=263 Identities=21% Similarity=0.253 Sum_probs=201.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|++.+.||+|+||+||+|...+++.||+|+++...... ....+.+|+.+++.++||||+++++++......++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36788899999999999999999889999999997543322 34568899999999999999999999999999999999
Q ss_pred eccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 308 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 308 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
|+++ +|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9985 77777764 44699999999999999999999999 999999999999999999999999999987653322
Q ss_pred eeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchh---h----
Q 008828 387 VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE---M---- 458 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---- 458 (552)
......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ ........ ...... .
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~-~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSIL-GTPNPREWPQVQEL 250 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHH-CCCCTTTSGGGTTS
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHH-CCCChHHhhhhhcc
Confidence 2334468999999999876 5689999999999999999999999975433211 11111111 000000 0
Q ss_pred ---------hccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 459 ---------LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 459 ---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
................++.+++.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000111234678999999999999999999999874
No 48
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-44 Score=362.25 Aligned_cols=259 Identities=26% Similarity=0.373 Sum_probs=209.1
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEE------CCCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecC
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 299 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~ 299 (552)
...++|.+.+.||+|+||.||+|.. .++..||||+++..........+.+|+.++.++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457888999999999999999996 245689999997654444456789999999999 899999999999999
Q ss_pred CceeEEEeeccCCChhhhhccCC-----------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCC
Q 008828 300 TERLLVYPYMSNGSVASRLKAKP-----------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 356 (552)
Q Consensus 300 ~~~~lv~e~~~~g~L~~~l~~~~-----------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl 356 (552)
+..++||||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 99999999999999999997542 379999999999999999999999 9999999
Q ss_pred CCCceeeCCCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccC
Q 008828 357 KAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFG 434 (552)
Q Consensus 357 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~ 434 (552)
||+|||++.++.+||+|||++......... ......||+.|+|||.+.+..++.++|||||||++|||+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999866543322 2334557889999999999999999999999999999998 99999743
Q ss_pred cccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 435 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.... .+...... ......+...+..+.+++.+||+.||.+|||+.|++++|+..
T Consensus 279 ~~~~-------~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 279 PVDA-------NFYKLIQN---------GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp CCSH-------HHHHHHHT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CcHH-------HHHHHHhc---------CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 2211 01111111 111112223357899999999999999999999999999874
No 49
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.5e-44 Score=353.13 Aligned_cols=255 Identities=22% Similarity=0.356 Sum_probs=197.1
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECC----CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
.++|++.+.||+|+||+||+|.... +..||+|.++..........+.+|+.++..++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4578888999999999999999642 45799999876544444567899999999999999999999984 567889
Q ss_pred EEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 305 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999754 3799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
.........+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... ... .......
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~---~~i~~~~-------- 234 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVI---GRIENGE-------- 234 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHH---HHHHTTC--------
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHH---HHHHcCC--------
Confidence 3333334457789999999999999999999999999999997 88898743221 111 1111110
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
....+...+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 235 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 235 --RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0112233457799999999999999999999999999873
No 50
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.4e-44 Score=379.06 Aligned_cols=258 Identities=23% Similarity=0.380 Sum_probs=212.0
Q ss_pred HHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 225 LQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 225 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++...++|.+.+.||+|+||+||+|.++++..||||+++... .....|.+|+.++++++||||+++++++. ....++
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 344556788889999999999999999888999999997543 23567999999999999999999999986 567899
Q ss_pred EEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 305 VYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
||||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999999999743 3689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
..........++..|+|||.+....++.++|||||||++|||+| |+.||..... .+....+...
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i~~~-------- 401 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------PEVIRALERG-------- 401 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHHHT--------
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcC--------
Confidence 22122223346789999999999999999999999999999999 9999964321 1111111111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 505 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 505 (552)
.....+..++..+.+++.+||+.||++|||+.+|++.|++..
T Consensus 402 --~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 402 --YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp --CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 111122334578999999999999999999999999999753
No 51
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-44 Score=358.01 Aligned_cols=254 Identities=20% Similarity=0.256 Sum_probs=208.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-----hHHHHHHHHHHHhhccccccceeeeEeecCCcee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~ 303 (552)
++|.+.+.||+|+||.||+|... +|+.||+|+++...... ....+.+|+.++..++||||+++++++......+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45888899999999999999976 68999999997543221 3457899999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC----ceEEccccccee
Q 008828 304 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAKL 379 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~~~~ 379 (552)
+||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999999998888899999999999999999999999 999999999999999887 899999999987
Q ss_pred cCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhh
Q 008828 380 LDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 459 (552)
Q Consensus 380 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (552)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...........
T Consensus 168 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~~~~~~----- 233 (326)
T 2y0a_A 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANVSAVN----- 233 (326)
T ss_dssp CCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHTC-----
T ss_pred CCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHHhcC-----
Confidence 65332 22345699999999999999999999999999999999999999964321 11111111100
Q ss_pred ccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 008828 460 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 502 (552)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 502 (552)
...........+..+.+++.+||+.||++|||+.|++++--
T Consensus 234 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 234 --YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp --CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred --CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00000001112467899999999999999999999998543
No 52
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7.7e-44 Score=364.70 Aligned_cols=252 Identities=22% Similarity=0.272 Sum_probs=202.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC--chHHHHHHHHHHHhhc-cccccceeeeEeecCCceeE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~l 304 (552)
.++|++.+.||+|+||+||+|+.+ +++.||+|+++..... .....+..|..++.++ +||||+++++++......++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357888999999999999999976 5789999999754322 2234578899998877 89999999999999999999
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 305 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
||||+++|+|..++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.... .
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~-~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-P 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-T
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeeccc-C
Confidence 999999999999998878899999999999999999999999 999999999999999999999999999985322 2
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccc-cchHHHHHHHhhhcchhhhcccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK-GAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....++....... .
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------~ 278 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------Q 278 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC--------C
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc--------c
Confidence 22344567999999999999999999999999999999999999999743221111 11111111111111 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKM 494 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 494 (552)
..++...+.++.+++.+||+.||++||++
T Consensus 279 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 --IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred --cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11233345778999999999999999996
No 53
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-44 Score=363.58 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=211.5
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC------CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCc
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~ 301 (552)
..++|.+.+.||+|+||.||+|... +++.||||+++..........+.+|+.++..++||||+++++++.....
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4567889999999999999999974 3488999999865544445679999999999999999999999999999
Q ss_pred eeEEEeeccCCChhhhhccC------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCC
Q 008828 302 RLLVYPYMSNGSVASRLKAK------------------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVK 357 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~------------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 357 (552)
.++||||+++|+|.+++... ..+++..++.++.||+.||.|||++ +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999998752 5699999999999999999999999 99999999
Q ss_pred CCceeeCCCCceEEcccccceecCCCCC-ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCc
Q 008828 358 AANILLDEYYEAVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGK 435 (552)
Q Consensus 358 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~ 435 (552)
|+|||++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||+| |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999976543221 12233458899999999999999999999999999999999 999986432
Q ss_pred ccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 008828 436 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 505 (552)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 505 (552)
. .......... .. ...+...+..+.+++.+||+.||++|||+.+++++|+...
T Consensus 282 ~-------~~~~~~~~~~-~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 282 H-------EEVIYYVRDG-NI---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp H-------HHHHHHHHTT-CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred h-------HHHHHHHhCC-Cc---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 1 1111111111 10 1122234467999999999999999999999999999753
No 54
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.7e-44 Score=379.49 Aligned_cols=258 Identities=25% Similarity=0.404 Sum_probs=213.8
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEECC-CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
...+|.+.+.||+|+||.||+|.++. +..||||+++.... ....|.+|+.++.+++||||+++++++......++||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 44668888999999999999999874 88999999975432 3567999999999999999999999999999999999
Q ss_pred eeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 307 PYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 307 e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 99999999999974 34699999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
........++..|+|||.+....++.++|||||||++|||+| |+.||...... ..... +. ..
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~---~~----------~~ 435 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYEL---LE----------KD 435 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHH---HH----------TT
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHH---HH----------cC
Confidence 222333446789999999999999999999999999999999 88888643221 11111 11 11
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCc
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 507 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 507 (552)
.....+..++..+.+++.+||+.||++|||+.++++.|+.....
T Consensus 436 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 436 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 11122334457899999999999999999999999999986433
No 55
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.7e-44 Score=365.26 Aligned_cols=252 Identities=26% Similarity=0.335 Sum_probs=203.3
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhc-cccccceeeeEeecCCcee
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~ 303 (552)
..++|++.+.||+|+||+||+|+.+ +++.||||+++... .......+..|..++..+ +||||+++++++......+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3468899999999999999999975 58999999997532 122344678899999987 6999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 304 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
+||||+++|+|..++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 9999999999999998878899999999999999999999999 9999999999999999999999999999854322
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....+... .
T Consensus 178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~---------~ 240 (353)
T 3txo_A 178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-------DLFEAILND---------E 240 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHC---------C
T ss_pred -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-------HHHHHHHcC---------C
Confidence 22344567999999999999999999999999999999999999999743221 111111111 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKM------SEVVRML 501 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~L 501 (552)
..++...+..+.+++.+||+.||++||++ .|++++-
T Consensus 241 --~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 241 --VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred --CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 11222344778999999999999999998 7776543
No 56
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-44 Score=356.38 Aligned_cols=252 Identities=19% Similarity=0.233 Sum_probs=206.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|.+.+.||+|+||+||+|... +++.||+|.++... .....+.+|+.++..++||||+++++++......++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 357888999999999999999976 58899999996432 234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC--CCceEEcccccceecCCCC
Q 008828 308 YMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--YYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 308 ~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~~~ 384 (552)
|+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 99999999999765 4799999999999999999999999 9999999999999997 7899999999998775432
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
......||+.|+|||++.+..++.++|||||||++|+|++|..||..... ............ ..+...
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~---~~~~~~ 226 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-------QQIIENIMNAEY---TFDEEA 226 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCC---CCCHHH
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-------HHHHHHHHcCCC---CCChhh
Confidence 33445699999999999988899999999999999999999999974322 111111111110 000000
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
. ...+.++.+++.+||+.||++|||+.|++++-
T Consensus 227 ~----~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 227 F----KEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp H----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred h----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 1 11246789999999999999999999999743
No 57
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.8e-44 Score=356.59 Aligned_cols=256 Identities=27% Similarity=0.388 Sum_probs=210.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE------CCCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCc
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~ 301 (552)
.++|.+.+.||+|+||.||+|.. .+++.||+|+++..........+.+|+.++.++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788889999999999999985 246799999997655444456799999999999 89999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCC------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee
Q 008828 302 RLLVYPYMSNGSVASRLKAKP------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 363 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 363 (552)
.++||||+++|+|.+++.... .+++..++.++.|++.||.|||++ +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 999999999999999997543 489999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCccccccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 441 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~ 441 (552)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 255 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--- 255 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---
Confidence 99999999999999876544332 2234457889999999999999999999999999999999 999986432211
Q ss_pred chHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 442 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
. ....... ......+...+..+.+++.+||+.||.+|||+.|++++|+.
T Consensus 256 ---~-~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 256 ---K-FYKMIKE---------GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp ---H-HHHHHHH---------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---H-HHHHhcc---------CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 0 1111111 01111122234779999999999999999999999999986
No 58
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=368.93 Aligned_cols=255 Identities=27% Similarity=0.381 Sum_probs=207.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC------CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCcee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~ 303 (552)
++|.+.+.||+|+||+||+|.+. ++..||||+++..........+.+|+.++..++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56788899999999999999953 467899999976544445567889999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhccC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC---ceEEcc
Q 008828 304 LVYPYMSNGSVASRLKAK-------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVVGD 373 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~-------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~D 373 (552)
+||||+++|+|.+++... ..+++..++.++.||+.||.|||++ +|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 999999999999999642 3589999999999999999999999 999999999999999554 599999
Q ss_pred cccceecCCCC-CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHh
Q 008828 374 FGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIH 451 (552)
Q Consensus 374 fg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 451 (552)
||+++...... ........||+.|+|||.+.+..++.++|||||||++|||+| |..||..... ........
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-------~~~~~~i~ 300 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLEFVT 300 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHH
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHH
Confidence 99997542211 122234558899999999999999999999999999999998 9999864321 11111111
Q ss_pred hhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 452 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
... ....+...+..+.+++.+||+.||++|||+.||+++|+..
T Consensus 301 ~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 301 SGG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCC----------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 111 1111223346789999999999999999999999999863
No 59
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.3e-43 Score=351.54 Aligned_cols=259 Identities=27% Similarity=0.385 Sum_probs=201.2
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhh--ccccccceeeeEeecC----Cce
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTT----TER 302 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--~~h~niv~l~~~~~~~----~~~ 302 (552)
.++|.+.+.||+|+||+||+|.. +++.||||++... ....+..|.+++.. ++||||+++++++... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 45788999999999999999998 5899999998643 23455667777665 7899999999986543 457
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCceEEcCCCCCceeeCCCCceEEccc
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEYYEAVVGDF 374 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 374 (552)
++||||+++|+|.++++.. .+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||+||
T Consensus 82 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEehhhccCCCHHHHHhhc-ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 8999999999999999654 6999999999999999999999 76 9999999999999999999999999
Q ss_pred ccceecCCCCCce---eecccccccccCchhhccC------CCCCccchhHHHHHHHHHHhC----------CCccccCc
Q 008828 375 GLAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISG----------LRALEFGK 435 (552)
Q Consensus 375 g~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gv~l~elltg----------~~p~~~~~ 435 (552)
|+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9998765433322 2234699999999999876 455799999999999999999 67765432
Q ss_pred ccccccchHHHHHHHhhhcchhhhcccccc-CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 436 TANQKGAMLDWVKKIHQEKKLEMLVDKDLK-NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
..... ............ ..+... .......+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 238 ~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 238 PNDPS--FEDMRKVVCVDQ-----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp CSSCC--HHHHHHHHTTSC-----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred CCCcc--hhhhhHHHhccC-----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 21111 111111111111 011111 11234567889999999999999999999999999985
No 60
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.8e-44 Score=369.90 Aligned_cols=266 Identities=20% Similarity=0.216 Sum_probs=213.2
Q ss_pred HHHHHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecC
Q 008828 223 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT 299 (552)
Q Consensus 223 ~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~ 299 (552)
.++....++|.+.+.||+|+||+||+|+.+ +++.||+|+++.... ......+.+|+.++..++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455688999999999999999999976 588999999964221 12233578999999999999999999999999
Q ss_pred CceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 300 TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 300 ~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
...++||||+++|+|.+++... .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 9999999999999999999764 599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeecccccccccCchhhccCC----CCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcc
Q 008828 380 LDHCDSHVTTAVRGTVGHIAPEYLSTGQ----SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 455 (552)
Q Consensus 380 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (552)
............+||+.|+|||++.+.. ++.++|||||||++|||+||+.||...... .....+.....
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~~~~~i~~~~~ 290 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------GTYSKIMNHKN 290 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTHHH
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-------hHHHHHHhccc
Confidence 7644433344667999999999998765 789999999999999999999999743221 11111111100
Q ss_pred hhhhccccccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHHhcCCC
Q 008828 456 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSL--RPKMSEVVRMLEGDGL 506 (552)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~~~~~ 506 (552)
. +..+ .....+.++.+++.+||+.+|.+ ||+++||+++---...
T Consensus 291 ~--~~~p-----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 291 S--LTFP-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp H--CCCC-----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred c--ccCC-----CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 0 0000 00122477899999999999998 9999999987654433
No 61
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-44 Score=354.77 Aligned_cols=247 Identities=27% Similarity=0.346 Sum_probs=207.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|++.+.||+|+||+||+|+.. +|+.||+|+++... .......+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888899999999999999975 68999999997532 1223456788999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 9999999999999888899999999999999999999999 9999999999999999999999999999876432
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... ..
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~---------~~-- 220 (318)
T 1fot_A 160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-------MKTYEKILNA---------EL-- 220 (318)
T ss_dssp -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHC---------CC--
T ss_pred -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhC---------CC--
Confidence 2345699999999999999999999999999999999999999974321 1111111111 10
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRML 501 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 501 (552)
.++...+.++.+++.+||+.||++|| +++|++++-
T Consensus 221 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp 260 (318)
T 1fot_A 221 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260 (318)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence 12223347789999999999999999 888888653
No 62
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7e-44 Score=356.24 Aligned_cols=263 Identities=23% Similarity=0.338 Sum_probs=190.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|++.+.||+|+||+||+|... +++.||+|+++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999965 6899999999765444444578899999999999999999999999999999999
Q ss_pred eccCCChhhhhccC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 308 YMSNGSVASRLKAK------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 308 ~~~~g~L~~~l~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
|++ |+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 5999888632 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhc---chh
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK---KLE 457 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 457 (552)
.... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ...+....... ...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ----LKLIFDIMGTPNESLWP 234 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCSCCTTTCG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCCChhHhh
Confidence 3222 22344689999999999764 689999999999999999999999975432111 11111100000 000
Q ss_pred h---h--ccccc------------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 458 M---L--VDKDL------------KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 458 ~---~--~~~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. . ..+.. ........+.++.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 0 00000 000011234679999999999999999999999864
No 63
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1e-43 Score=350.75 Aligned_cols=264 Identities=19% Similarity=0.255 Sum_probs=202.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|++.+.||+|+||+||+|... +++.||+|+++...... ....+.+|+.++++++||||+++++++......++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888899999999999999975 68999999997544332 34568899999999999999999999999999999999
Q ss_pred eccCCChhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 308 YMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 308 ~~~~g~L~~~l-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
|+++ ++.+.+ .....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence 9986 555544 4467899999999999999999999999 99999999999999999999999999998765322 2
Q ss_pred eeecccccccccCchhhccCC-CCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhh--cc---hhhhc
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--KK---LEMLV 460 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~ 460 (552)
......||..|+|||.+.+.. ++.++|||||||++|||+||..|+........ ............ .. .....
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHHhCCCChhhhhhhcccc
Confidence 234456899999999998766 89999999999999999999888754322111 011111111000 00 00000
Q ss_pred c---------ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 461 D---------KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 461 ~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
+ ...........+..+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000011122345778999999999999999999999864
No 64
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-43 Score=356.90 Aligned_cols=249 Identities=20% Similarity=0.309 Sum_probs=198.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCC--------
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT-------- 300 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~-------- 300 (552)
++|++.+.||+|+||.||+|+.. +++.||||+++..........+.+|+.++++++||||+++++++....
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 56888899999999999999986 799999999976554455667999999999999999999999986543
Q ss_pred -------------------------------------------------ceeEEEeeccCCChhhhhccCC---CCCHHH
Q 008828 301 -------------------------------------------------ERLLVYPYMSNGSVASRLKAKP---SLDWAT 328 (552)
Q Consensus 301 -------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~---~l~~~~ 328 (552)
..++||||+++|+|.+++.... ..++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 2789999999999999997654 356667
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC-----------ceeecccccccc
Q 008828 329 RKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-----------HVTTAVRGTVGH 397 (552)
Q Consensus 329 ~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~gt~~y 397 (552)
++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 899999999999999999 999999999999999999999999999987754321 122334699999
Q ss_pred cCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHH
Q 008828 398 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMV 477 (552)
Q Consensus 398 ~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 477 (552)
+|||.+.+..++.++|||||||++|||++|..|+... ........ .. ..+.........+.
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~---------~~~~~~~~---------~~-~~~~~~~~~~~~~~ 303 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER---------VRIITDVR---------NL-KFPLLFTQKYPQEH 303 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH---------HHHHHHHH---------TT-CCCHHHHHHCHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH---------HHHHHHhh---------cc-CCCcccccCChhHH
Confidence 9999999999999999999999999999987665310 00000000 00 00111223346779
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 008828 478 QVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 478 ~li~~cl~~dP~~RPs~~evl~~ 500 (552)
+++.+||+.||++|||+.|++++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHccCCCCcCCCHHHHhhc
Confidence 99999999999999999999874
No 65
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.6e-44 Score=361.98 Aligned_cols=261 Identities=25% Similarity=0.357 Sum_probs=211.4
Q ss_pred HHHHhcCCCCCCeeeeeCceEEEEEEECC------CcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEee
Q 008828 225 LQSATSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCM 297 (552)
Q Consensus 225 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~ 297 (552)
++...++|.+.+.||+|+||.||+|.... ...||+|.++..........+.+|+.++..+ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34455788999999999999999999642 2479999997655444556789999999999 8999999999999
Q ss_pred cCCceeEEEeeccCCChhhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee
Q 008828 298 TTTERLLVYPYMSNGSVASRLKA--------------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 363 (552)
Q Consensus 298 ~~~~~~lv~e~~~~g~L~~~l~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 363 (552)
..+..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999863 34689999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCccccccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 441 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~ 441 (552)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||.......
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 274 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--- 274 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---
Confidence 99999999999999866433322 2234457889999999999999999999999999999999 888886432211
Q ss_pred chHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 442 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
......... .....+...+..+.+++.+||+.||.+|||+.|++++|+..
T Consensus 275 ----~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 275 ----KFYKLVKDG---------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp ----HHHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----HHHHHHhcC---------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 111111111 11111222347789999999999999999999999999863
No 66
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.8e-44 Score=351.85 Aligned_cols=263 Identities=21% Similarity=0.302 Sum_probs=200.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|.+.+.||+|+||+||+|...+++.||+|+++..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468888999999999999999988999999999654322 2235688999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 309 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 309 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
+++ +|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence 985 89888875 36799999999999999999999999 99999999999999999999999999998664322 12
Q ss_pred eecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhh--cc---hhh--h
Q 008828 388 TTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--KK---LEM--L 459 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~--~ 459 (552)
.....||+.|+|||.+.+. .++.++|||||||++|||+||+.||........ ........... .. ... .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHHCCCChhhchhhhcccc
Confidence 2334589999999999764 589999999999999999999999975332111 11111110000 00 000 0
Q ss_pred ccccc-------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 460 VDKDL-------KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 460 ~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.++.. ...+....+..+.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 001112234778999999999999999999999864
No 67
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-44 Score=359.52 Aligned_cols=247 Identities=20% Similarity=0.285 Sum_probs=204.6
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.+|.+.+.||+|+||+||+|.. .+++.||+|++.... .......+.+|+.+++.++||||+++++++......++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5688899999999999999997 478999999986432 1122346889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+ +|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162 (336)
T ss_dssp CCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--
T ss_pred ECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--
Confidence 999 689999998777899999999999999999999999 99999999999999999999999999998665322
Q ss_pred eeecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......||+.|+|||.+.+..+ +.++|||||||++|+|++|+.||.......... .+... .
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----------------~i~~~--~ 224 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----------------KVNSC--V 224 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----------------CCCSS--C
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----------------HHHcC--C
Confidence 2334569999999999988776 789999999999999999999997533221110 00000 0
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+...+..+.+++.+||+.||.+|||+.|++++
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 11222334778999999999999999999999864
No 68
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.3e-43 Score=360.40 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=207.4
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|.+.+.||+|+||.||+|..+ +++.||+|+++..... .....+.+|+.++..++||||+++++++......++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457889999999999999999975 6899999999754332 23456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC---CceEEcccccceecCCC
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY---YEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~~~~~ 383 (552)
||+++|+|.+.+.....+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++......
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999999998888899999999999999999999999 99999999999999865 45999999999876532
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ......+.... . +
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-------~~~~~~i~~~~-~----~-- 248 (362)
T 2bdw_A 185 E--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYAQIKAGA-Y----D-- 248 (362)
T ss_dssp C--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-C----C--
T ss_pred c--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCC-C----C--
Confidence 2 23345699999999999999999999999999999999999999974321 11111111110 0 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.........+.++.+++.+||+.||++|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000111234678999999999999999999999865
No 69
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=350.91 Aligned_cols=250 Identities=25% Similarity=0.341 Sum_probs=197.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-------------------------chHHHHHHHHHHHhh
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-------------------------GGEIQFQTEVEMISL 283 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~~~~~e~~~l~~ 283 (552)
++|.+.+.||+|+||.||+|... +++.||||+++..... .....+.+|+.+++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57888999999999999999965 6889999999654321 113468899999999
Q ss_pred ccccccceeeeEeec--CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCce
Q 008828 284 AVHRNLLRLIGFCMT--TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANI 361 (552)
Q Consensus 284 ~~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Ni 361 (552)
++||||+++++++.. ....++||||+++|+|.+++.. ..+++..+..++.||+.||.|||++ +|+||||||+||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 999999999999986 5678999999999999887654 4699999999999999999999999 999999999999
Q ss_pred eeCCCCceEEcccccceecCCCCCceeecccccccccCchhhccCC---CCCccchhHHHHHHHHHHhCCCccccCcccc
Q 008828 362 LLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELISGLRALEFGKTAN 438 (552)
Q Consensus 362 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~ 438 (552)
|++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-- 245 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI-- 245 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred EECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--
Confidence 999999999999999987654322 234456999999999998765 37889999999999999999999964321
Q ss_pred cccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 439 QKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+....... . .........+..+.+++.+||+.||++|||+.|++++
T Consensus 246 -----~~~~~~~~~~-~--------~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 -----MCLHSKIKSQ-A--------LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -----HHHHHHHHHC-C--------CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -----HHHHHHHhcc-c--------CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1111111111 0 0000011234678999999999999999999999753
No 70
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.8e-44 Score=363.05 Aligned_cols=250 Identities=24% Similarity=0.295 Sum_probs=206.3
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||.||+|... +++.||+|+++... .......+.+|+.++..++||||+++++++......++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888899999999999999975 58899999996432 2233457889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+.+|+|..++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~ 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--T 169 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--C
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC--C
Confidence 9999999999999888899999999999999999999999 9999999999999999999999999999876532 2
Q ss_pred eeecccccccccCchhhcc---CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 387 VTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
......||+.|+|||++.. ..++.++|||||||++|||+||+.||....... ...........
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~----~~~~~~~~~~~---------- 235 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS----SKEIVHTFETT---------- 235 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC----HHHHHHHHHHC----------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc----HHHHHHHHhhc----------
Confidence 3345679999999999974 458999999999999999999999997432211 11111111100
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPK-MSEVVR 499 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 499 (552)
...++...+..+.+++.+||+.||++||+ +.++.+
T Consensus 236 -~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 -VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 01122334578999999999999999998 777765
No 71
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.1e-43 Score=348.90 Aligned_cols=258 Identities=27% Similarity=0.399 Sum_probs=201.0
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|.+.+.||+|+||+||+|... ..+|+|+++..... .....+.+|+.++.+++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 367888999999999999999865 36899988754332 23457899999999999999999999875 456899999
Q ss_pred eccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC-CC
Q 008828 308 YMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC-DS 385 (552)
Q Consensus 308 ~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~-~~ 385 (552)
|+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 999999999996 456799999999999999999999999 9999999999999999999999999999865432 22
Q ss_pred ceeecccccccccCchhhc---cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 386 HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
.......||+.|+|||.+. +..++.++|||||||++|||+||+.||....... .......... ..+
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~-----~~~ 257 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGY-----ASP 257 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHHTC-----CCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH------HHHHHHhcCC-----CCc
Confidence 2333456999999999986 5678999999999999999999999997432211 1111111110 111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.+ ......++..+.+++.+||+.+|++||++.|++++|+..
T Consensus 258 ~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l 298 (307)
T 3lb7_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp CS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred ch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence 11 111223347799999999999999999999999998863
No 72
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=6.6e-44 Score=373.62 Aligned_cols=256 Identities=27% Similarity=0.371 Sum_probs=205.8
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
...++|.+.+.||+|+||.||+|.++++..||||+++.... ....|.+|+.++++++||||+++++++.. ...++||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 34567888899999999999999998888899999975432 34578999999999999999999999876 6789999
Q ss_pred eeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 307 PYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 307 e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 99999999999974 35699999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
........++..|+|||.+....++.++|||||||++|||+| |+.||..... .+........
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i~~~---------- 397 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERG---------- 397 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTT----------
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcC----------
Confidence 233334457889999999999999999999999999999999 8999864321 1111111111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 505 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 505 (552)
.....+..++..+.+++.+||+.||++|||+.++++.|+...
T Consensus 398 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 398 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 111223344578999999999999999999999999999753
No 73
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=367.59 Aligned_cols=255 Identities=19% Similarity=0.243 Sum_probs=207.2
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
..++|.+.+.||+|+||+||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3467889999999999999999864 6899999999754322 2345688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC---CCCceEEcccccceecCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~~~~ 382 (552)
|||+++|+|.+.+.....+++..+..++.||+.||.|||++ +|+||||||+|||++ .++.+||+|||++.....
T Consensus 89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999999999998888899999999999999999999999 999999999999998 568899999999987654
Q ss_pred CCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+.... . +
T Consensus 166 ~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-------~~~~~~i~~~~-~----~- 231 (444)
T 3soa_A 166 EQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-------HRLYQQIKAGA-Y----D- 231 (444)
T ss_dssp TCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTC-C----C-
T ss_pred CCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHhCC-C----C-
Confidence 322 23345699999999999999999999999999999999999999964321 11111111110 0 0
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.........+.++.+++.+||+.||++|||+.|++++
T Consensus 232 -~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 -FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0011112234678999999999999999999999874
No 74
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.7e-43 Score=345.17 Aligned_cols=253 Identities=25% Similarity=0.396 Sum_probs=195.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC---chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI---GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|++.+.||+|+||.||+|.+. ++.||||+++..... .....+.+|+.+++.++||||+++++++......++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 56888899999999999999976 889999998754322 22456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC--------CCceEEcccccce
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--------YYEAVVGDFGLAK 378 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Dfg~~~ 378 (552)
||+++++|.+++.. ..+++..+..++.|++.||.|||++...+|+||||||+||+++. ++.+||+|||+++
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 86 EFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp ECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred EcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 99999999999864 46999999999999999999999981112999999999999986 7789999999998
Q ss_pred ecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhh
Q 008828 379 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 458 (552)
Q Consensus 379 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (552)
...... .....||+.|+|||.+.+..++.++||||||+++|+|+||+.||...... ......
T Consensus 165 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~-------- 226 (271)
T 3dtc_A 165 EWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-------AVAYGV-------- 226 (271)
T ss_dssp --------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHH--------
T ss_pred cccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHhh--------
Confidence 654322 22346899999999999999999999999999999999999999743211 001111
Q ss_pred hccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 459 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.........+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 227 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 227 -AMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp -HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred -hcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 11111112233345789999999999999999999999999975
No 75
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.8e-43 Score=370.06 Aligned_cols=248 Identities=28% Similarity=0.388 Sum_probs=204.9
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCC-ceeEEE
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT-ERLLVY 306 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~-~~~lv~ 306 (552)
..++|.+.+.||+|+||.||+|.+. ++.||||+++... ....|.+|+.++++++||||+++++++.... ..++||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 3467888899999999999999986 7899999997643 3457899999999999999999999987765 789999
Q ss_pred eeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 307 PYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 9999999999997543 479999999999999999999999 9999999999999999999999999999854322
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
.....++..|+|||.+.+..++.++|||||||++|||+| |+.||...... .. ...+...
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~---~~~i~~~---------- 402 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DV---VPRVEKG---------- 402 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT----TH---HHHHHTT----------
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HH---HHHHHcC----------
Confidence 122347889999999999999999999999999999999 99998743221 11 1111111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.....+..++..+.+++.+||+.||++|||+.++++.|+.
T Consensus 403 ~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 403 YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1112233445789999999999999999999999999986
No 76
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7e-44 Score=349.51 Aligned_cols=253 Identities=28% Similarity=0.448 Sum_probs=208.7
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
..++|.+.+.||+|+||.||+|...++..||+|.++.... ....+.+|++++..++||||+++++++. .+..++|||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc--cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 3467888999999999999999998888999999975432 3457899999999999999999999986 456899999
Q ss_pred eccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 308 YMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999999997543 699999999999999999999999 999999999999999999999999999987764333
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
.......++..|+|||.+.+..++.++||||||+++|||+| |+.||..... .......... .
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~----------~ 227 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------PEVIQNLERG----------Y 227 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTT----------C
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-------HHHHHHHhcc----------c
Confidence 33334457789999999998999999999999999999999 8888864321 1111111111 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
....+...+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 111122334789999999999999999999999999986
No 77
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.4e-44 Score=358.38 Aligned_cols=255 Identities=23% Similarity=0.382 Sum_probs=203.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcE----EEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTV----VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++|.+.+.||+|+||+||+|.+. +++. ||+|.+...........+.+|+.++..++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46788899999999999999964 3443 88888865443334456778999999999999999999986 566889
Q ss_pred EEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 305 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
||||+.+|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999764 5799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 384 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 384 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
... ......||..|+|||.+.+..++.++|||||||++|||+| |+.||...... .... .....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~---~~~~~-------- 233 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPD---LLEKG-------- 233 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHH---HHHTT--------
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHH---HHHcC--------
Confidence 322 2344568889999999999999999999999999999999 99999753221 1111 11111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 505 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 505 (552)
.....+...+..+.+++.+||+.||++|||+.|++++|+...
T Consensus 234 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 234 --ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp --CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred --CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 011112223356889999999999999999999999998753
No 78
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.7e-43 Score=355.57 Aligned_cols=251 Identities=23% Similarity=0.273 Sum_probs=202.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc--hHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv 305 (552)
++|.+.+.||+|+||.||+|+.+ +++.||+|+++...... ....+.+|..++.++ +||||+++++++......++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46888899999999999999976 58899999997654322 234578899999887 899999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|||+++|+|.+++.....+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~- 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC-
Confidence 99999999999998777899999999999999999999999 99999999999999999999999999998543222
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccc-cchHHHHHHHhhhcchhhhccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK-GAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+....... .
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--------~- 235 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------Q- 235 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--------C-
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--------C-
Confidence 2334567999999999999999999999999999999999999999743221111 01111111111111 1
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKM 494 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 494 (552)
..++...+..+.+++.+||+.||++||++
T Consensus 236 -~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 236 -IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11223345778999999999999999996
No 79
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.7e-43 Score=356.12 Aligned_cols=256 Identities=27% Similarity=0.408 Sum_probs=209.6
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC--------CCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecC
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 299 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~ 299 (552)
.++|.+.+.||+|+||+||+|... ++..||+|+++..........+.+|+.++.++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467888999999999999999863 46789999997655444456789999999999 899999999999999
Q ss_pred CceeEEEeeccCCChhhhhccCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee
Q 008828 300 TERLLVYPYMSNGSVASRLKAKP----------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 363 (552)
Q Consensus 300 ~~~~lv~e~~~~g~L~~~l~~~~----------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 363 (552)
+..++||||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 99999999999999999997543 389999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCccccccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 441 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~ 441 (552)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-----
Confidence 99999999999999876543322 1223347889999999999999999999999999999999 9999864321
Q ss_pred chHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 442 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
........... ....+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 266 --~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 266 --EELFKLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp --HHHHHHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHHhcCC----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11111111110 1112223346799999999999999999999999999864
No 80
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.1e-43 Score=351.01 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=203.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-----CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC--Cce
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TER 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~--~~~ 302 (552)
++|++.+.||+|+||+||+|++ .+++.||||+++... ......+.+|+.++..++||||+++++++... ...
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 5688889999999999999984 258899999997543 23345789999999999999999999998653 558
Q ss_pred eEEEeeccCCChhhhhccCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 303 LLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 99999999999999997643 599999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc--eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhh------
Q 008828 382 HCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE------ 453 (552)
Q Consensus 382 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 453 (552)
..... ......++..|+|||.+.+..++.++||||||+++|||+||..|+...... +.......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~ 237 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--------FMRMIGNDKQGQMI 237 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH--------HHHHHCTTCCTHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH--------HHhhhcCccccchh
Confidence 43221 223344778899999999999999999999999999999999888642210 00000000
Q ss_pred -cchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 454 -KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 454 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
...............+..++.++.+++.+||+.||++|||+.|+++.|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 238 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 00011111111122233445789999999999999999999999999986
No 81
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.7e-43 Score=357.62 Aligned_cols=248 Identities=20% Similarity=0.237 Sum_probs=208.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|++.+.||+|+||.||+|+.. +|+.||+|+++... .......+.+|+.++..++||||+++++++......++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 56888899999999999999975 68999999996532 1233456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC---
Confidence 9999999999998877899999999999999999999999 9999999999999999999999999999876532
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... . .
T Consensus 195 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~---------~--~ 255 (350)
T 1rdq_E 195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-------IQIYEKIVSG---------K--V 255 (350)
T ss_dssp -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHC---------C--C
T ss_pred -cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-------HHHHHHHHcC---------C--C
Confidence 2345699999999999999999999999999999999999999974321 1111111111 0 0
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHh
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVRMLE 502 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~ 502 (552)
.++...+..+.+++.+||+.||++||+ ++|++++--
T Consensus 256 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 122233477899999999999999998 888876543
No 82
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.3e-44 Score=346.14 Aligned_cols=252 Identities=28% Similarity=0.430 Sum_probs=209.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEeec
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 309 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 309 (552)
++|.+.+.||+|+||.||+|...+++.||+|+++.... ....+.+|+.++..++||||+++++++......++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 56788899999999999999998889999999976433 2457899999999999999999999999999999999999
Q ss_pred cCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCcee
Q 008828 310 SNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 388 (552)
Q Consensus 310 ~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 388 (552)
++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999754 5689999999999999999999999 999999999999999999999999999986543222222
Q ss_pred ecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccccccCc
Q 008828 389 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 467 (552)
Q Consensus 389 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (552)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||..... ........... ...
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~i~~~~----------~~~ 225 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTGF----------RLY 225 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTC----------CCC
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-------HHHHHHHhcCC----------cCC
Confidence 33447788999999999999999999999999999999 8988864321 11111111110 011
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 468 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 468 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 122234778999999999999999999999999986
No 83
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-44 Score=369.59 Aligned_cols=265 Identities=22% Similarity=0.223 Sum_probs=210.7
Q ss_pred CHHHHHHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEee
Q 008828 221 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCM 297 (552)
Q Consensus 221 ~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~ 297 (552)
.+++.....++|++.+.||+|+||+||+|+.+ +|+.||+|++++... ......+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555556788999999999999999999975 689999999964321 112335789999999999999999999999
Q ss_pred cCCceeEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEccccc
Q 008828 298 TTTERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 376 (552)
Q Consensus 298 ~~~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 376 (552)
+.+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++++||+|||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999999764 4799999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeecccccccccCchhhc-------cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHH
Q 008828 377 AKLLDHCDSHVTTAVRGTVGHIAPEYLS-------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 449 (552)
Q Consensus 377 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 449 (552)
++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||...... .....
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-------~~~~~ 281 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-------ETYGK 281 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-------HHHHH
Confidence 9877654433344567999999999997 356899999999999999999999999753321 11111
Q ss_pred HhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHHHh
Q 008828 450 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLR---PKMSEVVRMLE 502 (552)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~L~ 502 (552)
+..... ....+ ......+.++.+++.+||. +|++| |+++|++++--
T Consensus 282 i~~~~~--~~~~p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 282 IVHYKE--HLSLP----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp HHTHHH--HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred HHhccc--CcCCC----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence 111000 00001 1112234789999999999 99998 58999986543
No 84
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=9e-44 Score=355.65 Aligned_cols=266 Identities=25% Similarity=0.353 Sum_probs=209.0
Q ss_pred CCCCCeeeeeCceEEEEEEEC-----CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC--CceeE
Q 008828 232 FSSKNLVGKGGFGNVYKGYLQ-----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TERLL 304 (552)
Q Consensus 232 ~~~~~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~--~~~~l 304 (552)
|.+.+.||+|+||+||++.+. +++.||||+++..........+.+|+.+++.++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998753 58899999998654444456789999999999999999999999874 56789
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 305 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
||||+++|+|.+++.... +++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 113 v~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 999999999999997654 99999999999999999999999 99999999999999999999999999998876543
Q ss_pred Cc--eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 385 SH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 385 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
.. ......+|..|+|||.+.+..++.++||||||+++|||+||+.||......... ...+................
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE--LIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH--HHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh--hhcccccchhHHHHHHHHhc
Confidence 32 223345788899999999999999999999999999999999998742211000 00000000000111112222
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
......+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 22222334455789999999999999999999999999986
No 85
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=358.94 Aligned_cols=253 Identities=22% Similarity=0.294 Sum_probs=200.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccc--cccceeeeEeecCCceeEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVH--RNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h--~niv~l~~~~~~~~~~~lv 305 (552)
.++|.+.+.||+|+||.||+|...+++.||||++....... ....+.+|+.++..++| |||+++++++......++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45688899999999999999999889999999997543322 33568899999999976 9999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|| +.+|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 99 55789999999888999999999999999999999999 999999999999997 67899999999987654322
Q ss_pred c-eeecccccccccCchhhcc-----------CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhh
Q 008828 386 H-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 453 (552)
Q Consensus 386 ~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 453 (552)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~------- 229 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISK------- 229 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHH-------
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh------HHHH-------
Confidence 2 2334569999999999865 6789999999999999999999999963211 0111
Q ss_pred cchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 454 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
...+.++.....++...+..+.+++.+||+.||++|||+.|++++.
T Consensus 230 --~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 230 --LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp --HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --HHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1112222222223333346789999999999999999999998753
No 86
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.7e-44 Score=360.67 Aligned_cols=251 Identities=25% Similarity=0.326 Sum_probs=206.4
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhc-cccccceeeeEeecCCce
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~ 302 (552)
...++|.+.+.||+|+||.||+|+.+ +++.||+|+++.... ......+..|..++..+ +||||+++++++......
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45578999999999999999999976 589999999975421 22345677899998876 899999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
++||||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999998877899999999999999999999999 999999999999999999999999999985432
Q ss_pred CCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 171 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-------- 234 (345)
T 1xjd_A 171 GD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-------EELFHSIRMDN-------- 234 (345)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC--------
T ss_pred CC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHhCC--------
Confidence 22 223456799999999999999999999999999999999999999974321 11111111110
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS-EVVR 499 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 499 (552)
..++...+.++.+++.+||+.||++||++. |+.+
T Consensus 235 ---~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 235 ---PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ---CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ---CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 112223347789999999999999999997 6654
No 87
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.4e-43 Score=347.82 Aligned_cols=255 Identities=22% Similarity=0.374 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECC----CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
.++|.+.+.||+|+||+||+|.+.+ +..||+|.++..........+.+|+.+++.++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678888999999999999998643 346999999765444456679999999999999999999999765 45789
Q ss_pred EEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 305 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999975 44699999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
.........+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... ... ......
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~----~~~---~~~~~~-------- 231 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIG---VLEKGD-------- 231 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG----HHH---HHHHTC--------
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH----HHH---HHhcCC--------
Confidence 3333344557889999999999999999999999999999998 999997432211 111 111110
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
....+...++.+.+++.+||+.||++|||+.|++++|+..
T Consensus 232 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 232 --RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 0111222346799999999999999999999999999864
No 88
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.3e-44 Score=355.00 Aligned_cols=265 Identities=26% Similarity=0.379 Sum_probs=213.5
Q ss_pred CHHHHHHHhcCCCCCCeeeeeCceEEEEEEE------CCCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceee
Q 008828 221 HFKELQSATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLI 293 (552)
Q Consensus 221 ~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~ 293 (552)
...++....++|.+.+.||+|+||+||+|.. .+++.||||+++..........+.+|+.++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444455567899999999999999999984 246899999997655444456789999999999 799999999
Q ss_pred eEeecCC-ceeEEEeeccCCChhhhhccCCC----------------CCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCC
Q 008828 294 GFCMTTT-ERLLVYPYMSNGSVASRLKAKPS----------------LDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 356 (552)
Q Consensus 294 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl 356 (552)
+++...+ ..++||||+++|+|.+++..... +++..+..++.|++.||.|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 9988755 48999999999999999976543 89999999999999999999999 9999999
Q ss_pred CCCceeeCCCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccC
Q 008828 357 KAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFG 434 (552)
Q Consensus 357 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~ 434 (552)
||+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+| |..||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999876543332 2334558899999999999999999999999999999998 99998643
Q ss_pred cccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 435 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.... .......... ....+...+..+.+++.+||+.||.+|||+.|++++|+..
T Consensus 255 ~~~~------~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 255 KIDE------EFCRRLKEGT----------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CCSH------HHHHHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred chhH------HHHHHhccCc----------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2211 1111111110 0111222346789999999999999999999999999863
No 89
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-43 Score=360.36 Aligned_cols=253 Identities=23% Similarity=0.254 Sum_probs=196.6
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|.+.+.||+|+||+||+|+.. +++.||||++...... ...+.+|+.+++.++||||+++++++......++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 357888999999999999999976 6899999999754432 3467899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc--eEEcccccceecCCCCC
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--AVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~~~~~~~ 385 (552)
|+++|+|.+++...+.+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+|||+++.....
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 999999999998777899999999999999999999999 9999999999999987765 999999999743321
Q ss_pred ceeecccccccccCchhhccCCCCCc-cchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
.......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||........ ....+...... ..
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~~~~~~~~~---------~~ 239 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD---YRKTIQRILSV---------KY 239 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC---HHHHHHHHHTT---------CC
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH---HHHHHHHHhcC---------CC
Confidence 22234569999999999988887665 8999999999999999999975332211 11111111111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
........+..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 240 SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000011123678999999999999999999999875
No 90
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.8e-43 Score=352.93 Aligned_cols=251 Identities=22% Similarity=0.274 Sum_probs=184.4
Q ss_pred CCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-ccccceeeeEeecCCceeEEEeeccCC
Q 008828 235 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLVYPYMSNG 312 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~niv~l~~~~~~~~~~~lv~e~~~~g 312 (552)
.+.||+|+||+||+|... +++.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999975 6899999999643 2456788999999997 999999999999999999999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC---ceEEcccccceecCCCCCceee
Q 008828 313 SVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVVGDFGLAKLLDHCDSHVTT 389 (552)
Q Consensus 313 ~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~ 389 (552)
+|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+||+|||+++...... ....
T Consensus 92 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~ 167 (325)
T 3kn6_A 92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLK 167 (325)
T ss_dssp BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccc
Confidence 9999999888999999999999999999999999 999999999999998665 89999999998765432 2233
Q ss_pred cccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcCC
Q 008828 390 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD 469 (552)
Q Consensus 390 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (552)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||........................ .......
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~ 240 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF-------SFEGEAW 240 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC-------CCCSHHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC-------CCCcccc
Confidence 456899999999999999999999999999999999999999754432222222222222221110 0001111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 470 RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 470 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+.++.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 2235789999999999999999999999854
No 91
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.9e-44 Score=351.62 Aligned_cols=256 Identities=26% Similarity=0.409 Sum_probs=213.8
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
...++|.+.+.||+|+||+||+|.+. ++..||+|.++... .....+.+|+.+++.++||||+++++++......++|
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 34567888899999999999999976 48899999997532 3456789999999999999999999999999999999
Q ss_pred EeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 306 YPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 999999999999975 34599999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
.........+|+.|+|||.+.+..++.++||||||+++|+|++ |..||....... ... ... .
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~----~~~---~~~----------~ 227 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYE---LLE----------K 227 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HHH---HHH----------T
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHH---HHh----------c
Confidence 4444455567889999999999999999999999999999999 888886432211 111 111 1
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
......+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 228 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 111122233447899999999999999999999999999863
No 92
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.1e-43 Score=350.63 Aligned_cols=253 Identities=21% Similarity=0.282 Sum_probs=196.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCc--hHHHHHHHHHHHhhccccccceeeeEeecCCce----
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER---- 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~---- 302 (552)
++|.+.+.||+|+||.||+|.. .+++.||||+++...... ....+.+|+.++..++||||+++++++......
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5788899999999999999996 578999999997653322 234688999999999999999999998765543
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
++||||+++|+|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 99999999999999998777899999999999999999999999 999999999999999999999999999986654
Q ss_pred CCCc--eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 383 CDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 383 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
.... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .............
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~--- 238 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIP--- 238 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCC---
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCC---
Confidence 3222 223456899999999999999999999999999999999999999643221 1111111111000
Q ss_pred cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 008828 461 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 499 (552)
Q Consensus 461 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 499 (552)
+ .......+.++.+++.+||+.||++||++.++++
T Consensus 239 -~---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 239 -P---SARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp -H---HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred -c---ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 0 0001113467899999999999999998877764
No 93
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=351.26 Aligned_cols=245 Identities=25% Similarity=0.286 Sum_probs=193.3
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|++.+.||+|+||+||+|... +++.||||++....... ....+..|+..+..+ +||||+++++++......++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56888899999999999999976 79999999986543222 233455566555555 8999999999999999999999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 307 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 307 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
||+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 6688888764 45699999999999999999999999 9999999999999999999999999999876532
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
.......||+.|+|||++.+ .++.++|||||||++|||++|..++..... | ..... ....
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~-~~~~~---------~~~~ 270 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------W-QQLRQ---------GYLP 270 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------H-HHHTT---------TCCC
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------H-HHHhc---------cCCC
Confidence 22334559999999998875 799999999999999999999777653211 1 01110 0011
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..++...+..+.+++.+||+.||++|||+.|++++
T Consensus 271 ~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 271 PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 11111234779999999999999999999999864
No 94
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=357.08 Aligned_cols=251 Identities=22% Similarity=0.272 Sum_probs=192.3
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|.+.+.||+|+||+||+|... +++.||||+++... ....+.+|+.++..++||||+++++++......++|||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 457888899999999999999976 57899999997543 23467889999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC---CCceEEcccccceecCCCC
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~~~~~~~~ 384 (552)
|+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 999999999998888899999999999999999999999 9999999999999975 899999999999866432
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||....... ........... ..
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~i~~~~~-------~~ 270 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ------FMFRRILNCEY-------YF 270 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH------HHHHHHHTTCC-------CC
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH------HHHHHHHhCCC-------cc
Confidence 22334569999999999999999999999999999999999999996432210 01111111100 00
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
........+..+.+++.+||+.||++|||+.|++++
T Consensus 271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111112334678999999999999999999999975
No 95
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=6.7e-44 Score=353.74 Aligned_cols=261 Identities=23% Similarity=0.352 Sum_probs=206.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-----CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC--Cce
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TER 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~--~~~ 302 (552)
+.|++.+.||+|+||.||+|.+ .+++.||+|+++..........+.+|+.++..++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3477889999999999999984 368899999998655445566799999999999999999999999876 668
Q ss_pred eEEEeeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 303 LLVYPYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
++||||+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 99999999999999995 456799999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCc--eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCccc-------cccc-chHHHHHHHh
Q 008828 382 HCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTA-------NQKG-AMLDWVKKIH 451 (552)
Q Consensus 382 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~-------~~~~-~~~~~~~~~~ 451 (552)
..... ......||..|+|||.+.+..++.++||||||+++|||+||+.|+...... .... ........
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 255 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT-- 255 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH--
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH--
Confidence 54332 223455888899999999999999999999999999999999886532110 0000 00011111
Q ss_pred hhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 452 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.........+...++.+.+++.+||+.||.+|||+.|+++.|+.
T Consensus 256 --------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 256 --------LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp --------HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred --------HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 11111112233445789999999999999999999999999975
No 96
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2e-43 Score=344.44 Aligned_cols=249 Identities=21% Similarity=0.307 Sum_probs=203.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecC--CceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~--~~~~lv~ 306 (552)
++|.+.+.||+|+||+||+|.++ ++.||||+++..... .....+.+|+.++++++||||+++++++... ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888899999999999999986 889999999765322 2345689999999999999999999999887 7789999
Q ss_pred eeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 307 PYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999998654 589999999999999999999998 7 99999999999999999999999998754322
Q ss_pred CCCceeecccccccccCchhhccCCCCC---ccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhh
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSE---KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 459 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (552)
....||+.|+|||.+.+..++. ++|||||||++|||+||+.||...... .......
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~-------- 224 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-------EIGMKVA-------- 224 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-------HHHHHHH--------
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-------HHHHHHH--------
Confidence 2235899999999998765544 799999999999999999999743211 1111111
Q ss_pred ccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 460 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
........+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 225 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 225 -LEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp -HSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 11111222333457799999999999999999999999999863
No 97
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.2e-43 Score=354.15 Aligned_cols=252 Identities=23% Similarity=0.267 Sum_probs=198.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE----CCCcEEEEEEeccCcc---CchHHHHHHHHHHHhhccccccceeeeEeecCCc
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~ 301 (552)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.... ......+.+|+.++..++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788899999999999999997 4689999999976432 1223457889999999999999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
.++||||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999999998777899999999999999999999999 99999999999999999999999999997543
Q ss_pred CCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+...
