Query 008834
Match_columns 551
No_of_seqs 194 out of 531
Neff 7.5
Searched_HMMs 46136
Date Thu Mar 28 17:10:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008834.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008834hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03662 Glyco_hydro_79n: Glyc 100.0 1.2E-82 2.5E-87 642.2 -1.0 318 25-351 2-319 (319)
2 COG3534 AbfA Alpha-L-arabinofu 100.0 3.4E-39 7.4E-44 329.1 28.3 427 25-542 3-499 (501)
3 PF01229 Glyco_hydro_39: Glyco 99.2 8.9E-10 1.9E-14 120.6 19.5 312 83-431 42-391 (486)
4 PF11790 Glyco_hydro_cc: Glyco 98.7 1.8E-07 3.9E-12 93.1 12.1 129 194-351 63-202 (239)
5 smart00813 Alpha-L-AF_C Alpha- 98.5 2.1E-06 4.6E-11 82.3 14.1 120 323-444 1-138 (189)
6 PF02055 Glyco_hydro_30: O-Gly 98.3 6.3E-05 1.4E-09 82.3 21.8 235 183-444 207-473 (496)
7 PF00150 Cellulase: Cellulase 98.2 3.4E-05 7.3E-10 77.8 16.1 217 83-332 23-251 (281)
8 PF06964 Alpha-L-AF_C: Alpha-L 98.2 8.4E-06 1.8E-10 77.3 10.7 102 333-444 17-126 (177)
9 PF12891 Glyco_hydro_44: Glyco 98.1 9.8E-06 2.1E-10 79.2 7.9 96 180-279 103-237 (239)
10 PF07745 Glyco_hydro_53: Glyco 98.0 0.00025 5.4E-09 73.5 17.0 196 82-330 25-242 (332)
11 COG5520 O-Glycosyl hydrolase [ 97.7 0.0029 6.2E-08 64.7 18.1 211 185-434 157-375 (433)
12 PF12876 Cellulase-like: Sugar 97.6 0.00015 3.2E-09 60.7 5.7 74 195-277 9-88 (88)
13 COG3867 Arabinogalactan endo-1 97.2 0.063 1.4E-06 53.9 19.7 218 75-329 55-287 (403)
14 smart00633 Glyco_10 Glycosyl h 96.5 0.69 1.5E-05 46.3 21.5 66 136-209 12-86 (254)
15 COG3664 XynB Beta-xylosidase [ 95.8 0.084 1.8E-06 55.4 11.2 181 197-401 105-300 (428)
16 PF14587 Glyco_hydr_30_2: O-Gl 95.4 0.12 2.6E-06 54.4 10.7 169 140-328 106-311 (384)
17 PRK10150 beta-D-glucuronidase; 95.3 0.29 6.4E-06 55.4 14.6 66 197-279 409-474 (604)
18 PF02836 Glyco_hydro_2_C: Glyc 93.6 1.2 2.7E-05 45.5 13.3 101 87-238 42-151 (298)
19 PF00332 Glyco_hydro_17: Glyco 91.4 1.3 2.8E-05 45.9 9.9 197 82-332 14-242 (310)
20 COG5309 Exo-beta-1,3-glucanase 82.2 25 0.00054 35.4 12.2 78 143-235 90-168 (305)
21 PF03198 Glyco_hydro_72: Gluca 80.6 51 0.0011 34.0 14.3 127 143-279 82-216 (314)
22 TIGR03356 BGL beta-galactosida 67.0 14 0.00031 40.0 6.9 103 85-209 58-165 (427)
23 PF14488 DUF4434: Domain of un 61.9 26 0.00056 32.8 6.7 94 140-248 65-161 (166)
24 KOG2566 Beta-glucocerebrosidas 59.8 2.4E+02 0.0053 30.1 16.1 55 379-434 432-488 (518)
25 PF02449 Glyco_hydro_42: Beta- 55.2 73 0.0016 33.7 9.6 56 86-163 15-70 (374)
26 COG4130 Predicted sugar epimer 52.8 2.4E+02 0.0051 27.8 11.8 106 143-266 52-165 (272)
27 PF02057 Glyco_hydro_59: Glyco 51.4 2.5E+02 0.0054 32.2 13.1 184 191-428 168-369 (669)
28 PF02449 Glyco_hydro_42: Beta- 51.1 61 0.0013 34.3 8.2 79 310-389 281-365 (374)
29 KOG4701 Chitinase [Cell wall/m 46.4 3.4E+02 0.0073 28.9 12.1 44 139-190 89-132 (568)
30 PRK15014 6-phospho-beta-glucos 45.6 51 0.0011 36.3 6.7 102 87-208 75-181 (477)
31 PRK09525 lacZ beta-D-galactosi 44.3 1.1E+02 0.0023 37.3 9.6 82 143-238 397-482 (1027)
32 PRK10340 ebgA cryptic beta-D-g 40.8 97 0.0021 37.6 8.6 81 143-238 381-469 (1021)
33 PRK09852 cryptic 6-phospho-bet 39.2 66 0.0014 35.4 6.3 103 87-209 77-184 (474)
34 PF02806 Alpha-amylase_C: Alph 38.7 36 0.00078 28.1 3.4 15 527-541 79-93 (95)
35 PLN02849 beta-glucosidase 36.4 71 0.0015 35.5 6.1 68 140-209 119-191 (503)
36 PRK09589 celA 6-phospho-beta-g 35.2 78 0.0017 34.9 6.1 103 87-209 73-180 (476)
37 PRK13511 6-phospho-beta-galact 34.1 86 0.0019 34.5 6.2 100 87-209 60-164 (469)
38 KOG0564 5,10-methylenetetrahyd 32.8 1.2E+02 0.0027 33.2 6.8 129 41-203 14-151 (590)
39 PLN02814 beta-glucosidase 32.7 84 0.0018 34.9 5.9 102 87-209 83-189 (504)
40 smart00632 Aamy_C Aamy_C domai 31.4 2.7E+02 0.0058 22.3 7.3 20 412-434 10-29 (81)
41 PRK09593 arb 6-phospho-beta-gl 30.2 1.2E+02 0.0026 33.5 6.5 68 140-209 114-186 (478)
42 TIGR01233 lacG 6-phospho-beta- 29.3 1.2E+02 0.0025 33.5 6.2 100 87-209 59-163 (467)
43 PLN02998 beta-glucosidase 29.2 97 0.0021 34.4 5.6 68 140-209 122-194 (497)
44 COG3250 LacZ Beta-galactosidas 28.8 1.2E+02 0.0026 35.8 6.5 60 143-208 347-409 (808)
45 PF00232 Glyco_hydro_1: Glycos 27.5 73 0.0016 34.8 4.3 99 87-209 64-170 (455)
46 PF10566 Glyco_hydro_97: Glyco 26.9 1.1E+02 0.0024 31.0 5.2 65 136-201 28-93 (273)
47 PF07417 Crl: Transcriptional 25.0 54 0.0012 29.0 2.2 30 82-112 6-35 (125)
48 PF00331 Glyco_hydro_10: Glyco 24.7 7.8E+02 0.017 25.4 18.1 221 137-389 56-317 (320)
49 PRK10984 DNA-binding transcrip 23.8 65 0.0014 28.7 2.4 31 81-112 7-37 (127)
50 cd02877 GH18_hevamine_XipI_cla 23.5 7.9E+02 0.017 25.0 11.1 42 141-190 60-101 (280)
51 PF14488 DUF4434: Domain of un 22.7 2.8E+02 0.0061 25.8 6.7 65 136-203 16-86 (166)
52 COG2723 BglB Beta-glucosidase/ 21.1 2.4E+02 0.0053 30.8 6.6 106 84-209 62-172 (460)
53 COG4124 ManB Beta-mannanase [C 20.8 6.1E+02 0.013 26.8 9.1 116 196-329 181-299 (355)
No 1
>PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A.
Probab=100.00 E-value=1.2e-82 Score=642.20 Aligned_cols=318 Identities=55% Similarity=1.066 Sum_probs=156.1
Q ss_pred eEEEEecCCCcccccCCCeeEEEeeccCCCCCCCCCCCCCCCccchhcccccccccCCcHHHHHHHHHcCCceEecCCcc
Q 008834 25 RVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLLHAIWYFQDLSHPLLANAIQAFQSLRIRIGGSL 104 (551)
Q Consensus 25 ~~~v~v~~~~~~~~i~~~f~g~sie~wp~~~~~y~~~~wg~~s~~nl~~~g~~~~dl~~~~L~~l~k~L~p~~LRiGG~~ 104 (551)
.++|.|+.+.+++++|++|+|+|+||||++||+|++|+||++|++|+ ||+|++|++++|+|+|.+||+||+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~f~catldwwp~~kc~y~~~~w~~as~~nl--------DL~n~~L~~a~~al~P~~iRvGGsl 73 (319)
T PF03662_consen 2 DGTVVVDGSTAIATTDENFVCATLDWWPPSKCDYGQCSWGNASILNL--------DLSNPILINAAKALSPLYIRVGGSL 73 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccccccccccccc
Confidence 56889999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCChHHHH
Q 008834 105 QDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNAR 184 (551)
Q Consensus 105 ~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~ 184 (551)
||+++|+.+....||.|+.++++.+|||+++|+++++||++++||+++|+++|||||++.|++...++.+.|+||++||+
T Consensus 74 qD~v~Y~~~~~~~~c~~~~~~~~~~~~fs~~clt~~rwd~l~~F~~~tG~~liFgLNAL~g~~~~~~~~~~g~WnssNA~ 153 (319)
T PF03662_consen 74 QDQVIYDTGDNKQPCSPFVKNASGLFGFSNGCLTMSRWDELNNFAQKTGLKLIFGLNALLGRRQLADRDWDGSWNSSNAQ 153 (319)
T ss_dssp --------------------------------------HHHHHHHHHHT-EEEEEE-TTTS-HHHHHHHHHHHHHHH-TT
T ss_pred cccccccccccccccccccccccccccccccccchhHHHHHHHHHHHhCCEEEEEecccCCCCCCCCCCcCCCCChHHHH
Confidence 99999999988889999888889999999999999999999999999999999999999997544444566899999999
Q ss_pred HHHHHHHHcCcccceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCCHHHHHHHHhhh
Q 008834 185 DFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVS 264 (551)
Q Consensus 185 ~~l~y~~~~g~~i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~~~~w~~~fl~~~ 264 (551)
++|+|+.++||+|++|||||||+++ +.+.+++|+||++|+.+||++|+++|++..++|+++||+++++.+|+++||+++
T Consensus 154 ~Ll~Yt~skgy~I~~WELGNEl~g~-g~~~~v~a~qyakD~~~Lr~il~~iy~~~~~~P~v~gP~~~~d~~w~~~FL~~~ 232 (319)
T PF03662_consen 154 SLLKYTASKGYNIDSWELGNELNGS-GVGASVSAEQYAKDFIQLRKILNEIYKNALPGPLVVGPGGFFDADWLKEFLKAS 232 (319)
T ss_dssp TEEEEEESS-GGG--------HHHH-SSSTT--HHHHHHHH---HHHHHHHHHH-TT---EEEEEESS-GGGHHHHHHHT
T ss_pred HHHHHHHHcCCCccccccccccCCC-CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCCeEECCCCCCCHHHHHHHHHhc
Confidence 9999999999999999999999996 788999999999999999999999998877889999999988999999999998
Q ss_pred CCCCcCEEEEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccccCCCCCCcchHHHHHH
Q 008834 265 GSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSF 344 (551)
Q Consensus 265 g~~~id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~~G~~~vsdtf~~al 344 (551)
++..||+||||+|++++|+|++++++|++|++||.+..+++.+++++++++|++++|||||++||++|+++|||||+++|
T Consensus 233 g~~~vD~vT~H~Y~lg~g~d~~l~~~~l~p~~Ld~~~~~~~~~~~~v~~~~p~~~~WlGEtg~Ay~gG~~~vSdtFv~~F 312 (319)
T PF03662_consen 233 GPGVVDAVTWHHYNLGSGRDPALIEDFLNPSYLDTLADTFQKLQQVVQEYGPGKPVWLGETGSAYNGGAPGVSDTFVAGF 312 (319)
T ss_dssp TTT--SEEEEEEEEE--TT-TT-HHHHTS--HHHHHHHHHHHHH-----HHH---EEEEEEEEESTT--TTTTTSTHHHH
T ss_pred CCCccCEEEEEecCCCCCchHHHHHHhcChhhhhHHHHHHHHHhhhhcccCCCCCeEEeCcccccCCCCCCccHHHHHHH
Confidence 87569999999999988888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 008834 345 WYLDQLG 351 (551)
Q Consensus 345 w~lD~Lg 351 (551)
||||+||
T Consensus 313 wwLDqLG 319 (319)
T PF03662_consen 313 WWLDQLG 319 (319)
T ss_dssp HHHHHH-
T ss_pred HHHHhhC
Confidence 9999997
No 2
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-39 Score=329.12 Aligned_cols=427 Identities=17% Similarity=0.193 Sum_probs=294.6
Q ss_pred eEEEEecCCCcccccCCCeeEEEeeccCCCCCCCCCCCCCCCccchhcccccccccCCcHHHHHHHHHcCCceEec-CCc
Q 008834 25 RVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLLHAIWYFQDLSHPLLANAIQAFQSLRIRI-GGS 103 (551)
Q Consensus 25 ~~~v~v~~~~~~~~i~~~f~g~sie~wp~~~~~y~~~~wg~~s~~nl~~~g~~~~dl~~~~L~~l~k~L~p~~LRi-GG~ 103 (551)
..+++|+++..++.||.+++|.++| |.+||+|.|++.+..-+++ .+|+ +.+++.++|.|.+|+||+ |||
T Consensus 3 ~a~~~v~~d~~ig~I~k~iYG~F~E--HlGr~vY~Giyepd~p~~d--~~G~------RkDVle~lk~Lk~P~lR~PGGn 72 (501)
T COG3534 3 KARAVVDTDYTIGKIDKRIYGHFIE--HLGRAVYEGIYEPDSPIAD--ERGF------RKDVLEALKDLKIPVLRWPGGN 72 (501)
T ss_pred ccceeechhhccCcchhhhhhHHHH--hhccceeeeeecCCCCCcc--hhhh------HHHHHHHHHhcCCceeecCCcc
Confidence 4567899999999999999999999 9999999999988443333 3453 578999999999999995 999
Q ss_pred ccceeeEecCCCCCCCCCCc------cCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCC
Q 008834 104 LQDQVLYDVGDLKAPCHPFR------KMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGA 177 (551)
Q Consensus 104 ~~D~~~~~~~~~~~~~~p~~------~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~ 177 (551)
+.|.|+|.++.++...+|.+ ..|++.||+ ++|++||+.+|+++++.+|++++
T Consensus 73 Fvs~Y~WeDGIGP~e~Rp~rldlaW~t~EtN~~Gt----------~EF~~~~e~iGaep~~avN~Gsr------------ 130 (501)
T COG3534 73 FVSGYHWEDGIGPREERPRRLDLAWGTTETNEFGT----------HEFMDWCELIGAEPYIAVNLGSR------------ 130 (501)
T ss_pred cccccccccCcCchhhCchhhcccccccccccccH----------HHHHHHHHHhCCceEEEEecCCc------------
Confidence 99999999998866556653 248889998 99999999999999999999987
Q ss_pred CChHHHHHHHHHHH----------------HcCcccceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 008834 178 WDSNNARDFLKYTI----------------SMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSS 241 (551)
Q Consensus 178 W~~~~A~~~l~y~~----------------~~g~~i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~ 241 (551)
...+|++|++||. +++++|++|.||||+|+.|++|+ .++.+|++-..+++++++-+.|.+
T Consensus 131 -gvd~ar~~vEY~n~pggtywsdlR~~~G~~~P~nvK~w~lGNEm~GpWq~G~-~~a~EY~~~A~e~~k~~k~~d~t~-- 206 (501)
T COG3534 131 -GVDEARNWVEYCNHPGGTYWSDLRRENGREEPWNVKYWGLGNEMDGPWQCGH-KTAPEYGRLANEYRKYMKYFDPTI-- 206 (501)
T ss_pred -cHHHHHHHHHHccCCCCChhHHHHHhcCCCCCcccceEEeccccCCCccccc-ccCHHHHHHHHHHHHHHhhcCccc--
Confidence 4789999999984 24578999999999999999987 577888888888888888776664
Q ss_pred CCeEEccCC---CCCHHHHHHHHhhhCCCCcCEEEEeEcCCCCCCCc-chhhccCChhHHHHHHHHHHHHHHHH-HHhCC
Q 008834 242 KPTILAPGG---FFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDP-NLVSKILNPQRLSRVSETFGNLKQTI-EKHGP 316 (551)
Q Consensus 242 ~~~~vgp~~---~~~~~w~~~fl~~~g~~~id~vS~H~Y~~~~g~d~-~~~~~~l~~~~l~~~~~~~~~~~~~~-~~~~~ 316 (551)
+..+.|.++ ..++.|.+.+|+++.+. +|++|+|+|..+...+. .-...-+. ++.....+......+ ++..+
T Consensus 207 e~~v~g~a~~~n~~~~~W~~~vl~~~~e~-vD~ISlH~Y~Gn~~~~t~ny~~~~~~---~~~~i~~l~~~~d~Vk~k~r~ 282 (501)
T COG3534 207 ENVVCGSANGANPTDPNWEAVVLEEAYER-VDYISLHYYKGNATDDTPNYWAKSLK---LDRYIDDLIKKIDYVKAKKRS 282 (501)
T ss_pred cceEEeecCCCCCCchHHHHHHHHHHhhh-cCeEEEEEecCccccCcHHHHHHHhh---hhHHHHHHHHHHHHHHhcccc
Confidence 233444322 24679999999988884 99999999964322111 11111111 111111111112222 23333
Q ss_pred C--CcEEEeccccccCCC------------------CCCcchHHHHHHHHHHHhhhhhccCCeE--EEe-eeccCCcc-c
Q 008834 317 W--ASAWVGESGGAYNSG------------------GRHVSNTFVNSFWYLDQLGMSSKYNTKV--YCR-QTLVGGNY-G 372 (551)
Q Consensus 317 ~--~~~wl~Et~sa~~~G------------------~~~vsdtf~~alw~lD~Lg~aA~~g~~v--v~~-qtl~Gg~Y-~ 372 (551)
. ..+-+.|+|.+|..- ..++.|+..+|.. |....++.-.| .|. |. +. -- .
