BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008839
(551 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/461 (44%), Positives = 278/461 (60%), Gaps = 15/461 (3%)
Query: 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKL 130
+DFDLF IG+GSGGVRA+R A G VAI E +GGTCV+RGCVPKKL
Sbjct: 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAE----------EYRIGGTCVIRGCVPKKL 74
Query: 131 LVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIE 190
YAS+++ EF +S GFGWKY +P +W L+A KN E+ RL G+Y+ L N+ + + E
Sbjct: 75 YFYASQYAQEFSKSIGFGWKYA-DPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYE 133
Query: 191 GRGKIVDPHTVD--VDGKLYSARHILISVGGRPFIPD-IPGSEYAIDSDAALDLPSKPEK 247
R VD HT++ V G+ SA ILI+ G + I GS+ + S+ DL P+
Sbjct: 134 SRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNEIFDLEKLPKS 193
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEE 307
I IVGGGYI +EFA IF GL + + R +LR FD D+R + + M +GI E
Sbjct: 194 IVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEA 253
Query: 308 SPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDE 367
+ + +ST+ +V G VM ATGR PNT LGLE+ GVK+ + GA+ VDE
Sbjct: 254 TVSQV-QSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDE 312
Query: 368 YSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIG 427
T V IWAVGDVT I LTPVA+ + K F+ T PDY + +AVFSQP IG
Sbjct: 313 KMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIG 372
Query: 428 QVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDA 487
VGLSEE A+ Y ++++ FRP++ LSG P+++FMKLV+ ++ V+G H+ GE+A
Sbjct: 373 TVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENA 432
Query: 488 PEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPT 528
EI Q +++K LTK FD T+ VHPT +EE VT+ P+
Sbjct: 433 GEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTMYKPS 473
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/467 (45%), Positives = 288/467 (61%), Gaps = 14/467 (2%)
Query: 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPK 128
S +D+DLF IG GSGGVR+ R AA G VAI E F GGTCV+RGCVPK
Sbjct: 2 SAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAE-EFR---------YGGTCVIRGCVPK 51
Query: 129 KLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITL 188
KL VYAS+F+ F+++ GFGW G E + DW+ L+A K E+ RL G+Y+ L NAG +
Sbjct: 52 KLYVYASQFAEHFEDAAGFGWTVG-ESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEI 110
Query: 189 IEGRGKIVDPHTVDV--DGKLYSARHILISVGGRPFIPD-IPGSEYAIDSDAALDLPSKP 245
++ R ++ P+TV + GK +A I+I+VGG P D +PG E I S+ A DLP+ P
Sbjct: 111 LDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNEAFDLPALP 170
Query: 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHT 305
E I I GGGYIA+EFA IF GL + + R K++L FD+D R + +GI
Sbjct: 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDXRRGLHAAXEEKGIRILC 230
Query: 306 EESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEV 365
E+ Q++ DG T K V A GR PNT LGLE GV+ + GAI V
Sbjct: 231 EDIIQSVSADADGRRVATTXKHGEIVADQVXLALGRXPNTNGLGLEAAGVRTNELGAIIV 290
Query: 366 DEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPP 425
D +S T+ P I+A+GDVTDR+ LTPVA+ E +T ++ PT PD+ + +AVFSQP
Sbjct: 291 DAFSRTSTPGIYALGDVTDRVQLTPVAIHEAXCFIETEYKNNPTSPDHDLIATAVFSQPE 350
Query: 426 IGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGE 485
IG VG++EE+A +++ +I+V+ A FRP KATLSG ++ KLV+ A KV+G H+ G
Sbjct: 351 IGTVGITEEEAARKFQEIEVYRAEFRPXKATLSGRKEKTIXKLVVNAADRKVVGAHILGH 410
Query: 486 DAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTRKIR 532
DA E Q ++++AG TK DFD T VHPTAAEE VT P+ ++R
Sbjct: 411 DAGEXAQLLGISLRAGCTKDDFDRTXAVHPTAAEELVTXYQPSYRVR 457
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/460 (40%), Positives = 276/460 (60%), Gaps = 13/460 (2%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
FDL IG GSGG+ + AA FG VA+ E + +GGTCV GCVPKK++
Sbjct: 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIE----------SKALGGTCVNVGCVPKKVMW 54
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
YAS + ++ GFG + + DW L+A ++ + + + + GIT ++G
Sbjct: 55 YASHLAEAVRDAPGFGVQ-ASGGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGH 113
Query: 193 GKIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYAIDSDAALDLPSKPEKIAIVG 252
+ VD HT++V+G+ SA HI+I+ GGRP +P +PG+E I SD L +P+++AI+G
Sbjct: 114 ARFVDAHTIEVEGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFFALQQQPKRVAIIG 173
Query: 253 GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAI 312
GYI +E AG+ SEV V + ++L FD + +AE M +GIE H E + A+
Sbjct: 174 AGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAAL 233
Query: 313 LKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTA 372
+ G+ V + ++GF V++A GR PNT++LGLE G+++ NG + D Y T
Sbjct: 234 ERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTN 293
Query: 373 VPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPT-KPDYSAVPSAVFSQPPIGQVGL 431
VP ++A+GD+T R LTPVA+ G LA+ LF + K DY +P+ VF+ PP+ +VGL
Sbjct: 294 VPGVYALGDITGRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGL 353
Query: 432 SEEQAIQEYGDI-DVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEI 490
SE +A + GD+ V+ +F P++ L+ + MKLV +V+G+H+ G+ A E+
Sbjct: 354 SEPEARERLGDVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEM 413
Query: 491 VQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTRK 530
+QGFAVAVK G TKADFD TV +HP +AEE VTL+ P R+
Sbjct: 414 LQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLKEPVRR 453
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 347 bits (891), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 180/416 (43%), Positives = 264/416 (63%), Gaps = 9/416 (2%)
Query: 116 VGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYG---TEPQHDWSTLIANKNAELQR 172
+GGTCV GCVPKK++ +A++ + +G YG T + +W TLIA++ A + R
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAI---HMYGPDYGFDTTINKFNWETLIASRTAYIDR 94
Query: 173 LTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYA 232
+ Y+N+L + +I+G + VD T++V+G+ +A HILI+ GGRP PDIPG EY
Sbjct: 95 IHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYG 154
Query: 233 IDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFV 292
IDSD LP+ PE++A+VG GYIA+E AG+ +GL ++ H+F+R+ LR FD I + +
Sbjct: 155 IDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETL 214
Query: 293 AEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEK 352
E M+ G + HT P+A++K+TDGSL+++ G + +++A GR P N+ LE
Sbjct: 215 VEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEA 274
Query: 353 VGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKP- 411
GVK + G I VD+Y T + I+AVGD T + LTPVA+ G L++ LF +P +
Sbjct: 275 AGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHL 334
Query: 412 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLPDRIFMKLV 469
DYS +P+ VFS PPIG VGL+E QA ++YGD + V+ ++F + ++ MKLV
Sbjct: 335 DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLV 394
Query: 470 LCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
K++G+H G E++QGFAVA+K G TK DFD TV +HPTAAEEFVT+R
Sbjct: 395 CVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR 450
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 340 bits (873), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 190/471 (40%), Positives = 278/471 (59%), Gaps = 17/471 (3%)
Query: 73 FDLFTIGAGSGGVRASRFAA-NFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
+DL +GAGSGG+ A AA VA+ ++ +T +GGTCV GCVPKKL+
Sbjct: 25 YDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQ-ATHGPPLFAALGGTCVNVGCVPKKLM 83
Query: 132 VYASKFSHEFDESNGFGWKYGTEPQH-DWSTLIANKNAELQRLTGIYKNILINA-GITLI 189
V +++ ES GFGW+ E +W TLIA KN + + YK++ + G++
Sbjct: 84 VTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFH 143
Query: 190 EGRGKIVDPHTVDVDG---------KLYSARHILISVGGRPFIPDIPGSEYAIDSDAALD 240
G G + D HTV V + +ILI+ G P +PG E+ I S+ A
Sbjct: 144 MGFGALQDAHTVVVRKSEDPHSDVLETLDTEYILIATGSWPTRLGVPGDEFCITSNEAFY 203
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
L P+++ VGGGYIA+EFAGIF+G V + R +LRGFD ++R + +Q+
Sbjct: 204 LEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLG 263
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GI T +P I K+ DGS V N GT + + VM A GR P ++ L L+K GV+
Sbjct: 264 ANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRT 323
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVP 417
KNGA++VD YS T+V +I+A+GDVT+R+ LTPVA+ EG A +T+F +P D++ V
Sbjct: 324 GKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEGAAFVETVFGGKPRATDHTKVA 383
Query: 418 SAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTN-K 476
AVFS PPIG G++EE+A + Y + V+ ++F PL +SG + FM ++ ++N +
Sbjct: 384 CAVFSIPPIGTCGMTEEEAAKNYETVAVYASSFTPLMHNISGSKHKEFMIRIITNESNGE 443
Query: 477 VLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTP 527
VLG+HM G+ APEI+Q + +K G +DF +T+GVHPT+AEE ++RTP
Sbjct: 444 VLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSMRTP 494
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 340 bits (873), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 190/471 (40%), Positives = 278/471 (59%), Gaps = 17/471 (3%)
Query: 73 FDLFTIGAGSGGVRASRFAA-NFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
+DL +GAGSGG+ A AA VA+ ++ +T +GGTCV GCVPKKL+
Sbjct: 25 YDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQ-ATHGPPLFAALGGTCVNVGCVPKKLM 83
Query: 132 VYASKFSHEFDESNGFGWKYGTEPQH-DWSTLIANKNAELQRLTGIYKNILINA-GITLI 189
V +++ ES GFGW+ E +W TLIA KN + + YK++ + G++
Sbjct: 84 VTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFH 143
Query: 190 EGRGKIVDPHTVDVDG---------KLYSARHILISVGGRPFIPDIPGSEYAIDSDAALD 240
G G + D HTV V + +ILI+ G P +PG E+ I S+ A
Sbjct: 144 MGFGALQDAHTVVVRKSEDPHSDVLETLDTEYILIATGSWPTRLGVPGDEFCITSNEAFY 203
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
L P+++ VGGGYIA+EFAGIF+G V + R +LRGFD ++R + +Q+
Sbjct: 204 LEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLG 263
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GI T +P I K+ DGS V N GT + + VM A GR P ++ L L+K GV+
Sbjct: 264 ANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRT 323
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVP 417
KNGA++VD YS T+V +I+A+GDVT+R+ LTPVA+ EG A +T+F +P D++ V
Sbjct: 324 GKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEGAAFVETVFGGKPRATDHTKVA 383
Query: 418 SAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTN-K 476
AVFS PPIG G++EE+A + Y + V+ ++F PL +SG + FM ++ ++N +
Sbjct: 384 CAVFSIPPIGTCGMTEEEAAKNYETVAVYASSFTPLMHNISGSKHKEFMIRIITNESNGE 443
Query: 477 VLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTP 527
VLG+HM G+ APEI+Q + +K G +DF +T+GVHPT+AEE ++RTP
Sbjct: 444 VLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSMRTP 494
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 281/487 (57%), Gaps = 23/487 (4%)
Query: 73 FDLFTIGAGSGGVRASRFAAN-FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
FDL IGAGSGG+ A AA +G VA+ ++ S +GGTCV GCVPKKL+
Sbjct: 5 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSH-GPPFYAALGGTCVNVGCVPKKLM 63
Query: 132 VYASKFSHEFDESNGFGWKY-GTEPQHDWSTLIANKNAELQRLTGIYKNILINA------ 184
V +++ ES GFGW++ G+ + +W LIA KN + + Y+ + +
Sbjct: 64 VTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFF 123
Query: 185 -GITLIEGRGKIVDPHTVDVDGKL---YSARHILISVGGRPFIPDIPGSEYAIDSDAALD 240
G +E + +V T D + A HIL++ G P +P IPG E+ I S+ A
Sbjct: 124 LGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFY 183
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
LP P ++ VGGG+I++EFAGIF+ +V + R +LRGFDE IR+ V +Q++
Sbjct: 184 LPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLT 243
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GIE T E+P + +TDGS V G VM A GR P T +L L VGVK+
Sbjct: 244 ANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKL 303
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVP 417
T G ++VDE+S T VP+I+A+GD+TDR+ LTPVA+ EG AL T+F +P K D++ V
Sbjct: 304 TPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVA 363
Query: 418 SAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVLCAKTNK 476
SAVFS PPIG GL EE A +E+ + V+ ++F PL +SG + F+ K+V
Sbjct: 364 SAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGT 423
Query: 477 VLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPT------RK 530
VLG+H+ G+ APEI+Q V ++ +DF T+GVHPT+AEE ++RTP+ K
Sbjct: 424 VLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEK 483
Query: 531 IRKSPPS 537
+ K P S
Sbjct: 484 MEKLPDS 490
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 281/487 (57%), Gaps = 23/487 (4%)
Query: 73 FDLFTIGAGSGGVRASRFAAN-FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
FDL IGAGSGG+ A AA +G VA+ ++ S +GGTCV GCVPKKL+
Sbjct: 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSH-GPPFYAALGGTCVNVGCVPKKLM 66
Query: 132 VYASKFSHEFDESNGFGWKY-GTEPQHDWSTLIANKNAELQRLTGIYKNILINA------ 184
V +++ ES GFGW++ G+ + +W LIA KN + + Y+ + +
Sbjct: 67 VTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFF 126
Query: 185 -GITLIEGRGKIVDPHTVDVDGKL---YSARHILISVGGRPFIPDIPGSEYAIDSDAALD 240
G +E + +V T D + A HIL++ G P +P IPG E+ I S+ A
Sbjct: 127 LGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFY 186
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
LP P ++ VGGG+I++EFAGIF+ +V + R +LRGFDE IR+ V +Q++
Sbjct: 187 LPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLT 246
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GIE T E+P + +TDGS V G VM A GR P T +L L VGVK+
Sbjct: 247 ANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKL 306
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVP 417
T G ++VDE+S T VP+I+A+GD+TDR+ LTPVA+ EG AL T+F +P K D++ V
Sbjct: 307 TPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVA 366
Query: 418 SAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVLCAKTNK 476
SAVFS PPIG GL EE A +E+ + V+ ++F PL +SG + F+ K+V
Sbjct: 367 SAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGT 426
Query: 477 VLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPT------RK 530
VLG+H+ G+ APEI+Q V ++ +DF T+GVHPT+AEE ++RTP+ K
Sbjct: 427 VLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEK 486
Query: 531 IRKSPPS 537
+ K P S
Sbjct: 487 MEKLPDS 493
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 333 bits (853), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/416 (42%), Positives = 258/416 (62%), Gaps = 9/416 (2%)
Query: 116 VGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYG---TEPQHDWSTLIANKNAELQR 172
+GGTCV GCVPKK++ +A++ + +G YG T + +W TLIA++ A + R
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAI---HMYGPDYGFDTTINKFNWETLIASRTAYIDR 94
Query: 173 LTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYA 232
+ Y+N+L + +I+G + VD T++V+G+ +A HILI+ GGRP PDIPG EY
Sbjct: 95 IHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYG 154
Query: 233 IDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFV 292
IDSD LP+ PE++A+VG GYI +E G+ +GL ++ H+F L FD I + +
Sbjct: 155 IDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETL 214
Query: 293 AEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEK 352
E M+ G + HT P+A++K+TDGSL+++ G + +++A GR P N+ LE
Sbjct: 215 VEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEA 274
Query: 353 VGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKP- 411
GVK + G I VD+Y T + I+AVGD T + LTPVA+ G L++ LF +P +
Sbjct: 275 AGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHL 334
Query: 412 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLPDRIFMKLV 469
DYS +P+ VFS PPIG VGL+E QA ++YGD + V+ ++F + ++ MKLV
Sbjct: 335 DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLV 394
Query: 470 LCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
K++G+H G E++QGFAVA+K G TK DFD TV +HPTAAEEFVT+R
Sbjct: 395 CVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR 450
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 331 bits (848), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 278/478 (58%), Gaps = 30/478 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAAN-FGASVAICEL------PFSTISSETTGGVGGTCVLRGC 125
FDL IGAGSGG+ A+ AA + VA+ ++ PF + +GGTCV GC