T Consensus 173 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~-------- 236 (327)
T 3a62_A 173 HDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-------KKTIDKILKC-------- 236 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHT--------
T ss_pred cCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhC--------
Confidence 222 223445699999999999999999999999999999999999999974322 1111111111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLE 502 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~ 502 (552)
. ..++...+..+.+++.+||+.||++|| ++.|++++--
T Consensus 237 -~--~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 237 -K--LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp -C--CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred -C--CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 0 112223347789999999999999999 7778877544
No 98
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-43 Score=361.53 Aligned_cols=267 Identities=18% Similarity=0.212 Sum_probs=213.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCC--ceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--ERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~--~~~lv~ 306 (552)
++|.+.+.||+|+||+||+|... +++.||||+++..........+.+|+++++.++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56888899999999999999976 589999999976554445667889999999999999999999988765 679999
Q ss_pred eeccCCChhhhhccCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee----CCCCceEEccccccee
Q 008828 307 PYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVVGDFGLAKL 379 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~~~ 379 (552)
||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997533 399999999999999999999999 99999999999999 7888899999999987
Q ss_pred cCCCCCceeecccccccccCchhhcc--------CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHh
Q 008828 380 LDHCDSHVTTAVRGTVGHIAPEYLST--------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 451 (552)
Q Consensus 380 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 451 (552)
..... ......||..|+|||++.. ..++.++|||||||++|||+||+.||......... ...+....
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~---~~~~~~~~ 240 (396)
T 4eut_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN---KEVMYKII 240 (396)
T ss_dssp CCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC---HHHHHHHH
T ss_pred ccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch---HHHHHHHh
Confidence 65322 2234569999999999875 56788999999999999999999999753332221 12222221
Q ss_pred hhcchhh---h---c--------cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 452 QEKKLEM---L---V--------DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 452 ~~~~~~~---~---~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
....... + . +..............+.+++.+||+.||++||++.|+++.+++.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 1111000 0 0 00112234577888999999999999999999999999888763
No 99
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.4e-43 Score=356.67 Aligned_cols=251 Identities=23% Similarity=0.278 Sum_probs=206.3
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhc-cccccceeeeEeecCCcee
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~ 303 (552)
..++|.+.+.||+|+||+||+|..+ +++.||+|+++... .......+..|..++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3467889999999999999999986 47899999997542 122345678899999887 7999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 304 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
+||||+++|+|.+++.....+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999999998777899999999999999999999999 9999999999999999999999999999854322
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... .
T Consensus 175 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~---------~ 237 (353)
T 2i0e_A 175 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEH---------N 237 (353)
T ss_dssp -TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHC---------C
T ss_pred -CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhC---------C
Confidence 2233456799999999999999999999999999999999999999974321 1111111111 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVRM 500 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 500 (552)
..++...+.++.+++.+||+.||++||+ ++|++++
T Consensus 238 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1122334578999999999999999995 4677654
No 100
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=9.3e-44 Score=356.11 Aligned_cols=267 Identities=22% Similarity=0.379 Sum_probs=215.6
Q ss_pred cCHHHHHHHhcCCCCCCeeeeeCceEEEEEEEC------CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceee
Q 008828 220 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 293 (552)
Q Consensus 220 ~~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~ 293 (552)
+..++++...++|.+.+.||+|+||.||+|... +++.||+|.++..........+.+|+.++..++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344555566788999999999999999999864 36789999997655444455789999999999999999999
Q ss_pred eEeecCCceeEEEeeccCCChhhhhccC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee
Q 008828 294 GFCMTTTERLLVYPYMSNGSVASRLKAK----------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 363 (552)
Q Consensus 294 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 363 (552)
+++......++||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 9999999999999999999999998632 4579999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCccccccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 441 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~ 441 (552)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||.....
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----- 246 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----- 246 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----
Confidence 99999999999999865432211 1122346889999999999999999999999999999999 8888864321
Q ss_pred chHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 008828 442 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 506 (552)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 506 (552)
........... . ...+...+..+.+++.+||+.||++|||+.|++++|+....
T Consensus 247 --~~~~~~~~~~~-~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 --EQVLRFVMEGG-L---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp --HHHHHHHHTTC-C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred --HHHHHHHHcCC-c---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11111111111 0 11122334779999999999999999999999999998543
No 101
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.4e-43 Score=353.38 Aligned_cols=258 Identities=26% Similarity=0.366 Sum_probs=193.3
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEECC-C---cEEEEEEeccCc-cCchHHHHHHHHHHHhhccccccceeeeEeecCCc
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQD-G---TVVAVKRLKDGN-AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~ 301 (552)
...++|.+.+.||+|+||+||+|.... + ..||||+++... .......+.+|+.++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345679999999999999999999653 3 279999997543 22345679999999999999999999999987765
Q ss_pred e------eEEEeeccCCChhhhhccC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCce
Q 008828 302 R------LLVYPYMSNGSVASRLKAK------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEA 369 (552)
Q Consensus 302 ~------~lv~e~~~~g~L~~~l~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 369 (552)
. ++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 8999999999999998532 2699999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHH
Q 008828 370 VVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWV 447 (552)
Q Consensus 370 kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 447 (552)
||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||+| |+.||....... . .
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~---~ 249 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----I---Y 249 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----H---H
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH----H---H
Confidence 99999999866433221 2223447789999999999999999999999999999999 899887432211 1 1
Q ss_pred HHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 448 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
....... ....+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 250 ~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 250 NYLIGGN----------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp HHHHTTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCC----------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111111 1112223447799999999999999999999999999863
No 102
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.8e-43 Score=361.76 Aligned_cols=252 Identities=21% Similarity=0.287 Sum_probs=200.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-chHHHHHHHHHHHhhcc--ccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAV--HRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~--h~niv~l~~~~~~~~~~~lv~ 306 (552)
.+|.+.+.||+|+||+||+|...+++.||||++...... .....+.+|+.++..++ ||||+++++++......++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458889999999999999999888999999999654322 23457899999999996 599999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
| +.+++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++........
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 56789999999888899999999999999999999999 999999999999996 589999999999876533222
Q ss_pred -eeecccccccccCchhhcc-----------CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhc
Q 008828 387 -VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 454 (552)
Q Consensus 387 -~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 454 (552)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~------- 277 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKL------- 277 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHH-------
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHH-------
Confidence 2344569999999999875 4689999999999999999999999964221 11111
Q ss_pred chhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 455 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
..+.+......++...+..+.+++.+||+.||++|||+.|++++-
T Consensus 278 --~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 278 --HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp --HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --HHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 112222222222222246789999999999999999999998753
No 103
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7e-43 Score=357.47 Aligned_cols=251 Identities=22% Similarity=0.278 Sum_probs=206.2
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|.+.+.||+|+||+||+|... +++.||+|++..... .....+.+|+.++..++||||+++++++......++||||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 57889999999999999999975 689999999965432 2344688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC--CCceEEcccccceecCCCCC
Q 008828 309 MSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--YYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 309 ~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~~~~ 385 (552)
+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999754 4799999999999999999999999 9999999999999974 5789999999998775432
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ...+........ ..+
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~i~~~~~---~~~---- 270 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LETLQNVKRCDW---EFD---- 270 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHCCC---CCC----
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCC---CCC----
Confidence 23344699999999999999999999999999999999999999974321 111111111100 011
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.......+.++.+++.+||+.||++|||+.|++++
T Consensus 271 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 271 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11112234678999999999999999999999975
No 104
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.3e-42 Score=349.14 Aligned_cols=256 Identities=18% Similarity=0.181 Sum_probs=206.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|.+.+.||+|+||+||+|.. .+++.||||++..... ...+.+|+.++..+ +||||+++++++......++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 5788899999999999999996 4789999999865432 23578999999999 89999999999999999999999
Q ss_pred eccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc-----eEEcccccceecC
Q 008828 308 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLLD 381 (552)
Q Consensus 308 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~~~~~ 381 (552)
|+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 8999999975 46799999999999999999999999 9999999999999998887 9999999998765
Q ss_pred CCCCc------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcc
Q 008828 382 HCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 455 (552)
Q Consensus 382 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (552)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .............
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~----~~~~~~~i~~~~~ 237 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT----LKERYQKIGDTKR 237 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS----HHHHHHHHHHHHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc----HHHHHHHHHhhhc
Confidence 43321 1235569999999999999999999999999999999999999997543211 1111111111000
Q ss_pred hhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 456 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.. ....+. ...+ ++.+++.+||+.||.+||++.++.+.|++
T Consensus 238 -~~-~~~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 238 -AT-PIEVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp -HS-CHHHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred -cC-CHHHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 00 000000 1122 79999999999999999999999998874
No 105
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-43 Score=344.60 Aligned_cols=254 Identities=25% Similarity=0.351 Sum_probs=207.0
Q ss_pred cCCCCCC-eeeeeCceEEEEEEEC---CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 230 SNFSSKN-LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 230 ~~~~~~~-~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
++|.+.+ .||+|+||.||+|... ++..||+|+++..........+.+|+.++..++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 8999999999999853 57889999998654444556799999999999999999999999 45678999
Q ss_pred EeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 306 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999864 45699999999999999999999999 99999999999999999999999999998775433
Q ss_pred Cce--eecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 385 SHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 385 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .........
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~i~~~-------- 229 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQG-------- 229 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-------HHHHHHHTT--------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHhcC--------
Confidence 322 123346889999999998899999999999999999999 99999643221 111111111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.....+...+..+.+++.+||+.||++||++.+++++|+..
T Consensus 230 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 230 --KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp --CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11122333457899999999999999999999999999874
No 106
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=353.39 Aligned_cols=254 Identities=23% Similarity=0.392 Sum_probs=200.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCc----EEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGT----VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++|.+.+.||+|+||+||+|.+. +++ .||+|.++..........+.+|+.++..++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57888899999999999999964 344 358888766555556678999999999999999999999998754 789
Q ss_pred EEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 305 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
|+||+.+|+|.+++.. ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 9999999999999975 45799999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 384 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 384 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
... ......+|..|+|||.+.+..++.++|||||||++|||+| |+.||....... .... . .
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~~---~----------~ 233 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSI---L----------E 233 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHH---H----------H
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH----HHHH---H----------H
Confidence 222 2233447889999999999999999999999999999999 999997432211 1111 1 1
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.......+...+..+.+++.+||+.||.+|||+.|+++.|+..
T Consensus 234 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 234 KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111112233446799999999999999999999999999874
No 107
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.3e-43 Score=342.97 Aligned_cols=251 Identities=29% Similarity=0.500 Sum_probs=202.3
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchH------HHHHHHHHHHhhccccccceeeeEeecCCce
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGE------IQFQTEVEMISLAVHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~------~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~ 302 (552)
++|.+.+.||+|+||+||+|... +++.||+|++......... ..+.+|+.++..++||||+++++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 57888899999999999999974 7899999999654332221 56889999999999999999999986554
Q ss_pred eEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcCCCCCceeeCCCCc-----eEEccc
Q 008828 303 LLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYE-----AVVGDF 374 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~Df 374 (552)
++||||+++|+|.+.+.. ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999888764 45799999999999999999999998 8 999999999999988776 999999
Q ss_pred ccceecCCCCCceeecccccccccCchhhc--cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 375 GLAKLLDHCDSHVTTAVRGTVGHIAPEYLS--TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 375 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
|+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||...... ...+......
T Consensus 174 g~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~ 244 (287)
T 4f0f_A 174 GLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFINMIRE 244 (287)
T ss_dssp TTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHHHHHH
T ss_pred Cccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHHHHhc
Confidence 99975432 234456999999999984 456789999999999999999999999743221 1111111111
Q ss_pred hcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 453 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.......+...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 245 ---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 245 ---------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp ---------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111222233445789999999999999999999999999975
No 108
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7e-43 Score=353.90 Aligned_cols=252 Identities=21% Similarity=0.256 Sum_probs=202.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc----cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN----AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++|++.+.||+|+||+||+|... +++.||||+++... .......+.+|+.++..++||||+++++++......++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46888899999999999999975 68999999986321 11235678999999999999999999999999999999
Q ss_pred EEeeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc---eEEcccccc
Q 008828 305 VYPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLA 377 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~ 377 (552)
||||+++|+|.+.+.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999887753 34589999999999999999999999 9999999999999986554 999999999
Q ss_pred eecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchh
Q 008828 378 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 457 (552)
Q Consensus 378 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (552)
+...... .......||+.|+|||++.+..++.++|||||||++|+|+||+.||..... .......... .
T Consensus 181 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~i~~~~-~- 249 (351)
T 3c0i_A 181 IQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--------RLFEGIIKGK-Y- 249 (351)
T ss_dssp EECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--------HHHHHHHHTC-C-
T ss_pred eEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--------HHHHHHHcCC-C-
Confidence 8765432 223345699999999999999999999999999999999999999974211 1111111110 0
Q ss_pred hhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 458 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+.... ..+..+.+++.+||+.||++|||+.|++++
T Consensus 250 -~~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 -KMNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -CCCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -CCCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000011 124678999999999999999999999863
No 109
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6e-43 Score=342.16 Aligned_cols=253 Identities=23% Similarity=0.348 Sum_probs=207.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|++.+.||+|+||.||+|... +++.||+|++...........+.+|+.++..++||||+++++++......++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 56888899999999999999976 68999999997655445566789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC-ce
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-HV 387 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~ 387 (552)
+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........ ..
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999999998888899999999999999999999999 999999999999999999999999999986543221 12
Q ss_pred eecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 388 TTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
.....||..|+|||.+.+..+ +.++||||||+++|||+||+.||........ ....|. ..... .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~----~~~~~---~------ 228 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWK----EKKTY---L------ 228 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHHHH----TTCTT---S------
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHhh----hcccc---c------
Confidence 234568999999999987765 7899999999999999999999975332111 011111 10000 0
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
......+..+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0011234678899999999999999999999864
No 110
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.8e-42 Score=341.35 Aligned_cols=259 Identities=17% Similarity=0.187 Sum_probs=207.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+.++..+ +|+|++++++++......++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 35788899999999999999996 5789999999865432 23477899999998 7999999999999999999999
Q ss_pred eeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc-----eEEcccccceec
Q 008828 307 PYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLL 380 (552)
Q Consensus 307 e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~~~~ 380 (552)
||+ +++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++. +||+|||+++..
T Consensus 86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 999 99999999854 4699999999999999999999999 9999999999999987776 999999999876
Q ss_pred CCCCCc------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhc
Q 008828 381 DHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 454 (552)
Q Consensus 381 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 454 (552)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ....+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~ 240 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ-KYERIGEKKQST 240 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH-HHHHHHHHHHHS
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH-HHHHHHhhccCc
Confidence 543321 2244569999999999999999999999999999999999999997543221111 111111111001
Q ss_pred chhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 455 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.... . ....+..+.+++.+||+.||++||++++|++.|+..
T Consensus 241 ~~~~-----~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 241 PLRE-----L----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp CHHH-----H----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred cHHH-----H----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 1111 1 112247799999999999999999999999999863
No 111
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.5e-43 Score=347.87 Aligned_cols=255 Identities=26% Similarity=0.339 Sum_probs=205.4
Q ss_pred hcCCCCCC-eeeeeCceEEEEEEEC---CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCcee
Q 008828 229 TSNFSSKN-LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 229 ~~~~~~~~-~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~ 303 (552)
.++|.+.+ .||+|+||+||+|.+. +++.||||+++...... ....+.+|+.++..++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 9999999999999642 46889999997543322 245789999999999999999999999 567789
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 304 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
+||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 9999999999999999888899999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCcee--ecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 384 DSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 384 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
..... ....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... .........
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~------- 236 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKG------- 236 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTT-------
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHcC-------
Confidence 33222 22346788999999999899999999999999999999 99998743221 111111111
Q ss_pred cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 461 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 461 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.....+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 237 ---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 237 ---ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01112233457899999999999999999999999999873
No 112
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.4e-43 Score=369.07 Aligned_cols=253 Identities=23% Similarity=0.229 Sum_probs=199.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
.++|++.+.||+|+||.||+|... +|+.||||+++... .......+.+|+.++..++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 356888999999999999999965 68999999997532 222334678899999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|||+++|+|.+++.....+++..+..++.||+.||.|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD- 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC-
Confidence 9999999999999887889999999999999999999998 7 9999999999999999999999999999754322
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......... .
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~---------~- 365 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILME---------E- 365 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHC---------C-
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHHhC---------C-
Confidence 2233446799999999999999999999999999999999999999964322 1111111111 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHhc
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLEG 503 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~ 503 (552)
..++...+.++.+++.+||+.||++|| +++|++++---
T Consensus 366 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f 408 (446)
T 4ejn_A 366 -IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408 (446)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred -CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccc
Confidence 112223347789999999999999999 99999875443
No 113
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.5e-43 Score=343.06 Aligned_cols=247 Identities=20% Similarity=0.304 Sum_probs=183.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|++.+.||+|+||.||+|... +++.||+|+++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999964 689999999975432 223457889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+ +++|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred hhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc--
Confidence 999 678888888778899999999999999999999999 99999999999999999999999999998654322
Q ss_pred eeecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||..... ...........
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~----------- 228 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGV----------- 228 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-----------
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-----------
Confidence 2234458999999999988765 7899999999999999999999974321 11111111110
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+...+..+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 01122234678999999999999999999999753
No 114
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-43 Score=351.89 Aligned_cols=255 Identities=27% Similarity=0.424 Sum_probs=201.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEECC-----CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQD-----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++|...+.||+|+||+||+|.... +..||||+++..........+.+|+.++..++||||+++++++......++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456677899999999999998642 246999999765444445578999999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 305 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999754 5799999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCc--eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 384 DSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 384 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
... ......+|..|+|||.+.+..++.++|||||||++|||+| |+.||..... ...........
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~~------ 267 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDGF------ 267 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTC------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHCCC------
Confidence 221 1222346788999999999999999999999999999999 9999864321 11111111110
Q ss_pred cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 461 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 461 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
....+...+..+.+++.+||+.||++||++.+++++|+..
T Consensus 268 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 268 ----RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp ----CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ----cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111223347799999999999999999999999999863
No 115
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6.2e-43 Score=366.31 Aligned_cols=248 Identities=23% Similarity=0.350 Sum_probs=207.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.+|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++.++||||+++++++......++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888899999999999999976 799999999964321 223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++|+|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 170 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence 9999999999999888899999999999999999999999 99999999999999999999999999998765432
Q ss_pred eeecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ......+... ..
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-------~~~~~~i~~~---------~~- 233 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-------PTLFKKICDG---------IF- 233 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-------HHHHHHHHTT---------CC-
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHhcC---------Cc-
Confidence 2334569999999999988765 6899999999999999999999974322 1111111111 00
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+...+.++.+++.+||+.||++|||+.|++++
T Consensus 234 -~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 -YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1112234678999999999999999999999873
No 116
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.2e-43 Score=347.90 Aligned_cols=267 Identities=20% Similarity=0.229 Sum_probs=202.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|.+.+.||+|+||+||+|... +|+.||+|++....... ....+.+|+.++.+++||||+++++++......++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888899999999999999976 58999999986544322 23468899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 158 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-Y 158 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-c
Confidence 999999999998888899999999999999999999999 999999999999999999999999999987653222 2
Q ss_pred eecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHH--------HHHHHhhhcchhh
Q 008828 388 TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--------WVKKIHQEKKLEM 458 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 458 (552)
.....||..|+|||.+.+ ..++.++|||||||++|+|+||+.||...........+.. +............
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 334568999999999976 6689999999999999999999999975432211100000 0000000000000
Q ss_pred hccccccCcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 459 LVDKDLKNNY-----DRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 459 ~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+...... ....+..+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000000 01234678999999999999999999999975
No 117
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.2e-42 Score=341.49 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|.+.+.||+|+||.||+|... +++.||+|++...... .....+.+|+.++..++||||+++++++......++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 367889999999999999999975 5899999999754322 23456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc---eEEcccccceecCCC
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLAKLLDHC 383 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~~~~~ 383 (552)
||+++|+|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999999998778899999999999999999999999 9999999999999986655 999999999876533
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
. ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... . .
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~-~----~-- 225 (284)
T 3kk8_A 162 E--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------RLYAQIKAGA-Y----D-- 225 (284)
T ss_dssp C--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTC-C----C--
T ss_pred c--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-------HHHHHHHhcc-c----c--
Confidence 2 223456999999999999999999999999999999999999999643221 1111111110 0 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.........+..+.+++.+||+.||++|||+.|++++
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000111234678999999999999999999999863
No 118
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9e-43 Score=344.87 Aligned_cols=254 Identities=28% Similarity=0.373 Sum_probs=203.3
Q ss_pred CCCCCCeeeeeCceEEEEEEECC----CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCce-eEE
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER-LLV 305 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~-~lv 305 (552)
.|...+.||+|+||+||+|.+.+ +..||+|.++..........+.+|+.+++.++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 34556899999999999998532 2379999997655444556789999999999999999999999876655 899
Q ss_pred EeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 306 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|||+.+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999976 45789999999999999999999999 99999999999999999999999999997654321
Q ss_pred ---CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 385 ---SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 385 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
........++..|+|||.+.+..++.++||||||+++|+|+||..|+........ ... ......
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~---~~~---~~~~~~------- 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD---LTH---FLAQGR------- 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG---HHH---HHHTTC-------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH---HHH---HhhcCC-------
Confidence 1122344588999999999999999999999999999999997666543222111 111 111110
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
....+...+..+.+++.+||+.||.+|||+.++++.|+.
T Consensus 246 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 246 ---RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111122234679999999999999999999999999986
No 119
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.1e-42 Score=344.08 Aligned_cols=255 Identities=22% Similarity=0.243 Sum_probs=208.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-----hHHHHHHHHHHHhhccccccceeeeEeecCCce
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~ 302 (552)
.++|.+.+.||+|+||.||+|... +|+.||+|+++...... ....+.+|+.++..++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356888999999999999999976 68999999997543222 245789999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC----ceEEcccccce
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAK 378 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~~~ 378 (552)
++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999999998888899999999999999999999999 999999999999999888 79999999998
Q ss_pred ecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhh
Q 008828 379 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 458 (552)
Q Consensus 379 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (552)
...... ......||+.|+|||.+.+..++.++|||||||++|+|+||+.||..... ........... .
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~---~ 235 (321)
T 2a2a_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANITSVS---Y 235 (321)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTC---C
T ss_pred ecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcc---c
Confidence 765432 22345699999999999999999999999999999999999999964321 11111111100 0
Q ss_pred hccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 008828 459 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 502 (552)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 502 (552)
..++... ...+..+.+++.+||+.||++|||+.|++++--
T Consensus 236 ~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~ 275 (321)
T 2a2a_A 236 DFDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (321)
T ss_dssp CCCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred ccChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 0001111 112367899999999999999999999997543
No 120
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.7e-43 Score=358.78 Aligned_cols=253 Identities=25% Similarity=0.275 Sum_probs=199.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC--chHHHHHHHHHH-HhhccccccceeeeEeecCCceeEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEM-ISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~-l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
++|++.+.||+|+||+||+|+.+ +++.||+|+++..... .....+..|..+ ++.++||||+++++++...+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 46888899999999999999976 5889999999754322 223346667766 5678999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|||+++|+|.+++.....+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~- 193 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN- 193 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC-
Confidence 99999999999998877899999999999999999999999 99999999999999999999999999998643222
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.. ..+
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~---------~~~- 256 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-------EMYDNILN---------KPL- 256 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-------HHHHHHHH---------SCC-
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHh---------ccc-
Confidence 2334567999999999999999999999999999999999999999743221 11111111 110
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.++...+..+.+++.+||+.||++||++.+.++.+..+
T Consensus 257 -~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 257 -QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp -CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred -CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 11222346789999999999999999986555555544
No 121
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=6.5e-43 Score=356.16 Aligned_cols=264 Identities=17% Similarity=0.174 Sum_probs=202.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECC------CcEEEEEEeccCccCc-h---------HHHHHHHHHHHhhcccccccee
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIG-G---------EIQFQTEVEMISLAVHRNLLRL 292 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~---------~~~~~~e~~~l~~~~h~niv~l 292 (552)
.++|.+.+.||+|+||+||+|.+.+ ++.||||++....... . ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578889999999999999999764 4789999986543110 0 0123345556677789999999
Q ss_pred eeEeecC----CceeEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC--C
Q 008828 293 IGFCMTT----TERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD--E 365 (552)
Q Consensus 293 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~ 365 (552)
++++... ...++||||+ +++|.+++... ..+++..+..|+.||+.||.|||+. +|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 9998765 4579999999 99999999765 6799999999999999999999999 999999999999999 8
Q ss_pred CCceEEcccccceecCCCCCc------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCccccc
Q 008828 366 YYEAVVGDFGLAKLLDHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ 439 (552)
Q Consensus 366 ~~~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~ 439 (552)
++.+||+|||+++.+...... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-- 267 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-- 267 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC--
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC--
Confidence 899999999999876432211 113345999999999999999999999999999999999999999742211
Q ss_pred ccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 440 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.....+.... ....+..+.+..+.. ...+.++.+++..||+.+|++||++.++++.|+.
T Consensus 268 -~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 268 -PKYVRDSKIR-YRENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp -HHHHHHHHHH-HHHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred -HHHHHHHHHH-hhhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 1111111111 112233333333221 1123679999999999999999999999998875
No 122
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.2e-42 Score=357.52 Aligned_cols=269 Identities=19% Similarity=0.226 Sum_probs=203.8
Q ss_pred hcCCCCCCeeeee--CceEEEEEEEC-CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 229 TSNFSSKNLVGKG--GFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 229 ~~~~~~~~~iG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
..+|++.+.||+| +||+||+|+.. +++.||||+++...... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4578889999999 99999999976 69999999997544322 23468889999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 305 VYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
||||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999754 6799999999999999999999999 999999999999999999999999999865422
Q ss_pred CCC------ceeecccccccccCchhhcc--CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchH-HHHHHHhh-
Q 008828 383 CDS------HVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML-DWVKKIHQ- 452 (552)
Q Consensus 383 ~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~-~~~~~~~~- 452 (552)
... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||............. ........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 111 11122368999999999987 578999999999999999999999997533211100000 00000000
Q ss_pred -----------------hcchhhhcc---------ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 453 -----------------EKKLEMLVD---------KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 453 -----------------~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
......... ......+....+..+.+|+.+||+.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000000 000011223345779999999999999999999999865
No 123
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.2e-43 Score=354.33 Aligned_cols=272 Identities=24% Similarity=0.309 Sum_probs=210.6
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-----CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEee--cCCce
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTER 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~--~~~~~ 302 (552)
++|++.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|++++.+++||||+++++++. .....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5688889999999999999984 358899999997543 233456899999999999999999999887 45568
Q ss_pred eEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 303 LLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
++||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 899999999999999975 45699999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCc--eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhh
Q 008828 382 HCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 459 (552)
Q Consensus 382 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (552)
..... ......||..|+|||.+.+..++.++|||||||++|+|++|+.||........... .+.............
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM--GCERDVPALSRLLEL 256 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHC--C----CCHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhc--ccccccccHHHHHHH
Confidence 43332 22334578889999999999999999999999999999999999864322100000 000000000011111
Q ss_pred ccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCc
Q 008828 460 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 507 (552)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 507 (552)
.........+...+..+.+++.+||+.||++|||+.|++++|+.....
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 112222223344557899999999999999999999999999986443
No 124
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.6e-42 Score=339.53 Aligned_cols=250 Identities=21% Similarity=0.282 Sum_probs=199.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|.+.+.||+|+||+||+|... ++..||+|++...........+.+|+++++.++||||+++++++......++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46888899999999999999975 68899999997665555567899999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee---CCCCceEEcccccceecC
Q 008828 309 MSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 309 ~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~ 381 (552)
+++|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999998853 46799999999999999999999999 99999999999999 456889999999998654
Q ss_pred CCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
... ......||..|+|||.+. ..++.++|||||||++|||++|+.||...... ..........
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~------- 241 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-------EVQQKATYKE------- 241 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC-------
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-------HHHhhhccCC-------
Confidence 322 233456899999999985 57899999999999999999999999743211 1111111000
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..... .....++.+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 242 PNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 000123678899999999999999999999864
No 125
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.4e-42 Score=342.79 Aligned_cols=260 Identities=18% Similarity=0.176 Sum_probs=202.0
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc--hHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
.++|.+.+.||+|+||.||+|... +++.||+|+++...... ....+.+|+.++..++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467889999999999999999975 68899999997543322 235688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999999998877899999999999999999999999 999999999999999999999999999986654333
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
.......|+..|+|||.+.+..++.++||||||+++|||+||+.||...... .+....... ... .
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~----~~~---~ 254 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQA----IPR---P 254 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSC----CCC---G
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccC----CCC---c
Confidence 3334456899999999999999999999999999999999999999743211 111111100 000 0
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhcCCC
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRP-KMSEVVRMLEGDGL 506 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~ 506 (552)
...+...+..+.+++.+||+.||++|| +++++++.|+....
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 111223346789999999999999999 99999999997533
No 126
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.7e-43 Score=378.03 Aligned_cols=246 Identities=25% Similarity=0.360 Sum_probs=199.9
Q ss_pred eeeeeCceEEEEEEEC---CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEeeccCCC
Q 008828 237 LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 313 (552)
Q Consensus 237 ~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 313 (552)
.||+|+||.||+|.+. ++..||||+++..........|.+|+.++.+++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 4668999999876555556789999999999999999999999976 56899999999999
Q ss_pred hhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCcee--ec
Q 008828 314 VASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT--TA 390 (552)
Q Consensus 314 L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~--~~ 390 (552)
|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999974 45699999999999999999999999 999999999999999999999999999987643332221 22
Q ss_pred ccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcCC
Q 008828 391 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD 469 (552)
Q Consensus 391 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (552)
..+++.|+|||++.+..++.++|||||||++|||+| |+.||...... +....+... .....+
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~----------~~~~~p 561 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQG----------KRMECP 561 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-------HHHHHHHTT----------CCCCCC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHHHHcC----------CCCCCC
Confidence 335689999999999999999999999999999998 99999743221 111111111 111223
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 470 RIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 470 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
..++..+.+++.+||+.||++||++.+|++.|+.
T Consensus 562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 562 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 3455789999999999999999999999999986
No 127
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.9e-43 Score=342.97 Aligned_cols=248 Identities=28% Similarity=0.402 Sum_probs=203.2
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
.++|.+.+.||+|+||+||+|... ++..||+|++..... ......+.+|+.+++.++||||+++++++......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 356888899999999999999975 577999999864321 12245688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-- 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc--
Confidence 99999999999998877899999999999999999999998 9999999999999999999999999998654322
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......||..|+|||.+.+..++.++||||||+++|+|++|+.||..... .......... .
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~-----------~ 223 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRISRV-----------E 223 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHT-----------C
T ss_pred -cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-------HHHHHHHHhC-----------C
Confidence 22345689999999999999999999999999999999999999974321 1111111110 0
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..++...+..+.+++.+||+.||++|||+.|++++
T Consensus 224 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 224 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11222234678999999999999999999999975
No 128
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.3e-43 Score=353.10 Aligned_cols=259 Identities=22% Similarity=0.232 Sum_probs=201.8
Q ss_pred HHHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc----cCchHHHHHHHHHHHhhccccccceeeeEeecC
Q 008828 225 LQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN----AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT 299 (552)
Q Consensus 225 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~ 299 (552)
+....++|.+.+.||+|+||+||+|... ++..||+|+++... .......+.+|+.++..++||||+++++++...
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3455678999999999999999999975 68899999986432 233456789999999999999999999999999
Q ss_pred CceeEEEeeccCCChhhhhcc----------------------------------------CCCCCHHHHHHHHHHHHHH
Q 008828 300 TERLLVYPYMSNGSVASRLKA----------------------------------------KPSLDWATRKRIALGAARG 339 (552)
Q Consensus 300 ~~~~lv~e~~~~g~L~~~l~~----------------------------------------~~~l~~~~~~~i~~~ia~~ 339 (552)
...++||||+++|+|.+++.. ...+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999998852 1123677888999999999
Q ss_pred HHHHhhcCCCceEEcCCCCCceeeCCCC--ceEEcccccceecCCCCC---ceeecccccccccCchhhcc--CCCCCcc
Q 008828 340 LLYLHEQCDPKIIHRDVKAANILLDEYY--EAVVGDFGLAKLLDHCDS---HVTTAVRGTVGHIAPEYLST--GQSSEKT 412 (552)
Q Consensus 340 l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 412 (552)
|.|||+. +|+||||||+|||++.++ .+||+|||+++....... .......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998766 899999999986543221 12344569999999999975 6789999
Q ss_pred chhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCC
Q 008828 413 DVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRP 492 (552)
Q Consensus 413 Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 492 (552)
|||||||++|||++|+.||...... +........... .........+..+.+++.+||+.||++||
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLC-------FENPNYNVLSPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCC-------TTSGGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcccc-------cCCcccccCCHHHHHHHHHHcCCChhHCC
Confidence 9999999999999999999643221 111111111100 00011112346789999999999999999
Q ss_pred CHHHHHHH
Q 008828 493 KMSEVVRM 500 (552)
Q Consensus 493 s~~evl~~ 500 (552)
|+.|++++
T Consensus 324 s~~~~l~h 331 (345)
T 3hko_A 324 DAMRALQH 331 (345)
T ss_dssp CHHHHHHS
T ss_pred CHHHHhcC
Confidence 99999874
No 129
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-43 Score=357.72 Aligned_cols=258 Identities=22% Similarity=0.273 Sum_probs=207.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEE----CCCcEEEEEEeccCcc---CchHHHHHHHHHHHhhc-cccccceeeeEeecCCc
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~ 301 (552)
++|.+.+.||+|+||+||+|+. .+++.||||+++.... ......+.+|+.++..+ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5688899999999999999997 3689999999975321 12234567899999999 59999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
.++||||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999999998777899999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccCchhhcc--CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhh
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 459 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (552)
...........||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ...........
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~------ 281 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS---QAEISRRILKS------ 281 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC---HHHHHHHHHHC------
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch---HHHHHHHHhcc------
Confidence 433333445679999999999986 3478999999999999999999999975432211 11111111110
Q ss_pred ccccccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHhcC
Q 008828 460 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLEGD 504 (552)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~ 504 (552)
...++...+..+.+++.+||+.||++|| +++|++++..-.
T Consensus 282 -----~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~ 326 (355)
T 1vzo_A 282 -----EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326 (355)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred -----CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchh
Confidence 1112233446789999999999999999 999999876653
No 130
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-43 Score=357.50 Aligned_cols=253 Identities=30% Similarity=0.440 Sum_probs=193.5
Q ss_pred CCCCCCeeeeeCceEEEEEEEC--C--CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeec-CCceeEE
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQ--D--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT-TTERLLV 305 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~-~~~~~lv 305 (552)
.|.+.+.||+|+||+||+|.+. + +..||+|.++.........+|.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3556689999999999999864 2 246899999765544556679999999999999999999998764 4578999
Q ss_pred EeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC
Q 008828 306 YPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999754 4689999999999999999999999 99999999999999999999999999998654322
Q ss_pred Cc---eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 385 SH---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 385 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
.. ......+|+.|+|||.+.+..++.++|||||||++|||+| |.+||...... .... ......
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~~---~~~~~~------ 313 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITV---YLLQGR------ 313 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHHH---HHHTTC------
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHHH---HHHcCC------
Confidence 11 1233457889999999999999999999999999999999 56666532211 1111 111111
Q ss_pred cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 461 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 461 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 314 ----~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~ 352 (373)
T 3c1x_A 314 ----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352 (373)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 001122234679999999999999999999999999986
No 131
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=8.5e-43 Score=370.25 Aligned_cols=254 Identities=24% Similarity=0.302 Sum_probs=208.2
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++..++||||+++++++......++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 466888899999999999999975 69999999996432 122345688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 306 YPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
|||+++|+|.+++.... .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987543 499999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+... .. .
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~---i~-~---------- 403 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL---VK-E---------- 403 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH---HH-H----------
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH---hh-c----------
Confidence 2 233457999999999999989999999999999999999999999754321111111111 11 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRML 501 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 501 (552)
....++...+.++.+++.+||+.||++|| ++.|++++-
T Consensus 404 ~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp 446 (576)
T 2acx_A 404 VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446 (576)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence 01112233447899999999999999999 778887653
No 132
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.5e-43 Score=350.53 Aligned_cols=244 Identities=21% Similarity=0.287 Sum_probs=205.1
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-------hHHHHHHHHHHHhhccccccceeeeEeecCC
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-------GEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 300 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~ 300 (552)
.++|.+.+.||+|+||+||+|... +++.||||+++...... ....+.+|+.++..++||||+++++++....
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 467899999999999999999964 68999999997543211 2235678999999999999999999999999
Q ss_pred ceeEEEeeccCC-ChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 301 ERLLVYPYMSNG-SVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 301 ~~~lv~e~~~~g-~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
..++||||+.+| +|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 999999999777 9999999888899999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhh
Q 008828 380 LDHCDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 458 (552)
Q Consensus 380 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (552)
...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 180 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------------- 236 (335)
T 3dls_A 180 LERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------------- 236 (335)
T ss_dssp CCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------------
T ss_pred CCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------------
Confidence 754332 234569999999999988876 88999999999999999999999632110
Q ss_pred hccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 459 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
...... .+...+.++.+++.+||+.||++|||+.|++++-
T Consensus 237 -~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 237 -VEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp -TTTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred -HhhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 000000 0111346789999999999999999999999864
No 133
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.5e-43 Score=376.54 Aligned_cols=258 Identities=27% Similarity=0.369 Sum_probs=211.1
Q ss_pred HHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeE
Q 008828 225 LQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 304 (552)
Q Consensus 225 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~l 304 (552)
++...++|.+.+.||+|+||.||+|.++++..||||+++.... ....|.+|+.++++++||||+++++++.. ...++
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 3344567888899999999999999998888999999976442 34579999999999999999999999876 67899
Q ss_pred EEeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 305 VYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
||||+++|+|.+++.. ...+++..+..|+.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999999974 35699999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
..........++..|+|||.+....++.++|||||||++|||+| |+.||..... .+....+...
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-------~~~~~~i~~~-------- 480 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERG-------- 480 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-------HHHHHHHHTT--------
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcC--------
Confidence 21112223346789999999999999999999999999999999 8988864321 1111111111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 505 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 505 (552)
.....+..++..+.+++.+||+.||++|||+.+|++.|+...
T Consensus 481 --~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 481 --YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111122334578999999999999999999999999999753
No 134
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=349.43 Aligned_cols=264 Identities=25% Similarity=0.301 Sum_probs=199.1
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCcc----CchHHHHHHHHHHHhhcc---ccccceeeeEeecC
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNA----IGGEIQFQTEVEMISLAV---HRNLLRLIGFCMTT 299 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~~~---h~niv~l~~~~~~~ 299 (552)
..++|++.+.||+|+||+||+|.. .+++.||||+++.... ......+.+|+.+++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999996 4689999999964321 112235677888877665 99999999999875
Q ss_pred C-----ceeEEEeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEc
Q 008828 300 T-----ERLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVG 372 (552)
Q Consensus 300 ~-----~~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 372 (552)
. ..++||||+. |+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999997 59999997654 399999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 373 DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 373 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
|||+++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ..........
T Consensus 163 Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~ 237 (308)
T 3g33_A 163 DFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFDLIGL 237 (308)
T ss_dssp SCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH---HHHHHHHHCC
T ss_pred eCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCC
Confidence 99999865432 223455689999999999999999999999999999999999999975332111 1111111100
Q ss_pred ---hcchhhh--cccccc-------CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 453 ---EKKLEML--VDKDLK-------NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 453 ---~~~~~~~--~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
....... ...... .......++.+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 000000 00011234678999999999999999999999864
No 135
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.3e-42 Score=343.88 Aligned_cols=255 Identities=30% Similarity=0.428 Sum_probs=200.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEECC----CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEee-cCCceeE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM-TTTERLL 304 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~-~~~~~~l 304 (552)
.+|.+.+.||+|+||+||+|...+ +..||+|.++..........+.+|+.++++++||||+++++++. .....++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999998642 23689999976554445567899999999999999999999865 4567899
Q ss_pred EEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 305 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999999975 45689999999999999999999999 9999999999999999999999999999866432
Q ss_pred CC---ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 384 DS---HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 384 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
.. .......+|+.|+|||.+.+..++.++||||||+++|||++|..|+....... ... .......
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~---~~~~~~~------ 249 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DIT---VYLLQGR------ 249 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---THH---HHHHTTC------
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---HHH---HHHhcCC------
Confidence 21 12233457889999999999999999999999999999999554443222111 111 1111110
Q ss_pred cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 461 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 461 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 250 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 250 ----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 011112234679999999999999999999999999986
No 136
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9.7e-43 Score=352.22 Aligned_cols=266 Identities=18% Similarity=0.185 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC----CCcEEEEEEeccCccCc----------hHHHHHHHHHHHhhccccccceeeeE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIG----------GEIQFQTEVEMISLAVHRNLLRLIGF 295 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~~~h~niv~l~~~ 295 (552)
++|.+.+.||+|+||+||+|... ++..||+|++....... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999975 57889999987543210 11236678888899999999999999
Q ss_pred eec----CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC--ce
Q 008828 296 CMT----TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY--EA 369 (552)
Q Consensus 296 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~ 369 (552)
+.. ....++||||+ +++|.+++.....+++..++.++.||+.||.|||+. +|+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcE
Confidence 987 67889999999 999999998777899999999999999999999999 999999999999999877 99
Q ss_pred EEcccccceecCCCCCc------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccch
Q 008828 370 VVGDFGLAKLLDHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 443 (552)
Q Consensus 370 kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~ 443 (552)
||+|||+++.+...... ......||..|+|||.+.+..++.++|||||||++|||+||+.||........ .
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~---~ 269 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV---A 269 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH---H
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH---H
Confidence 99999999876432111 11344699999999999999999999999999999999999999963211100 0
Q ss_pred HHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 008828 444 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 506 (552)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 506 (552)
........... .......... ....+..+.+++.+||+.||++|||+.+|++.|+....
T Consensus 270 ~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 270 VQTAKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111110000 0000000000 00233679999999999999999999999999998654
No 137
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=345.34 Aligned_cols=250 Identities=27% Similarity=0.402 Sum_probs=196.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEeec
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 309 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 309 (552)
++|++.+.||+|+||+||+|.+. ++.||+|.+... .....+.+|+.++++++||||+++++++. +..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 46778899999999999999986 789999999643 23557899999999999999999999887 4589999999
Q ss_pred cCCChhhhhccCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc-eEEcccccceecCCCCC
Q 008828 310 SNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-AVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 310 ~~g~L~~~l~~~~---~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~~~~~~~~~~ 385 (552)
++|+|.+++.... .+++..++.++.|+++||.|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 9999999997654 4789999999999999999999932239999999999999998886 799999999755422
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
.....||..|+|||.+.+..++.++|||||||++|||+||+.||...... ............ .
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~----------~ 222 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHNGT----------R 222 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-----HHHHHHHHHTTC----------C
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-----HHHHHHHHhcCC----------C
Confidence 22345899999999999999999999999999999999999999743211 111111111110 1
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.......+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 223 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 223 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 111222346789999999999999999999999999864
No 138
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.8e-44 Score=353.71 Aligned_cols=258 Identities=24% Similarity=0.327 Sum_probs=189.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhh--ccccccceeeeEeecCC----cee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTTT----ERL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--~~h~niv~l~~~~~~~~----~~~ 303 (552)
++|.+.+.||+|+||.||+|... ++.||||+++.. ....+..|.+++.. ++||||+++++++.... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 57899999999999999999875 899999998643 23456778888876 78999999999998776 789
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCceEEcCCCCCceeeCCCCceEEcccc
Q 008828 304 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEYYEAVVGDFG 375 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 375 (552)
+||||+++|+|.+++... .+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||+|||
T Consensus 78 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EEEeccCCCCHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecC
Confidence 999999999999999754 5889999999999999999999 76 99999999999999999999999999
Q ss_pred cceecCCCCCce---eecccccccccCchhhccC------CCCCccchhHHHHHHHHHHhC----------CCccccCcc
Q 008828 376 LAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISG----------LRALEFGKT 436 (552)
Q Consensus 376 ~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gv~l~elltg----------~~p~~~~~~ 436 (552)
+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| ..||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 997665433321 2334699999999999776 344689999999999999999 444432211
Q ss_pred cccccchHHHHHHHhhhcchhhhccccccCcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCc
Q 008828 437 ANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY-----DRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 507 (552)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 507 (552)
..... .. ....+......... ....+..+.+++.+||+.||++|||+.|+++.|+.....
T Consensus 234 ~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 234 SDPSV--EE---------MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp -CCCC--C----------CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred CCccH--HH---------HHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 11100 00 01111111122222 225667899999999999999999999999999986543
No 139
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.4e-42 Score=353.86 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=192.4
Q ss_pred cCCCCC-CeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHh-hccccccceeeeEeec----CCce
Q 008828 230 SNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLLRLIGFCMT----TTER 302 (552)
Q Consensus 230 ~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~-~~~h~niv~l~~~~~~----~~~~ 302 (552)
++|.+. +.||+|+||+||+|... +++.||||+++.. ..+.+|+.++. ..+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 345554 68999999999999975 6899999999632 34667888874 4589999999998865 5668
Q ss_pred eEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC---CCceEEcccccc
Q 008828 303 LLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 377 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~ 377 (552)
++||||+++|+|.+++... ..+++..+..|+.||+.||.|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999999999764 3599999999999999999999999 9999999999999997 789999999999
Q ss_pred eecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchh
Q 008828 378 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 457 (552)
Q Consensus 378 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (552)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...............+.. . ..
T Consensus 212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~---~-~~- 284 (400)
T 1nxk_A 212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---G-QY- 284 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH---T-CC-
T ss_pred cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc---C-cc-
Confidence 8654322 233456899999999999999999999999999999999999999754332211111111110 0 00
Q ss_pred hhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 458 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
..........+.++.+++.+||+.||++|||+.|++++-
T Consensus 285 -----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 285 -----EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp -----CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred -----cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 000001122346789999999999999999999999753
No 140
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=8.9e-43 Score=349.85 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=202.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcE--EEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTV--VAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv 305 (552)
++|.+.+.||+|+||.||+|... ++.. ||+|.++..........+.+|+.++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888899999999999999965 4554 4999997654444556789999999999 899999999999999999999
Q ss_pred EeeccCCChhhhhccCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCce
Q 008828 306 YPYMSNGSVASRLKAKP----------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEA 369 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~----------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 369 (552)
|||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997543 799999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHH
Q 008828 370 VVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 448 (552)
Q Consensus 370 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 448 (552)
||+|||+++..... .......++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .....
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AELYE 252 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHH
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-------HHHHH
Confidence 99999999743211 11223347889999999999899999999999999999998 9999964321 11111
Q ss_pred HHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 449 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
..... .....+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 253 ~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 297 (327)
T 1fvr_A 253 KLPQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297 (327)
T ss_dssp HGGGT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HhhcC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111 1111222334779999999999999999999999999986
No 141
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=343.03 Aligned_cols=266 Identities=26% Similarity=0.353 Sum_probs=201.2
Q ss_pred HHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhh--ccccccceeeeEeecC---
Q 008828 225 LQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTT--- 299 (552)
Q Consensus 225 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--~~h~niv~l~~~~~~~--- 299 (552)
-....++|.+.+.||+|+||.||+|... ++.||||++.... ...+..|.+++.. ++||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 3445578999999999999999999986 8999999985432 3344556666554 4899999999999877
Q ss_pred -CceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCceEEcCCCCCceeeCCCCceEEcc
Q 008828 300 -TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-----DPKIIHRDVKAANILLDEYYEAVVGD 373 (552)
Q Consensus 300 -~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~D 373 (552)
...++||||+++|+|.+++... .+++..++.++.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred CCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 6789999999999999999765 5999999999999999999999752 34899999999999999999999999
Q ss_pred cccceecCCCCCce---eecccccccccCchhhccCCCCCc------cchhHHHHHHHHHHhCC----------CccccC
Q 008828 374 FGLAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTGQSSEK------TDVFGFGILLLELISGL----------RALEFG 434 (552)
Q Consensus 374 fg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dvws~Gv~l~elltg~----------~p~~~~ 434 (552)
||+++......... .....||+.|+|||.+.+..++.+ +|||||||++|||+||. .||...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 99998764433221 124469999999999988776665 99999999999999994 444322
Q ss_pred cccccccchHHHHHHHhhhcchhhhccccccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 435 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
..... ............. ..+..... ....++..+.+++.+||+.||++|||+.|++++|+.
T Consensus 266 ~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 266 VPSDP---SYEDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp SCSSC---CHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cCCCC---chhhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 11111 1111111111110 11111111 123567889999999999999999999999999986
No 142
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.4e-42 Score=340.47 Aligned_cols=260 Identities=28% Similarity=0.428 Sum_probs=195.6
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
..++|.+.+.||+|+||+||+|... ..||+|+++..... .....+.+|+.+++.++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3467889999999999999999865 35999999754432 2345689999999999999999999965 456689999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCC-
Q 008828 307 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD- 384 (552)
Q Consensus 307 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~- 384 (552)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999963 45799999999999999999999999 99999999999999999999999999997654322
Q ss_pred CceeecccccccccCchhhc---cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 385 SHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||....... ....... .... .
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~-~~~~----~ 244 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD------QIIEMVG-RGSL----S 244 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH------HHHHHHH-HTSC----C
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH------HHHHHhc-cccc----C
Confidence 22233456999999999986 5678899999999999999999999997432211 1111111 1111 1
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 505 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 505 (552)
+.. ......++..+.+++.+||+.||++|||+.|+++.|+...
T Consensus 245 ~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 245 PDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 110 1112234578999999999999999999999999998753
No 143
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-42 Score=353.49 Aligned_cols=274 Identities=20% Similarity=0.260 Sum_probs=208.8
Q ss_pred ccccCHHHHHHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-----ccccc
Q 008828 217 LKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-----HRNLL 290 (552)
Q Consensus 217 ~~~~~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-----h~niv 290 (552)
...+.+++.+...++|.+.+.||+|+||+||+|... +++.||||+++... .....+..|+.++..++ ||||+
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 345555665666789999999999999999999974 68999999996422 22345778999998886 99999
Q ss_pred eeeeEeecCCceeEEEeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC---
Q 008828 291 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--- 365 (552)
Q Consensus 291 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--- 365 (552)
++++++...+..++||||+ +++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 9999999999999999999 899999997543 599999999999999999999999 9999999999999975
Q ss_pred ----------------------CCceEEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHH
Q 008828 366 ----------------------YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 423 (552)
Q Consensus 366 ----------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~e 423 (552)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 789999999999865432 234568999999999999999999999999999999
Q ss_pred HHhCCCccccCcccccccchH--------HHHHHHhhhcchhhhccccccCc--------------------CCHHHHHH
Q 008828 424 LISGLRALEFGKTANQKGAML--------DWVKKIHQEKKLEMLVDKDLKNN--------------------YDRIELEE 475 (552)
Q Consensus 424 lltg~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~ 475 (552)
|+||+.||...........+. .+..................... +.....+.
T Consensus 252 ll~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 999999997533211100000 00000000000000000000000 00011266
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 476 MVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 476 l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
+.+++.+||+.||++|||+.|++++
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcC
Confidence 8899999999999999999999864
No 144
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.9e-42 Score=337.66 Aligned_cols=246 Identities=19% Similarity=0.257 Sum_probs=204.1
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|.+.+.||+|+||+||+|... ++..||+|++..... .....+.+|+.++..++||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 356888999999999999999976 477999999975433 335678999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee---CCCCceEEcccccceecCCCC
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 87 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 999999999998878899999999999999999999999 99999999999999 788999999999998765332
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
......||+.|+|||.+.+. ++.++||||||+++|||+||+.||...... ..........