T Consensus 283 kk~v~l~fDEWnvWy~~~~~d~~~~~w~~~p~~Le~~ytl~Dal~~g~~----l~~f~k~sdrV~iAniAQl-VN-vi~a 356 (501)
T COG3534 283 KKRVGLSFDEWNVWYHVRKEDLDRIPWGTAPGLLEQIYTLEDALFAGSL----LNIFHKHSDRVRIANIAQL-VN-VLAA 356 (501)
T ss_pred ccceeEEEecccceeecchhhhccccCCCCCccccccchHHHHHHHHHH----HHHHHhhcceeehhHHHHH-HH-Hhhh
Confidence 3 346788999887541 1134455444433 33333333222 221 21 00 00 0
Q ss_pred -cccC-CCCccCcchHHHHHHHHhcCCceEEeecCCC----------CceEEEEEEeeCCCcEEEEEEeCCCCCceEEEE
Q 008834 373 -LLNA-TTFIPNPDYYSALLWHRLMGKGVLSVATDGS----------SSLRSYAHCSKEREGITLLLINLSNQTDYVISV 440 (551)
Q Consensus 373 -l~~~-~~~~p~P~Yy~~lL~~~l~G~~Vl~~~~~~~----------~~l~~YA~c~~~~g~vtl~lIN~~~~~~~~v~i 440 (551)
+... +.....|.||+..+++.+.....|.+.++++ |.|.+.|.+....|.++++++|.+.++++.++|
T Consensus 357 i~~ekgg~~~~~~~y~~~~~~~~~g~~~~l~~~v~~p~yd~~~~~~vp~ld~sas~~~~~~~l~i~vvN~~~~d~~~~~i 436 (501)
T COG3534 357 IMTEKGGPAWLTPIYYPFQMASVHGRGTALKVAVDSPTYDCELAEDVPYLDASASYDEEGGELTIFVVNRALEDALKLNI 436 (501)
T ss_pred eeecCCCcceeeehhhhhhheeeccCceEEEEEeccCceeccccccCcceeeeeeecccCCeEEEEEEeccccccccceE
Confidence 1111 2245689999999999998888888877532 467777777776689999999999999999999
Q ss_pred EeccccceeccccccCCCCccccchhccccccCCccCCCCceeEEEEeecCCCCcccceEEECCcccccCCCCCCCCCCc
Q 008834 441 HNSMNMKLTVKGKDINGESSLSRDIKRAVSWVGSTASDGHLTREEYHLTPKDGYLQSQTMVLNGIPLQLAEDEGIPKLDP 520 (551)
Q Consensus 441 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~Lt~~~~~l~s~~v~LNG~~l~~~~~g~~p~l~p 520 (551)
++.|. . ..+.++-++||+++ +... |. + ...+...|
T Consensus 437 ~l~G~---------------------------~-----~a~~~~~~~lt~~~--~~a~----Nt----~---d~p~~V~p 471 (501)
T COG3534 437 SLNGL---------------------------K-----KAKSAEHQVLTGDD--LNAT----NT----F---DAPENVVP 471 (501)
T ss_pred Eeccc---------------------------c-----ccceeeEEEEecCc--cccc----cC----C---CCCCceec
Confidence 98872 0 12467778899763 2221 11 0 11334444
Q ss_pred eec-----CC-CCceEEccceEEEEEec
Q 008834 521 VRV-----DV-NSPIYITHLSIAFIVFP 542 (551)
Q Consensus 521 ~~~-----~~-~~~i~lpp~S~~F~vi~ 542 (551)
++- +. .....+||+|+.++.|.
T Consensus 472 ~~~~~~~vs~~~l~~~~~~~S~~virl~ 499 (501)
T COG3534 472 VPGKGATVSKNELTLDLPPLSVSVIRLK 499 (501)
T ss_pred ccCCCccccCCceeEecCCceEEEEEEe
Confidence 333 22 45688999999999874
No 3
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=99.19 E-value=8.9e-10 Score=120.64 Aligned_cols=312 Identities=16% Similarity=0.214 Sum_probs=157.0
Q ss_pred cHHHHHHHHHcCCceEecCCcccceee-EecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEee
Q 008834 83 HPLLANAIQAFQSLRIRIGGSLQDQVL-YDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLN 161 (551)
Q Consensus 83 ~~~L~~l~k~L~p~~LRiGG~~~D~~~-~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN 161 (551)
+..|+.+.+.+|--+||+=|-+.|.+. +.... ++.. ....-+..|++++|..+.|.+|++-|-
T Consensus 42 q~~l~~~~~~~gf~yvR~h~l~~ddm~~~~~~~-----------~~~~-----~~Ynf~~lD~i~D~l~~~g~~P~vel~ 105 (486)
T PF01229_consen 42 QEQLRELQEELGFRYVRFHGLFSDDMMVYSESD-----------EDGI-----PPYNFTYLDQILDFLLENGLKPFVELG 105 (486)
T ss_dssp HHHHHHHHCCS--SEEEES-TTSTTTT-EEEEE-----------TTEE-----EEE--HHHHHHHHHHHHCT-EEEEEE-
T ss_pred HHHHHHHHhccCceEEEEEeeccCchhhccccc-----------cCCC-----CcCChHHHHHHHHHHHHcCCEEEEEEE
Confidence 345666667788899999888766443 32200 0100 013346779999999999999999886
Q ss_pred cCCCCccccCCC-CCCCCC-----hHH-------HHHHHHHHH-HcCc-cc--ceeEeeccCCCCCCCCCCCCHHHHHHH
Q 008834 162 ALHGRHNIRHNA-WGGAWD-----SNN-------ARDFLKYTI-SMGY-QI--DSWEYGNELSGRTSIGASVDAELYGKD 224 (551)
Q Consensus 162 ~~~~~~~~~~~~-~~~~W~-----~~~-------A~~~l~y~~-~~g~-~i--~~wElGNEp~~~~~~g~~~ta~~Ya~d 224 (551)
+.... .+.+. ..-.|. +.. ..++++... ..|. .| -+||+.||||+.. ....-+.++|.+-
T Consensus 106 f~p~~--~~~~~~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEPd~~~-f~~~~~~~ey~~l 182 (486)
T PF01229_consen 106 FMPMA--LASGYQTVFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEPDLKD-FWWDGTPEEYFEL 182 (486)
T ss_dssp SB-GG--GBSS--EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-TTSTT-TSGGG-HHHHHHH
T ss_pred echhh--hcCCCCccccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCCCccc-ccCCCCHHHHHHH
Confidence 43321 11110 001121 122 233333332 2221 13 3679999999852 2222367889999
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEccCCC-CCHHHHHHHHhhh---CCCCcCEEEEeEcCCCCCCCc-chhhccCChhHHHH
Q 008834 225 LINLKNIINELYKNSSSKPTILAPGGF-FDQEWYAKFLQVS---GSNVVNGVTHHIYNLGPGVDP-NLVSKILNPQRLSR 299 (551)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~vgp~~~-~~~~w~~~fl~~~---g~~~id~vS~H~Y~~~~g~d~-~~~~~~l~~~~l~~ 299 (551)
|+..+++||++.|. .++.||+.. ....|..+|++-. .. .+|++|+|.|+.+...+. ......+.. .+.
T Consensus 183 y~~~~~~iK~~~p~----~~vGGp~~~~~~~~~~~~~l~~~~~~~~-~~DfiS~H~y~~~~~~~~~~~~~~~~~~--~~~ 255 (486)
T PF01229_consen 183 YDATARAIKAVDPE----LKVGGPAFAWAYDEWCEDFLEFCKGNNC-PLDFISFHSYGTDSAEDINENMYERIED--SRR 255 (486)
T ss_dssp HHHHHHHHHHH-TT----SEEEEEEEETT-THHHHHHHHHHHHCT----SEEEEEEE-BESESE-SS-EEEEB----HHH
T ss_pred HHHHHHHHHHhCCC----CcccCccccccHHHHHHHHHHHHhcCCC-CCCEEEEEecccccccccchhHHhhhhh--HHH
Confidence 99999999999875 589999432 2346888886532 32 489999999975422110 011111111 223
Q ss_pred HHHHHHHHHHHHH-HhCCCCcEEEeccccccCCCCCCcchH-HHHHHHHHHHhhhhhccCCeEE--------E-----ee
Q 008834 300 VSETFGNLKQTIE-KHGPWASAWVGESGGAYNSGGRHVSNT-FVNSFWYLDQLGMSSKYNTKVY--------C-----RQ 364 (551)
Q Consensus 300 ~~~~~~~~~~~~~-~~~~~~~~wl~Et~sa~~~G~~~vsdt-f~~alw~lD~Lg~aA~~g~~vv--------~-----~q 364 (551)
....++.++++++ +..|..|+.++|+|+... ....+-|+ |.+|+ .+..+.-.....++.+ | ..
T Consensus 256 ~~~~~~~~~~~~~~e~~p~~~~~~tE~n~~~~-~~~~~~dt~~~aA~-i~k~lL~~~~~~l~~~sywt~sD~Fee~~~~~ 333 (486)
T PF01229_consen 256 LFPELKETRPIINDEADPNLPLYITEWNASIS-PRNPQHDTCFKAAY-IAKNLLSNDGAFLDSFSYWTFSDRFEENGTPR 333 (486)
T ss_dssp HHHHHHHHHHHHHTSSSTT--EEEEEEES-SS-TT-GGGGSHHHHHH-HHH-HHHHGGGT-SEEEES-SBS---TTSS-S
T ss_pred HHHHHHHHHHHHhhccCCCCceeecccccccC-CCcchhccccchhh-HHHHHHHhhhhhhhhhhccchhhhhhccCCCC
Confidence 3345556655555 456789999999987663 23344455 44443 2332111110011211 1 11
Q ss_pred eccCCccccccCCCCccCcchHHHHHHHHhcCCceEEeecCCCCceEEEEEEeeCCCcEEEEEEeCC
Q 008834 365 TLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGITLLLINLS 431 (551)
Q Consensus 365 tl~Gg~Y~l~~~~~~~p~P~Yy~~lL~~~l~G~~Vl~~~~~~~~~l~~YA~c~~~~g~vtl~lIN~~ 431 (551)
..+-|.+||+... -.+.|.||+..|.+++ |..++... ...+. ..++++.++|++-|..
T Consensus 334 ~pf~ggfGLlt~~-gI~KPa~~A~~~L~~l-g~~~~~~~---~~~~v----t~~~~~~~~il~~n~~ 391 (486)
T PF01229_consen 334 KPFHGGFGLLTKL-GIPKPAYYAFQLLNKL-GDRLVAKG---DHYIV----TSKDDGSVQILVWNHN 391 (486)
T ss_dssp SSSSS-S-SEECC-CEE-HHHHHHHHHTT---SEEEEEE---TTEEE----EE-TTS-EEEEEEE--
T ss_pred Cceecchhhhhcc-CCCchHHHHHHHHHhh-CceeEecC---CCcee----EEcCCCeEEEEEecCc
Confidence 2233557888776 4689999999999988 66554332 22221 3344678999998953
No 4
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=98.67 E-value=1.8e-07 Score=93.08 Aligned_cols=129 Identities=16% Similarity=0.172 Sum_probs=85.8
Q ss_pred CcccceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCC-------CHHHHHHHHhhhC-
Q 008834 194 GYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFF-------DQEWYAKFLQVSG- 265 (551)
Q Consensus 194 g~~i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~-------~~~w~~~fl~~~g- 265 (551)
....+++..-||||.. .+..++++++++.++++.+.++. .+.++++|.... ...|+++|++...
T Consensus 63 ~~~~~~ll~fNEPD~~--~qsn~~p~~aa~~w~~~~~~~~~------~~~~l~sPa~~~~~~~~~~g~~Wl~~F~~~~~~ 134 (239)
T PF11790_consen 63 HPGSKHLLGFNEPDLP--GQSNMSPEEAAALWKQYMNPLRS------PGVKLGSPAVAFTNGGTPGGLDWLSQFLSACAR 134 (239)
T ss_pred ccCccceeeecCCCCC--CCCCCCHHHHHHHHHHHHhHhhc------CCcEEECCeecccCCCCCCccHHHHHHHHhccc
Confidence 5567889999999986 36779999999999998887773 346999998632 2479999998875
Q ss_pred CCCcCEEEEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccccCCCCC---CcchHHHH
Q 008834 266 SNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGR---HVSNTFVN 342 (551)
Q Consensus 266 ~~~id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~~G~~---~vsdtf~~ 342 (551)
.-.+|++++|.|. + + .+.+... +..+.++++ +||||+|.+-....+.. .+.+-+..
T Consensus 135 ~~~~D~iavH~Y~---~-~------------~~~~~~~---i~~~~~~~~--kPIWITEf~~~~~~~~~~~~~~~~fl~~ 193 (239)
T PF11790_consen 135 GCRVDFIAVHWYG---G-D------------ADDFKDY---IDDLHNRYG--KPIWITEFGCWNGGSQGSDEQQASFLRQ 193 (239)
T ss_pred CCCccEEEEecCC---c-C------------HHHHHHH---HHHHHHHhC--CCEEEEeecccCCCCCCCHHHHHHHHHH
Confidence 3369999999992 1 1 1112222 233333444 99999999754311111 22232345
Q ss_pred HHHHHHHhh
Q 008834 343 SFWYLDQLG 351 (551)
Q Consensus 343 alw~lD~Lg 351 (551)
++-++|...
T Consensus 194 ~~~~ld~~~ 202 (239)
T PF11790_consen 194 ALPWLDSQP 202 (239)
T ss_pred HHHHHhcCC
Confidence 666666653
No 5
>smart00813 Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
Probab=98.51 E-value=2.1e-06 Score=82.30 Aligned_cols=120 Identities=17% Similarity=0.156 Sum_probs=77.2
Q ss_pred eccccccCC------CCCCcchHHHHHHHHHHHhhhhhccCCeEEEe-eeccCCccccccC--CCCccCcchHHHHHHHH
Q 008834 323 GESGGAYNS------GGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCR-QTLVGGNYGLLNA--TTFIPNPDYYSALLWHR 393 (551)
Q Consensus 323 ~Et~sa~~~------G~~~vsdtf~~alw~lD~Lg~aA~~g~~vv~~-qtl~Gg~Y~l~~~--~~~~p~P~Yy~~lL~~~ 393 (551)
+|+|.++.. ....+.|+++.|.++.-.+..+-+. ++.+. |.+-.-+-.++.. +....+|.||++.||++
T Consensus 1 dEw~~w~~~~~~~l~~~~tl~dAL~~A~~l~~~~Rn~D~V--~ma~~A~lvn~~~p~~i~~~~~~~~~t~~Yyv~~lfs~ 78 (189)
T smart00813 1 DEWNVWYDSEPGLLEQQYTLRDALAEAAFLNGLERNSDRV--KMASYAQLVNVINPDMLTFNGGQAWRTTTYYVFQLFSK 78 (189)
T ss_pred CCcccCcCCCCccccccCcHHHHHHHHHHHHHHHhccCcE--EeehhhhhhccccceEEEeCCCCEEECCcCHHHHHhhh
Confidence 366665532 3457788887776654444433321 22221 2110000112222 23567899999999999
Q ss_pred hcCCceEEeecCCC---------CceEEEEEEeeCCCcEEEEEEeCCCCCceEEEEEecc
Q 008834 394 LMGKGVLSVATDGS---------SSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNSM 444 (551)
Q Consensus 394 l~G~~Vl~~~~~~~---------~~l~~YA~c~~~~g~vtl~lIN~~~~~~~~v~i~l~~ 444 (551)
++|.+++++.+.++ +.|.+.|.+..+++.++|.+||.+.++++.++|++.|
T Consensus 79 ~~g~~~l~~~v~~~~~~~~~~~~~~ld~sA~~~~~~~~~~v~vvN~~~~~~~~~~l~l~g 138 (189)
T smart00813 79 HQGGTVLPVTISSPTYDGEDSDVPALDASASKDEDGGSLTVKVVNRSPEEAVTVTISLRG 138 (189)
T ss_pred hCCceEEEEEeeCCccccCcccCCcEEEEEEEeCCCCEEEEEEEeCCCCcCEEEEEEecC
Confidence 99999999887533 4677777776544579999999998877889988876
No 6
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=98.33 E-value=6.3e-05 Score=82.25 Aligned_cols=235 Identities=19% Similarity=0.212 Sum_probs=126.3
Q ss_pred HHHHHHHH---HHcCcccceeEeeccCCCC-----CCCCCCCCHHHHHHHHHH-HHHHHHHhhcCCCCCCeEEccCCC--
Q 008834 183 ARDFLKYT---ISMGYQIDSWEYGNELSGR-----TSIGASVDAELYGKDLIN-LKNIINELYKNSSSKPTILAPGGF-- 251 (551)
Q Consensus 183 A~~~l~y~---~~~g~~i~~wElGNEp~~~-----~~~g~~~ta~~Ya~d~~~-~~~~~~~~~~~~~~~~~~vgp~~~-- 251 (551)
|.-+++|. +++|.+|.+.-+.|||+.. ......|++++-+.=.+. |.-.|++.-.. .+.+|++-+-.