Sbjct: 6 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFS-------ALGGTCVNVGC 58
Query: 126 VPKKLLVYASKFSHEFDESNGFGWKYG-TEPQHDWSTLIANKNAELQRLTGIYKNILINA 184
VPKKL+V +++ ES GFGW++ T + +W LIA K+ + + Y + +
Sbjct: 59 VPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDT 118
Query: 185 -GITLIEGRGKIVDPHTVDVD---------GKLYSARHILISVGGRPFIPDIPGSEYAID 234
G+ G G + + V+V + HIL++ G P +P+IPG E+ I
Sbjct: 119 EGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIEHCIS 178
Query: 235 SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVLRGFDEDIRDF 291
S+ A LP P ++ VGGG+I++EFAGIF+ +V + R + +LRGFD +R+
Sbjct: 179 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 238
Query: 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLE 351
+ +Q++ GI+ T+E+P + + DGS SV G F VM A GR P TK+L L+
Sbjct: 239 LTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 298
Query: 352 KVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKP 411
GV M KNG ++VDEYS T V +I+A+GDVT+R+ LTPVA+ E AL T+F P K
Sbjct: 299 NAGV-MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTTPRKT 357
Query: 412 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVL 470
D++ V SAVFS PPIG GL EE A + Y + V+ ++F PL +SG + F+ K++
Sbjct: 358 DHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSFTPLMHKVSGSKYKTFVAKIIT 417
Query: 471 CAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPT 528
VLG+H+ G++APEI+QG + +K +DF T+GVHPT+AEE ++RTP+
Sbjct: 418 NHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEELCSMRTPS 475
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 331 bits (848), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 278/478 (58%), Gaps = 30/478 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAAN-FGASVAICEL------PFSTISSETTGGVGGTCVLRGC 125
FDL IGAGSGG+ A+ AA + VA+ ++ PF + +GGTCV GC
Sbjct: 5 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFS-------ALGGTCVNVGC 57
Query: 126 VPKKLLVYASKFSHEFDESNGFGWKYG-TEPQHDWSTLIANKNAELQRLTGIYKNILINA 184
VPKKL+V +++ ES GFGW++ T + +W LIA K+ + + Y + +
Sbjct: 58 VPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDT 117
Query: 185 -GITLIEGRGKIVDPHTVDVD---------GKLYSARHILISVGGRPFIPDIPGSEYAID 234
G+ G G + + V+V + HIL++ G P +P+IPG E+ I
Sbjct: 118 EGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIEHCIS 177
Query: 235 SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVLRGFDEDIRDF 291
S+ A LP P ++ VGGG+I++EFAGIF+ +V + R + +LRGFD +R+
Sbjct: 178 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 237
Query: 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLE 351
+ +Q++ GI+ T+E+P + + DGS SV G F VM A GR P TK+L L+
Sbjct: 238 LTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 297
Query: 352 KVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKP 411
GV M KNG ++VDEYS T V +I+A+GDVT+R+ LTPVA+ E AL T+F P K
Sbjct: 298 NAGV-MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTTPRKT 356
Query: 412 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVL 470
D++ V SAVFS PPIG GL EE A + Y + V+ ++F PL +SG + F+ K++
Sbjct: 357 DHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSFTPLMHKVSGSKYKTFVAKIIT 416
Query: 471 CAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPT 528
VLG+H+ G++APEI+QG + +K +DF T+GVHPT+AEE ++RTP+
Sbjct: 417 NHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEELCSMRTPS 474
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 330 bits (846), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 278/478 (58%), Gaps = 30/478 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAAN-FGASVAICEL------PFSTISSETTGGVGGTCVLRGC 125
FDL IGAGSGG+ A+ AA + VA+ ++ PF + +GGTCV GC
Sbjct: 4 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFS-------ALGGTCVNVGC 56
Query: 126 VPKKLLVYASKFSHEFDESNGFGWKYG-TEPQHDWSTLIANKNAELQRLTGIYKNILINA 184
VPKKL+V +++ ES GFGW++ T + +W LIA K+ + + Y + +
Sbjct: 57 VPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDT 116
Query: 185 -GITLIEGRGKIVDPHTVDVD---------GKLYSARHILISVGGRPFIPDIPGSEYAID 234
G+ G G + + V+V + HIL++ G P +P+IPG E+ I
Sbjct: 117 EGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIEHCIS 176
Query: 235 SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVLRGFDEDIRDF 291
S+ A LP P ++ VGGG+I++EFAGIF+ +V + R + +LRGFD +R+
Sbjct: 177 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 236
Query: 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLE 351
+ +Q++ GI+ T+E+P + + DGS SV G F VM A GR P TK+L L+
Sbjct: 237 LTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 296
Query: 352 KVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKP 411
GV M KNG ++VDEYS T V +I+A+GDVT+R+ LTPVA+ E AL T+F P K
Sbjct: 297 NAGV-MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTTPRKT 355
Query: 412 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVL 470
D++ V SAVFS PPIG GL EE A + Y + V+ ++F PL +SG + F+ K++
Sbjct: 356 DHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSFTPLMHKVSGSKYKTFVAKIIT 415
Query: 471 CAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPT 528
VLG+H+ G++APEI+QG + +K +DF T+GVHPT+AEE ++RTP+
Sbjct: 416 NHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEELCSMRTPS 473
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/478 (39%), Positives = 279/478 (58%), Gaps = 30/478 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAAN-FGASVAICEL------PFSTISSETTGGVGGTCVLRGC 125
FDL IGAGSGG+ A+ AA + VA+ ++ PF + +GGTCV GC
Sbjct: 5 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFS-------ALGGTCVNVGC 57
Query: 126 VPKKLLVYASKFSHEFDESNGFGWKYG-TEPQHDWSTLIANKNAELQRLTGIYKNILINA 184
VPKKL+V +++ ES GFGW++ T + +W LIA K+ + + Y+ + +
Sbjct: 58 VPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDT 117
Query: 185 -GITLIEGRGKIVDPHTVDVD---------GKLYSARHILISVGGRPFIPDIPGSEYAID 234
G+ G G + + V+V + +IL++ G P +P+IPG E+ I
Sbjct: 118 EGLEFFLGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPHMPNIPGIEHCIS 177
Query: 235 SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVLRGFDEDIRDF 291
S+ A LP P ++ VGGG+I++EFAGIF+ +V + R + +LRGFD +R+
Sbjct: 178 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 237
Query: 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLE 351
+ +Q++ GI+ T+E+P + + DGS SV G F VM A GR P TK+L L+
Sbjct: 238 LTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 297
Query: 352 KVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKP 411
GV M KNG ++VDEYS T V +I+A+GDVT+R+ LTPVA+ E AL T+F P K
Sbjct: 298 NAGV-MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTNPRKT 356
Query: 412 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVL 470
D++ V SAVFS PPIG GL EE A + Y + V+ ++F PL +SG + F+ K++
Sbjct: 357 DHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSFTPLMHNISGSKYKTFVAKIIT 416
Query: 471 CAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPT 528
VLG+H+ G++APEI+QG + +K +DF T+GVHPT+AEE ++RTP+
Sbjct: 417 NHSDGTVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPTSAEELCSMRTPS 474
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/471 (39%), Positives = 267/471 (56%), Gaps = 17/471 (3%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGAS-VAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
+DL IGAGSGG+ A AA+ VA+ +L +GGTCV GCVPKKL+
Sbjct: 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQ-KHHGPPHYAALGGTCVNVGCVPKKLM 62
Query: 132 VYASKFSHEFDESNGFGWKYGTEP-QHDWSTLIANKNAELQRLTGIYKNILINA-GITLI 189
V + + ES GFGW+ E + +W LIA KN + + Y+ + + G+T
Sbjct: 63 VTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFH 122
Query: 190 EGRGKIVDPHTVDVDG---------KLYSARHILISVGGRPFIPDIPGSEYAIDSDAALD 240
+G G + D HTV V + +IL++ G P I G + I S+ A
Sbjct: 123 QGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIEGDDLCITSNEAFY 182
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLTS---EVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
L P++ VGGGYI++EFAGIF+ + +V + R +LRGFD ++R + EQ+
Sbjct: 183 LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLR 242
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GI T E+P + K+ DG+ V G + VM A GR P ++ L LEK GV++
Sbjct: 243 ANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEV 302
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVP 417
KNGAI+VD YS T V +I+A+GDVTDR+ LTPVA+ EG A T+F +P D++ V
Sbjct: 303 AKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVA 362
Query: 418 SAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVLCAKTNK 476
AVFS PP+G G EE A ++Y + V+ ++F PL +SG + FM ++V +
Sbjct: 363 CAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGE 422
Query: 477 VLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTP 527
VLG+HM G+ +PEI+Q A+ +K G +DF T+GVHPT+AEE ++RTP
Sbjct: 423 VLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRTP 473
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 322 bits (825), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 187/482 (38%), Positives = 270/482 (56%), Gaps = 17/482 (3%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGAS-VAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
+DL IGAGSGG+ A AA+ VA+ +L +GGTCV GCVPKKL+
Sbjct: 5 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQ-KHHGPPHYAALGGTCVNVGCVPKKLM 63
Query: 132 VYASKFSHEFDESNGFGWKYGTEP-QHDWSTLIANKNAELQRLTGIYKNILINA-GITLI 189
V + + ES GFGW+ E + +W LIA KN + + Y+ + + G+T
Sbjct: 64 VTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFH 123
Query: 190 EGRGKIVDPHTVDVDG---------KLYSARHILISVGGRPFIPDIPGSEYAIDSDAALD 240
+G G + D HTV V + +IL++ G P I G + I S+ A
Sbjct: 124 QGWGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIEGDDLCITSNEAFY 183
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLTS---EVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
L P++ VGGGYI++EFAGIF+ + +V + R +LRGFD ++R + EQ+
Sbjct: 184 LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLR 243
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GI T E+P + K+ DG+ V G + VM A GR P ++ L L+K GV++
Sbjct: 244 ANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLDKAGVEV 303
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVP 417
KNGAI+VD YS T V +I+A+GDVTDR+ LTPVA+ EG A T+F +P D++ V
Sbjct: 304 AKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVA 363
Query: 418 SAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVLCAKTNK 476
AVFS PP+G G EE A ++Y + V+ ++F PL +SG + FM ++V +
Sbjct: 364 CAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGE 423
Query: 477 VLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTRKIRKSPP 536
VLG+HM G+ +PEI+Q A+ +K G +DF T+GVHPT+AEE ++RTP +K
Sbjct: 424 VLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRTPAYFYQKGKR 483
Query: 537 SE 538
E
Sbjct: 484 VE 485
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 322 bits (824), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 187/482 (38%), Positives = 270/482 (56%), Gaps = 17/482 (3%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGAS-VAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
+DL IGAGSGG+ A AA+ VA+ +L +GGTCV GCVPKKL+
Sbjct: 5 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQ-KHHGPPHYAALGGTCVNVGCVPKKLM 63
Query: 132 VYASKFSHEFDESNGFGWKYGTEP-QHDWSTLIANKNAELQRLTGIYKNILINA-GITLI 189
V + + ES GFGW+ E + +W LIA KN + + Y+ + + G+T
Sbjct: 64 VTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFH 123
Query: 190 EGRGKIVDPHTVDVDG---------KLYSARHILISVGGRPFIPDIPGSEYAIDSDAALD 240
+G G + D HTV V + +IL++ G P I G + I S+ A
Sbjct: 124 QGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIEGDDLCITSNEAFY 183
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLTS---EVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
L P++ VGGGYI++EFAGIF+ + +V + R +LRGFD ++R + EQ+
Sbjct: 184 LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLR 243
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GI T E+P + K+ DG+ V G + VM A GR P ++ L L+K GV++
Sbjct: 244 ANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLDKAGVEV 303
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVP 417
KNGAI+VD YS T V +I+A+GDVTDR+ LTPVA+ EG A T+F +P D++ V
Sbjct: 304 AKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVA 363
Query: 418 SAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVLCAKTNK 476
AVFS PP+G G EE A ++Y + V+ ++F PL +SG + FM ++V +
Sbjct: 364 CAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGE 423
Query: 477 VLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTRKIRKSPP 536
VLG+HM G+ +PEI+Q A+ +K G +DF T+GVHPT+AEE ++RTP +K
Sbjct: 424 VLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRTPAYFYQKGKR 483
Query: 537 SE 538
E
Sbjct: 484 VE 485
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/471 (39%), Positives = 266/471 (56%), Gaps = 17/471 (3%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGAS-VAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
+DL IGAGSGG+ A AA+ VA+ +L +GGTCV GCVPKKL+
Sbjct: 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQ-KHHGPPHYAALGGTCVNVGCVPKKLM 62
Query: 132 VYASKFSHEFDESNGFGWKYGTEP-QHDWSTLIANKNAELQRLTGIYKNILINA-GITLI 189
V + + ES GFGW+ E + +W LIA KN + + Y+ + + G+T
Sbjct: 63 VTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFH 122
Query: 190 EGRGKIVDPHTVDVDG---------KLYSARHILISVGGRPFIPDIPGSEYAIDSDAALD 240
+G G + D HTV V + +IL++ G P I G + I S+ A
Sbjct: 123 QGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIEGDDLCITSNEAFY 182
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLTS---EVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
L P++ VGGGYI++EFAGIF+ + +V + R +LRGFD ++R + EQ+
Sbjct: 183 LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLR 242
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GI T E+P + K+ DG+ V G + VM A GR P ++ L LEK GV++
Sbjct: 243 ANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEV 302
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVP 417
KNGAI+VD YS T V +I+A+GDVTDR+ LTPVA+ EG A T+F +P D++ V
Sbjct: 303 AKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVA 362
Query: 418 SAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVLCAKTNK 476
AVFS PP+G G EE A ++Y + V+ ++F PL +SG + FM ++V +
Sbjct: 363 CAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGE 422
Query: 477 VLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTP 527
VLG+HM G+ +PEI+Q A+ +K G +D T+GVHPT+AEE ++RTP
Sbjct: 423 VLGVHMLGDSSPEIIQSVAICLKMGAKISDVYNTIGVHPTSAEELCSMRTP 473
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 314 bits (805), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 188/472 (39%), Positives = 264/472 (55%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++ AA GA A+ E + +GGTCV GCVPKK++
Sbjct: 4 YDYLVIGGGSGGLESAWRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMW 53
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 54 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 112
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 113 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 172
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 173 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFS 232
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 233 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLGIQ 289
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 290 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 349
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 350 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANK 409
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 410 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 461
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 314 bits (804), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 188/472 (39%), Positives = 264/472 (55%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++ AA GA A+ E + +GGTCV GCVPKK++
Sbjct: 21 YDYLVIGGGSGGLESAWRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMW 70
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 71 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 130 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 189