T Consensus 164 --~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~---------- 223 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS-------EVMLKIREGT---------- 223 (277)
T ss_dssp --CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC----------
T ss_pred --chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCC----------
Confidence 23345699999999998654 899999999999999999999999743221 1111111110
Q ss_pred cCcCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 008828 465 KNNYDR----IELEEMVQVALLCTQYLPSLRPKMSEVVR 499 (552)
Q Consensus 465 ~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 499 (552)
...+. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 224 -~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 224 -FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00111 12467899999999999999999999975
No 145
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.9e-42 Score=339.17 Aligned_cols=249 Identities=25% Similarity=0.363 Sum_probs=184.6
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.++..++||||+++++++......++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 4688889999999999999997 4789999999964321 122456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 307 PYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 307 e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999999999764 5799999999999999999999999 999999999999999999999999999987653222
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......||+.|+|||.+.+..++.++||||||+++|||+||+.||......... ..+.....
T Consensus 168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----------------~~~~~~~~- 229 (278)
T 3cok_A 168 -KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL----------------NKVVLADY- 229 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSSCC-
T ss_pred -cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH----------------HHHhhccc-
Confidence 223356899999999999989999999999999999999999999753321110 00000000
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+...+.++.+++.+||+.||++|||+.+++++
T Consensus 230 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 -EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1122234678999999999999999999999864
No 146
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.1e-42 Score=339.61 Aligned_cols=252 Identities=21% Similarity=0.252 Sum_probs=203.6
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-----chHHHHHHHHHHHhhccccccceeeeEeecCCcee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-----GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~ 303 (552)
++|.+.+.||+|+||.||+|... +++.||+|+++..... .....+.+|+.++.+++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888899999999999999976 6899999999754322 13567899999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC----ceEEccccccee
Q 008828 304 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAKL 379 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~~~~ 379 (552)
+||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||++..
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999998777899999999999999999999999 999999999999999877 899999999987
Q ss_pred cCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhh
Q 008828 380 LDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 459 (552)
Q Consensus 380 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (552)
..... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ........... ..
T Consensus 162 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~---~~ 229 (283)
T 3bhy_A 162 IEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-------QETLTNISAVN---YD 229 (283)
T ss_dssp CC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTTC---CC
T ss_pred ccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-------HHHHHHhHhcc---cC
Confidence 65322 22344589999999999999999999999999999999999999974321 11111111100 00
Q ss_pred ccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 460 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..... ....+..+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 230 FDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred Ccchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 00001 11124678999999999999999999999873
No 147
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-42 Score=350.45 Aligned_cols=252 Identities=20% Similarity=0.289 Sum_probs=202.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|++.+.||+|+||+||+|..+ +++.||+|+++.... ...+|++++.++ +||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 456888999999999999999976 688999999975432 234678888777 7999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC----CceEEcccccceecCC
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY----YEAVVGDFGLAKLLDH 382 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~~~~ 382 (552)
||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||+.++ +.+||+|||+++....
T Consensus 96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 9999999999998888899999999999999999999999 99999999999998533 3599999999987654
Q ss_pred CCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+.... .
T Consensus 173 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~i~~~~-~------ 240 (342)
T 2qr7_A 173 ENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD----TPEEILARIGSGK-F------ 240 (342)
T ss_dssp TTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS----CHHHHHHHHHHCC-C------
T ss_pred CCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC----CHHHHHHHHccCC-c------
Confidence 332 233456899999999998888999999999999999999999999743211 1112222221111 0
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.....+....+..+.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111222345778999999999999999999999864
No 148
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.6e-43 Score=358.80 Aligned_cols=267 Identities=22% Similarity=0.341 Sum_probs=192.0
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc-CchHHHHHHHHHHHhhcc-ccccceeeeEeecCC--ce
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTT--ER 302 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~~~-h~niv~l~~~~~~~~--~~ 302 (552)
..++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 3568999999999999999999965 689999999865422 223446788999999997 999999999997544 68
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
++||||++ |+|..++... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEEecccC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 99999997 5899888764 699999999999999999999999 999999999999999999999999999986532
Q ss_pred CC--------------------CceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCccccccc
Q 008828 383 CD--------------------SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 441 (552)
Q Consensus 383 ~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~ 441 (552)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 241 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLE 241 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 11 112234579999999999986 678999999999999999999999997543221111
Q ss_pred chHHHHHHHhhhcchhhhc------------------cccccCcC------------CHHHHHHHHHHHHHccCCCCCCC
Q 008828 442 AMLDWVKKIHQEKKLEMLV------------------DKDLKNNY------------DRIELEEMVQVALLCTQYLPSLR 491 (552)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~------------~~~~~~~l~~li~~cl~~dP~~R 491 (552)
.+...+. ......+..+. .......+ ....+.++.+|+.+||+.||++|
T Consensus 242 ~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 242 RIIGVID-FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHC-CCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHhcC-CCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 1100000 00000000000 00000000 00224678999999999999999
Q ss_pred CCHHHHHHH
Q 008828 492 PKMSEVVRM 500 (552)
Q Consensus 492 Ps~~evl~~ 500 (552)
||+.|++++
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999999876
No 149
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.3e-42 Score=341.82 Aligned_cols=250 Identities=28% Similarity=0.377 Sum_probs=208.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
+.|.+.+.||+|+||.||+|... +++.||+|+++..........+.+|+.++..++||||+++++++......++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 46888899999999999999864 68999999997665555567899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCcee
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 388 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 388 (552)
+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........ ..
T Consensus 102 ~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 176 (303)
T 3a7i_A 102 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KR 176 (303)
T ss_dssp CTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-CB
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc-cc
Confidence 999999999875 4699999999999999999999999 999999999999999999999999999987654321 22
Q ss_pred ecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcC
Q 008828 389 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 468 (552)
Q Consensus 389 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (552)
....||..|+|||.+.+..++.++||||||+++|+|++|+.||..... .......... ..+.+
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~------~~~~~---- 239 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-------MKVLFLIPKN------NPPTL---- 239 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHS------CCCCC----
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-------HHHHHHhhcC------CCCCC----
Confidence 345689999999999999999999999999999999999999864321 1111111110 01111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 469 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 469 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
+...+..+.+++.+||+.||++|||+.|++++.
T Consensus 240 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 240 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 222346789999999999999999999998753
No 150
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.4e-42 Score=350.94 Aligned_cols=247 Identities=30% Similarity=0.386 Sum_probs=200.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCc--hHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
+.|...+.||+|+||+||+|.. .+++.||||++....... ....+.+|+.++..++||||+++++++......++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477788999999999999996 478999999997543222 2346889999999999999999999999999999999
Q ss_pred eeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 307 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 307 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
||+. |+|.+.+. ....+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 57877775 456799999999999999999999999 9999999999999999999999999999865432
Q ss_pred ceeecccccccccCchhhc---cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 386 HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
....||+.|+|||++. ...++.++|||||||++|||+||+.||..... ...+....... .+
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-------~~~~~~~~~~~------~~ 271 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNE------SP 271 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSC------CC
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhcC------CC
Confidence 2346999999999985 56789999999999999999999999864321 11111111111 01
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
.. .....+..+.+++.+||+.||++|||+.+++++.
T Consensus 272 ~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 272 AL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp CC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 11 1122346789999999999999999999998754
No 151
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.7e-41 Score=333.92 Aligned_cols=258 Identities=20% Similarity=0.240 Sum_probs=205.4
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEe-ecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC-MTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~-~~~~~~~lv~ 306 (552)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+.++..++|++++..++++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46788999999999999999996 5789999999865432 23578999999999998877766665 5566779999
Q ss_pred eeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee---CCCCceEEcccccceecCC
Q 008828 307 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 307 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~~ 382 (552)
||+ +++|.+++. ....+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 899999997 455799999999999999999999999 99999999999999 4889999999999987654
Q ss_pred CCCc------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcch
Q 008828 383 CDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 456 (552)
Q Consensus 383 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (552)
.... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||.................... ....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 239 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-STPI 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-HSCH
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc-CCch
Confidence 4321 12345699999999999999999999999999999999999999985433222222211111111 0000
Q ss_pred hhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 457 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
. .+. ...+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 240 ~-----~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 277 (296)
T 3uzp_A 240 E-----VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp H-----HHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred H-----HHH----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence 0 011 1123679999999999999999999999999986
No 152
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.3e-41 Score=334.37 Aligned_cols=260 Identities=20% Similarity=0.229 Sum_probs=202.9
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEe-ecCCceeEE
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC-MTTTERLLV 305 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~-~~~~~~~lv 305 (552)
..++|.+.+.||+|+||+||+|.. .+++.||||++...... ..+.+|+.++..++|++++..++++ ......++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 357899999999999999999996 57899999987544322 2477899999999988877777665 566778999
Q ss_pred EeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee---CCCCceEEcccccceecC
Q 008828 306 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~ 381 (552)
|||+ +|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 8999999973 45799999999999999999999999 99999999999999 788999999999998765
Q ss_pred CCCCc------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcc
Q 008828 382 HCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 455 (552)
Q Consensus 382 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (552)
..... ......||..|+|||.+.+..++.++|||||||++|||++|+.||.................... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~ 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-STP 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-HSC
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc-cch
Confidence 43321 22345699999999999999999999999999999999999999975443322222211111111 000
Q ss_pred hhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 456 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
... ... ..+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 239 ~~~-----~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 239 IEV-----LCK----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHH-----HTT----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhh-----hhc----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 000 011 1236799999999999999999999999999863
No 153
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=351.88 Aligned_cols=246 Identities=24% Similarity=0.277 Sum_probs=196.0
Q ss_pred CCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEeeccCCC
Q 008828 235 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 313 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 313 (552)
.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|+.++.+++||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 468999999999999964 689999999975432 334578999999999999999999999999999999999999999
Q ss_pred hhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee--CCCCceEEcccccceecCCCCCceeec
Q 008828 314 VASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL--DEYYEAVVGDFGLAKLLDHCDSHVTTA 390 (552)
Q Consensus 314 L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 390 (552)
|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++...... ....
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~ 247 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKV 247 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cccc
Confidence 99988643 4699999999999999999999999 99999999999999 577899999999998765432 2233
Q ss_pred ccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcCCH
Q 008828 391 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDR 470 (552)
Q Consensus 391 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (552)
..||+.|+|||++.+..++.++|||||||++|||+||+.||...... ..+..+..... ........
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~-------~~~~~~~~ 313 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-------ETLNNILACRW-------DLEDEEFQ 313 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCC-------CSCSGGGT
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccC-------CCChhhhc
Confidence 46999999999999999999999999999999999999999753221 11111111110 00000111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 471 IELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 471 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+.++.+++.+||+.||++|||+.|++++
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 234678999999999999999999999974
No 154
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6.4e-43 Score=344.44 Aligned_cols=252 Identities=22% Similarity=0.330 Sum_probs=202.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEECC-C-------cEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCc
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQD-G-------TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~ 301 (552)
++|.+.+.||+|+||+||+|.... + ..||+|++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 567888999999999999998653 3 479999996543 2345578999999999999999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCCC-CCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc--------eEEc
Q 008828 302 RLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--------AVVG 372 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~-l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~kl~ 372 (552)
.++||||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999986554 99999999999999999999999 9999999999999998887 9999
Q ss_pred ccccceecCCCCCceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHh
Q 008828 373 DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 451 (552)
Q Consensus 373 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 451 (552)
|||++..... .....||..|+|||.+.+ ..++.++|||||||++|||+||..|+...... ........
T Consensus 164 Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~------~~~~~~~~ 232 (289)
T 4fvq_A 164 DPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS------QRKLQFYE 232 (289)
T ss_dssp CCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHH
T ss_pred cCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch------HHHHHHhh
Confidence 9999865432 223458899999999987 67999999999999999999976555432211 01111111
Q ss_pred hhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCch
Q 008828 452 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLAE 508 (552)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 508 (552)
... . .+...+..+.+++.+||+.||++|||+.|++++|+....+.
T Consensus 233 ~~~--------~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 233 DRH--------Q----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp TTC--------C----CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ccC--------C----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 000 0 11111356889999999999999999999999999865443
No 155
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3e-42 Score=357.43 Aligned_cols=256 Identities=21% Similarity=0.314 Sum_probs=195.4
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc-------CchHHHHHHHHHHHhhccccccceeeeEeec
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAVHRNLLRLIGFCMT 298 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~ 298 (552)
...++|.+.+.||+|+||+||+|... +++.||||++..... ......+.+|+.++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34578999999999999999999975 589999999965321 111234789999999999999999999975
Q ss_pred CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC---CceEEcccc
Q 008828 299 TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY---YEAVVGDFG 375 (552)
Q Consensus 299 ~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg 375 (552)
....++||||+++|+|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecc
Confidence 455799999999999999998888899999999999999999999999 99999999999999754 459999999
Q ss_pred cceecCCCCCceeecccccccccCchhhcc---CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 376 LAKLLDHCDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 376 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|+||+.||....... .....+.
T Consensus 288 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---~~~~~i~---- 358 (419)
T 3i6u_A 288 HSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQIT---- 358 (419)
T ss_dssp TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC---CHHHHHH----
T ss_pred cceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH---HHHHHHh----
Confidence 99876532 23344669999999999864 578899999999999999999999997432211 1111111
Q ss_pred hcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 453 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
..... ..+... ...+..+.+++.+||+.||++|||+.|++++-
T Consensus 359 ~~~~~--~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 401 (419)
T 3i6u_A 359 SGKYN--FIPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRHP 401 (419)
T ss_dssp TTCCC--CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred cCCCC--CCchhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCCc
Confidence 00000 000000 11246789999999999999999999999754
No 156
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.3e-42 Score=375.25 Aligned_cols=247 Identities=27% Similarity=0.354 Sum_probs=200.0
Q ss_pred CeeeeeCceEEEEEEEC---CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEeeccC
Q 008828 236 NLVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSN 311 (552)
Q Consensus 236 ~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~ 311 (552)
+.||+|+||+||+|.+. .++.||||+++..... .....+.+|+.++.+++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 4678999999764332 234679999999999999999999999964 568899999999
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc--eee
Q 008828 312 GSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH--VTT 389 (552)
Q Consensus 312 g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~ 389 (552)
|+|.+++.....+++..+..|+.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.+...... ...
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999999888899999999999999999999999 9999999999999999999999999999876543322 223
Q ss_pred cccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcC
Q 008828 390 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 468 (552)
Q Consensus 390 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (552)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... .....+... .....
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~----------~~~~~ 593 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKG----------ERMGC 593 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTT----------CCCCC
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcC----------CCCCC
Confidence 3346789999999999999999999999999999998 99999743221 111111111 11122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 469 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 469 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
+..++.++.+++.+||+.||++||++.+|++.|++
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 33445789999999999999999999999999985
No 157
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.9e-42 Score=343.82 Aligned_cols=257 Identities=25% Similarity=0.388 Sum_probs=196.1
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEEC----CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCc
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~ 301 (552)
...++|.+.+.||+|+||.||+|... ++..||+|+++..... .....+.+|+.++.+++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888999999999999999864 3458999999754332 234568899999999999999999999987653
Q ss_pred -----eeEEEeeccCCChhhhhc------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceE
Q 008828 302 -----RLLVYPYMSNGSVASRLK------AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV 370 (552)
Q Consensus 302 -----~~lv~e~~~~g~L~~~l~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 370 (552)
.++||||+++|+|.+++. ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 489999999999999983 345799999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCc-eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHH
Q 008828 371 VGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 448 (552)
Q Consensus 371 l~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 448 (552)
|+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |..||...... ... .
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~---~ 260 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----EMY---D 260 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHH---H
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHH---H
Confidence 9999999866433221 2233457889999999999999999999999999999999 88888643221 111 1
Q ss_pred HHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 449 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
...... ....+...+..+.+++.+||+.||++|||+.+++++|+.
T Consensus 261 ~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 261 YLLHGH----------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HHHTTC----------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHcCC----------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111110 111222334779999999999999999999999999986
No 158
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.8e-42 Score=347.70 Aligned_cols=255 Identities=27% Similarity=0.386 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE------CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCce
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~ 302 (552)
.++|.+.+.||+|+||.||+|.+ .++..||||++..........++.+|+.++..++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999984 247789999997554444556789999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC---CCceEEc
Q 008828 303 LLVYPYMSNGSVASRLKAK-------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVG 372 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~-------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 372 (552)
++||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999754 3589999999999999999999999 9999999999999994 4569999
Q ss_pred ccccceecCCCCC-ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHH
Q 008828 373 DFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKI 450 (552)
Q Consensus 373 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 450 (552)
|||++........ .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||..... .......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~~~ 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLEFV 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-------HHHHHHH
Confidence 9999975533221 12234457899999999999999999999999999999998 8888864321 1111111
Q ss_pred hhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 451 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.... ....+...+..+.+++.+||+.||.+|||+.|++++|+.
T Consensus 259 ~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 259 TSGG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hcCC----------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 1111 111122334678999999999999999999999999986
No 159
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.8e-42 Score=360.76 Aligned_cols=264 Identities=18% Similarity=0.231 Sum_probs=196.1
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc-CchHHHHHHHHHHHhhccccccceeeeEeecC------C
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT------T 300 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~------~ 300 (552)
.++|++.+.||+|+||+||+|... +++.||||++..... .....++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 367888999999999999999965 689999999975422 22345688999999999999999999998654 3
Q ss_pred ceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceec
Q 008828 301 ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 380 (552)
Q Consensus 301 ~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 380 (552)
..++||||+++ +|.+.+.. .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 56999999976 46666654 489999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHH--------H-----
Q 008828 381 DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDW--------V----- 447 (552)
Q Consensus 381 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~--------~----- 447 (552)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+... .
T Consensus 215 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred CCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 532 2334567999999999999999999999999999999999999999754321111000000 0
Q ss_pred --HHHhhh------cchhhhccccccC---cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 448 --KKIHQE------KKLEMLVDKDLKN---NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 448 --~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...... ..........+.. ........++.+|+.+||+.||++|||++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000000000000 0112235789999999999999999999999875
No 160
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.5e-42 Score=344.05 Aligned_cols=261 Identities=21% Similarity=0.266 Sum_probs=205.5
Q ss_pred HHHHHHHhcCCCCC-CeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhcc-ccccceeeeEee
Q 008828 222 FKELQSATSNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAV-HRNLLRLIGFCM 297 (552)
Q Consensus 222 ~~e~~~~~~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~-h~niv~l~~~~~ 297 (552)
+...+...+.|.+. +.||+|+||+||+|... +++.||+|+++..... .....+.+|+.++..+. ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 34444555667766 89999999999999976 6899999999754322 23557889999999884 699999999999
Q ss_pred cCCceeEEEeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC---CCceEEc
Q 008828 298 TTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVG 372 (552)
Q Consensus 298 ~~~~~~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 372 (552)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEe
Confidence 99999999999999999999864 36799999999999999999999999 9999999999999997 7899999
Q ss_pred ccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 373 DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 373 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ........
T Consensus 177 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~ 247 (327)
T 3lm5_A 177 DFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-------ETYLNISQ 247 (327)
T ss_dssp CGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHH
T ss_pred eCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHHHHHh
Confidence 999998765322 223456999999999999999999999999999999999999999643221 11111110
Q ss_pred hcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 453 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
. ............+..+.+++.+||+.||++|||++|++++-
T Consensus 248 ~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 248 V-------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp T-------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCG
T ss_pred c-------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCH
Confidence 0 00111111223346789999999999999999999998753
No 161
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.9e-42 Score=339.24 Aligned_cols=244 Identities=24% Similarity=0.369 Sum_probs=199.5
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc-CchHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv 305 (552)
.++|.+.+.||+|+||+||+|... +++.||+|+++.... ......+.+|+..+..+ +||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 457888999999999999999976 799999999975432 23455688899999988 899999999999999999999
Q ss_pred EeeccCCChhhhhccC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC----------------
Q 008828 306 YPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---------------- 365 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---------------- 365 (552)
|||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999753 6799999999999999999999999 9999999999999984
Q ss_pred ---CCceEEcccccceecCCCCCceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCccccccc
Q 008828 366 ---YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 441 (552)
Q Consensus 366 ---~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~ 441 (552)
...+||+|||.+....... ...||..|+|||.+.+. .++.++|||||||++|+|++|.+++.....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----- 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----- 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-----
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-----
Confidence 4479999999998765432 23489999999999876 567899999999999999999877642211
Q ss_pred chHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 442 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
+ ..... ... ...+...+..+.+++.+||+.||++|||+.|++++
T Consensus 237 ----~-~~~~~-~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 ----W-HEIRQ-GRL---------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ----H-HHHHT-TCC---------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----H-HHHHc-CCC---------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0 11111 111 11222234779999999999999999999999865
No 162
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.9e-43 Score=350.47 Aligned_cols=264 Identities=19% Similarity=0.253 Sum_probs=195.5
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|.+.+.||+|+||+||+|... +++.||||+++...... ....+.+|+.+++.++||||+++++++......++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 357888999999999999999965 68999999997543322 2345779999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee-----CCCCceEEcccccceecC
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL-----DEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill-----~~~~~~kl~Dfg~~~~~~ 381 (552)
||++ |+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 113 e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp ECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred ecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9998 49999999888899999999999999999999999 99999999999999 455669999999998765
Q ss_pred CCCCceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhh--cchhh
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--KKLEM 458 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 458 (552)
.... ......||..|+|||++.+. .++.++|||||||++|||++|+.||........ ........... .....
T Consensus 189 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 189 IPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ---LFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp ------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCTTTSTT
T ss_pred Cccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH---HHHHHHHhCCCchhhhhh
Confidence 3222 23344589999999999875 489999999999999999999999975332111 11111110000 00000
Q ss_pred h-------------ccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 459 L-------------VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 459 ~-------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. ....+........+.++.+++.+||+.||++|||+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0 00000000011134678999999999999999999999874
No 163
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.2e-43 Score=352.52 Aligned_cols=263 Identities=21% Similarity=0.292 Sum_probs=195.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|.+.+.||+|+||+||+|... +++.||+|+++..........+.+|+.++..++||||+++++++......++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888899999999999999976 68999999997544332223456799999999999999999999999999999999
Q ss_pred ccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 309 MSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 309 ~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
++ |+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence 97 5888888754 4699999999999999999999999 99999999999999999999999999998654322 22
Q ss_pred eecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcc---hhhhcc--
Q 008828 388 TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK---LEMLVD-- 461 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-- 461 (552)
.....||..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ...+........ ......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ----LHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCCCTTTSTTGGGCH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCChHhchhhhcch
Confidence 234468999999999876 5689999999999999999999999975432111 111111100000 000000
Q ss_pred -------ccccC----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 462 -------KDLKN----NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 462 -------~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
+.... ......+.++.+++.+||+.||++|||+.|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 00000 00112346789999999999999999999998743
No 164
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-41 Score=343.08 Aligned_cols=267 Identities=23% Similarity=0.307 Sum_probs=208.4
Q ss_pred HHHHHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhh--ccccccceeeeEeecC
Q 008828 222 FKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTT 299 (552)
Q Consensus 222 ~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--~~h~niv~l~~~~~~~ 299 (552)
+.--....++|.+.+.||+|+||+||+|... ++.||||+++.. ....+.+|.+++.. ++||||+++++++...
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3333455678999999999999999999985 899999999643 24467788888877 7899999999999877
Q ss_pred C----ceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCceEEcCCCCCceeeCCCC
Q 008828 300 T----ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEYY 367 (552)
Q Consensus 300 ~----~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~ 367 (552)
. ..++||||+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+|||++.++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence 6 789999999999999999764 5999999999999999999999 66 999999999999999999
Q ss_pred ceEEcccccceecCCCCCc---eeecccccccccCchhhccCC------CCCccchhHHHHHHHHHHhC----------C
Q 008828 368 EAVVGDFGLAKLLDHCDSH---VTTAVRGTVGHIAPEYLSTGQ------SSEKTDVFGFGILLLELISG----------L 428 (552)
Q Consensus 368 ~~kl~Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~Dvws~Gv~l~elltg----------~ 428 (552)
.+||+|||++......... ......||+.|+|||.+.+.. ++.++|||||||++|||+|| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876544332 123446999999999997763 34689999999999999999 5
Q ss_pred CccccCcccccccchHHHHHHHhhhcchhhhccccccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 429 RALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 429 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.||....... .....+....... ...+.+... .....+..+.+++.+||+.||++|||+.||+++|+..
T Consensus 265 ~p~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 265 LPYYDLVPSD--PSVEEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp CTTTTTSCSS--CCHHHHHHHHTTS-----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCccccCcCc--ccHHHHHHHHHHH-----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 5665322211 1111222211111 111111111 1235678899999999999999999999999999863
No 165
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.8e-43 Score=356.06 Aligned_cols=266 Identities=21% Similarity=0.281 Sum_probs=205.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
++|.+.+.||+|+||+||+|... ++..||+|+++..........+.+|+.++..++||||+++++++......++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888899999999999999976 68999999997654444456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCcee
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 388 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 388 (552)
+++|+|.+++.....+++..+..++.|++.||.|||+.. +|+||||||+|||++.++.+||+|||++...... ..
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~ 187 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA 187 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C-
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---cc
Confidence 999999999988778999999999999999999999832 7999999999999999999999999998754321 22
Q ss_pred ecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccch---------------------HHHH
Q 008828 389 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM---------------------LDWV 447 (552)
Q Consensus 389 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~---------------------~~~~ 447 (552)
....||+.|+|||++.+..++.++|||||||++|||+||+.||............ ..+.
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 3346899999999999999999999999999999999999999753321100000 0000
Q ss_pred -HHHhhhcc----hhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 448 -KKIHQEKK----LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 448 -~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
........ ...+.............+.++.+++.+||+.||++|||+.|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000 000000000001111234679999999999999999999999864
No 166
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.2e-42 Score=343.97 Aligned_cols=261 Identities=20% Similarity=0.231 Sum_probs=198.8
Q ss_pred cCCCC-CCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEEE
Q 008828 230 SNFSS-KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~-~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv~ 306 (552)
+.|.+ .+.||+|+||+||+|... +++.||||+++... ......+.+|+.++.++ +||||+++++++...+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 45776 478999999999999954 68999999997543 23455788999999884 7999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc---eEEcccccceecCCC
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLAKLLDHC 383 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~~~~~ 383 (552)
||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++. +||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred EcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 9999999999998877899999999999999999999999 9999999999999998776 999999998765322
Q ss_pred CC------ceeecccccccccCchhhcc-----CCCCCccchhHHHHHHHHHHhCCCccccCcccccccch----HHHHH
Q 008828 384 DS------HVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM----LDWVK 448 (552)
Q Consensus 384 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~----~~~~~ 448 (552)
.. .......||..|+|||.+.. ..++.++|||||||++|||+||+.||............ .....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11223459999999999975 56889999999999999999999999754332211000 00000
Q ss_pred HHhhhcchhhhccccccCcCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 449 KIHQEKKLEMLVDKDLKNNYDR----IELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
.. ...+..... .++. ..+..+.+++.+||+.||++|||+.|++++-
T Consensus 248 ~~-----~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 248 ML-----FESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp HH-----HHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred HH-----HHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 00 000000000 1111 1246789999999999999999999998753
No 167
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.4e-42 Score=337.66 Aligned_cols=247 Identities=24% Similarity=0.374 Sum_probs=205.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.++..++||||+++++++......++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888899999999999999976 57899999996432 1223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 9999999999998777899999999999999999999999 99999999999999999999999999997654322
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... +.
T Consensus 169 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~-------~~---- 229 (284)
T 2vgo_A 169 -RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------ETHRRIVNV-------DL---- 229 (284)
T ss_dssp -BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTT-------CC----
T ss_pred -cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-------HHHHHHhcc-------cc----
Confidence 23456899999999999999999999999999999999999999743211 111111110 01
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.++...+..+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1222334678999999999999999999999863
No 168
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.2e-42 Score=338.67 Aligned_cols=247 Identities=28% Similarity=0.396 Sum_probs=197.3
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC-CceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-TERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~-~~~~lv~e 307 (552)
.++|++.+.||+|+||+||+|... |+.||||+++... ....+.+|+.++.+++||||+++++++... ...++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 356888899999999999999875 8899999997543 345788999999999999999999997654 47899999
Q ss_pred eccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 308 YMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997543 389999999999999999999999 9999999999999999999999999999755422
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +........ .
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-------~~~~~~~~~----------~ 231 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-------DVVPRVEKG----------Y 231 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-------GHHHHHTTT----------C
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHhcC----------C
Confidence 122347889999999999999999999999999999998 99998643211 111111111 1
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 270 (278)
T 1byg_A 232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270 (278)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence 111223345789999999999999999999999999986
No 169
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=346.08 Aligned_cols=248 Identities=16% Similarity=0.191 Sum_probs=201.8
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEE------ECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcc---ccccceeeeEee
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGY------LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV---HRNLLRLIGFCM 297 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~---h~niv~l~~~~~ 297 (552)
...++|.+.+.||+|+||+||+|. ..+++.||||+++... ...+..|+.++..++ |+||+++++++.
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 345678888999999999999994 4468899999996532 345777888877776 999999999999
Q ss_pred cCCceeEEEeeccCCChhhhhc-----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC-------
Q 008828 298 TTTERLLVYPYMSNGSVASRLK-----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE------- 365 (552)
Q Consensus 298 ~~~~~~lv~e~~~~g~L~~~l~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~------- 365 (552)
..+..++||||+++|+|.+++. ....+++..++.|+.||+.||+|||+. +|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999997 356799999999999999999999998 9999999999999998
Q ss_pred ----CCceEEcccccceecCCC-CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccc
Q 008828 366 ----YYEAVVGDFGLAKLLDHC-DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK 440 (552)
Q Consensus 366 ----~~~~kl~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~ 440 (552)
++.+||+|||+++.+... .........||..|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~- 293 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC- 293 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-
Confidence 899999999999865422 23344556799999999999999999999999999999999999999864322110
Q ss_pred cchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhc
Q 008828 441 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLR-PKMSEVVRMLEG 503 (552)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~ 503 (552)
.. ...+.. ++ ..+.+.+++..|++.+|.+| |+++++.+.|+.
T Consensus 294 --------------~~----~~~~~~-~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 294 --------------KP----EGLFRR-LP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp --------------EE----CSCCTT-CS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred --------------ee----chhccc-cC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 00 111111 11 24667889999999999998 567777777765
No 170
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.4e-41 Score=346.25 Aligned_cols=257 Identities=20% Similarity=0.296 Sum_probs=206.7
Q ss_pred HHHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-------hHHHHHHHHHHHhhc-cccccceeeeE
Q 008828 225 LQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-------GEIQFQTEVEMISLA-VHRNLLRLIGF 295 (552)
Q Consensus 225 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~~-~h~niv~l~~~ 295 (552)
.....++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445577999999999999999999985 69999999996543211 133578899999998 79999999999
Q ss_pred eecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccc
Q 008828 296 CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 375 (552)
Q Consensus 296 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 375 (552)
+......++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecC
Confidence 999999999999999999999998777899999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCceeecccccccccCchhhcc------CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHH
Q 008828 376 LAKLLDHCDSHVTTAVRGTVGHIAPEYLST------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 449 (552)
Q Consensus 376 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 449 (552)
++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......
T Consensus 246 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-------~~~~~~ 316 (365)
T 2y7j_A 246 FSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-------ILMLRM 316 (365)
T ss_dssp TCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHH
T ss_pred cccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-------HHHHHH
Confidence 998765432 2334569999999999864 3588999999999999999999999964321 111111
Q ss_pred HhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 450 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..... .. ....... ..+..+.+++.+||+.||++|||+.|++++
T Consensus 317 i~~~~-~~--~~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 IMEGQ-YQ--FSSPEWD----DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHTC-CC--CCHHHHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhCC-CC--CCCcccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11110 00 0000001 123678999999999999999999999874
No 171
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6e-42 Score=337.72 Aligned_cols=248 Identities=25% Similarity=0.376 Sum_probs=199.3
Q ss_pred CCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeec----CCceeE
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTERLL 304 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~----~~~~~l 304 (552)
.|.+.+.||+|+||+||+|... ++..||+|.+...... .....+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3667788999999999999975 6889999999754322 234568899999999999999999998865 345789
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcCCCCCceeeC-CCCceEEcccccceecC
Q 008828 305 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLD-EYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 305 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~ 381 (552)
||||+++|+|.+++.....+++..+..++.|++.||.|||+. + |+||||||+||+++ .++.+||+|||++....
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 999999999999998877899999999999999999999998 7 99999999999998 78999999999997544
Q ss_pred CCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
.. ......||+.|+|||.+. +.++.++|||||||++|+|+||+.||..... .............
T Consensus 184 ~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~------ 247 (290)
T 1t4h_A 184 AS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRVTSGVK------ 247 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHHTTTCC------
T ss_pred cc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc------HHHHHHHHhccCC------
Confidence 32 233456999999999886 4699999999999999999999999964222 1111111111110
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
....+...+..+.+++.+||+.||++|||+.|++++
T Consensus 248 ---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 248 ---PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 011111223678999999999999999999999864
No 172
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.6e-43 Score=342.08 Aligned_cols=254 Identities=24% Similarity=0.340 Sum_probs=203.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEee--cCCceeEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTERLLV 305 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~--~~~~~~lv 305 (552)
++|++.+.||+|+||.||+|... +++.||+|.+...... .....+.+|+.+++.++||||+++++++. .....++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 57888899999999999999975 6899999999754322 23456889999999999999999999875 35678999
Q ss_pred EeeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCc-----eEEcCCCCCceeeCCCCceEEccccc
Q 008828 306 YPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPK-----IIHRDVKAANILLDEYYEAVVGDFGL 376 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfg~ 376 (552)
|||+++|+|.+++.. ...+++..++.++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 999999999999864 34599999999999999999999998 7 99999999999999999999999999
Q ss_pred ceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcch
Q 008828 377 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 456 (552)
Q Consensus 377 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (552)
++...... .......|+..|+|||.+.+..++.++||||||+++|+|+||+.||..... ......+... ..
T Consensus 163 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~-~~ 233 (279)
T 2w5a_A 163 ARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-------KELAGKIREG-KF 233 (279)
T ss_dssp HHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHT-CC
T ss_pred heeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-------HHHHHHHhhc-cc
Confidence 98664322 122334689999999999999999999999999999999999999874321 1111111111 11
Q ss_pred hhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 457 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
...+...+..+.+++.+||+.||++|||+.|+++++...
T Consensus 234 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 234 ---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred ---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 111223347799999999999999999999999887653
No 173
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.6e-42 Score=343.75 Aligned_cols=260 Identities=24% Similarity=0.304 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEee----cCCcee
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM----TTTERL 303 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~----~~~~~~ 303 (552)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 35788899999999999999997 578999999986532 233457889999999999999999999987 344778
Q ss_pred EEEeeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 304 LVYPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
+||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999998864 56799999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCc--------eeecccccccccCchhhccCC---CCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHH
Q 008828 380 LDHCDSH--------VTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 448 (552)
Q Consensus 380 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 448 (552)
....... ......||+.|+|||.+.... ++.++|||||||++|||++|+.||....... ......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~-- 259 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--DSVALA-- 259 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--SCHHHH--
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--chhhHH--
Confidence 4321110 012234799999999987654 6899999999999999999999986321110 001100
Q ss_pred HHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCc
Q 008828 449 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 507 (552)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 507 (552)
.. ...........+..+.+++.+||+.||.+|||+.|++++|+....+
T Consensus 260 -~~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 260 -VQ----------NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -HH----------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred -hh----------ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 00 0011111122346799999999999999999999999999986433
No 174
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.6e-42 Score=363.12 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=205.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|...+.||+|+||.||+|+.+ +|+.||+|+++.... ......+..|+.++..++||||+++++++......++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888899999999999999975 699999999964321 223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 307 PYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 307 e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999864 34699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...........
T Consensus 342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~---~~~~~~~i~~~--------- 408 (543)
T 3c4z_A 342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE---NKELKQRVLEQ--------- 408 (543)
T ss_dssp TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC---HHHHHHHHHHC---------
T ss_pred CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh---HHHHHHHHhhc---------
Confidence 322 23345799999999999999999999999999999999999999975432111 11111111111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKM-----SEVVR 499 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 499 (552)
. ..++...+..+.+++.+||+.||++||++ .++++
T Consensus 409 ~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 409 A--VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp C--CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred c--cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0 11223345788999999999999999976 55654
No 175
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.1e-42 Score=338.97 Aligned_cols=249 Identities=22% Similarity=0.314 Sum_probs=207.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC--chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||.||+|... +++.||+|++...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 56888899999999999999976 5889999998654322 23456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 170 (294)
T 2rku_A 95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 170 (294)
T ss_dssp ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc-
Confidence 9999999999998777899999999999999999999999 999999999999999999999999999987653222
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
......||..|+|||.+.+..++.++||||||+++|+|+||+.||...... ......... . .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~---------~--~ 232 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------ETYLRIKKN---------E--Y 232 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTT---------C--C
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhhc---------c--C
Confidence 233456899999999999989999999999999999999999999743211 111111110 0 0
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+...+..+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1122234678999999999999999999999864
No 176
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=7e-42 Score=335.92 Aligned_cols=244 Identities=25% Similarity=0.390 Sum_probs=202.5
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeec---------
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT--------- 298 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~--------- 298 (552)
..+|++.+.||+|+||.||+|... +++.||+|+++... ..+.+|+.++..++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 456888999999999999999986 78999999997542 246789999999999999999998754
Q ss_pred -------CCceeEEEeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCce
Q 008828 299 -------TTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEA 369 (552)
Q Consensus 299 -------~~~~~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 369 (552)
....++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 3457899999999999999964 35799999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHH
Q 008828 370 VVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 449 (552)
Q Consensus 370 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 449 (552)
||+|||++....... ......||+.|+|||.+.+..++.++||||||+++|||++|..|+.... .+...
T Consensus 162 kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~~~ 230 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---------KFFTD 230 (284)
T ss_dssp EECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---------HHHHH
T ss_pred EECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---------HHHHH
Confidence 999999998765432 2233458999999999999999999999999999999999988875210 11111
Q ss_pred HhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 450 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
. ....+.. ..+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 231 ~---------~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 231 L---------RDGIISD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp H---------HTTCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred h---------hcccccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 1111111 2235688999999999999999999999999863
No 177
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.3e-42 Score=340.48 Aligned_cols=257 Identities=22% Similarity=0.339 Sum_probs=197.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccC--chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.+|.+.+.||+|+||.||+|.. .+|+.||+|+++..... .....+.+|+.++..++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688889999999999999996 47899999999753322 23456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 307 PYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 307 e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999998863 56799999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||..... ............. . +
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~-~-----~ 256 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIEQCD-Y-----P 256 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHHHHTTC-S-----C
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHHhhccc-C-----C
Confidence 222 22334589999999999999999999999999999999999999864321 1112222221111 0 0
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.. .....+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 257 ~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 257 PL---PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp CC---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC---cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 00 1122346799999999999999999999999999874
No 178
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=347.25 Aligned_cols=266 Identities=26% Similarity=0.392 Sum_probs=197.7
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHH--HhhccccccceeeeEeec-----CCc
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEM--ISLAVHRNLLRLIGFCMT-----TTE 301 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~--l~~~~h~niv~l~~~~~~-----~~~ 301 (552)
.++|.+.+.||+|+||+||+|.. +++.||||+++... ...+..|.++ +..++||||+++++++.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 35788889999999999999987 58999999996432 2334444444 456899999999986532 235
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCceEEcCCCCCceeeCCCCceEEcccc
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC------DPKIIHRDVKAANILLDEYYEAVVGDFG 375 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~kl~Dfg 375 (552)
.++||||+++|+|.+++.... .++..+..++.||+.||.|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 689999999999999997654 589999999999999999999863 3389999999999999999999999999
Q ss_pred cceecCCCCC-------ceeecccccccccCchhhcc-------CCCCCccchhHHHHHHHHHHhCCCccccCccccccc
Q 008828 376 LAKLLDHCDS-------HVTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 441 (552)
Q Consensus 376 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~ 441 (552)
+++.+..... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.|+..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9987653221 12234469999999999976 356779999999999999999988876543322211
Q ss_pred chH----------HHHHHHhhhcchhhhccccccCc--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 442 AML----------DWVKKIHQEKKLEMLVDKDLKNN--YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 442 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
... ........... ..+.+... .....+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HhhhcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 111 00111100000 01111111 1234567899999999999999999999999999873
No 179
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.5e-41 Score=352.10 Aligned_cols=200 Identities=25% Similarity=0.332 Sum_probs=168.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecC-----Cc
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TE 301 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~-----~~ 301 (552)
.++|.+.+.||+|+||+||+|... +++.||||+++..... ....++.+|+.+++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357889999999999999999975 5889999999754322 2345788999999999999999999998766 56
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
.++||||+. |+|.+++.....+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 899999996 59999999888899999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc---------------------eeecccccccccCchhh-ccCCCCCccchhHHHHHHHHHHhCCCccc
Q 008828 382 HCDSH---------------------VTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELISGLRALE 432 (552)
Q Consensus 382 ~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dvws~Gv~l~elltg~~p~~ 432 (552)
..... ......||+.|+|||++ ....++.++|||||||++|||++|..|+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 33211 12456799999999986 55679999999999999999998655543
No 180
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-41 Score=357.27 Aligned_cols=194 Identities=23% Similarity=0.354 Sum_probs=155.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecC-----Cce
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TER 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~-----~~~ 302 (552)
++|.+.+.||+|+||+||+|+.. +++.||||++...... ....++.+|+.++..++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57899999999999999999965 6899999999654322 2345788999999999999999999998543 568
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
++||||+. |+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999985 69999998888899999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC--------------------------ceeecccccccccCchhh-ccCCCCCccchhHHHHHHHHHHhC
Q 008828 383 CDS--------------------------HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELISG 427 (552)
Q Consensus 383 ~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dvws~Gv~l~elltg 427 (552)
... .......||+.|+|||++ ....++.++|||||||++|||+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 211 122345689999999986 456799999999999999999994
No 181
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=7.5e-43 Score=357.37 Aligned_cols=241 Identities=12% Similarity=0.097 Sum_probs=190.1
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCc--cCchHHHHHHHHH---HHhhccccccceee-------eE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGN--AIGGEIQFQTEVE---MISLAVHRNLLRLI-------GF 295 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~---~l~~~~h~niv~l~-------~~ 295 (552)
.++|.+.+.||+|+||+||+|.. .+|+.||||+++... .......+.+|+. .++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788889999999999999996 469999999997432 2234567889994 55566899999998 55
Q ss_pred eecCC-----------------ceeEEEeeccCCChhhhhccCCCCC-------HHHHHHHHHHHHHHHHHHhhcCCCce
Q 008828 296 CMTTT-----------------ERLLVYPYMSNGSVASRLKAKPSLD-------WATRKRIALGAARGLLYLHEQCDPKI 351 (552)
Q Consensus 296 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~l~-------~~~~~~i~~~ia~~l~~LH~~~~~~i 351 (552)
+...+ ..++||||+ +|+|.+++.....++ +..+..|+.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 689999997544344 488889999999999999999 99
Q ss_pred EEcCCCCCceeeCCCCceEEcccccceecCCCCCceeecccccccccCchhhccC-----------CCCCccchhHHHHH
Q 008828 352 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-----------QSSEKTDVFGFGIL 420 (552)
Q Consensus 352 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dvws~Gv~ 420 (552)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 3344567 999999999887 89999999999999
Q ss_pred HHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 421 LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 421 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
+|||+||+.||........ ...+... .. ..+..+.+++.+||+.||++|||+.|++++
T Consensus 303 l~elltg~~Pf~~~~~~~~----------------~~~~~~~--~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG----------------SEWIFRS--CK----NIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHSSCCC------CC----------------SGGGGSS--CC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHCCCCCcccccccc----------------hhhhhhh--cc----CCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 9999999999964332111 1111110 01 123678999999999999999999999863
No 182
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6.2e-42 Score=344.31 Aligned_cols=267 Identities=22% Similarity=0.317 Sum_probs=202.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|.+.+.||+|+||.||+|... +++.||||++....... ....+.+|+.++..++||||+++++++......++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 46888899999999999999976 58999999986543322 23457899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCce
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 387 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 387 (552)
|+++++|..++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 180 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EV 180 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-cc
Confidence 999999999887777899999999999999999999999 99999999999999999999999999998654322 22
Q ss_pred eecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccccchH--------HHHHHHhhhcchhh
Q 008828 388 TTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML--------DWVKKIHQEKKLEM 458 (552)
Q Consensus 388 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 458 (552)
.....||..|+|||.+.+. .++.++|||||||++|+|++|+.||...........+. .+............
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 3345689999999999875 78999999999999999999999997543221110000 00000011111111
Q ss_pred hccccccCcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 459 LVDKDLKNNY-----DRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 459 ~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+...... .+..++.+.+++.+||+.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111111111 11235789999999999999999999999863
No 183
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.7e-42 Score=345.73 Aligned_cols=249 Identities=22% Similarity=0.309 Sum_probs=206.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC--chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||.||++... +++.||+|++...... .....+.+|+.++..++||||+++++++...+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 56778899999999999999976 5789999998654322 23456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++++|.+++.....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 196 (335)
T 2owb_A 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 196 (335)
T ss_dssp CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-
Confidence 9999999999998777899999999999999999999999 999999999999999999999999999987653222
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
......||..|+|||.+.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~-------~---- 258 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KETYLRIKKNE-------Y---- 258 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTC-------C----
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHhcCC-------C----
Confidence 23345689999999999999999999999999999999999999974321 11111111110 0
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+......+.+++.+||+.||++|||+.|++++
T Consensus 259 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112233678999999999999999999999863
No 184
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-42 Score=347.88 Aligned_cols=257 Identities=17% Similarity=0.196 Sum_probs=202.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEECC---------CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccce---------
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQD---------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR--------- 291 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~--------- 291 (552)
++|.+.+.||+|+||.||+|.... ++.||+|++... ..+.+|+.++.+++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 578889999999999999999763 789999999653 25779999999999999998
Q ss_pred ------eeeEeec-CCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCcee
Q 008828 292 ------LIGFCMT-TTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANIL 362 (552)
Q Consensus 292 ------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 362 (552)
+++++.. ....++||||+ +|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 5677765 67889999999 99999999865 6899999999999999999999999 9999999999999
Q ss_pred eCCCC--ceEEcccccceecCCCCCc------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccC
Q 008828 363 LDEYY--EAVVGDFGLAKLLDHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFG 434 (552)
Q Consensus 363 l~~~~--~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~ 434 (552)
++.++ .+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999866432211 123346999999999999999999999999999999999999999753
Q ss_pred cccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 435 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
.... ..+......... ....+.+.... ....+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 272 ~~~~--~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 272 LPNT--EDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp TTCH--HHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred CcCH--HHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 3111 111111111111 11111111100 01123779999999999999999999999999986
No 185
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.1e-42 Score=363.04 Aligned_cols=251 Identities=25% Similarity=0.352 Sum_probs=206.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||+||+|... +++.||||++..... ......+.+|+.++++++||||+++++++......++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888899999999999999976 789999999965432 234567899999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee---CCCCceEEcccccceecCCC
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~~~ 383 (552)
||+.+|+|.+.+.....+++..+..++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 182 (484)
T 3nyv_A 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182 (484)
T ss_dssp CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence 9999999999998888899999999999999999999999 99999999999999 56789999999999876543
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
. ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ...+..+......
T Consensus 183 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~------- 245 (484)
T 3nyv_A 183 K--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-------YDILKKVEKGKYT------- 245 (484)
T ss_dssp C--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCC-------
T ss_pred c--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCC-------
Confidence 2 2334569999999999866 699999999999999999999999974322 1111111111100
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.........+..+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 246 FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0000112234678999999999999999999999863
No 186
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-41 Score=361.83 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=202.3
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC------------chHHHHHHHHHHHhhccccccceeeeE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI------------GGEIQFQTEVEMISLAVHRNLLRLIGF 295 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~e~~~l~~~~h~niv~l~~~ 295 (552)
.++|.+.+.||+|+||+||+|... +++.||+|+++..... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999975 5789999999754321 234568899999999999999999999
Q ss_pred eecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC---ceEEc
Q 008828 296 CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVVG 372 (552)
Q Consensus 296 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 372 (552)
+......++||||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999999999998777899999999999999999999999 999999999999999775 69999
Q ss_pred ccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 373 DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 373 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||..... ......+..
T Consensus 192 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~ 261 (504)
T 3q5i_A 192 DFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-------QDIIKKVEK 261 (504)
T ss_dssp CCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH
T ss_pred ECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHc
Confidence 999998765432 233456999999999986 5689999999999999999999999974322 111122111
Q ss_pred hcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 453 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.... .+.... ...+.++.+++.+||+.||.+|||+.|++++
T Consensus 262 ~~~~---~~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYY---FDFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCC---CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCC---CCcccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1100 000000 1123678999999999999999999999864
No 187
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.5e-42 Score=334.86 Aligned_cols=248 Identities=22% Similarity=0.339 Sum_probs=197.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||.||+|... +++.||||+++... .......+.+|+.+++.++||||+++++++......++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888899999999999999976 68999999996432 2223457889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 9999999999998777899999999999999999999999 99999999999999999999999999998664322
Q ss_pred eeecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... ...........
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~----------- 227 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------PTLFKKIRGGV----------- 227 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-----------
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHhhcCc-----------
Confidence 2234468999999999988765 6899999999999999999999964321 11111111110
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+...+..+.+++.+||+.||++|||+.|++++
T Consensus 228 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 01122234678999999999999999999999974
No 188
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.9e-42 Score=343.37 Aligned_cols=261 Identities=27% Similarity=0.371 Sum_probs=187.0
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
...++|.+.+.||+|+||.||+|... +++.||||++...........+.+|+.++..++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34578999999999999999999854 68999999997554444455788999999999999999999999999999999
Q ss_pred EeeccCCChhhhhcc--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccc
Q 008828 306 YPYMSNGSVASRLKA--------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA 377 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 377 (552)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999863 45699999999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCC----ceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 378 KLLDHCDS----HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 378 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
........ .......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||....... . .......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~--~~~~~~~ 242 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK----V--LMLTLQN 242 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----H--HHHHHTS
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh----H--HHHHhcc
Confidence 76543221 12234568999999999876 568999999999999999999999997533211 0 0011110
Q ss_pred hc-ch-hhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 453 EK-KL-EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 453 ~~-~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.. .. ....+.... ...+..+.+++.+||+.||.+|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 243 DPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp SCCCTTC-----CCC----CCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCccccccccchhh----hhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 00 001111111 1233678999999999999999999999864
No 189
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-41 Score=361.01 Aligned_cols=251 Identities=22% Similarity=0.315 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc-CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|.+.+.||+|+||+||+|... ++..||+|+++.... ......+.+|+.+++.++||||+++++++......++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46888899999999999999976 688999999975432 2234578899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC---CCceEEcccccceecCCCC
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~~~~~~~~ 384 (552)
|+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~ 193 (494)
T 3lij_A 117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193 (494)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence 999999999998777899999999999999999999999 9999999999999976 4559999999998765432
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
......||+.|+|||++. ..++.++|||||||++|+|++|+.||..... ............ ..+...
T Consensus 194 --~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~---~~~~~~ 260 (494)
T 3lij_A 194 --KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-------QEILRKVEKGKY---TFDSPE 260 (494)
T ss_dssp --CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCC---CCCSGG
T ss_pred --cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCC---CCCchh
Confidence 233456999999999986 5699999999999999999999999974322 111122111110 001111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. ...+..+.+++.+||+.||.+|||+.|++++
T Consensus 261 ~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 W----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp G----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred c----ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1 1234678999999999999999999999853
No 190
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.3e-42 Score=350.74 Aligned_cols=274 Identities=19% Similarity=0.223 Sum_probs=200.3
Q ss_pred HHHHHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCc----------hHHHHHHHHHHHhhccccccce
Q 008828 222 FKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG----------GEIQFQTEVEMISLAVHRNLLR 291 (552)
Q Consensus 222 ~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~~~h~niv~ 291 (552)
..++....++|.+.+.||+|+||.||+|...+|+.||||++....... ....+.+|+.++.+++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 467778889999999999999999999998889999999996432211 1256899999999999999999
Q ss_pred eeeEeec-----CCceeEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC
Q 008828 292 LIGFCMT-----TTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE 365 (552)
Q Consensus 292 l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~ 365 (552)
+++++.. ....++||||+. |+|.+.+.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcC
Confidence 9999854 335799999998 578777764 34799999999999999999999999 9999999999999999
Q ss_pred CCceEEcccccceecCCCCCceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchH
Q 008828 366 YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML 444 (552)
Q Consensus 366 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~ 444 (552)
++.+||+|||+++..... .......||..|+|||.+.+ ..++.++|||||||++|+|+||+.||...........+.