T Consensus 207 A~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~~~~g--~d~kI~~~D~n~~ 284 (496)
T PF02055_consen 207 ADYFVKFIQAYKKEGIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPALRKAGLG--KDVKILIYDHNRD 284 (496)
T ss_dssp HHHHHHHHHHHHCTT--ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHHHTSTT---TTSEEEEEEEEGG
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCC--CceEEEEEecCCc
Confidence 66666665 3579999999999999952 112456888876433332 67777764221 24577665432
Q ss_pred CCHHHHHHHHhhh-CCCCcCEEEEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccccC
Q 008834 252 FDQEWYAKFLQVS-GSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYN 330 (551)
Q Consensus 252 ~~~~w~~~fl~~~-g~~~id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~ 330 (551)
..+.|...+|+.. ..+.||.+.+|.|-. ++. +..| .+ +.+..|++.+|.+|......
T Consensus 285 ~~~~~~~~il~d~~A~~yv~GiA~HwY~g----~~~-------~~~l----------~~-~h~~~P~k~l~~TE~~~g~~ 342 (496)
T PF02055_consen 285 NLPDYADTILNDPEAAKYVDGIAFHWYGG----DPS-------PQAL----------DQ-VHNKFPDKFLLFTEACCGSW 342 (496)
T ss_dssp GTTHHHHHHHTSHHHHTTEEEEEEEETTC----S-H-------CHHH----------HH-HHHHSTTSEEEEEEEESS-S
T ss_pred ccchhhhhhhcChhhHhheeEEEEECCCC----Cch-------hhHH----------HH-HHHHCCCcEEEeeccccCCC
Confidence 2347888888632 122699999999952 110 1111 11 12346899999999743221
Q ss_pred CCCCCcc-hHHHHHHHHHHH-hhhhhccCCeEEEeeec----cCC-cc--------ccccC--CCCccCcchHHHHHHHH
Q 008834 331 SGGRHVS-NTFVNSFWYLDQ-LGMSSKYNTKVYCRQTL----VGG-NY--------GLLNA--TTFIPNPDYYSALLWHR 393 (551)
Q Consensus 331 ~G~~~vs-dtf~~alw~lD~-Lg~aA~~g~~vv~~qtl----~Gg-~Y--------~l~~~--~~~~p~P~Yy~~lL~~~ 393 (551)
.....+. ..+..+..+..- ++.. .++...++.-.+ .|| ++ .+++. +.+..+|.||.+-=|+|
T Consensus 343 ~~~~~~~~g~w~~~~~y~~~ii~~l-nn~~~gw~~WNl~LD~~GGP~~~~n~~d~~iivd~~~~~~~~~p~yY~~gHfSK 421 (496)
T PF02055_consen 343 NWDTSVDLGSWDRAERYAHDIIGDL-NNWVSGWIDWNLALDENGGPNWVGNFCDAPIIVDSDTGEFYKQPEYYAMGHFSK 421 (496)
T ss_dssp TTS-SS-TTHHHHHHHHHHHHHHHH-HTTEEEEEEEESEBETTS---TT---B--SEEEEGGGTEEEE-HHHHHHHHHHT
T ss_pred CcccccccccHHHHHHHHHHHHHHH-HhhceeeeeeeeecCCCCCCcccCCCCCceeEEEcCCCeEEEcHHHHHHHHHhc
Confidence 1111111 123334333332 3322 234433322111 122 11 01222 34677999999999999
Q ss_pred hc--CCceEEeecCCC-CceEEEEEEeeCCCcEEEEEEeCCCCCceEEEEEecc
Q 008834 394 LM--GKGVLSVATDGS-SSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNSM 444 (551)
Q Consensus 394 l~--G~~Vl~~~~~~~-~~l~~YA~c~~~~g~vtl~lIN~~~~~~~~v~i~l~~ 444 (551)
++ |...+.++.+.. ..|.+-|.-.. +|.++|+++|....+ ..++|++++
T Consensus 422 FV~PGa~RI~st~~~~~~~l~~vAF~nP-DGs~vvVv~N~~~~~-~~~~v~v~~ 473 (496)
T PF02055_consen 422 FVRPGAVRIGSTSSSSDSGLEAVAFLNP-DGSIVVVVLNRGDSD-QNFSVTVKD 473 (496)
T ss_dssp TS-TT-EEEEEEESSSTTTEEEEEEEET-TSEEEEEEEE-SSS--EEEEEEEEC
T ss_pred ccCCCCEEEEeeccCCCCceeEEEEECC-CCCEEEEEEcCCCCc-cceEEEEec
Confidence 99 666777665433 36777675544 689999999988766 555666654
No 7
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=98.24 E-value=3.4e-05 Score=77.80 Aligned_cols=217 Identities=16% Similarity=0.104 Sum_probs=110.0
Q ss_pred cHHHHHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeec
Q 008834 83 HPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNA 162 (551)
Q Consensus 83 ~~~L~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~ 162 (551)
.......++++|--.||+-=. |..-.. + .| +... ..-...++|.+++.|++.|..+|+.+..
T Consensus 23 ~~~~~~~~~~~G~n~VRi~v~------~~~~~~--~-~~-----~~~~----~~~~~~~ld~~v~~a~~~gi~vild~h~ 84 (281)
T PF00150_consen 23 TEADFDQLKALGFNTVRIPVG------WEAYQE--P-NP-----GYNY----DETYLARLDRIVDAAQAYGIYVILDLHN 84 (281)
T ss_dssp HHHHHHHHHHTTESEEEEEEE------STSTST--T-ST-----TTSB----THHHHHHHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEeCCC------HHHhcC--C-CC-----Cccc----cHHHHHHHHHHHHHHHhCCCeEEEEecc
Confidence 345678889999999997222 311110 1 00 1000 0112356799999999999999999876
Q ss_pred CCCCccccCCCCCCCCChHHHHHH----HHHH-HH--cCcccceeEeeccCCCCCCCCCCC---CHHHHHHHHHHHHHHH
Q 008834 163 LHGRHNIRHNAWGGAWDSNNARDF----LKYT-IS--MGYQIDSWEYGNELSGRTSIGASV---DAELYGKDLINLKNII 232 (551)
Q Consensus 163 ~~~~~~~~~~~~~~~W~~~~A~~~----l~y~-~~--~g~~i~~wElGNEp~~~~~~g~~~---ta~~Ya~d~~~~~~~~ 232 (551)
..+= ...+ ..........++ +++. .. ....+.+|||.|||+... .+..+ ++.+|.+-+.+..++|
T Consensus 85 ~~~w-~~~~---~~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-~~~~w~~~~~~~~~~~~~~~~~~I 159 (281)
T PF00150_consen 85 APGW-ANGG---DGYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGN-DDANWNAQNPADWQDWYQRAIDAI 159 (281)
T ss_dssp STTC-SSST---STTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTT-STTTTSHHHTHHHHHHHHHHHHHH
T ss_pred Cccc-cccc---cccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccC-CccccccccchhhhhHHHHHHHHH
Confidence 4110 0000 011122222222 2221 22 233577999999999851 11122 4577888888888999
Q ss_pred HHhhcCCCCCCeEEccCCCCCHHHHHHHHhh--hCCCCcCEEEEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHH
Q 008834 233 NELYKNSSSKPTILAPGGFFDQEWYAKFLQV--SGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQT 310 (551)
Q Consensus 233 ~~~~~~~~~~~~~vgp~~~~~~~w~~~fl~~--~g~~~id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~ 310 (551)
+++.|+ .+.+++.... .......+.+. ... ..+++++|.|.... .......-...........++.+...
T Consensus 160 r~~~~~---~~i~~~~~~~-~~~~~~~~~~~P~~~~-~~~~~~~H~Y~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (281)
T PF00150_consen 160 RAADPN---HLIIVGGGGW-GADPDGAAADNPNDAD-NNDVYSFHFYDPYD---FSDQWNPGNWGDASALESSFRAALNW 231 (281)
T ss_dssp HHTTSS---SEEEEEEHHH-HTBHHHHHHHSTTTTT-TSEEEEEEEETTTC---HHTTTSTCSHHHHHHHHHHHHHHHHH
T ss_pred HhcCCc---ceeecCCCcc-ccccchhhhcCccccc-CceeEEeeEeCCCC---cCCccccccchhhhHHHHHHHHHHHH
Confidence 988765 2344443211 01111111111 112 37899999998321 10000000111111222333444333
Q ss_pred HHHhCCCCcEEEeccccccCCC
Q 008834 311 IEKHGPWASAWVGESGGAYNSG 332 (551)
Q Consensus 311 ~~~~~~~~~~wl~Et~sa~~~G 332 (551)
+.+ .++|+|+||+|.....+
T Consensus 232 ~~~--~g~pv~~gE~G~~~~~~ 251 (281)
T PF00150_consen 232 AKK--NGKPVVVGEFGWSNNDG 251 (281)
T ss_dssp HHH--TTSEEEEEEEESSTTTS
T ss_pred HHH--cCCeEEEeCcCCcCCCC
Confidence 333 35899999999875433
No 8
>PF06964 Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-terminus; InterPro: IPR010720 This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (3.2.1.55 from EC). This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides [].; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process; PDB: 3FW6_A 3II1_A 3S2C_K 1QW9_A 1PZ3_B 1PZ2_B 1QW8_A 3UG4_A 3UG3_A 4ATW_B ....
Probab=98.23 E-value=8.4e-06 Score=77.30 Aligned_cols=102 Identities=18% Similarity=0.275 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHHHHhhhhhccCCeEEEeeeccC--Cc----cccc--cCCCCccCcchHHHHHHHHhcCCceEEeec
Q 008834 333 GRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVG--GN----YGLL--NATTFIPNPDYYSALLWHRLMGKGVLSVAT 404 (551)
Q Consensus 333 ~~~vsdtf~~alw~lD~Lg~aA~~g~~vv~~qtl~G--g~----Y~l~--~~~~~~p~P~Yy~~lL~~~l~G~~Vl~~~~ 404 (551)
...+.++.+.|.++.-.+..+-. +++.+.-.++. +. ..|+ +.+....+|.||++.||+++.|..+|
T Consensus 17 ~~~l~~AL~~A~~l~~~eRnsD~--V~ma~~A~l~~~~~~~~w~~~li~~~~~~~~~tpsY~v~~lf~~~~g~~~l---- 90 (177)
T PF06964_consen 17 RYTLRDALAEAAFLNGFERNSDV--VKMACYAPLVNNIGDTQWTPDLITFDGDQVFGTPSYYVQKLFSNHRGDTVL---- 90 (177)
T ss_dssp --BHHHHHHHHHHHHHHHHTTTT--EEEEEEE-SBSTTS------SEEEETTSEEEESHHHHHHHHHHHCTTSEEE----
T ss_pred cCCHHHHHHHHHHHHHHHhCCCE--EeEEccchhhccccccccccceEEcCCCCEEECchHHHHHHHHhcCCCeEe----
Confidence 34566776666555444443332 23333322222 10 1232 33345689999999999999999998
Q ss_pred CCCCceEEEEEEeeCCCcEEEEEEeCCCCCceEEEEEecc
Q 008834 405 DGSSSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNSM 444 (551)
Q Consensus 405 ~~~~~l~~YA~c~~~~g~vtl~lIN~~~~~~~~v~i~l~~ 444 (551)
+.+.+.|.++.+++.+.|.+||.+.+ ++.++|+++|
T Consensus 91 ---~~l~~~As~d~~~~~l~v~vVN~~~~-~~~v~l~l~g 126 (177)
T PF06964_consen 91 ---PPLDVSASRDEDGGELYVKVVNRSSE-PQTVTLNLQG 126 (177)
T ss_dssp ---ESEEEEEEEETTTTEEEEEEEE-SSS-BEEEEEEETT
T ss_pred ---ccEEEEEEEECCCCEEEEEEEECCCC-CEEEEEEEcC
Confidence 56777777766555799999999888 5889998877
No 9
>PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases.; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A ....
Probab=98.08 E-value=9.8e-06 Score=79.19 Aligned_cols=96 Identities=13% Similarity=0.211 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHHc------CcccceeEeeccCCCCC-----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEcc
Q 008834 180 SNNARDFLKYTISM------GYQIDSWEYGNELSGRT-----SIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAP 248 (551)
Q Consensus 180 ~~~A~~~l~y~~~~------g~~i~~wElGNEp~~~~-----~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp 248 (551)
+.=..+||.|.+.+ +..|++|.|.|||++.. -.+..++.+++.+...+++++||+++|+ .+++||
T Consensus 103 ~~y~~ewV~~l~~~~g~a~~~~gvk~y~lDNEP~LW~~TH~dVHP~~~t~~El~~r~i~~AkaiK~~DP~----a~v~GP 178 (239)
T PF12891_consen 103 PVYMDEWVNYLVNKYGNASTNGGVKYYSLDNEPDLWHSTHRDVHPEPVTYDELRDRSIEYAKAIKAADPD----AKVFGP 178 (239)
T ss_dssp EEEHHHHHHHHHHHH--TTSTTS--EEEESS-GGGHHHHTTTT--S---HHHHHHHHHHHHHHHHHH-TT----SEEEEE
T ss_pred HhHHHHHHHHHHHHHhccccCCCceEEEecCchHhhcccccccCCCCCCHHHHHHHHHHHHHHHHhhCCC----CeEeec
Confidence 34467888886533 56799999999999863 2377899999999999999999999876 599999
Q ss_pred CCC---------CC------------HHHHHHHHh-------hhCCCCcCEEEEeEcCC
Q 008834 249 GGF---------FD------------QEWYAKFLQ-------VSGSNVVNGVTHHIYNL 279 (551)
Q Consensus 249 ~~~---------~~------------~~w~~~fl~-------~~g~~~id~vS~H~Y~~ 279 (551)
... .+ ..|+.=||+ +.|...+|++.+|+|+.
T Consensus 179 ~~wgw~~y~~~~~d~~~~~d~~~~g~~~fl~wyL~qm~~~~~~~G~RLLDvlDiH~YPq 237 (239)
T PF12891_consen 179 VEWGWCGYFSSADDAPGWPDRAAHGNYDFLPWYLDQMKEAEKSTGKRLLDVLDIHYYPQ 237 (239)
T ss_dssp EE-SHHHHHHTTTHHTTHHHHHHTTT-SHHHHHHHHHHHHHHHHTS-S-SEEEEEE--S
T ss_pred hhhccceeeccCccccccccccccCCcchHHHHHHHHHHhhhhcCceeeeeeeeeecCC
Confidence 531 11 125555555 23656899999999985
No 10
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=98.00 E-value=0.00025 Score=73.50 Aligned_cols=196 Identities=18% Similarity=0.213 Sum_probs=107.8
Q ss_pred CcHHHHHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEee
Q 008834 82 SHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLN 161 (551)
Q Consensus 82 ~~~~L~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN 161 (551)
....+.+++|.-|...||+ ++ |.+.. + - +..+.++-.++.+=+++.|.++++.+-
T Consensus 25 ~~~d~~~ilk~~G~N~vRl------Rv-wv~P~------------~--~----g~~~~~~~~~~akrak~~Gm~vlldfH 79 (332)
T PF07745_consen 25 QEKDLFQILKDHGVNAVRL------RV-WVNPY------------D--G----GYNDLEDVIALAKRAKAAGMKVLLDFH 79 (332)
T ss_dssp SB--HHHHHHHTT--EEEE------EE--SS-T------------T--T----TTTSHHHHHHHHHHHHHTT-EEEEEE-
T ss_pred CCCCHHHHHHhcCCCeEEE------Ee-ccCCc------------c--c----ccCCHHHHHHHHHHHHHCCCeEEEeec
Confidence 3467889999999888886 33 43311 0 0 123444556777778889999998876
Q ss_pred cCC-----CCccccCCCCCCCCCh----HHHHHHHHHH-------HHcCcccceeEeeccCCCC--CCCCCCCCHHHHHH
Q 008834 162 ALH-----GRHNIRHNAWGGAWDS----NNARDFLKYT-------ISMGYQIDSWEYGNELSGR--TSIGASVDAELYGK 223 (551)
Q Consensus 162 ~~~-----~~~~~~~~~~~~~W~~----~~A~~~l~y~-------~~~g~~i~~wElGNEp~~~--~~~g~~~ta~~Ya~ 223 (551)
+.. +...+| .+|.. +.+.++-+|+ +..|...+.+|||||.+.- +..|..-+.+++++
T Consensus 80 YSD~WaDPg~Q~~P-----~aW~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ 154 (332)
T PF07745_consen 80 YSDFWADPGKQNKP-----AAWANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLAK 154 (332)
T ss_dssp SSSS--BTTB-B-------TTCTSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHHH
T ss_pred ccCCCCCCCCCCCC-----ccCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCccccccccCcCCCccCHHHHHH
Confidence 532 222222 35653 2344444554 4578899999999998752 23344566777887
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEE----ccCCCCCHHHHHHHHhhhCCCCcCEEEEeEcCCCCCCCcchhhccCChhHHHH
Q 008834 224 DLINLKNIINELYKNSSSKPTIL----APGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSR 299 (551)
Q Consensus 224 d~~~~~~~~~~~~~~~~~~~~~v----gp~~~~~~~w~~~fl~~~g~~~id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~ 299 (551)
-+..-.+++|++.|+ ++++ .|+......|+-+-|.+.+.+ .|++.+++||.-.+ .++.
T Consensus 155 ll~ag~~AVr~~~p~----~kV~lH~~~~~~~~~~~~~f~~l~~~g~d-~DviGlSyYP~w~~-------------~l~~ 216 (332)
T PF07745_consen 155 LLNAGIKAVREVDPN----IKVMLHLANGGDNDLYRWFFDNLKAAGVD-FDVIGLSYYPFWHG-------------TLED 216 (332)
T ss_dssp HHHHHHHHHHTHSST----SEEEEEES-TTSHHHHHHHHHHHHHTTGG--SEEEEEE-STTST--------------HHH
T ss_pred HHHHHHHHHHhcCCC----CcEEEEECCCCchHHHHHHHHHHHhcCCC-cceEEEecCCCCcc-------------hHHH
Confidence 777777888887665 3433 222111124444445455654 89999999996422 1222
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEeccccccC
Q 008834 300 VSETFGNLKQTIEKHGPWASAWVGESGGAYN 330 (551)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~ 330 (551)
+. ..++.+.+++ +||++|.||+-.+.