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 190 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFS 249
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLGIQ 306
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 307 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 366
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 367 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANK 426
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 427 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 189/472 (40%), Positives = 265/472 (56%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++R AA GA A+ E + +GGTCV GCVPKK++
Sbjct: 4 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMW 53
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 54 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 112
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 113 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 172
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 173 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFS 232
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 233 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLGIQ 289
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 290 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 349
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 350 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANK 409
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 410 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 461
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 189/472 (40%), Positives = 265/472 (56%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++R AA GA A+ E + +GGTCV GCVPKK++
Sbjct: 20 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMW 69
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 70 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 128
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 129 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 188
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 189 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFS 248
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 249 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLGIQ 305
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 306 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 365
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 366 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANK 425
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 426 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 477
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 189/472 (40%), Positives = 265/472 (56%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++R AA GA A+ E + +GGTCV GCVPKK++
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMW 70
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 71 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 130 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 189
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 190 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFS 249
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLGIQ 306
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 307 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 366
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 367 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANK 426
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 427 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 189/472 (40%), Positives = 265/472 (56%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++R AA GA A+ E + +GGTCV GCVPKK++
Sbjct: 22 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMW 71
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 72 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 130
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 131 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 190
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 191 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFS 250
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 251 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLGIQ 307
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 308 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 367
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 368 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANK 427
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 428 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 479
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 304 bits (778), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 197/499 (39%), Positives = 282/499 (56%), Gaps = 29/499 (5%)
Query: 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPK 128
S YD+DL IG GSGG+ A + AA +GA A+ + T TT G+GGTCV GC+PK
Sbjct: 104 SKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIG-TTWGLGGTCVNVGCIPK 162
Query: 129 KLLVYASKFSHEFDESNGFGWKYG-TEPQHDWSTLIANKNAELQRLTGIYKNILINAGIT 187
KL+ A SH +++ FGW ++ H+WST++ + + L YK L + +T
Sbjct: 163 KLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT 222
Query: 188 LIEGRGKIVDPHTVDVDGK-----LYSARHILISVGGRPFIPDIPGS-EYAIDSDAALDL 241
+ +G+++ PH V + K + I+++ G RP P+IPG+ EY I SD L
Sbjct: 223 YLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSL 282
Query: 242 PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGI 301
P P K ++G Y+ALE AG + L +V V +R +LRGFD+ + + V + M G+
Sbjct: 283 PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LLRGFDQQMAEKVGDYMENHGV 341
Query: 302 EFHTEESPQAI--LKSTD------GSLSVKTN----KGTVDGFSHVMFATGRRPNTKNLG 349
+F P I LK D G L VK + K + F V+FA GR P +
Sbjct: 342 KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVL 401
Query: 350 LEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT-DRINLTPVALMEGGALAKTLFQAEP 408
E VGVK+ KNG + + T V +++A+GD+ + LTPVA+ G LA+ LF
Sbjct: 402 CETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGAT 461
Query: 409 TKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLPDRI-F 465
DYS V + VF+ G GLSEE AI++YGD I+V+ +NF+PL+ T++ D + +
Sbjct: 462 ELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCY 521
Query: 466 MKLVLCAKTN--KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVT 523
MKLV C K++ +VLGLH+ G +A EI QG+AVA+K G TKADFD T+G+HPT +E F T
Sbjct: 522 MKLV-CRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTT 580
Query: 524 LRTPTRKIRKSPPSEGMTG 542
L T+K SP G G
Sbjct: 581 LHV-TKKSGVSPIVSGCCG 598
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/499 (39%), Positives = 282/499 (56%), Gaps = 29/499 (5%)
Query: 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPK 128
S YD+DL IG GSGG+ A + AA +GA A+ + T TT G+GGTCV GC+PK
Sbjct: 104 SKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIG-TTWGLGGTCVNVGCIPK 162
Query: 129 KLLVYASKFSHEFDESNGFGWKYG-TEPQHDWSTLIANKNAELQRLTGIYKNILINAGIT 187
KL+ A SH +++ FGW ++ H+WST++ + + L YK L + +T
Sbjct: 163 KLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT 222
Query: 188 LIEGRGKIVDPHTVDVDGK-----LYSARHILISVGGRPFIPDIPGS-EYAIDSDAALDL 241
+ +G+++ PH V + K + I+++ G RP P+IPG+ EY I SD L
Sbjct: 223 YLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSL 282
Query: 242 PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGI 301
P P K ++G Y+ALE AG + L +V V +R +LRGFD+ + + V + M G+
Sbjct: 283 PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LLRGFDQQMAEKVGDYMENHGV 341
Query: 302 EFHTEESPQAI--LKSTD------GSLSVKTN----KGTVDGFSHVMFATGRRPNTKNLG 349
+F P I LK D G L VK + K + F V+FA GR P +
Sbjct: 342 KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVL 401
Query: 350 LEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT-DRINLTPVALMEGGALAKTLFQAEP 408
E VGVK+ KNG + + T V +++A+GD+ + LTPVA+ G LA+ LF
Sbjct: 402 CETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGAT 461
Query: 409 TKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLPDRI-F 465
DYS V + VF+ G GLSEE AI++YGD I+V+ +NF+PL+ T++ D + +
Sbjct: 462 ELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCY 521
Query: 466 MKLVLCAKTN--KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVT 523
MKLV C K++ +VLGLH+ G +A EI QG+AVA+K G TKADFD T+G+HPT +E F T
Sbjct: 522 MKLV-CRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTT 580
Query: 524 LRTPTRKIRKSPPSEGMTG 542
L T+K SP G G
Sbjct: 581 LHV-TKKSGVSPIVSGCXG 598
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/496 (39%), Positives = 281/496 (56%), Gaps = 29/496 (5%)
Query: 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPK 128
S YD+DL IG GSGG+ A + AA +GA A+ + T TT G+GGTCV GC+PK
Sbjct: 104 SKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIG-TTWGLGGTCVNVGCIPK 162
Query: 129 KLLVYASKFSHEFDESNGFGWKYG-TEPQHDWSTLIANKNAELQRLTGIYKNILINAGIT 187
KL+ A SH +++ FGW ++ H+WST++ + + L YK L + +T
Sbjct: 163 KLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT 222
Query: 188 LIEGRGKIVDPHTVDVDGK-----LYSARHILISVGGRPFIPDIPGS-EYAIDSDAALDL 241
+ +G+++ PH V + K + I+++ G RP P+IPG+ EY I SD L
Sbjct: 223 YLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSL 282
Query: 242 PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGI 301
P P K ++G Y+ALE AG + L +V V +R +LRGFD+ + + V + M G+
Sbjct: 283 PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LLRGFDQQMAEKVGDYMENHGV 341
Query: 302 EFHTEESPQAI--LKSTD------GSLSVKTN----KGTVDGFSHVMFATGRRPNTKNLG 349
+F P I LK D G L VK + K + F V+FA GR P +
Sbjct: 342 KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVL 401
Query: 350 LEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT-DRINLTPVALMEGGALAKTLFQAEP 408
E VGVK+ KNG + + T V +++A+GD+ + LTPVA+ G LA+ LF
Sbjct: 402 CETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGAT 461
Query: 409 TKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLPDRI-F 465
DYS V + VF+ G GLSEE AI++YGD I+V+ +NF+PL+ T++ D + +
Sbjct: 462 ELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCY 521
Query: 466 MKLVLCAKTN--KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVT 523
MKLV C K++ +VLGLH+ G +A EI QG+AVA+K G TKADFD T+G+HPT +E F T
Sbjct: 522 MKLV-CRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTT 580
Query: 524 LRTPTRKIRKSPPSEG 539
L T+K SP G
Sbjct: 581 LHV-TKKSGVSPIVSG 595
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/472 (39%), Positives = 264/472 (55%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++R AA GA A+ E + +GGT V GCVPKK++
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTXVNVGCVPKKVMW 70
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 71 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 130 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 189
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 190 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFS 249
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLGIQ 306
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 307 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 366
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 367 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANK 426
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 427 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/472 (39%), Positives = 264/472 (55%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++R AA GA A+ E + +GGTCV G VPKK++
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGXVPKKVMW 70
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 71 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 130 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 189
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 190 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFS 249
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLGIQ 306
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 307 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 366
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 367 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANK 426
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 427 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/472 (39%), Positives = 264/472 (55%), Gaps = 33/472 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++R AA GA A+ E + +GGTCV G VPKK++
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGXVPKKVMW 70
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+ S + +G+ E + +W + ++A + RL IY+N L + I +I G
Sbjct: 71 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 193 GKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKPEK 247
DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P +
Sbjct: 130 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGR 189
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF---- 303
IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 190 SVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNXTEELENAGVEVLKFS 249
Query: 304 HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
+E + +++ + G L V T VD ++A GR PNTK+L L K+G++
Sbjct: 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDXL---LWAIGRVPNTKDLSLNKLGIQ 306
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDYSA 415
G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY+
Sbjct: 307 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNN 366
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK 473
+P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V K
Sbjct: 367 IPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVXANK 426
Query: 474 TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 427 EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/474 (39%), Positives = 265/474 (55%), Gaps = 35/474 (7%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+D IG GSGG+ ++R AA GA A+ E + +GGTCV GCVPKK++
Sbjct: 4 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMW 53
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAE-LQRLTGI-YKNILINAGITLIE 190
+ S + +G+ E + +W + ++A + RL I Y+N L + I +I
Sbjct: 54 NTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAXYVSRLNAIXYQNNLTKSHIEIIR 112
Query: 191 GRGKIV-DPH-TVDVDGKLYSARHILISVGGRPFIP---DIPGSEYAIDSDAALDLPSKP 245
G DP T++V GK Y+A HILI+ GG P P IPG+ I SD L P
Sbjct: 113 GHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELP 172
Query: 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF-- 303
+ IVG GYIA+E AGI S L S+ + IR KVLR FD I E++ G+E
Sbjct: 173 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLK 232
Query: 304 --HTEESPQ-------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVG 354
+E + +++ + G L V T VD ++A GR PNTK+L L K+G
Sbjct: 233 FSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL---LWAIGRVPNTKDLSLNKLG 289
Query: 355 VKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ-AEPTKPDY 413
++ G I VDE+ T V I+AVGDV + LTPVA+ G LA LF+ E +K DY
Sbjct: 290 IQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDY 349
Query: 414 SAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLC 471
+ +P+ VFS PPIG VGL+E++AI +YG ++ ++ +F P+ ++ + MK+V
Sbjct: 350 NNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCA 409
Query: 472 AKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
K KV+G+HM G E++QGFAVAVK G TKADFD TV +HPT++EE VTLR
Sbjct: 410 NKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 463
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 262/475 (55%), Gaps = 33/475 (6%)
Query: 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKK 129
HYD+ IG GSGGV ++R AA++GA + E +GGTCV GCVPKK
Sbjct: 11 HYDY--LVIGGGSGGVASARRAASYGAKTLLVE----------AKALGGTCVNVGCVPKK 58
Query: 130 LLVYASKFSHEFDESNGFGWKYGTEP---QH---DWSTLIANKNAELQRLTGIYKNILIN 183
++ YAS + +N +G Y P +H +W ++A + RL GIY+ L
Sbjct: 59 VMWYASDLATRVSHANEYGL-YQNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEK 117
Query: 184 AGITLIEGRGKIVDPHTVDVDGK-----LYSARHILISVGGRPFIPD-IPGSEYAIDSDA 237
+ ++ G + V+V + +YSA HIL++ GG+ P+ IPG E DSD