T Consensus 170 ~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 170 NNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp TCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred CCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999999999754322 22334568999999999877 678999999999999999999999997543211110000
Q ss_pred HHHHHH-------hhhcchhhhcccccc-------CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 445 DWVKKI-------HQEKKLEMLVDKDLK-------NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 445 ~~~~~~-------~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
...... ............... .......+..+.+++.+||+.||++|||+.|++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 318 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCc
Confidence 000000 000000000000000 001122346789999999999999999999998753
No 191
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.1e-42 Score=373.46 Aligned_cols=251 Identities=23% Similarity=0.280 Sum_probs=207.6
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc--cCchHHHHHHHHHHHhhc-cccccceeeeEeecCCcee
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~ 303 (552)
..++|++.+.||+|+||+||+|... +++.||||+++... .......+..|..++..+ +||+|+++++++...+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4567889999999999999999975 58899999997532 122344677899999877 7999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCC
Q 008828 304 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 383 (552)
+||||+++|+|..++.....+++..+..|+.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999999999877899999999999999999999999 9999999999999999999999999999864332
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+. ...
T Consensus 496 ~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-------~~~~~~i~---------~~~ 558 (674)
T 3pfq_A 496 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIM---------EHN 558 (674)
T ss_dssp T-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHH---------SSC
T ss_pred C-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-------HHHHHHHH---------hCC
Confidence 2 234456799999999999999999999999999999999999999975322 11111111 111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKM-----SEVVRM 500 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 500 (552)
..++...+.++.+|+.+||+.||++||++ +||+++
T Consensus 559 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 559 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred --CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 12233445789999999999999999998 666643
No 192
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-42 Score=347.94 Aligned_cols=262 Identities=22% Similarity=0.287 Sum_probs=196.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCC------c
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT------E 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~------~ 301 (552)
++|.+.+.||+|+||.||+|... +|+.||||++...... ....++.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 56888899999999999999974 6899999999654322 22456889999999999999999999987653 4
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
.++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 59999999 7899999876 4699999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHH--------HHHHHhh
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--------WVKKIHQ 452 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~--------~~~~~~~ 452 (552)
.. .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||...........+.. +...+..
T Consensus 180 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 180 SE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp SS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred cc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 32 234568999999999987 6799999999999999999999999975432111000000 0000000
Q ss_pred h---c---chhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 453 E---K---KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 453 ~---~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
. . .+.......+ .......+..+.+++.+||+.||++|||+.|++++-
T Consensus 256 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp HHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 0 0 0000000000 011122347789999999999999999999999853
No 193
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=340.76 Aligned_cols=265 Identities=23% Similarity=0.348 Sum_probs=206.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-----CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCC--ce
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--ER 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~--~~ 302 (552)
++|.+.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|+.+++.++||||+++++++.... ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 5678889999999999999984 368899999997542 334457899999999999999999999987654 67
Q ss_pred eEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 303 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 8999999999999999764 4699999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCce--eecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccc----cccchHHHHHHHhhhcc
Q 008828 382 HCDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTAN----QKGAMLDWVKKIHQEKK 455 (552)
Q Consensus 382 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~ 455 (552)
...... .....++..|+|||.+.+..++.++||||||+++|||+||..|+....... .......+.. ..
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 271 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV-----FH 271 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHH-----HH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhH-----HH
Confidence 433321 123347788999999999899999999999999999999998886321100 0000000000 00
Q ss_pred hhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 008828 456 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 503 (552)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 503 (552)
+...+........+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 011111111112233345789999999999999999999999999986
No 194
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=347.79 Aligned_cols=251 Identities=24% Similarity=0.287 Sum_probs=184.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-ccccceeeeEee--------c
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCM--------T 298 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~niv~l~~~~~--------~ 298 (552)
..+|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++.++. ||||+++++++. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 357888899999999999999975 68999999985543 233456889999999996 999999999984 3
Q ss_pred CCceeEEEeeccCCChhhhhcc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcCCCCCceeeCCCCceEEcc
Q 008828 299 TTERLLVYPYMSNGSVASRLKA---KPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGD 373 (552)
Q Consensus 299 ~~~~~lv~e~~~~g~L~~~l~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~D 373 (552)
....++||||+. |+|.+++.. ...+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 344789999996 699888763 55799999999999999999999998 7 99999999999999999999999
Q ss_pred cccceecCCCCCce-----------eecccccccccCchhh---ccCCCCCccchhHHHHHHHHHHhCCCccccCccccc
Q 008828 374 FGLAKLLDHCDSHV-----------TTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ 439 (552)
Q Consensus 374 fg~~~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~ 439 (552)
||+++......... .....||+.|+|||.+ .+..++.++|||||||++|||+||+.||.......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~- 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR- 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence 99998765432211 1134589999999998 56678999999999999999999999996432110
Q ss_pred ccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 440 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
+.............+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 261 -------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 261 -------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred -------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0000000001111224578999999999999999999999999864
No 195
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.4e-42 Score=345.06 Aligned_cols=251 Identities=21% Similarity=0.296 Sum_probs=198.6
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHH-HhhccccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEM-ISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|.+.+.||+|+||+||+|.. .+|+.||||+++.........++..|..+ +..++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45788889999999999999997 46899999999765444444556666665 67889999999999999999999999
Q ss_pred eeccCCChhhhhc----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 307 PYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 307 e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
||+++ +|.+++. ....+++..+..++.||+.||.|||++. +|+||||||+|||++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 8888875 4568999999999999999999999742 899999999999999999999999999986642
Q ss_pred CCCceeecccccccccCchhhcc----CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhh
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLST----GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 458 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (552)
. .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... ...+........
T Consensus 207 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~--- 275 (340)
T 3an0_A 207 S--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPS--- 275 (340)
T ss_dssp H--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCC---
T ss_pred c--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------HHHHHHHhcCCC---
Confidence 1 12223469999999999743 47899999999999999999999999742211 111111111110
Q ss_pred hccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 008828 459 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 499 (552)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 499 (552)
+.. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 276 ---~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 ---PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ---CCC---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCC---CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 000 11123467999999999999999999999986
No 196
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.9e-41 Score=339.17 Aligned_cols=257 Identities=17% Similarity=0.246 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-ccccceeeeEeec--CCceeEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMT--TTERLLV 305 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~niv~l~~~~~~--~~~~~lv 305 (552)
++|++.+.||+|+||+||+|.. .+++.||||+++... ...+.+|+.++..++ ||||+++++++.. ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 5688889999999999999986 468999999996432 456889999999997 9999999999987 5678999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC-ceEEcccccceecCCCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY-EAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~~ 384 (552)
|||+++++|.+++. .+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 112 ~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp EECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred EeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999999999885 389999999999999999999999 999999999999999776 89999999998765432
Q ss_pred CceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhc---------
Q 008828 385 SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK--------- 454 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 454 (552)
. .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .+...........
T Consensus 186 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 186 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH--HHHHHHHHHCHHHHHHHHHHTT
T ss_pred c--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH--HHHHHHHhcCCchhhhHHHHhc
Confidence 2 234468999999999987 6789999999999999999999999964332111 0111111000000
Q ss_pred -----chhhhcc--------ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 455 -----KLEMLVD--------KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 455 -----~~~~~~~--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
....... ...........+.++.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000 000011112235789999999999999999999999975
No 197
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.4e-41 Score=356.72 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=203.8
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc-cCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN-AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|.+.+.||+|+||+||+|... +++.||||+++... .......+.+|+.++.+++||||+++++++......++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 56888999999999999999975 68999999996432 22335678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC---CCCceEEcccccceecCCCC
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|+.+|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++......
T Consensus 102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 999999999998777899999999999999999999999 999999999999995 56689999999998664322
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+...... .+
T Consensus 179 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~---~~--- 242 (486)
T 3mwu_A 179 --KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETGKYA---FD--- 242 (486)
T ss_dssp -----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCC---SC---
T ss_pred --ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC---CC---
Confidence 2334569999999999875 599999999999999999999999974321 1111221111100 00
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.......+..+.+++.+||+.||++|||+.|++++
T Consensus 243 -~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 -LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00112234678999999999999999999999975
No 198
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.9e-42 Score=339.05 Aligned_cols=255 Identities=29% Similarity=0.369 Sum_probs=196.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC--CCc--EEEEEEeccCcc--CchHHHHHHHHHHHhhccccccceeeeEeecCCcee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ--DGT--VVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~ 303 (552)
++|++.+.||+|+||+||+|.+. +++ .||||+++.... ......+.+|+.++..++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888899999999999999863 233 689999875432 233457899999999999999999999998754 88
Q ss_pred EEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 304 LVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
+||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999998753 5699999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCce--eecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhh
Q 008828 383 CDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 459 (552)
Q Consensus 383 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (552)
..... .....+|..|+|||.+.+..++.++||||||+++|+|++ |+.||..... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~----- 241 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQILHKIDKEG----- 241 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTSC-----
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-------HHHHHHHHccC-----
Confidence 43321 223457889999999999889999999999999999999 9999864321 11111111111
Q ss_pred ccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 460 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
.....+...+..+.+++.+||+.||++|||+.+++++|+..
T Consensus 242 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 242 ----ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 11111223447799999999999999999999999999864
No 199
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-41 Score=344.77 Aligned_cols=266 Identities=23% Similarity=0.280 Sum_probs=198.7
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc----hHHHHHHHHHHHhhccccccceeeeEeecCCce
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~ 302 (552)
..++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.++..++||||+++++++......
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4568999999999999999999975 58999999997532211 123678999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 303 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
++||||+++ +|..++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999986 888887654 4699999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
... .......||+.|+|||.+.+. .++.++|||||||++|||++|..||........ +........ ........
T Consensus 164 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~---~~~i~~~~~-~~~~~~~~ 238 (346)
T 1ua2_A 164 SPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ---LTRIFETLG-TPTEEQWP 238 (346)
T ss_dssp SCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHC-CCCTTTSS
T ss_pred CCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHHHcC-CCChhhhh
Confidence 322 223345689999999999764 589999999999999999999998865332111 111111110 00000000
Q ss_pred ------cc---cccCcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 008828 461 ------DK---DLKNNY-----DRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 502 (552)
Q Consensus 461 ------~~---~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 502 (552)
+. ...... ....+..+.+++.+||+.||++|||+.|++++--
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 00 000000 1223478999999999999999999999997643
No 200
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.6e-42 Score=336.46 Aligned_cols=251 Identities=20% Similarity=0.249 Sum_probs=186.1
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHH-HHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|++.+.||+|+||+||+|... +++.||+|+++.........+ +.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 457888999999999999999974 789999999976533333333 444555578889999999999999999999999
Q ss_pred eeccCCChhhhhc----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 307 PYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 307 e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
||+++ +|.+++. ....+++..+..++.|++.||.|||+++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99974 8877664 4568999999999999999999999853 899999999999999999999999999986643
Q ss_pred CCCceeecccccccccCchhh----ccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhh
Q 008828 383 CDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 458 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (552)
.. ......||+.|+|||.+ .+..++.++|||||||++|||+||+.||...... ...+.......
T Consensus 163 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~---- 230 (290)
T 3fme_A 163 DV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEP---- 230 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSC----
T ss_pred cc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch------HHHHHHHhccC----
Confidence 22 22334599999999996 5567899999999999999999999999642211 11111111111
Q ss_pred hccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 008828 459 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 499 (552)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 499 (552)
.........+..+.+++.+||+.||++|||+.|+++
T Consensus 231 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 231 -----SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -----CCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----CCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 001111223467899999999999999999999986
No 201
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1e-41 Score=338.46 Aligned_cols=251 Identities=22% Similarity=0.329 Sum_probs=204.4
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|.+.+.||+|+||+||+|... +|+.||+|+++.... .....+.+|+.++..++||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 356888899999999999999975 689999999975432 223468899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee---CCCCceEEcccccceecCCCC
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCD 384 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~~~~ 384 (552)
|+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 87 LVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred cCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 999999999998777899999999999999999999999 99999999999999 78899999999999754322
Q ss_pred CceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccc
Q 008828 385 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 464 (552)
Q Consensus 385 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (552)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.... . ..
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~-~------~~ 226 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-------SKLFEKIKEGY-Y------EF 226 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHCC-C------CC
T ss_pred --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-C------CC
Confidence 22334589999999999999999999999999999999999999964321 11111111110 0 00
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 465 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 465 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
........+..+.+++.+||+.||++|||+.|++++
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111122334779999999999999999999999873
No 202
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.7e-41 Score=338.30 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=198.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc-------CchHHHHHHHHHHHhhccccccceeeeEeecCC
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 300 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~ 300 (552)
.++|.+.+.||+|+||.||+|... +++.||||+++.... ......+.+|+.++..++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457889999999999999999975 588999999964321 112235889999999999999999999987654
Q ss_pred ceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc---eEEcccccc
Q 008828 301 ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLA 377 (552)
Q Consensus 301 ~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~ 377 (552)
.++||||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred -eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 899999999999999998888899999999999999999999999 9999999999999987654 999999999
Q ss_pred eecCCCCCceeecccccccccCchhhc---cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhc
Q 008828 378 KLLDHCDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 454 (552)
Q Consensus 378 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 454 (552)
+..... .......||..|+|||++. ...++.++|||||||++|+|++|+.||....... .....+.. .
T Consensus 165 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~----~ 235 (322)
T 2ycf_A 165 KILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQITS----G 235 (322)
T ss_dssp EECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS---CHHHHHHH----T
T ss_pred eecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH---HHHHHHHh----C
Confidence 876432 2223456899999999974 4678999999999999999999999997433211 11111111 0
Q ss_pred chhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 455 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
... ..+... ...+..+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~--~~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 236 KYN--FIPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCC--CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccc--cCchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 000 000011 1124678999999999999999999999864
No 203
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=332.37 Aligned_cols=250 Identities=21% Similarity=0.303 Sum_probs=198.0
Q ss_pred CCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEeec
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 309 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 309 (552)
+|....+||+|+||.||+|... +++.||||.++... ......+.+|+.++..++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455569999999999999964 68899999997543 233456889999999999999999999999999999999999
Q ss_pred cCCChhhhhccC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC-CCceEEcccccceecCCCCC
Q 008828 310 SNGSVASRLKAK---PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-YYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 310 ~~g~L~~~l~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~ 385 (552)
++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999999754 3567899999999999999999999 9999999999999987 89999999999987653221
Q ss_pred ceeecccccccccCchhhccCC--CCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
......||..|+|||.+.+.. ++.++||||||+++|+|+||+.||....... ........ . .
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~-~---------~ 242 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-----AAMFKVGM-F---------K 242 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-----HHHHHHHH-H---------C
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-----HHHHhhcc-c---------c
Confidence 223456899999999997654 8899999999999999999999996422110 00000000 0 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.....+...+..+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 243 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1112223344778999999999999999999999864
No 204
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.4e-42 Score=351.21 Aligned_cols=261 Identities=20% Similarity=0.284 Sum_probs=196.1
Q ss_pred HHHhcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC-----
Q 008828 226 QSATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT----- 299 (552)
Q Consensus 226 ~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~----- 299 (552)
+...++|.+.+.||+|+||+||+|.. .+|+.||||++...... ..+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 34567899999999999999999996 47899999998654322 23799999999999999999998543
Q ss_pred ---------------------------------CceeEEEeeccCCChhhhhc----cCCCCCHHHHHHHHHHHHHHHHH
Q 008828 300 ---------------------------------TERLLVYPYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLY 342 (552)
Q Consensus 300 ---------------------------------~~~~lv~e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~ia~~l~~ 342 (552)
...++||||+++ +|.+.+. ....+++..+..++.||++||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 337899999984 7766664 45689999999999999999999
Q ss_pred HhhcCCCceEEcCCCCCceeeC-CCCceEEcccccceecCCCCCceeecccccccccCchhhccC-CCCCccchhHHHHH
Q 008828 343 LHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGIL 420 (552)
Q Consensus 343 LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~ 420 (552)
||+. +|+||||||+|||++ .++.+||+|||+++...... ......||..|+|||.+.+. .++.++|||||||+
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9998 999999999999998 68999999999998765332 22344689999999998775 48999999999999
Q ss_pred HHHHHhCCCccccCcccccccchHHHHHHHhhh---------cchhh-----hccccccCcCCHHHHHHHHHHHHHccCC
Q 008828 421 LLELISGLRALEFGKTANQKGAMLDWVKKIHQE---------KKLEM-----LVDKDLKNNYDRIELEEMVQVALLCTQY 486 (552)
Q Consensus 421 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~ 486 (552)
+|||++|+.||........ +...+...... ..... +........++...+..+.+++.+||+.
T Consensus 232 l~ell~g~~pf~~~~~~~~---~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQ---LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 9999999999975432211 11111110000 00000 0001111112233457799999999999
Q ss_pred CCCCCCCHHHHHHH
Q 008828 487 LPSLRPKMSEVVRM 500 (552)
Q Consensus 487 dP~~RPs~~evl~~ 500 (552)
||++|||+.|++++
T Consensus 309 dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 309 EPDLRINPYEAMAH 322 (383)
T ss_dssp SGGGSCCHHHHHTS
T ss_pred ChhhCCCHHHHhcC
Confidence 99999999999864
No 205
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.4e-41 Score=344.18 Aligned_cols=259 Identities=20% Similarity=0.300 Sum_probs=205.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCch----------------HHHHHHHHHHHhhcccccccee
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGG----------------EIQFQTEVEMISLAVHRNLLRL 292 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------~~~~~~e~~~l~~~~h~niv~l 292 (552)
.++|.+.+.||+|+||.||+|.. +++.||||++........ ...+.+|+.++..++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999999 899999999964322111 1678999999999999999999
Q ss_pred eeEeecCCceeEEEeeccCCChhhh------hcc--CCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceEEcCCCCCceee
Q 008828 293 IGFCMTTTERLLVYPYMSNGSVASR------LKA--KPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILL 363 (552)
Q Consensus 293 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~--~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill 363 (552)
++++...+..++||||+++|+|.++ +.. ...+++..+..++.|++.||.|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998 665 5689999999999999999999998 8 99999999999999
Q ss_pred CCCCceEEcccccceecCCCCCceeecccccccccCchhhccC-CCCC-ccchhHHHHHHHHHHhCCCccccCccccccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSE-KTDVFGFGILLLELISGLRALEFGKTANQKG 441 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~ 441 (552)
+.++.+||+|||.+...... ......||..|+|||.+.+. .++. ++|||||||++|||++|+.||......
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 99999999999999876432 33445699999999999887 6666 999999999999999999999753321
Q ss_pred chHHHHHHHhhhcchhhhcc------c---cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 442 AMLDWVKKIHQEKKLEMLVD------K---DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
.......... ......+ + ..........+..+.+++.+||+.||.+|||+.|++++-
T Consensus 259 --~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 259 --VELFNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp --HHHHHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred --HHHHHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 1111111111 0000000 0 000000123457889999999999999999999999743
No 206
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.4e-41 Score=344.50 Aligned_cols=263 Identities=23% Similarity=0.326 Sum_probs=199.4
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecC--------
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTT-------- 299 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~-------- 299 (552)
++|.+.+.||+|+||+||+|.. .+|+.||+|++....... ....+.+|+.++..++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688899999999999999997 478999999986543322 344678999999999999999999998763
Q ss_pred CceeEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccce
Q 008828 300 TERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 378 (552)
Q Consensus 300 ~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 378 (552)
...++||||+++ +|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 467899999986 66666654 45799999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC---ceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhc
Q 008828 379 LLDHCDS---HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 454 (552)
Q Consensus 379 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 454 (552)
....... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ...+.......
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~ 248 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ----LALISQLCGSI 248 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCC
Confidence 7653221 22234568999999999876 4589999999999999999999999975332111 11111111000
Q ss_pred c---hhhhccccc----------cCcCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 455 K---LEMLVDKDL----------KNNYDR-----IELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 455 ~---~~~~~~~~~----------~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. ......... ...... ...+.+.+++.+||+.||++|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0 000000000 000000 013568899999999999999999999975
No 207
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-41 Score=346.66 Aligned_cols=268 Identities=21% Similarity=0.263 Sum_probs=202.9
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC-----Cce
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TER 302 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~-----~~~ 302 (552)
..+|.+.+.||+|+||.||+|... +++.||||++...........+.+|+.++..++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457899999999999999999965 68899999997544434446788999999999999999999998755 367
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
++||||+. |+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEcccC-cCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 89999997 5999988764 599999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCce--eecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhh------
Q 008828 383 CDSHV--TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE------ 453 (552)
Q Consensus 383 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 453 (552)
..... .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+.........+
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 22211 234569999999998754 458999999999999999999999997543322111111000000000
Q ss_pred -----cchhhhcccccc--CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 454 -----KKLEMLVDKDLK--NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 454 -----~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
............ .......+..+.+++.+||+.||++|||+.|++++-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000000000000 000112346789999999999999999999998653
No 208
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.5e-42 Score=348.82 Aligned_cols=254 Identities=10% Similarity=0.004 Sum_probs=182.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC--chHHHHHHHHHHHhhc--cccccceee-------eEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLA--VHRNLLRLI-------GFC 296 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~~--~h~niv~l~-------~~~ 296 (552)
..+|...+.||+|+||+||+|.+. +++.||||+++..... .....+.+|+.++..+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888899999999999999975 7899999999865432 2334577885555444 699988755 343
Q ss_pred ecC-----------------CceeEEEeeccCCChhhhhcc-CCCCCHHHH------HHHHHHHHHHHHHHhhcCCCceE
Q 008828 297 MTT-----------------TERLLVYPYMSNGSVASRLKA-KPSLDWATR------KRIALGAARGLLYLHEQCDPKII 352 (552)
Q Consensus 297 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~iv 352 (552)
... ...++||||++ |+|.+++.. ...+.+..+ ..++.||+.||+|||++ +|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 322 23799999999 899999975 334566666 78889999999999999 999
Q ss_pred EcCCCCCceeeCCCCceEEcccccceecCCCCCceeecccccccccCchhhcc--CCCCCccchhHHHHHHHHHHhCCCc
Q 008828 353 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRA 430 (552)
Q Consensus 353 H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv~l~elltg~~p 430 (552)
||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||+||+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999986642 2224457799999999987 6799999999999999999999999
Q ss_pred cccCcccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 008828 431 LEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 499 (552)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 499 (552)
|.......... . .....................+..+.+++.+||+.||++|||+.|+++
T Consensus 293 f~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGS-W--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTC-C--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccc-h--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 97543211100 0 000000000111111111234578999999999999999999999975
No 209
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-42 Score=342.78 Aligned_cols=260 Identities=26% Similarity=0.363 Sum_probs=199.2
Q ss_pred ccCHHHHHHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEe
Q 008828 219 RFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFC 296 (552)
Q Consensus 219 ~~~~~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~ 296 (552)
.+.+.++....++|.+.+.||+|+||.||+|... +++.||||++.... .....+.+|+.++.++ +||||+++++++
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 3444445556788999999999999999999974 68999999996543 2345688999999998 799999999998
Q ss_pred ec------CCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc
Q 008828 297 MT------TTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 368 (552)
Q Consensus 297 ~~------~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 368 (552)
.. ....++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 76 45789999999999999999753 5799999999999999999999999 9999999999999999999
Q ss_pred eEEcccccceecCCCCCceeecccccccccCchhhc-----cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccch
Q 008828 369 AVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 443 (552)
Q Consensus 369 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~ 443 (552)
+||+|||++........ ......||..|+|||.+. ...++.++|||||||++|+|+||+.||......
T Consensus 168 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------ 240 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------ 240 (326)
T ss_dssp EEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------
T ss_pred EEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------
Confidence 99999999986543221 223446899999999997 567899999999999999999999999643211
Q ss_pred HHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 444 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
......... . .+.. .....+..+.+++.+||+.||++|||+.|++++
T Consensus 241 -~~~~~~~~~-~-----~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 241 -RALFLIPRN-P-----APRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp -HHHHHHHHS-C-----CCCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -HHHHHhhcC-c-----cccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111111110 0 0111 111224678999999999999999999999974
No 210
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=335.48 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=201.0
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
..++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+|+.++..++||||+++++++......++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 4567899999999999999999976 58999999997543 2356889999999999999999999999999999999
Q ss_pred eeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 307 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 307 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
||+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 9999999999986 456799999999999999999999999 999999999999999999999999999987653222
Q ss_pred ceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 465 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (552)
......||..|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... .+..
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~------~~~~- 245 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-------RAIFMIPTNP------PPTF- 245 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSC------CCCC-
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCC------Cccc-
Confidence 223446899999999999999999999999999999999999999743211 1111111000 0000
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 466 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 466 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+...+..+.+++.+||+.||.+|||+.+++++
T Consensus 246 -~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 -RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp -SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1112234678999999999999999999999863
No 211
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.5e-41 Score=336.32 Aligned_cols=263 Identities=20% Similarity=0.299 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|++.+.||+|+||.||+|... +++.||||+++..... .....+.+|+.++.+++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 56888899999999999999976 6899999999654322 223568899999999999999999999999999999999
Q ss_pred eccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 308 YMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 308 ~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|+. |+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 5999998754 4689999999999999999999999 99999999999999999999999999998664322
Q ss_pred ceeecccccccccCchhhccCC-CCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcc--hhhh---
Q 008828 386 HVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK--LEML--- 459 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 459 (552)
.......||..|+|||.+.+.. ++.++|||||||++|+|+||+.||........ ............. ....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ---LFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGS
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCchhhhhHhhcC
Confidence 1223345899999999998765 79999999999999999999999975332110 1111111100000 0000
Q ss_pred --cccccc----Cc---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 460 --VDKDLK----NN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 460 --~~~~~~----~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+... .. .....+.++.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 00 011234678999999999999999999999874
No 212
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.3e-41 Score=370.68 Aligned_cols=257 Identities=23% Similarity=0.348 Sum_probs=205.4
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEECC----CcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCce
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~ 302 (552)
...++|.+.+.||+|+||+||+|.+.. +..||+|.++..........+.+|+.+++.++||||+++++++. .+..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 344668888999999999999999742 46799999876544444567999999999999999999999985 4568
Q ss_pred eEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 303 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999999754 4799999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
...........+|+.|+|||.+.+..++.++|||||||++|||++ |..||..... .+.........
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-------~~~~~~i~~~~------ 609 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-------NDVIGRIENGE------ 609 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHHTC------
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHcCC------
Confidence 443333334457889999999999999999999999999999997 8889864321 11111111111
Q ss_pred cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 461 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 461 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
....+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 610 ----~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 610 ----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1112233457899999999999999999999999999863
No 213
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.7e-41 Score=333.33 Aligned_cols=253 Identities=22% Similarity=0.260 Sum_probs=204.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC--------chHHHHHHHHHHHhhcc-ccccceeeeEeec
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--------GGEIQFQTEVEMISLAV-HRNLLRLIGFCMT 298 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~~e~~~l~~~~-h~niv~l~~~~~~ 298 (552)
.++|.+.+.||+|+||.||+|... +++.||||+++..... .....+.+|+.++.++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888999999999999999975 6899999999654211 11345789999999995 9999999999999
Q ss_pred CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccce
Q 008828 299 TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 378 (552)
Q Consensus 299 ~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 378 (552)
....++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchh
Confidence 999999999999999999998877899999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCceeecccccccccCchhhc------cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 379 LLDHCDSHVTTAVRGTVGHIAPEYLS------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 379 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
...... ......|+..|+|||.+. ...++.++||||||+++|+|++|+.||..... .........
T Consensus 173 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~ 243 (298)
T 1phk_A 173 QLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------MLMLRMIMS 243 (298)
T ss_dssp ECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH
T ss_pred hcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-------HHHHHHHhc
Confidence 765432 223456899999999985 45688999999999999999999999964321 111111111
Q ss_pred hcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 453 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
... ..........+..+.+++.+||+.||++|||+.|++++
T Consensus 244 ~~~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 244 GNY-------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp TCC-------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CCc-------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 100 00001112234679999999999999999999999863
No 214
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.6e-41 Score=336.98 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=200.7
Q ss_pred HHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-chHHHHHHHHHHHhhcc--ccccceeeeEeecCCce
Q 008828 226 QSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAV--HRNLLRLIGFCMTTTER 302 (552)
Q Consensus 226 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~--h~niv~l~~~~~~~~~~ 302 (552)
....++|.+.+.||+|+||.||+|...+++.||||++...... .....+.+|+.++..++ ||||+++++++......
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 3345678899999999999999999888999999999654322 23457889999999997 59999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
++||| +.+++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||+++ +.+||+|||+++....
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 99999 56789999999888899999999999999999999999 9999999999999965 8999999999987643
Q ss_pred CCCc-eeecccccccccCchhhcc-----------CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHH
Q 008828 383 CDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 450 (552)
Q Consensus 383 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 450 (552)
.... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..... ....+.
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~-- 250 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLH-- 250 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHH--
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH------HHHHHH--
Confidence 3222 2234568999999999875 4688899999999999999999999964221 011111
Q ss_pred hhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 451 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
.+.+......++...+..+.+++.+||+.||++|||+.|++++-
T Consensus 251 -------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 251 -------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp -------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -------HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 11122222222222346789999999999999999999998643
No 215
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.9e-40 Score=346.72 Aligned_cols=259 Identities=19% Similarity=0.226 Sum_probs=204.4
Q ss_pred hcCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhccc-cccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH-RNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h-~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... .++..|+.++..++| +++..+..++......++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 36789999999999999999996 46899999988654332 347789999999986 55666666777788889999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee---CCCCceEEcccccceecCC
Q 008828 307 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 307 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~~ 382 (552)
||+ +++|.+++.. ...+++..++.|+.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999 8999999974 55799999999999999999999999 99999999999999 6889999999999987654
Q ss_pred CCCc------eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcch
Q 008828 383 CDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 456 (552)
Q Consensus 383 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (552)
.... ......||..|+|||.+.+..++.++|||||||++|||++|+.||...........+... .........
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i-~~~~~~~~~ 237 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI-SEKKVATSI 237 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHH-HHHHHHSCH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHH-hhccccccH
Confidence 3322 122556999999999999999999999999999999999999999753322111111111 111111111
Q ss_pred hhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 457 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
..+ .. ..+.++.+++.+||+.+|++||++.+|++.|+..
T Consensus 238 ~~l-----~~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 238 EAL-----CR----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHH-----HT----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHH-----hc----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 111 11 1236799999999999999999999999988764
No 216
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.2e-41 Score=350.18 Aligned_cols=258 Identities=21% Similarity=0.317 Sum_probs=194.3
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCc------ee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE------RL 303 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~------~~ 303 (552)
.+|.+.+.||+|+||+||+|+..++..||+|++...... ..+|+.+++.++||||+++++++..... .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 458888999999999999999877777999988643322 2369999999999999999999865433 77
Q ss_pred EEEeeccCCChhhhh---ccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC-CCCceEEccccccee
Q 008828 304 LVYPYMSNGSVASRL---KAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKL 379 (552)
Q Consensus 304 lv~e~~~~g~L~~~l---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~ 379 (552)
+||||++++.+.... .....+++..+..++.||++||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999875433322 2356799999999999999999999999 999999999999999 799999999999987
Q ss_pred cCCCCCceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh------
Q 008828 380 LDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ------ 452 (552)
Q Consensus 380 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 452 (552)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||........ +...++....
T Consensus 192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ---LVEIIKVLGTPSREQI 266 (394)
T ss_dssp CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHH
T ss_pred ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHH
Confidence 643322 2345689999999998765 589999999999999999999999975432211 1111111000
Q ss_pred ----h----cchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 453 ----E----KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 453 ----~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. .....+........+....+.++.+++.+||+.||++|||+.|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0 00000000000111122244789999999999999999999999975
No 217
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.3e-40 Score=340.03 Aligned_cols=264 Identities=20% Similarity=0.233 Sum_probs=193.3
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccC-chHHHHHHHHHHHhhccccccceeeeEeecCC------c
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT------E 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~------~ 301 (552)
++|.+.+.||+|+||.||+|... +++.||||++...... .....+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57888999999999999999965 6889999999754322 23456889999999999999999999987654 6
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
.++||||+++ +|.+.+.. .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCSE-EHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCCC-CHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 7999999975 78888763 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccch--------HHH-------
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM--------LDW------- 446 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~--------~~~------- 446 (552)
.. .......||+.|+|||++.+..++.++|||||||++|||+||+.||...........+ ..+
T Consensus 179 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 256 (371)
T 2xrw_A 179 TS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 256 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred cc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence 32 2233456999999999999999999999999999999999999999754321100000 000
Q ss_pred HHHHhhh------cchhhhccccccC---cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 447 VKKIHQE------KKLEMLVDKDLKN---NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 447 ~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
+...... ............+ ......+..+.+++.+||+.||++|||++|++++-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 0000000 0000000000000 01123467899999999999999999999998753
No 218
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.4e-41 Score=351.61 Aligned_cols=196 Identities=22% Similarity=0.277 Sum_probs=170.1
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhc------cccccceeeeEeecCCce
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA------VHRNLLRLIGFCMTTTER 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~------~h~niv~l~~~~~~~~~~ 302 (552)
.+|++.+.||+|+||+||+|... +++.||||+++... ....++.+|+.++..+ .|+||+++++++......
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 56888999999999999999865 58999999997532 2234577888888776 577999999999999999
Q ss_pred eEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc--eEEcccccce
Q 008828 303 LLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--AVVGDFGLAK 378 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~ 378 (552)
++||||+. ++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+|||++.
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 6899988754 3599999999999999999999999 9999999999999999887 9999999997
Q ss_pred ecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCc
Q 008828 379 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGK 435 (552)
Q Consensus 379 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~ 435 (552)
..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 65432 223568999999999999999999999999999999999999997543
No 219
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.4e-41 Score=344.73 Aligned_cols=264 Identities=20% Similarity=0.263 Sum_probs=200.5
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC-----Cce
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TER 302 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~-----~~~ 302 (552)
.++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|+.+++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 367888999999999999999976 68999999997544333455688999999999999999999988754 678
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
++||||+. |+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEeccC-ccHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 99999997 5899988764 699999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCc---------eeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 383 CDSH---------VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 383 ~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
.... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||........ ...+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~ 240 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ----LLLIFGIIG 240 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHHHHhC
Confidence 2211 1123468999999998765 6789999999999999999999999975432110 000000000
Q ss_pred hc----ch--------hhhccc------cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 453 EK----KL--------EMLVDK------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 453 ~~----~~--------~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
.. .. .+.... ..........+..+.+++.+||+.||++|||+.|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 00 00 000000 000000112346789999999999999999999998743
No 220
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.4e-40 Score=342.72 Aligned_cols=262 Identities=19% Similarity=0.238 Sum_probs=200.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhcc--------ccccceeeeEee---
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--------HRNLLRLIGFCM--- 297 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~--------h~niv~l~~~~~--- 297 (552)
++|.+.+.||+|+||+||+|+.. +++.||||+++... .....+.+|+.++..++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 67889999999999999999864 68899999996432 23456889999999886 788999999987
Q ss_pred -cCCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC-------
Q 008828 298 -TTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY------- 367 (552)
Q Consensus 298 -~~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~------- 367 (552)
.....++||||+ ++++.+.+... ..+++..++.++.||+.||.|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 556789999999 55666665432 56999999999999999999999864 899999999999999775
Q ss_pred ------------------------------------------ceEEcccccceecCCCCCceeecccccccccCchhhcc
Q 008828 368 ------------------------------------------EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 405 (552)
Q Consensus 368 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 405 (552)
.+||+|||+++..... .....||..|+|||++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence 7999999999876432 233468999999999999
Q ss_pred CCCCCccchhHHHHHHHHHHhCCCccccCcccccccch--HHHHHHHhhhcc---------hhhhcccc-----------
Q 008828 406 GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM--LDWVKKIHQEKK---------LEMLVDKD----------- 463 (552)
Q Consensus 406 ~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~----------- 463 (552)
..++.++|||||||++|||+||+.||............ ...+........ ........
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP 347 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence 99999999999999999999999999754332211110 011111100000 00000000
Q ss_pred --------ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 464 --------LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 464 --------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
-....+...+..+.+|+.+||+.||++|||+.|++++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012356677889999999999999999999999864
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=340.81 Aligned_cols=261 Identities=23% Similarity=0.375 Sum_probs=202.3
Q ss_pred HHHHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCcc-CchHHHHHHHHHHHhhccccccceeeeEeecCCc
Q 008828 223 KELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 223 ~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~ 301 (552)
+++....++|.+.+.||+|+||.||+|..++ .||+|+++.... ......+.+|+.++.+++||||+++++++.....
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3334456788999999999999999999864 499999875432 2223457789999999999999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceec
Q 008828 302 RLLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 380 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 380 (552)
.++||||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++ ++.+||+|||+++..
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 999999999999999998654 799999999999999999999999 999999999999998 689999999998754
Q ss_pred CCCC----CceeecccccccccCchhhcc---------CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHH
Q 008828 381 DHCD----SHVTTAVRGTVGHIAPEYLST---------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 447 (552)
Q Consensus 381 ~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 447 (552)
.... ........||..|+|||.+.. ..++.++|||||||++|||+||+.||...... ...
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~ 252 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-------AII 252 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-------HHH
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHH
Confidence 3211 112233458999999999874 45789999999999999999999999743211 111
Q ss_pred HHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 008828 448 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 505 (552)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 505 (552)
...... ..+... ....+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 253 ~~~~~~------~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 253 WQMGTG------MKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp HHHHTT------CCCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred HHhccC------CCCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 111111 111111 1112356899999999999999999999999999854
No 222
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=328.64 Aligned_cols=250 Identities=20% Similarity=0.294 Sum_probs=198.6
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCc---cCchHHHHHHHHHHHhhccccccceeeeEee--cCCce
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN---AIGGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTER 302 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~--~~~~~ 302 (552)
.++|.+.+.||+|+||.||+|... +++.||+|+++... .......+.+|+.++..++||||+++++++. .....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 368999999999999999999974 68899999997532 1234567899999999999999999999984 45578
Q ss_pred eEEEeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceec
Q 008828 303 LLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 380 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 380 (552)
++||||++++ |.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 6666653 45799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-CceeecccccccccCchhhccCC--CCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchh
Q 008828 381 DHCD-SHVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 457 (552)
Q Consensus 381 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (552)
.... ........||..|+|||.+.+.. ++.++||||||+++|||++|+.||..... ......+....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~~--- 229 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-------YKLFENIGKGS--- 229 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCC---
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-------HHHHHHHhcCC---
Confidence 5322 22334456999999999997654 37899999999999999999999974321 11111111110
Q ss_pred hhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 458 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. ..+...+..+.+++.+||+.||++|||+.|++++
T Consensus 230 ----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 ----Y----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----C----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----C----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 1122234678999999999999999999999974
No 223
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.2e-40 Score=330.42 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=199.0
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++..++||||+++++++......++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 357888999999999999999986 58999999996543 2345678899999999999999999999999999999999
Q ss_pred eccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 308 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 308 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
|+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...... ..
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HH
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cc
Confidence 9999999998864 56799999999999999999999999 9999999999999999999999999987532110 11
Q ss_pred eeecccccccccCchhhc-----cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcc
Q 008828 387 VTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 461 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (552)
......||..|+|||.+. ...++.++||||||+++|+|++|+.||..... ............ ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~-~~--- 241 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSDP-PT--- 241 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCC-CC---
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHHHhccCC-cc---
Confidence 122345899999999984 56789999999999999999999999874321 111111111110 00
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 462 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 462 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
...+...+..+.+++.+||+.||++|||+.|++++-
T Consensus 242 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 242 ----LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp ----CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred ----cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 011222346789999999999999999999998753
No 224
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.4e-41 Score=341.41 Aligned_cols=270 Identities=21% Similarity=0.266 Sum_probs=190.4
Q ss_pred HHHHHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCc
Q 008828 223 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 301 (552)
Q Consensus 223 ~e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~ 301 (552)
.+.....++|.+.+.||+|+||+||+|... +++.||||++...... ...+.+++..+..++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 344566789999999999999999999975 6899999998654322 2346678888888999999999999865433
Q ss_pred -------eeEEEeeccCCChhhh----hccCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCceEEcCCCCCceeeCC-CC
Q 008828 302 -------RLLVYPYMSNGSVASR----LKAKPSLDWATRKRIALGAARGLLYLH--EQCDPKIIHRDVKAANILLDE-YY 367 (552)
Q Consensus 302 -------~~lv~e~~~~g~L~~~----l~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~dlk~~Nill~~-~~ 367 (552)
.++||||++++ |... ......+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 78999999874 4433 345667999999999999999999999 77 9999999999999996 89
Q ss_pred ceEEcccccceecCCCCCceeecccccccccCchhhccCC-CCCccchhHHHHHHHHHHhCCCccccCcccccccchHH-
Q 008828 368 EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD- 445 (552)
Q Consensus 368 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~- 445 (552)
.+||+|||+++...... ......||..|+|||++.+.. ++.++|||||||++|||+||+.||...........+..
T Consensus 170 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp EEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred cEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 99999999998765332 233456899999999987654 89999999999999999999999975432111110000
Q ss_pred -------HHHHHhhhcchhhhccc------cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 446 -------WVKKIHQEKKLEMLVDK------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 446 -------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
+..............+. ..........+.++.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000000000000 00011112245789999999999999999999999864
No 225
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.4e-41 Score=337.18 Aligned_cols=264 Identities=23% Similarity=0.329 Sum_probs=200.4
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEE--CCCcEEEEEEeccCccC-chHHHHHHHHHHHhhc---cccccceeeeEee----
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYL--QDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLA---VHRNLLRLIGFCM---- 297 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~~---~h~niv~l~~~~~---- 297 (552)
+.++|.+.+.||+|+||.||+|.. .+++.||+|+++..... .....+.+|+.++..+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456899999999999999999997 36889999999643322 1223466788777766 7999999999987
Q ss_pred -cCCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEccc
Q 008828 298 -TTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDF 374 (552)
Q Consensus 298 -~~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 374 (552)
.....++||||+. |+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999998 6999998753 3599999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh--
Q 008828 375 GLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ-- 452 (552)
Q Consensus 375 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 452 (552)
|+++..... .......||..|+|||.+.+..++.++|||||||++|||+||+.||........ ....+.....
T Consensus 165 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~ 239 (326)
T 1blx_A 165 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ---LGKILDVIGLPG 239 (326)
T ss_dssp CSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCC
T ss_pred cccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHHHcCCCC
Confidence 999765422 122345689999999999999999999999999999999999999975432111 0011111000
Q ss_pred -hcchhhh------cc---ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 453 -EKKLEML------VD---KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 453 -~~~~~~~------~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
....... .. ......+....+..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 00 000011122334778999999999999999999999864
No 226
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.4e-41 Score=349.68 Aligned_cols=256 Identities=24% Similarity=0.317 Sum_probs=193.0
Q ss_pred CCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecC------Ccee
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT------TERL 303 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~------~~~~ 303 (552)
+|...+.||+|+||+||+|++. +|+.||||++..... .+.+|+++++.++||||+++++++... ...+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 5778899999999999999985 589999999865432 234799999999999999999988542 2356
Q ss_pred EEEeeccCCChhhhhc----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC-CceEEcccccce
Q 008828 304 LVYPYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-YEAVVGDFGLAK 378 (552)
Q Consensus 304 lv~e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~ 378 (552)
+||||+++ ++.+.+. ....+++..+..++.||++||.|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 6665553 456799999999999999999999998 99999999999999955 678999999998
Q ss_pred ecCCCCCceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhh----
Q 008828 379 LLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE---- 453 (552)
Q Consensus 379 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 453 (552)
....... .....||..|+|||++.+. .++.++|||||||++|||++|+.||....... .+...++.....
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~---~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD---QLVEIIKVLGTPTREQ 280 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHH
Confidence 7653322 2345689999999999765 79999999999999999999999997543211 111111111000
Q ss_pred -----cchhhhcccccc-----CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 454 -----KKLEMLVDKDLK-----NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 454 -----~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
........+.+. ..+....+.++.+|+.+||+.||++|||+.|++++
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000001100 00122334789999999999999999999999864
No 227
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.6e-41 Score=340.59 Aligned_cols=262 Identities=22% Similarity=0.260 Sum_probs=183.3
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc-CchHHHHHHHHHHHhhccccccceeeeEeecC------Cc
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT------TE 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~------~~ 301 (552)
++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 67888999999999999999964 689999999965432 22345688999999999999999999998654 56
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
.++|+||+ +++|.+++.. ..+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 6799988876 4699999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhh-
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML- 459 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 459 (552)
.. .....||..|+|||++.+ ..++.++|||||||++|||+||+.||...........+...+.. ........+
T Consensus 184 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~-p~~~~~~~~~ 258 (367)
T 2fst_X 184 DE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKKIS 258 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCS-CCHHHHTTCC
T ss_pred cc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CCHHHHHHhh
Confidence 21 234568999999999987 67899999999999999999999999754321111000000000 000000000
Q ss_pred -------cc---ccccCc---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 460 -------VD---KDLKNN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 460 -------~~---~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
.. ...... .....+..+.+|+.+||+.||++|||+.|++++-
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 00 000000 0011246789999999999999999999999753
No 228
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.8e-40 Score=334.28 Aligned_cols=257 Identities=19% Similarity=0.267 Sum_probs=201.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-C-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccc------cceeeeEeecCCc
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-Q-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN------LLRLIGFCMTTTE 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~n------iv~l~~~~~~~~~ 301 (552)
++|.+.+.||+|+||+||+|.. . +++.||||+++... .....+.+|+.++..++|++ ++++++++...+.
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 5788899999999999999986 3 68899999996432 23456889999999888765 9999999999999
Q ss_pred eeEEEeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC--------------
Q 008828 302 RLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-------------- 365 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-------------- 365 (552)
.++||||+ +++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999997654 689999999999999999999999 9999999999999987
Q ss_pred -----CCceEEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccc
Q 008828 366 -----YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK 440 (552)
Q Consensus 366 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~ 440 (552)
++.+||+|||+++..... .....||..|+|||.+.+..++.++|||||||++|||+||+.||........
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~- 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH- 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH-
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH-
Confidence 678999999999865432 2334689999999999999999999999999999999999999975432111
Q ss_pred cchHHHHHHHhhhcc-----------------------------hhhhcccc-ccCcCCHHHHHHHHHHHHHccCCCCCC
Q 008828 441 GAMLDWVKKIHQEKK-----------------------------LEMLVDKD-LKNNYDRIELEEMVQVALLCTQYLPSL 490 (552)
Q Consensus 441 ~~~~~~~~~~~~~~~-----------------------------~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~ 490 (552)
...+........ ......+. -........++.+.+++.+||+.||++
T Consensus 243 ---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 243 ---LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp ---HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred ---HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 011111000000 00000000 001113345688999999999999999
Q ss_pred CCCHHHHHHH
Q 008828 491 RPKMSEVVRM 500 (552)
Q Consensus 491 RPs~~evl~~ 500 (552)
|||+.|++++
T Consensus 320 Rpt~~ell~h 329 (339)
T 1z57_A 320 RITLREALKH 329 (339)
T ss_dssp SCCHHHHTTS
T ss_pred ccCHHHHhcC
Confidence 9999999864
No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1e-40 Score=328.38 Aligned_cols=252 Identities=25% Similarity=0.344 Sum_probs=203.8
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc-CchHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++......++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 467899999999999999999976 689999999965432 234567889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC---CceEEcccccceecCCC
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY---YEAVVGDFGLAKLLDHC 383 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~~~~~ 383 (552)
||+++++|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++......
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999999999988777899999999999999999999999 99999999999999754 47999999999865432
Q ss_pred CCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhcccc
Q 008828 384 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 463 (552)
Q Consensus 384 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (552)
. ......||..|+|||.+.+ .++.++||||||+++|+|++|+.||..... ............ . .+..
T Consensus 178 ~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~-~--~~~~ 244 (287)
T 2wei_A 178 T--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETGKY-A--FDLP 244 (287)
T ss_dssp S--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCC-C--CCSG
T ss_pred C--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCC-C--CCch
Confidence 2 2233458999999999865 489999999999999999999999974321 111111111110 0 0000
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 464 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 464 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. ....+..+.+++.+||+.||++|||+.|++++
T Consensus 245 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 245 Q----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp G----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred h----hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0 11224678999999999999999999999873
No 230
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7.7e-41 Score=335.72 Aligned_cols=254 Identities=24% Similarity=0.313 Sum_probs=179.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHH-HHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|...+.||+|+||.||+|... +|+.||||+++.........++..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 67888999999999999999975 689999999976543333445566666 6777899999999999999999999999
Q ss_pred eccCCChhhhhcc-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 308 YMSNGSVASRLKA-----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 308 ~~~~g~L~~~l~~-----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
|+++ +|.+++.. ...+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9985 78777752 567999999999999999999999852 899999999999999999999999999986643
Q ss_pred CCCceeecccccccccCchhh----ccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhh
Q 008828 383 CDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 458 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (552)
.. ......||..|+|||.+ .+..++.++|||||||++|||++|+.||........ .+. ....
T Consensus 179 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~------~~~~ 244 (327)
T 3aln_A 179 SI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------QLT------QVVK 244 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------C------CCCC
T ss_pred cc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------HHH------HHhc
Confidence 22 22333589999999998 456789999999999999999999999974321100 000 0000
Q ss_pred hccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 459 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
...+.+........+..+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000111111112234779999999999999999999999763
No 231
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=342.12 Aligned_cols=264 Identities=20% Similarity=0.264 Sum_probs=182.5
Q ss_pred CCC-CCeeeeeCceEEEEEEEC---CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEee--cCCceeEE
Q 008828 232 FSS-KNLVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTERLLV 305 (552)
Q Consensus 232 ~~~-~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~--~~~~~~lv 305 (552)
|.+ .++||+|+||+||+|+++ +++.||||++..... ...+.+|+.+++.++||||+++++++. .....++|
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 554 568999999999999975 578999999975432 236789999999999999999999995 46778999
Q ss_pred EeeccCCChhhhhcc---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee----CCCCceEEc
Q 008828 306 YPYMSNGSVASRLKA---------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVVG 372 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~---------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~ 372 (552)
|||+.+ +|.+++.. ...+++..++.|+.||+.||.|||+. +|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 999974 78777742 12599999999999999999999999 99999999999999 678999999
Q ss_pred ccccceecCCCCC--ceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCcccccc--cchHHHH
Q 008828 373 DFGLAKLLDHCDS--HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQK--GAMLDWV 447 (552)
Q Consensus 373 Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~--~~~~~~~ 447 (552)
|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||......... ....+.+
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 9999987653221 223445689999999999874 5899999999999999999999999754321100 0000111
Q ss_pred HHHhhh---c---chhhh------------ccccccCcCC---------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 448 KKIHQE---K---KLEML------------VDKDLKNNYD---------RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 448 ~~~~~~---~---~~~~~------------~~~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
..+... . ....+ .......... ......+.+|+.+||+.||.+|||++|++++
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111000 0 00000 0000000000 0013568899999999999999999999975
Q ss_pred Hh
Q 008828 501 LE 502 (552)
Q Consensus 501 L~ 502 (552)
--
T Consensus 335 p~ 336 (405)
T 3rgf_A 335 PY 336 (405)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.4e-40 Score=335.33 Aligned_cols=259 Identities=19% Similarity=0.249 Sum_probs=196.6
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCce-----
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER----- 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~----- 302 (552)
++|.+.+.||+|+||+||+|... +|+.||||+++...... ....+.+|+.+++.++||||+++++++......