T Consensus 217 l~---~~l~~l~~ry--~K~V~V~Et~yp~t 242 (332)
T PF07745_consen 217 LK---NNLNDLASRY--GKPVMVVETGYPWT 242 (332)
T ss_dssp HH---HHHHHHHHHH--T-EEEEEEE---SB
T ss_pred HH---HHHHHHHHHh--CCeeEEEecccccc
Confidence 22 3445555677 59999999986554
No 11
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane]
Probab=97.70 E-value=0.0029 Score=64.71 Aligned_cols=211 Identities=13% Similarity=0.115 Sum_probs=116.3
Q ss_pred HHHHHHHHcCcccceeEeeccCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCC-HHHHHHHHh
Q 008834 185 DFLKYTISMGYQIDSWEYGNELSGRTS-IGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFD-QEWYAKFLQ 262 (551)
Q Consensus 185 ~~l~y~~~~g~~i~~wElGNEp~~~~~-~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~~-~~w~~~fl~ 262 (551)
+++.|.+..|.++++.-+=||||.-+. -++.|+++|-.+=++++..-+. ...+++-|+++.+ ++|-+..|+
T Consensus 157 ~fv~~m~~nGvnlyalSVQNEPd~~p~~d~~~wtpQe~~rF~~qyl~si~-------~~~rV~~pes~~~~~~~~dp~ln 229 (433)
T COG5520 157 DFVLEMKNNGVNLYALSVQNEPDYAPTYDWCWWTPQEELRFMRQYLASIN-------AEMRVIIPESFKDLPNMSDPILN 229 (433)
T ss_pred HHHHHHHhCCCceeEEeeccCCcccCCCCcccccHHHHHHHHHHhhhhhc-------cccEEecchhccccccccccccc
Confidence 444556778999999999999997542 3667999887755554444332 2368888987643 355555554
Q ss_pred h--hCCCCcCEEEEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccccCCCCCCcchHH
Q 008834 263 V--SGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTF 340 (551)
Q Consensus 263 ~--~g~~~id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~~G~~~vsdtf 340 (551)
. +-. .+|.+.+|.|... .+ + -|.+ + .+....+|.+|++|.-.-. ..++-.|.
T Consensus 230 Dp~a~a-~~~ilg~H~Ygg~--v~-----~--~p~~----------l---ak~~~~gKdlwmte~y~~e--sd~~s~dr- 283 (433)
T COG5520 230 DPKALA-NMDILGTHLYGGQ--VS-----D--QPYP----------L---AKQKPAGKDLWMTECYPPE--SDPNSADR- 283 (433)
T ss_pred CHhHhc-ccceeEeeecccc--cc-----c--chhh----------H---hhCCCcCCceEEeecccCC--CCCCcchH-
Confidence 2 222 4999999999521 10 0 0111 1 1122447999999973211 11122233
Q ss_pred HHHHHHHHHhhhhhccC-CeEEEeeeccCCccccccCC-CCccCcchHHHHHHHHhcCCc--eEEeecCCCCceEEEEEE
Q 008834 341 VNSFWYLDQLGMSSKYN-TKVYCRQTLVGGNYGLLNAT-TFIPNPDYYSALLWHRLMGKG--VLSVATDGSSSLRSYAHC 416 (551)
Q Consensus 341 ~~alw~lD~Lg~aA~~g-~~vv~~qtl~Gg~Y~l~~~~-~~~p~P~Yy~~lL~~~l~G~~--Vl~~~~~~~~~l~~YA~c 416 (551)
.++|...++..+...| .+.+.--. +-.+|+..... +.. -+=|-.--++.++++. +++.+ .+++--+|+..
T Consensus 284 -~~~~~~~hi~~gm~~gg~~ayv~W~-i~~~~~~~~~~gg~~--k~~y~ma~fskf~q~gy~rldat--~sp~~nvyvsa 357 (433)
T COG5520 284 -EALHVALHIHIGMTEGGFQAYVWWN-IRLDYGGGPNHGGNS--KRGYCMAHFSKFVQNGYVRLDAT--KSPYGNVYVSA 357 (433)
T ss_pred -HHHHHHHHHHhhccccCccEEEEEE-EeeccCCCcCCCccc--ccceeEeeeeeeccCCceEEecc--cCccceEEEEE
Confidence 5667666666655444 33322111 11334333221 111 1224444456666666 44443 34443444432
Q ss_pred eeCCCcEEEEEEeCCCCC
Q 008834 417 SKEREGITLLLINLSNQT 434 (551)
Q Consensus 417 ~~~~g~vtl~lIN~~~~~ 434 (551)
-.+++.+.|+.||.+.+.
T Consensus 358 yvg~nkvvivaink~~~~ 375 (433)
T COG5520 358 YVGPNKVVIVAINKGTYP 375 (433)
T ss_pred EecCCcEEEEeecccccc
Confidence 224678999999997766
No 12
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=97.56 E-value=0.00015 Score=60.66 Aligned_cols=74 Identities=22% Similarity=0.163 Sum_probs=41.4
Q ss_pred cccceeEeeccCCCCCC--C---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCCHHHHHHHHhhhC-CCC
Q 008834 195 YQIDSWEYGNELSGRTS--I---GASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSG-SNV 268 (551)
Q Consensus 195 ~~i~~wElGNEp~~~~~--~---g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~~~~w~~~fl~~~g-~~~ 268 (551)
.+|.+|||+||+++... . ......+.|.+-.++..++||+++|+. |..+|-.+. +... ++... + .
T Consensus 9 ~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~---pvt~g~~~~-~~~~----~~~~~~~-~ 79 (88)
T PF12876_consen 9 PRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQ---PVTSGFWGG-DWED----LEQLQAE-N 79 (88)
T ss_dssp GGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS----EE--B--S--TTH----HHHS--T-T
T ss_pred CCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCC---cEEeecccC-CHHH----HHHhchh-c
Confidence 45889999999444322 1 123456788888899999999998863 444443222 1112 33333 4 4
Q ss_pred cCEEEEeEc
Q 008834 269 VNGVTHHIY 277 (551)
Q Consensus 269 id~vS~H~Y 277 (551)
+|++|+|.|
T Consensus 80 ~DvisfH~Y 88 (88)
T PF12876_consen 80 LDVISFHPY 88 (88)
T ss_dssp -SSEEB-EE
T ss_pred CCEEeeecC
Confidence 999999998
No 13
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.063 Score=53.94 Aligned_cols=218 Identities=14% Similarity=0.099 Sum_probs=113.6
Q ss_pred ccccccC--CcHHHHHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhc
Q 008834 75 IWYFQDL--SHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRT 152 (551)
Q Consensus 75 g~~~~dl--~~~~L~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~ 152 (551)
|-.|+|- ..++..+.+|+-|..+||+ -+|.+... ..++.+| .+.-.-..--++..=+++.
T Consensus 55 Gvkf~d~ng~~qD~~~iLK~~GvNyvRl-------RvwndP~d---------sngn~yg--gGnnD~~k~ieiakRAk~~ 116 (403)
T COG3867 55 GVKFFDTNGVRQDALQILKNHGVNYVRL-------RVWNDPYD---------SNGNGYG--GGNNDLKKAIEIAKRAKNL 116 (403)
T ss_pred CceEEccCChHHHHHHHHHHcCcCeEEE-------EEecCCcc---------CCCCccC--CCcchHHHHHHHHHHHHhc
Confidence 5555552 3566778889999998886 23544210 0111111 1111111224556667778
Q ss_pred CCEEEEEeecCCCCccccCCCCCCCCChHH----HHHHHHHH-------HHcCcccceeEeeccCCCC--CCCCCCCCHH
Q 008834 153 RAIVSFGLNALHGRHNIRHNAWGGAWDSNN----ARDFLKYT-------ISMGYQIDSWEYGNELSGR--TSIGASVDAE 219 (551)
Q Consensus 153 G~~~i~glN~~~~~~~~~~~~~~~~W~~~~----A~~~l~y~-------~~~g~~i~~wElGNEp~~~--~~~g~~~ta~ 219 (551)
|.++++.+-+..-=.+......-.+|..-+ -+++-+|+ ++.|..+.-.|+|||.++- |..|..-+-+
T Consensus 117 GmKVl~dFHYSDfwaDPakQ~kPkaW~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~ 196 (403)
T COG3867 117 GMKVLLDFHYSDFWADPAKQKKPKAWENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGFLWPDGEGRNFD 196 (403)
T ss_pred CcEEEeeccchhhccChhhcCCcHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCceeccCCCCcChH
Confidence 999998765432100000000112343211 12233343 3568889899999998863 2223322444
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCCHHHHHHHHhhhCCCCcCEEEEeEcCCCCCCCcchhhccCChhHHHH
Q 008834 220 LYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSR 299 (551)
Q Consensus 220 ~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~~~~w~~~fl~~~g~~~id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~ 299 (551)
..++-+.+-.+++|++.|++....-+.-|....-..|+-+=|.+.+-+ .|++...+|+.-.|. |+.
T Consensus 197 k~a~L~n~g~~avrev~p~ikv~lHla~g~~n~~y~~~fd~ltk~nvd-fDVig~SyYpyWhgt-------------l~n 262 (403)
T COG3867 197 KMAALLNAGIRAVREVSPTIKVALHLAEGENNSLYRWIFDELTKRNVD-FDVIGSSYYPYWHGT-------------LNN 262 (403)
T ss_pred HHHHHHHHHhhhhhhcCCCceEEEEecCCCCCchhhHHHHHHHHcCCC-ceEEeeeccccccCc-------------HHH
Confidence 555555555556666555421111122233333345555445455554 899999999875331 222
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEecccccc
Q 008834 300 VSETFGNLKQTIEKHGPWASAWVGESGGAY 329 (551)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~ 329 (551)
+. ..+..+.++|. |.+-+-|++..|
T Consensus 263 L~---~nl~dia~rY~--K~VmV~Etay~y 287 (403)
T COG3867 263 LT---TNLNDIASRYH--KDVMVVETAYTY 287 (403)
T ss_pred HH---hHHHHHHHHhc--CeEEEEEeccee
Confidence 21 23555666774 789999998766
No 14
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=96.46 E-value=0.69 Score=46.35 Aligned_cols=66 Identities=11% Similarity=0.030 Sum_probs=41.3
Q ss_pred ccchhhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCCh-----HHHHHHHHHHH----HcCcccceeEeeccC
Q 008834 136 CLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDS-----NNARDFLKYTI----SMGYQIDSWEYGNEL 206 (551)
Q Consensus 136 ~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~-----~~A~~~l~y~~----~~g~~i~~wElGNEp 206 (551)
....+..|.+.+||++.|.++.... +.-.. +. ..|.. +....+.+|.. ..+.+|..|++.|||
T Consensus 12 ~~n~~~~D~~~~~a~~~gi~v~gH~-l~W~~-~~------P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~i~~wdV~NE~ 83 (254)
T smart00633 12 QFNFSGADAIVNFAKENGIKVRGHT-LVWHS-QT------PDWVFNLSKETLLARLENHIKTVVGRYKGKIYAWDVVNEA 83 (254)
T ss_pred ccChHHHHHHHHHHHHCCCEEEEEE-Eeecc-cC------CHhhhcCCHHHHHHHHHHHHHHHHHHhCCcceEEEEeeec
Confidence 3445677999999999999985432 11111 11 24432 22444555642 345669999999999
Q ss_pred CCC
Q 008834 207 SGR 209 (551)
Q Consensus 207 ~~~ 209 (551)
...
T Consensus 84 ~~~ 86 (254)
T smart00633 84 LHD 86 (254)
T ss_pred ccC
Confidence 864
No 15
>COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=95.81 E-value=0.084 Score=55.42 Aligned_cols=181 Identities=17% Similarity=0.144 Sum_probs=100.9
Q ss_pred cceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCCHHHHHHHHhhhCCCCcCEEEEeE
Q 008834 197 IDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHI 276 (551)
Q Consensus 197 i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~~~~w~~~fl~~~g~~~id~vS~H~ 276 (551)
.--+++-|||+.. .+-.+|-+-+....+ +.+|. ..+-| ++..+....|++ ..+ .+|+|+.|.
T Consensus 105 kw~f~~~~~pn~~------ad~~eyfk~y~~~a~---~~~p~----i~vg~---~w~~e~l~~~~k-~~d-~idfvt~~a 166 (428)
T COG3664 105 KWPFYSPNEPNLL------ADKQEYFKLYDATAR---QRAPS----IQVGG---SWNTERLHEFLK-KAD-EIDFVTELA 166 (428)
T ss_pred ecceeecCCCCcc------cchHHHHHHHHhhhh---ccCcc----eeecc---ccCcHHHhhhhh-ccC-cccceeecc
Confidence 3467888999975 333344432222222 22332 23333 233344555665 344 499999999
Q ss_pred cCCCCC-CCc-chhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccccCCCCCCcchHHHHHHHHHHHhhhhh
Q 008834 277 YNLGPG-VDP-NLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSS 354 (551)
Q Consensus 277 Y~~~~g-~d~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~~G~~~vsdtf~~alw~lD~Lg~aA 354 (551)
|..... .+. ...+..+.+. .......+.+++.+++++-++|+-+.|+|..+ ++..-+-++|+.|--.+..|.-+.
T Consensus 167 ~~~~av~~~~~~~~~~~l~~~--~~~l~~~r~~~d~i~~~~~~~pl~~~~wntlt-~~~~~~n~sy~raa~i~~~Lr~~g 243 (428)
T COG3664 167 NSVDAVDFSTPGAEEVKLSEL--KRTLEDLRGLKDLIQHHSLGLPLLLTNWNTLT-GPREPTNGSYVRAAYIMRLLREAG 243 (428)
T ss_pred cccccccccCCCchhhhhhhh--hhhhhHHHHHHHHHHhccCCCcceeecccccC-CCccccCceeehHHHHHHHHHhcC
Confidence 964311 111 1112222322 34556778889999988889999999999877 444556677777555554444332
Q ss_pred c----------cCCe-EEEeeec--cCCccccccCCCCccCcchHHHHHHHHhcCCceEE
Q 008834 355 K----------YNTK-VYCRQTL--VGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLS 401 (551)
Q Consensus 355 ~----------~g~~-vv~~qtl--~Gg~Y~l~~~~~~~p~P~Yy~~lL~~~l~G~~Vl~ 401 (551)
. .... -.+.|+. + +..++++.- ..-+|.|++++++.++ |..++.
T Consensus 244 ~~v~a~~yW~~sdl~e~~g~~~~~~~-~gfel~~~~-~~rrpa~~~~l~~n~L-g~~~l~ 300 (428)
T COG3664 244 SPVDAFGYWTNSDLHEEHGPPEAPFV-GGFELFAPY-GGRRPAWMAALFFNRL-GRTLLS 300 (428)
T ss_pred ChhhhhhhhhcccccccCCCcccccc-cceeeeccc-ccchhHHHHHHHHHHH-HHHhhh
Confidence 2 1111 0012211 1 122344433 2458999999999999 877654
No 16
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=95.42 E-value=0.12 Score=54.45 Aligned_cols=169 Identities=15% Similarity=0.084 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCC----------CCCCChHHHHHHHHHH---HHcCcccceeEeeccC
Q 008834 140 QRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAW----------GGAWDSNNARDFLKYT---ISMGYQIDSWEYGNEL 206 (551)
Q Consensus 140 ~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~----------~~~W~~~~A~~~l~y~---~~~g~~i~~wElGNEp 206 (551)
.+| |++-+++-|++.+..+.-...-.-+..+.. ...|-..-|.-|++++ +..|.++.+.+.=|||
T Consensus 106 Qrw--fL~~Ak~rGV~~f~aFSNSPP~~MT~NG~~~g~~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP 183 (384)
T PF14587_consen 106 QRW--FLKAAKERGVNIFEAFSNSPPWWMTKNGSASGGDDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEP 183 (384)
T ss_dssp HHH--HHHHHHHTT---EEEE-SSS-GGGSSSSSSB-S-SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-T
T ss_pred HHH--HHHHHHHcCCCeEEEeecCCCHHHhcCCCCCCCCccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCC
Confidence 445 778899999988776522100000001100 0111112344444443 4679999999999999
Q ss_pred CCCC----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCC-----CC--------HHHHHHHHhhhCC---
Q 008834 207 SGRT----SIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGF-----FD--------QEWYAKFLQVSGS--- 266 (551)
Q Consensus 207 ~~~~----~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~-----~~--------~~w~~~fl~~~g~--- 266 (551)
+..| +-|+.+++++-++=.+.|++.|++.-. ..+|+.++.. +. ..-+..|++....