Sbjct: 118 EKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGFELGTDSDG 177
Query: 238 ALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
L +P+K+ +VG GYI +E AG+F GL SE H+ IR + VLR FDE I++ + +
Sbjct: 178 FFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYV 237
Query: 298 LRGIEFHTEESPQAILKSTD-GSLSVKTNKG-TVDGFSHVMFATGRRPNTKNLGLEKVGV 355
GI H + K+ + L + N ++D +++ GR+ + +G E VG+
Sbjct: 238 KEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGI 296
Query: 356 KMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEP---TKPD 412
K+ + I DEY T VP+I+++GDV ++ LTPVA+ G L+ LF E K D
Sbjct: 297 KLNSHDQIIADEYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLD 356
Query: 413 YSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVL 470
Y VPS +FS P G +G+SE++AI++YG +I V+ + F + + K+V
Sbjct: 357 YENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVC 416
Query: 471 CAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525
KV+GLH+ G+ + EI+QGF VA+K G TKADFD V +HPT+AEE VT+R
Sbjct: 417 AGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTMR 471
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 193/506 (38%), Positives = 275/506 (54%), Gaps = 36/506 (7%)
Query: 46 LYFQCRRRHVAARAKSDNGAE-LPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELP 104
LYFQ S NG E LP YD+DL IG GSGG+ A++ AA +G V + L
Sbjct: 18 LYFQ-----------SMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMV--LD 64
Query: 105 FSTISS-ETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLI 163
F T + T G+GGTCV GC+PKKL+ A+ +S +GWK +HDW +I
Sbjct: 65 FVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMI 124
Query: 164 ANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVG 218
+ L Y+ L + G+ + PH + K+YSA LI+ G
Sbjct: 125 EAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATG 184
Query: 219 GRPFIPDIPG-SEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ 277
RP IPG EY I SD LP P K +VG Y+ALE AG +G+ +V V +R
Sbjct: 185 ERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 244
Query: 278 KKVLRGFDEDIRDFVAEQMSLRGIEFHTEESP---QAILKSTDGSLSV----KTNKGTVD 330
+LRGFD+D+ + + E M GI+F + P + I T G L V ++ ++
Sbjct: 245 I-LLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIE 303
Query: 331 G-FSHVMFATGRRPNTKNLGLEKVGVKMT-KNGAIEVDEYSGTAVPSIWAVGDV-TDRIN 387
G ++ VM A GR T+ +GLE VGVK+ K G I V + T VP I+A+GD+ D++
Sbjct: 304 GEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVE 363
Query: 388 LTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDV 445
LTPVA+ G LA+ L+ K DY VP+ VF+ G GLSEE+A++++G+ I+V
Sbjct: 364 LTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 423
Query: 446 FTANFRPLKATL-SGLPDRIFMKLVLCAKTN-KVLGLHMCGEDAPEIVQGFAVAVKAGLT 503
+ + F PL+ T+ S ++ + K++ K N +V+G H+ G +A E+ QGFA A+K GLT
Sbjct: 424 YHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLT 483
Query: 504 KADFDATVGVHPTAAEEFVTLRTPTR 529
K D+T+G+HP AE F TL R
Sbjct: 484 KKQLDSTIGIHPVCAEVFTTLSVTKR 509
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 189/494 (38%), Positives = 271/494 (54%), Gaps = 25/494 (5%)
Query: 58 RAKSDNGAE-LPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISS-ETTGG 115
R NG E LP YD+DL IG GSGG+ A++ AA +G V + L F T + T G
Sbjct: 17 RGSHMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMV--LDFVTPTPLGTRWG 74
Query: 116 VGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTG 175
+GGTCV GC+PKKL+ A+ +S +GWK +HDW +I + L
Sbjct: 75 LGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNW 134
Query: 176 IYKNILINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVGGRPFIPDIPG-S 229
Y+ L + G+ + PH + K+YSA LI+ G RP IPG
Sbjct: 135 GYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDK 194
Query: 230 EYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIR 289
EY I SD LP P K +VG Y+ALE AG +G+ +V V +R +LRGFD+D+
Sbjct: 195 EYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRGFDQDMA 253
Query: 290 DFVAEQMSLRGIEFHTEESP---QAILKSTDGSLSV----KTNKGTVDG-FSHVMFATGR 341
+ + E M GI+F + P + I T G L V ++ ++G ++ VM A GR
Sbjct: 254 NKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313
Query: 342 RPNTKNLGLEKVGVKMT-KNGAIEVDEYSGTAVPSIWAVGDV-TDRINLTPVALMEGGAL 399
T+ +GLE VGVK+ K G I V + T VP I+A+GD+ D++ LTPVA+ G L
Sbjct: 314 DACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLL 373
Query: 400 AKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATL 457
A+ L+ K DY VP+ VF+ G GLSEE+A++++G+ I+V+ + F PL+ T+
Sbjct: 374 AQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTI 433
Query: 458 -SGLPDRIFMKLVLCAKTN-KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHP 515
S ++ + K++ K N +V+G H+ G +A E+ QGFA A+K GLTK D+T+G+HP
Sbjct: 434 PSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHP 493
Query: 516 TAAEEFVTLRTPTR 529
AE F TL R
Sbjct: 494 VCAEVFTTLSVTKR 507
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 189/494 (38%), Positives = 271/494 (54%), Gaps = 25/494 (5%)
Query: 58 RAKSDNGAE-LPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISS-ETTGG 115
R NG E LP YD+DL IG GSGG+ A++ AA +G V + L F T + T G
Sbjct: 17 RGSHMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMV--LDFVTPTPLGTRWG 74
Query: 116 VGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTG 175
+GGTCV GC+PKKL+ A+ +S +GWK +HDW +I + L
Sbjct: 75 LGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNW 134
Query: 176 IYKNILINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVGGRPFIPDIPG-S 229
Y+ L + G+ + PH + K+YSA LI+ G RP IPG
Sbjct: 135 GYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDK 194
Query: 230 EYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIR 289
EY I SD LP P K +VG Y+ALE AG +G+ +V V +R +LRGFD+D+
Sbjct: 195 EYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRGFDQDMA 253
Query: 290 DFVAEQMSLRGIEFHTEESP---QAILKSTDGSLSV----KTNKGTVDG-FSHVMFATGR 341
+ + E M GI+F + P + I T G L V ++ ++G ++ VM A GR
Sbjct: 254 NKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313
Query: 342 RPNTKNLGLEKVGVKMT-KNGAIEVDEYSGTAVPSIWAVGDV-TDRINLTPVALMEGGAL 399
T+ +GLE VGVK+ K G I V + T VP I+A+GD+ D++ LTPVA+ G L
Sbjct: 314 DACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLL 373
Query: 400 AKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATL 457
A+ L+ K DY VP+ VF+ G GLSEE+A++++G+ I+V+ + F PL+ T+
Sbjct: 374 AQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTI 433
Query: 458 -SGLPDRIFMKLVLCAKTN-KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHP 515
S ++ + K++ K N +V+G H+ G +A E+ QGFA A+K GLTK D+T+G+HP
Sbjct: 434 PSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHP 493
Query: 516 TAAEEFVTLRTPTR 529
AE F TL R
Sbjct: 494 VCAEVFTTLSVTKR 507
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 188/489 (38%), Positives = 270/489 (55%), Gaps = 25/489 (5%)
Query: 63 NGAE-LPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISS-ETTGGVGGTC 120
NG E LP YD+DL IG GSGG+ A++ AA +G V + L F T + T G+GGTC
Sbjct: 16 NGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMV--LDFVTPTPLGTRWGLGGTC 73
Query: 121 VLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNI 180
V GC+PKKL+ A+ +S +GWK +HDW +I + L Y+
Sbjct: 74 VNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVA 133
Query: 181 LINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVGGRPFIPDIPG-SEYAID 234
L + G+ + PH + K+YSA LI+ G RP IPG EY I
Sbjct: 134 LREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCIS 193
Query: 235 SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAE 294
SD LP P K +VG Y+ALE AG +G+ +V V +R +LRGFD+D+ + + E
Sbjct: 194 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRGFDQDMANKIGE 252
Query: 295 QMSLRGIEFHTEESP---QAILKSTDGSLSV----KTNKGTVDG-FSHVMFATGRRPNTK 346
M GI+F + P + I T G L V ++ ++G ++ VM A GR T+
Sbjct: 253 HMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTR 312
Query: 347 NLGLEKVGVKMT-KNGAIEVDEYSGTAVPSIWAVGDV-TDRINLTPVALMEGGALAKTLF 404
+GLE VGVK+ K G I V + T VP I+A+GD+ D++ LTPVA+ G LA+ L+
Sbjct: 313 KIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 372
Query: 405 QAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATL-SGLP 461
K DY VP+ VF+ G GLSEE+A++++G+ I+V+ + F PL+ T+ S
Sbjct: 373 AGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDN 432
Query: 462 DRIFMKLVLCAKTN-KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEE 520
++ + K++ K N +V+G H+ G +A E+ QGFA A+K GLTK D+T+G+HP AE
Sbjct: 433 NKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 492
Query: 521 FVTLRTPTR 529
F TL R
Sbjct: 493 FTTLSVTKR 501
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 266/489 (54%), Gaps = 24/489 (4%)
Query: 62 DNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISS-ETTGGVGGTC 120
++ + P YDFDL IG GSGG+ A++ AA F V + L F T + T G+GGTC
Sbjct: 2 NDSKDAPKSYDFDLIIIGGGSGGLAAAKEAAKFDKKVMV--LDFVTPTPLGTNWGLGGTC 59
Query: 121 VLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNI 180
V GC+PKKL+ A+ +S +GWK +HDW + + + L Y+
Sbjct: 60 VNVGCIPKKLMHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVA 119
Query: 181 LINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVGGRPFIPDIPGS-EYAID 234
L + GK + PH + K+YSA LI+ G RP IPG EY I
Sbjct: 120 LREKKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCIS 179
Query: 235 SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAE 294
SD LP P K +VG Y+ALE AG +G+ +V V +R +LRGFD+D+ + + E
Sbjct: 180 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRGFDQDMANKIGE 238
Query: 295 QMSLRGIEFHTEESP---QAILKSTDGSLSV-----KTNKGTVDGFSHVMFATGRRPNTK 346
M GI+F + P + I T G L V + + D F+ V+ A GR T+
Sbjct: 239 HMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTR 298
Query: 347 NLGLEKVGVKMT-KNGAIEVDEYSGTAVPSIWAVGDVTD-RINLTPVALMEGGALAKTLF 404
+GLE VGVK+ K G I V + T VP I+A+GD+ + ++ LTPVA+ G LA+ L+
Sbjct: 299 TIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLY 358
Query: 405 QAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATL-SGLP 461
K DY VP+ VF+ G GLSEE+A++++G+ I+V+ + F PL+ T+ S
Sbjct: 359 GGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDN 418
Query: 462 DRIFMKLVLCAKTN-KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEE 520
++ + K++ K N +V+G H+ G +A E+ QGFA A+K GLTK D+T+G+HP AE
Sbjct: 419 NKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAEI 478
Query: 521 FVTLRTPTR 529
F TL R
Sbjct: 479 FTTLSVTKR 487
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 266/489 (54%), Gaps = 24/489 (4%)
Query: 62 DNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISS-ETTGGVGGTC 120
++ + P YDFDL IG GSGG+ A++ AA F V + L F T + T G+GGTC
Sbjct: 2 NDSKDAPKSYDFDLIIIGGGSGGLAAAKEAAKFDKKVMV--LDFVTPTPLGTRWGLGGTC 59
Query: 121 VLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNI 180
V GC+PKKL+ A+ +S +GWK +HDW + + + L Y+
Sbjct: 60 VNVGCIPKKLMHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVA 119
Query: 181 LINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVGGRPFIPDIPGS-EYAID 234
L + GK + PH + K+YSA LI+ G RP IPG EY I
Sbjct: 120 LREKKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCIS 179
Query: 235 SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAE 294
SD LP P K +VG Y+ALE AG +G+ +V V +R +LRGFD+D+ + + E
Sbjct: 180 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRGFDQDMANKIGE 238
Query: 295 QMSLRGIEFHTEESP---QAILKSTDGSLSV-----KTNKGTVDGFSHVMFATGRRPNTK 346
M GI+F + P + I T G L V + + D F+ V+ A GR T+
Sbjct: 239 HMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTR 298
Query: 347 NLGLEKVGVKMT-KNGAIEVDEYSGTAVPSIWAVGDVTD-RINLTPVALMEGGALAKTLF 404
+GLE VGVK+ K G I V + T VP I+A+GD+ + ++ LTPVA+ G LA+ L+
Sbjct: 299 TIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLY 358
Query: 405 QAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATL-SGLP 461
K DY VP+ VF+ G GLSEE+A++++G+ I+V+ + F PL+ T+ S
Sbjct: 359 GGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDN 418
Query: 462 DRIFMKLVLCAKTN-KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEE 520
++ + K++ K N +V+G H+ G +A E+ QGFA A+K GLTK D+T+G+HP AE
Sbjct: 419 NKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAEI 478
Query: 521 FVTLRTPTR 529
F TL R
Sbjct: 479 FTTLSVTKR 487
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 255/480 (53%), Gaps = 17/480 (3%)
Query: 65 AELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRG 124
A + YD+DL IG GS G+ ++ A GA VA + T + T GVGGTCV G
Sbjct: 2 APVQGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVG 61
Query: 125 CVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINA 184
C+PKKL+ AS E+ +GW + + DW L+ + ++ + + + L +
Sbjct: 62 CIPKKLMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDK 121
Query: 185 GITLIEGRGKIVDPHTVDVDGK----LYSARHILISVGGRPFIPDIPGS-EYAIDSDAAL 239
+ I G G VD HT+ K +A+ +I+VGGRP PDIPG+ EY I SD
Sbjct: 122 KVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLF 181
Query: 240 DLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLR 299
L +P K +VG GYI LE AG GL E V +R VLRGFD+ + + VA M R
Sbjct: 182 SLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRGFDQQMAELVAASMEER 240
Query: 300 GIEFHTEESPQAILKSTDGSLSVK-----TNKGTVDGFSHVMFATGRRPNTKNLGLEKVG 354
GI F + P ++ K DG L VK T + + D + V++A GR+ +L L G
Sbjct: 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAG 300
Query: 355 VKMTKNGAIEVDEYSGTAVPSIWAVGDVT-DRINLTPVALMEGGALAKTLFQAEPTKPDY 413
V + K+ I VD T V +I+AVGD+ + LTPVA++ G LA+ L+ + DY
Sbjct: 301 VTVQKD-KIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDY 359
Query: 414 SAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDR-IFMKLVL 470
V + VF+ VGLSEE A++++G +I+VF ++P + + R ++K V
Sbjct: 360 KDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVA 419
Query: 471 CAKTN-KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTR 529
+ +V GLH G A E++QGFA A+K+GLT TVG+HPT AEEF L R
Sbjct: 420 ERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAITKR 479
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 255/480 (53%), Gaps = 17/480 (3%)
Query: 65 AELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRG 124
A + YD+DL IG GS G+ ++ A GA VA + T + T GVGGTCV G
Sbjct: 2 APVQGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVG 61
Query: 125 CVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINA 184
C+PKKL+ AS E+ +GW + + DW L+ + ++ + + + L +
Sbjct: 62 CIPKKLMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDK 121
Query: 185 GITLIEGRGKIVDPHTVDVDGK----LYSARHILISVGGRPFIPDIPGS-EYAIDSDAAL 239
+ I G G VD HT+ K +A+ +I+VGGRP PDIPG+ EY I SD
Sbjct: 122 KVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLF 181
Query: 240 DLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLR 299
L +P K +VG GYI LE AG GL E V +R VLRGFD+ + + VA M R
Sbjct: 182 SLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRGFDQQMAELVAASMEER 240
Query: 300 GIEFHTEESPQAILKSTDGSLSVK-----TNKGTVDGFSHVMFATGRRPNTKNLGLEKVG 354
GI F + P ++ K DG L VK T + + D + V++A GR+ +L L G
Sbjct: 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAG 300
Query: 355 VKMTKNGAIEVDEYSGTAVPSIWAVGDVT-DRINLTPVALMEGGALAKTLFQAEPTKPDY 413
V + K+ I VD T V +I+AVGD+ + LTPVA++ G LA+ L+ + DY
Sbjct: 301 VTVQKD-KIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDY 359
Query: 414 SAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDR-IFMKLVL 470
V + VF+ VGLSEE A++++G +I+VF ++P + + R ++K V
Sbjct: 360 KDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVA 419
Query: 471 CAKTN-KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTR 529
+ +V GLH G A E++QGFA A+K+GLT TVG+HPT AEEF L R
Sbjct: 420 ERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAITKR 479
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/474 (37%), Positives = 253/474 (53%), Gaps = 17/474 (3%)
Query: 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKL 130
YD+DL IG GS G+ ++ A GA VA + T + T GVGGTCV GC+PKKL
Sbjct: 4 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKL 63
Query: 131 LVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIE 190
+ AS E+ +GW + + DW L+ + ++ + + + L + + I
Sbjct: 64 MHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYIN 123