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 57888899999999999999965 68999999997543322 245688999999999999999999999877654
Q ss_pred -eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 303 -LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 303 -~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
++||||+. |+|.+.+.. .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 588888754 499999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh--hc----
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ--EK---- 454 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~---- 454 (552)
.. .....||+.|+|||.+.+ ..++.++|||||||++|+|+||+.||......... ......... ..
T Consensus 196 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 196 AE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL---TQILKVTGVPGTEFVQK 268 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCHHHHTT
T ss_pred cC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCcHHHHHH
Confidence 22 234568999999999987 68999999999999999999999999753321110 010000000 00
Q ss_pred --------chhhhccccccCc---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 008828 455 --------KLEMLVDKDLKNN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 502 (552)
Q Consensus 455 --------~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 502 (552)
....+. ...... .....+..+.+++.+||+.||++|||+.|++++--
T Consensus 269 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 269 LNDKAAKSYIQSLP-QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp CSCHHHHHHHHHSC-CCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred hhhhhhhhhhhccC-CCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 000000 000000 01123478999999999999999999999987533
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.7e-40 Score=327.57 Aligned_cols=252 Identities=25% Similarity=0.394 Sum_probs=193.5
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeec---------
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT--------- 298 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~--------- 298 (552)
.++|++.+.||+|+||.||+|... +++.||||+++... .....+.+|+.++..++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 456888899999999999999975 78999999996422 234568899999999999999999998864
Q ss_pred ----CCceeEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcc
Q 008828 299 ----TTERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 373 (552)
Q Consensus 299 ----~~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 373 (552)
....++||||+++|+|.+++... ..+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 34678999999999999999743 4688899999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCC-------------CceeecccccccccCchhhccC-CCCCccchhHHHHHHHHHHhCCCccccCccccc
Q 008828 374 FGLAKLLDHCD-------------SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQ 439 (552)
Q Consensus 374 fg~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~ 439 (552)
||++....... ........||..|+|||.+.+. .++.++|||||||++|||++ |+.....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~--- 233 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME--- 233 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH---
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh---
Confidence 99998654221 1122344589999999999864 78999999999999999998 4432110
Q ss_pred ccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 440 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
.......... ........++...+..+.+++.+||+.||.+|||+.|++++-
T Consensus 234 ---~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 234 ---RVNILKKLRS-------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp ---HHHHHHHHHS-------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred ---HHHHHHhccc-------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 0111111111 011122223344457789999999999999999999999753
No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.9e-39 Score=332.74 Aligned_cols=199 Identities=25% Similarity=0.311 Sum_probs=169.4
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-cc-----ccceeeeEeecCC
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HR-----NLLRLIGFCMTTT 300 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~-----niv~l~~~~~~~~ 300 (552)
..++|.+.+.||+|+||+||+|... +++.||||+++... ....++..|+.++..++ |+ +|+++++++....
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3568999999999999999999975 68899999997432 22345777888888775 44 4999999999999
Q ss_pred ceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC--CCCceEEccccc
Q 008828 301 ERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD--EYYEAVVGDFGL 376 (552)
Q Consensus 301 ~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg~ 376 (552)
..++||||+. |+|.+++... ..+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 5999998754 4699999999999999999999952 22899999999999995 578899999999
Q ss_pred ceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccC
Q 008828 377 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFG 434 (552)
Q Consensus 377 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~ 434 (552)
++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 208 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876432 23356899999999999999999999999999999999999999754
No 235
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=328.03 Aligned_cols=247 Identities=24% Similarity=0.346 Sum_probs=194.9
Q ss_pred HHHhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-----hHHHHHHHHHHHhhc----cccccceeeeE
Q 008828 226 QSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLA----VHRNLLRLIGF 295 (552)
Q Consensus 226 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~~----~h~niv~l~~~ 295 (552)
+...++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344578999999999999999999864 68899999996543221 223456789998888 89999999999
Q ss_pred eecCCceeEEEee-ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC-CCCceEEcc
Q 008828 296 CMTTTERLLVYPY-MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGD 373 (552)
Q Consensus 296 ~~~~~~~~lv~e~-~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~D 373 (552)
+...+..++|+|| +.+++|.+++.....+++..++.++.||+.||.|||+. +|+||||||+||+++ .++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 78999999998877899999999999999999999999 999999999999999 889999999
Q ss_pred cccceecCCCCCceeecccccccccCchhhccCCCC-CccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh
Q 008828 374 FGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 452 (552)
Q Consensus 374 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 452 (552)
||+++...... .....||..|+|||++.+..+. .++|||||||++|||++|+.||..... ...
T Consensus 184 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------------~~~ 247 (312)
T 2iwi_A 184 FGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------------ILE 247 (312)
T ss_dssp CSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHH
T ss_pred cchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------------Hhh
Confidence 99998765422 2345589999999999877764 589999999999999999999863210 000
Q ss_pred hcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 008828 453 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 502 (552)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 502 (552)
.. ..++...+..+.+++.+||+.||++|||+.|++++--
T Consensus 248 ---------~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 248 ---------AE--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp ---------TC--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred ---------hc--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00 0112223467899999999999999999999997543
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.9e-40 Score=332.39 Aligned_cols=259 Identities=19% Similarity=0.257 Sum_probs=196.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-hHHHHHHHHHHHhhccccccceeeeEeecCCc------
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE------ 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~------ 301 (552)
++|.+.+.||+|+||.||+|... +|+.||||++....... ....+.+|+.++..++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56888899999999999999975 68999999997543222 24568899999999999999999999987654
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecC
Q 008828 302 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
.++||||+. |+|.+++.. .+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 588888754 499999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhh--hcchhh
Q 008828 382 HCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ--EKKLEM 458 (552)
Q Consensus 382 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 458 (552)
.. .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||........ +......... ......
T Consensus 178 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 178 AE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHTT
T ss_pred CC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHH
Confidence 22 234468999999999987 6789999999999999999999999975432111 0000000000 000000
Q ss_pred h-----------cccccc---CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 459 L-----------VDKDLK---NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 459 ~-----------~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
+ ...... .......+..+.+++.+||+.||++|||+.|++++-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 0 000000 111223457899999999999999999999998653
No 237
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.2e-40 Score=330.14 Aligned_cols=244 Identities=23% Similarity=0.347 Sum_probs=201.6
Q ss_pred HhcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc-----hHHHHHHHHHHHhhcc--ccccceeeeEeecC
Q 008828 228 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAV--HRNLLRLIGFCMTT 299 (552)
Q Consensus 228 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~~~--h~niv~l~~~~~~~ 299 (552)
..++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++.+++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 4567889999999999999999864 68999999997543221 2234668999999986 59999999999999
Q ss_pred CceeEEEeeccC-CChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC-CCCceEEcccccc
Q 008828 300 TERLLVYPYMSN-GSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLA 377 (552)
Q Consensus 300 ~~~~lv~e~~~~-g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~ 377 (552)
+..++|||++.+ ++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++ +++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999976 89999998878899999999999999999999999 999999999999999 7899999999999
Q ss_pred eecCCCCCceeecccccccccCchhhccCCC-CCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcch
Q 008828 378 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 456 (552)
Q Consensus 378 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (552)
+..... ......||..|+|||++.+..+ +.++|||||||++|||+||+.||..... .... .
T Consensus 198 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------------~~~~-~- 259 (320)
T 3a99_A 198 ALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------------IIRG-Q- 259 (320)
T ss_dssp EECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHHC-C-
T ss_pred cccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------------hhcc-c-
Confidence 876532 2234569999999999987775 6889999999999999999999963210 0000 0
Q ss_pred hhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 457 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
.. ++...+.++.+++.+||+.||++|||+.|++++-
T Consensus 260 -----~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 260 -----VF----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp -----CC----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred -----cc----ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 00 1112236789999999999999999999998753
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.9e-40 Score=330.44 Aligned_cols=251 Identities=20% Similarity=0.247 Sum_probs=173.0
Q ss_pred hcCCCCC-CeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeec----CCce
Q 008828 229 TSNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTER 302 (552)
Q Consensus 229 ~~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~----~~~~ 302 (552)
.++|.+. ++||+|+||+||+|... +++.||||++.... ....+....+..+.||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 3577774 47999999999999976 68999999996432 112223334566789999999999876 4457
Q ss_pred eEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC---CCceEEcccccc
Q 008828 303 LLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 377 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~ 377 (552)
++||||+++|+|.+++... ..+++..++.++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 8999999999999999755 3699999999999999999999999 9999999999999986 456999999999
Q ss_pred eecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchh
Q 008828 378 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 457 (552)
Q Consensus 378 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (552)
+..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.............. .... .
T Consensus 179 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~~~-~--- 248 (336)
T 3fhr_A 179 KETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR---RIRL-G--- 248 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH---hhhc-c---
Confidence 865432 22345589999999999888899999999999999999999999974332111000000 0000 0
Q ss_pred hhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 458 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
............+..+.+++.+||+.||++|||+.|++++
T Consensus 249 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 ---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000111112234778999999999999999999999974
No 239
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1e-39 Score=333.69 Aligned_cols=262 Identities=19% Similarity=0.261 Sum_probs=198.2
Q ss_pred cCCCCCCeeeeeCceEEEEEEE-CCCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-----------ccccceeeeEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-----------HRNLLRLIGFCM 297 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-----------h~niv~l~~~~~ 297 (552)
.+|.+.+.||+|+||+||+|.. .+++.||||+++... .....+.+|+.++.+++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 5788899999999999999996 468999999996432 22446788999988876 899999999987
Q ss_pred cCC----ceeEEEeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC------C
Q 008828 298 TTT----ERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD------E 365 (552)
Q Consensus 298 ~~~----~~~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~------~ 365 (552)
... ..++||||+ +++|.+++.. ...+++..+..++.||+.||.|||+++ +|+||||||+|||++ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 654 688999999 8899999875 346999999999999999999999853 899999999999994 4
Q ss_pred CCceEEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccc---
Q 008828 366 YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA--- 442 (552)
Q Consensus 366 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~--- 442 (552)
.+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 458999999999876432 2234689999999999999999999999999999999999999975432111100
Q ss_pred hHHHHHHHhh--------hcchhhhcc----------c---------cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 008828 443 MLDWVKKIHQ--------EKKLEMLVD----------K---------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS 495 (552)
Q Consensus 443 ~~~~~~~~~~--------~~~~~~~~~----------~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 495 (552)
+......... .......+. . .-...++...+.++.+++.+||+.||++|||+.
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 0011100000 000000000 0 001134567788999999999999999999999
Q ss_pred HHHHH
Q 008828 496 EVVRM 500 (552)
Q Consensus 496 evl~~ 500 (552)
|++++
T Consensus 330 ell~h 334 (373)
T 1q8y_A 330 GLVNH 334 (373)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99874
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.5e-40 Score=341.48 Aligned_cols=249 Identities=24% Similarity=0.271 Sum_probs=187.6
Q ss_pred CCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEEEeecc
Q 008828 232 FSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVYPYMS 310 (552)
Q Consensus 232 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv~e~~~ 310 (552)
|...+.||+|+||+||.+...+|+.||||++.... ...+.+|+.++.++ +||||+++++++......++||||+.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 44567899999999987766779999999986432 34577899999876 89999999999999999999999996
Q ss_pred CCChhhhhccCCCC-------CHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC-------------CceE
Q 008828 311 NGSVASRLKAKPSL-------DWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-------------YEAV 370 (552)
Q Consensus 311 ~g~L~~~l~~~~~l-------~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~~k 370 (552)
|+|.+++...... ++..++.++.||+.||.|||+. +|+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6999999755322 3334678999999999999999 99999999999999754 5899
Q ss_pred EcccccceecCCCCCc---eeecccccccccCchhhcc-------CCCCCccchhHHHHHHHHHHh-CCCccccCccccc
Q 008828 371 VGDFGLAKLLDHCDSH---VTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQ 439 (552)
Q Consensus 371 l~Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~ 439 (552)
|+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~- 247 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE- 247 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence 9999999877643322 1234569999999999976 578999999999999999999 899986422110
Q ss_pred ccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 008828 440 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 501 (552)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 501 (552)
....... .. .+..........+.++.+++.+||+.||++|||+.|++++-
T Consensus 248 ----~~i~~~~---~~-----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 248 ----SNIIRGI---FS-----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp ----HHHHHTC---CC-----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred ----HHHhcCC---CC-----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 0111000 00 01111122456678899999999999999999999998643
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-39 Score=329.69 Aligned_cols=257 Identities=18% Similarity=0.247 Sum_probs=198.5
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CC-cEEEEEEeccCccCchHHHHHHHHHHHhhccccc------cceeeeEeecCCc
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DG-TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN------LLRLIGFCMTTTE 301 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~n------iv~l~~~~~~~~~ 301 (552)
++|.+.+.||+|+||+||+|... ++ +.||+|+++... .....+.+|+.++..++|++ ++.+.+++.....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 57888999999999999999975 34 789999996432 23456888999999998776 8999999999999
Q ss_pred eeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceee----------------
Q 008828 302 RLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---------------- 363 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---------------- 363 (552)
.++||||+ ++++.+.+... ..+++..+..++.||+.||.|||++ +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 56777776543 4799999999999999999999999 99999999999999
Q ss_pred ---CCCCceEEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccc
Q 008828 364 ---DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK 440 (552)
Q Consensus 364 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~ 440 (552)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~- 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH- 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred ccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 56789999999999865432 2335699999999999999999999999999999999999999975332111
Q ss_pred cchHHHHHHHhhhcc---h--------------------------hhhccc-cccCcCCHHHHHHHHHHHHHccCCCCCC
Q 008828 441 GAMLDWVKKIHQEKK---L--------------------------EMLVDK-DLKNNYDRIELEEMVQVALLCTQYLPSL 490 (552)
Q Consensus 441 ~~~~~~~~~~~~~~~---~--------------------------~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~ 490 (552)
...+........ . .....+ .............+.+++.+||+.||++
T Consensus 248 ---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 248 ---LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp ---HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred ---HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 111111100000 0 000000 0000112344578999999999999999
Q ss_pred CCCHHHHHHH
Q 008828 491 RPKMSEVVRM 500 (552)
Q Consensus 491 RPs~~evl~~ 500 (552)
|||+.|++++
T Consensus 325 Rpt~~e~l~h 334 (355)
T 2eu9_A 325 RITLAEALLH 334 (355)
T ss_dssp SCCHHHHTTS
T ss_pred CcCHHHHhcC
Confidence 9999999854
No 242
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=331.87 Aligned_cols=262 Identities=21% Similarity=0.263 Sum_probs=191.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEee-----------
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM----------- 297 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~----------- 297 (552)
++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 57888899999999999999976 48999999986543 233457889999999999999999999874
Q ss_pred ---cCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC-CCCceEEcc
Q 008828 298 ---TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGD 373 (552)
Q Consensus 298 ---~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~D 373 (552)
.....++||||++ |+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++ +++.+||+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3456789999998 699999875 4699999999999999999999999 999999999999997 577999999
Q ss_pred cccceecCCCCC--ceeecccccccccCchhhcc-CCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHH
Q 008828 374 FGLAKLLDHCDS--HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 450 (552)
Q Consensus 374 fg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 450 (552)
||+++....... .......+|..|+|||.+.+ ..++.++|||||||++|||+||+.||......... .......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~ 241 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM---QLILESI 241 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHS
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHhc
Confidence 999987643211 12233457899999998866 67899999999999999999999999754321110 0000000
Q ss_pred hh--hcchhh-------hcccccc------CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 451 HQ--EKKLEM-------LVDKDLK------NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 451 ~~--~~~~~~-------~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.. .....+ ....... .......+..+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00 000000 0000000 00111234779999999999999999999999864
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=322.92 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=179.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHH-HHHHHHHHhhccccccceeeeEeecCCceeEEEe
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~e 307 (552)
++|.+.+.||+|+||.||+|... +|+.||||+++.........+ +.++..++..++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 56788899999999999999975 689999999976543333333 4445556778899999999999999999999999
Q ss_pred eccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 308 YMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 308 ~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|+ ++.+..+.. ....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (318)
T 2dyl_A 105 LM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179 (318)
T ss_dssp CC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-
Confidence 99 445555443 25679999999999999999999998 5 89999999999999999999999999997654322
Q ss_pred ceeecccccccccCchhhc-----cCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhc
Q 008828 386 HVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 460 (552)
Q Consensus 386 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (552)
......||+.|+|||.+. ...++.++|||||||++|||+||+.||..... .............
T Consensus 180 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~----- 247 (318)
T 2dyl_A 180 -AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT------DFEVLTKVLQEEP----- 247 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHHSCC-----
T ss_pred -cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc------cHHHHHHHhccCC-----
Confidence 223445899999999994 45689999999999999999999999974221 1111111111110
Q ss_pred cccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 461 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 461 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
+... .....+..+.+++.+||+.||.+|||+.|++++
T Consensus 248 -~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 -PLLP--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp -CCCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -CCCC--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000 011133678999999999999999999999863
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3e-40 Score=354.08 Aligned_cols=258 Identities=24% Similarity=0.331 Sum_probs=199.2
Q ss_pred hcCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeec------CCc
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT------TTE 301 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~------~~~ 301 (552)
..+|.+.+.||+|+||+||+|... +|+.||||+++..........+.+|+.++..++||||+++++++.. ...
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 367999999999999999999974 6899999999765444445678999999999999999999999765 667
Q ss_pred eeEEEeeccCCChhhhhccCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCc---eEEcccc
Q 008828 302 RLLVYPYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFG 375 (552)
Q Consensus 302 ~~lv~e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 375 (552)
.++||||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999997543 699999999999999999999999 9999999999999997664 9999999
Q ss_pred cceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcc
Q 008828 376 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 455 (552)
Q Consensus 376 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (552)
++....... ......||..|+|||.+.+..++.++|||||||++|+|+||..||....... .|.........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~------~~~~~i~~~~~ 241 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV------QWHGKVREKSN 241 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH------HSSTTCC----
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh------hhhhhhhcccc
Confidence 998765432 2334569999999999999999999999999999999999999997532111 11110000000
Q ss_pred hhhhcc----------c--cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 008828 456 LEMLVD----------K--DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEV 497 (552)
Q Consensus 456 ~~~~~~----------~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 497 (552)
...... . ..........+..+.+++.+||+.||++|||+.|+
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000 0 01122345567889999999999999999999774
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=334.88 Aligned_cols=248 Identities=23% Similarity=0.280 Sum_probs=187.0
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEEEee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv~e~ 308 (552)
.+|...+.||+|+||+||.....+++.||||++..... ..+.+|+.++..+ +||||+++++++......++||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 45778889999999997655566799999999965332 2345899999988 799999999999999999999999
Q ss_pred ccCCChhhhhccCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC-----CCceEEcccccceecCC
Q 008828 309 MSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-----YYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 309 ~~~g~L~~~l~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~~~~~~~ 382 (552)
+. |+|.+++.... ...+..+..++.||+.||.|||+. +|+||||||+|||++. ...+||+|||+++....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 96 59999987543 466667789999999999999999 9999999999999953 34688999999987653
Q ss_pred CCC--ceeecccccccccCchhhc---cCCCCCccchhHHHHHHHHHHh-CCCccccCcccccccchHHHHHHHhhhcch
Q 008828 383 CDS--HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKL 456 (552)
Q Consensus 383 ~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (552)
... .......||+.|+|||++. ...++.++|||||||++|||+| |..||..... ............
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~~ 247 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--------RQANILLGACSL 247 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--------HHHHHHTTCCCC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--------HHHHHHhccCCc
Confidence 322 2234456999999999997 4567889999999999999999 8888853211 001111110000
Q ss_pred hhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 457 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
. . ..........+.+++.+||+.||++|||+.|++++
T Consensus 248 ~-----~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 D-----C--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp T-----T--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred c-----c--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0 0 01122345668899999999999999999999864
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-38 Score=350.54 Aligned_cols=238 Identities=22% Similarity=0.291 Sum_probs=192.3
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC--CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccceeeeEeecCCc-----e
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ--DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE-----R 302 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~-----~ 302 (552)
++|.+.+.||+|+||+||+|... +++.||||++...........+.+|+.++..++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57888999999999999999975 5899999999754433445578899999999999999999999987665 6
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCC
Q 008828 303 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 382 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 382 (552)
++||||+++++|.+++.. .+++..+..|+.||+.||.|||++ +|+||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999999988765 699999999999999999999999 99999999999999985 899999999987653
Q ss_pred CCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccc
Q 008828 383 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 462 (552)
Q Consensus 383 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (552)
. ....||+.|+|||++.+.. +.++|||||||++|+|++|..|+....... +.
T Consensus 234 ~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------------~~-- 285 (681)
T 2pzi_A 234 F-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------------LP-- 285 (681)
T ss_dssp C-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------------CC--
T ss_pred C-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc--------------------cc--
Confidence 2 3346999999999997754 889999999999999999988876321100 00
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHhc
Q 008828 463 DLKNNYDRIELEEMVQVALLCTQYLPSLRPK-MSEVVRMLEG 503 (552)
Q Consensus 463 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~ 503 (552)
...........+.+++.+||+.||++||+ ++++.+.|..
T Consensus 286 --~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 286 --EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp --TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred --ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00001122367899999999999999996 4555555543
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.2e-38 Score=307.64 Aligned_cols=230 Identities=12% Similarity=0.032 Sum_probs=182.9
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc--hHHHHHHHHHHHhhccccccceeeeEeecCCceeEEE
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv~ 306 (552)
++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+..+..++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 46888899999999999999976 48999999997654332 2357889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||+++++|.+++... .....+..|+.|++.||.|||++ +|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 999999999999654 46667899999999999999999 99999999999999999999997443
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 466 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (552)
|++ .++.++|||||||++|||+||+.||............. ........ ...
T Consensus 175 ----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---------~~~~~~~~--~~~ 226 (286)
T 3uqc_A 175 ----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---------RDTAGQPI--EPA 226 (286)
T ss_dssp ----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---------BCTTSCBC--CHH
T ss_pred ----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---------HHhccCCC--Chh
Confidence 333 36789999999999999999999998543321100000 00000000 000
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 008828 467 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 504 (552)
Q Consensus 467 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 504 (552)
......+..+.+++.+||+.||++| |+.|+++.|+..
T Consensus 227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~ 263 (286)
T 3uqc_A 227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA 263 (286)
T ss_dssp HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence 0112234678999999999999999 999999999874
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.9e-38 Score=319.59 Aligned_cols=243 Identities=13% Similarity=0.149 Sum_probs=185.6
Q ss_pred cCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCcc-------CchHHHHHHHHHHHhhcc---------ccccceee
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAV---------HRNLLRLI 293 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~~~---------h~niv~l~ 293 (552)
++|.+.+.||+|+||+||+|+. +|+.||||+++.... ......+.+|+.+++.++ ||||+++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 5678889999999999999998 689999999975432 222357889999988886 66666665
Q ss_pred eE-----------------eec-------------CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 008828 294 GF-----------------CMT-------------TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 343 (552)
Q Consensus 294 ~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~L 343 (552)
++ +.. ....++||||+++|++.+.+.. ..+++..+..++.||+.||.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHH
Confidence 54 332 6788999999999987777754 5689999999999999999999
Q ss_pred h-hcCCCceEEcCCCCCceeeCCCC--------------------ceEEcccccceecCCCCCceeecccccccccCchh
Q 008828 344 H-EQCDPKIIHRDVKAANILLDEYY--------------------EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 402 (552)
Q Consensus 344 H-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~ 402 (552)
| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||+
T Consensus 178 H~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~ 248 (336)
T 2vuw_A 178 EASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDL 248 (336)
T ss_dssp HHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSGG
T ss_pred HHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChhh
Confidence 9 88 999999999999999887 8999999999876532 2369999999999
Q ss_pred hccCCCCCccchhHHHHH-HHHHHhCCCccccCcccccccchHHHHHHHhhhcchhh-hccccccCcCCHHHHHHHHHHH
Q 008828 403 LSTGQSSEKTDVFGFGIL-LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM-LVDKDLKNNYDRIELEEMVQVA 480 (552)
Q Consensus 403 ~~~~~~~~~~Dvws~Gv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li 480 (552)
+.+.. +.++||||+|++ .+++++|..||.. ..|....... .... ..............+.++.+|+
T Consensus 249 ~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 249 FTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN----------VLWLHYLTDK-MLKQMTFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp GCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH----------HHHHHHHHHH-HHHTCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred hcCCC-ccceehhhhhCCCCcccccccCCCcc----------hhhhhHHHHh-hhhhhccCcccchhhhhhcCHHHHHHH
Confidence 98766 889999998777 7788889888852 1122111110 0000 0111111222345778999999
Q ss_pred HHccCCCCCCCCCHHHHH-HH
Q 008828 481 LLCTQYLPSLRPKMSEVV-RM 500 (552)
Q Consensus 481 ~~cl~~dP~~RPs~~evl-~~ 500 (552)
.+||+.| |++|++ ++
T Consensus 317 ~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 317 RTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHGGGSS-----SHHHHHHHC
T ss_pred HHHhccC-----CHHHHHhcC
Confidence 9999976 899988 54
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3e-37 Score=305.59 Aligned_cols=225 Identities=19% Similarity=0.270 Sum_probs=176.9
Q ss_pred cCCCCC-CeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHH-hhccccccceeeeEeec----CCce
Q 008828 230 SNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMI-SLAVHRNLLRLIGFCMT----TTER 302 (552)
Q Consensus 230 ~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l-~~~~h~niv~l~~~~~~----~~~~ 302 (552)
++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456655 78999999999999974 6899999999642 3466888887 56689999999999876 6678
Q ss_pred eEEEeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCC---CCceEEcccccc
Q 008828 303 LLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 377 (552)
Q Consensus 303 ~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~ 377 (552)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999997643 699999999999999999999999 9999999999999998 789999999998
Q ss_pred eecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccccCcccccccchHHHHHHHhhhcchh
Q 008828 378 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 457 (552)
Q Consensus 378 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (552)
.... +..++.++|||||||++|||+||+.||.......... ....
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~------------~~~~ 212 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP------------GMKT 212 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C------------CSCC
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH------------HHHH
Confidence 7543 1345679999999999999999999996432211000 0000
Q ss_pred hhccccccCcCC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 458 MLVDKDLKNNYD----RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 458 ~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
.+.... ...+ ...+.++.+++.+||+.||++|||+.|++++
T Consensus 213 ~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 213 RIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000 0111 1234779999999999999999999999874
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2e-38 Score=328.09 Aligned_cols=240 Identities=15% Similarity=0.111 Sum_probs=179.7
Q ss_pred cCCCCCCeeeeeCceEEEEEEEC-CCcEEEEEEeccCccCc--hHHHHHHHHHHHhhccc-ccccee---------eeE-
Q 008828 230 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVH-RNLLRL---------IGF- 295 (552)
Q Consensus 230 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~~~h-~niv~l---------~~~- 295 (552)
..|...++||+|+||+||+|.+. +|+.||||+++...... ....+.+|+.++..++| +|...+ ...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45667789999999999999954 69999999997433222 24568899999998876 221111 111
Q ss_pred -----------eec-----CCceeEEEeeccCCChhhhhc-------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceE
Q 008828 296 -----------CMT-----TTERLLVYPYMSNGSVASRLK-------AKPSLDWATRKRIALGAARGLLYLHEQCDPKII 352 (552)
Q Consensus 296 -----------~~~-----~~~~~lv~e~~~~g~L~~~l~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iv 352 (552)
+.. ....+++|+++ +++|.+++. ....+++..+..++.||++||.|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111 12346667665 579998884 134588889999999999999999999 999
Q ss_pred EcCCCCCceeeCCCCceEEcccccceecCCCCCceeecccccccccCchhh----------ccCCCCCccchhHHHHHHH
Q 008828 353 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL----------STGQSSEKTDVFGFGILLL 422 (552)
Q Consensus 353 H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dvws~Gv~l~ 422 (552)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999865422 344567 999999999 5556889999999999999
Q ss_pred HHHhCCCccccCcccccccchHHHHHHHhhhcchhhhccccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 008828 423 ELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 500 (552)
Q Consensus 423 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 500 (552)
||+||+.||........ ...++... .. .++.+.+++.+||+.||++||++.|++++
T Consensus 309 elltg~~Pf~~~~~~~~----------------~~~~~~~~--~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG----------------SEWIFRSC--KN----IPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHSSCCCCTTGGGSC----------------SGGGGSSC--CC----CCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHCCCCCCCcchhhh----------------HHHHHhhc--cc----CCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 99999999975332111 11111110 11 23679999999999999999999988753
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97 E-value=3.5e-31 Score=283.36 Aligned_cols=186 Identities=15% Similarity=0.057 Sum_probs=132.9
Q ss_pred eeeeCceEEEEEE-ECCCcEEEEEEeccCccC---------chHHHHHHHHHHHhhc-cccccceeeeEeecCCceeEEE
Q 008828 238 VGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAI---------GGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 238 iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---------~~~~~~~~e~~~l~~~-~h~niv~l~~~~~~~~~~~lv~ 306 (552)
.+.|++|.+..++ .--|+.+|+|++...... ....+|.+|+++|+++ .|+||+++++++.+....||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666555544 224889999999654211 1234699999999999 6999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCc
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 386 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 386 (552)
||++|++|.+++...++++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+++...... .
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~-~ 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC-S 394 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC----C
T ss_pred ecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC-c
Confidence 999999999999988888765 5889999999999999 99999999999999999999999999998765432 2
Q ss_pred eeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCcc
Q 008828 387 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRAL 431 (552)
Q Consensus 387 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~ 431 (552)
.....+||+.|+|||++.+ .+..++|+||+|++++++.+|..++
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3345679999999999865 5677899999999998887765554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=1.6e-27 Score=253.57 Aligned_cols=185 Identities=16% Similarity=0.190 Sum_probs=145.5
Q ss_pred CCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCc-------hHHHHHHHHHHHhhccccccceeeeEeecCCceeEE
Q 008828 233 SSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG-------GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 233 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~~~h~niv~l~~~~~~~~~~~lv 305 (552)
...+.||+|+||+||+|.. .++.+++|......... ...++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 47888999875432211 123588999999999999999777777778888999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCC
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 385 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 385 (552)
|||+++|+|.+++.. +..++.|+++||.|||++ +|+||||||+|||++. .+||+|||+++.......
T Consensus 418 mE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 418 MSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 999999999999976 568999999999999999 9999999999999999 999999999998754322
Q ss_pred ce------eecccccccccCchhhcc--CCCCCccchhHHHHHHHHHHhCCCcc
Q 008828 386 HV------TTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRAL 431 (552)
Q Consensus 386 ~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv~l~elltg~~p~ 431 (552)
.. .....||+.|+|||++.. ..|+..+|+||..+-..+-+.++.++
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 11 235679999999999987 56888899999988888877765544
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.91 E-value=1.3e-24 Score=212.15 Aligned_cols=153 Identities=14% Similarity=0.072 Sum_probs=122.2
Q ss_pred HHHHHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-----------------chHHHHHHHHHHHhhccc
Q 008828 224 ELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-----------------GGEIQFQTEVEMISLAVH 286 (552)
Q Consensus 224 e~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~e~~~l~~~~h 286 (552)
.+......|.+.+.||+|+||.||+|...+|+.||+|+++..... .....+.+|+.++..++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 344445567777999999999999999977999999999643211 12346889999999998
Q ss_pred cccceeeeEeecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCC
Q 008828 287 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY 366 (552)
Q Consensus 287 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 366 (552)
| +++.+++. .+..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++ +
T Consensus 163 -~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 163 -G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp -T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-T
T ss_pred -C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-C
Confidence 5 66666543 356799999999999998 432 23557999999999999999 999999999999999 9
Q ss_pred CceEEcccccceecCCCCCceeecccccccccCchhhcc
Q 008828 367 YEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 405 (552)
Q Consensus 367 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 405 (552)
+.+||+|||+++. +..|.|||++..
T Consensus 229 ~~vkl~DFG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 229 EGIWIIDFPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp TEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred CcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence 9999999999963 345788998753
No 254
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=4.9e-20 Score=173.08 Aligned_cols=134 Identities=22% Similarity=0.227 Sum_probs=123.2
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 47899999999999988889999999999999999999888999999999999999999999655566899999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATGA 135 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~~ 135 (552)
++|+|++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|.|..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 99999988899999999999999999999998887554 6889999999998764
No 255
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=6.7e-20 Score=176.56 Aligned_cols=138 Identities=17% Similarity=0.172 Sum_probs=107.6
Q ss_pred CCCCCeeeeeCceEEEEEEE-CCCcE--EEEEEeccCccC-----------------------chHHHHHHHHHHHhhcc
Q 008828 232 FSSKNLVGKGGFGNVYKGYL-QDGTV--VAVKRLKDGNAI-----------------------GGEIQFQTEVEMISLAV 285 (552)
Q Consensus 232 ~~~~~~iG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~e~~~l~~~~ 285 (552)
|.+.+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|+..+..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998 67888 999997543111 00125788999999999
Q ss_pred cccc--ceeeeEeecCCceeEEEeeccC-C----ChhhhhccCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCceEEcCCC
Q 008828 286 HRNL--LRLIGFCMTTTERLLVYPYMSN-G----SVASRLKAKPSLDWATRKRIALGAARGLLYLH-EQCDPKIIHRDVK 357 (552)
Q Consensus 286 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~dlk 357 (552)
|+++ ..++++ ...++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEA---ELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCC
Confidence 8864 334432 367899999942 4 55555432 235578899999999999999 88 99999999
Q ss_pred CCceeeCCCCceEEcccccceecC
Q 008828 358 AANILLDEYYEAVVGDFGLAKLLD 381 (552)
Q Consensus 358 ~~Nill~~~~~~kl~Dfg~~~~~~ 381 (552)
|+|||++. .++|+|||++....
T Consensus 199 p~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEETT
T ss_pred HHHEEEcC--cEEEEECcccccCC
Confidence 99999998 99999999997653
No 256
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=2.5e-19 Score=169.33 Aligned_cols=132 Identities=20% Similarity=0.217 Sum_probs=120.6
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 57999999999999998999999999999999999998666677899999999999999999766677899999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
++|+|+ .+|..+..+++|+.|+|++|+|++.++..+. +.++|++|++.|.|.
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999 8899999999999999999999988776544 788999999999874
No 257
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2e-19 Score=168.91 Aligned_cols=134 Identities=19% Similarity=0.183 Sum_probs=122.0
Q ss_pred CcccEeccCCCCCccccc-ccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLS-SSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+.+++|+|++|++++..| ..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 357899999999998755 4689999999999999999988788999999999999999999977777899999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATGA 135 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~~ 135 (552)
|++|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.++|++|++.|.|..
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 999999988899999999999999999999998887655 6789999999998764
No 258
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.79 E-value=6.4e-19 Score=169.08 Aligned_cols=113 Identities=23% Similarity=0.206 Sum_probs=57.3
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
+|+.|+|++|++++..+..|+++++|++|+|++|.|++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 34555555555555444455555555555555555554444445555555555555555554333444555555555555
Q ss_pred cccccCCCCccccccccccEEeccCCCCCCCCC
Q 008828 83 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 115 (552)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 115 (552)
+|+|++..+..|..+++|+.|+|++|+|++.++
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 555553333344445555555555555554444
No 259
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=2.7e-18 Score=166.81 Aligned_cols=132 Identities=22% Similarity=0.235 Sum_probs=66.9
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 34555555555555444444555555555555555555444444455555555555555555443444455555555555
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICAT 133 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~ 133 (552)
++|+|++..+..+..+++|+.|+|++|++++.++..+. +.+++++|++.|.+
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 55555544444445555555555555555554443322 44555555555443
No 260
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.76 E-value=3.6e-18 Score=158.92 Aligned_cols=133 Identities=22% Similarity=0.233 Sum_probs=119.3
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 57999999999999887778999999999999999999766667899999999999999999666667899999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
++|+|++..+..+..+++|+.|+|++|+|++.++..+. +.+++++|++.|.+.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99999977777789999999999999999988876544 788999999998765
No 261
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=3.9e-18 Score=167.11 Aligned_cols=132 Identities=22% Similarity=0.200 Sum_probs=81.6
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|+++. +|..+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 77 ~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 155 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155 (290)
T ss_dssp TTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEEC
Confidence 455666666666553 4556666666666666666666555556666666666666666666544455666666666666
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCccccCCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICATG 134 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c~~~ 134 (552)
++|+|++..+..|..+++|+.|+|++|+|+..++..+. +.++|++|++.|.|+
T Consensus 156 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 156 ANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp TTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 66666644444556666666666666666654444332 456667777766653
No 262
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.75 E-value=5.4e-18 Score=164.49 Aligned_cols=130 Identities=22% Similarity=0.234 Sum_probs=83.3
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|+++++.+..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 35677777777777665555566677777777777777655555566667777777777776655555566666666666
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 130 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~ 130 (552)
|++|+|++..+..|..+++|+.|+|++|++++.++..+. +.++|++|.+.
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC
Confidence 666666644444566666666666666666665554332 45566666554
No 263
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.75 E-value=1.4e-18 Score=193.50 Aligned_cols=115 Identities=35% Similarity=0.573 Sum_probs=77.4
Q ss_pred CCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccccccCCCCccccccccccEEe
Q 008828 25 LTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLD 104 (552)
Q Consensus 25 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 104 (552)
+++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|+.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 45566666666666666676777777777777777777777777777777777777777777777777777777777777
Q ss_pred ccCCCCCCCCCCccc----CcccccCCccccCCCCCCCCC
Q 008828 105 LSYNNLSGPVPSFHA----KTFNITGNSLICATGAEEDCF 140 (552)
Q Consensus 105 l~~N~l~~~~~~~~~----~~~~l~~N~~~c~~~~~~~c~ 140 (552)
|++|+|+|.+|.... ...++.||+..|+.+.. .|.
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~ 749 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCD 749 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCC
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCC
Confidence 777777776665321 34556677777776544 553
No 264
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=153.66 Aligned_cols=127 Identities=23% Similarity=0.312 Sum_probs=114.1
Q ss_pred cEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccc
Q 008828 5 CYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNN 84 (552)
Q Consensus 5 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 84 (552)
+++++++|+++. +|..+ .++|++|+|++|.|+ .+|..|.++++|+.|+|++|.|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 678999999886 66655 479999999999998 78899999999999999999999877788999999999999999
Q ss_pred cccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCCC
Q 008828 85 SLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATGA 135 (552)
Q Consensus 85 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~~ 135 (552)
+|++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|+|..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 99988888999999999999999999988876554 7889999999998764
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=5.8e-18 Score=155.36 Aligned_cols=127 Identities=22% Similarity=0.331 Sum_probs=76.8
Q ss_pred cEeccCCCCCcccccccccCCCCCcEEecccCccCCCCch-hhcCCCCCCEEEccCCcCCCCCCccccCCcccccccccc
Q 008828 5 CYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPT-EIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 83 (552)
Q Consensus 5 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 83 (552)
++|++++|+++. +|..+. .+|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 456666666643 444442 2666666666666644443 356666666666666666655566666666666666666
Q ss_pred ccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 84 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 84 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.++|++|++.|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 666655555566666666666666666665554433 455666666666654
No 266
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.73 E-value=4.3e-18 Score=166.52 Aligned_cols=132 Identities=22% Similarity=0.223 Sum_probs=62.5
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
+|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|+
T Consensus 106 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 185 (285)
T 1ozn_A 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185 (285)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECC
Confidence 44444444444444444444444444444444444443333334444444455555444443333334444555555555
Q ss_pred cccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 83 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
+|++++..|..+..+++|+.|+|++|++++.++..+. +.+++++|++.|.+.
T Consensus 186 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 186 QNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 5555444444555555555555555555544433221 445555555555443
No 267
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=8.8e-18 Score=154.13 Aligned_cols=131 Identities=20% Similarity=0.248 Sum_probs=114.6
Q ss_pred cccEeccCCCCCcccccc-cccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSS-SIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
+|++|+|++|++++..+. .|+.+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 789999999999987665 5999999999999999999888999999999999999999999888888999999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCccccCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICAT 133 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c~~ 133 (552)
++|+|++..|..+..+++|+.|+|++|++++..+-.+. +...+.++...|..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCS
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCC
Confidence 99999999999999999999999999999987663222 23345555555654
No 268
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.72 E-value=2.5e-17 Score=157.91 Aligned_cols=132 Identities=23% Similarity=0.287 Sum_probs=114.3
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 57899999999999998888899999999999999999977777888999999999999999966666688899999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
|++|+|++..+..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999999976666888999999999999999988776544 6788999999886
No 269
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.72 E-value=4.7e-18 Score=172.16 Aligned_cols=133 Identities=21% Similarity=0.162 Sum_probs=67.5
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 44555555555555544445555555555555555555444444555555555555555555444455555555555555
Q ss_pred ccccccCCCCccc---cccccccEEeccCCCCCCCCCCccc-------CcccccCCccccCCC
Q 008828 82 NNNSLTGAIPPSL---SNMSQLAFLDLSYNNLSGPVPSFHA-------KTFNITGNSLICATG 134 (552)
Q Consensus 82 ~~N~l~~~~p~~~---~~l~~L~~l~l~~N~l~~~~~~~~~-------~~~~l~~N~~~c~~~ 134 (552)
++|+|++..+..| ..+++|+.|+|++|+|++.++..+. +.++|++|++.|+|.
T Consensus 144 ~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 144 SQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 5555553222222 3455555555555555544432211 345666666666543
No 270
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.72 E-value=5.6e-18 Score=169.53 Aligned_cols=144 Identities=13% Similarity=0.110 Sum_probs=100.5
Q ss_pred hcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccC-------------chHHHHHHHHHHHhhccccccceeeeE
Q 008828 229 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-------------GGEIQFQTEVEMISLAVHRNLLRLIGF 295 (552)
Q Consensus 229 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~e~~~l~~~~h~niv~l~~~ 295 (552)
..-|.+...||+|+||.||+|...+|+.||||+++..... ........+..+.....|+|+.+++..
T Consensus 94 g~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 94 KDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp TSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 3448889999999999999999989999999998632110 001112222222223334444433322
Q ss_pred eec------CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCC--
Q 008828 296 CMT------TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY-- 367 (552)
Q Consensus 296 ~~~------~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-- 367 (552)
... ....++||||+++++|..+... +....++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 174 gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 174 GFPVPEPIAQSRHTIVMSLVDALPMRQVSSV------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp TCSCCCEEEEETTEEEEECCSCEEGGGCCCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECS
T ss_pred CCCCCeeeeccCceEEEEecCCccHhhhccc------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCc
Confidence 111 1234799999999888765432 23467889999999999998 999999999999998776
Q ss_pred --------ceEEcccccceecC
Q 008828 368 --------EAVVGDFGLAKLLD 381 (552)
Q Consensus 368 --------~~kl~Dfg~~~~~~ 381 (552)
.+.|+||+-+....
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEETT
T ss_pred ccccccccceEEEEeCCcccCC
Confidence 38999999876544
No 271
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.71 E-value=5.6e-18 Score=168.06 Aligned_cols=132 Identities=27% Similarity=0.448 Sum_probs=74.3
Q ss_pred CCcccEeccCCCCCcccccccccCCC-CCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCcc----------
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLT-NLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPST---------- 69 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---------- 69 (552)
|++|++|+|++|.+++.+|..+..++ +|++|+|++|++++.+|..|.+++ |+.|+|++|.+++..|..
T Consensus 148 l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 226 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKI 226 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEE
T ss_pred CCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEE
Confidence 35666666666666666666666665 666666666666555555554444 444444444444444444
Q ss_pred -------------ccCCccccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCccccC
Q 008828 70 -------------VSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICA 132 (552)
Q Consensus 70 -------------~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c~ 132 (552)
+..+++|+.|+|++|+|++.+|..+..+++|+.|+|++|+|++.+|.... +.+++++|+..|+
T Consensus 227 ~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp ECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEES
T ss_pred ECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccC
Confidence 44455555555555555555555555556666666666666555554311 4555666665555
Q ss_pred C
Q 008828 133 T 133 (552)
Q Consensus 133 ~ 133 (552)
.
T Consensus 307 ~ 307 (313)
T 1ogq_A 307 S 307 (313)
T ss_dssp T
T ss_pred C
Confidence 4
No 272
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.71 E-value=2.5e-18 Score=181.01 Aligned_cols=30 Identities=20% Similarity=-0.003 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhhccccccceeeeEeecCC
Q 008828 271 EIQFQTEVEMISLAVHRNLLRLIGFCMTTT 300 (552)
Q Consensus 271 ~~~~~~e~~~l~~~~h~niv~l~~~~~~~~ 300 (552)
..+|..|++++.+++|+|+|+++|||....
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 557999999999999999999999997654
No 273
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=1.9e-17 Score=155.32 Aligned_cols=115 Identities=18% Similarity=0.198 Sum_probs=109.1
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|+++++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 57899999999999998888999999999999999999988888899999999999999999988899999999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 115 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 115 (552)
|++|+|++..|..|..+++|+.|+|++|++.+..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999998889999999999999999999998765
No 274
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.71 E-value=1.4e-17 Score=164.68 Aligned_cols=133 Identities=20% Similarity=0.284 Sum_probs=76.2
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCC-CCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISG-HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++|++|+|++|.+.+..+..|..+++|++|+|++|.+++ .+|..|.++++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 455555555555555555555556666666666666554 3455555666666666666666654455566666666666
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc------CcccccCCccccCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLICATG 134 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~------~~~~l~~N~~~c~~~ 134 (552)
|++|++++..+..+..+++|+.|+|++|++++.+|..+. +.++|++|++.|.|.
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 666666544444555566666666666666655443322 445566666665543
No 275
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.70 E-value=2e-17 Score=172.98 Aligned_cols=133 Identities=21% Similarity=0.234 Sum_probs=124.6
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|.++++|+.|+|++|.+++..|..|..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 57999999999999999999999999999999999999888999999999999999999999777889999999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
++|++++..|..|..+++|+.|+|++|+|++.++..+. +.+++++|++.|.++
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999988899999999999999999999998876643 789999999999876
No 276
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.69 E-value=6.4e-18 Score=167.65 Aligned_cols=129 Identities=30% Similarity=0.501 Sum_probs=114.3
Q ss_pred CcccEeccCCCCCcc--cccccccCCCCCcEEeccc-CccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccc
Q 008828 2 VLLCYRGAPSQNLSG--TLSSSIGNLTNLQLVLLQN-NNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQY 78 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 78 (552)
.+|+.|+|++|++.+ .+|..|+++++|++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468899999999998 8899999999999999995 9999899999999999999999999998889999999999999
Q ss_pred cccccccccCCCCccccccccccEEeccCCCCCCCCCCccc------CcccccCCccc
Q 008828 79 LRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLI 130 (552)
Q Consensus 79 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~------~~~~l~~N~~~ 130 (552)
|+|++|+|++.+|..+..+++|+.|+|++|++++.+|..+. +.+++++|.+.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~ 187 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeee
Confidence 99999999988999999999999999999999877765432 66788888875
No 277
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.69 E-value=1.4e-16 Score=154.51 Aligned_cols=132 Identities=24% Similarity=0.285 Sum_probs=114.4
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|+.|+|++|++++..+..|.++++|++|+|++|.|+...+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 46899999999999877778999999999999999999666666788999999999999999666677899999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICAT 133 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~ 133 (552)
++|++++..+..|..+++|+.|+|++|.|++.++..+. +.+++++|.+...+
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 99999977778889999999999999999987776543 67889999886544
No 278
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.69 E-value=3.4e-17 Score=182.38 Aligned_cols=83 Identities=30% Similarity=0.557 Sum_probs=60.6
Q ss_pred CCCCCEEEccCCcCCCCCCccccCCccccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----Cccc
Q 008828 49 LSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFN 123 (552)
Q Consensus 49 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~ 123 (552)
+++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..+..+++|+.|||++|+++|.+|..+. +.++
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 35566777777777777777777777777777777777777777777777777777777777777776544 5677
Q ss_pred ccCCcccc
Q 008828 124 ITGNSLIC 131 (552)
Q Consensus 124 l~~N~~~c 131 (552)
+++|++..
T Consensus 711 ls~N~l~g 718 (768)
T 3rgz_A 711 LSNNNLSG 718 (768)
T ss_dssp CCSSEEEE
T ss_pred CcCCcccc
Confidence 77777653
No 279
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.68 E-value=2e-16 Score=153.50 Aligned_cols=130 Identities=25% Similarity=0.326 Sum_probs=99.6
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|++++. ..++.+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46788888888887763 3677888888888888888866666678888888888888888866666678888888888
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
|++|+|++..+..+..+++|+.|+|++|+|++.++..+. +.+++++|.+...
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 888888866666677888888888888888877765533 6777888877543
No 280
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.68 E-value=9.1e-17 Score=150.72 Aligned_cols=115 Identities=18% Similarity=0.152 Sum_probs=106.6
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 57899999999999999999999999999999999999966666689999999999999999988889999999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 115 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 115 (552)
|++|+|++..+..|..+++|+.|+|++|++.....
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 99999998777889999999999999999987544
No 281
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.67 E-value=1.2e-16 Score=155.45 Aligned_cols=130 Identities=20% Similarity=0.221 Sum_probs=101.5
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 46788888888888887777888888888888888888877777888888888888888888866665788888888888
Q ss_pred cccccccCC-CCccccccccccEEeccCCCCCCCCCCccc-----C----cccccCCccc
Q 008828 81 LNNNSLTGA-IPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----K----TFNITGNSLI 130 (552)
Q Consensus 81 l~~N~l~~~-~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~----~~~l~~N~~~ 130 (552)
|++|++++. +|..+..+++|+.|+|++|++++.++..+. + .+++++|.+.
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~ 190 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCC
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCccc
Confidence 888888753 578888888888888888888876654332 1 4556666554
No 282
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=3.3e-16 Score=141.61 Aligned_cols=128 Identities=20% Similarity=0.215 Sum_probs=103.0
Q ss_pred ccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccccc
Q 008828 4 LCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 83 (552)
Q Consensus 4 l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 83 (552)
.+.+++++|+++. +|..+ .++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4678888888876 45444 47889999999999866666778899999999999999866666678899999999999
Q ss_pred ccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 84 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 84 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
|+|++..+..+..+++|+.|+|++|+|++.++..+. +.++|++|++.|.++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999876667788889999999999999887776543 678888998887653
No 283
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.67 E-value=2.9e-16 Score=153.79 Aligned_cols=127 Identities=23% Similarity=0.205 Sum_probs=82.7
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|+.|+|++|++++..+..|.++++|+.|+|++|.|++ ++. ...+++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EEC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 357777777777777777777777777777777777763 332 256666666666666666 55666666666666666
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCcccc
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 131 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c 131 (552)
++|+|++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|.+..
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 66666655555666666666666666666665554432 456666666553
No 284
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=6.6e-17 Score=144.87 Aligned_cols=129 Identities=21% Similarity=0.182 Sum_probs=111.9
Q ss_pred CcccEeccCCCCCc-ccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLS-GTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++|+.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+.++++|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 67999999999998 67888899999999999999999965 7799999999999999999977888888899999999
Q ss_pred cccccccCCC-CccccccccccEEeccCCCCCCCCC---Cccc-----CcccccCCccccC
Q 008828 81 LNNNSLTGAI-PPSLSNMSQLAFLDLSYNNLSGPVP---SFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~~---~~~~-----~~~~l~~N~~~c~ 132 (552)
|++|+|++.. +..+..+++|+.|++++|++++.++ ..+. +.+++++|.+.-.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 9999999542 2789999999999999999998776 2222 6778888876544
No 285
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.66 E-value=2.5e-16 Score=153.93 Aligned_cols=131 Identities=21% Similarity=0.209 Sum_probs=108.7
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCc-CCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNF-FTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~ 80 (552)
++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. +....|..|..+++|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 468889999999888777788888999999999998887778888888999999999987 7755577888888999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
|++|++++..|..+..+++|+.|+|++|++++.++..+. +.+++++|.+...