T Consensus 184 ~~~W~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL----~t~I~~~Ea~~~~~l~~~~~~~~~r~~~i~~ff~~~s~~yi 259 (384)
T PF14587_consen 184 QWNWAGGSQEGCHFTNEEQADVIRALDKALKKRGL----STKISACEAGDWEYLYKTDKNDWGRGNQIEAFFNPDSSTYI 259 (384)
T ss_dssp TS-GG--SS-B----HHHHHHHHHHHHHHHHHHT-----S-EEEEEEESSGGGGS---S-TTS---HHHHHHSTTSTT--
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHhcCC----CceEEecchhhHHHHhhccCCchhhhhhHHhhcCCCchhhh
Confidence 9764 347889999888888888888887622 2355555421 00 1335677754321
Q ss_pred ----CCcCEEEEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccc
Q 008834 267 ----NVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGA 328 (551)
Q Consensus 267 ----~~id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa 328 (551)
.+-..++-|.|.... + .+.+....+.+.+.++++.|+.++|.+|+..-
T Consensus 260 ~~l~~v~~~i~~HsYwt~~---~-----------~~~l~~~R~~~~~~~~~~~~~~~~wqtE~~il 311 (384)
T PF14587_consen 260 GDLPNVPNIISGHSYWTDS---P-----------WDDLRDIRKQLADKLDKYSPGLKYWQTEYCIL 311 (384)
T ss_dssp TT-TTEEEEEEE--TT-SS---S-----------HHHHHHHHHHHHHHHHTTSS--EEEE----S-
T ss_pred hccccchhheeecccccCC---C-----------HHHHHHHHHHHHHHHHhhCcCCceeeeeeeec
Confidence 245679999997541 1 23344555667778888889999999997543
No 17
>PRK10150 beta-D-glucuronidase; Provisional
Probab=95.32 E-value=0.29 Score=55.42 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=36.3
Q ss_pred cceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCCHHHHHHHHhhhCCCCcCEEEEeE
Q 008834 197 IDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHI 276 (551)
Q Consensus 197 i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~~~~w~~~fl~~~g~~~id~vS~H~ 276 (551)
|..|.+|||+... ......-++++.+++|+.+|+ ++.-.+-..... ... ..... .+|++++|.
T Consensus 409 Ii~Ws~gNE~~~~--------~~~~~~~~~~l~~~~k~~Dpt---R~vt~~~~~~~~--~~~---~~~~~-~~Dv~~~N~ 471 (604)
T PRK10150 409 VVMWSIANEPASR--------EQGAREYFAPLAELTRKLDPT---RPVTCVNVMFAT--PDT---DTVSD-LVDVLCLNR 471 (604)
T ss_pred EEEEeeccCCCcc--------chhHHHHHHHHHHHHHhhCCC---CceEEEecccCC--ccc---ccccC-cccEEEEcc
Confidence 7799999998642 112223346777888888765 222222110000 000 11122 589999998
Q ss_pred cCC
Q 008834 277 YNL 279 (551)
Q Consensus 277 Y~~ 279 (551)
|+.
T Consensus 472 Y~~ 474 (604)
T PRK10150 472 YYG 474 (604)
T ss_pred cce
Confidence 874
No 18
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=93.57 E-value=1.2 Score=45.50 Aligned_cols=101 Identities=19% Similarity=0.240 Sum_probs=55.9
Q ss_pred HHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecC-CC
Q 008834 87 ANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNAL-HG 165 (551)
Q Consensus 87 ~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~-~~ 165 (551)
+.++|++|--.||.... | + + +.|+++|.+.|.-++--+... .+
T Consensus 42 ~~l~k~~G~N~iR~~h~--------------p--~-----~---------------~~~~~~cD~~GilV~~e~~~~~~~ 85 (298)
T PF02836_consen 42 LELMKEMGFNAIRTHHY--------------P--P-----S---------------PRFYDLCDELGILVWQEIPLEGHG 85 (298)
T ss_dssp HHHHHHTT-SEEEETTS-----------------------S---------------HHHHHHHHHHT-EEEEE-S-BSCT
T ss_pred HHHHHhcCcceEEcccc--------------c--C-----c---------------HHHHHHHhhcCCEEEEeccccccC
Confidence 56889999999998322 1 0 0 689999999999998776541 11
Q ss_pred CccccC----CCCCCCCC---hHHHHHHHHHHHHcCc-ccceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 008834 166 RHNIRH----NAWGGAWD---SNNARDFLKYTISMGY-QIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYK 237 (551)
Q Consensus 166 ~~~~~~----~~~~~~W~---~~~A~~~l~y~~~~g~-~i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~ 237 (551)
...... ......|. ..+.+++|+. .+++ .|-.|.+|||+ .+...+.++.+++++.+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~NHPSIi~W~~gNE~-------------~~~~~~~~l~~~~k~~Dp 150 (298)
T PF02836_consen 86 SWQDFGNCNYDADDPEFRENAEQELREMVRR--DRNHPSIIMWSLGNES-------------DYREFLKELYDLVKKLDP 150 (298)
T ss_dssp SSSSTSCTSCTTTSGGHHHHHHHHHHHHHHH--HTT-TTEEEEEEEESS-------------HHHHHHHHHHHHHHHH-T
T ss_pred ccccCCccccCCCCHHHHHHHHHHHHHHHHc--CcCcCchheeecCccC-------------ccccchhHHHHHHHhcCC
Confidence 100000 00001111 1233344442 2333 36699999998 355666778888888887
Q ss_pred C
Q 008834 238 N 238 (551)
Q Consensus 238 ~ 238 (551)
+
T Consensus 151 t 151 (298)
T PF02836_consen 151 T 151 (298)
T ss_dssp T
T ss_pred C
Confidence 6
No 19
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
Probab=91.36 E-value=1.3 Score=45.87 Aligned_cols=197 Identities=19% Similarity=0.240 Sum_probs=90.5
Q ss_pred CcHHHHHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEee
Q 008834 82 SHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLN 161 (551)
Q Consensus 82 ~~~~L~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN 161 (551)
+-..+++++|..+-..+|+ |++. ..+++-...+|+++++++.
T Consensus 14 ~p~~vv~l~ks~~i~~vri---------~d~~-----------------------------~~iL~a~a~S~i~v~v~vp 55 (310)
T PF00332_consen 14 SPCKVVSLLKSNGITKVRI---------YDAD-----------------------------PSILRAFAGSGIEVMVGVP 55 (310)
T ss_dssp -HHHHHHHHHHTT--EEEE---------SS-------------------------------HHHHHHHTTS--EEEEEE-
T ss_pred CHHHHHHHHHhcccccEEe---------ecCc-----------------------------HHHHHHHhcCCceeeeccC
Confidence 4567899999988888876 4332 2333344458999999985
Q ss_pred cCCCCccccCCCCCCCCChHHHHHHHHHHHH---cCcccceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 008834 162 ALHGRHNIRHNAWGGAWDSNNARDFLKYTIS---MGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKN 238 (551)
Q Consensus 162 ~~~~~~~~~~~~~~~~W~~~~A~~~l~y~~~---~g~~i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~~ 238 (551)
-..-. .... +...|..|++--.. ..-+|.+..+|||.-.. ........-.+.+++++++.-
T Consensus 56 N~~l~-~la~-------~~~~A~~Wv~~nv~~~~~~~~i~~i~VGnEv~~~------~~~~~lvpAm~ni~~aL~~~~-- 119 (310)
T PF00332_consen 56 NEDLA-SLAS-------SQSAAGSWVRTNVLPYLPAVNIRYIAVGNEVLTG------TDNAYLVPAMQNIHNALTAAG-- 119 (310)
T ss_dssp GGGHH-HHHH-------HHHHHHHHHHHHTCTCTTTSEEEEEEEEES-TCC------SGGGGHHHHHHHHHHHHHHTT--
T ss_pred hHHHH-Hhcc-------CHHHHhhhhhhcccccCcccceeeeecccccccC------ccceeeccHHHHHHHHHHhcC--
Confidence 11100 0110 23557777763221 12359999999997764 111256666777888887651
Q ss_pred CCCCCeEEcc------------C-CCCCHHH------HHHHHhhhCCCC-cCEEEEeEcCCCCCCCc---chh---hccC
Q 008834 239 SSSKPTILAP------------G-GFFDQEW------YAKFLQVSGSNV-VNGVTHHIYNLGPGVDP---NLV---SKIL 292 (551)
Q Consensus 239 ~~~~~~~vgp------------~-~~~~~~w------~~~fl~~~g~~~-id~vS~H~Y~~~~g~d~---~~~---~~~l 292 (551)
...++++..| + +.+...+ +.+||+..+... ++.+.++-|..++..-+ +.. ....
T Consensus 120 L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~~~~~~~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~ 199 (310)
T PF00332_consen 120 LSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIASVMDPLLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVV 199 (310)
T ss_dssp -TTTSEEEEEEEGGGEEE-SSGGG-EESHHHHHHHHHHHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SE
T ss_pred cCCcceeccccccccccccCCCccCcccccchhhhhHHHHHhhccCCCceeccchhhhccCCcccCCccccccccccccc
Confidence 1124555533 1 1123333 457777766421 12222222221211100 000 0000
Q ss_pred Ch--hHHHHHHHHHHHHHHHHHHhC-CCCcEEEeccccccCCC
Q 008834 293 NP--QRLSRVSETFGNLKQTIEKHG-PWASAWVGESGGAYNSG 332 (551)
Q Consensus 293 ~~--~~l~~~~~~~~~~~~~~~~~~-~~~~~wl~Et~sa~~~G 332 (551)
|+ .|-..+..+++.+...+.+.+ +++++|+||||-...|+
T Consensus 200 D~~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~ETGWPs~G~ 242 (310)
T PF00332_consen 200 DGGLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVGETGWPSAGD 242 (310)
T ss_dssp ETTEEESSHHHHHHHHHHHHHHTTT-TT--EEEEEE---SSSS
T ss_pred ccchhhhHHHHHHHHHHHHHHHHhCCCCceeEEeccccccCCC
Confidence 11 121223345566666666433 57899999999666444
No 20
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=82.21 E-value=25 Score=35.43 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=48.5
Q ss_pred HHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCChHHHHHHHHHHHHcCc-ccceeEeeccCCCCCCCCCCCCHHHH
Q 008834 143 DELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGY-QIDSWEYGNELSGRTSIGASVDAELY 221 (551)
Q Consensus 143 d~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~~~l~y~~~~g~-~i~~wElGNEp~~~~~~g~~~ta~~Y 221 (551)
+.+..-+.+.|.++.+|+=... | ...+.+ -..+..|-...+. .+...-+|||.=.. ...++.|.
T Consensus 90 e~v~pAa~~~g~kv~lGiw~td------d----~~~~~~-~til~ay~~~~~~d~v~~v~VGnEal~r----~~~tasql 154 (305)
T COG5309 90 ENVLPAAEASGFKVFLGIWPTD------D----IHDAVE-KTILSAYLPYNGWDDVTTVTVGNEALNR----NDLTASQL 154 (305)
T ss_pred hhhHHHHHhcCceEEEEEeecc------c----hhhhHH-HHHHHHHhccCCCCceEEEEechhhhhc----CCCCHHHH
Confidence 3344456677889999884321 1 111111 1223344333333 48899999995432 35799999
Q ss_pred HHHHHHHHHHHHHh
Q 008834 222 GKDLINLKNIINEL 235 (551)
Q Consensus 222 a~d~~~~~~~~~~~ 235 (551)
++.....|.++++.
T Consensus 155 ~~~I~~vrsav~~a 168 (305)
T COG5309 155 IEYIDDVRSAVKEA 168 (305)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999865
No 21
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=80.63 E-value=51 Score=34.04 Aligned_cols=127 Identities=18% Similarity=0.236 Sum_probs=55.2
Q ss_pred HHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCChHHHHHHHHHHH-HcCc-ccceeEeeccCCCCCCCCCCCCHHH
Q 008834 143 DELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTI-SMGY-QIDSWEYGNELSGRTSIGASVDAEL 220 (551)
Q Consensus 143 d~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~~~l~y~~-~~g~-~i~~wElGNEp~~~~~~g~~~ta~~ 220 (551)
|++|+.++.+|.=+|+.||.-... +........|+...-....+-.. -.+| ++.++=+|||.-.. . .+..+..
T Consensus 82 d~CM~~~~~aGIYvi~Dl~~p~~s--I~r~~P~~sw~~~l~~~~~~vid~fa~Y~N~LgFf~GNEVin~--~-~~t~aap 156 (314)
T PF03198_consen 82 DECMSAFADAGIYVILDLNTPNGS--INRSDPAPSWNTDLLDRYFAVIDAFAKYDNTLGFFAGNEVIND--A-SNTNAAP 156 (314)
T ss_dssp HHHHHHHHHTT-EEEEES-BTTBS----TTS------HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-S--T-T-GGGHH
T ss_pred HHHHHHHHhCCCEEEEecCCCCcc--ccCCCCcCCCCHHHHHHHHHHHHHhccCCceEEEEecceeecC--C-CCcccHH
Confidence 899999999999999999876432 32223334776544333222211 1334 56799999997653 1 1223444
Q ss_pred HHHHH-HHHHHHHHHhhcCCCCCCeEEccCCCCC---HHHHHHHHhhhCC--CCcCEEEEeEcCC
Q 008834 221 YGKDL-INLKNIINELYKNSSSKPTILAPGGFFD---QEWYAKFLQVSGS--NVVNGVTHHIYNL 279 (551)
Q Consensus 221 Ya~d~-~~~~~~~~~~~~~~~~~~~~vgp~~~~~---~~w~~~fl~~~g~--~~id~vS~H~Y~~ 279 (551)
|.+-+ |..++.|++. ..+..-||-..... ..-+.++|. ++. ..+|.+.+-.|..
T Consensus 157 ~vKAavRD~K~Yi~~~----~~R~IPVGYsaaD~~~~r~~~a~Yl~-Cg~~~~~iDf~g~N~Y~W 216 (314)
T PF03198_consen 157 YVKAAVRDMKAYIKSK----GYRSIPVGYSAADDAEIRQDLANYLN-CGDDDERIDFFGLNSYEW 216 (314)
T ss_dssp HHHHHHHHHHHHHHHS----SS----EEEEE---TTTHHHHHHHTT-BTT-----S-EEEEE---
T ss_pred HHHHHHHHHHHHHHhc----CCCCCceeEEccCChhHHHHHHHHhc-CCCcccccceeeecccee
Confidence 54321 1222233332 12234455443322 233556663 332 2589999999975
No 22
>TIGR03356 BGL beta-galactosidase.
Probab=67.03 E-value=14 Score=39.97 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=65.2
Q ss_pred HHHHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCC
Q 008834 85 LLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALH 164 (551)
Q Consensus 85 ~L~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~ 164 (551)
.=+.+++.+|-..+|++=.++-..- .+.+ .+ . .=.-+..+++.+-+++.|.++|++|.=-.
T Consensus 58 eDi~l~~~~G~~~~R~si~Wsri~p--~g~~-------------~~--n--~~~~~~y~~~i~~l~~~gi~pivtL~Hfd 118 (427)
T TIGR03356 58 EDVALMKELGVDAYRFSIAWPRIFP--EGTG-------------PV--N--PKGLDFYDRLVDELLEAGIEPFVTLYHWD 118 (427)
T ss_pred HHHHHHHHcCCCeEEcccchhhccc--CCCC-------------Cc--C--HHHHHHHHHHHHHHHHcCCeeEEeeccCC
Confidence 3467889999999998655332211 0000 00 0 00124568999999999999999995211
Q ss_pred CCccccCCCCCCCCC-hHHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 165 GRHNIRHNAWGGAWD-SNNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 165 ~~~~~~~~~~~~~W~-~~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
-..... ..|.|. +.....+++|++ ..+..+++|+.=|||+..
T Consensus 119 ~P~~l~---~~gGw~~~~~~~~f~~ya~~~~~~~~d~v~~w~t~NEp~~~ 165 (427)
T TIGR03356 119 LPQALE---DRGGWLNRDTAEWFAEYAAVVAERLGDRVKHWITLNEPWCS 165 (427)
T ss_pred ccHHHH---hcCCCCChHHHHHHHHHHHHHHHHhCCcCCEEEEecCccee
Confidence 110011 125564 456778888874 467789999999999965
No 23
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=61.93 E-value=26 Score=32.78 Aligned_cols=94 Identities=12% Similarity=0.165 Sum_probs=55.6
Q ss_pred hhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCChHHHHHHHHHHH-H--cCcccceeEeeccCCCCCCCCCCC
Q 008834 140 QRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTI-S--MGYQIDSWEYGNELSGRTSIGASV 216 (551)
Q Consensus 140 ~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~~~l~y~~-~--~g~~i~~wElGNEp~~~~~~g~~~ 216 (551)
...+.+++.|++.|.++++||++...--+ . ...+|.......+++... . +.-.+++|=|=+|++.. .+
T Consensus 65 d~l~~~L~~A~~~Gmkv~~Gl~~~~~~w~--~--~~~~~~~~~~~~v~~el~~~yg~h~sf~GWYip~E~~~~-----~~ 135 (166)
T PF14488_consen 65 DLLEMILDAADKYGMKVFVGLYFDPDYWD--Q--GDLDWEAERNKQVADELWQRYGHHPSFYGWYIPYEIDDY-----NW 135 (166)
T ss_pred cHHHHHHHHHHHcCCEEEEeCCCCchhhh--c--cCHHHHHHHHHHHHHHHHHHHcCCCCCceEEEecccCCc-----cc
Confidence 34589999999999999999986432100 0 111221111122222111 1 11258999999999986 12
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCeEEcc
Q 008834 217 DAELYGKDLINLKNIINELYKNSSSKPTILAP 248 (551)
Q Consensus 217 ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp 248 (551)
.. .+.++.+.+.++++.+ .+|..+.|
T Consensus 136 ~~---~~~~~~l~~~lk~~s~---~~Pv~ISp 161 (166)
T PF14488_consen 136 NA---PERFALLGKYLKQISP---GKPVMISP 161 (166)
T ss_pred ch---HHHHHHHHHHHHHhCC---CCCeEEec
Confidence 22 4556677778888754 35777776
No 24
>KOG2566 consensus Beta-glucocerebrosidase [Carbohydrate transport and metabolism]
Probab=59.85 E-value=2.4e+02 Score=30.07 Aligned_cols=55 Identities=15% Similarity=0.304 Sum_probs=36.7
Q ss_pred CccCcchHHHHHHHHhcCCceEEe--ecCCCCceEEEEEEeeCCCcEEEEEEeCCCCC
Q 008834 379 FIPNPDYYSALLWHRLMGKGVLSV--ATDGSSSLRSYAHCSKEREGITLLLINLSNQT 434 (551)
Q Consensus 379 ~~p~P~Yy~~lL~~~l~G~~Vl~~--~~~~~~~l~~YA~c~~~~g~vtl~lIN~~~~~ 434 (551)
|.-.|-||+.--|++++-+....+ ..+.+..|..-|.-. .+|.-++++.|++...