Query: 191 GRGKIVDPHTVDVDGK----LYSARHILISVGGRPFIPDIPGS-EYAIDSDAALDLPSKP 245
G G VD HT+ K +A+ +I+VGGRP PDIPG+ EY I SD L +P
Sbjct: 124 GLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREP 183
Query: 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHT 305
K +VG GYI LE AG GL E V +R VLRGFD+ + + VA M RGI F
Sbjct: 184 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRGFDQQMAELVAASMEERGIPFLR 242
Query: 306 EESPQAILKSTDGSLSVK-----TNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKN 360
+ P ++ K DG L VK T + + D + V++A GR+ +L L GV + K+
Sbjct: 243 KTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKD 302
Query: 361 GAIEVDEYSGTAVPSIWAVGDVT-DRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSA 419
I VD T V +I+AVGD+ + LTPVA++ G LA+ L+ + DY V +
Sbjct: 303 -KIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATT 361
Query: 420 VFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDR-IFMKLVLCAKTN- 475
VF+ VGLSEE A++++G +I+VF ++P + + R ++K V +
Sbjct: 362 VFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQ 421
Query: 476 KVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTR 529
+V GLH G A E++QGFA A+K+GLT TVG+HPT AEEF L R
Sbjct: 422 RVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAITKR 475
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 255/479 (53%), Gaps = 28/479 (5%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
FDL IG GSGG+ ++ AA G VA+ + T G+GGTCV GC+PKKL+
Sbjct: 7 FDLLVIGGGSGGLACAKEAAQLGKKVAVADY-VEPSPRGTKWGLGGTCVNVGCIPKKLMH 65
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
A+ +++ +GW+ QH+W T+ ++ L ++ L + + +
Sbjct: 66 QAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 125
Query: 193 GKIVDPHTV---DVDGK--LYSARHILISVGGRPFIP-DIPGS-EYAIDSDAALDLPSKP 245
VD HTV D GK L SA HI+I+ GGRP P + G+ EY I SD L P
Sbjct: 126 ASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESP 185
Query: 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF-- 303
K +VG Y+ALE AG +G+ + V +R LRGFD+ + V E M G +F
Sbjct: 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP-LRGFDQQMSSLVTEHMESHGTQFLK 244
Query: 304 -----HTEESPQAILKST-DGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
H ++ P L+ T + S K + GT F V++A GR P T+ L LEK G+
Sbjct: 245 GCVPSHIKKLPTNQLQVTWEDHASGKEDTGT---FDTVLWAIGRVPETRTLNLEKAGIST 301
Query: 358 T-KNGAIEVDEYSGTAVPSIWAVGDVTD-RINLTPVALMEGGALAKTLFQAEPTKPDYSA 415
KN I VD T+VP I+A+GDV + R LTP A+ G LA+ LF T DYS
Sbjct: 302 NPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSN 361
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGL-PDRIFMKLVLCA 472
VP+ VF+ G VGLSEE+A+ +G ++V+ A ++PL+ T++ + ++K+V C
Sbjct: 362 VPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMV-CM 420
Query: 473 KT--NKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTR 529
+ VLGLH G +A E+ QGFA+ +K G + A TVG+HPT +EE V L R
Sbjct: 421 REPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKR 479
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 255/479 (53%), Gaps = 28/479 (5%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
FDL IG GSGG+ ++ AA G VA+ + T G+GGTCV GC+PKKL+
Sbjct: 33 FDLLVIGGGSGGLACAKEAAQLGKKVAVADY-VEPSPRGTKWGLGGTCVNVGCIPKKLMH 91
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
A+ +++ +GW+ QH+W T+ ++ L ++ L + + +
Sbjct: 92 QAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 151
Query: 193 GKIVDPHTV---DVDGK--LYSARHILISVGGRPFIP-DIPGS-EYAIDSDAALDLPSKP 245
VD HTV D GK L SA HI+I+ GGRP P + G+ EY I SD L P
Sbjct: 152 ASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESP 211
Query: 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF-- 303
K +VG Y+ALE AG +G+ + V +R LRGFD+ + V E M G +F
Sbjct: 212 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP-LRGFDQQMSSLVTEHMESHGTQFLK 270
Query: 304 -----HTEESPQAILKST-DGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
H ++ P L+ T + S K + GT F V++A GR P T+ L LEK G+
Sbjct: 271 GCVPSHIKKLPTNQLQVTWEDHASGKEDTGT---FDTVLWAIGRVPETRTLNLEKAGIST 327
Query: 358 T-KNGAIEVDEYSGTAVPSIWAVGDVTD-RINLTPVALMEGGALAKTLFQAEPTKPDYSA 415
KN I VD T+VP I+A+GDV + R LTP A+ G LA+ LF T DYS
Sbjct: 328 NPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSN 387
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGL-PDRIFMKLVLCA 472
VP+ VF+ G VGLSEE+A+ +G ++V+ A ++PL+ T++ + ++K+V C
Sbjct: 388 VPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMV-CM 446
Query: 473 KT--NKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTR 529
+ VLGLH G +A E+ QGFA+ +K G + A TVG+HPT +EE V L R
Sbjct: 447 REPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKR 505
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 263/508 (51%), Gaps = 69/508 (13%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+DL IG GSGG+ A+R AA A VA+ E +GGTCV GCVPKK++
Sbjct: 3 YDLIVIGGGSGGMAAARRAARHNAKVALVE----------KSRLGGTCVNVGCVPKKIMF 52
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
A+ + S +G + T+ + L+ ++ +QRL IY+ L + L EG
Sbjct: 53 NAASVHDILENSRHYG--FDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT 110
Query: 193 GKIVDPHTVDVDG--------------KLYSARHILISVGGRPFIPDIPGSEYAIDSDAA 238
+ + + + G ++ R+ILI+VG +P P + G E I SD
Sbjct: 111 ASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIENTISSDEF 170
Query: 239 LDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSL 298
++ + +KI IVG GYIA+E + L + ++F R ++LR FDE + + + M
Sbjct: 171 FNI-KESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKK 229
Query: 299 RGIEFHTEESPQAILKSTDGSLSVKTNKGTV-DGFSHVMFATGRRPNTKNLGLEKVGVKM 357
I T I K +D +LS+ + G + + F HV++ GR P+T+NL LEK+ V+
Sbjct: 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVE- 288
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGD------------------------------VTDRI- 386
T N I VDE T+V +I+AVGD VT+ I
Sbjct: 289 TNNNYIVVDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIF 348
Query: 387 ---NLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG-- 441
LTPVA+ G LA LF + K +Y +P+ +FS PPIG +GLSEE AIQ YG
Sbjct: 349 YNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKE 408
Query: 442 DIDVFTANFRPLKATLSG----LPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVA 497
++ ++ + F L ++ L ++ ++KLV K + GLH+ G +A EIVQGFAVA
Sbjct: 409 NVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVA 468
Query: 498 VKAGLTKADFDATVGVHPTAAEEFVTLR 525
+K TK DFD T+ +HPTAAEEF+TL+
Sbjct: 469 LKMNATKKDFDETIPIHPTAAEEFLTLQ 496
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 253/488 (51%), Gaps = 42/488 (8%)
Query: 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTG---GVGGTCVLRGCVP 127
YD+D IG G GG+ +++ AA GA V L F + + G G+GGTCV GCVP
Sbjct: 41 YDYDYVVIGGGPGGMASAKEAAAHGARV----LLFDYVKPSSQGTKWGIGGTCVNVGCVP 96
Query: 128 KKLLVYASKFSHEFD-ESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGI 186
KKL+ YA F +S +GWK+ +HDW L+ + ++ L Y L ++ +
Sbjct: 97 KKLMHYAGHMGSIFKLDSKAYGWKFDN-LKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKV 155
Query: 187 TLIEGRGKIVDPHTVD--VDGKL-----YSARHILISVGGRPFIPD-IPGS-EYAIDSDA 237
I G K+ D +TV + G L + ++ILI+ G RP IPD + G+ E +I SD
Sbjct: 156 KYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDDVEGAKELSITSDD 215
Query: 238 ALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297
L P K +VG Y+ALE +G + L +V V +R VLRGFD+ V M
Sbjct: 216 IFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI-VLRGFDQQCAVKVKLYME 274
Query: 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
+G+ F P+ + K D L V+ + T + + V++A GR+ + L LE + + +
Sbjct: 275 EQGVMFKNGILPKKLTKMDDKIL-VEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNV 333
Query: 358 TK-NGAIEVDEYSGTAVPSIWAVGDVTDRI-NLTPVALMEGGALAKTLFQAEPTKPDYSA 415
K N I D S T +PSI+AVGDV + + L PVA+ G LA+ LF+ DYS
Sbjct: 334 NKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSY 393
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRI--------- 464
+P+++++ G G SEE+A + YG +++VF F L+ + I
Sbjct: 394 IPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDL 453
Query: 465 ------FMKLVLCAKT--NKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPT 516
KLV C K N+V+G H G +A E+ QG A+A++ + K DFD +G+HPT
Sbjct: 454 DVSSTCLAKLV-CLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPT 512
Query: 517 AAEEFVTL 524
AE F+ L
Sbjct: 513 DAESFMNL 520
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 229/457 (50%), Gaps = 27/457 (5%)
Query: 74 DLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVY 133
+ +GAG GG A+ AA G V I E G +GG C+ GC+P K L+
Sbjct: 5 ETLVVGAGPGGYVAAIRAAQLGQKVTIVE----------KGNLGGVCLNVGCIPSKALIS 54
Query: 134 ASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRG 193
AS + S G K D++ + K + +++LTG + +L + +++G
Sbjct: 55 ASHRYEQAKHSEEMGIK-AENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEA 113
Query: 194 KIVDPHTVDV----DGKLYSARHILISVGGRPF-IPDIPGSEYAIDSDAALDLPSKPEKI 248
VD +TV V + Y+ ++ +I+ G RP +P+ S +DS AL+L P+ +
Sbjct: 114 YFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDSTGALNLGEVPKSL 173
Query: 249 AIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEES 308
++GGGYI +E ++ ++V + ++L GF++ + + +++ +G+E T
Sbjct: 174 VVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNAL 233
Query: 309 PQAILKSTDGSLSVKTNKG---TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEV 365
+ + DG G T+D +V+ GRRPNT LGLE++G+KMT G IEV
Sbjct: 234 AKGAEEREDGVTVTYEANGETKTIDA-DYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEV 292
Query: 366 DEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPP 425
D+ T+VP+I+A+GD+ L A EG A+ + P+ DY A+P+ VFS P
Sbjct: 293 DQQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAI-AGHPSAVDYVAIPAVVFSDPE 351
Query: 426 IGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLP---DRIFMKLVLCAKTNKVLGLHM 482
VG E+QA E IDV A F P A L F+KLV+ + ++G +
Sbjct: 352 CASVGYFEQQAKDE--GIDVIAAKF-PFAANGRALALNDTDGFLKLVVRKEDGVIIGAQI 408
Query: 483 CGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAE 519
G +A +++ +A++AG+T D T+ HPT E
Sbjct: 409 IGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGE 445
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 229/470 (48%), Gaps = 37/470 (7%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
FD+ IGAG GG A+ +A G A+ E E +GGTC+ GC+P K L+
Sbjct: 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIE---KYKGKEGKTALGGTCLNVGCIPSKALL 60
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+S HE ES E D T+IA K+ ++ LTG +++ G+TL EG
Sbjct: 61 DSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH 120
Query: 193 GKIVDPHTVDV---DG--KLYSARHILISVGGRPF-IPDIP-GSEYAIDSDAALDLPSKP 245
GK++ V+V DG ++ +++++ G +P IP P + +DS ALD + P
Sbjct: 121 GKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVP 180
Query: 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHT 305
K+ ++G G I LE +++ L +EV V K L DE Q++ + T
Sbjct: 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDE--------QVAKEAQKILT 232
Query: 306 EESPQAILKSTDGSLSVKTNKGTV----------DGFSHVMFATGRRPNTKNLGLEKVGV 355
++ + +L + VK + TV F ++ A GRRP T +L GV
Sbjct: 233 KQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGV 292
Query: 356 KMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSA 415
+ + G I VD+Y T+VP ++A+GDV L A EG +A+ + + +Y
Sbjct: 293 TLDERGFIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERI-AGHKAQMNYDL 351
Query: 416 VPSAVFSQPPIGQVGLSEEQAIQEYGDIDV----FTANFRPLKATLSGLPDRIFMKLVLC 471
+P+ +++ P I VG +E+ E I+V F A+ R + A + F+K++
Sbjct: 352 IPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAG----FVKVIAD 407
Query: 472 AKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521
AKT++VLG+H+ G A E+VQ A+A++ G + D V HP +E
Sbjct: 408 AKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEAL 457
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 223/461 (48%), Gaps = 19/461 (4%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
FD+ IGAG GG A+ AA G A E I E +GGTC+ GC+P K L+
Sbjct: 4 FDVVVIGAGPGGYVAAIRAAQLGLKTACIE---KYIGKEGKVALGGTCLNVGCIPSKALL 60
Query: 133 YASKFSHEFDESNGFGWKYGTEPQH---DWSTLIANKNAELQRLTGIYKNILINAGITLI 189
+S HE E+ +G E + D ++A K ++ LTG + G+T
Sbjct: 61 DSSYKYHEAKEAFKV---HGIEAKGVTIDVPAMVARKANIVKNLTGGIATLFKANGVTSF 117
Query: 190 EGRGKIVDPHTVDV---DGK--LYSARHILISVGGRPF-IPDIPGSE-YAIDSDAALDLP 242
EG GK++ V+V DGK + A +++I+ G RP IP P S+ +DS AL+
Sbjct: 118 EGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLSDDIIVDSTGALEFQ 177
Query: 243 SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRG-- 300
+ P+K+ ++G G I LE +++ L +EV V K L DE I + ++ +G
Sbjct: 178 AVPKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLN 237
Query: 301 IEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKN 360
I + + K N + F ++ A GRRP T +L GV + +
Sbjct: 238 IRLGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDER 297
Query: 361 GAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAV 420
G I VD++ T+VP ++A+GDV L A EG +A+ + + +Y +PS +
Sbjct: 298 GFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERI-AGHKAQMNYDLIPSVI 356
Query: 421 FSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGL 480
++ P I VG +E+ E +++V T F ++ +K++ AKT++VLG+
Sbjct: 357 YTHPEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGV 416
Query: 481 HMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521
H+ G A E+VQ A+ ++ G + D V HPT +E
Sbjct: 417 HVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEAL 457
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 220/461 (47%), Gaps = 30/461 (6%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+DL IG G GG A+ AA G V E G VGG C+ GC+P K L+
Sbjct: 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVE----------AGEVGGVCLNVGCIPTKALL 56
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
+A++ H + GFG K +P+ D L ++ +++LTG +L G+ L+ G
Sbjct: 57 HAAETLHHLKVAEGFGLK--AKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGF 114
Query: 193 GKIVDPHTVDVDGKLYSARHILISVGGRPF-IPDIPGSEYAIDSDAALDLPSK-PEKIAI 250
++V P V+V G+ Y A+ ++++ G P + P E DS AL + P+++ +
Sbjct: 115 ARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLV 174
Query: 251 VGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQ 310
+GGG + LE ++ L +EV + ++L D + + + GI T+
Sbjct: 175 IGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAV 234
Query: 311 AILKSTDGSLSVKTNKGTVDGFSHVMFAT-----GRRPNTKNLGLEKVGVKMTKNGAIEV 365
K DG L V+ V+ GR+P T+ LGLEK GVK+ + G I V
Sbjct: 235 GYEKKKDG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRV 293
Query: 366 DEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPP 425
+ T+VP ++A+GD R L M G +A + + DY VPS V++ P
Sbjct: 294 NARMETSVPGVYAIGDAA-RPPLLAHKAMREGLIAAENAAGKDSAFDYQ-VPSVVYTSPE 351
Query: 426 IGQVGLSEEQAIQEYGDIDV----FTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLH 481
VGL+EE+A + + V A+ R L TL G +K+V +T+ +LG+
Sbjct: 352 WAGVGLTEEEAKRAGYKVKVGKFPLAASGRAL--TLGGAEG--MVKVVGDEETDLLLGVF 407
Query: 482 MCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFV 522
+ G A E++ A+A++ G T D TV HPT +E +
Sbjct: 408 IVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLM 448
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 200/402 (49%), Gaps = 19/402 (4%)
Query: 114 GGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRL 173
G +GGTCV GCVP K+++ A+ +H ES G T P D S L+A + A + L
Sbjct: 36 GTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSKLLAQQQARVDEL 95
Query: 174 T-GIYKNILI-NAGITLIEGRGKIVDPHTVDVDGKLYSARHI-----LISVGGRPFIPDI 226
Y+ IL N IT++ G + D ++ V R + L++ G P +P I
Sbjct: 96 RHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPI 155
Query: 227 PG---SEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG 283
PG S Y ++A L + PE++A++G +ALE A F+ L S+V V R R
Sbjct: 156 PGLKESPYWTSTEA-LASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFRE 214
Query: 284 FDEDIRDFVAEQMSLRGIEF--HTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGR 341
D I + V GIE HT+ S A + DG + T G + ++ ATGR
Sbjct: 215 -DPAIGEAVTAAFRAEGIEVLEHTQASQVAHM---DGEFVLTTTHGELRA-DKLLVATGR 269
Query: 342 RPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAK 401
PNT++L L+ GV + GAI +D+ T+ P+I+A GD TD+ VA G A
Sbjct: 270 TPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAI 329