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 999998877788888888899999999988887766443 6788888877643
No 286
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.66 E-value=1.7e-16 Score=165.14 Aligned_cols=132 Identities=22% Similarity=0.246 Sum_probs=102.3
Q ss_pred CcccEeccCCCCCcc-cccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSG-TLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++|++|+|++|+..+ +.+..|.++++|++|+|++|.|+ .+| .+.++++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 237 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 237 (440)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEE
Confidence 344444444422222 22235667777777777788777 555 377888888888888888877788899999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATGA 135 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~~ 135 (552)
|++|+|++..+..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|+|..
T Consensus 238 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 238 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred CCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 999999988888899999999999999999988877654 6789999999998864
No 287
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.66 E-value=1e-16 Score=174.46 Aligned_cols=135 Identities=20% Similarity=0.288 Sum_probs=123.5
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCcc-CCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNI-SGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 79 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l-~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 79 (552)
+++++.++++.|++.+..+..+..+++|+.|+|++|.+ .+.+|..|..+++|+.|+|++|+|++..|..|.++++|+.|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 46789999999999999999999999999999999975 44578889999999999999999998889999999999999
Q ss_pred ccccccccCCCCccccccccccEEeccCCCCCCCCCCccc------CcccccCCccccCCCC
Q 008828 80 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLICATGA 135 (552)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~------~~~~l~~N~~~c~~~~ 135 (552)
+|++|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.++|++|++.|+|..
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999999988888999999999999999999999887653 5789999999999874
No 288
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=2.2e-16 Score=144.86 Aligned_cols=113 Identities=24% Similarity=0.262 Sum_probs=104.1
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|+++. +|..|.++++|+.|+|++|.|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 479999999999985 7789999999999999999999888888999999999999999999888888999999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 115 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 115 (552)
++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9999996666779999999999999999987554
No 289
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.4e-16 Score=142.54 Aligned_cols=115 Identities=22% Similarity=0.185 Sum_probs=104.4
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+..|+.+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 57999999999999887788999999999999999999776777899999999999999999776677899999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS 116 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 116 (552)
++|+|++..+..+..+++|+.|+|++|++.+.+|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99999966666678999999999999999987763
No 290
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.66 E-value=1.5e-16 Score=161.02 Aligned_cols=131 Identities=25% Similarity=0.201 Sum_probs=117.2
Q ss_pred CcccEeccCCCCCccccccccc-CCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIG-NLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+.++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 3588999999999998888887 999999999999999977778899999999999999999976677899999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCcc--------cCcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH--------AKTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~--------~~~~~l~~N~~~c~ 132 (552)
|++|+|++..|..|..+++|+.|+|++|+|++.++..+ .+.++|++|.+...
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 99999998888999999999999999999998777654 16789999988643
No 291
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.65 E-value=4.8e-16 Score=144.45 Aligned_cols=128 Identities=20% Similarity=0.195 Sum_probs=112.0
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 57899999999999987777889999999999999999977677789999999999999999976666789999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCcccCcccccCCccc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHAKTFNITGNSLI 130 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~l~~N~~~ 130 (552)
|++|+|++..+..+..+++|+.|+|++|++.+..|.+ +.+++..|.+.
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l--~~L~~~~n~~~ 178 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI--RYLSEWINKHS 178 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTT--HHHHHHHHHCT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCCCH--HHHHHHHHhCC
Confidence 9999999777777999999999999999999877643 45555566554
No 292
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.65 E-value=9.1e-17 Score=174.27 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=108.9
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCC-CCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISG-HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 79 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 79 (552)
+++|++|++++|.+++..|..|+++++|++|+|++|.+++ .+|..|.++++|+.|+|++|++++..|..|..+++|+.|
T Consensus 423 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 4678888888888888788888888888888888888886 367778888888888888888887777888888888888
Q ss_pred ccccccccCCCCccccccccccEEeccCCCCCCCCCCcc-----cCcccccCCccccCCCC
Q 008828 80 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH-----AKTFNITGNSLICATGA 135 (552)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~-----~~~~~l~~N~~~c~~~~ 135 (552)
+|++|++++..|..+..+++|+.|+|++|+|+..++.+. .+.+++++|++.|.|+.
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 888888887778888888888888888888886554421 25678888888888764
No 293
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.65 E-value=1.7e-16 Score=172.73 Aligned_cols=131 Identities=19% Similarity=0.148 Sum_probs=116.5
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
+++++|||++|+|+++.+..|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..+..|.+|++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999988889999999999999999999777888999999999999999999666677999999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCC-CCCccc-----CcccccCCccccC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP-VPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~~~~~~-----~~~~l~~N~~~c~ 132 (552)
++|+|++..+..|..+++|+.|+|++|.+++. .|..+. +.+++++|.+...
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 99999977777899999999999999999874 354433 7889999988654
No 294
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.65 E-value=1.7e-16 Score=158.36 Aligned_cols=127 Identities=21% Similarity=0.314 Sum_probs=104.5
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcC---------CCCCCEEEccCCcCCCCCCcccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGK---------LSKLLTLDLSNNFFTGPIPSTVS 71 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~p~~~~ 71 (552)
|++|++|+|++|+++ .+|..|+++++|++|+|++|.+.+.+|..+.. +++|+.|+|++|+++ .+|..++
T Consensus 126 l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~ 203 (328)
T 4fcg_A 126 FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA 203 (328)
T ss_dssp GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG
T ss_pred cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc
Confidence 467889999999888 57888888999999999988887788877654 888888888888888 7888888
Q ss_pred CCccccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccc
Q 008828 72 HLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 130 (552)
Q Consensus 72 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~ 130 (552)
.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++.+.+|..+. +.+++++|.+.
T Consensus 204 ~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 266 (328)
T 4fcg_A 204 NLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL 266 (328)
T ss_dssp GCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTC
T ss_pred CCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCch
Confidence 8888888888888888 4666788888888888888888888777654 67788887654
No 295
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.65 E-value=3.5e-16 Score=147.70 Aligned_cols=114 Identities=21% Similarity=0.188 Sum_probs=105.8
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
|++|++|+|++|++.++.+..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 578999999999998877788999999999999999999777777899999999999999999 8899999999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 115 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 115 (552)
|++|+|++..+..|..+++|+.|+|++|++.+..+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999997767789999999999999999998776
No 296
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.64 E-value=3.2e-16 Score=163.64 Aligned_cols=113 Identities=24% Similarity=0.330 Sum_probs=95.1
Q ss_pred cccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccccccCCCCccccccccc
Q 008828 21 SIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQL 100 (552)
Q Consensus 21 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 100 (552)
.|.++++|++|+|++|+|+ .+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..|..|..+++|
T Consensus 191 ~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 268 (452)
T 3zyi_A 191 AFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASL 268 (452)
T ss_dssp TTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hccCCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCC
Confidence 4667777777777778777 344 47788888888888888887778889999999999999999998888889999999
Q ss_pred cEEeccCCCCCCCCCCccc-----CcccccCCccccCCCC
Q 008828 101 AFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATGA 135 (552)
Q Consensus 101 ~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~~ 135 (552)
+.|+|++|+|++.++..+. +.++|++|++.|+|..
T Consensus 269 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 269 VELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred CEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 9999999999988877654 6789999999999874
No 297
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.64 E-value=1e-16 Score=180.40 Aligned_cols=132 Identities=27% Similarity=0.324 Sum_probs=89.9
Q ss_pred CcccEeccCCCCCcccccc-cccCCCCCcEEecccCccC-----CCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcc
Q 008828 2 VLLCYRGAPSQNLSGTLSS-SIGNLTNLQLVLLQNNNIS-----GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLET 75 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 75 (552)
++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++..|..|..+++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhh
Confidence 4566666666666553332 3445666666666666665 233445667777777777777777666666777777
Q ss_pred ccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc--CcccccCCccccCCCC
Q 008828 76 LQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLICATGA 135 (552)
Q Consensus 76 L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~--~~~~l~~N~~~c~~~~ 135 (552)
|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+. +.+++++|++.|.|..
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 77777777777755555544 6777777777777777776654 6789999999998864
No 298
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.64 E-value=3.4e-16 Score=156.21 Aligned_cols=129 Identities=20% Similarity=0.235 Sum_probs=110.3
Q ss_pred CCcccEeccCCCCCcccccccccC---------CCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCcccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGN---------LTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS 71 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 71 (552)
|++|++|+|++|++.+.+|..+.. +++|++|+|++|+|+ .+|..+.++++|+.|+|++|+++ .+|..+.
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhc
Confidence 578899999998888888877654 899999999999998 78888999999999999999998 5677788
Q ss_pred CCccccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCcccc
Q 008828 72 HLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 131 (552)
Q Consensus 72 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c 131 (552)
.+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+. +.++|++|++..
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 899999999999998888898899999999999999988888886554 678888887653
No 299
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.63 E-value=8.9e-16 Score=137.72 Aligned_cols=111 Identities=24% Similarity=0.281 Sum_probs=99.7
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
+.+.|++++|+++. +|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35789999999987 67666 4899999999999998889999999999999999999997767778999999999999
Q ss_pred cccccCCCCccccccccccEEeccCCCCCCCCCC
Q 008828 83 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS 116 (552)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 116 (552)
+|+|++..+..|..+++|+.|+|++|++++.++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9999977777899999999999999999987763
No 300
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.6e-16 Score=139.27 Aligned_cols=112 Identities=20% Similarity=0.217 Sum_probs=101.9
Q ss_pred CcccEeccCCCCCc-ccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLS-GTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++|+.|++++|+++ +.+|..++.+++|++|+|++|.+++. ..+.++++|++|+|++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57999999999998 67888999999999999999999965 7799999999999999999977888888899999999
Q ss_pred cccccccCC-CCccccccccccEEeccCCCCCCCCC
Q 008828 81 LNNNSLTGA-IPPSLSNMSQLAFLDLSYNNLSGPVP 115 (552)
Q Consensus 81 l~~N~l~~~-~p~~~~~l~~L~~l~l~~N~l~~~~~ 115 (552)
+++|++++. .+..+..+++|+.|++++|++++.++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999953 34789999999999999999998766
No 301
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.63 E-value=8.3e-16 Score=149.49 Aligned_cols=130 Identities=19% Similarity=0.151 Sum_probs=116.5
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36999999999999988889999999999999999999777778999999999999999999777788999999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCC-CCCccc-----CcccccCCcccc
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP-VPSFHA-----KTFNITGNSLIC 131 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~~~~~~-----~~~~l~~N~~~c 131 (552)
++|++.+..+..+..+++|+.|+|++|.+++. .|..+. +.+++++|.+..
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc
Confidence 99999977777899999999999999999974 365544 788999998754
No 302
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.62 E-value=4.7e-16 Score=168.67 Aligned_cols=133 Identities=24% Similarity=0.285 Sum_probs=104.8
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCC---CchhhcCCCCCCEEEccCCcCCCCCCccccCCcccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGH---IPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQ 77 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 77 (552)
+++|++|+|++|.+.+..|..|+.+++|++|+|++|.+++. .+..+.++++|+.|+|++|++++..|..|..+++|+
T Consensus 424 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp CTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 45677778888877777777777888888888888887752 235677788888888888888877777888888888
Q ss_pred ccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 78 YLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 78 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
.|+|++|++++..|..+..+++| .|+|++|++++.+|..+. +.+++++|++.|.|+
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 88888888887888888888888 888888888887776543 678888999888765
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.61 E-value=6.6e-16 Score=152.57 Aligned_cols=131 Identities=22% Similarity=0.314 Sum_probs=99.5
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCc-hhhcCCCCCCEEEccCCcCCCCCCccccCCcccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIP-TEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 79 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 79 (552)
+++|++|+|++|.+.+ +|..+..+++|++|+|++|.+++..+ ..+.++++|++|+|++|.+.+..|..+..+++|+.|
T Consensus 77 ~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 4678888888888775 66668888888888888888875444 467788888888888888877777777888888888
Q ss_pred ccccccccC-CCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 80 RLNNNSLTG-AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 80 ~l~~N~l~~-~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
+|++|.+.+ .+|..+..+++|+.|+|++|++++.+|..+. +.+++++|.+...
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 888888875 4677788888888888888888877665543 5677778877544
No 304
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.61 E-value=6.6e-16 Score=166.11 Aligned_cols=133 Identities=20% Similarity=0.252 Sum_probs=91.4
Q ss_pred CcccEeccCCCCCccccc-ccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCC-CCCCccccCCcccccc
Q 008828 2 VLLCYRGAPSQNLSGTLS-SSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFT-GPIPSTVSHLETLQYL 79 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L 79 (552)
++|++|++++|.+.+..| ..+.++++|++|+|++|.+++..|..|.++++|+.|+|++|.++ +.+|..+..+++|+.|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 456666666666665544 35666677777777777776666666777777777777777775 4566677777777777
Q ss_pred ccccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 80 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
+|++|++++..|..+..+++|+.|+|++|++++.++..+. +.+++++|++.|.++
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 7777777766677777777777777777777776665443 566777777777654
No 305
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.60 E-value=2.2e-15 Score=135.57 Aligned_cols=110 Identities=23% Similarity=0.249 Sum_probs=97.1
Q ss_pred ccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccccc
Q 008828 4 LCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 83 (552)
Q Consensus 4 l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 83 (552)
-+.+++++|++.. +|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 3689999999975 676663 8999999999999988899999999999999999999966556689999999999999
Q ss_pred ccccCCCCccccccccccEEeccCCCCCCCCCC
Q 008828 84 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS 116 (552)
Q Consensus 84 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 116 (552)
|+|++..+..|..+++|+.|+|++|++...++.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 999966666799999999999999999977653
No 306
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=2.6e-15 Score=162.42 Aligned_cols=130 Identities=18% Similarity=0.105 Sum_probs=86.9
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
|++|++|+|++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|+++++|+.|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 35677777777777776666777777777777777777766666667777777777777777744444456777777777
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc--CcccccCCccc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLI 130 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~--~~~~l~~N~~~ 130 (552)
|++|.|++..|..|..+++|+.|+|++|.|++.+...+. ..+++++|.+.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccc
Confidence 777777766666677777777777777777765443333 45555555543
No 307
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.59 E-value=1.6e-15 Score=166.76 Aligned_cols=135 Identities=20% Similarity=0.219 Sum_probs=104.0
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCc--------hhhcCCCCCCEEEccCCcCCCCCCccccC
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIP--------TEIGKLSKLLTLDLSNNFFTGPIPSTVSH 72 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--------~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 72 (552)
+++|++|+|++|+++++.+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.+
T Consensus 479 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 558 (680)
T 1ziw_A 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD 558 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccc
Confidence 3567888888888887777778888888888888888874311 23677888888888888888433446888
Q ss_pred CccccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc------CcccccCCccccCCCC
Q 008828 73 LETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLICATGA 135 (552)
Q Consensus 73 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~------~~~~l~~N~~~c~~~~ 135 (552)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++..+. +.+++++|++.|.|..
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 88888888888888866666778888888899999888887775432 6788999999998764
No 308
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.59 E-value=1.5e-15 Score=159.75 Aligned_cols=132 Identities=21% Similarity=0.163 Sum_probs=102.4
Q ss_pred ccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccccc
Q 008828 4 LCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 83 (552)
Q Consensus 4 l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 83 (552)
|++|+|++|++.+.+|..+....+|+.|+|++|+|++..+..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 33333333333333333333334566666667778744446788999999999999999977777899999999999999
Q ss_pred ccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCCC
Q 008828 84 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATGA 135 (552)
Q Consensus 84 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~~ 135 (552)
|++++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|.|..
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 999988899999999999999999999988876654 7889999999998754
No 309
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.59 E-value=4.2e-15 Score=152.04 Aligned_cols=111 Identities=17% Similarity=0.125 Sum_probs=52.3
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|..+++|+.|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 34445555555444444444444555555555555554444444444555555555555544222222344445555555
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG 112 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 112 (552)
++|++++..|..+..+++|+.|++++|++++
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 5555444444444444455555555554444
No 310
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.59 E-value=2.1e-15 Score=158.64 Aligned_cols=131 Identities=15% Similarity=0.132 Sum_probs=110.7
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|+.|+|++|++++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 46889999999999888888999999999999999999877888999999999999999998555566888999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
++|++.+..|..|..+++|+.|+|++|.+++..+..+. +.++|++|.+...
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 99999888888888899999999999998877765544 6778888876543
No 311
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.58 E-value=3.9e-15 Score=161.42 Aligned_cols=130 Identities=18% Similarity=0.146 Sum_probs=95.6
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 45777788888777777777777888888888888777666777777778888888888777666777777777888888
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCC-CCCCccc-----CcccccCCcccc
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG-PVPSFHA-----KTFNITGNSLIC 131 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~-~~~~~~~-----~~~~l~~N~~~c 131 (552)
++|++++..+..+..+++|+.|+|++|.+++ .+|..+. +.+++++|.+..
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 7777776665677777777777777777775 3354433 566777776654
No 312
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.58 E-value=2.3e-15 Score=160.13 Aligned_cols=109 Identities=25% Similarity=0.302 Sum_probs=72.9
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCC--CCchhhcCCCCCCEEEccCCcCCCCCCcc-ccCCcccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISG--HIPTEIGKLSKLLTLDLSNNFFTGPIPST-VSHLETLQ 77 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~ 77 (552)
+++|++|+|++|++++..|..++++++|++|+|++|++++ .+|..+.++++|+.|+|++|.+++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4678888888888888778888888888888888888875 45567778888888888888887645543 55555555
Q ss_pred ccccccccccCCCCccccccccccEEeccCCCCC
Q 008828 78 YLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLS 111 (552)
Q Consensus 78 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 111 (552)
.|+|++|++++..|..+. ++|+.|+|++|+|+
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 555555555444433332 34444444444444
No 313
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.58 E-value=1.5e-15 Score=139.78 Aligned_cols=127 Identities=21% Similarity=0.282 Sum_probs=103.0
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
|++|++|++++|++.. +| .+..+++|++|++++|.++ .+ ..+.++++|++|+|++|++++..|..++.+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 3578899999999885 55 6888999999999999776 33 4688899999999999999876788888999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCC-CCCCCCCcc----cCcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNN-LSGPVPSFH----AKTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~-l~~~~~~~~----~~~~~l~~N~~~c~ 132 (552)
|++|++++..|..+..+++|+.|+|++|+ ++.. |.+. .+.+++++|.+...
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~l~~n~i~~~ 174 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDY 174 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEECTTBCCCCC
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEECCCCCCcCh
Confidence 99999987778888899999999999998 6654 3321 16788888887543
No 314
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.58 E-value=8e-16 Score=169.40 Aligned_cols=127 Identities=25% Similarity=0.337 Sum_probs=111.6
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|+.|+|++|.+.. +|..+.++++|++|+|++|.|+ .+|..|.+|++|+.|+|++|+|+ .+|..|+.|++|+.|+
T Consensus 223 l~~L~~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCSC-CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCCC-CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 4678999999999884 7777779999999999999999 88999999999999999999999 7899999999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc------CcccccCCcccc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLIC 131 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~------~~~~l~~N~~~c 131 (552)
|++|.|+ .+|..|..|++|+.|+|++|+|++.+|..+. ..++|++|.+..
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 9999998 7888899999999999999999998887654 236788887753
No 315
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.57 E-value=3.6e-15 Score=155.77 Aligned_cols=116 Identities=21% Similarity=0.158 Sum_probs=109.6
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 57899999999999999899999999999999999999988899999999999999999999988899999999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS 116 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 116 (552)
|++|+|++..+..+..+++|+.|+|++|++++.+|.
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 999999977677789999999999999999998884
No 316
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.57 E-value=1.8e-15 Score=143.73 Aligned_cols=129 Identities=17% Similarity=0.202 Sum_probs=107.3
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCc-cCCCCchhhcCCCCCCEEEccC-CcCCCCCCccccCCcccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNN-ISGHIPTEIGKLSKLLTLDLSN-NFFTGPIPSTVSHLETLQYL 79 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L 79 (552)
++|++|+|++|+++++.+..|+++++|++|+|++|+ +++..+..|.++++|+.|+|++ |++++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 368899999999998777789999999999999997 8866666889999999999998 99986666778899999999
Q ss_pred ccccccccCCCCcccccccccc---EEeccCC-CCCCCCCCccc-----C-cccccCCccccC
Q 008828 80 RLNNNSLTGAIPPSLSNMSQLA---FLDLSYN-NLSGPVPSFHA-----K-TFNITGNSLICA 132 (552)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~---~l~l~~N-~l~~~~~~~~~-----~-~~~l~~N~~~c~ 132 (552)
+|++|++++ +|. +..+++|+ .|++++| .+++.++..+. + .+++++|.+...
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i 171 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSV 171 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCccc
Confidence 999999985 676 78888887 9999999 88877776544 4 778888877533
No 317
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.57 E-value=2.2e-15 Score=134.87 Aligned_cols=112 Identities=26% Similarity=0.267 Sum_probs=100.7
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCC--ccccCCccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIP--STVSHLETLQY 78 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~L~~ 78 (552)
+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|+.|+|++|.+++ +| ..+..+++|+.
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKS 124 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCE
Confidence 46899999999999986 789999999999999999997789888889999999999999995 44 68999999999
Q ss_pred cccccccccCCCC---ccccccccccEEeccCCCCCCCCC
Q 008828 79 LRLNNNSLTGAIP---PSLSNMSQLAFLDLSYNNLSGPVP 115 (552)
Q Consensus 79 L~l~~N~l~~~~p---~~~~~l~~L~~l~l~~N~l~~~~~ 115 (552)
|+|++|.+++..+ ..+..+++|+.|++++|.+...+.
T Consensus 125 L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 125 LDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp EECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred EEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 9999999995554 489999999999999999986554
No 318
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.57 E-value=4.8e-15 Score=154.73 Aligned_cols=131 Identities=21% Similarity=0.174 Sum_probs=111.1
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|+++++.|..|.++++|+.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 46899999999999988999999999999999999999888889999999999999999999666667999999999999
Q ss_pred ccccccCCCCccccccccccEEeccCC-CCCCCCCCccc-----CcccccCCccccC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYN-NLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N-~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
++|+|++..+..|..+++|+.|+|++| .+...++..+. +.++|++|.+...
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 999999666678889999999999984 44444443333 6788888887654
No 319
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.57 E-value=3e-15 Score=151.00 Aligned_cols=131 Identities=20% Similarity=0.212 Sum_probs=107.0
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+..|.++++|+.|+|++|.|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 46899999999999877778999999999999999999777888999999999999999999544444888999999999
Q ss_pred ccccccCCCC-ccccccccccEEeccCC-CCCCCCCCccc-----CcccccCCccccC
Q 008828 82 NNNSLTGAIP-PSLSNMSQLAFLDLSYN-NLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p-~~~~~l~~L~~l~l~~N-~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
++|++++..+ ..+..+++|+.|++++| .++..++..+. +.+++++|.+...
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSY 189 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCcc
Confidence 9999984433 47888999999999998 46666555544 6788888877543
No 320
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.57 E-value=2.4e-15 Score=142.97 Aligned_cols=130 Identities=16% Similarity=0.157 Sum_probs=113.0
Q ss_pred CCcccEeccCCCC-CcccccccccCCCCCcEEeccc-CccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccc-
Q 008828 1 MVLLCYRGAPSQN-LSGTLSSSIGNLTNLQLVLLQN-NNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQ- 77 (552)
Q Consensus 1 l~~l~~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~- 77 (552)
+++|++|+|++|+ ++++.+..|.++++|++|+|++ |+|++..+..|.++++|+.|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 5789999999997 8887777999999999999999 99997777789999999999999999995 776 88888888
Q ss_pred --ccccccc-cccCCCCcccccccccc-EEeccCCCCCCCCCCccc----CcccccCCc-cccC
Q 008828 78 --YLRLNNN-SLTGAIPPSLSNMSQLA-FLDLSYNNLSGPVPSFHA----KTFNITGNS-LICA 132 (552)
Q Consensus 78 --~L~l~~N-~l~~~~p~~~~~l~~L~-~l~l~~N~l~~~~~~~~~----~~~~l~~N~-~~c~ 132 (552)
.|++++| ++++..+..|..+++|+ .|++++|.++..++..+. +.+++++|+ +...
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i 195 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVI 195 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccC
Confidence 9999999 99977677899999999 999999999966655443 678899995 6543
No 321
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.57 E-value=3.9e-15 Score=159.89 Aligned_cols=133 Identities=21% Similarity=0.299 Sum_probs=86.7
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCC--CchhhcCCCCCCEEEccCCcCCCCCCcc-ccCCcccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGH--IPTEIGKLSKLLTLDLSNNFFTGPIPST-VSHLETLQ 77 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~ 77 (552)
+++|++|+|++|++++..|..++++++|++|+|++|++++. +|..|.++++|+.|+|++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 46788888888888888888888888888888888888853 2456788888888888888888645543 55555555
Q ss_pred ccccccccccC---------------------CCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCcccc
Q 008828 78 YLRLNNNSLTG---------------------AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 131 (552)
Q Consensus 78 ~L~l~~N~l~~---------------------~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c 131 (552)
.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.++..+. +.+++++|++.|
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCC
Confidence 55555554443 3444444555566666666666544443222 445566666655
Q ss_pred CC
Q 008828 132 AT 133 (552)
Q Consensus 132 ~~ 133 (552)
.|
T Consensus 512 ~c 513 (562)
T 3a79_B 512 TC 513 (562)
T ss_dssp CH
T ss_pred Cc
Confidence 54
No 322
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.56 E-value=8.7e-15 Score=146.12 Aligned_cols=129 Identities=20% Similarity=0.246 Sum_probs=81.0
Q ss_pred CCcccEeccCCCCCcc--cccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccc
Q 008828 1 MVLLCYRGAPSQNLSG--TLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQY 78 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 78 (552)
+++|++|+|++|.+.. ..+..|.++++|++|++++|.++ .+|..+. ++|+.|+|++|++++..|..|..+++|+.
T Consensus 144 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 220 (330)
T 1xku_A 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAK 220 (330)
T ss_dssp CTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred CccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCE
Confidence 4677888888887753 56667777777777777777776 4554443 56666666666666555566666666666
Q ss_pred cccccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCccccC
Q 008828 79 LRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICA 132 (552)
Q Consensus 79 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c~ 132 (552)
|+|++|++++..+..+..+++|+.|+|++|+|+..+..+.. +.+++++|.+...
T Consensus 221 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp EECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred EECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCcc
Confidence 66666666655555666666666666666666643332211 4566666665443
No 323
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=2.4e-15 Score=149.35 Aligned_cols=128 Identities=19% Similarity=0.212 Sum_probs=92.3
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhc-CCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIG-KLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++|++|+|++|++++..+..++.+++|++|+|++|.+++..+..+. ++++|+.|+|++|.+++. |. ...+++|+.|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEE
Confidence 5677777777777776677777788888888888888766666653 678888888888888743 32 33477888888
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c~ 132 (552)
|++|+|++ +|..+..+++|+.|+|++|+|++.++.+.. +.+++++|++.|+
T Consensus 198 Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 198 LSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 88888884 455577788888888888888865443211 6778888888765
No 324
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.56 E-value=5.6e-15 Score=160.17 Aligned_cols=131 Identities=18% Similarity=0.089 Sum_probs=115.5
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
+++++|+|++|+++++.|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 36899999999999988999999999999999999999888999999999999999999999888889999999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCC-CCccc----CcccccCCccccC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPV-PSFHA----KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~-~~~~~----~~~~l~~N~~~c~ 132 (552)
++|++++..|..+..+++|+.|+|++|++++.. |.... +.+++++|.+...
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 168 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYL 168 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEE
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccccc
Confidence 999999766788999999999999999999853 44332 7788889887643
No 325
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.55 E-value=1.1e-14 Score=160.08 Aligned_cols=131 Identities=21% Similarity=0.177 Sum_probs=110.8
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 46889999999999887788999999999999999999888888999999999999999998554457889999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
++|++++..|..|..+++|++|+|++|.+++.+|..+. +.+++++|.+...
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 99999877778889999999999999999888776543 6778888876543
No 326
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.55 E-value=5.4e-15 Score=136.04 Aligned_cols=125 Identities=14% Similarity=0.219 Sum_probs=107.0
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|++++|.++. ++.+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 65 l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 5789999999997764 34799999999999999999987888999999999999999999977788899999999999
Q ss_pred ccccc-ccCCCCccccccccccEEeccCCCCCCCCCCc-c--cCcccccCCcc
Q 008828 81 LNNNS-LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF-H--AKTFNITGNSL 129 (552)
Q Consensus 81 l~~N~-l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~--~~~~~l~~N~~ 129 (552)
|++|+ +. .+| .+..+++|+.|++++|++++..+-. + .+.+++++|++
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC--
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCccc
Confidence 99998 66 666 6899999999999999999854211 1 17889999986
No 327
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.55 E-value=1.3e-15 Score=165.88 Aligned_cols=130 Identities=22% Similarity=0.321 Sum_probs=114.8
Q ss_pred CCcccEeccCCCCCccc-----------------cccccc--CCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCc
Q 008828 1 MVLLCYRGAPSQNLSGT-----------------LSSSIG--NLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNF 61 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 61 (552)
|++|++|+|++|++++. +|..++ ++++|++|+|++|.+.+.+|..|+++++|+.|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 57899999999999986 899988 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCccccCC------ccccccccccccccCCCCc--cccccccccEEeccCCCCCCCCCCccc-----CcccccC
Q 008828 62 -FTG-PIPSTVSHL------ETLQYLRLNNNSLTGAIPP--SLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITG 126 (552)
Q Consensus 62 -l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~ 126 (552)
++| .+|..++.+ ++|+.|+|++|+++ .+|. .+..+++|+.|+|++|+++|.+| .+. +.+++++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 887 788888776 89999999999999 8888 89999999999999999997777 333 7788888
Q ss_pred CccccC
Q 008828 127 NSLICA 132 (552)
Q Consensus 127 N~~~c~ 132 (552)
|.+...
T Consensus 363 N~l~~l 368 (636)
T 4eco_A 363 NQITEI 368 (636)
T ss_dssp SEEEEC
T ss_pred Cccccc
Confidence 887633
No 328
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.55 E-value=1.2e-14 Score=151.23 Aligned_cols=131 Identities=21% Similarity=0.147 Sum_probs=103.5
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++++.|+|++|+++++.+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 46788999999988888888899999999999999998777788888999999999999988655567888899999999
Q ss_pred ccccccCCCCccccccccccEEeccCCC-CCCCCCCccc-----CcccccCCccccC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNN-LSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~-l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
++|+|++..+..|..+++|+.|+|++|+ +...++..+. +.++|++|.+...
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 200 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI 200 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc
Confidence 9998886666678888888888888844 4433333332 6677788777644
No 329
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.55 E-value=6.1e-15 Score=150.87 Aligned_cols=132 Identities=15% Similarity=0.129 Sum_probs=117.1
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|++++|.+....+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|+.|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46899999999999887666789999999999999999977778999999999999999999988888899999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
|++|+++...+..|..+++|+.|++++|++++.++..+. +.+++++|.+...
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999955445579999999999999999998876554 7889999987643
No 330
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.54 E-value=7.4e-15 Score=158.79 Aligned_cols=132 Identities=15% Similarity=0.129 Sum_probs=119.1
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++++.|++++|.+..+.+..|..+++|++|+|++|.|++..|..|.++++|+.|+|++|.+++..|..|+++++|+.|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 36789999999999987777899999999999999999988888999999999999999999988888899999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
|++|.|++..+..|..+++|+.|+|++|.|++.+|..+. +.+++++|.+...
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 999999966666689999999999999999998887654 7889999988654
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.54 E-value=2.7e-15 Score=148.41 Aligned_cols=130 Identities=18% Similarity=0.116 Sum_probs=76.4
Q ss_pred CCcccEeccCCCCCccccc----ccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCC--C--CccccC
Q 008828 1 MVLLCYRGAPSQNLSGTLS----SSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP--I--PSTVSH 72 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~--p~~~~~ 72 (552)
+++|++|+|++|.+++..+ ..+..+++|++|+|++|+|++..|..|.++++|++|+|++|++.+. + +..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 3566777777777666433 3345666777777777777666666666777777777777766531 1 122355
Q ss_pred CccccccccccccccCCCCc----cccccccccEEeccCCCCCCCCCCcc--------cCcccccCCcccc
Q 008828 73 LETLQYLRLNNNSLTGAIPP----SLSNMSQLAFLDLSYNNLSGPVPSFH--------AKTFNITGNSLIC 131 (552)
Q Consensus 73 l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~l~l~~N~l~~~~~~~~--------~~~~~l~~N~~~c 131 (552)
+++|++|+|++|+|+ .++. .+..+++|+.|+|++|+|++..|..+ .+.++|++|.+..
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~ 265 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ 265 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc
Confidence 666666666666665 3332 23455666666666666666533221 1455666666653
No 332
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=2.6e-15 Score=135.53 Aligned_cols=125 Identities=18% Similarity=0.148 Sum_probs=101.3
Q ss_pred CCcccEeccCCCCCcccccccccCCC-CCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLT-NLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 79 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 79 (552)
+++|+.|+|++|+++.. |. +..+. +|++|+|++|.|++. ..|.++++|++|+|++|+|++..+..+..+++|+.|
T Consensus 18 ~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 36799999999999864 54 55554 999999999999964 579999999999999999995444445899999999
Q ss_pred ccccccccCCCCc--cccccccccEEeccCCCCCCCCCC---ccc-----CcccccCCccc
Q 008828 80 RLNNNSLTGAIPP--SLSNMSQLAFLDLSYNNLSGPVPS---FHA-----KTFNITGNSLI 130 (552)
Q Consensus 80 ~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~~~---~~~-----~~~~l~~N~~~ 130 (552)
+|++|+|. .+|. .+..+++|+.|++++|+++..++. .+. +.+++++|...
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999997 6666 789999999999999999865442 121 66777777653
No 333
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.54 E-value=3.4e-15 Score=147.92 Aligned_cols=129 Identities=22% Similarity=0.187 Sum_probs=80.4
Q ss_pred CCcccEeccCCCCCcccccccccCC-----CCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCC--CCccc--c
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNL-----TNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP--IPSTV--S 71 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~--~ 71 (552)
+++|++|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|.++++|+.|+|++|++.+. .|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 35677777777777765 6666655 6777777777777766666777777777777777776543 22233 6
Q ss_pred CCccccccccccccccCC--CC-ccccccccccEEeccCCCCCCCCC-Ccc-----cCcccccCCccc
Q 008828 72 HLETLQYLRLNNNSLTGA--IP-PSLSNMSQLAFLDLSYNNLSGPVP-SFH-----AKTFNITGNSLI 130 (552)
Q Consensus 72 ~l~~L~~L~l~~N~l~~~--~p-~~~~~l~~L~~l~l~~N~l~~~~~-~~~-----~~~~~l~~N~~~ 130 (552)
.+++|+.|+|++|+|++. ++ ..+..+++|+.|+|++|+|++.+| ..+ .+.++|++|.+.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 667777777777776621 11 223455667777777777766553 111 156666676665
No 334
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.54 E-value=5.3e-15 Score=149.17 Aligned_cols=121 Identities=21% Similarity=0.213 Sum_probs=77.8
Q ss_pred cEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccc
Q 008828 5 CYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNN 84 (552)
Q Consensus 5 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 84 (552)
...++++|+++. +|..+. ++|++|+|++|.|++..+..|.++++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 34 ~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (353)
T 2z80_A 34 GICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYN 110 (353)
T ss_dssp SEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred eEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCC
Confidence 345666676665 454442 46777777777777555556777777777777777777655666777777777777777
Q ss_pred cccCCCCccccccccccEEeccCCCCCCCCC-Cccc-----CcccccCCc
Q 008828 85 SLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP-SFHA-----KTFNITGNS 128 (552)
Q Consensus 85 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~-----~~~~l~~N~ 128 (552)
+|++..+..+..+++|+.|+|++|++++.++ ..+. +.+++++|.
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 111 YLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp CCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred cCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc
Confidence 7774434446677777777777777775544 2222 556666663
No 335
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=1.7e-14 Score=129.28 Aligned_cols=105 Identities=25% Similarity=0.255 Sum_probs=94.2
Q ss_pred CCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccccccCCCCccccccccccEEecc
Q 008828 27 NLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLS 106 (552)
Q Consensus 27 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 106 (552)
..+.|++++|.|+ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4689999999999 6887664 899999999999998888899999999999999999997777778999999999999
Q ss_pred CCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 107 YNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 107 ~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
+|+|++.++..+. +.++|++|++.|.+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999998887554 789999999999874
No 336
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.54 E-value=8.8e-16 Score=152.15 Aligned_cols=131 Identities=18% Similarity=0.212 Sum_probs=106.2
Q ss_pred CCcccEeccCCCCCcccccccc--cCCCCCcEEecccCccCCCCchhhcCC-----CCCCEEEccCCcCCCCCCccccCC
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSI--GNLTNLQLVLLQNNNISGHIPTEIGKL-----SKLLTLDLSNNFFTGPIPSTVSHL 73 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~--~~l~~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l 73 (552)
+++|++|+|++|++++.+|..+ +.+++|++|+|++|++++. |..+.++ ++|++|+|++|++++..|..|+.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4688999999999998888876 8899999999999999966 8878777 899999999999997777889999
Q ss_pred ccccccccccccccCC--CCccc--cccccccEEeccCCCCCCCC--C-Cc-----ccCcccccCCccccC
Q 008828 74 ETLQYLRLNNNSLTGA--IPPSL--SNMSQLAFLDLSYNNLSGPV--P-SF-----HAKTFNITGNSLICA 132 (552)
Q Consensus 74 ~~L~~L~l~~N~l~~~--~p~~~--~~l~~L~~l~l~~N~l~~~~--~-~~-----~~~~~~l~~N~~~c~ 132 (552)
++|+.|+|++|++.+. +|..+ ..+++|+.|+|++|+|++.+ + .. ..+.+++++|.+...
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 243 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDA 243 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSS
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcc
Confidence 9999999999998754 23334 78899999999999998432 1 21 237889999987653
No 337
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=8.9e-15 Score=156.25 Aligned_cols=109 Identities=24% Similarity=0.260 Sum_probs=99.2
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|.|+ .+|..|+++++|+.|+|++|+|++ +| .++.|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 57899999999988 565 999999999999999999 889999999999999999999995 67 89999999999999
Q ss_pred cccccCCC-CccccccccccEEeccCCCCCCCCCC
Q 008828 83 NNSLTGAI-PPSLSNMSQLAFLDLSYNNLSGPVPS 116 (552)
Q Consensus 83 ~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~~~ 116 (552)
+|+|++.. |..+..+++|+.|+|++|+|++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999776 89999999999999999999987764
No 338
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.53 E-value=3e-14 Score=142.37 Aligned_cols=127 Identities=20% Similarity=0.257 Sum_probs=96.5
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 46788888888888777778888888888888888888777788888888888888888888 5666554 68888888
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCC--CCCCccc----CcccccCCcccc
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG--PVPSFHA----KTFNITGNSLIC 131 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~~~~~~----~~~~l~~N~~~c 131 (552)
++|++.+..+..|..+++|+.|++++|.++. ..+..+. +.+++++|.+..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 186 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc
Confidence 8888886656668888888888888888853 4444332 567777777654
No 339
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.53 E-value=2.2e-14 Score=156.09 Aligned_cols=103 Identities=21% Similarity=0.297 Sum_probs=56.3
Q ss_pred CCcEEecccCccCCCCchhhc--CCCCCCEEEccCCcCCCCCCccccCCcccccccc------ccccccCCCCccccccc
Q 008828 27 NLQLVLLQNNNISGHIPTEIG--KLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL------NNNSLTGAIPPSLSNMS 98 (552)
Q Consensus 27 ~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l------~~N~l~~~~p~~~~~l~ 98 (552)
+|+.|+|++|+|+ .+|..+. ++++|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..++
T Consensus 489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 5555555555555 4555554 55566666666666554 5555555556666655 34455555555555556
Q ss_pred cccEEeccCCCCCCCCCCccc---CcccccCCccccC
Q 008828 99 QLAFLDLSYNNLSGPVPSFHA---KTFNITGNSLICA 132 (552)
Q Consensus 99 ~L~~l~l~~N~l~~~~~~~~~---~~~~l~~N~~~c~ 132 (552)
+|+.|+|++|+|+. +|..+. +.+++++|++.|.
T Consensus 567 ~L~~L~Ls~N~l~~-ip~~~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 567 SLTQLQIGSNDIRK-VNEKITPNISVLDIKDNPNISI 602 (636)
T ss_dssp SCCEEECCSSCCCB-CCSCCCTTCCEEECCSCTTCEE
T ss_pred CCCEEECCCCcCCc-cCHhHhCcCCEEECcCCCCccc
Confidence 66666666666632 332221 4555566655543
No 340
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.52 E-value=3.3e-14 Score=139.24 Aligned_cols=121 Identities=26% Similarity=0.373 Sum_probs=66.8
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+ +.++++|++|+|++|.+++ +| .+.++++|+.|+|++|++++ + ..+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 455666666666555333 5566666666666666653 22 25556666666666666653 2 34555666666666
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCcccc
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLIC 131 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c 131 (552)
++|++++. ..+..+++|+.|+|++|++++.++ +.. +.+++++|.+..
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCC
Confidence 66666533 345556666666666666665443 111 455566665543
No 341
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.52 E-value=8.6e-15 Score=156.71 Aligned_cols=129 Identities=20% Similarity=0.194 Sum_probs=98.5
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 46888888888888877788888888888888888888777778888888888888888888666666888888888888
Q ss_pred ccccccCC-CCccccccccccEEeccCCCCCC-CCCCccc-----CcccccCCccc
Q 008828 82 NNNSLTGA-IPPSLSNMSQLAFLDLSYNNLSG-PVPSFHA-----KTFNITGNSLI 130 (552)
Q Consensus 82 ~~N~l~~~-~p~~~~~l~~L~~l~l~~N~l~~-~~~~~~~-----~~~~l~~N~~~ 130 (552)
++|++++. .|..+..+++|+.|++++|.+.+ .++..+. +.+++++|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 88888753 46678888888888888887433 3333333 56677777664
No 342
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.52 E-value=7.3e-15 Score=128.63 Aligned_cols=105 Identities=24% Similarity=0.265 Sum_probs=94.6
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCC-CCccccCCcccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP-IPSTVSHLETLQYL 79 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L 79 (552)
+++|++|+|++|++++. ..++++++|++|+|++|.+++.+|..+.++++|+.|+|++|.+++. .+..+..+++|+.|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 57899999999999986 7899999999999999999977999888999999999999999953 33789999999999
Q ss_pred ccccccccCCCC---ccccccccccEEeccC
Q 008828 80 RLNNNSLTGAIP---PSLSNMSQLAFLDLSY 107 (552)
Q Consensus 80 ~l~~N~l~~~~p---~~~~~l~~L~~l~l~~ 107 (552)
++++|++++..+ ..+..+++|+.|++++
T Consensus 119 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 119 DLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred eCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999996655 5799999999999874
No 343
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.52 E-value=1.6e-14 Score=162.57 Aligned_cols=129 Identities=23% Similarity=0.176 Sum_probs=84.3
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCC-chhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHI-PTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|.++++|+.|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 46777777777777766677777777777777777444344 56677777777777777777766666677777777777
Q ss_pred cccccccCCCCcc--ccccccccEEeccCCCCCCCCCC-ccc-----CcccccCCccc
Q 008828 81 LNNNSLTGAIPPS--LSNMSQLAFLDLSYNNLSGPVPS-FHA-----KTFNITGNSLI 130 (552)
Q Consensus 81 l~~N~l~~~~p~~--~~~l~~L~~l~l~~N~l~~~~~~-~~~-----~~~~l~~N~~~ 130 (552)
|++|.+++.+|.. +..+++|+.|+|++|.+++..+. .+. +.++|++|.+.
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 7777776555443 66677777777777777665432 222 55566666553
No 344
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.52 E-value=2.4e-14 Score=153.85 Aligned_cols=131 Identities=19% Similarity=0.148 Sum_probs=100.1
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 35788888888888877778888888888888888888766777888888888888888888666677888888888888
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCC-CCCccc-----CcccccCCccccC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP-VPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~~~~~~-----~~~~l~~N~~~c~ 132 (552)
++|++++..+..+..+++|++|++++|.+++. .|..+. +.+++++|.+...
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 88888855555678888888888888888763 354433 6677777776543
No 345
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.52 E-value=1.7e-14 Score=153.37 Aligned_cols=127 Identities=19% Similarity=0.203 Sum_probs=74.0
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCC--CCCccccCCccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTG--PIPSTVSHLETLQYLR 80 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ 80 (552)
+|+.|++++|++.... .+..+++|++|+|++|++++.+|..+.++++|+.|+|++|++++ .+|..+..+++|+.|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 4666666666654422 12456666666666666665566666666666666666666664 2344566666666666
Q ss_pred cccccccCCCCc-cccccccccEEeccCCCCCCCCCCcc---cCcccccCCcccc
Q 008828 81 LNNNSLTGAIPP-SLSNMSQLAFLDLSYNNLSGPVPSFH---AKTFNITGNSLIC 131 (552)
Q Consensus 81 l~~N~l~~~~p~-~~~~l~~L~~l~l~~N~l~~~~~~~~---~~~~~l~~N~~~c 131 (552)
|++|++++.+|. .+..+++|+.|+|++|++++..|..+ .+.+++++|.+..
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ 435 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKS 435 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCcccc
Confidence 666666653443 35556666666666666655444332 2556666666553
No 346
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.51 E-value=2.6e-14 Score=137.70 Aligned_cols=122 Identities=24% Similarity=0.346 Sum_probs=85.6
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
|++|++|++++|+++. +| .++.+++|+.|+|++|+|++ ++. +.++++|+.|+|++|++++ +|.. .. ++|+.|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEE
Confidence 3578888888888776 44 67788888888888888884 444 7888888888888888874 4432 22 7777777
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCcc----cCcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH----AKTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~----~~~~~l~~N~~~c~ 132 (552)
|++|+|++ ++ .+..+++|+.|+|++|+|++.+ .+. .+.+++++|.+...
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCCBC
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCcch
Confidence 77777774 33 4777777777777777777653 221 15667777776554
No 347
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=3.9e-14 Score=127.39 Aligned_cols=104 Identities=29% Similarity=0.314 Sum_probs=92.6
Q ss_pred CcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccccccCCCCccccccccccEEeccC
Q 008828 28 LQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 107 (552)
Q Consensus 28 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 107 (552)
-+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999998 7887765 8999999999999988888999999999999999999976666789999999999999
Q ss_pred CCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 108 NNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 108 N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
|+|++.++..+. +.++|++|++.|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 999988876544 788999999998764
No 348
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.51 E-value=3.8e-14 Score=141.44 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=114.1
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCC--CCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISG--HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 79 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 79 (552)
++|++|++++|.+++..+..|.++++|+.|+|++|.++. ..+..|.++++|+.|++++|.++ .+|..+. ++|+.|
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L 197 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTEL 197 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEE
Confidence 579999999999999888889999999999999999963 67888999999999999999999 5776654 799999
Q ss_pred ccccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccCCC
Q 008828 80 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 134 (552)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~~~ 134 (552)
+|++|++++..|..+..+++|+.|+|++|.+++.++..+. +.+++++|.+...+.
T Consensus 198 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~ 257 (330)
T 1xku_A 198 HLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG 257 (330)
T ss_dssp ECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCT
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCCh
Confidence 9999999988888999999999999999999987775543 788999999875543
No 349
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.51 E-value=1.7e-14 Score=142.71 Aligned_cols=131 Identities=20% Similarity=0.175 Sum_probs=107.6
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCC--C--chhhcCCCCCCEEEccCCcCCCCCCc----cccC
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGH--I--PTEIGKLSKLLTLDLSNNFFTGPIPS----TVSH 72 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~----~~~~ 72 (552)
+++|++|+|++|++.+..|..|+.+++|++|+|++|++.+. + +..+.++++|++|+|++|+++ .++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 46899999999999998889999999999999999998642 2 223468999999999999997 4444 2567
Q ss_pred CccccccccccccccCCCCcccccc---ccccEEeccCCCCCCCCCCccc--CcccccCCccccC
Q 008828 73 LETLQYLRLNNNSLTGAIPPSLSNM---SQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLICA 132 (552)
Q Consensus 73 l~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~l~l~~N~l~~~~~~~~~--~~~~l~~N~~~c~ 132 (552)
+++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|+..+..... +.++|++|.+...
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSSNRLNRA 287 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCCSCCSCEECCSCCCCSC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhcCCCCEEECCCCcCCCC
Confidence 8999999999999998778777777 6999999999999965444432 7889999988754
No 350
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.51 E-value=1.6e-14 Score=154.62 Aligned_cols=129 Identities=19% Similarity=0.172 Sum_probs=112.2
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCC-CCCccccCCcccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTG-PIPSTVSHLETLQYL 79 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L 79 (552)
|++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++ ..|..++++++|+.|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 5789999999999999888999999999999999999998777789999999999999999986 356789999999999
Q ss_pred ccccccccCCCC-ccccccccccEEeccCCCCCCCCCCccc-----CcccccCCcc
Q 008828 80 RLNNNSLTGAIP-PSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSL 129 (552)
Q Consensus 80 ~l~~N~l~~~~p-~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~ 129 (552)
++++|++.+.+| ..+..+++|+.|++++|.+++..|..+. +.+++++|.+
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 999999544554 6899999999999999999987776554 4556666654
No 351
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.51 E-value=5.7e-14 Score=140.34 Aligned_cols=124 Identities=23% Similarity=0.259 Sum_probs=57.5
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccC--CCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNIS--GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+|++|++++|++.+..+..|.++++|+.|+|++|.++ +..|..|..+ +|+.|++++|+++ .+|..+. ++|+.|+
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP--ETLNELH 199 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC--SSCSCCB
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc--CCCCEEE
Confidence 3444444444444444444555555555555555553 1333334333 3333333333222 1222111 3455555
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 130 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~ 130 (552)
|++|++++..+..+..+++|+.|+|++|++++.++..+. +.+++++|.+.
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 555555544445555555555555555555555443322 44555555554
No 352
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=7.2e-15 Score=163.55 Aligned_cols=128 Identities=20% Similarity=0.270 Sum_probs=104.2
Q ss_pred CCcccEeccCCCCCcc-----------------ccccccc--CCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCc
Q 008828 1 MVLLCYRGAPSQNLSG-----------------TLSSSIG--NLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNF 61 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~-----------------~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 61 (552)
|++|++|+|++|++++ .+|..++ ++++|++|+|++|.+.+.+|..|.++++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 5788899999999888 3788877 89999999999998888889889999999999999997
Q ss_pred -CCC-CCCccccCCc-------cccccccccccccCCCCc--cccccccccEEeccCCCCCCCCCCccc----CcccccC
Q 008828 62 -FTG-PIPSTVSHLE-------TLQYLRLNNNSLTGAIPP--SLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITG 126 (552)
Q Consensus 62 -l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~ 126 (552)
+++ .+|..++.++ +|+.|+|++|+|+ .+|. .+..+++|+.|+|++|+|+ .+|.+.. +.++|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 887 6777666555 8888888888888 7787 7888888888888888888 4553221 6778888
Q ss_pred Cccc
Q 008828 127 NSLI 130 (552)
Q Consensus 127 N~~~ 130 (552)
|.+.
T Consensus 605 N~l~ 608 (876)
T 4ecn_A 605 NQIE 608 (876)
T ss_dssp SCCS
T ss_pred Cccc
Confidence 8776
No 353
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.50 E-value=8.6e-15 Score=154.01 Aligned_cols=129 Identities=22% Similarity=0.213 Sum_probs=88.0
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCc-------------
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS------------- 68 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~------------- 68 (552)
++|++|+|++|++++..|..|+.+++|++|+|++|.|++..| |.++++|+.|+|++|.|++..+.
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l 111 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcC
Confidence 478999999999998888889999999999999999986555 77888887777777766532110
Q ss_pred ---cccCCccccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc------CcccccCCccccC
Q 008828 69 ---TVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLICA 132 (552)
Q Consensus 69 ---~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~------~~~~l~~N~~~c~ 132 (552)
....+++|+.|+|++|.|++..|..+..+++|+.|+|++|.|++.+|..+. +.++|++|.+...