T Consensus 432 fYKQPmfya~~hFSkFl~pGs~Rv~~~i~~~~~ve~~afln-pdGskvvVllnk~s~~ 488 (518)
T KOG2566|consen 432 FYKQPMFYALGHFSKFLPPGSVRVGHSINQNLDVEATAFLN-PDGSKVVVLLNKNSLD 488 (518)
T ss_pred HhhccHHHHHHHHhhcCCCCceEeeeeeccccccceeEEEc-CCCcEEEEEeccCCCC
Confidence 455788999999999985543333 333344455545443 3688889999988766
No 25
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=55.20 E-value=73 Score=33.69 Aligned_cols=56 Identities=18% Similarity=0.228 Sum_probs=33.3
Q ss_pred HHHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecC
Q 008834 86 LANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNAL 163 (551)
Q Consensus 86 L~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~ 163 (551)
-+.++|++|--.+|+|=- .|..= .| +.+.|.| +..|.+++.+++.|.++++++...
T Consensus 15 d~~~m~~~G~n~vri~~~-----~W~~l------EP----~eG~ydF-------~~lD~~l~~a~~~Gi~viL~~~~~ 70 (374)
T PF02449_consen 15 DLRLMKEAGFNTVRIGEF-----SWSWL------EP----EEGQYDF-------SWLDRVLDLAAKHGIKVILGTPTA 70 (374)
T ss_dssp HHHHHHHHT-SEEEE-CC-----EHHHH-------S----BTTB----------HHHHHHHHHHHCTT-EEEEEECTT
T ss_pred HHHHHHHcCCCEEEEEEe-----chhhc------cC----CCCeeec-------HHHHHHHHHHHhccCeEEEEeccc
Confidence 456778889999997531 23210 11 1223433 457999999999999999988533
No 26
>COG4130 Predicted sugar epimerase [Carbohydrate transport and metabolism]
Probab=52.82 E-value=2.4e+02 Score=27.76 Aligned_cols=106 Identities=24% Similarity=0.281 Sum_probs=68.2
Q ss_pred HHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCC---hHHHHHHHHHHHHcCcccceeEeeccCCCCCCCCCCCCHH
Q 008834 143 DELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWD---SNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAE 219 (551)
Q Consensus 143 d~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~---~~~A~~~l~y~~~~g~~i~~wElGNEp~~~~~~g~~~ta~ 219 (551)
.++-..++++|.. |+++|+++.- ..|+ ..+|..+++|+..-|-+-.-.+-=|. +. +.+......
T Consensus 52 a~vka~Aek~Gl~-IvSINAlypF---------n~wt~~~~a~a~~la~yA~acGA~aLvlcPlNd--~s-~~~~~vr~~ 118 (272)
T COG4130 52 AEVKALAEKAGLT-IVSINALYPF---------NEWTEERVAEARGLADYAAACGAKALVLCPLND--GS-WPGTAVRRE 118 (272)
T ss_pred HHHHHHHHHcCcE-EEEeeccccc---------cccChHHHHHHHHHHHHHHhcCCceEEEEeccC--CC-CCCcccchH
Confidence 5677788999987 5689998863 4677 45789999999877765334444454 22 334556777
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCC-----CHHHHHHHHhhhCC
Q 008834 220 LYGKDLINLKNIINELYKNSSSKPTILAPGGFF-----DQEWYAKFLQVSGS 266 (551)
Q Consensus 220 ~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~-----~~~w~~~fl~~~g~ 266 (551)
+...-.+.++.++++..- .-++-|=++. ...|-.+.+.+.++
T Consensus 119 ~lv~AlkaLkpil~~~gi-----~GLVEPLGF~~csLRsk~eA~~aI~aa~g 165 (272)
T COG4130 119 DLVEALKALKPILDEYGI-----TGLVEPLGFRVCSLRSKAEAAEAIRAAGG 165 (272)
T ss_pred HHHHHHHHhhHHHHHhCc-----cccccccCchhhhhhhHHHHHHHHHHhCC
Confidence 888888888888776421 1345554442 33566666655443
No 27
>PF02057 Glyco_hydro_59: Glycosyl hydrolase family 59; InterPro: IPR001286 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 59 GH59 from CAZY comprises enzymes with only one known activity; galactocerebrosidase (3.2.1.46 from EC). Globoid cell leukodystrophy (Krabbe disease) is a severe, autosomal recessive disorder that results from deficiency of galactocerebrosidase (GALC) activity [, , ]. GALC is responsible for the lysosomal catabolism of certain galactolipids, including galactosylceramide and psychosine [].; GO: 0004336 galactosylceramidase activity, 0006683 galactosylceramide catabolic process; PDB: 3ZR6_A 3ZR5_A.
Probab=51.37 E-value=2.5e+02 Score=32.24 Aligned_cols=184 Identities=17% Similarity=0.182 Sum_probs=76.6
Q ss_pred HHcCcccceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCCHHHHHHHHhh-hCCCCc
Q 008834 191 ISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQV-SGSNVV 269 (551)
Q Consensus 191 ~~~g~~i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~~~~~w~~~fl~~-~g~~~i 269 (551)
+.+|..|+|..+-||=. ++ .+|. +.||+.+++. .-.+.+|++.+.... .+-..++.. .-.+.|
T Consensus 168 ~~~gl~idYvg~~NEr~--------~~-~~~i---k~lr~~l~~~---gy~~vkiva~D~~~~-~~~~~m~~D~~l~~av 231 (669)
T PF02057_consen 168 KTHGLDIDYVGIWNERG--------FD-VNYI---KWLRKALNSN---GYNKVKIVAADNNWE-SISDDMLSDPELRNAV 231 (669)
T ss_dssp HHH-----EE-S-TTS------------HHHH---HHHHHHHHHT---T-TT-EEEEEEE-ST-THHHHHHH-HHHHHH-
T ss_pred HHhCCCceEechhhccC--------CC-hhHH---HHHHHHHhhc---cccceEEEEeCCCcc-chhhhhhcCHHHHhcc
Confidence 45799999998888843 23 3565 4677777764 113579999886532 233333321 111158
Q ss_pred CEEEEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccccCCCCCCcchHHHHHHH--HH
Q 008834 270 NGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW--YL 347 (551)
Q Consensus 270 d~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~~G~~~vsdtf~~alw--~l 347 (551)
|++..| |+. .+.. .. . +.. +||+|-+|-.+.++ +-..++-| .+
T Consensus 232 dvig~H-Y~~---~~~~---------------~~---a----~~~--~K~lW~SE~~s~~~-------~~~g~g~~ar~l 276 (669)
T PF02057_consen 232 DVIGYH-YPG---TYSS---------------KN---A----KLT--GKPLWSSEDYSTFN-------YNVGAGCWARIL 276 (669)
T ss_dssp -EEEEE-S-T---T------------------HH---H----HHH--T-EEEEEEEE-S-T-------THHHHHHHHHHH
T ss_pred cEeccc-cCC---CCcH---------------HH---H----HHh--CCCeEEcCCccccc-------CcCchHHHHHHH
Confidence 999999 442 1110 00 0 111 59999999765432 22233333 23
Q ss_pred HHhhhhhccCCeEEEeeeccCCccc--------cccC-----CCCccCcchHHHHHHHHhcCC--ceEEeecCCCCceEE
Q 008834 348 DQLGMSSKYNTKVYCRQTLVGGNYG--------LLNA-----TTFIPNPDYYSALLWHRLMGK--GVLSVATDGSSSLRS 412 (551)
Q Consensus 348 D~Lg~aA~~g~~vv~~qtl~Gg~Y~--------l~~~-----~~~~p~P~Yy~~lL~~~l~G~--~Vl~~~~~~~~~l~~ 412 (551)
++--. .-....++-|.++++-|. |+.- ..+...+..|+..=+.++.-. +-|+. +..-..--.
T Consensus 277 n~~yv--~g~mT~~I~w~lVasyYp~lpy~~~gL~~A~ePWSG~Y~v~~~iWv~AHtTQFt~pGW~YL~~-~G~l~~gGS 353 (669)
T PF02057_consen 277 NRNYV--NGRMTAYINWPLVASYYPGLPYSRKGLMTANEPWSGHYEVDSPIWVTAHTTQFTQPGWRYLDS-VGHLRGGGS 353 (669)
T ss_dssp HHHHH--HH--SEEEEE-SEE-S-TTSTTTT-SSCE---TTT---B--HHHHHHHHHHTT--TT-EEES---EE-TTS-E
T ss_pred Hhhhh--ccceEEEEeehhhhhhcCCCCCCCccceEecCCcccceEecceeeeeeehhccCCCCeEEccC-ccccCCCcc
Confidence 32211 112334567888887763 2211 125667888998888888643 34432 100112235
Q ss_pred EEEEeeCCCcEEEEEE
Q 008834 413 YAHCSKEREGITLLLI 428 (551)
Q Consensus 413 YA~c~~~~g~vtl~lI 428 (551)
|...+.+.|.+++++-
T Consensus 354 YVtLtd~~gn~tiiiE 369 (669)
T PF02057_consen 354 YVTLTDGTGNYTIIIE 369 (669)
T ss_dssp EEEEE-SSS-EEEEEE
T ss_pred eEEeecCCCCceEEEE
Confidence 5555555566766653
No 28
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=51.06 E-value=61 Score=34.28 Aligned_cols=79 Identities=14% Similarity=0.061 Sum_probs=30.5
Q ss_pred HHHHhCCCCcEEEeccccccCC-CCC--CcchHHHHHHHHHHHhhhhhccCCeEEEeeeccC---CccccccCCCCccCc
Q 008834 310 TIEKHGPWASAWVGESGGAYNS-GGR--HVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVG---GNYGLLNATTFIPNP 383 (551)
Q Consensus 310 ~~~~~~~~~~~wl~Et~sa~~~-G~~--~vsdtf~~alw~lD~Lg~aA~~g~~vv~~qtl~G---g~Y~l~~~~~~~p~P 383 (551)
+++....++|+|+.|+.+...+ +.. ...+-. -.+|..-.+...|+.-.---.||...| ..+|+++.+.-.|++
T Consensus 281 l~R~~~~~kpf~v~E~~~g~~~~~~~~~~~~pg~-~~~~~~~~~A~Ga~~i~~~~wr~~~~g~E~~~~g~~~~dg~~~~~ 359 (374)
T PF02449_consen 281 LMRSLAKGKPFWVMEQQPGPVNWRPYNRPPRPGE-LRLWSWQAIAHGADGILFWQWRQSRFGAEQFHGGLVDHDGREPTR 359 (374)
T ss_dssp HHHHHTTT--EEEEEE--S--SSSSS-----TTH-HHHHHHHHHHTT-S-EEEC-SB--SSSTTTTS--SB-TTS--B-H
T ss_pred HHHhhcCCCceEeecCCCCCCCCccCCCCCCCCH-HHHHHHHHHHHhCCeeEeeeccCCCCCchhhhcccCCccCCCCCc
Confidence 3344467899999998653211 111 111112 234555555543322100113455555 356899888546787
Q ss_pred chHHHH
Q 008834 384 DYYSAL 389 (551)
Q Consensus 384 ~Yy~~l 389 (551)
.|.-..
T Consensus 360 ~~~e~~ 365 (374)
T PF02449_consen 360 RYREVA 365 (374)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776544
No 29
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis]
Probab=46.40 E-value=3.4e+02 Score=28.90 Aligned_cols=44 Identities=14% Similarity=0.190 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCChHHHHHHHHHH
Q 008834 139 MQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYT 190 (551)
Q Consensus 139 ~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~~~l~y~ 190 (551)
..++.+=.+-|+..|.|+++.|--+.|.+... +.++|.-+..|.
T Consensus 89 CTqi~~di~~CQS~GiKVlLSLGG~~GnYs~~--------~d~dA~~fA~~L 132 (568)
T KOG4701|consen 89 CTQIETDIQVCQSNGIKVLLSLGGYNGNYSLN--------NDDDATNFAFQL 132 (568)
T ss_pred cchhhhHHHHHHhcCeEEEEeccCcccceeec--------cchhHHHHHHHH
Confidence 34556667889999999999986666655443 235566665553
No 30
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=45.57 E-value=51 Score=36.32 Aligned_cols=102 Identities=11% Similarity=0.115 Sum_probs=64.3
Q ss_pred HHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCC
Q 008834 87 ANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGR 166 (551)
Q Consensus 87 ~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~ 166 (551)
+.|++.||--..|++=.++=- .|..... .+ +. =.-+..+.+.+-+.+.|.+|+++|.=-.-.
T Consensus 75 I~Lm~elG~~~yRfSIsWsRI---~P~G~~~--~~------N~-------~gl~~Y~~lid~l~~~GI~P~vTL~H~dlP 136 (477)
T PRK15014 75 IKLFAEMGFKCFRTSIAWTRI---FPKGDEA--QP------NE-------EGLKFYDDMFDELLKYNIEPVITLSHFEMP 136 (477)
T ss_pred HHHHHHcCCCEEEecccceee---ccCCCCC--CC------CH-------HHHHHHHHHHHHHHHcCCEEEEEeeCCCCC
Confidence 678899999888886553221 1110000 00 00 012345888999999999999999521111
Q ss_pred ccccCCCCCCCC-ChHHHHHHHHHH----HHcCcccceeEeeccCCC
Q 008834 167 HNIRHNAWGGAW-DSNNARDFLKYT----ISMGYQIDSWEYGNELSG 208 (551)
Q Consensus 167 ~~~~~~~~~~~W-~~~~A~~~l~y~----~~~g~~i~~wElGNEp~~ 208 (551)
.... ..-|.| +++.+..+++|| +..|.+|++|--=|||+.
T Consensus 137 ~~L~--~~yGGW~n~~~~~~F~~Ya~~~f~~fgdrVk~WiT~NEp~~ 181 (477)
T PRK15014 137 LHLV--QQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINN 181 (477)
T ss_pred HHHH--HhcCCCCChHHHHHHHHHHHHHHHHhcCcCCEEEEecCccc
Confidence 0010 011678 566788889997 467889999999999984
No 31
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=44.26 E-value=1.1e+02 Score=37.34 Aligned_cols=82 Identities=17% Similarity=0.093 Sum_probs=43.5
Q ss_pred HHHHHHHHhcCCEEEEEeecCC-CCccccCCCCCCCCChHHHHHHHHHH--HHcCcc-cceeEeeccCCCCCCCCCCCCH
Q 008834 143 DELNQLFNRTRAIVSFGLNALH-GRHNIRHNAWGGAWDSNNARDFLKYT--ISMGYQ-IDSWEYGNELSGRTSIGASVDA 218 (551)
Q Consensus 143 d~~~~f~~~~G~~~i~glN~~~-~~~~~~~~~~~~~W~~~~A~~~l~y~--~~~g~~-i~~wElGNEp~~~~~~g~~~ta 218 (551)
+.|+++|.+.|.-++=-.|+.. +-.....-.....|.. ...+-++.. +.+++. |..|.+|||+.. +
T Consensus 397 p~fydlcDe~GilV~dE~~~e~hg~~~~~~~~~dp~~~~-~~~~~~~~mV~RdrNHPSIi~WSlgNE~~~----g----- 466 (1027)
T PRK09525 397 PLWYELCDRYGLYVVDEANIETHGMVPMNRLSDDPRWLP-AMSERVTRMVQRDRNHPSIIIWSLGNESGH----G----- 466 (1027)
T ss_pred HHHHHHHHHcCCEEEEecCccccCCccccCCCCCHHHHH-HHHHHHHHHHHhCCCCCEEEEEeCccCCCc----C-----
Confidence 6889999999998887666521 1000000000112321 111212222 123443 779999999742 1
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q 008834 219 ELYGKDLINLKNIINELYKN 238 (551)
Q Consensus 219 ~~Ya~d~~~~~~~~~~~~~~ 238 (551)
..+.++.+++|+.+|+
T Consensus 467 ----~~~~~l~~~~k~~Dpt 482 (1027)
T PRK09525 467 ----ANHDALYRWIKSNDPS 482 (1027)
T ss_pred ----hhHHHHHHHHHhhCCC
Confidence 1245677888888765
No 32
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=40.75 E-value=97 Score=37.64 Aligned_cols=81 Identities=12% Similarity=0.156 Sum_probs=44.8
Q ss_pred HHHHHHHHhcCCEEEEEeecCCCCcc-ccC--C-CCCCCCCh---HHHHHHHHHHHHcCcc-cceeEeeccCCCCCCCCC
Q 008834 143 DELNQLFNRTRAIVSFGLNALHGRHN-IRH--N-AWGGAWDS---NNARDFLKYTISMGYQ-IDSWEYGNELSGRTSIGA 214 (551)
Q Consensus 143 d~~~~f~~~~G~~~i~glN~~~~~~~-~~~--~-~~~~~W~~---~~A~~~l~y~~~~g~~-i~~wElGNEp~~~~~~g~ 214 (551)
..|++.|.+.|.-++=-.|+...... ..+ . .....|.. .+++++++. .+++. |..|.+|||...