Query: 402 TLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLP 461
+ + D +A+P+ VF+ P + VG SE +A + + D T + L+
Sbjct: 330 NMTGGDAAL-DLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFD 388
Query: 462 DRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLT 503
R F+KLV+ +++++G+ +A E++Q A+A++ +T
Sbjct: 389 TRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMT 430
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 212/441 (48%), Gaps = 20/441 (4%)
Query: 94 FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGT 153
+ A++ +L F T E G +GGTC+ GC+P K L+++S HE S +
Sbjct: 19 YVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVS 78
Query: 154 EPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVD-----GKLY 208
+ D + ++ K+ + LT + + +T ++G GK V P + VD +
Sbjct: 79 NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVV 138
Query: 209 SARHILISVGGRPFIPDIPG----SEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIF 264
+HI+I+ G + +PG + + S AL L P+K+ ++G GYI LE ++
Sbjct: 139 KGKHIIIATGSD--VKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVW 196
Query: 265 SGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDG-SLSVK 323
+ SEV V +++ D +IR + +G++F + + S DG L+V+
Sbjct: 197 GRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVE 256
Query: 324 TNKG---TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVG 380
+ G T+ V+ + GR P T L L+K+GV+ K G I V+E T V ++A+G
Sbjct: 257 PSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIG 316
Query: 381 DVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEY 440
DV L A +G A + L + DY VP V++ P + VG +EEQ ++E
Sbjct: 317 DVIPGPMLAHKAEEDGVACVEYL-AGKVGHVDYDKVPGVVYTNPEVASVGKTEEQ-VKET 374
Query: 441 GDIDVFTANFRPLKATLSGLPDRI--FMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAV 498
G ++ F + + + D +K++ +T+K+LG+H+ +A E++ A+A+
Sbjct: 375 G-VEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIAL 433
Query: 499 KAGLTKADFDATVGVHPTAAE 519
+ + D HPT +E
Sbjct: 434 QYDASSEDIARVCHAHPTMSE 454
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 201/415 (48%), Gaps = 22/415 (5%)
Query: 116 VGGTCVLRGCVPKKLLVYASKFSHE---FDESNGFGWKYGTEPQHDWSTLIANKNAELQR 172
+GGTC+ GC+P K L++ ++ H+ F E + G + P+ D +A K+ + R
Sbjct: 39 LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVAS-PRLDIGQSVAWKDGIVDR 97
Query: 173 LTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPF-IPDIPGSEY 231
LT +L G+ ++ G K++D V+VDG+ H+L++ G +P +P
Sbjct: 98 LTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSSSVELPMLPLGGP 157
Query: 232 AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDF 291
I S AL + P+ + +VGGGYI LE + L ++V V ++++L +D ++
Sbjct: 158 VISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAP 217
Query: 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFS--HVMFATGRRPNTKNLG 349
VAE + GI H S + +G L KG V+ A GRRP TK
Sbjct: 218 VAESLKKLGIALHLGHSVEGY---ENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFN 274
Query: 350 LEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPT 409
LE + +KM AI +DE T++ ++WA+GDV L A+ +G +A+ + +
Sbjct: 275 LECLDLKMN-GAAIAIDERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAE-IIAGKAR 332
Query: 410 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV----FTANFRPLK-ATLSGLPDRI 464
+ + +A+ + F+ P + VG + EQA Q+ D V F AN R + + SG
Sbjct: 333 RFEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSG----- 387
Query: 465 FMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAE 519
F+++V + +LG G E+ FA +++ G D T+ HPT E
Sbjct: 388 FVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGE 442
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 212/456 (46%), Gaps = 27/456 (5%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+DL IGAG GG A+ AA G V + E +GGTC+ GC+P K L+
Sbjct: 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVE---------KEKALGGTCLRVGCIPSKALL 52
Query: 133 YASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR 192
++ +E + G E D L+A+K+ +Q T + + GI +G
Sbjct: 53 ETTERIYEAKKGLLGAKVKGVEL--DLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGT 110
Query: 193 GKIVDPHTVDVD--GKLYSARHILISVGGRPFIPDIPGSEY--AIDSDAALDLPSKPEKI 248
+ + V V+ G+ AR+ILI+ G P IP +Y + S AL P P+++
Sbjct: 111 ARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEALSFPEVPKRL 170
Query: 249 AIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEES 308
+VGGG I LE ++ L +EV V ++L D ++ +G+ T
Sbjct: 171 IVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVR 230
Query: 309 PQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY 368
A++ G+ V+ G V V+ A GRRP T+ L LE G+ + G I VDE+
Sbjct: 231 VTAVVPEAKGA-RVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEH 289
Query: 369 SGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQ 428
T VP I+A+GDV L A EG A + + + DY A+PS V++ P I
Sbjct: 290 LRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRG-FGHVDYQAIPSVVYTHPEIAA 348
Query: 429 VGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRI-----FMKLVLCAKTNKVLGLHMC 483
VG +EE+ ++ G I F P A SG + F+K++ AKT+++LG+H
Sbjct: 349 VGYTEEE-LKAQG-IPYKVGKF-PYSA--SGRARAMGETEGFIKVLAHAKTDRILGVHGI 403
Query: 484 GEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAE 519
G +++ A+A+ + D HP+ +E
Sbjct: 404 GARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSE 439
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 212/442 (47%), Gaps = 24/442 (5%)
Query: 96 ASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNG-FGWKYGTE 154
AS+ +L T E G +GGTC+ GC+P K L++A+ H+ + +G G
Sbjct: 17 ASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEG 76
Query: 155 PQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDG-----KLYS 209
D + + K ++ LTG + + +T +G G H++ V+G ++
Sbjct: 77 VTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLE 136
Query: 210 ARHILISVGGRPF-IPDIPGSEYAI-DSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGL 267
+ +I+ G P +P +P E + S AL LP P+ + ++GGG I LE +++ L
Sbjct: 137 TKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARL 196
Query: 268 TSEVHVFIRQKKVLRGFDEDIRD-FVAEQMSLRGIEFHTEESPQAILKSTDG---SLSVK 323
+EV V + DED+ + V ++F T S + + + +G SL V+
Sbjct: 197 GAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMT--STKVVGGTNNGDSVSLEVE 254
Query: 324 TNKGTVDGFS--HVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGD 381
G + + ++ + GRRP T LGL+K+ V + G +++ ++ T++P ++A+GD
Sbjct: 255 GKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGD 314
Query: 382 VTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG 441
V D+ + + G + +P +Y +P+ +++ P + VG SE++ +E
Sbjct: 315 VVDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGV 374
Query: 442 DIDV----FTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVA 497
V F AN R + + F+K+++ T+++LG+H+ A E++ +A
Sbjct: 375 AYKVGKFPFNANSRAKAVS----TEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLA 430
Query: 498 VKAGLTKADFDATVGVHPTAAE 519
++ G + D T HPT +E
Sbjct: 431 MEYGASSEDVGRTCHAHPTMSE 452
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 216/472 (45%), Gaps = 40/472 (8%)
Query: 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
D D+ IG+G GG A+ AA G F T+ E +GGTC+ GC+P K L
Sbjct: 6 DADVTVIGSGPGGYVAAIKAAQLG---------FKTVCIEKNETLGGTCLNVGCIPSKAL 56
Query: 132 VYASKFSHEFDESNGFGWK--YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLI 189
+ S + H F + +E + + ++ K+ ++ LTG ++ + +
Sbjct: 57 LNNSHYYH-MAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHV 115
Query: 190 EGRGKIVDPHTV---DVDG--KLYSARHILISVGGR--PFIPDIPGSEYAI-DSDAALDL 241
G GKI + V DG ++ ++ILI+ G PF P I E I S AL L
Sbjct: 116 NGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPF-PGITIDEDTIVSSTGALSL 174
Query: 242 PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHV--FIRQKKVLRGFDEDIRDFVAEQMSLR 299
PEK+ ++G G I +E ++ L ++V F+ + G D +I + +
Sbjct: 175 KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-GIDMEISKNFQRILQKQ 233
Query: 300 GIEFHTEESPQAILKSTDGSLSVKTN-----KGTVDGFSHVMFATGRRPNTKNLGLEKVG 354
G +F K +DG + V K V ++ GRRP TKNLGLE++G
Sbjct: 234 GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELG 293
Query: 355 VKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYS 414
+++ G I V+ T +P+I+A+GDV L A EG + + DY+
Sbjct: 294 IELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGM-AGGAVHIDYN 352
Query: 415 AVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV----FTANFRP-LKATLSGLPDRIFMKLV 469
VPS +++ P + VG SEEQ +E + V F AN R A G+ +K++
Sbjct: 353 CVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGM-----VKIL 407
Query: 470 LCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521
T++VLG H+ G A E+V A+A++ G + D HPT +E F
Sbjct: 408 GQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 459
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 216/472 (45%), Gaps = 40/472 (8%)
Query: 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
D D+ IG+G GG A+ AA G F T+ E +GGTC+ GC+P K L
Sbjct: 6 DADVTVIGSGPGGYVAAIKAAQLG---------FKTVCIEKNETLGGTCLNVGCIPSKAL 56
Query: 132 VYASKFSHEFDESNGFGWK--YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLI 189
+ S + H F + +E + + ++ K+ ++ LTG ++ + +
Sbjct: 57 LNNSHYYH-MAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHV 115
Query: 190 EGRGKIVDPHTV---DVDG--KLYSARHILISVGGR--PFIPDIPGSEYAI-DSDAALDL 241
G GKI + V DG ++ ++ILI+ G PF P I E I S AL L
Sbjct: 116 NGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPF-PGITIDEDTIVSSTGALSL 174
Query: 242 PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHV--FIRQKKVLRGFDEDIRDFVAEQMSLR 299
PEK+ ++G G I +E ++ L ++V F+ + G D +I + +
Sbjct: 175 KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-GIDMEISKNFQRILQKQ 233
Query: 300 GIEFHTEESPQAILKSTDGSLSVKTN-----KGTVDGFSHVMFATGRRPNTKNLGLEKVG 354
G +F K +DG + V K V ++ GRRP TKNLGLE++G
Sbjct: 234 GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELG 293
Query: 355 VKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYS 414
+++ G I V+ T +P+I+A+GDV L A EG + + DY+
Sbjct: 294 IELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGM-AGGAVHIDYN 352
Query: 415 AVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV----FTANFRP-LKATLSGLPDRIFMKLV 469
VPS +++ P + VG SEEQ +E + V F AN R A G+ +K++
Sbjct: 353 CVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGM-----VKIL 407
Query: 470 LCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521
T++VLG H+ G A E+V A+A++ G + D HPT +E F
Sbjct: 408 GQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 459
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 216/472 (45%), Gaps = 40/472 (8%)
Query: 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
D D+ IG+G GG A+ AA G F T+ E +GGTC+ GC+P K L
Sbjct: 27 DADVTVIGSGPGGYVAAIKAAQLG---------FKTVCIEKNETLGGTCLNVGCIPSKAL 77
Query: 132 VYASKFSHEFDESNGFGWK--YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLI 189
+ S + H F + +E + + ++ K+ ++ LTG ++ + +
Sbjct: 78 LNNSHYYH-MAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHV 136
Query: 190 EGRGKIVDPHTV---DVDG--KLYSARHILISVGGR--PFIPDIPGSEYAI-DSDAALDL 241
G GKI + V DG ++ ++ILI+ G PF P I E I S AL L
Sbjct: 137 NGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPF-PGITIDEDTIVSSTGALSL 195
Query: 242 PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHV--FIRQKKVLRGFDEDIRDFVAEQMSLR 299
PEK+ ++G G I +E ++ L ++V F+ + G D +I + +
Sbjct: 196 KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-GIDMEISKNFQRILQKQ 254
Query: 300 GIEFHTEESPQAILKSTDGSLSVKTN-----KGTVDGFSHVMFATGRRPNTKNLGLEKVG 354
G +F K +DG + V K V ++ GRRP TKNLGLE++G
Sbjct: 255 GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELG 314
Query: 355 VKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYS 414
+++ G I V+ T +P+I+A+GDV L A EG + + DY+
Sbjct: 315 IELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGM-AGGAVHIDYN 373
Query: 415 AVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV----FTANFRP-LKATLSGLPDRIFMKLV 469
VPS +++ P + VG SEEQ +E + V F AN R A G+ +K++
Sbjct: 374 CVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGM-----VKIL 428
Query: 470 LCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521
T++VLG H+ G A E+V A+A++ G + D HPT +E F
Sbjct: 429 GQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 480
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 219/468 (46%), Gaps = 39/468 (8%)
Query: 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLV 132
+DL IG+G GG + AA G VA+ E + GGTC+ GC+P K L+
Sbjct: 26 YDLIVIGSGPGGYVCAIKAAQLGXKVAVVEKRST---------YGGTCLNVGCIPSKALL 76
Query: 133 YASKFSHEFDES-NGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG 191
+AS+ H+ G + P+ + A+K+A ++ + I +G
Sbjct: 77 HASEXFHQAQHGLEALGVEV-ANPKLNLQKXXAHKDATVKSNVDGVSFLFKKNKIDGFQG 135
Query: 192 RGKIVDPHTVDV-----DGKLYSARHILISVGGRPFIPDIPGSEYAID------SDAALD 240
GK++ V V + ++ A++++I+ G + IPG E A D S AL
Sbjct: 136 TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSD--VAGIPGVEVAFDEKTIVSSTGALA 193
Query: 241 LPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRG 300
L P +VGGG I LE +++ L ++V V +L G D ++ + ++ +G
Sbjct: 194 LEKVPASXIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGXDGEVAKQLQRXLTKQG 253
Query: 301 IEFHTEESPQAILKSTDGSLS----VKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVK 356
I+F +KS DG+ VK + T V+ ATGR+P+T LGL K GV
Sbjct: 254 IDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVV 313
Query: 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAV 416
+ G +E+D + T++ ++A+GDV L A EG A+A+ + + +Y +
Sbjct: 314 LDSRGRVEIDRHFQTSIAGVYAIGDVVRGPXLAHKAEDEGVAVAE-IIAGQAGHVNYDVI 372
Query: 417 PSAVFSQPPIGQVGLSEEQ-----AIQEYGDIDVFTANFRPLKATLSGLPDRIFMKLVLC 471
P V++QP + VG +EE+ + G FTAN R + L F+K++
Sbjct: 373 PGVVYTQPEVASVGKTEEELKAAGVAYKIGKFP-FTANGR----ARAXLQTDGFVKILAD 427
Query: 472 AKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAE 519
+T++VLG H+ G A E + AV + G + D T HPT +E
Sbjct: 428 KETDRVLGGHIIGFGAGEXIHEIAVLXEFGGSSEDLGRTCHAHPTXSE 475
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 217/475 (45%), Gaps = 52/475 (10%)
Query: 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPK 128
+HYD + +GAG GG A+ AA G S AI E + GG C+ GC+P
Sbjct: 4 THYD--VVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW----------GGVCLNVGCIPS 51
Query: 129 KLLVYASKFSHEF-DESNGFG------WKYGTEPQHDWSTLIANKNAELQRLTGIYKNIL 181
K L+ ++ H F ++ FG + YG +D S +A R+ G++ +
Sbjct: 52 KALLRNAELVHIFTKDAKAFGISGEVTFDYGI--AYDRSRKVAEG-----RVAGVHFLMK 104
Query: 182 INAGITLIEGRGKIVDPHTVDVD-----GKLYSARHILISVGGRP-FIPDIPGSEYAIDS 235
N IT I G G D +T+ VD + + + +I+ G +P S +
Sbjct: 105 KNK-ITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTY 163
Query: 236 DAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQ 295
+ + P+ I I G G I +EF + +V + + L D D+ + +Q
Sbjct: 164 EEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQ 223
Query: 296 MSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSH------VMFATGRRPNTKNLG 349
G+ T ++I DG V T T DG + V+ A G PN + G
Sbjct: 224 FKKLGVTILTATKVESI---ADGGSQV-TVTVTKDGVAQELKAEKVLQAIGFAPNVEGYG 279
Query: 350 LEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEP- 408
L+K GV +T AI VD+Y T V I+A+GDV + L VA +G A+T+ AE
Sbjct: 280 LDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETL 339
Query: 409 TKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV----FTANFRPLKATLSGLPDRI 464
T D+ +P A F QP + GL+E+QA E D+ V FTAN KA G P
Sbjct: 340 TLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTAN---AKAHGVGDPSG- 395
Query: 465 FMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAE 519
F+KLV AK ++LG H+ G D E++ +A + LT ++ V HPT +E
Sbjct: 396 FVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSE 450
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 222/475 (46%), Gaps = 44/475 (9%)
Query: 74 DLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVY 133
D+ IG G G A+ AA G F+T E G +GGTC+ GC+P K L+
Sbjct: 7 DVVIIGGGPAGYVAAIKAAQLG---------FNTACVEKRGKLGGTCLNVGCIPSKALL- 56
Query: 134 ASKFSHEFDESNGFGWKYGTEPQHDWSTLIAN----KNAELQRLTGIYKNILINAGITLI 189
SH F + + K G + D +AN K+ +++LTG + + +T