T Consensus 112 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp CCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 011245566666666666666666666666777777777777665444321 4556666665433
No 354
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.49 E-value=3e-14 Score=143.28 Aligned_cols=127 Identities=18% Similarity=0.144 Sum_probs=103.9
Q ss_pred cEeccCCC-CCcccccccccCCCCCcEEeccc-CccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 5 CYRGAPSQ-NLSGTLSSSIGNLTNLQLVLLQN-NNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 5 ~~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
..++++++ +|++ +|. |..+++|+.|+|++ |.|++..+..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788888 7876 777 99999999999996 99998877899999999999999999998888899999999999999
Q ss_pred cccccCCCCccccccccccEEeccCCCCCCCCCCc-cc-----CcccccCCccccCCC
Q 008828 83 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF-HA-----KTFNITGNSLICATG 134 (552)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~~-----~~~~l~~N~~~c~~~ 134 (552)
+|+|++..+..+..++ |+.|+|++|+|.....-. +. ....+..+.+.|..+
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 9999966666666665 999999999999765421 11 233344566667644
No 355
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.49 E-value=3.3e-14 Score=140.43 Aligned_cols=125 Identities=23% Similarity=0.339 Sum_probs=95.2
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|.+++. + .+..+++|++|+|++|++++ ++. +.++++|+.|+|++|.+++. +. +..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 157 (308)
T 1h6u_A 84 LTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLS 157 (308)
T ss_dssp CCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEE
T ss_pred CCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEE
Confidence 56788899999888774 3 68888888888888888884 443 88888888888888888843 33 77888888888
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCc---ccCcccccCCccccCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLICAT 133 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~---~~~~~~l~~N~~~c~~ 133 (552)
|++|++++ ++. +..+++|+.|+|++|++++.++-. ..+.+++++|.+....
T Consensus 158 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 158 IGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCG
T ss_pred ccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCccc
Confidence 88888884 443 788888888888888888765411 1167788888776554
No 356
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.49 E-value=5.2e-14 Score=151.11 Aligned_cols=130 Identities=16% Similarity=0.186 Sum_probs=110.2
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCC--CCccccCCcccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP--IPSTVSHLETLQYL 79 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L 79 (552)
.+|++|++++|.+.... ..+.+++|++|+|++|++++.+|..+.++++|+.|+|++|++++. +|..+..+++|+.|
T Consensus 331 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L 408 (562)
T 3a79_B 331 MNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETL 408 (562)
T ss_dssp CCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEE
T ss_pred CcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEE
Confidence 36999999999986532 237899999999999999988999999999999999999999953 24678999999999
Q ss_pred ccccccccCCCCc-cccccccccEEeccCCCCCCCCCCcc---cCcccccCCccccCC
Q 008828 80 RLNNNSLTGAIPP-SLSNMSQLAFLDLSYNNLSGPVPSFH---AKTFNITGNSLICAT 133 (552)
Q Consensus 80 ~l~~N~l~~~~p~-~~~~l~~L~~l~l~~N~l~~~~~~~~---~~~~~l~~N~~~c~~ 133 (552)
+|++|++++.+|. .+..+++|+.|+|++|++++..|..+ .+.++|++|.+...+
T Consensus 409 ~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip 466 (562)
T 3a79_B 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIP 466 (562)
T ss_dssp ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCC
T ss_pred ECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccC
Confidence 9999999975664 58889999999999999987766554 378899999887544
No 357
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.49 E-value=8.3e-14 Score=137.54 Aligned_cols=104 Identities=23% Similarity=0.396 Sum_probs=53.8
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
+|++|++++|++.. +| .+..+++|+.|+|++|.+++ ++. +.++++|+.|+|++|++++ ++ .+..+++|+.|+|+
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECC
Confidence 45555555555554 22 35555555555555555552 332 5555555555555555552 22 35555555555555
Q ss_pred cccccCCCCccccccccccEEeccCCCCCCCC
Q 008828 83 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPV 114 (552)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 114 (552)
+|++++ ++. +..+++|+.|+|++|.+++.+
T Consensus 116 ~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~ 145 (308)
T 1h6u_A 116 STQITD-VTP-LAGLSNLQVLYLDLNQITNIS 145 (308)
T ss_dssp TSCCCC-CGG-GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCCCC-chh-hcCCCCCCEEECCCCccCcCc
Confidence 555553 222 555555555555555555433
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.48 E-value=5.8e-14 Score=137.49 Aligned_cols=123 Identities=25% Similarity=0.345 Sum_probs=106.0
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
|++|++|+|++|.+++. | .+..+++|++|+|++|+|++ + ..+.++++|+.|+|++|++++. ..+..+++|+.|+
T Consensus 89 l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 162 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKDL-S-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 162 (291)
T ss_dssp CTTCCEEECCSSCCCCG-G-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEECCCCcCCCC-h-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEE
Confidence 57899999999999873 3 49999999999999999995 4 4699999999999999999954 6799999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c~ 132 (552)
|++|+|++..| +..+++|+.|+|++|+|++.+ .+.. +.+++++|++.+.
T Consensus 163 L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 163 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEEEEEECC
T ss_pred ccCCccccchh--hcCCCccCEEECCCCcCCCCh-hhccCCCCCEEECcCCcccCC
Confidence 99999996544 999999999999999999753 3221 7889999988653
No 359
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=1e-13 Score=154.34 Aligned_cols=124 Identities=19% Similarity=0.207 Sum_probs=70.9
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCC--------CCCCEEEccCCcCCCCCCcccc--C
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKL--------SKLLTLDLSNNFFTGPIPSTVS--H 72 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l--------~~L~~L~l~~N~l~~~~p~~~~--~ 72 (552)
+|+.|+|++|+++.+.+..+..+++|+.|+|++|+|+ .+|..+... ++|+.|+|++|+|+ .+|..+. .
T Consensus 674 ~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 674 NASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp CEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred CcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 5666666666666432233345666666666666666 444433322 25666666666666 5555554 5
Q ss_pred CccccccccccccccCCCCccccccccccEEeccC------CCCCCCCCCccc-----CcccccCCcc
Q 008828 73 LETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY------NNLSGPVPSFHA-----KTFNITGNSL 129 (552)
Q Consensus 73 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~------N~l~~~~~~~~~-----~~~~l~~N~~ 129 (552)
+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..+. +.++|++|.+
T Consensus 752 l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 6666666666666664 555566666666666644 555555554432 4556666655
No 360
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=3.1e-14 Score=128.45 Aligned_cols=106 Identities=21% Similarity=0.206 Sum_probs=95.3
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCc--cccCCcccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS--TVSHLETLQYL 79 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L 79 (552)
++|++|+|++|++++. ..|+.+++|++|+|++|+|++..+..|.++++|+.|+|++|+++ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999986 68999999999999999999665566699999999999999997 6776 78999999999
Q ss_pred ccccccccCCCCcc----ccccccccEEeccCCCCC
Q 008828 80 RLNNNSLTGAIPPS----LSNMSQLAFLDLSYNNLS 111 (552)
Q Consensus 80 ~l~~N~l~~~~p~~----~~~l~~L~~l~l~~N~l~ 111 (552)
++++|.+. .+|.. +..+++|+.||+++|.+.
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999999 56664 899999999999999875
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.46 E-value=1.3e-13 Score=132.91 Aligned_cols=123 Identities=24% Similarity=0.307 Sum_probs=97.2
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|++++..+ +.++++|++|+|++|+|++ +|. +.. ++|+.|+|++|++++ ++ .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 4688999999999888554 8899999999999999984 554 333 889999999999984 43 588899999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCccccCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICAT 133 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c~~ 133 (552)
|++|+|++ ++ .+..+++|+.|+|++|++++. +.+.. +.+++++|++.+.+
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCCc
Confidence 99999985 44 688889999999999999876 22211 67888888887653
No 362
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.46 E-value=6.8e-14 Score=154.07 Aligned_cols=124 Identities=23% Similarity=0.244 Sum_probs=95.8
Q ss_pred ccEeccCCCCCcc---------cccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCc
Q 008828 4 LCYRGAPSQNLSG---------TLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLE 74 (552)
Q Consensus 4 l~~L~l~~n~l~~---------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 74 (552)
|..|+|+.|.|.+ ..|..|..+++|+.|+|++|.|. .+|..+.++++|+.|+|++|.|+ .+|..|++|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 3455555555544 34778999999999999999999 78888889999999999999999 8999999999
Q ss_pred cccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCcccc
Q 008828 75 TLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 131 (552)
Q Consensus 75 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c 131 (552)
+|+.|+|++|+|+ .+|..|..|++|+.|+|++|.|+.++.. +. +.++|++|++..
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWE-FGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSS-TTSCTTCCCEECTTSCCCS
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChh-hhcCCCccEEeCCCCccCC
Confidence 9999999999999 8899999999999999999999865544 33 788999999864
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.46 E-value=1.5e-13 Score=147.60 Aligned_cols=123 Identities=27% Similarity=0.354 Sum_probs=76.2
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
|++|+.|+|++|++.+..| +..|++|+.|+|++|.|++ +| .+.++++|+.|+|++|+|++ + ..+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 4566677777776666443 6666677777777776663 33 46666677777777776663 2 3466666677777
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCc---ccCcccccCCcccc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLIC 131 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~---~~~~~~l~~N~~~c 131 (552)
|++|+|++. ..+..|++|+.|+|++|.|++.+|-. ..+.++|++|.+..
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC
Confidence 777766643 45666667777777777776655411 01556666666543
No 364
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.45 E-value=1.2e-13 Score=138.84 Aligned_cols=124 Identities=25% Similarity=0.354 Sum_probs=77.1
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|++++|.+.+..+ +..+++|+.|+|++|.+++ ++. +.++++|+.|+|++|.+++ + ..+..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLN 271 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEE
T ss_pred CCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEE
Confidence 3566677777776665443 6666777777777777763 333 6666777777777776663 2 3466666777777
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
+++|++++. ..+..+++|+.|++++|++++..+..+. +.+++++|++...
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 777766643 3466666677777777766655544322 5566666666544
No 365
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.45 E-value=1.8e-14 Score=142.95 Aligned_cols=129 Identities=22% Similarity=0.213 Sum_probs=93.0
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCc-------------
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS------------- 68 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~------------- 68 (552)
++|++|+|++|++++..|..|.++++|++|+|++|.+++..+ |.++++|++|+|++|++++..+.
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l 111 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCcc
Confidence 578899999999998888889999999999999999885544 88888888888888877632100
Q ss_pred ---cccCCccccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc------CcccccCCccccC
Q 008828 69 ---TVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLICA 132 (552)
Q Consensus 69 ---~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~------~~~~l~~N~~~c~ 132 (552)
....+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++..+..+. +.++|++|.+...
T Consensus 112 ~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 184 (317)
T 3o53_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (317)
T ss_dssp SEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc
Confidence 012245677777777777766666777777888888888887765544321 5667777776544
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.43 E-value=2.4e-13 Score=146.07 Aligned_cols=123 Identities=26% Similarity=0.357 Sum_probs=106.5
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
|++|+.|+|++|.+.+ +| .+..|++|+.|+|++|.|++ ++ .+.+|++|+.|+|++|+|++. ..+..|++|+.|+
T Consensus 86 l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp CTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 5789999999999987 33 79999999999999999995 44 599999999999999999954 6799999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCcc----cCcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH----AKTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~----~~~~~l~~N~~~c~ 132 (552)
|++|+|++..| +..+++|+.|+|++|+|++. +.+. .+.++|++|++...
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECC
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCC
Confidence 99999996655 89999999999999999975 3322 27889999988654
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.42 E-value=1.5e-15 Score=139.99 Aligned_cols=127 Identities=20% Similarity=0.278 Sum_probs=110.5
Q ss_pred CcccEeccCCCCCcccccc------cccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcc
Q 008828 2 VLLCYRGAPSQNLSGTLSS------SIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLET 75 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 75 (552)
.+++.++++.+.+.+..|. .|+.+++|++|+|++|.|++ +| .+.++++|+.|+|++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 5688889999999988777 89999999999999999995 77 8999999999999999999 78888888899
Q ss_pred ccccccccccccCCCCccccccccccEEeccCCCCCCCCC-Ccc-----cCcccccCCccccCC
Q 008828 76 LQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP-SFH-----AKTFNITGNSLICAT 133 (552)
Q Consensus 76 L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~-----~~~~~l~~N~~~c~~ 133 (552)
|+.|+|++|+|++ +| .+..+++|+.|+|++|++++.++ ..+ .+.+++++|++.|.+
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 9999999999995 55 68899999999999999997443 111 278899999987653
No 368
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=2e-13 Score=137.25 Aligned_cols=104 Identities=17% Similarity=0.227 Sum_probs=94.7
Q ss_pred cEEecccC-ccCCCCchhhcCCCCCCEEEccC-CcCCCCCCccccCCccccccccccccccCCCCccccccccccEEecc
Q 008828 29 QLVLLQNN-NISGHIPTEIGKLSKLLTLDLSN-NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLS 106 (552)
Q Consensus 29 ~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 106 (552)
..+++++| .|+ .+|. |..+++|+.|+|++ |+|++..+..|.+|++|+.|+|++|+|++..|..|..|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45799998 998 6888 99999999999996 99997777889999999999999999999889999999999999999
Q ss_pred CCCCCCCCCCccc----CcccccCCccccCCC
Q 008828 107 YNNLSGPVPSFHA----KTFNITGNSLICATG 134 (552)
Q Consensus 107 ~N~l~~~~~~~~~----~~~~l~~N~~~c~~~ 134 (552)
+|+|++.++..+. +.++|.+|++.|.|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999998877654 788999999999986
No 369
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.39 E-value=6.1e-13 Score=139.29 Aligned_cols=122 Identities=25% Similarity=0.318 Sum_probs=75.8
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|++++|.+.+..+ +..+++|+.|+|++|.+++. +. +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 4567777777777776544 66777777777777777643 33 6667777777777777764332 56666677777
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCcc----cCcccccCCcccc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH----AKTFNITGNSLIC 131 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~----~~~~~l~~N~~~c 131 (552)
|++|++++..| +..+++|+.|++++|++++. +.+. .+.+++++|.+..
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCB
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCc
Confidence 77776665443 55666666666666666654 2111 1455666665543
No 370
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.37 E-value=1.5e-12 Score=138.49 Aligned_cols=114 Identities=23% Similarity=0.288 Sum_probs=72.0
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|++|+|++|+|+. +| +.+++|+.|+|++|+|++ +|. |.+ +|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 457777777777764 55 446777777777777774 555 544 77777777777774 554 4566777777
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc--CcccccCCccccC
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLICA 132 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~--~~~~l~~N~~~c~ 132 (552)
++|+|++ +|. .+++|+.|+|++|+|++.++ +.. +.++|++|.+...
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~~~L~~L~Ls~N~L~~l 195 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LPESLEALDVSTNLLESL 195 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CCTTCCEEECCSSCCSSC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hhCCCCEEECcCCCCCch
Confidence 7777764 454 45666677777777666333 211 5566666666543
No 371
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.36 E-value=9.8e-13 Score=132.07 Aligned_cols=122 Identities=19% Similarity=0.354 Sum_probs=89.6
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++ ++. +..+++|+.|+
T Consensus 176 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 249 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLE 249 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEE
Confidence 4678888888888876443 7788888888888888874433 7788888888888888884 343 77888888888
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCcc----cCcccccCCcccc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH----AKTFNITGNSLIC 131 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~----~~~~~l~~N~~~c 131 (552)
+++|.+++ + +.+..+++|+.|++++|++++. +.+. .+.+++++|.+..
T Consensus 250 l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 250 IGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCG
T ss_pred CCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCC
Confidence 88888874 3 4577788888888888888865 3221 1677888887653
No 372
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.36 E-value=1.5e-12 Score=136.29 Aligned_cols=124 Identities=29% Similarity=0.382 Sum_probs=100.2
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|+.|++++|++++. +.+..+++|+.|++++|.+++..| +.++++|+.|+|++|.+++. +. +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 46889999999998874 468889999999999999985544 88899999999999999854 33 88889999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCcc---cCcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH---AKTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~---~~~~~l~~N~~~c~ 132 (552)
|++|++++..| +..+++|+.|+|++|++++.+|-.. .+.+++++|.+...
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 99999986443 7888999999999999988766221 17788888887665
No 373
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.34 E-value=3.2e-12 Score=133.21 Aligned_cols=118 Identities=23% Similarity=0.319 Sum_probs=95.4
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
|++|++|+|++|++++. | .++.+++|++|+|++|.|++ +| ++++++|++|+|++|++++ +| ++.+++|+.|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEE
Confidence 46789999999999874 5 68899999999999999985 45 8889999999999999985 44 88899999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc--CcccccCCcc
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSL 129 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~--~~~~l~~N~~ 129 (552)
|++|++++ +| +..+++|+.|++++|+|++..-.... +.+++++|..
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~ 160 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKK 160 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCc
Confidence 99999985 44 88889999999999999885322111 5677777743
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.33 E-value=1.9e-12 Score=138.26 Aligned_cols=102 Identities=18% Similarity=0.227 Sum_probs=90.9
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCC-CccccCCcccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPI-PSTVSHLETLQYL 79 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L 79 (552)
|++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.. |..|+.|++|+.|
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 578999999999999 588999999999999999999995 77 8999999999999999999776 9999999999999
Q ss_pred ccccccccCCCCcc---ccccccccEEec
Q 008828 80 RLNNNSLTGAIPPS---LSNMSQLAFLDL 105 (552)
Q Consensus 80 ~l~~N~l~~~~p~~---~~~l~~L~~l~l 105 (552)
+|++|+|++..|.. +..+++|+.|++
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999999665532 344789999875
No 375
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.33 E-value=2.7e-12 Score=136.56 Aligned_cols=117 Identities=26% Similarity=0.291 Sum_probs=89.1
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|+|++ +|. |.+ +|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 166 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLS 166 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEE
Confidence 4678999999999888 666 655 89999999999885 665 67888888888888884 665 567888888
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc---------CcccccCCccccCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA---------KTFNITGNSLICATG 134 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~---------~~~~l~~N~~~c~~~ 134 (552)
|++|+|++ +|. |. ++|+.|+|++|+|+..++ +.. +.++|++|.+...+.
T Consensus 167 Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~~L~~~~~~L~~L~Ls~N~l~~lp~ 224 (571)
T 3cvr_A 167 VRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPVRNHHSEETEIFFRCRENRITHIPE 224 (571)
T ss_dssp CCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC--------CCEEEECCSSCCCCCCG
T ss_pred CCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHHhhhcccccceEEecCCCcceecCH
Confidence 88888885 666 55 788888888888885444 221 456788888775543
No 376
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.32 E-value=1.5e-12 Score=131.03 Aligned_cols=103 Identities=17% Similarity=0.125 Sum_probs=48.9
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCc-hhhcCCCCCCE-EEccCCcCCCCCCccccCCccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIP-TEIGKLSKLLT-LDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++++|+|++|+|+.+.+..|++|++|++|+|++|++.+.+| ..|.++++|+. +++++|+|++..|..|..+++|+.|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 44555555555554433445555555555555555443333 23444554443 33444555544444455555555555
Q ss_pred cccccccCCCCccccccccccEEec
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDL 105 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l 105 (552)
+++|+|.+..+..+....++..|++
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred ccccccccCCchhhcccchhhhhhh
Confidence 5555555333333434444444444
No 377
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.32 E-value=8.1e-15 Score=134.98 Aligned_cols=111 Identities=23% Similarity=0.217 Sum_probs=98.9
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|+|++|++++ +| .+..+++|++|+|++|.|+ .+|..+..+++|+.|+|++|++++ +| .+..+++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 5789999999999998 66 8999999999999999999 788888889999999999999995 56 688999999999
Q ss_pred cccccccCCCC-ccccccccccEEeccCCCCCCCCCC
Q 008828 81 LNNNSLTGAIP-PSLSNMSQLAFLDLSYNNLSGPVPS 116 (552)
Q Consensus 81 l~~N~l~~~~p-~~~~~l~~L~~l~l~~N~l~~~~~~ 116 (552)
|++|+|++..+ ..+..+++|+.|++++|++++.+|.
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999994332 4788999999999999999887654
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.29 E-value=1e-11 Score=129.39 Aligned_cols=121 Identities=26% Similarity=0.255 Sum_probs=92.3
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|++|++++|++++. + ++++++|++|++++|...+.+ .+.++++|+.|+|++|++++ +| +..+++|+.|+
T Consensus 126 l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~ 197 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLN 197 (457)
T ss_dssp CTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEE
Confidence 56889999999999884 3 788888888888888555455 37788888888888888885 55 77888888888
Q ss_pred cccccccCCCCccccccccccEEeccCCCCCCCCCCccc--CcccccCCccccC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLICA 132 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~--~~~~l~~N~~~c~ 132 (552)
+++|++++. .+..+++|+.|++++|+|++.+...+. +.+++++|.+...
T Consensus 198 l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 198 CDTNNITKL---DLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CCSSCCSCC---CCTTCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC
T ss_pred CcCCcCCee---ccccCCCCCEEECcCCcccccCccccCCCCEEEeeCCcCCCc
Confidence 888888854 377788888888888888875321111 6778888877654
No 379
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.29 E-value=1.5e-11 Score=118.38 Aligned_cols=145 Identities=13% Similarity=0.070 Sum_probs=112.6
Q ss_pred HHhcCCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-ccccceeeeEeecCCceeEE
Q 008828 227 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLV 305 (552)
Q Consensus 227 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~niv~l~~~~~~~~~~~lv 305 (552)
....+|.+...+|.|+.+.||++... ++.+++|+...... .....+.+|+.++..+. +..+.++++++...+..++|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34456777778888888999999765 68999999865321 11235788999998884 67788999999888889999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 008828 306 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-------------------------------------- 347 (552)
Q Consensus 306 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------- 347 (552)
|||++|.+|.+.+. +......++.+++++|..||+..
T Consensus 89 ~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp EECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999877642 12234578899999999999810
Q ss_pred ------------------CCceEEcCCCCCceeeCCCCceEEcccccce
Q 008828 348 ------------------DPKIIHRDVKAANILLDEYYEAVVGDFGLAK 378 (552)
Q Consensus 348 ------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 378 (552)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1469999999999999876566799999875
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.26 E-value=2.2e-11 Score=126.71 Aligned_cols=116 Identities=25% Similarity=0.340 Sum_probs=66.1
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
+|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ ++|++|+|++|++++ +| .++.+++|+.|+++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 56666666666665 44 46666666666666666663 44322 356666666666663 44 46666666666666
Q ss_pred cccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCcccc
Q 008828 83 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLIC 131 (552)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~~c 131 (552)
+|++++ +|... ++|+.|++++|.++. +|.+.. +.+++++|.+..
T Consensus 204 ~N~l~~-l~~~~---~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 204 NNSLKK-LPDLP---LSLESIVAGNNILEE-LPELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp SSCCSS-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSS
T ss_pred CCcCCc-CCCCc---CcccEEECcCCcCCc-ccccCCCCCCCEEECCCCcCCc
Confidence 666663 33322 356666666666663 333211 566777777654
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.24 E-value=3.7e-13 Score=134.47 Aligned_cols=129 Identities=19% Similarity=0.221 Sum_probs=93.4
Q ss_pred CCcccEeccCCCCCccc-ccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCC-cCCCC-CCccccCCcccc
Q 008828 1 MVLLCYRGAPSQNLSGT-LSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNN-FFTGP-IPSTVSHLETLQ 77 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~~L~ 77 (552)
+++|++|+|++|++++. +|..+..+++|++|+|++|.+++..+..+.++++|++|+|++| .+++. ++..+..+++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 46788888888887765 7777888888888888888887777777888888888888888 56642 555577788888
Q ss_pred ccccccc-cccCC-CCccccccc-cccEEeccCC--CCC-CCCCCcc-----cCcccccCCcc
Q 008828 78 YLRLNNN-SLTGA-IPPSLSNMS-QLAFLDLSYN--NLS-GPVPSFH-----AKTFNITGNSL 129 (552)
Q Consensus 78 ~L~l~~N-~l~~~-~p~~~~~l~-~L~~l~l~~N--~l~-~~~~~~~-----~~~~~l~~N~~ 129 (552)
.|+|++| .+++. ++..+..++ +|+.|+|++| .++ +.++..+ .+.+++++|.+
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 8888888 77743 466677777 8888888888 344 2222221 26677777763
No 382
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.23 E-value=8.6e-13 Score=133.41 Aligned_cols=108 Identities=18% Similarity=0.238 Sum_probs=52.7
Q ss_pred ccEeccCCCCCccccc----ccccCCC-CCcEEecccCccCCCCchhhcCC-----CCCCEEEccCCcCCCCCCcccc--
Q 008828 4 LCYRGAPSQNLSGTLS----SSIGNLT-NLQLVLLQNNNISGHIPTEIGKL-----SKLLTLDLSNNFFTGPIPSTVS-- 71 (552)
Q Consensus 4 l~~L~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~-- 71 (552)
|++|+|++|++++..+ ..|..++ +|++|+|++|.|++..+..|..+ ++|+.|+|++|.+++..+..+.
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 5555555555555444 4445555 55555555555554444444443 5555555555555543333222
Q ss_pred --CC-ccccccccccccccCCCCccccc-----cccccEEeccCCCCC
Q 008828 72 --HL-ETLQYLRLNNNSLTGAIPPSLSN-----MSQLAFLDLSYNNLS 111 (552)
Q Consensus 72 --~l-~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~l~l~~N~l~ 111 (552)
.+ ++|+.|+|++|+|++..+..+.. .++|+.|+|++|.|+
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 22 45555555555555433332222 135555555555555
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.21 E-value=2.6e-11 Score=130.52 Aligned_cols=52 Identities=27% Similarity=0.265 Sum_probs=28.1
Q ss_pred ccccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc--CcccccCCccc
Q 008828 74 ETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLI 130 (552)
Q Consensus 74 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~--~~~~l~~N~~~ 130 (552)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+..++ ... +.++|++|.+.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~-~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM-LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC-CCTTCCEEECCSSCCC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc-ccccCcEEeCCCCCCC
Confidence 455666666666663 44 234556666666666664433 211 45566666554
No 384
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.21 E-value=2.8e-12 Score=129.64 Aligned_cols=125 Identities=18% Similarity=0.169 Sum_probs=107.1
Q ss_pred EeccCCCCCcccccccccCCCCCcEEecccCccCCCCc----hhhcCCC-CCCEEEccCCcCCCCCCccccCC-----cc
Q 008828 6 YRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIP----TEIGKLS-KLLTLDLSNNFFTGPIPSTVSHL-----ET 75 (552)
Q Consensus 6 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~ 75 (552)
++.|+.|++++.+|..+...++|++|+|++|.|++..+ ..|.+++ +|+.|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 67899999999999888888889999999999997766 7888999 99999999999997777777765 99
Q ss_pred ccccccccccccCCCCcccccc-----ccccEEeccCCCCCCCCCCc----------ccCcccccCCccc
Q 008828 76 LQYLRLNNNSLTGAIPPSLSNM-----SQLAFLDLSYNNLSGPVPSF----------HAKTFNITGNSLI 130 (552)
Q Consensus 76 L~~L~l~~N~l~~~~p~~~~~l-----~~L~~l~l~~N~l~~~~~~~----------~~~~~~l~~N~~~ 130 (552)
|+.|+|++|+|++..+..+... ++|+.|+|++|+|++..+.. ..+.++|++|.+.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 9999999999997776655444 89999999999999876532 3377899999875
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.21 E-value=1.1e-12 Score=133.81 Aligned_cols=111 Identities=20% Similarity=0.269 Sum_probs=69.2
Q ss_pred CCcccEeccCCCCCcc----cccccccCCCCCcEEecccCccCCCCchhhc----CC---------CCCCEEEccCCcCC
Q 008828 1 MVLLCYRGAPSQNLSG----TLSSSIGNLTNLQLVLLQNNNISGHIPTEIG----KL---------SKLLTLDLSNNFFT 63 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~l---------~~L~~L~l~~N~l~ 63 (552)
+++|++|+|++|.+.+ .+|..+.++++|+.|+|++|.|++..+..+. .+ ++|++|+|++|+++
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 3667777777777776 4666777777777777777777533232232 33 67777777777765
Q ss_pred -CCCC---ccccCCcccccccccccccc--C---CCCccccccccccEEeccCCCCC
Q 008828 64 -GPIP---STVSHLETLQYLRLNNNSLT--G---AIPPSLSNMSQLAFLDLSYNNLS 111 (552)
Q Consensus 64 -~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~l~l~~N~l~ 111 (552)
+.+| ..+..+++|+.|+|++|+|+ | ..|..+..+++|+.|+|++|.|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 2333 24555666667777766665 2 23335666666666666666664
No 386
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.21 E-value=1.7e-11 Score=117.55 Aligned_cols=137 Identities=15% Similarity=0.073 Sum_probs=101.0
Q ss_pred CCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccc--cceeeeEeecCCceeEEEee
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGFCMTTTERLLVYPY 308 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~n--iv~l~~~~~~~~~~~lv~e~ 308 (552)
++.+..+.+.|..+.||++...+|+.+++|+..... ...+..|+.+++.+.+.+ +.+++++....+..++||||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 344333334566699999987778889999976431 234678999998886544 45688888877788999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC----------------------------------------- 347 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 347 (552)
++|.++. ... .+ ...++.++++.|..||+..
T Consensus 97 i~G~~l~--~~~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 97 VPGQDLL--SSH---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp CSSEETT--TSC---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred cCCcccC--cCc---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 9998884 211 12 3367788888888888742
Q ss_pred --------------CCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 348 --------------DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 348 --------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
...++|+|++|.||+++++..+.|+|||.+..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998753
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.21 E-value=3.8e-13 Score=137.31 Aligned_cols=130 Identities=16% Similarity=0.186 Sum_probs=101.6
Q ss_pred CCcccEeccCCC---CCcccccccc-------cCCCCCcEEecccCccCC----CCchhhcCCCCCCEEEccCCcCCCCC
Q 008828 1 MVLLCYRGAPSQ---NLSGTLSSSI-------GNLTNLQLVLLQNNNISG----HIPTEIGKLSKLLTLDLSNNFFTGPI 66 (552)
Q Consensus 1 l~~l~~L~l~~n---~l~~~~p~~~-------~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~ 66 (552)
+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.|++ .+|..+.++++|+.|+|++|.+++..
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 578999999996 4455566555 789999999999999996 47888999999999999999997443
Q ss_pred Cccc----cCC---------cccccccccccccc-CCCC---ccccccccccEEeccCCCCC--C---CCC-C----ccc
Q 008828 67 PSTV----SHL---------ETLQYLRLNNNSLT-GAIP---PSLSNMSQLAFLDLSYNNLS--G---PVP-S----FHA 119 (552)
Q Consensus 67 p~~~----~~l---------~~L~~L~l~~N~l~-~~~p---~~~~~l~~L~~l~l~~N~l~--~---~~~-~----~~~ 119 (552)
+..+ ..+ ++|+.|+|++|+|+ +.+| ..+..+++|+.|+|++|.|+ + ..+ . ...
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L 218 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQEL 218 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTC
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCc
Confidence 3333 334 89999999999997 4445 46778899999999999998 2 222 1 122
Q ss_pred CcccccCCccc
Q 008828 120 KTFNITGNSLI 130 (552)
Q Consensus 120 ~~~~l~~N~~~ 130 (552)
+.++|++|.+.
T Consensus 219 ~~L~Ls~n~l~ 229 (386)
T 2ca6_A 219 KVLDLQDNTFT 229 (386)
T ss_dssp CEEECCSSCCH
T ss_pred cEEECcCCCCC
Confidence 78899999873
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.21 E-value=2.7e-13 Score=135.47 Aligned_cols=126 Identities=21% Similarity=0.216 Sum_probs=101.0
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCC-CchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGH-IPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|+.|+|++|.+++..|..++.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5688999999998886554 56789999999999998855 778888999999999999998877778888899999999
Q ss_pred cccc-cccCC-CCccccccccccEEeccCC-CCCCC-CCCc------ccCcccccCCc
Q 008828 81 LNNN-SLTGA-IPPSLSNMSQLAFLDLSYN-NLSGP-VPSF------HAKTFNITGNS 128 (552)
Q Consensus 81 l~~N-~l~~~-~p~~~~~l~~L~~l~l~~N-~l~~~-~~~~------~~~~~~l~~N~ 128 (552)
|++| .+++. ++..+..+++|+.|+|++| .+++. ++.. ..+.+++++|.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 9999 67642 5667888899999999999 88753 2221 23677888884
No 389
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.19 E-value=7e-11 Score=122.94 Aligned_cols=97 Identities=24% Similarity=0.321 Sum_probs=55.3
Q ss_pred CCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccccccCCCCccccccccccEEec
Q 008828 26 TNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDL 105 (552)
Q Consensus 26 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 105 (552)
++|++|+|++|++++ +| .|.++++|++|++++|++++ +|..+ ++|+.|++++|++++ +| .+..+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 456666666666653 55 36666666666666666663 44432 356666666666663 44 4666666666666
Q ss_pred cCCCCCCCCCCc-ccCcccccCCccc
Q 008828 106 SYNNLSGPVPSF-HAKTFNITGNSLI 130 (552)
Q Consensus 106 ~~N~l~~~~~~~-~~~~~~l~~N~~~ 130 (552)
++|.+++.+... ..+.+++++|.+.
T Consensus 203 ~~N~l~~l~~~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 203 DNNSLKKLPDLPLSLESIVAGNNILE 228 (454)
T ss_dssp CSSCCSSCCCCCTTCCEEECCSSCCS
T ss_pred CCCcCCcCCCCcCcccEEECcCCcCC
Confidence 666666532211 1255666666554
No 390
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.18 E-value=7.1e-11 Score=127.07 Aligned_cols=53 Identities=23% Similarity=0.311 Sum_probs=28.7
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCC
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFT 63 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 63 (552)
+|++|+|++|++++ +|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|.++
T Consensus 62 ~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~ 114 (622)
T 3g06_A 62 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT 114 (622)
T ss_dssp TCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC
T ss_pred CCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC
Confidence 45666666666554 332 3555666666666655 3443 4455555555555555
No 391
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.13 E-value=2.5e-10 Score=115.07 Aligned_cols=142 Identities=13% Similarity=0.179 Sum_probs=106.5
Q ss_pred CCeeeeeCceEEEEEEECCCcEEEEEEec--cCccCchHHHHHHHHHHHhhcc--ccccceeeeEeecC---CceeEEEe
Q 008828 235 KNLVGKGGFGNVYKGYLQDGTVVAVKRLK--DGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGFCMTT---TERLLVYP 307 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~e~~~l~~~~--h~niv~l~~~~~~~---~~~~lv~e 307 (552)
.+.++.|.++.||+....+ ..+++|+.. ..........+.+|+.+++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4578899999999988764 678888876 3332222345778999998886 45578889888766 45899999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 008828 308 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC---------------------------------------- 347 (552)
Q Consensus 308 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------- 347 (552)
|++|..+.+... ..++...+..++.++++.|..||+..
T Consensus 122 ~v~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (359)
T 3dxp_A 122 FVSGRVLWDQSL--PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS 199 (359)
T ss_dssp CCCCBCCCCTTC--TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred ecCCeecCCCcc--ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence 999987754222 24788889999999999999999731
Q ss_pred ---------------CCceEEcCCCCCceeeCCCCc--eEEccccccee
Q 008828 348 ---------------DPKIIHRDVKAANILLDEYYE--AVVGDFGLAKL 379 (552)
Q Consensus 348 ---------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~ 379 (552)
.+.++|||+++.||+++.++. +.|.||+.+..
T Consensus 200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999999864
No 392
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.06 E-value=1.9e-10 Score=115.53 Aligned_cols=132 Identities=22% Similarity=0.137 Sum_probs=90.8
Q ss_pred CCcccEeccCCCCCccccc-ccccCCCCCcE-EecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCc----
Q 008828 1 MVLLCYRGAPSQNLSGTLS-SSIGNLTNLQL-VLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLE---- 74 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p-~~~~~l~~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~---- 74 (552)
|++|++|+|++|++.+.+| ..|.++++|.+ +++++|+|+...|..|.++++|++|++++|++++..+..+....
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 5789999999999877655 57889988775 66778999977788899999999999999998854443333222
Q ss_pred ----------------------cccccccccccccCCCCccccccccccEEeccC-CCCCCCCCCccc-----CcccccC
Q 008828 75 ----------------------TLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY-NNLSGPVPSFHA-----KTFNITG 126 (552)
Q Consensus 75 ----------------------~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~-N~l~~~~~~~~~-----~~~~l~~ 126 (552)
.|+.|+|++|+|+ .+|.......+|+.|++++ |.++.++++.+. +.+++++
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTT
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCC
Confidence 3455666666666 3444333445666666653 555555444443 5677777
Q ss_pred CccccCC
Q 008828 127 NSLICAT 133 (552)
Q Consensus 127 N~~~c~~ 133 (552)
|.+...+
T Consensus 212 N~l~~lp 218 (350)
T 4ay9_X 212 TRIHSLP 218 (350)
T ss_dssp SCCCCCC
T ss_pred CCcCccC
Confidence 7776543
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.03 E-value=3.5e-10 Score=111.19 Aligned_cols=187 Identities=19% Similarity=0.183 Sum_probs=123.3
Q ss_pred CCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-ccc--cceeeeEeecCC---ceeEEEee
Q 008828 235 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRN--LLRLIGFCMTTT---ERLLVYPY 308 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~n--iv~l~~~~~~~~---~~~lv~e~ 308 (552)
.+.++.|.+..||+.. ..+++|+.... .....+.+|..++..+. +.. +.+++....... ..++||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4578999999999863 56888886432 23456889999998873 333 334555443333 34789999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhc------------------------------------------
Q 008828 309 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ------------------------------------------ 346 (552)
Q Consensus 309 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------ 346 (552)
++|.++..... ..++..++..++.++++.+..||+.
T Consensus 98 i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 98 IKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred cCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99988765433 2477888888999999999999861
Q ss_pred -------------CCCceEEcCCCCCceeeCC--CCceEEcccccceecCCCCCce---e----------eccccccccc
Q 008828 347 -------------CDPKIIHRDVKAANILLDE--YYEAVVGDFGLAKLLDHCDSHV---T----------TAVRGTVGHI 398 (552)
Q Consensus 347 -------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~---~----------~~~~gt~~y~ 398 (552)
..+.++|+|++|.||++++ ...+.|.||+.+..-+...... . .......++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 1245899999999999998 4567899999987533210000 0 0000111122
Q ss_pred C-chhhccCCCCCccchhHHHHHHHHHHhCCCccc
Q 008828 399 A-PEYLSTGQSSEKTDVFGFGILLLELISGLRALE 432 (552)
Q Consensus 399 a-PE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~ 432 (552)
. |+..... ....+.|++|.++|.+.+|..++.
T Consensus 256 ~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 2 2222111 223689999999999999977664
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.02 E-value=3.9e-12 Score=132.82 Aligned_cols=130 Identities=15% Similarity=0.082 Sum_probs=89.3
Q ss_pred CCcccEeccCCCCCcccc-----cccccCCCCCcEEecccCccCCC----CchhhcCCCCCCEEEccCCcCCCCCCcccc
Q 008828 1 MVLLCYRGAPSQNLSGTL-----SSSIGNLTNLQLVLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTGPIPSTVS 71 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 71 (552)
+++|++|+|++|.+.+.. +..+..+++|+.|+|++|.++.. ++..+.++++|+.|+|++|.+++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 467888888888877642 22334678888888888888743 567777788888888888887643333332
Q ss_pred C-----CccccccccccccccCC----CCccccccccccEEeccCCCCCCCCCC----------cccCcccccCCccc
Q 008828 72 H-----LETLQYLRLNNNSLTGA----IPPSLSNMSQLAFLDLSYNNLSGPVPS----------FHAKTFNITGNSLI 130 (552)
Q Consensus 72 ~-----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~~~----------~~~~~~~l~~N~~~ 130 (552)
. .++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++..+. ...+.+++++|.+.
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 2 25788888888887754 455566678888888888887654321 12366777777664
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.91 E-value=4.4e-11 Score=124.82 Aligned_cols=130 Identities=18% Similarity=0.129 Sum_probs=102.2
Q ss_pred CCcccEeccCCCCCccc----ccccccCCCCCcEEecccCccCCCCchhhcC-----CCCCCEEEccCCcCCCC----CC
Q 008828 1 MVLLCYRGAPSQNLSGT----LSSSIGNLTNLQLVLLQNNNISGHIPTEIGK-----LSKLLTLDLSNNFFTGP----IP 67 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~----~p 67 (552)
+++|++|+|++|+++.. ++..+.++++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 46899999999999875 6778888999999999999997544444433 37999999999999854 45
Q ss_pred ccccCCccccccccccccccCCCCccccc-----cccccEEeccCCCCCC----CCCCcc-----cCcccccCCccc
Q 008828 68 STVSHLETLQYLRLNNNSLTGAIPPSLSN-----MSQLAFLDLSYNNLSG----PVPSFH-----AKTFNITGNSLI 130 (552)
Q Consensus 68 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~l~l~~N~l~~----~~~~~~-----~~~~~l~~N~~~ 130 (552)
..+..+++|+.|+|++|++.+..+..+.. +++|+.|+|++|++++ .++..+ .+.+++++|++.
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 56777899999999999998654444443 6799999999999985 334322 278899999875
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.89 E-value=2.8e-11 Score=122.38 Aligned_cols=129 Identities=19% Similarity=0.150 Sum_probs=73.5
Q ss_pred CcccEeccCCCCCcccccccc-cCCCCCcEEecccCccCCCCchhh-----cCCCCCCEEEccCCcCCCC----CCcccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSI-GNLTNLQLVLLQNNNISGHIPTEI-----GKLSKLLTLDLSNNFFTGP----IPSTVS 71 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~----~p~~~~ 71 (552)
++|+.|+|++|.++......+ ..+++|+.|+|++|.|+..-...+ ...++|+.|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 356666666666654322222 234566677777776653322222 2356777777777776521 233345
Q ss_pred CCccccccccccccccCC----CCccccccccccEEeccCCCCCCCCCC---------cccCcccccCCccc
Q 008828 72 HLETLQYLRLNNNSLTGA----IPPSLSNMSQLAFLDLSYNNLSGPVPS---------FHAKTFNITGNSLI 130 (552)
Q Consensus 72 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~~~---------~~~~~~~l~~N~~~ 130 (552)
.+++|++|+|++|.|... ++..+..+++|+.|+|++|.|+..... ...+.++|++|.+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 567777777777777632 234455666777777777777642211 11256777777653
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=2.5e-09 Score=106.35 Aligned_cols=101 Identities=14% Similarity=0.062 Sum_probs=56.4
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCC-EEEccCCcCCCCCCccccCCccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLL-TLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
++|+.|+|++|+++.+.+..|.++++|+.|+|.+| ++.+-+..|.+|++|+ .|+|++ .++...+.+|.+|++|+.|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 45556666655555555555666666666666555 4434444555566665 666655 44433344555666666666
Q ss_pred cccccccCCCCccccccccccEEe
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLD 104 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~ 104 (552)
+++|++...-+.+|.++++|+.|+
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 655555544445555555555554
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=4.1e-09 Score=104.72 Aligned_cols=129 Identities=17% Similarity=0.173 Sum_probs=100.3
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhc---------------------------------
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIG--------------------------------- 47 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--------------------------------- 47 (552)
|++|+.|+|++ +++.+.+..|.+|++|+.|+|++|.+....+..|.
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 57899999999 88887788899999999999999976311111100
Q ss_pred ---------------------------------------------CCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 48 ---------------------------------------------KLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 48 ---------------------------------------------~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
.+++|+.|+|++|+++...+..|.+|++|+.|+|+
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 27899999999999995555679999999999999
Q ss_pred cccccCCCCcccccccccc-EEeccCCCCCCCCCCccc-----CcccccCCccccC
Q 008828 83 NNSLTGAIPPSLSNMSQLA-FLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 132 (552)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~-~l~l~~N~l~~~~~~~~~-----~~~~l~~N~~~c~ 132 (552)
+| +...-+.+|.+|++|+ .|++.+ .++.+.+..|. +.+++.+|.+...
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 98 7756678899999999 999988 77777666665 5667778877554
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.83 E-value=1.5e-10 Score=116.88 Aligned_cols=113 Identities=15% Similarity=0.186 Sum_probs=90.2
Q ss_pred CcccEeccCCCCCcccccccc-----cCCCCCcEEecccCccCC----CCchhhcCCCCCCEEEccCCcCCCC----CCc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSI-----GNLTNLQLVLLQNNNISG----HIPTEIGKLSKLLTLDLSNNFFTGP----IPS 68 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~p~ 68 (552)
++|+.|+|++|+++......+ ...++|+.|+|++|.|+. .++..+..+++|++|+|++|.|+.. ++.
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 478999999999987554444 357899999999999974 2455667899999999999998742 245
Q ss_pred cccCCccccccccccccccCC----CCccccccccccEEeccCCCCCCCC
Q 008828 69 TVSHLETLQYLRLNNNSLTGA----IPPSLSNMSQLAFLDLSYNNLSGPV 114 (552)
Q Consensus 69 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~ 114 (552)
.+..+++|+.|+|++|.|+.. ++..+..+++|+.|+|++|.|+...
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g 255 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEG 255 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHH
Confidence 567788999999999999843 3445566789999999999998543
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.72 E-value=2.2e-09 Score=102.22 Aligned_cols=40 Identities=28% Similarity=0.353 Sum_probs=18.5
Q ss_pred CCCCCcEEecccCccCC--CCchhhcCCCCCCEEEccCCcCC
Q 008828 24 NLTNLQLVLLQNNNISG--HIPTEIGKLSKLLTLDLSNNFFT 63 (552)
Q Consensus 24 ~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~ 63 (552)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 34445555555555443 22233444445555555555544
No 401
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.64 E-value=2.1e-09 Score=97.26 Aligned_cols=110 Identities=14% Similarity=0.171 Sum_probs=60.7
Q ss_pred CcccEeccCCC-CCccc----ccccccCCCCCcEEecccCccCCC----CchhhcCCCCCCEEEccCCcCCCC----CCc
Q 008828 2 VLLCYRGAPSQ-NLSGT----LSSSIGNLTNLQLVLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTGP----IPS 68 (552)
Q Consensus 2 ~~l~~L~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~ 68 (552)
++|++|+|++| .+... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|... +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 45666666666 65532 233455566666666666666521 233344456666666666666522 233
Q ss_pred cccCCcccccccc--ccccccCC----CCccccccccccEEeccCCCCC
Q 008828 69 TVSHLETLQYLRL--NNNSLTGA----IPPSLSNMSQLAFLDLSYNNLS 111 (552)
Q Consensus 69 ~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~ 111 (552)
.+...++|+.|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4455566666666 55666532 2233444456666666666553
No 402
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.62 E-value=3e-07 Score=90.78 Aligned_cols=136 Identities=18% Similarity=0.202 Sum_probs=101.3
Q ss_pred CCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccc----cccceeeeEeecCCceeEEE
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH----RNLLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h----~niv~l~~~~~~~~~~~lv~ 306 (552)
.+...+.++.|....||+. +..+++|+..... ....+..|..++..+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4555678999999999998 6678888774321 13457889998888865 123455554 5678999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCC--------------------------------------
Q 008828 307 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD-------------------------------------- 348 (552)
Q Consensus 307 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-------------------------------------- 348 (552)
||++|.++..... ..++...+..++.++++.+..||+...
T Consensus 107 e~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 107 KYIKGERITYEQY--HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp ECCCCBCCCHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred eecCCcccccccc--ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988864332 246777788888888888888885421
Q ss_pred ----------------------CceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 349 ----------------------PKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 349 ----------------------~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
+.++|+|++|.||+++.+..+.|.||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999866679999999864
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.57 E-value=6e-07 Score=87.01 Aligned_cols=75 Identities=20% Similarity=0.208 Sum_probs=59.5
Q ss_pred CCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcccc---ccceeeeEeecCCceeEEEeeccC
Q 008828 235 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCMTTTERLLVYPYMSN 311 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~---niv~l~~~~~~~~~~~lv~e~~~~ 311 (552)
.+.||.|.++.||++...+|+.++||+..... ......|..|++.++.+.+. .+.+++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 46799999999999998889999999975332 22235688999999999765 477777764 47999999998
Q ss_pred CCh
Q 008828 312 GSV 314 (552)
Q Consensus 312 g~L 314 (552)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 404
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.55 E-value=2.7e-08 Score=94.66 Aligned_cols=78 Identities=22% Similarity=0.249 Sum_probs=61.7
Q ss_pred CCcccEeccCCCCCcc--cccccccCCCCCcEEecccCccCCCCchhhcCCC--CCCEEEccCCcCCCCCCc-------c
Q 008828 1 MVLLCYRGAPSQNLSG--TLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLS--KLLTLDLSNNFFTGPIPS-------T 69 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~-------~ 69 (552)
+++|+.|+|++|+|++ .+|..++.+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|+ .
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 5789999999999998 3457788999999999999999964 3455555 999999999999876663 2
Q ss_pred ccCCccccccc
Q 008828 70 VSHLETLQYLR 80 (552)
Q Consensus 70 ~~~l~~L~~L~ 80 (552)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 44566666655
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.49 E-value=2.6e-08 Score=107.25 Aligned_cols=103 Identities=10% Similarity=0.059 Sum_probs=64.3
Q ss_pred ccEeccCCCCC-cc-cccccccCCCCCcEEecccCccCCC----CchhhcCCCCCCEEEccCCcCCCC----CCccccCC
Q 008828 4 LCYRGAPSQNL-SG-TLSSSIGNLTNLQLVLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTGP----IPSTVSHL 73 (552)
Q Consensus 4 l~~L~l~~n~l-~~-~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l 73 (552)
|++|+|++|.- +. .++..+.++++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++. ++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 77777777651 11 1222334677777777777777654 334455677777777777777632 22334566
Q ss_pred ccccccccccccccCCCCccccccccccEEeccC
Q 008828 74 ETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 107 (552)
Q Consensus 74 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 107 (552)
++|+.|+|++|.+.+ +|..+..+++|+.|++++
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 777777777777763 556666667777777764
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.39 E-value=2.3e-07 Score=99.82 Aligned_cols=126 Identities=11% Similarity=0.042 Sum_probs=90.1
Q ss_pred CCcccEeccCCCCCccc----ccccccCCCCCcEEecccCccCC----CCchhhcCCCCCCEEEccCCcCCCCCCccccC
Q 008828 1 MVLLCYRGAPSQNLSGT----LSSSIGNLTNLQLVLLQNNNISG----HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSH 72 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 72 (552)
+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.++++|+.|+|++|.+.+ +|..+..
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 57899999999988765 44556788999999999999973 344556788999999999999884 6777888
Q ss_pred Ccccccccccccccc---CCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCCc
Q 008828 73 LETLQYLRLNNNSLT---GAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNS 128 (552)
Q Consensus 73 l~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N~ 128 (552)
+++|+.|+++++... +..+..+..+++|+.|+++++... .+|..+. +.++|++|.
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCc
Confidence 888888888754322 233455666777777777775433 2333322 566777765
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.36 E-value=3.5e-06 Score=82.49 Aligned_cols=135 Identities=18% Similarity=0.179 Sum_probs=94.8
Q ss_pred CeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcccc---ccceeeeEee-cCCceeEEEeeccC
Q 008828 236 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCM-TTTERLLVYPYMSN 311 (552)
Q Consensus 236 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 311 (552)
+.++.|....||+. +..+++|+... ......+..|..++..+.+. .+.+++.++. ..+..++||||++|
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 56788888899987 56788887532 12345688999999988642 2456666664 44567899999999
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhc---------------------------------------------
Q 008828 312 GSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ--------------------------------------------- 346 (552)
Q Consensus 312 g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------------------------------------------- 346 (552)
..+..... ..++......++.++++.|..||+.