T Consensus 381 ~~fydlcDe~GllV~dE~~~e~~g~~~~~~~~~~~~~p~~~~~~~~~~~~mV~R--drNHPSIi~WslGNE~~~------ 452 (1021)
T PRK10340 381 PRFYELCDIYGLFVMAETDVESHGFANVGDISRITDDPQWEKVYVDRIVRHIHA--QKNHPSIIIWSLGNESGY------ 452 (1021)
T ss_pred HHHHHHHHHCCCEEEECCcccccCcccccccccccCCHHHHHHHHHHHHHHHHh--CCCCCEEEEEECccCccc------
Confidence 68899999999988765553211000 000 0 00012311 223333332 23443 779999999632
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcC
Q 008834 215 SVDAELYGKDLINLKNIINELYKN 238 (551)
Q Consensus 215 ~~ta~~Ya~d~~~~~~~~~~~~~~ 238 (551)
+..+.++.+++|+.+|+
T Consensus 453 -------g~~~~~~~~~~k~~Dpt 469 (1021)
T PRK10340 453 -------GCNIRAMYHAAKALDDT 469 (1021)
T ss_pred -------cHHHHHHHHHHHHhCCC
Confidence 22456788888888765
No 33
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=39.21 E-value=66 Score=35.43 Aligned_cols=103 Identities=10% Similarity=0.031 Sum_probs=66.1
Q ss_pred HHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCC
Q 008834 87 ANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGR 166 (551)
Q Consensus 87 ~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~ 166 (551)
+.+++.||-...|++=+++=. .|..... .+ +. -.-+..+.+.+-+++.|.+|+++|+--.-+
T Consensus 77 i~l~~~lG~~~yR~si~WsRi---~P~g~~~--~~------n~-------~~~~~Y~~~i~~l~~~gi~p~VtL~H~~~P 138 (474)
T PRK09852 77 IALMAEMGFKVFRTSIAWSRL---FPQGDEL--TP------NQ-------QGIAFYRSVFEECKKYGIEPLVTLCHFDVP 138 (474)
T ss_pred HHHHHHcCCCeEEeeceeeee---eeCCCCC--CC------CH-------HHHHHHHHHHHHHHHcCCEEEEEeeCCCCC
Confidence 578899999999986553321 1210000 00 00 112456899999999999999999743221
Q ss_pred ccccCCCCCCCCCh-HHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 167 HNIRHNAWGGAWDS-NNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 167 ~~~~~~~~~~~W~~-~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
.... ..-|.|.. ..+..+++|++ ..|..|++|--=|||+.+
T Consensus 139 ~~l~--~~~GGW~~~~~~~~F~~ya~~~~~~fgd~Vk~WiTfNEPn~~ 184 (474)
T PRK09852 139 MHLV--TEYGSWRNRKMVEFFSRYARTCFEAFDGLVKYWLTFNEINIM 184 (474)
T ss_pred HHHH--HhcCCCCCHHHHHHHHHHHHHHHHHhcCcCCeEEeecchhhh
Confidence 1110 01267865 45677888873 578899999999999954
No 34
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This entry represents the all-beta domain that is found in several alpha-amylases, usually at the C terminus, and which forms a Greek key beta-barrel fold in these enzymes []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 1TCM_A 1CXL_A 1PJ9_A 1OT2_A 2DIJ_A 1CGV_A 1CXK_A 1PEZ_A 1CGX_A 2CXG_A ....
Probab=38.70 E-value=36 Score=28.07 Aligned_cols=15 Identities=7% Similarity=0.107 Sum_probs=12.6
Q ss_pred CceEEccceEEEEEe
Q 008834 527 SPIYITHLSIAFIVF 541 (551)
Q Consensus 527 ~~i~lpp~S~~F~vi 541 (551)
..|+|||+|...+.+
T Consensus 79 ~~~~lp~~s~~vl~~ 93 (95)
T PF02806_consen 79 ITVTLPPYSALVLKL 93 (95)
T ss_dssp EEEEESTTEEEEEEE
T ss_pred EEEEECCCEEEEEEE
Confidence 479999999988765
No 35
>PLN02849 beta-glucosidase
Probab=36.37 E-value=71 Score=35.48 Aligned_cols=68 Identities=18% Similarity=0.191 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCC-hHHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 140 QRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWD-SNNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 140 ~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~-~~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
...+++.+-+.+.|.+|+++|.=-.-+....+ .-|.|. .+.+..+++||+ ..|.+|++|--=|||+.+
T Consensus 119 ~fY~~lid~l~~~GI~P~VTL~H~dlP~~L~~--~yGGW~nr~~v~~F~~YA~~~f~~fgDrVk~WiT~NEP~~~ 191 (503)
T PLN02849 119 QFYKNFIQELVKHGIEPHVTLFHYDHPQYLED--DYGGWINRRIIKDFTAYADVCFREFGNHVKFWTTINEANIF 191 (503)
T ss_pred HHHHHHHHHHHHcCCeEEEeecCCCCcHHHHH--hcCCcCCchHHHHHHHHHHHHHHHhcCcCCEEEEecchhhh
Confidence 44588899999999999999851111100100 016775 456788899974 578999999999999964
No 36
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=35.16 E-value=78 Score=34.87 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=63.5
Q ss_pred HHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCC
Q 008834 87 ANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGR 166 (551)
Q Consensus 87 ~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~ 166 (551)
+.|++.||-...|++=+++=-. |..... .+ +. =.-...+.+.+-+.+.|.+|+++|.=-.-+
T Consensus 73 i~Lm~~lG~~~yRfSIsWsRI~---P~G~~~--~~------N~-------~gl~~Y~~lid~L~~~GI~P~VTL~H~dlP 134 (476)
T PRK09589 73 IALFAEMGFKCFRTSIAWTRIF---PQGDEL--EP------NE-------EGLQFYDDLFDECLKQGIEPVVTLSHFEMP 134 (476)
T ss_pred HHHHHHcCCCEEEeccchhhcC---cCCCCC--CC------CH-------HHHHHHHHHHHHHHHcCCEEEEEecCCCCC
Confidence 6788999988888754422110 100000 00 00 012345888889999999999999521111
Q ss_pred ccccCCCCCCCCCh-HHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 167 HNIRHNAWGGAWDS-NNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 167 ~~~~~~~~~~~W~~-~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
....+ .-|.|.. +.+..+++||+ ..|.+|++|--=|||+..
T Consensus 135 ~~L~~--~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~WiT~NEp~~~ 180 (476)
T PRK09589 135 YHLVT--EYGGWRNRKLIDFFVRFAEVVFTRYKDKVKYWMTFNEINNQ 180 (476)
T ss_pred HHHHH--hcCCcCChHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhh
Confidence 00100 1167854 55788899974 578999999999999853
No 37
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=34.06 E-value=86 Score=34.48 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=63.6
Q ss_pred HHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCC
Q 008834 87 ANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGR 166 (551)
Q Consensus 87 ~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~ 166 (551)
+.|++.||-..-|++=+++=-.- .+. . .+ +. =.-+..+++.+-+.+.|.+|+++|.=-.-.
T Consensus 60 i~L~~~lG~~~yRfSIsWsRI~P--~G~--g--~v------N~-------~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP 120 (469)
T PRK13511 60 LKLAEEFGVNGIRISIAWSRIFP--DGY--G--EV------NP-------KGVEYYHRLFAECHKRHVEPFVTLHHFDTP 120 (469)
T ss_pred HHHHHHhCCCEEEeeccHhhcCc--CCC--C--Cc------CH-------HHHHHHHHHHHHHHHcCCEEEEEecCCCCc
Confidence 58889999888887544221100 000 0 00 00 112456899999999999999999621111
Q ss_pred ccccCCCCCCCCCh-HHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 167 HNIRHNAWGGAWDS-NNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 167 ~~~~~~~~~~~W~~-~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
.... ..|.|.. +.+..+++||+ ..|. |++|--=|||+.+
T Consensus 121 ~~L~---~~GGW~n~~~v~~F~~YA~~~~~~fgd-Vk~W~T~NEP~~~ 164 (469)
T PRK13511 121 EALH---SNGDWLNRENIDHFVRYAEFCFEEFPE-VKYWTTFNEIGPI 164 (469)
T ss_pred HHHH---HcCCCCCHHHHHHHHHHHHHHHHHhCC-CCEEEEccchhhh
Confidence 1111 1367754 56788889974 5788 9999999999865
No 38
>KOG0564 consensus 5,10-methylenetetrahydrofolate reductase [Amino acid transport and metabolism]
Probab=32.81 E-value=1.2e+02 Score=33.19 Aligned_cols=129 Identities=15% Similarity=0.161 Sum_probs=66.6
Q ss_pred CCeeEEEeeccCCCCCCCCCCCCCCCccchhcccccccccCCcHHHHHHHHHcCCceEec----CCcccceeeEecCCCC
Q 008834 41 EHFICATVDWWPHDKCNYNHCPWGNSSVINLLHAIWYFQDLSHPLLANAIQAFQSLRIRI----GGSLQDQVLYDVGDLK 116 (551)
Q Consensus 41 ~~f~g~sie~wp~~~~~y~~~~wg~~s~~nl~~~g~~~~dl~~~~L~~l~k~L~p~~LRi----GG~~~D~~~~~~~~~~ 116 (551)
..=.-+++||+|+-. ..++.|+ .++...|...+-|.++-+ ||++++....-.+..+
T Consensus 14 ~g~~~~S~EfFpPkT---------~~Gv~NL-----------~~R~dRm~~~g~P~FvdvTWgagG~ta~~s~~ias~~q 73 (590)
T KOG0564|consen 14 SGKTAFSFEFFPPKT---------EAGVPNL-----------YERMDRMSEGGPPTFVDVTWGAGGSTAELSLGIASSAQ 73 (590)
T ss_pred ccCceeEEEecCccc---------ccccccH-----------HHHHHHHHhcCCCeEEEEEecCCCCcccccHHHHHHHH
Confidence 334457889988732 1233333 345677776666888764 6655543332222111
Q ss_pred CCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCChHH-----HHHHHHHHH
Q 008834 117 APCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNN-----ARDFLKYTI 191 (551)
Q Consensus 117 ~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~-----A~~~l~y~~ 191 (551)
..|. .+.-+- -+=.....+.-|.-++-|+..|.+=|+.| .|. .+- .+..|...+ |.++++|.+
T Consensus 74 ~~~~----v~t~mH-lTCtn~~~~~Id~aLe~a~~~GirNILAL---RGD--pP~--g~d~~~~~e~gF~yA~DLVr~Ir 141 (590)
T KOG0564|consen 74 NVCG----LETCMH-LTCTNMPKEMIDKALEQAKALGIRNILAL---RGD--PPI--GQDKWVEEEGGFRYAVDLVRYIR 141 (590)
T ss_pred HhcC----ccceee-eeccCccHHHHHHHHHHHHHhCchhhhhh---cCC--CCC--CccccccccCCchhHHHHHHHHH
Confidence 1110 000000 00012334556778888999999988865 221 111 123466555 999999987
Q ss_pred HcCcccceeEee
Q 008834 192 SMGYQIDSWEYG 203 (551)
Q Consensus 192 ~~g~~i~~wElG 203 (551)
++-. +++.||
T Consensus 142 s~YG--DyF~Ig 151 (590)
T KOG0564|consen 142 SKYG--DYFCIG 151 (590)
T ss_pred HHhC--CeEEEE
Confidence 6422 245554
No 39
>PLN02814 beta-glucosidase
Probab=32.66 E-value=84 Score=34.89 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=63.4
Q ss_pred HHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCC
Q 008834 87 ANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGR 166 (551)
Q Consensus 87 ~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~ 166 (551)
+.|+|.||-..-|++=.++=-.- .+.+ .+ + .=.-...+.+.+-+.+.|.+|+++|.=-.-+
T Consensus 83 I~L~k~lG~~ayRfSIsWsRI~P--~G~g----~~---N----------~~Gl~fY~~lId~l~~~GI~P~VTL~H~dlP 143 (504)
T PLN02814 83 VKLMAEMGLESFRFSISWSRLIP--NGRG----LI---N----------PKGLLFYKNLIKELRSHGIEPHVTLYHYDLP 143 (504)
T ss_pred HHHHHHcCCCEEEEeccHhhcCc--CCCC----CC---C----------HHHHHHHHHHHHHHHHcCCceEEEecCCCCC
Confidence 67889999888887544322100 0000 00 0 0112455888899999999999998511111
Q ss_pred ccccCCCCCCCCCh-HHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 167 HNIRHNAWGGAWDS-NNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 167 ~~~~~~~~~~~W~~-~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
....+ .-|.|.. +.+..+++||+ ..|.+|++|--=|||+..
T Consensus 144 ~~L~~--~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~WiT~NEP~~~ 189 (504)
T PLN02814 144 QSLED--EYGGWINRKIIEDFTAFADVCFREFGEDVKLWTTINEATIF 189 (504)
T ss_pred HHHHH--hcCCcCChhHHHHHHHHHHHHHHHhCCcCCEEEeccccchh
Confidence 00100 0167754 56778889974 578999999999999965
No 40
>smart00632 Aamy_C Aamy_C domain.
Probab=31.39 E-value=2.7e+02 Score=22.33 Aligned_cols=20 Identities=20% Similarity=0.132 Sum_probs=13.5
Q ss_pred EEEEEeeCCCcEEEEEEeCCCCC
Q 008834 412 SYAHCSKEREGITLLLINLSNQT 434 (551)
Q Consensus 412 ~YA~c~~~~g~vtl~lIN~~~~~ 434 (551)
+||.+. |...+++||++...
T Consensus 10 ~laF~R---g~~g~VaiN~~~~~ 29 (81)
T smart00632 10 QIAFER---GSKGFVAINRSDSD 29 (81)
T ss_pred EEEEEC---CCeEEEEEECCCCc
Confidence 555442 56788899998753
No 41
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=30.25 E-value=1.2e+02 Score=33.48 Aligned_cols=68 Identities=9% Similarity=0.073 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCCh-HHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 140 QRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDS-NNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 140 ~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~-~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
...+.+.+-+.+.|.+|+++|.=-.-..... ..-|.|.. +.+..+++||+ ..|.+|++|--=|||+.+
T Consensus 114 ~~Y~~lId~L~~~GI~P~VTL~H~dlP~~L~--~~~GGW~n~~~v~~F~~YA~~~~~~fgdrVk~WiT~NEP~~~ 186 (478)
T PRK09593 114 QFYEDIFKECHKYGIEPLVTITHFDCPMHLI--EEYGGWRNRKMVGFYERLCRTLFTRYKGLVKYWLTFNEINMI 186 (478)
T ss_pred HHHHHHHHHHHHcCCEEEEEecccCCCHHHH--hhcCCCCChHHHHHHHHHHHHHHHHhcCcCCEEEeecchhhh
Confidence 4558899999999999999995111110000 01267864 45778888974 579999999999999964
No 42
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=29.30 E-value=1.2e+02 Score=33.45 Aligned_cols=100 Identities=12% Similarity=0.152 Sum_probs=63.0
Q ss_pred HHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecCCCC
Q 008834 87 ANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGR 166 (551)
Q Consensus 87 ~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~ 166 (551)
+.|+++||-...|++=+++=- + |. +.. ++ ++ =.-...+.+.+-+.+.|.+|+++|.=-.-.
T Consensus 59 i~L~~~lG~~~yRfSIsWsRI--~-P~-g~~---~~--N~----------~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP 119 (467)
T TIGR01233 59 LELAEEYGVNGIRISIAWSRI--F-PT-GYG---EV--NE----------KGVEFYHKLFAECHKRHVEPFVTLHHFDTP 119 (467)
T ss_pred HHHHHHcCCCEEEEecchhhc--c-CC-CCC---Cc--CH----------HHHHHHHHHHHHHHHcCCEEEEeccCCCCc
Confidence 578899999888885443221 0 10 000 00 00 112456888888999999999998621111
Q ss_pred ccccCCCCCCCCCh-HHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 167 HNIRHNAWGGAWDS-NNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 167 ~~~~~~~~~~~W~~-~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
.... ..|.|.. +.+..+++||+ ..|. |++|--=|||+.+
T Consensus 120 ~~L~---~~GGW~n~~~v~~F~~YA~~~f~~fgd-Vk~WiT~NEP~~~ 163 (467)
T TIGR01233 120 EALH---SNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPI 163 (467)
T ss_pred HHHH---HcCCCCCHHHHHHHHHHHHHHHHHhCC-CCEEEEecchhhh
Confidence 1111 1367864 56778888974 4675 9999999999965
No 43
>PLN02998 beta-glucosidase
Probab=29.25 E-value=97 Score=34.37 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCC-hHHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 140 QRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWD-SNNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 140 ~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~-~~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
+..+.+.+-+.+.|.+|+++|.=-.-.....+ .-|.|. .+.+..+++||+ ..|.+|++|--=|||+.+
T Consensus 122 ~~Y~~lid~L~~~GIeP~VTL~H~dlP~~L~~--~yGGW~n~~~v~~F~~YA~~~~~~fgdrVk~WiT~NEP~~~ 194 (497)
T PLN02998 122 QYYNNLIDELITHGIQPHVTLHHFDLPQALED--EYGGWLSQEIVRDFTAYADTCFKEFGDRVSHWTTINEVNVF 194 (497)
T ss_pred HHHHHHHHHHHHcCCceEEEecCCCCCHHHHH--hhCCcCCchHHHHHHHHHHHHHHHhcCcCCEEEEccCcchh
Confidence 45588888999999999999851111100100 016675 456778899974 578999999999999965
No 44
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
Probab=28.81 E-value=1.2e+02 Score=35.80 Aligned_cols=60 Identities=15% Similarity=0.227 Sum_probs=35.5
Q ss_pred HHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCChHHHHHHHHHHH--HcCc-ccceeEeeccCCC
Q 008834 143 DELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTI--SMGY-QIDSWEYGNELSG 208 (551)
Q Consensus 143 d~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~~~l~y~~--~~g~-~i~~wElGNEp~~ 208 (551)
++|+++|.+.|.=||=-.|...-. .++ ...| ..++.+-+++-. .++. .|--|.+|||...