Sbjct: 57 --NNSHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYY 114
Query: 190 EGRGKIVDPHTVDV---DG--------KLYSARHILISVGGR--PFIPDIP-GSEYAIDS 235
+G G D + V DG + ++I+++ G PF P I E + S
Sbjct: 115 KGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPF-PGIEIDEEKIVSS 173
Query: 236 DAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQ 295
AL L P+++ I+GGG I LE ++S L S+V V Q ++ D ++ +
Sbjct: 174 TGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKF 233
Query: 296 MSLRGIEFHTEESPQAILKSTDGSL------SVKTNKGTVDGFSHVMFATGRRPNTKNLG 349
+ +G++F + ++ D ++ KTNK ++ A GRRP LG
Sbjct: 234 LKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLG 293
Query: 350 LEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPT 409
EK+G+++ K G + +D+ + P I VGDVT L A EG A A + +
Sbjct: 294 AEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIA-AVEMLKTGHG 352
Query: 410 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRI---FM 466
+Y+ +PS ++S P + VG +EEQ ++E G ID F P A ++ F+
Sbjct: 353 HVNYNNIPSVMYSHPEVAWVGKTEEQ-LKEAG-IDYKIGKF-PFAANSRAKTNQDTEGFV 409
Query: 467 KLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521
K+++ +KT ++LG H+ G +A E++ +A++ G + D HPT +E F
Sbjct: 410 KILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAF 464
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 215/475 (45%), Gaps = 52/475 (10%)
Query: 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPK 128
+HYD + +GAG GG A+ AA G S AI E + GG C+ GC+P
Sbjct: 2 THYD--VVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW----------GGVCLNVGCIPS 49
Query: 129 KLLVYASKFSHEF-DESNGFG------WKYGTEPQHDWSTLIANKNAELQRLTGIYKNIL 181
K L+ ++ H F ++ FG + YG +D S +A R+ G++
Sbjct: 50 KALLRNAELVHIFTKDAKAFGISGEVTFDYGI--AYDRSRKVAEG-----RVAGVHFLXK 102
Query: 182 INAGITLIEGRGKIVDPHTVDVD-----GKLYSARHILISVGGRP-FIPDIPGSEYAIDS 235
N IT I G G D +T+ VD + + + +I+ G +P S +
Sbjct: 103 KNK-ITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTY 161
Query: 236 DAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQ 295
+ + P+ I I G G I EF + +V + + L D D+ + +Q
Sbjct: 162 EEQILSRELPKSIIIAGAGAIGXEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQ 221
Query: 296 MSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSH------VMFATGRRPNTKNLG 349
G+ T ++I DG V T T DG + V+ A G PN + G
Sbjct: 222 FKKLGVTILTATKVESI---ADGGSQV-TVTVTKDGVAQELKAEKVLQAIGFAPNVEGYG 277
Query: 350 LEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEP- 408
L+K GV +T AI VD+Y T V I+A+GDV + L VA +G A+T+ AE
Sbjct: 278 LDKAGVALTDRKAIGVDDYXRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETL 337
Query: 409 TKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV----FTANFRPLKATLSGLPDRI 464
T D+ +P A F QP + GL+E+QA E D+ V FTAN KA G P
Sbjct: 338 TLGDHRXLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTAN---AKAHGVGDPSG- 393
Query: 465 FMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAE 519
F+KLV AK ++LG H+ G D E++ +A + LT ++ V HPT +E
Sbjct: 394 FVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTXSE 448
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 206/456 (45%), Gaps = 42/456 (9%)
Query: 91 AANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150
AA+ G VAI E + T+ GG C+ GC+P K L++ + E G K
Sbjct: 25 AADEGLKVAIVER-YKTL--------GGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIK 75
Query: 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV------- 203
Y EP+ D L A K+ + RLTG + + + +I+G G+ +DPH ++V
Sbjct: 76 Y-PEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDA 134
Query: 204 --------DGKLYSARHILISVGGR----PFIPDIPGSEYAIDSDAALDLPSKPEKIAIV 251
+ K+ + ++ +I+ G R PFIP+ P IDS AL L P K+ I+
Sbjct: 135 YEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDP---RIIDSSGALALKEVPGKLLII 191
Query: 252 GGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQA 311
GGG I LE ++S L S + V +++G D D+ +Q R A
Sbjct: 192 GGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVA 251
Query: 312 ILKSTDG---SLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY 368
+ DG + + V+ A GR PN K + EK GV +T G IEVD+
Sbjct: 252 VEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQ 311
Query: 369 SGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQ 428
T VP I+A+GD+ + L A+ EG A+ D +P ++ P +
Sbjct: 312 MRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENC-AGHKAYFDARVIPGVAYTSPEVAW 370
Query: 429 VGLSEEQAIQEYGDIDVFTANFRPLKAT---LSGLPDRIFMKLVLCAKTNKVLGLHMCGE 485
VG +E A I ANF P A+ ++ D+ F KL+ A+T +++G + G
Sbjct: 371 VGETELSAKASARKI--TKANF-PWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGP 427
Query: 486 DAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521
+ +++ +A++ G AD T+ HPT E
Sbjct: 428 NGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESI 463
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 206/456 (45%), Gaps = 42/456 (9%)
Query: 91 AANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150
AA+ G VAI E + T+ GG C+ GC+P K L++ + E G K
Sbjct: 25 AADEGLKVAIVER-YKTL--------GGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIK 75
Query: 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV------- 203
Y EP+ D L A K+ + RLTG + + + +I+G G+ +DPH ++V
Sbjct: 76 Y-PEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDA 134
Query: 204 --------DGKLYSARHILISVGGR----PFIPDIPGSEYAIDSDAALDLPSKPEKIAIV 251
+ K+ + ++ +I+ G R PFIP+ P IDS AL L P K+ I+
Sbjct: 135 YEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDP---RIIDSSGALALKEVPGKLLII 191
Query: 252 GGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQA 311
GGG I LE ++S L S + V +++G D D+ +Q R A
Sbjct: 192 GGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVA 251
Query: 312 ILKSTDG---SLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY 368
+ DG + + V+ A GR PN K + EK GV +T G IEVD+
Sbjct: 252 VEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQ 311
Query: 369 SGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQ 428
T VP I+A+GD+ + L A+ EG A+ D +P ++ P +
Sbjct: 312 MRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENC-AGHKAYFDARVIPGVAYTSPEVAW 370
Query: 429 VGLSEEQAIQEYGDIDVFTANFRPLKAT---LSGLPDRIFMKLVLCAKTNKVLGLHMCGE 485
VG +E A I ANF P A+ ++ D+ F KL+ A+T +++G + G
Sbjct: 371 VGETELSAKASARKI--TKANF-PWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGP 427
Query: 486 DAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521
+ +++ +A++ G AD T+ HPT E
Sbjct: 428 NGGDMIGEVYLAIEMGCDAADIGKTIHPHPTLGESI 463
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 188/427 (44%), Gaps = 37/427 (8%)
Query: 115 GVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTE------PQ--HDWSTLIANK 166
G+GG VL CVP K + ++ E + G+ + PQ TL A +
Sbjct: 38 GIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKISLPQIHARVKTLAAAQ 97
Query: 167 NAELQRLTGIYKNILINAGITLIEGRGKIVDP------HTVDV---DGKL--YSARHILI 215
+A++ L++ G+ +I GRG+++D H + DG + A +L+
Sbjct: 98 SADI-------TAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLV 150
Query: 216 SVGGRP-FIPDI-PGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHV 273
+ G P +P P E + DL + P+ + +VG G EF ++ L V V
Sbjct: 151 ATGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTV 210
Query: 274 FIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFS 333
Q VL D D + E + RG+ ++ ++ G L T+ TV+G S
Sbjct: 211 VASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEG-S 269
Query: 334 HVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVAL 393
H + G PNT LGLE+VG+++ + + VD S T I+A GD T + L VA
Sbjct: 270 HALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAA 329
Query: 394 MEGGALAKTLFQAEPTKP-DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRP 452
M+ G +A E P V + VF++P I VG+ Q++ + G + T P
Sbjct: 330 MQ-GRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGV--PQSVIDAGSVAARTIML-P 385
Query: 453 LKATLSGLPDRI---FMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDA 509
L+ + F+K+ T V+G + A E++ AVAV+ +T +
Sbjct: 386 LRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQ 445
Query: 510 TVGVHPT 516
T+ V+P+
Sbjct: 446 TLAVYPS 452
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 171/392 (43%), Gaps = 31/392 (7%)
Query: 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131
+ D+ IG G+ G A R A V + E G G TC GC P KLL
Sbjct: 8 NVDVAIIGTGTAGXGAYRAAKKHTDKVVLIE----------GGAYGTTCARVGCXPSKLL 57
Query: 132 VYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTG-IYKNILINAGITLIE 190
+ A+ S+ +++ FG + + + E R G + +++ I
Sbjct: 58 IAAADASYHASQTDLFGIQV-DRISVNGKAVXKRIQTERDRFVGFVVESVESFDEQDKIR 116
Query: 191 GRGKIVDPHTVDVDG-KLYSARHILISVGGRPFIPDI---PGSEYAIDSDAALDLPSKPE 246
G K +D HT+ VD A+ I+I+ G RP P+ GS + +D +L P+
Sbjct: 117 GFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRL-LTNDNLFELNDLPK 175
Query: 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTE 306
+A+ G G I LE S L V VF R V DE+ + + + + EF+ +
Sbjct: 176 SVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEXKRYAEKTFNE---EFYFD 232
Query: 307 ESPQAI--LKSTDGSLSV---KTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNG 361
+ I ++ D + K+ + T + F +V+ ATGR+ N LGLE +++ K
Sbjct: 233 AKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKN 292
Query: 362 AIEVDEYS-GTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPT--KPDYSAVPS 418
+ DE + T+V I+ GD + + L A + G +A T A P + A S
Sbjct: 293 SPLFDELTLQTSVDHIFVAGDANNTLTLLHEA-ADDGKVAGTNAGAYPVIAQGQRRAPLS 351
Query: 419 AVFSQPPIGQVGLSEEQAIQEYGDIDVFTANF 450
VF++P + VGLS Q Y D D AN+
Sbjct: 352 VVFTEPQVASVGLSLRQIEDLYADQD--AANY 381
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 197/438 (44%), Gaps = 40/438 (9%)
Query: 105 FSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY----GTEPQHDWS 160
++ + ++ G +GG C+ GCVP SK E ++ W+ + D+S
Sbjct: 28 YNVLMADPKGELGGNCLYSGCVP-------SKTVREVIQT---AWRLTNIANVKIPLDFS 77
Query: 161 TLIANKN-AELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DGKLYSA--RHIL 214
T+ K+ + R +N+ +T +G KI DP V V +GK A R+++
Sbjct: 78 TVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMI 137
Query: 215 ISVGGRPFIPDIPGSEYAIDSDAALDLPSK----PEKIAIVGGGYIALEFAGIFSGLTSE 270
I+ G +PG EY + SD + P+ + I+G GYI LE A IF + +
Sbjct: 138 IASGAETAKLRLPGVEYCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQ 197
Query: 271 VHVF-IRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTV 329
H+ + + ++ D+DI + + + L I+F++ + +K + + T G+
Sbjct: 198 THIIEMLDRALITLEDQDIVNTLLSILKL-NIKFNSPVTEVKKIKDDEYEVIYSTKDGSK 256
Query: 330 DGF--SHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRIN 387
+ V+ A GRRP G ++G+ ++K G I VDE T +P+++A GD
Sbjct: 257 KSIFTNSVVLAAGRRPVIPE-GAREIGLSISKTG-IVVDETMKTNIPNVFATGDANGLAP 314
Query: 388 LTPVALMEGGALAKTLFQAEPTKPDY---SAVPSAVFSQPPIGQVGLSEEQAIQEYGDID 444
A+ A A + A DY ++P +++ P + VG+ +A ++ G I+
Sbjct: 315 YYHAAVRMSIAAANNIM-ANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKA-RKMG-IE 371
Query: 445 VFTANF---RPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAG 501
+ A + + A + G + + +KL+ + +++G M G + ++ +AV G
Sbjct: 372 IVEAEYNMEEDVSAQIYGQKEGV-LKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYG 430
Query: 502 LTKADFDATVGVHPTAAE 519
L + HP+ E
Sbjct: 431 LNAKQLASFAEQHPSTNE 448
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 212/516 (41%), Gaps = 94/516 (18%)
Query: 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE-LPFSTISSETTGGVGGTCVLRGCVPKKL 130
++D IG G+ G S + G I + PF +GG+C CVP L
Sbjct: 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF----------LGGSCPHNACVPHHL 92
Query: 131 LVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYK----------NI 180
S + E + F +Y W + K ++ + +++ N
Sbjct: 93 F---SDCAAELMLARTFSGQY-------WFPDMTEKVVGIKEVVDLFRAGRNGPHGIMNF 142
Query: 181 LINAGITL---IEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPG-SEYAIDSD 236
+ L + K++D HTV+ GK++ A++++++VG P D+PG + +
Sbjct: 143 QSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAGPGTLDVPGVNAKGVFDH 202
Query: 237 AAL--DLPSKP-EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVA 293
A L +L +P + +VGG A+E+ F+ + +R + + D + R +V
Sbjct: 203 ATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVL 262
Query: 294 EQMSLRGIEF-------HTEESP----QAILKST-DGSLSVKTNKGTVDGFSHVMFATGR 341
++M +G+E EE QA++ T +G + ++T+ V G
Sbjct: 263 DRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETD--------FVFLGLGE 314
Query: 342 RPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEG---GA 398
+P + L + +G+ + G + V+EY T+VP+++AVGD+ P+ + + G
Sbjct: 315 QPRSAELA-KILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIG----GPMEMFKARKSGC 369
Query: 399 LAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLS 458
A E P + + + +G+ EE+A ++ T P T +
Sbjct: 370 YAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEA--RAAGHEIVTIKMPP--DTEN 425
Query: 459 GL------PDRI--------------FMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAV 498
GL DR F K+V+ AKT KVLG H G A + Q V +
Sbjct: 426 GLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLI 485
Query: 499 KAGLT---KADFDATVGVHPTAAEEFVTLRTPTRKI 531
K GLT D D ++PT + LR ++ +
Sbjct: 486 KQGLTVDELGDMDELF-LNPTHFIQLSRLRAGSKNL 520
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 139/325 (42%), Gaps = 32/325 (9%)
Query: 186 ITLIEGRGKIV-DPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYA--------IDSD 236
+T ++ KIV HT D +S +LI+ G RP +P+ G + D++
Sbjct: 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAE 175
Query: 237 AALDL--PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAE 294
L +K E + I+GGG I LE A F L +V + R + +D D+ +++ +
Sbjct: 176 RILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYK 235
Query: 295 QMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVG 354
+ IE T E+ +A K + +V+T+KGT V+ + G +PNT LE
Sbjct: 236 EADKHHIEILTNENVKA-FKGNERVEAVETDKGTYKA-DLVLVSVGVKPNTD--FLEGTN 291
Query: 355 VKMTKNGAIEVDEYSGTAVPSIWAVGD----------VTDRINLTPVALMEGGALAKTLF 404
++ GAIEV+ Y T V ++A GD + D I + A +G +
Sbjct: 292 IRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNML 351
Query: 405 QAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQ---EYGDIDVFTANFRPLKATLSGLP 461
F + + GL+E++A Y + V + N L
Sbjct: 352 DKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPL- 410
Query: 462 DRIFMKLVLCAKTNKVLGLHMCGED 486
++KL+ + T ++LG + GE+
Sbjct: 411 ---YLKLLYRSDTKQLLGGQVIGEE 432
>pdb|1F8W|A Chain A, Crystal Structure Of Nadh Peroxidase Mutant: R303m
Length = 447
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 160/366 (43%), Gaps = 57/366 (15%)
Query: 179 NILINAGITLIEGRG-KIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYAIDS-- 235
N+ N IT I+ + ++ V + ++ + ++IS G PF DIPG + +D+
Sbjct: 72 NVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD--LDNIY 129
Query: 236 -----DAALDLPSK---PE--KIAIVGGGYIALEFAGIFSGLTSEVHVF-IRQKKVLRGF 284
A+ L K PE + ++G GYI +E A F+ +V V I + +
Sbjct: 130 LMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYL 189
Query: 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRP 343
D++ D + E+M I T E+ + DG + V T+K D V+ A G RP
Sbjct: 190 DKEFTDVLTEEMEANNITIATGETVERY--EGDGRVQKVVTDKNAYDA-DLVVVAVGVRP 246
Query: 344 NTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT----------DRINLTPVAL 393
NT L K +++ NG I+ DEY T+ P ++AVGD T I L A+
Sbjct: 247 NTAWL---KGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNAM 303
Query: 394 MEGGALAKTLFQAEPTKPDYSAVPS----AVFSQPPIGQVGLSEEQAIQEYGD------- 442
+G K L EP KP + V AVF G++E A Q+ G
Sbjct: 304 KQGRFAVKNL--EEPVKP-FPGVQGSSGLAVFDY-KFASTGINEVMA-QKLGKETKAVTV 358
Query: 443 IDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLH-MCGEDAPEIVQGFAVAVKAG 501
++ + +F P K + + KLV +T ++LG M D + ++A++A
Sbjct: 359 VEDYLMDFNPDK-------QKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAK 411
Query: 502 LTKADF 507
+T D
Sbjct: 412 MTIEDL 417
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 186 ITLIEGRGKIV-DPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYA--------IDSD 236
+T ++ KIV HT D +S +LI+ G RP P+ G + D++
Sbjct: 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVXPEWEGRDLQGVHLLKTIPDAE 175