T Consensus 98 ~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 98 QILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp EECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred eECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 87765321 1245555666666666666666642
Q ss_pred ------------CCCceEEcCCCCCceeeCC---CCc-eEEccccccee
Q 008828 347 ------------CDPKIIHRDVKAANILLDE---YYE-AVVGDFGLAKL 379 (552)
Q Consensus 347 ------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfg~~~~ 379 (552)
..+.++|+|+++.||+++. ++. +.|.||+.+..
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999997 455 47999998864
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.33 E-value=1.6e-06 Score=86.87 Aligned_cols=144 Identities=12% Similarity=0.146 Sum_probs=89.6
Q ss_pred Cee-eeeCceEEEEEEEC-------CCcEEEEEEeccCcc--CchHHHHHHHHHHHhhccc---cccceeeeEeecC---
Q 008828 236 NLV-GKGGFGNVYKGYLQ-------DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVH---RNLLRLIGFCMTT--- 299 (552)
Q Consensus 236 ~~i-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h---~niv~l~~~~~~~--- 299 (552)
+.| +.|....+|+.... +++.+++|+...... ......+..|..++..+.. -.+.++++++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999988764 267888998754320 1011346788888887753 2466788887655
Q ss_pred CceeEEEeeccCCChhhhhccC------CCCCHHHHHHHHHHHHHHH---------------------------------
Q 008828 300 TERLLVYPYMSNGSVASRLKAK------PSLDWATRKRIALGAARGL--------------------------------- 340 (552)
Q Consensus 300 ~~~~lv~e~~~~g~L~~~l~~~------~~l~~~~~~~i~~~ia~~l--------------------------------- 340 (552)
...++||||++|..+.+.+... ..++...+..++.++++.|
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWV 185 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHHH
T ss_pred CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHHH
Confidence 3568999999987765421000 0122222222333333333
Q ss_pred ---------------------HHHhhcC-------CCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 341 ---------------------LYLHEQC-------DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 341 ---------------------~~LH~~~-------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
.+|.+.. .+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 186 RSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred HHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 3332211 35799999999999999654578999998863
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.31 E-value=3.8e-06 Score=84.24 Aligned_cols=138 Identities=11% Similarity=0.094 Sum_probs=87.7
Q ss_pred CCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccc--cceeeeEeecC-CceeEEEeeccC
Q 008828 235 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGFCMTT-TERLLVYPYMSN 311 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~n--iv~l~~~~~~~-~~~~lv~e~~~~ 311 (552)
.+.++.|....+|+... ++..+++|+.... ..+..|..++..+.... +.++++++... ...++||||+++
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 45688999999999876 4788999987432 24778888888876433 45677776654 568999999998
Q ss_pred CChhhh------------------hccCC-----C---C---------CHHHH---------------------HHHHHH
Q 008828 312 GSVASR------------------LKAKP-----S---L---------DWATR---------------------KRIALG 335 (552)
Q Consensus 312 g~L~~~------------------l~~~~-----~---l---------~~~~~---------------------~~i~~~ 335 (552)
.++.+. ++... . + +|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 665321 00000 0 0 01101 011111
Q ss_pred HHHHHHHHhhc-CCCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 336 AARGLLYLHEQ-CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 336 ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
+...+.++... ..+.++|+|+++.||++++++.+.|.||+.+..
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 22222233211 125789999999999998877788999998865
No 410
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.29 E-value=5.6e-06 Score=79.35 Aligned_cols=135 Identities=19% Similarity=0.141 Sum_probs=96.4
Q ss_pred eeeeeCce-EEEEEEEC-CCcEEEEEEeccCccCchHHHHHHHHHHHhhcc-ccccceeeeEeecCCceeEEEeeccCCC
Q 008828 237 LVGKGGFG-NVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLVYPYMSNGS 313 (552)
Q Consensus 237 ~iG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~niv~l~~~~~~~~~~~lv~e~~~~g~ 313 (552)
.+..|..| .||+.... ++..+++|+-... ....+..|...++.+. +--+-++++++.+.+..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556655 68987754 4678999986532 2446778999888774 2235678888888899999999999988
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------------
Q 008828 314 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQC---------------------------------------------- 347 (552)
Q Consensus 314 L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------------- 347 (552)
+.+..... ......++.+++..|..||+..
T Consensus 107 ~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 107 AFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred ccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 76654321 2234456666777777777421
Q ss_pred ---------CCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 348 ---------DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 348 ---------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
.+.++|+|+.+.||++++++.+-|.||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12389999999999999877777999998853
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.28 E-value=1.2e-08 Score=109.85 Aligned_cols=110 Identities=18% Similarity=0.217 Sum_probs=55.8
Q ss_pred CCcccEecc---------CCCCCccccccccc-CCCCCcEEecccCccCCCCchhhc-CCCCCCEEEcc--C----CcCC
Q 008828 1 MVLLCYRGA---------PSQNLSGTLSSSIG-NLTNLQLVLLQNNNISGHIPTEIG-KLSKLLTLDLS--N----NFFT 63 (552)
Q Consensus 1 l~~l~~L~l---------~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~ 63 (552)
+++|++|+| +.+.+++.....+. .+++|+.|+++.|.+++.....+. ++++|+.|+|+ + |.++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 456777766 23444433222332 366667776666666644444443 46667777766 3 4444
Q ss_pred CCCCc------cccCCccccccccccccccCCCCccccc-cccccEEeccCCCCCC
Q 008828 64 GPIPS------TVSHLETLQYLRLNNNSLTGAIPPSLSN-MSQLAFLDLSYNNLSG 112 (552)
Q Consensus 64 ~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~l~l~~N~l~~ 112 (552)
. .|. .+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++
T Consensus 417 ~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~ 470 (594)
T 2p1m_B 417 L-EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSD 470 (594)
T ss_dssp C-CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSH
T ss_pred C-CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcH
Confidence 2 111 134455666666654 343322233333 5556666666665543
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.24 E-value=9.4e-08 Score=95.71 Aligned_cols=126 Identities=18% Similarity=0.154 Sum_probs=82.3
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhc--CCCCCCEEEccC--CcCCCC-----CCccc-
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIG--KLSKLLTLDLSN--NFFTGP-----IPSTV- 70 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~-----~p~~~- 70 (552)
+++|+.|+|++|.-.. ++. +. +++|+.|+|..|.++......+. ++++|+.|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l~-l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNLS-IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTCB-CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCce-ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 4789999998873222 333 43 88999999998888643333443 789999999864 222111 11122
Q ss_pred -cCCccccccccccccccCCCCcccc---ccccccEEeccCCCCCCCC----CC-----cccCcccccCCcc
Q 008828 71 -SHLETLQYLRLNNNSLTGAIPPSLS---NMSQLAFLDLSYNNLSGPV----PS-----FHAKTFNITGNSL 129 (552)
Q Consensus 71 -~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~l~l~~N~l~~~~----~~-----~~~~~~~l~~N~~ 129 (552)
..+++|+.|+|.+|.+.+..+..+. .+++|+.|+|+.|.|.+.. +. ...+.++|++|.+
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 2478999999999988743333332 5789999999999987631 11 1236778887765
No 413
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.24 E-value=1.3e-06 Score=88.82 Aligned_cols=124 Identities=14% Similarity=0.086 Sum_probs=94.7
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCC-----CCCCccccCCcc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFT-----GPIPSTVSHLET 75 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~ 75 (552)
+++|+.|+|..| ++.+-...|.+ .+|+.+.|. |.++..-+..|.+|++|+.++|.+|.+. ...+..|.+|++
T Consensus 225 ~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~ 301 (401)
T 4fdw_A 225 TSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPK 301 (401)
T ss_dssp CTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTT
T ss_pred CCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCcc
Confidence 467899999874 77777778888 789999994 5566566778999999999999998875 344567899999
Q ss_pred ccccccccccccCCCCccccccccccEEeccCCCCCCCCCCccc----CcccccCCcc
Q 008828 76 LQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSL 129 (552)
Q Consensus 76 L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~l~~N~~ 129 (552)
|+.++|.+ .++..-..+|.+|++|+.|+|.+| ++.+....|. +.+.+.+|.+
T Consensus 302 L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 302 LARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp CCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSC
T ss_pred CCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCC
Confidence 99999984 577566678999999999999655 6655555554 4566666644
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.23 E-value=4.4e-08 Score=88.54 Aligned_cols=112 Identities=18% Similarity=0.168 Sum_probs=83.7
Q ss_pred ccccccCCCCCcEEecccC-ccCCC----CchhhcCCCCCCEEEccCCcCCCC----CCccccCCccccccccccccccC
Q 008828 18 LSSSIGNLTNLQLVLLQNN-NISGH----IPTEIGKLSKLLTLDLSNNFFTGP----IPSTVSHLETLQYLRLNNNSLTG 88 (552)
Q Consensus 18 ~p~~~~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 88 (552)
+...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445778999999999999 88732 455677789999999999999732 22345556899999999999984
Q ss_pred C----CCccccccccccEEec--cCCCCCCCCCCc---------ccCcccccCCcc
Q 008828 89 A----IPPSLSNMSQLAFLDL--SYNNLSGPVPSF---------HAKTFNITGNSL 129 (552)
Q Consensus 89 ~----~p~~~~~l~~L~~l~l--~~N~l~~~~~~~---------~~~~~~l~~N~~ 129 (552)
. +...+...++|+.|+| ++|.|....... ..+.++|++|.+
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3 4566777889999999 889997532211 126677777765
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.20 E-value=2.5e-06 Score=86.79 Aligned_cols=121 Identities=15% Similarity=0.094 Sum_probs=94.9
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|+.+.|.. +++.+....|.++++|+.|+|..| ++..-...|.+ .+|+.+.|. |.++..-+..|.+|++|+.+++
T Consensus 203 ~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEe
Confidence 5788999985 488888889999999999999986 55455667777 899999994 5566455678999999999999
Q ss_pred cccccc-----CCCCccccccccccEEeccCCCCCCCCCCccc-----CcccccCC
Q 008828 82 NNNSLT-----GAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGN 127 (552)
Q Consensus 82 ~~N~l~-----~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~l~~N 127 (552)
.+|.+. ...+.+|..|++|+.++|. |.++.+....|. +.+.|..|
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 998775 3556789999999999999 457766665554 44555443
No 416
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.15 E-value=3.1e-07 Score=98.77 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=49.5
Q ss_pred cCCCCCcEEecccCccCCCCchhhc-CCCCCCEEEccCC-cCCCC-CCccccCCccccccccccccccCCCCcccc----
Q 008828 23 GNLTNLQLVLLQNNNISGHIPTEIG-KLSKLLTLDLSNN-FFTGP-IPSTVSHLETLQYLRLNNNSLTGAIPPSLS---- 95 (552)
Q Consensus 23 ~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N-~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~---- 95 (552)
..+++|+.|+|++|.+++..+..+. ++++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 4566666777776666655444454 4666777777666 33311 223334566666666666666544333332
Q ss_pred ccccccEEeccCCC
Q 008828 96 NMSQLAFLDLSYNN 109 (552)
Q Consensus 96 ~l~~L~~l~l~~N~ 109 (552)
.+++|+.|++++|.
T Consensus 182 ~~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 182 TYTSLVSLNISCLA 195 (594)
T ss_dssp TCCCCCEEECTTCC
T ss_pred cCCcCcEEEecccC
Confidence 44566666666665
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.07 E-value=4.7e-07 Score=90.62 Aligned_cols=128 Identities=14% Similarity=0.108 Sum_probs=84.3
Q ss_pred CCcccEeccCCCCCc---------ccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCcccc
Q 008828 1 MVLLCYRGAPSQNLS---------GTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS 71 (552)
Q Consensus 1 l~~l~~L~l~~n~l~---------~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 71 (552)
+++|+.|.+.++... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.+.......+.
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 368899988765431 124456678899999999988422 2343 4 389999999999987633222333
Q ss_pred --CCcccccccccc--ccccCC-----CCccc--cccccccEEeccCCCCCCCCCC--------cccCcccccCCcccc
Q 008828 72 --HLETLQYLRLNN--NSLTGA-----IPPSL--SNMSQLAFLDLSYNNLSGPVPS--------FHAKTFNITGNSLIC 131 (552)
Q Consensus 72 --~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~l~l~~N~l~~~~~~--------~~~~~~~l~~N~~~c 131 (552)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+. ...+.++|+.|.+..
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 689999999863 332211 11122 2578999999999998742211 123788999887643
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.03 E-value=2.5e-05 Score=79.44 Aligned_cols=76 Identities=14% Similarity=0.051 Sum_probs=49.2
Q ss_pred CCeeeeeCceEEEEEEEC-CCcEEEEEEeccCcc------CchHHHHHHHHHHHhhccc--cc-cceeeeEeecCCceeE
Q 008828 235 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA------IGGEIQFQTEVEMISLAVH--RN-LLRLIGFCMTTTERLL 304 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~~~h--~n-iv~l~~~~~~~~~~~l 304 (552)
.+.||.|.++.||++... +++.++||....... .....++..|.+++..+.. +. +.+++.+ +....++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999754 468899998653221 1123356778888887642 33 3455554 3455789
Q ss_pred EEeeccCC
Q 008828 305 VYPYMSNG 312 (552)
Q Consensus 305 v~e~~~~g 312 (552)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.93 E-value=4.3e-05 Score=75.74 Aligned_cols=136 Identities=17% Similarity=0.230 Sum_probs=78.3
Q ss_pred eeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcccc--ccceeee------EeecCCceeEEEee
Q 008828 237 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR--NLLRLIG------FCMTTTERLLVYPY 308 (552)
Q Consensus 237 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~--niv~l~~------~~~~~~~~~lv~e~ 308 (552)
.|+.|..+.||+....+| .+++|+.... ...+..|..++..+... .+.+++. +....+..+++|+|
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 456677889999987655 5889988642 12334455555554321 2333333 11235667899999
Q ss_pred ccCCChh-----------h---hhc---c-C--C--------CCCHHHH-------------------------------
Q 008828 309 MSNGSVA-----------S---RLK---A-K--P--------SLDWATR------------------------------- 329 (552)
Q Consensus 309 ~~~g~L~-----------~---~l~---~-~--~--------~l~~~~~------------------------------- 329 (552)
++|..+. . .++ . . + .-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 111 0 0 0 0122211
Q ss_pred HHHHHHHHHHHHHHhh----------cCCCceEEcCCCCCceeeCCCCceEEcccccce
Q 008828 330 KRIALGAARGLLYLHE----------QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 378 (552)
Q Consensus 330 ~~i~~~ia~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 378 (552)
..+..++..++.+|+. ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666663 124589999999999999888899999999875
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.81 E-value=0.00012 Score=71.34 Aligned_cols=135 Identities=16% Similarity=0.152 Sum_probs=89.8
Q ss_pred CCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcc---ccccceeeeEeecCCceeEEEeeccC
Q 008828 235 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV---HRNLLRLIGFCMTTTERLLVYPYMSN 311 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~---h~niv~l~~~~~~~~~~~lv~e~~~~ 311 (552)
.+.|+.|.+..+|+.... +..+++|+.... ....+..|...|+.+. ...+.++++++...+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 357899999999998864 678888987532 2446788999888774 25677888888878889999999998
Q ss_pred CChhh--------h---hcc--C-CC-------------------CCHHHHH---HHHH----------------HHHHH
Q 008828 312 GSVAS--------R---LKA--K-PS-------------------LDWATRK---RIAL----------------GAARG 339 (552)
Q Consensus 312 g~L~~--------~---l~~--~-~~-------------------l~~~~~~---~i~~----------------~ia~~ 339 (552)
..+.. . ++. . .. -+|.... ++.. .++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 76421 1 111 1 00 1343321 1111 11111
Q ss_pred -HHHHhh-cCCCceEEcCCCCCceeeCCCCceEEcccc
Q 008828 340 -LLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFG 375 (552)
Q Consensus 340 -l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 375 (552)
...|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223421 2356899999999999999887 8888974
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.76 E-value=3.2e-06 Score=74.55 Aligned_cols=92 Identities=14% Similarity=0.079 Sum_probs=64.5
Q ss_pred ccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCc-CCCCCCccccCC----cccccccccccc-ccCCCC
Q 008828 18 LSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNF-FTGPIPSTVSHL----ETLQYLRLNNNS-LTGAIP 91 (552)
Q Consensus 18 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p 91 (552)
+|.....--+|+.|||+++.|+..--..+.++++|+.|+|+++. ++..--..++.+ ++|++|+|++|. |+..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 44433333479999999998875444557789999999999985 653222234443 479999999975 764333
Q ss_pred ccccccccccEEeccCCC
Q 008828 92 PSLSNMSQLAFLDLSYNN 109 (552)
Q Consensus 92 ~~~~~l~~L~~l~l~~N~ 109 (552)
..+..+++|+.|+|++++
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 457788999999999875
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.76 E-value=0.00021 Score=69.05 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=55.4
Q ss_pred CCCCCCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhcccc---ccceeeeEeecCCceeEEEe
Q 008828 231 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCMTTTERLLVYP 307 (552)
Q Consensus 231 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~---niv~l~~~~~~~~~~~lv~e 307 (552)
.....+.+|.|..+.||+....||+.|++|+...... .....|..|...|+.+.-. -+.+++++. ..++|||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e 90 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP-ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc-chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence 3444567899999999999999999999998754332 2233577899988877421 244555542 3578999
Q ss_pred eccCCCh
Q 008828 308 YMSNGSV 314 (552)
Q Consensus 308 ~~~~g~L 314 (552)
|++++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9886543
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.75 E-value=3.6e-06 Score=74.27 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=57.8
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCc-cCCCCchhhcCC----CCCCEEEccCCc-CCCCCCccccCCccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNN-ISGHIPTEIGKL----SKLLTLDLSNNF-FTGPIPSTVSHLETL 76 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 76 (552)
+|+.|||+++.++..--..+..+++|+.|+|++|. |+..--..++.+ ++|+.|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 47888888888776655667888888888888884 653222334443 368888888874 663222346678888
Q ss_pred ccccccccc
Q 008828 77 QYLRLNNNS 85 (552)
Q Consensus 77 ~~L~l~~N~ 85 (552)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 888888875
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.74 E-value=0.00019 Score=73.48 Aligned_cols=78 Identities=12% Similarity=0.037 Sum_probs=46.4
Q ss_pred CCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCceeecc-cccccccCchhhccCC---CCCccchhHHHHHHHH
Q 008828 348 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAV-RGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLE 423 (552)
Q Consensus 348 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~---~~~~~Dvws~Gv~l~e 423 (552)
.+.++|+|+++.|||++.++ +++.||+.+..-... ....... .-...|++|+...... .....++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999999876 999999988743210 0000000 0113466666553211 1122445577777777
Q ss_pred HHhC
Q 008828 424 LISG 427 (552)
Q Consensus 424 lltg 427 (552)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7665
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.46 E-value=1.6e-05 Score=71.43 Aligned_cols=85 Identities=15% Similarity=0.159 Sum_probs=35.7
Q ss_pred CCCCCcEEecccC-ccCC----CCchhhcCCCCCCEEEccCCcCCCC----CCccccCCccccccccccccccCC----C
Q 008828 24 NLTNLQLVLLQNN-NISG----HIPTEIGKLSKLLTLDLSNNFFTGP----IPSTVSHLETLQYLRLNNNSLTGA----I 90 (552)
Q Consensus 24 ~l~~L~~L~l~~N-~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~ 90 (552)
+-+.|++|+|++| .|.. .+-+.+..-+.|+.|+|++|+|... +-+.+..-+.|+.|+|++|.|... +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3445555555543 4431 1223333444555555555555411 111122234555555555555421 1
Q ss_pred CccccccccccEEeccCC
Q 008828 91 PPSLSNMSQLAFLDLSYN 108 (552)
Q Consensus 91 p~~~~~l~~L~~l~l~~N 108 (552)
.+.+..-+.|+.|+|++|
T Consensus 119 a~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTTTCCCSEEECCCC
T ss_pred HHHHhhCCceeEEECCCC
Confidence 122333344555555543
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.45 E-value=0.00056 Score=67.05 Aligned_cols=155 Identities=9% Similarity=0.050 Sum_probs=85.3
Q ss_pred cCHHHHHHHhcCCCCC-----CeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccc--ccee
Q 008828 220 FHFKELQSATSNFSSK-----NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRL 292 (552)
Q Consensus 220 ~~~~e~~~~~~~~~~~-----~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~n--iv~l 292 (552)
++.+++...-..|... +.|+.|....+|+....+| .+++|+...... ...+..|..++..+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCcc
Confidence 3444555554556542 3456688889999987755 678898865211 224556777776664222 2333
Q ss_pred eeE------eecCCceeEEEeeccCCChhh--------------hhcc---C-C-C----C---CHHHHHH---------
Q 008828 293 IGF------CMTTTERLLVYPYMSNGSVAS--------------RLKA---K-P-S----L---DWATRKR--------- 331 (552)
Q Consensus 293 ~~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~---~-~-~----l---~~~~~~~--------- 331 (552)
+.. ....+..+++++|++|..+.. .++. . . + . .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 112355689999998765321 0110 0 0 0 1 1221100
Q ss_pred ---HHHHHHHHHHHHhhc----CCCceEEcCCCCCceeeCCCCceEEcccccce
Q 008828 332 ---IALGAARGLLYLHEQ----CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 378 (552)
Q Consensus 332 ---i~~~ia~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 378 (552)
+...+...+.+++.. ...+++|+|+.+.|||++++..+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001234455555532 23479999999999999987666899999875
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.40 E-value=0.00076 Score=65.46 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=44.6
Q ss_pred CCeeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccccc-eeeeEeecCCceeEEEeec-cCC
Q 008828 235 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL-RLIGFCMTTTERLLVYPYM-SNG 312 (552)
Q Consensus 235 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~niv-~l~~~~~~~~~~~lv~e~~-~~g 312 (552)
.+.|+.|....+|+. ..+++|+....... ......|..++..+....+. +++++ ..+.-++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 577888999999998 56888887643211 11234677777766533333 55554 344467899999 554
Q ss_pred Ch
Q 008828 313 SV 314 (552)
Q Consensus 313 ~L 314 (552)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 428
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.39 E-value=0.00032 Score=70.99 Aligned_cols=85 Identities=13% Similarity=0.146 Sum_probs=41.3
Q ss_pred cccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccccccCCCCccccccc
Q 008828 19 SSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMS 98 (552)
Q Consensus 19 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 98 (552)
...|.++.+|+.+.+.++..+ .-...|.++++|+.+.+. +.++......|.+|.+|+.++|.+| ++..-..+|.+|+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 344555555555555544433 334445555555555554 2333222334555555555555433 3323334555555
Q ss_pred cccEEecc
Q 008828 99 QLAFLDLS 106 (552)
Q Consensus 99 ~L~~l~l~ 106 (552)
+|+.+.+.
T Consensus 335 ~L~~i~ip 342 (394)
T 4gt6_A 335 QLERIAIP 342 (394)
T ss_dssp TCCEEEEC
T ss_pred CCCEEEEC
Confidence 55555554
No 429
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.39 E-value=0.00016 Score=73.30 Aligned_cols=86 Identities=12% Similarity=0.064 Sum_probs=65.7
Q ss_pred ccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccccccCCCCcccccccc
Q 008828 20 SSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQ 99 (552)
Q Consensus 20 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 99 (552)
..|..+.+|+.+.+.++ ++..-...|.++++|+.++|.++ ++..-..+|.+|++|+.++|..| ++..-..+|.+|++
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 46778888999888766 55455667888899999998755 66344567888899999988776 66455678888889
Q ss_pred ccEEeccCC
Q 008828 100 LAFLDLSYN 108 (552)
Q Consensus 100 L~~l~l~~N 108 (552)
|+.+++..|
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 998888654
No 430
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.37 E-value=0.00021 Score=71.85 Aligned_cols=114 Identities=12% Similarity=0.042 Sum_probs=74.5
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
++|+.+.+..+ +..+....|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|.+|++|+.+.+
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 34556666543 45555567777888888888766 44345566777888888887654 44233456777888888888
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA 119 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 119 (552)
.+|.++..-..+|.+|.+|+.+.|..+ ++.+....|.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 330 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFK 330 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhh
Confidence 777777455567777888888877654 5544444444
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.36 E-value=0.00027 Score=59.23 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=18.1
Q ss_pred CCCEEEccCCcCCCCCCccccCCcccccccccccccc
Q 008828 51 KLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLT 87 (552)
Q Consensus 51 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 87 (552)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555333333445555555555555443
No 432
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.33 E-value=0.0002 Score=72.53 Aligned_cols=106 Identities=15% Similarity=0.149 Sum_probs=83.4
Q ss_pred CCcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccc
Q 008828 1 MVLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 80 (552)
Q Consensus 1 l~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 80 (552)
+++|+.+.+.++- ..+....|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++..-..+|.+|.+|+.+.
T Consensus 264 c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 264 CAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIA 340 (394)
T ss_dssp CSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEE
Confidence 3567888887653 45666789999999999997 4565455678999999999999876 5534556799999999999
Q ss_pred cccccccCCCCccccccccccEEeccCCCC
Q 008828 81 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 110 (552)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l 110 (552)
|.++ ++..-..+|.+|++|+.+++.+|..
T Consensus 341 ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 341 IPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp ECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred ECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 9755 6645567899999999999988754
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.28 E-value=0.00081 Score=66.29 Aligned_cols=32 Identities=41% Similarity=0.375 Sum_probs=27.8
Q ss_pred CCceEEcCCCCCceeeCCC----CceEEccccccee
Q 008828 348 DPKIIHRDVKAANILLDEY----YEAVVGDFGLAKL 379 (552)
Q Consensus 348 ~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 379 (552)
.+.++|||+.+.||+++.+ +.+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3479999999999999875 6789999998864
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.27 E-value=0.0012 Score=67.64 Aligned_cols=72 Identities=15% Similarity=0.178 Sum_probs=48.8
Q ss_pred CeeeeeCceEEEEEEECC--------CcEEEEEEeccCccCchHHHHHHHHHHHhhcccccc-ceeeeEeecCCceeEEE
Q 008828 236 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLVY 306 (552)
Q Consensus 236 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~ni-v~l~~~~~~~~~~~lv~ 306 (552)
+.|+.|....||+....+ +..+++|+.... .....+..|..++..+...++ .++++.+.+ .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 467788889999998753 478999988432 111345578888887754444 566766542 3899
Q ss_pred eeccCCCh
Q 008828 307 PYMSNGSV 314 (552)
Q Consensus 307 e~~~~g~L 314 (552)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.27 E-value=0.0022 Score=62.96 Aligned_cols=138 Identities=14% Similarity=0.127 Sum_probs=79.9
Q ss_pred eeeeeCceEEEEEEECCCcEEEEEEeccCccCchHHHHHHHHHHHhhccccc--cceeeeE-----eecCCceeEEEeec
Q 008828 237 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGF-----CMTTTERLLVYPYM 309 (552)
Q Consensus 237 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~n--iv~l~~~-----~~~~~~~~lv~e~~ 309 (552)
.++ |....||+....+|+.+++|+...... ....+..|..++..+.... +.+++.. ....+..+++|+|+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 466 888899998877787899999864321 2345667888777764222 3444433 11234567899999
Q ss_pred cCCChhh-----------h---hc----cC-----CCCCHHHH----HHH---------------HHHHHHHHHHHhhc-
Q 008828 310 SNGSVAS-----------R---LK----AK-----PSLDWATR----KRI---------------ALGAARGLLYLHEQ- 346 (552)
Q Consensus 310 ~~g~L~~-----------~---l~----~~-----~~l~~~~~----~~i---------------~~~ia~~l~~LH~~- 346 (552)
+|..+.. . ++ .. ...++... ..+ ...+...+..+...
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8754321 0 11 00 11222211 001 11111223333221
Q ss_pred ---CCCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 347 ---CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 347 ---~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
....++|+|+++.||+++ + .+.|.||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234689999999999999 4 899999998753
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.24 E-value=0.0004 Score=58.22 Aligned_cols=59 Identities=22% Similarity=0.219 Sum_probs=46.4
Q ss_pred CEEEccCCcCC-CCCCccccCCccccccccccccccCCCCccccccccccEEeccCCCCCCC
Q 008828 53 LTLDLSNNFFT-GPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP 113 (552)
Q Consensus 53 ~~L~l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 113 (552)
..++.++++|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|++...
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 47888888886 34665543 4799999999999966667788999999998888887653
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.13 E-value=0.0026 Score=63.69 Aligned_cols=138 Identities=16% Similarity=0.160 Sum_probs=82.0
Q ss_pred CeeeeeCceEEEEEEEC--------CCcEEEEEEeccCccCchHHHHHHHHHHHhhccccc-cceeeeEeecCCceeEEE
Q 008828 236 NLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN-LLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 236 ~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~n-iv~l~~~~~~~~~~~lv~ 306 (552)
+.+..|-...+|+.... +++.+++|+.... ......+.+|..+++.+...+ ..++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45666888889998864 2478999986332 123445668999988775323 3466666543 3999
Q ss_pred eeccCCChhhh--------------h---ccC-----CCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 008828 307 PYMSNGSVASR--------------L---KAK-----PSLD--WATRKRIALGAAR-------------------GLLYL 343 (552)
Q Consensus 307 e~~~~g~L~~~--------------l---~~~-----~~l~--~~~~~~i~~~ia~-------------------~l~~L 343 (552)
||++|.+|... | +.- .... +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99987554311 0 111 1112 3455555544322 22333
Q ss_pred hh----c-CCCceEEcCCCCCceeeCCC----CceEEccccccee
Q 008828 344 HE----Q-CDPKIIHRDVKAANILLDEY----YEAVVGDFGLAKL 379 (552)
Q Consensus 344 H~----~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 379 (552)
.+ . ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 1 23468999999999999876 7899999998853
No 438
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.04 E-value=0.0014 Score=65.86 Aligned_cols=101 Identities=15% Similarity=0.066 Sum_probs=46.5
Q ss_pred cccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccc
Q 008828 3 LLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 82 (552)
Q Consensus 3 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 82 (552)
+|+.+.+..+ ++.+-...|.++.+|+.+.+..+ +...-...|.++++|+.+.+.+|.++..-...|.+|.+|+.+.|.
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcC
Confidence 3444444433 34433444555555555555433 322333345555555555555555542333345555555555554
Q ss_pred cccccCCCCccccccccccEEecc
Q 008828 83 NNSLTGAIPPSLSNMSQLAFLDLS 106 (552)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~l~l~ 106 (552)
++ ++..-..+|.+|++|+.+.+.
T Consensus 319 ~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 319 TA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cc-ccEEHHHHhhCCCCCCEEEEC
Confidence 33 332223445555555555443
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.03 E-value=0.0022 Score=57.86 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=63.7
Q ss_pred CChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeCCCCceEEcccccceecCCCCCceeec
Q 008828 312 GSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA 390 (552)
Q Consensus 312 g~L~~~l~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 390 (552)
-+|.++|+ .+.+++++++|.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------------
Confidence 37888887 456899999999999999998776211111 1233456889999999988753 1110
Q ss_pred ccccccccCchhhccCCCCCccchhHHHHHHHHHHh
Q 008828 391 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 426 (552)
Q Consensus 391 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~ellt 426 (552)
.....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 1223466888763 345678889999999998875
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.03 E-value=0.00056 Score=69.22 Aligned_cols=111 Identities=12% Similarity=-0.006 Sum_probs=87.3
Q ss_pred CcccEeccCCCCCcccccccccCCCCCcEEecccCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCcccccccc
Q 008828 2 VLLCYRGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 81 (552)
Q Consensus 2 ~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 81 (552)
.+|+.+.+..+. ..+....|.++..|+.+.+..+.+. ...|.++.+|+.+.+.++ ++..-..+|.+|++|+.++|
T Consensus 253 ~~l~~~~~~~~~-~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 253 TDLESISIQNNK-LRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp SSCCEEEECCTT-CEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECC
T ss_pred ccceeEEcCCCc-ceeeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEe
Confidence 567778887764 4567778999999999999887654 356889999999999876 55345567999999999999
Q ss_pred ccccccCCCCccccccccccEEeccCCCCCCCCCCccc
Q 008828 82 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA 119 (552)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 119 (552)
.++ ++..-..+|.+|++|+.+++..| ++.+....|.
T Consensus 328 p~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 363 (394)
T 4fs7_A 328 PYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQ 363 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBT
T ss_pred CCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhh
Confidence 755 76455678999999999999877 7655555555
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.94 E-value=0.0029 Score=63.32 Aligned_cols=73 Identities=10% Similarity=0.055 Sum_probs=43.8
Q ss_pred CeeeeeCceEEEEEEECC---------CcEEEEEEeccCccCchHHHHHHHHHHHhhcccccc-ceeeeEeecCCceeEE
Q 008828 236 NLVGKGGFGNVYKGYLQD---------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLV 305 (552)
Q Consensus 236 ~~iG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~ni-v~l~~~~~~~~~~~lv 305 (552)
+.++.|....+|+....+ +..+++|+...... .......|..++..+...++ .++++.. .-++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence 456778888999998754 26888888754321 11123577888877754343 3666554 23789
Q ss_pred EeeccCCCh
Q 008828 306 YPYMSNGSV 314 (552)
Q Consensus 306 ~e~~~~g~L 314 (552)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.93 E-value=0.0046 Score=63.57 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=46.8
Q ss_pred CeeeeeCceEEEEEEECC-CcEEEEEEeccCccCchHHHHHHHHHHHhhcccccc-ceeeeEeecCCceeEEEeeccCCC
Q 008828 236 NLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLVYPYMSNGS 313 (552)
Q Consensus 236 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~ 313 (552)
+.|+.|-...+|+....+ +..+++|+..... ........|..++..+...++ .++++.+. -.+||||+++.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~~gl~P~ll~~~~----~G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYNKNIAKKIYVFFT----NGRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTTSSSBCCEEEEET----TEEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC----CeEEEEeeCCcc
Confidence 467888889999998765 4788899874322 111122478888887764444 46677663 235999998754
Q ss_pred h
Q 008828 314 V 314 (552)
Q Consensus 314 L 314 (552)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.58 E-value=0.02 Score=56.40 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=28.1
Q ss_pred CCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 348 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 348 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
...++|+|+.+.||+++.++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34799999999999999888899999987764
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.42 E-value=0.00056 Score=61.39 Aligned_cols=108 Identities=16% Similarity=0.165 Sum_probs=64.9
Q ss_pred CcccEeccCCC-CCccc----ccccccCCCCCcEEecccCccCC----CCchhhcCCCCCCEEEccCCcCCCC----CCc
Q 008828 2 VLLCYRGAPSQ-NLSGT----LSSSIGNLTNLQLVLLQNNNISG----HIPTEIGKLSKLLTLDLSNNFFTGP----IPS 68 (552)
Q Consensus 2 ~~l~~L~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~p~ 68 (552)
+.|+.|+|++| +|... +-..+..-++|+.|+|++|.|.. .+.+.+..-+.|+.|+|++|.|... +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 35778888875 55432 33456666778888888888862 2344455567788888888887622 112
Q ss_pred cccCCccccccccccccc---cCC----CCccccccccccEEeccCCC
Q 008828 69 TVSHLETLQYLRLNNNSL---TGA----IPPSLSNMSQLAFLDLSYNN 109 (552)
Q Consensus 69 ~~~~l~~L~~L~l~~N~l---~~~----~p~~~~~l~~L~~l~l~~N~ 109 (552)
.+..-+.|+.|+|++|.. ... +...+..-+.|+.|+++.|.
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 344446688888876533 211 22334444567777766543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.03 E-value=0.032 Score=56.02 Aligned_cols=139 Identities=16% Similarity=0.140 Sum_probs=80.4
Q ss_pred CeeeeeCceEEEEEEECC--------CcEEEEEEeccCcc-----------CchH------HHHHHHHHHHhhccccc-c
Q 008828 236 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNA-----------IGGE------IQFQTEVEMISLAVHRN-L 289 (552)
Q Consensus 236 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-----------~~~~------~~~~~e~~~l~~~~h~n-i 289 (552)
+.|..|-...+|+....+ +..|.+++.-.... ++.+ .....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 356668888999988753 36788888743221 1111 12234888888775333 4
Q ss_pred ceeeeEeecCCceeEEEeeccCCChhh--h------------h---ccC-----CCCC--HHHHHHHHHHHH--------
Q 008828 290 LRLIGFCMTTTERLLVYPYMSNGSVAS--R------------L---KAK-----PSLD--WATRKRIALGAA-------- 337 (552)
Q Consensus 290 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~------------l---~~~-----~~l~--~~~~~~i~~~ia-------- 337 (552)
.++++++.. .+|+||+++-+|.. . + +.. .... +..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566777643 28999998754421 1 0 111 1122 234444443321
Q ss_pred --------------HHHH----HHhhc-CCCceEEcCCCCCceeeCCC------CceEEcccccce
Q 008828 338 --------------RGLL----YLHEQ-CDPKIIHRDVKAANILLDEY------YEAVVGDFGLAK 378 (552)
Q Consensus 338 --------------~~l~----~LH~~-~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~~~ 378 (552)
.-+. +|... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 23468899999999999877 789999999875
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=95.94 E-value=0.0064 Score=39.30 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=21.2
Q ss_pred eeeehhhhHHHHHHHHHHHHhhhhhcccccc
Q 008828 169 ALALGSSLGCISLLILGFGFLLWWRQRHNQQ 199 (552)
Q Consensus 169 ~i~v~~~~~~v~l~il~~~~~~~~r~~~~~~ 199 (552)
.++.+++.|+++++++++++++++|+|+.++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 4556666667777777777777777776543
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=95.33 E-value=0.0072 Score=38.95 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=20.3
Q ss_pred eeeehhhhHHHHHHHHHHHHhhhhhcccccc
Q 008828 169 ALALGSSLGCISLLILGFGFLLWWRQRHNQQ 199 (552)
Q Consensus 169 ~i~v~~~~~~v~l~il~~~~~~~~r~~~~~~ 199 (552)
.++.+++.|+++++++++.+++|||+|+.++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3555566667776777777777777776553
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=95.29 E-value=0.0082 Score=38.59 Aligned_cols=30 Identities=17% Similarity=0.427 Sum_probs=19.9
Q ss_pred eeeehhhhHHHHHHHHHHHHhhhhhccccc
Q 008828 169 ALALGSSLGCISLLILGFGFLLWWRQRHNQ 198 (552)
Q Consensus 169 ~i~v~~~~~~v~l~il~~~~~~~~r~~~~~ 198 (552)
..+++.++|+++++++++++++|+|||+.+
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 345566666666667777777777777654
No 449
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.00 E-value=0.075 Score=53.81 Aligned_cols=137 Identities=9% Similarity=0.083 Sum_probs=81.8
Q ss_pred CeeeeeCceEEEEEEECC--------CcEEEEEEeccCccCchHHHHHHHHHHHhhccccc-cceeeeEeecCCceeEEE
Q 008828 236 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN-LLRLIGFCMTTTERLLVY 306 (552)
Q Consensus 236 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~n-iv~l~~~~~~~~~~~lv~ 306 (552)
+.+..|-...+|+....+ +..+++|+..... .......+|..+++.+...+ ..++++.+. -++||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 456668888999998753 5789999874432 11122357888887775333 345555432 37899
Q ss_pred eeccCCChhh-------h-------h---c---c---------C-CCCCHHHHHHHHHHH-------------------H
Q 008828 307 PYMSNGSVAS-------R-------L---K---A---------K-PSLDWATRKRIALGA-------------------A 337 (552)
Q Consensus 307 e~~~~g~L~~-------~-------l---~---~---------~-~~l~~~~~~~i~~~i-------------------a 337 (552)
||++|.+|.. . + + . . .+.-+.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999865421 0 0 0 0 0 111234444443322 1
Q ss_pred HHHHHHhh---------------------cCCCceEEcCCCCCceeeCCCCceEEccccccee
Q 008828 338 RGLLYLHE---------------------QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 379 (552)
Q Consensus 338 ~~l~~LH~---------------------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 379 (552)
..+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22333321 11236899999999999 8888999999998853
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.40 E-value=1 Score=45.06 Aligned_cols=30 Identities=30% Similarity=0.427 Sum_probs=25.2
Q ss_pred ceEEcCCCCCceee------CCCCceEEccccccee
Q 008828 350 KIIHRDVKAANILL------DEYYEAVVGDFGLAKL 379 (552)
Q Consensus 350 ~ivH~dlk~~Nill------~~~~~~kl~Dfg~~~~ 379 (552)
.++|+|+.+.|||+ +++..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999998853
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.06 E-value=0.78 Score=41.27 Aligned_cols=116 Identities=10% Similarity=0.057 Sum_probs=78.8
Q ss_pred cccccceeeeEeecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcCCCCCceeeC
Q 008828 285 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD 364 (552)
Q Consensus 285 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 364 (552)
.||+.+.. .+-...+...+.++.-+.+.=+..++ .++...+++++.+|+....+++.. +|--|.|+|++++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik---~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~ 113 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK---SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFT 113 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG---GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEEC
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH---hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEc
Confidence 48888765 45555666666666544222222232 478899999999999988777654 7889999999999
Q ss_pred CCCceEEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccc
Q 008828 365 EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 432 (552)
Q Consensus 365 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~ 432 (552)
.++.+++.-.|+...+.+.. .+...=.-.+=+++..+++++..|+
T Consensus 114 ~~~~p~i~~RGik~~l~P~~-----------------------~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 114 RDGLPIAKTRGLQNVVDPLP-----------------------VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp TTSCEEESCCEETTTBSCCC-----------------------CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCEEEEEccCccCCCCCC-----------------------CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999998887754332110 1111113356778888999988886
No 452
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=88.50 E-value=0.14 Score=32.74 Aligned_cols=28 Identities=29% Similarity=0.383 Sum_probs=14.0
Q ss_pred eeeeehhhhHHHHHHHHHHHHhhhhhcc
Q 008828 168 IALALGSSLGCISLLILGFGFLLWWRQR 195 (552)
Q Consensus 168 ~~i~v~~~~~~v~l~il~~~~~~~~r~~ 195 (552)
..++.+++.|+++++++.+.++++|||+
T Consensus 13 ~~I~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 13 LAVIGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred EEEEeehhHHHHHHHHHHHHheeEeeec
Confidence 3445555555555442444445555543
No 453
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=86.80 E-value=0.083 Score=32.02 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=15.8
Q ss_pred eehhhhHHHHHHHHHHHHhhhhhccc
Q 008828 171 ALGSSLGCISLLILGFGFLLWWRQRH 196 (552)
Q Consensus 171 ~v~~~~~~v~l~il~~~~~~~~r~~~ 196 (552)
+.+.++|++++++++.++.+++|||+
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr~ 35 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRRR 35 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHCC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeecC
Confidence 33444555556666677777777664
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.54 E-value=2 Score=38.66 Aligned_cols=115 Identities=14% Similarity=0.064 Sum_probs=77.3
Q ss_pred cccccceeeeEeecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCceEEcCCCCCceee
Q 008828 285 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLL-YLHEQCDPKIIHRDVKAANILL 363 (552)
Q Consensus 285 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~dlk~~Nill 363 (552)
.||++ -..+-...+...+.++.-+++.=...+ ..++...+++++.+|+.... +++.. +|--|.|+|+++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i---~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f 117 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI---RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMF 117 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH---HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH---HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEE
Confidence 47877 444446667777777665443333333 24788999999999988777 66654 788999999999
Q ss_pred CCCCceEEcccccceecCCCCCceeecccccccccCchhhccCCCCCccchhHHHHHHHHHHhCCCccc
Q 008828 364 DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 432 (552)
Q Consensus 364 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~elltg~~p~~ 432 (552)
+.++.+++.-.|+-..+.+.. +.+|- =.-.+=+++..++.++..|+
T Consensus 118 ~~~~~p~i~hRGi~~~lpP~e-------------~~ee~----------fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 118 NRALEPFFLHVGVKESLPPDE-------------WDDER----------LLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CTTCCEEESCCEETTTBSSCS-------------CCHHH----------HHHHHHHHHHHHTTCSSCHH
T ss_pred eCCCcEEEEEcCCcccCCCCC-------------CCHHH----------HHHHHHHHHHHHHcCCCCHH
Confidence 999999998888754332111 11111 12346677888888877775
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.76 E-value=0.14 Score=52.57 Aligned_cols=61 Identities=7% Similarity=-0.014 Sum_probs=17.9
Q ss_pred CCCeeeeeCceEEEEEEECC-CcEEEE------EEeccCccC-chHHHHHHHHHHHhhccccccceeeeEee
Q 008828 234 SKNLVGKGGFGNVYKGYLQD-GTVVAV------KRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCM 297 (552)
Q Consensus 234 ~~~~iG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~~~~~ 297 (552)
+.+.|| ||.||+|.+.. ..+||+ |..+..... +....|.+|..++...+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 446676 99999999864 467888 766543322 22345788888888889999999988754
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=80.30 E-value=1 Score=28.07 Aligned_cols=24 Identities=13% Similarity=-0.038 Sum_probs=10.1
Q ss_pred eehhhhHHHHHHH-HHHHHhhhhhc
Q 008828 171 ALGSSLGCISLLI-LGFGFLLWWRQ 194 (552)
Q Consensus 171 ~v~~~~~~v~l~i-l~~~~~~~~r~ 194 (552)
+.+++++.++.++ +++..+++|||
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeeeehHHHHHHHHHHHHHHHHeec
Confidence 3455555544332 22333444444
No 457
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=72.80 E-value=2 Score=25.51 Aligned_cols=26 Identities=31% Similarity=0.599 Sum_probs=15.2
Q ss_pred eehhhhHHHHHHHHHHHHhhhhhccc
Q 008828 171 ALGSSLGCISLLILGFGFLLWWRQRH 196 (552)
Q Consensus 171 ~v~~~~~~v~l~il~~~~~~~~r~~~ 196 (552)
++..++|.+++..+....|++||-|+
T Consensus 9 alt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 9 ALTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCceeEEEcccc
Confidence 34455666666555556666776443
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=71.91 E-value=7.7 Score=30.03 Aligned_cols=16 Identities=19% Similarity=0.131 Sum_probs=6.5
Q ss_pred ccccCCCCCcEEeccc
Q 008828 20 SSIGNLTNLQLVLLQN 35 (552)
Q Consensus 20 ~~~~~l~~L~~L~l~~ 35 (552)
..|.++++|+.+.|..
T Consensus 14 ~aF~~c~~L~~i~iP~ 29 (100)
T 2lz0_A 14 SLFAGNTVIREITVQP 29 (100)
T ss_dssp CTTTTCTTCCCEEECT
T ss_pred HHhcCCCCCcEEEcCC
Confidence 3344444444444433
No 459
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=73.74 E-value=0.84 Score=28.08 Aligned_cols=29 Identities=7% Similarity=0.178 Sum_probs=15.6
Q ss_pred eeeeehhhhHHHHHHHHHHHHhhhhhccc
Q 008828 168 IALALGSSLGCISLLILGFGFLLWWRQRH 196 (552)
Q Consensus 168 ~~i~v~~~~~~v~l~il~~~~~~~~r~~~ 196 (552)
+.++.++.+.++++++..+++++.|+|+.
T Consensus 8 ~~vl~avlal~vi~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 8 VVVISAILALVVLTIISLIILIMLWQKKP 36 (39)
Confidence 33444444444444555556666677664
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=70.72 E-value=5.2 Score=31.01 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=39.0
Q ss_pred cCccCCCCchhhcCCCCCCEEEccCCcCCCCCCccccCCccccccccccc
Q 008828 35 NNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNN 84 (552)
Q Consensus 35 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 84 (552)
+..++.+-...|.+|++|+.+.|..+--+ .-...|.+|.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~v~~-Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPNIGL-LYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTTSSC-CCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCchhe-EcHHHHhccCCccEEEEcCC
Confidence 34566566778999999999999987433 56678999999999998664
No 461
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=52.81 E-value=8.8 Score=22.91 Aligned_cols=24 Identities=17% Similarity=0.140 Sum_probs=13.7
Q ss_pred eehhhhHHHHHHHHHHHHhhhhhc
Q 008828 171 ALGSSLGCISLLILGFGFLLWWRQ 194 (552)
Q Consensus 171 ~v~~~~~~v~l~il~~~~~~~~r~ 194 (552)
+.|++++.+...++.+..++||+|
T Consensus 9 IaGIVvgdi~~t~~i~~~vy~~~r 32 (33)
T 2l34_A 9 LAGIVVGDLVLTVLIALAVYFLGR 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEeEeHHHHHHHHHHHHHHhheec
Confidence 445566666655555555666654
No 462
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=48.53 E-value=11 Score=25.31 Aligned_cols=15 Identities=27% Similarity=0.275 Sum_probs=6.9
Q ss_pred eeeeehhhhHHHHHH
Q 008828 168 IALALGSSLGCISLL 182 (552)
Q Consensus 168 ~~i~v~~~~~~v~l~ 182 (552)
.+++++++++.++++
T Consensus 9 ~WiIi~svl~GLLLL 23 (54)
T 2l8s_A 9 LWVILLSAFAGLLLL 23 (54)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 445455444444433
No 463
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=45.63 E-value=11 Score=26.30 Aligned_cols=10 Identities=30% Similarity=0.491 Sum_probs=3.9
Q ss_pred eehhhhHHHH
Q 008828 171 ALGSSLGCIS 180 (552)
Q Consensus 171 ~v~~~~~~v~ 180 (552)
++|.++++++
T Consensus 13 vlGg~~~lll 22 (70)
T 2klu_A 13 VLGGVAGLLL 22 (70)
T ss_dssp HHHHHHHHHH
T ss_pred HHhHHHHHHH
Confidence 3444443333
No 464
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=37.08 E-value=25 Score=22.52 Aligned_cols=31 Identities=10% Similarity=-0.134 Sum_probs=20.1
Q ss_pred eeeeeehhhhHHHHHHHHHHHHhhhhhcccc
Q 008828 167 KIALALGSSLGCISLLILGFGFLLWWRQRHN 197 (552)
Q Consensus 167 ~~~i~v~~~~~~v~l~il~~~~~~~~r~~~~ 197 (552)
..+-+++.++++++++++.++++-.++++++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 4455566666666666777777777776654
No 465
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=35.13 E-value=19 Score=22.99 Aligned_cols=31 Identities=16% Similarity=0.065 Sum_probs=21.7
Q ss_pred eeeeeehhhhHHHHHHHHHHHHhhhhhccccc
Q 008828 167 KIALALGSSLGCISLLILGFGFLLWWRQRHNQ 198 (552)
Q Consensus 167 ~~~i~v~~~~~~v~l~il~~~~~~~~r~~~~~ 198 (552)
..+.++| ++.++++.+..++++-.+|+++++
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~~~~kK 44 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQQKIRK 44 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHCSCCCC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhhhhccC
Confidence 3344445 778888888888888888877653
No 466
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=29.92 E-value=32 Score=23.06 Aligned_cols=14 Identities=36% Similarity=0.316 Sum_probs=6.3
Q ss_pred eeeeehhhhHHHHH
Q 008828 168 IALALGSSLGCISL 181 (552)
Q Consensus 168 ~~i~v~~~~~~v~l 181 (552)
.+++++++++.+++
T Consensus 12 ~wiIi~svl~GLll 25 (54)
T 2knc_A 12 IWWVLVGVLGGLLL 25 (54)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 34444444444443
No 467
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=24.04 E-value=1.7e+02 Score=27.91 Aligned_cols=75 Identities=16% Similarity=0.084 Sum_probs=42.1
Q ss_pred ceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHH--HHHHHHHhhcCCCc-eE-EcCCCCCceeeCCCCc-eEEcc
Q 008828 301 ERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGA--ARGLLYLHEQCDPK-II-HRDVKAANILLDEYYE-AVVGD 373 (552)
Q Consensus 301 ~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i--a~~l~~LH~~~~~~-iv-H~dlk~~Nill~~~~~-~kl~D 373 (552)
..+++|+|.+|..|.+.-... ..+.. +.+.++ +-++..+..+.++- .+ +.--.+.|||+++++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 456999999876665432210 11222 223333 23455555554432 11 1225788999986554 88899
Q ss_pred ccccee
Q 008828 374 FGLAKL 379 (552)
Q Consensus 374 fg~~~~ 379 (552)
-+.+..
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 998854
Done!