T Consensus 347 ~~~ydLcDelGllV~~Ea~~~~~~--~~~---~~~~-~k~~~~~i~~mver~knHPSIiiWs~gNE~~~ 409 (808)
T COG3250 347 EEFYDLCDELGLLVIDEAMIETHG--MPD---DPEW-RKEVSEEVRRMVERDRNHPSIIIWSLGNESGH 409 (808)
T ss_pred HHHHHHHHHhCcEEEEecchhhcC--CCC---Ccch-hHHHHHHHHHHHHhccCCCcEEEEeccccccC
Confidence 789999999999998776654321 111 1223 333333333322 2222 3669999999663
No 45
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=27.47 E-value=73 Score=34.79 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=60.3
Q ss_pred HHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccc---hhhHHHHHHHHHhcCCEEEEEeecC
Q 008834 87 ANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLH---MQRWDELNQLFNRTRAIVSFGLNAL 163 (551)
Q Consensus 87 ~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt---~~~wd~~~~f~~~~G~~~i~glN~~ 163 (551)
+.|+++||....|++=+ |.- ..|. + . .+.+. -...+++.+-+++.|.+|+++|.=-
T Consensus 64 i~l~~~lg~~~yRfsi~------W~R---i~P~-------g-~----~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~ 122 (455)
T PF00232_consen 64 IALMKELGVNAYRFSIS------WSR---IFPD-------G-F----EGKVNEEGLDFYRDLIDELLENGIEPIVTLYHF 122 (455)
T ss_dssp HHHHHHHT-SEEEEE--------HHH---HSTT-------S-S----SSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS
T ss_pred HHHHHhhccceeeeecc------hhh---eeec-------c-c----ccccCHhHhhhhHHHHHHHHhhccceeeeeeec
Confidence 67889999888887433 321 0010 0 0 01122 2345888888999999999999622
Q ss_pred CCCccccCCCCCCCCC-hHHHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 164 HGRHNIRHNAWGGAWD-SNNARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 164 ~~~~~~~~~~~~~~W~-~~~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
.-.....+ .|.|. .+.+..+++||+ ..|..|++|--=|||+..
T Consensus 123 ~~P~~l~~---~ggw~~~~~~~~F~~Ya~~~~~~~gd~V~~w~T~NEp~~~ 170 (455)
T PF00232_consen 123 DLPLWLED---YGGWLNRETVDWFARYAEFVFERFGDRVKYWITFNEPNVF 170 (455)
T ss_dssp --BHHHHH---HTGGGSTHHHHHHHHHHHHHHHHHTTTBSEEEEEETHHHH
T ss_pred ccccceee---cccccCHHHHHHHHHHHHHHHHHhCCCcceEEecccccee
Confidence 11111100 25674 567788899974 578889999999999864
No 46
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=26.89 E-value=1.1e+02 Score=31.04 Aligned_cols=65 Identities=8% Similarity=-0.029 Sum_probs=38.8
Q ss_pred ccchhhHHHHHHHHHhcCCEEEEEeecCCCCcc-ccCCCCCCCCChHHHHHHHHHHHHcCcccceeE
Q 008834 136 CLHMQRWDELNQLFNRTRAIVSFGLNALHGRHN-IRHNAWGGAWDSNNARDFLKYTISMGYQIDSWE 201 (551)
Q Consensus 136 ~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~-~~~~~~~~~W~~~~A~~~l~y~~~~g~~i~~wE 201 (551)
.++.+....+.+||.+-|++-++- |.+=.... ..+.+....+......++++|++++|..|..|-
T Consensus 28 g~~t~~~k~yIDfAa~~G~eYvlv-D~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~KgVgi~lw~ 93 (273)
T PF10566_consen 28 GATTETQKRYIDFAAEMGIEYVLV-DAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKGVGIWLWY 93 (273)
T ss_dssp SSSHHHHHHHHHHHHHTT-SEEEE-BTTCCGS--TTT--TT-B-TT--HHHHHHHHHHTT-EEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEe-ccccccccccccccccccCCccCHHHHHHHHHHcCCCEEEEE
Confidence 457778899999999999998875 44321000 000011122334678899999999998887774
No 47
>PF07417 Crl: Transcriptional regulator Crl; InterPro: IPR009986 This family contains the bacterial transcriptional regulator Crl (approximately 130 residues long). This is a transcriptional regulator of the csgA curlin subunit gene for curli fibres that are found on the surface of certain bacteria [].These proteins bind to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. They also stimulate RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32.; GO: 0016987 sigma factor activity, 0045893 positive regulation of transcription, DNA-dependent, 0005737 cytoplasm; PDB: 3RPJ_A.
Probab=24.97 E-value=54 Score=29.04 Aligned_cols=30 Identities=23% Similarity=0.450 Sum_probs=22.9
Q ss_pred CcHHHHHHHHHcCCceEecCCcccceeeEec
Q 008834 82 SHPLLANAIQAFQSLRIRIGGSLQDQVLYDV 112 (551)
Q Consensus 82 ~~~~L~~l~k~L~p~~LRiGG~~~D~~~~~~ 112 (551)
++-+|+...++||| |||=+=+..|+++||=
T Consensus 6 ~~~RLlk~f~alGP-YlRE~qc~e~~ffFDC 35 (125)
T PF07417_consen 6 THSRLLKKFAALGP-YLREGQCQEDRFFFDC 35 (125)
T ss_dssp -HHHHHHHHHTT-T-TB-GGG-BTTEEEEEE
T ss_pred chHHHHHHHHhhCc-hhcccccccCcEeeec
Confidence 46678898999998 9999999999999973
No 48
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=24.70 E-value=7.8e+02 Score=25.36 Aligned_cols=221 Identities=12% Similarity=0.074 Sum_probs=100.0
Q ss_pred cchhhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCC--CCChHH---HHHHH-HHH----HHcC--cccceeEeec
Q 008834 137 LHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGG--AWDSNN---ARDFL-KYT----ISMG--YQIDSWEYGN 204 (551)
Q Consensus 137 lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~--~W~~~~---A~~~l-~y~----~~~g--~~i~~wElGN 204 (551)
++-+.-|.+++||++.|.++---.=+=.. ++++ +... .+++.+ .++.+ +|. ...+ .+|++|.+=|
T Consensus 56 ~~~~~~D~~~~~a~~~g~~vrGH~LvW~~--~~P~-w~~~~~~~~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvN 132 (320)
T PF00331_consen 56 FNFESADAILDWARENGIKVRGHTLVWHS--QTPD-WVFNLANGSPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVN 132 (320)
T ss_dssp EE-HHHHHHHHHHHHTT-EEEEEEEEESS--SS-H-HHHTSTTSSBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEE
T ss_pred cCccchhHHHHHHHhcCcceeeeeEEEcc--cccc-eeeeccCCCcccHHHHHHHHHHHHHHHHhHhccccceEEEEEee
Confidence 34456699999999999987633211111 1221 1111 234332 22222 332 2344 5799999999
Q ss_pred cCCCCCCC--CCCCC------HHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCC--CC------HHHHHHHHhhhCCCC
Q 008834 205 ELSGRTSI--GASVD------AELYGKDLINLKNIINELYKNSSSKPTILAPGGF--FD------QEWYAKFLQVSGSNV 268 (551)
Q Consensus 205 Ep~~~~~~--g~~~t------a~~Ya~d~~~~~~~~~~~~~~~~~~~~~vgp~~~--~~------~~w~~~fl~~~g~~~ 268 (551)
||=...+. +-+-+ +.+|.+++-+++ ++.+|+ .+++==+-. .. ....+.+. +.|..
T Consensus 133 E~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A---~~~~P~----a~L~~NDy~~~~~~k~~~~~~lv~~l~-~~gvp- 203 (320)
T PF00331_consen 133 EAIDDDGNPGGLRDSPWYDALGPDYIADAFRAA---READPN----AKLFYNDYNIESPAKRDAYLNLVKDLK-ARGVP- 203 (320)
T ss_dssp S-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHH---HHHHTT----SEEEEEESSTTSTHHHHHHHHHHHHHH-HTTHC-
T ss_pred ecccCCCccccccCChhhhcccHhHHHHHHHHH---HHhCCC----cEEEeccccccchHHHHHHHHHHHHHH-hCCCc-
Confidence 98654221 10111 134555444333 344554 344421110 01 12334433 34543
Q ss_pred cCEEEEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccccCCCCCCcchHHHHHHHHHH
Q 008834 269 VNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLD 348 (551)
Q Consensus 269 id~vS~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~~G~~~vsdtf~~alw~lD 348 (551)
||++-+...... +. + + +.+...++.+ ..-+.+++|+|..-......+.....-..|-++-+
T Consensus 204 IdgIG~Q~H~~~-~~-~--------~---~~i~~~l~~~------~~~Gl~i~ITElDv~~~~~~~~~~~~~~qA~~~~~ 264 (320)
T PF00331_consen 204 IDGIGLQSHFDA-GY-P--------P---EQIWNALDRF------ASLGLPIHITELDVRDDDNPPDAEEEEAQAEYYRD 264 (320)
T ss_dssp S-EEEEEEEEET-TS-S--------H---HHHHHHHHHH------HTTTSEEEEEEEEEESSSTTSCHHHHHHHHHHHHH
T ss_pred cceechhhccCC-CC-C--------H---HHHHHHHHHH------HHcCCceEEEeeeecCCCCCcchHHHHHHHHHHHH
Confidence 999887332211 11 1 1 1112222222 13469999999865443222111222345667778
Q ss_pred HhhhhhccC---CeEEEeeec------cCC---cc-ccccCCCCccCcchHHHH
Q 008834 349 QLGMSSKYN---TKVYCRQTL------VGG---NY-GLLNATTFIPNPDYYSAL 389 (551)
Q Consensus 349 ~Lg~aA~~g---~~vv~~qtl------~Gg---~Y-~l~~~~~~~p~P~Yy~~l 389 (551)
.+-+.-++. +..+.--.+ .+. ++ .|+|.+ +.|.|.||+.+
T Consensus 265 ~~~~~~~~~~~~v~git~Wg~~D~~sW~~~~~~~~~~lfd~~-~~~Kpa~~~~~ 317 (320)
T PF00331_consen 265 FLTACFSHPPAAVEGITWWGFTDGYSWRPDTPPDRPLLFDED-YQPKPAYDAIV 317 (320)
T ss_dssp HHHHHHHTTHCTEEEEEESSSBTTGSTTGGHSEG--SSB-TT-SBB-HHHHHHH
T ss_pred HHHHHHhCCccCCCEEEEECCCCCCcccCCCCCCCCeeECCC-cCCCHHHHHHH
Confidence 777766665 443321111 111 12 355666 88999998764
No 49
>PRK10984 DNA-binding transcriptional regulator Crl; Provisional
Probab=23.78 E-value=65 Score=28.66 Aligned_cols=31 Identities=16% Similarity=0.312 Sum_probs=26.6
Q ss_pred CCcHHHHHHHHHcCCceEecCCcccceeeEec
Q 008834 81 LSHPLLANAIQAFQSLRIRIGGSLQDQVLYDV 112 (551)
Q Consensus 81 l~~~~L~~l~k~L~p~~LRiGG~~~D~~~~~~ 112 (551)
-++-+|+...++||| |||=+=+..|+++||=
T Consensus 7 ~~~~RLlk~f~alGP-YlRE~qc~e~~ffFDC 37 (127)
T PRK10984 7 HPKSRLIKKFTALGP-YLREGQCEENRFFFDC 37 (127)
T ss_pred CCchHHHHHHHHhCc-hhchhcccCCCEEeee
Confidence 356678899999998 9999999999999974
No 50
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin.
Probab=23.50 E-value=7.9e+02 Score=24.95 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=26.2
Q ss_pred hHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCCCCChHHHHHHHHHH
Q 008834 141 RWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYT 190 (551)
Q Consensus 141 ~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~~~l~y~ 190 (551)
...+-..-||+.|.++++.|-=..+.. +-=+.+.++.++++.
T Consensus 60 ~~~~dI~~cq~~G~KVlLSIGG~~~~~--------~~~s~~~a~~Fa~~l 101 (280)
T cd02877 60 QLGADIKHCQSKGKKVLLSIGGAGGSY--------SLSSDADAKDFADYL 101 (280)
T ss_pred hHHHHHHHHHHCCCEEEEEccCCCCCc--------CCCCHHHHHHHHHHH
Confidence 446667789999999999873222110 011345677777775
No 51
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=22.74 E-value=2.8e+02 Score=25.82 Aligned_cols=65 Identities=8% Similarity=-0.101 Sum_probs=41.8
Q ss_pred ccchhhHHHHHHHHHhcCCEEEEEeecCCCCccccCCCCCC---CCC---hHHHHHHHHHHHHcCcccceeEee
Q 008834 136 CLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGG---AWD---SNNARDFLKYTISMGYQIDSWEYG 203 (551)
Q Consensus 136 ~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~---~W~---~~~A~~~l~y~~~~g~~i~~wElG 203 (551)
.+++++|++.++-.++.|.+-++-...++++... .+... .|. ..-...+++.|.+.|.+| ...|+
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~--yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv-~~Gl~ 86 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAF--YPSKLSPGGFYMPPVDLLEMILDAADKYGMKV-FVGLY 86 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCccc--CCccccCccccCCcccHHHHHHHHHHHcCCEE-EEeCC
Confidence 6899999999999999999887766666553110 00000 010 123445667778889888 66665
No 52
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=21.08 E-value=2.4e+02 Score=30.83 Aligned_cols=106 Identities=13% Similarity=0.104 Sum_probs=65.4
Q ss_pred HHHHHHHHHcCCceEecCCcccceeeEecCCCCCCCCCCccCCCCcccccccccchhhHHHHHHHHHhcCCEEEEEeecC
Q 008834 84 PLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNAL 163 (551)
Q Consensus 84 ~~L~~l~k~L~p~~LRiGG~~~D~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~ 163 (551)
+.=+.|++.+|--..|++=.++= +|-.+... +.+.- .-...+.+.+=|.+-|.+++++|+==
T Consensus 62 keDi~L~~emG~~~~R~SI~WsR--IfP~g~~~---------e~N~~-------gl~fY~~l~del~~~gIep~vTL~Hf 123 (460)
T COG2723 62 KEDIALAKEMGLNAFRTSIEWSR--IFPNGDGG---------EVNEK-------GLRFYDRLFDELKARGIEPFVTLYHF 123 (460)
T ss_pred HHHHHHHHHcCCCEEEeeeeEEE--eecCCCCC---------CcCHH-------HHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 33478999999988887543221 12111110 01111 11345888888999999999998621
Q ss_pred CCCccccCCCCCCCCChH-HHHHHHHHHH----HcCcccceeEeeccCCCC
Q 008834 164 HGRHNIRHNAWGGAWDSN-NARDFLKYTI----SMGYQIDSWEYGNELSGR 209 (551)
Q Consensus 164 ~~~~~~~~~~~~~~W~~~-~A~~~l~y~~----~~g~~i~~wElGNEp~~~ 209 (551)
..+....+ .-|.|... ....+++||+ +.+..|++|-.=|||+..
T Consensus 124 d~P~~L~~--~ygGW~nR~~i~~F~~ya~~vf~~f~dkVk~W~TFNE~n~~ 172 (460)
T COG2723 124 DLPLWLQK--PYGGWENRETVDAFARYAATVFERFGDKVKYWFTFNEPNVV 172 (460)
T ss_pred CCcHHHhh--ccCCccCHHHHHHHHHHHHHHHHHhcCcceEEEEecchhhh
Confidence 11111111 12578765 4566788874 578899999999999875
No 53
>COG4124 ManB Beta-mannanase [Carbohydrate transport and metabolism]
Probab=20.81 E-value=6.1e+02 Score=26.76 Aligned_cols=116 Identities=17% Similarity=0.119 Sum_probs=62.8
Q ss_pred ccceeEeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEE-ccCCCCCHHHHHHHHhhh--CCCCcCEE
Q 008834 196 QIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTIL-APGGFFDQEWYAKFLQVS--GSNVVNGV 272 (551)
Q Consensus 196 ~i~~wElGNEp~~~~~~g~~~ta~~Ya~d~~~~~~~~~~~~~~~~~~~~~v-gp~~~~~~~w~~~fl~~~--g~~~id~v 272 (551)
.| +|--==|++..+-....++++||.+-|+++.+.|++. +. .+..++. .|.+. .+++... |.+.+|.|
T Consensus 181 ti-y~r~~mE~n~~~FwWg~~d~~~yk~lw~~~~dy~~~~-r~-l~~lk~~yspn~~------~~~~~~yYPGd~YVDiV 251 (355)
T COG4124 181 TI-YWRPEMEMNSGWFWWGFWDPNQYKQLWIRLHDYLRKS-RG-LPWLKFMYSPNGG------FKGLEAYYPGDNYVDIV 251 (355)
T ss_pred EE-EechhhccCCCeeeeccCCHHHHHHHHHHHHHHHhhc-cC-CCeeEEEEcCCCC------cccchhcCCCCceeeee
Confidence 45 7877778777644445689999999999999999875 10 1122333 34432 1223222 44467887
Q ss_pred EEeEcCCCCCCCcchhhccCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEecccccc
Q 008834 273 THHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAY 329 (551)
Q Consensus 273 S~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~ 329 (551)
-+--|-..+. +. .+.....+|.+.+...+.. -.+-+||+|+.|.|...
T Consensus 252 GL~~ysd~~~-n~--~~~~~~~tyaelt~~gy~~------~~~~nKPf~faElGp~~ 299 (355)
T COG4124 252 GLDVYSDDPY-NQ--GDTGRDKTYAELTGPGYNR------VAGFNKPFGFAELGPEG 299 (355)
T ss_pred eeeccccCcc-cc--ccccccccHHHHhcCcchh------hhhcCCceeeecccccC
Confidence 7777754321 10 0111122222111111111 12346999999998644
Done!