Query: 237 AALDL--PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAE 294
L +K E + I+GGG I LE A F L +V R + +D D +++ +
Sbjct: 176 RILKTLETNKVEDVTIIGGGAIGLEXAETFVELGKKVRXIERNDHIGTIYDGDXAEYIYK 235
Query: 295 QMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVG 354
+ IE T E+ +A K + +V+T+KGT V+ + G +PNT LE
Sbjct: 236 EADKHHIEILTNENVKA-FKGNERVEAVETDKGTYKA-DLVLVSVGVKPNTD--FLEGTN 291
Query: 355 VKMTKNGAIEVDEYSGTAVPSIWAVGD 381
++ GAIEV+ Y T V ++A GD
Sbjct: 292 IRTNHKGAIEVNAYXQTNVQDVYAAGD 318
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 57/366 (15%)
Query: 179 NILINAGITLIEGRG-KIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYAIDS-- 235
N+ N IT I+ + ++ V + ++ + ++IS G PF DIPG + +D+
Sbjct: 72 NVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD--LDNIY 129
Query: 236 -----DAALDLPSK---PE--KIAIVGGGYIALEFAGIFSGLTSEVHVF-IRQKKVLRGF 284
A+ L K PE + ++G GYI +E A F+ +V V I + +
Sbjct: 130 LMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYL 189
Query: 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRP 343
D++ D + E+M I T E+ + DG + V T+K D V+ A G RP
Sbjct: 190 DKEFTDVLTEEMEANNITIATGETVERY--EGDGRVQKVVTDKNAYDA-DLVVVAVGVRP 246
Query: 344 NTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT----------DRINLTPVAL 393
NT L K +++ NG I+ DEY T+ P ++AVGD T I L A
Sbjct: 247 NTAWL---KGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNAR 303
Query: 394 MEGGALAKTLFQAEPTKPDYSAVPS----AVFSQPPIGQVGLSEEQAIQEYGD------- 442
+G K L EP KP + V AVF G++E A Q+ G
Sbjct: 304 KQGRFAVKNL--EEPVKP-FPGVQGSSGLAVFDY-KFASTGINEVMA-QKLGKETKAVTV 358
Query: 443 IDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLH-MCGEDAPEIVQGFAVAVKAG 501
++ + +F P K + + KLV +T ++LG M D + ++A++A
Sbjct: 359 VEDYLMDFNPDK-------QKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAK 411
Query: 502 LTKADF 507
+T D
Sbjct: 412 MTIEDL 417
>pdb|1NHQ|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 57/366 (15%)
Query: 179 NILINAGITLIEGRG-KIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYAIDS-- 235
N+ N IT I+ + ++ V + ++ + ++IS G PF DIPG + +D+
Sbjct: 72 NVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD--LDNIY 129
Query: 236 -----DAALDLPSK---PE--KIAIVGGGYIALEFAGIFSGLTSEVHVF-IRQKKVLRGF 284
A+ L K PE + ++G GYI +E A F+ +V V I + +
Sbjct: 130 LMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYL 189
Query: 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRP 343
D++ D + E+M I T E+ + DG + V T+K D V+ A G RP
Sbjct: 190 DKEFTDVLTEEMEANNITIATGETVERY--EGDGRVQKVVTDKNAYDA-DLVVVAVGVRP 246
Query: 344 NTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT----------DRINLTPVAL 393
NT L K +++ NG I+ DEY T+ P ++AVGD T I L A
Sbjct: 247 NTAWL---KGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNAR 303
Query: 394 MEGGALAKTLFQAEPTKPDYSAVPS----AVFSQPPIGQVGLSEEQAIQEYGD------- 442
+G K L EP KP + V AVF G++E A Q+ G
Sbjct: 304 KQGRFAVKNL--EEPVKP-FPGVQGSSGLAVFDY-KFASTGINEVMA-QKLGKETKAVTV 358
Query: 443 IDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLH-MCGEDAPEIVQGFAVAVKAG 501
++ + +F P K + + KLV +T ++LG M D + ++A++A
Sbjct: 359 VEDYLMDFNPDK-------QKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAK 411
Query: 502 LTKADF 507
+T D
Sbjct: 412 MTIEDL 417
>pdb|1NHP|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 57/366 (15%)
Query: 179 NILINAGITLIEGRG-KIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYAIDS-- 235
N+ N IT I+ + ++ V + ++ + ++IS G PF DIPG + +D+
Sbjct: 72 NVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD--LDNIY 129
Query: 236 -----DAALDLPSK---PE--KIAIVGGGYIALEFAGIFSGLTSEVHVF-IRQKKVLRGF 284
A+ L K PE + ++G GYI +E A F+ +V V I + +
Sbjct: 130 LMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYL 189
Query: 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRP 343
D++ D + E+M I T E+ + DG + V T+K D V+ A G RP
Sbjct: 190 DKEFTDVLTEEMEANNITIATGETVERY--EGDGRVQKVVTDKNAYDA-DLVVVAVGVRP 246
Query: 344 NTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT----------DRINLTPVAL 393
NT L K +++ NG I+ DEY T+ P ++AVGD T I L A
Sbjct: 247 NTAWL---KGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNAR 303
Query: 394 MEGGALAKTLFQAEPTKPDYSAVPS----AVFSQPPIGQVGLSEEQAIQEYGD------- 442
+G K L EP KP + V AVF G++E A Q+ G
Sbjct: 304 KQGRFAVKNL--EEPVKP-FPGVQGSSGLAVFDY-KFASTGINEVMA-QKLGKETKAVTV 358
Query: 443 IDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLH-MCGEDAPEIVQGFAVAVKAG 501
++ + +F P K + + KLV +T ++LG M D + ++A++A
Sbjct: 359 VEDYLMDFNPDK-------QKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAK 411
Query: 502 LTKADF 507
+T D
Sbjct: 412 MTIEDL 417
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 57/366 (15%)
Query: 179 NILINAGITLIEGRG-KIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYAIDS-- 235
N+ N IT I+ + ++ V + ++ + ++IS G PF DIPG + +D+
Sbjct: 72 NVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD--LDNIY 129
Query: 236 -----DAALDLPSK---PE--KIAIVGGGYIALEFAGIFSGLTSEVHVF-IRQKKVLRGF 284
A+ L K PE + ++G GYI +E A F+ +V V I + +
Sbjct: 130 LMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYL 189
Query: 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRP 343
D++ D + E+M I T E+ + DG + V T+K D V+ A G RP
Sbjct: 190 DKEFTDVLTEEMEANNITIATGETVERY--EGDGRVQKVVTDKNAYDA-DLVVVAVGVRP 246
Query: 344 NTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT----------DRINLTPVAL 393
NT L K +++ NG I+ DEY T+ P ++AVGD T I L A
Sbjct: 247 NTAWL---KGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNAR 303
Query: 394 MEGGALAKTLFQAEPTKPDYSAVPS----AVFSQPPIGQVGLSEEQAIQEYGD------- 442
+G K L EP KP + V AVF G++E A Q+ G
Sbjct: 304 KQGRFAVKNL--EEPVKP-FPGVQGSSGLAVFDY-KFASTGINEVMA-QKLGKETKAVTV 358
Query: 443 IDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLH-MCGEDAPEIVQGFAVAVKAG 501
++ + +F P K + + KLV +T ++LG M D + ++A++A
Sbjct: 359 VEDYLMDFNPDK-------QKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAK 411
Query: 502 LTKADF 507
+T D
Sbjct: 412 MTIEDL 417
>pdb|1JOA|A Chain A, Nadh Peroxidase With Cysteine-Sulfenic Acid
pdb|1NPX|A Chain A, Structure Of Nadh Peroxidase From Streptococcus Faecalis
10c1 Refined At 2.16 Angstroms Resolution
pdb|2NPX|A Chain A, Nadh Binding Site And Catalysis Of Nadh Peroxidase
Length = 447
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 57/366 (15%)
Query: 179 NILINAGITLIEGRG-KIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSEYAIDS-- 235
N+ N IT I+ + ++ V + ++ + ++IS G PF DIPG + +D+
Sbjct: 72 NVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD--LDNIY 129
Query: 236 -----DAALDLPSK---PE--KIAIVGGGYIALEFAGIFSGLTSEVHVF-IRQKKVLRGF 284
A+ L K PE + ++G GYI +E A F+ +V V I + +
Sbjct: 130 LMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYL 189
Query: 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRP 343
D++ D + E+M I T E+ + DG + V T+K D V+ A G RP
Sbjct: 190 DKEFTDVLTEEMEANNITIATGETVERY--EGDGRVQKVVTDKNAYDA-DLVVVAVGVRP 246
Query: 344 NTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT----------DRINLTPVAL 393
NT L K +++ NG I+ DEY T+ P ++AVGD T I L A
Sbjct: 247 NTAWL---KGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNAR 303
Query: 394 MEGGALAKTLFQAEPTKPDYSAVPS----AVFSQPPIGQVGLSEEQAIQEYGD------- 442
+G K L EP KP + V AVF G++E A Q+ G
Sbjct: 304 KQGRFAVKNL--EEPVKP-FPGVQGSSGLAVFDY-KFASTGINEVMA-QKLGKETKAVTV 358
Query: 443 IDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLH-MCGEDAPEIVQGFAVAVKAG 501
++ + +F P K + + KLV +T ++LG M D + ++A++A
Sbjct: 359 VEDYLMDFNPDK-------QKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAK 411
Query: 502 LTKADF 507
+T D
Sbjct: 412 MTIEDL 417
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
Length = 490
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 146/339 (43%), Gaps = 46/339 (13%)
Query: 203 VDGKLYSARH--ILISVGGRPFIPDIPGSE--------------------YAIDSDAALD 240
VDGK + + ++ + G +P +P I G+E Y +D
Sbjct: 129 VDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAK 188
Query: 241 LPSKP-EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF-DEDIRDFVAEQMSL 298
L +K +++A+VG GYI +E A F EV + L G+ D D+ D +A+ M
Sbjct: 189 LENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEE 248
Query: 299 RGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GI+ E+ + + + +G + + T+K D V+ A G RPNT LG K+ +
Sbjct: 249 HGIQLAFGETVKEV--AGNGKVEKIITDKNEYD-VDMVILAVGFRPNT-TLGNGKI--DL 302
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDV----------TDRINLTPVALMEGGALAKTLFQAE 407
+NGA V++ T++P ++A+GD T+ I L A+ G A +
Sbjct: 303 FRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362
Query: 408 PTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV--FTANFRPLKATLSGLPDRIF 465
+ GL+ E+A + D V +T N +P P +
Sbjct: 363 LEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFP--VT 420
Query: 466 MKLVLCAKTNKVLGLHMCG-EDAPEIVQGFAVAVKAGLT 503
+K+V + ++LG M ED + F++A++ G+T
Sbjct: 421 IKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVT 459
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
Length = 490
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 146/339 (43%), Gaps = 46/339 (13%)
Query: 203 VDGKLYSARH--ILISVGGRPFIPDIPGSE--------------------YAIDSDAALD 240
VDGK + + ++ + G +P +P I G+E Y +D
Sbjct: 129 VDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAK 188
Query: 241 LPSKP-EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF-DEDIRDFVAEQMSL 298
L +K +++A+VG GYI +E A F EV + L G+ D D+ D +A+ M
Sbjct: 189 LENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEE 248
Query: 299 RGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM 357
GI+ E+ + + + +G + + T+K D V+ A G RPNT LG K+ +
Sbjct: 249 HGIQLAFGETVKEV--AGNGKVEKIITDKNEYD-VDMVILAVGFRPNT-TLGNGKI--DL 302
Query: 358 TKNGAIEVDEYSGTAVPSIWAVGDV----------TDRINLTPVALMEGGALAKTLFQAE 407
+NGA V++ T++P ++A+GD T+ I L A+ G A +
Sbjct: 303 FRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362
Query: 408 PTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV--FTANFRPLKATLSGLPDRIF 465
+ GL+ E+A + D V +T N +P P +
Sbjct: 363 LEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFP--VT 420
Query: 466 MKLVLCAKTNKVLGLHMCG-EDAPEIVQGFAVAVKAGLT 503
+K+V + ++LG M ED + F++A++ G+T
Sbjct: 421 IKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVT 459
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 144/331 (43%), Gaps = 45/331 (13%)
Query: 206 KLYSARHILISVGGRPFIPDIPGSEYAIDSDAALDLPS------------KPEKIAIVGG 253
K Y +++ + G P +P I G + DLP K E + I+GG
Sbjct: 99 KSYEWDYLVFANGASPQVPAIEGVN--LKGVFTADLPPDALAIREYMEKYKVENVVIIGG 156
Query: 254 GYIALEFAGIFSGLTSEVHVFIRQKKVL-RGFDEDIRDFVAEQMSLRGIEFHTEESPQAI 312
GYI +E A F+ V + +R ++VL R FD+++ D + E++ H Q I
Sbjct: 157 GYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKK-----HVNLRLQEI 211
Query: 313 LKSTDGSLSVK---TNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYS 369
+G V+ T+ G V+ ATG +PN + +++GV++ + GAI +E
Sbjct: 212 TMKIEGEERVEKVVTDAGEYKA-ELVILATGIKPNIEL--AKQLGVRIGETGAIWTNEKM 268
Query: 370 GTAVPSIWAVGDVTD----------RINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSA 419
T+V +++A GDV + + L P G + E P
Sbjct: 269 QTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVT 328
Query: 420 VFSQPPIGQVGLSEEQAIQEYGDIDV--FTANFRPLKATLSGLP--DRIFMKLVLCAKTN 475
F IG+ GL+E +A++E D+ A+ RP P I++K V+ +TN
Sbjct: 329 KFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRP-----HYYPGGREIWLKGVVDNETN 383
Query: 476 KVLGLHMCGEDAPEIVQGFAVAVKAGLTKAD 506
++LG+ + G D + A + AG T D
Sbjct: 384 RLLGVQVVGSDILPRIDTAAAMLMAGFTTKD 414
>pdb|2CDU|A Chain A, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
pdb|2CDU|B Chain B, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
Length = 452
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 213 ILISVGGRPFIPDIPGSEYA--------IDSDAALDLPSKPEKIAIVGGGYIALEFAGIF 264
++++ G +P +P IPG + + D+ + K + I I+G GYI E A +
Sbjct: 109 LIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAY 168
Query: 265 SGLTSEVHVFIRQKKVL-RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVK 323
S V++ ++VL + FD++ D +A+ G+ S A + D + K
Sbjct: 169 SNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNL-VLGSKVAAFEEVDDEIITK 227
Query: 324 TNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGD 381
T G + G RPNT+ L K V M NGAI DEY ++ I+A GD
Sbjct: 228 TLDGKEIKSDIAILCIGFRPNTE---LLKGKVAMLDNGAIITDEYMHSSNRDIFAAGD 282
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 243 SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIE 302
++ +K+ +VG GY++LE + R K+ + D D+ + +++ R I
Sbjct: 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIP 204
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
+ E AI ++ K+ G V+ + ++ G PN+K +E +K+ + G
Sbjct: 205 YRLNEEINAI---NGNEITFKS--GKVEHYDMIIEGVGTHPNSK--FIESSNIKLDRKGF 257
Query: 363 IEVDEYSGTAVPSIWAVGDV 382
I V++ T VP+I+A+GD+
Sbjct: 258 IPVNDKFETNVPNIYAIGDI 277
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 243 SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIE 302
++ +K+ +VG GY++LE + R K+ + D D+ + +++ R I
Sbjct: 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIP 204
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
+ E AI ++ K+ G V+ + ++ G PN+K +E +K+ + G
Sbjct: 205 YRLNEEINAI---NGNEITFKS--GKVEHYDMIIEGVGTHPNSK--FIESSNIKLDRKGF 257
Query: 363 IEVDEYSGTAVPSIWAVGDV 382
I V++ T VP+I+A+GD+
Sbjct: 258 IPVNDKFETNVPNIYAIGDI 277
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 243 SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIE 302
++ +K+ +VG GY++LE + R K+ + D D+ + +++ R I
Sbjct: 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIP 204
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
+ E AI ++ K+ G V+ + ++ G PN+K +E +K+ + G
Sbjct: 205 YRLNEEINAI---NGNEITFKS--GKVEHYDMIIEGVGTHPNSK--FIESSNIKLDRKGF 257
Query: 363 IEVDEYSGTAVPSIWAVGDV 382
I V++ T VP+I+A+GD+
Sbjct: 258 IPVNDKFETNVPNIYAIGDI 277
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 243 SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIE 302
++ +K+ +VG GY++LE + R K+ + D D+ + +++ R I
Sbjct: 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIP 204
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
+ E AI ++ K+ G V+ + ++ G PN+K +E +K+ + G
Sbjct: 205 YRLNEEINAI---NGNEITFKS--GKVEHYDMIIEGVGTHPNSK--FIESSNIKLDRKGF 257
Query: 363 IEVDEYSGTAVPSIWAVGDV 382
I V++ T VP+I+A+GD+
Sbjct: 258 IPVNDKFETNVPNIYAIGDI 277
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 243 SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIE 302
++ +K+ +VG GY++LE + R K+ + D D+ + +++ R I
Sbjct: 146 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIP 205
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
+ E AI ++ K+ G V+ + ++ G PN+K +E +K+ + G
Sbjct: 206 YRLNEEINAI---NGNEITFKS--GKVEHYDMIIEGVGTHPNSK--FIESSNIKLDRKGF 258
Query: 363 IEVDEYSGTAVPSIWAVGDV 382
I V++ T VP+I+A+GD+
Sbjct: 259 IPVNDKFETNVPNIYAIGDI 278
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 243 SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIE 302
++ +K+ +VG GY++LE + R K+ + D D+ + +++ R I
Sbjct: 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIP 204
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
+ E AI ++ K+ G V+ + ++ G PN+K +E +K+ + G
Sbjct: 205 YRLNEEINAI---NGNEITFKS--GKVEHYDMIIEGVGTHPNSK--FIESSNIKLDRKGF 257
Query: 363 IEVDEYSGTAVPSIWAVGDV 382
I V++ T VP+I+A+GD+
Sbjct: 258 IPVNDKFETNVPNIYAIGDI 277
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHT 305
+K+ +VG GY++LE + R K+ + D D+ + +++ R I +
Sbjct: 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRL 207
Query: 306 EESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEV 365
E AI ++ K+ G V+ + ++ G PN+K +E +K+ + G I V
Sbjct: 208 NEEINAI---NGNEITFKS--GKVEHYDMIIEGVGTHPNSK--FIESSNIKLDRKGFIPV 260
Query: 366 DEYSGTAVPSIWAVGDV 382
++ T VP+I+A+GD+
Sbjct: 261 NDKFETNVPNIYAIGDI 277
>pdb|2GR3|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
Length = 408
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 197 DP--HTVDV-DGKLYSARHILISVGGRP-FIPDIPGSEYAIDSDAALDLPSKPE------ 246
DP HTV + DG+ ++++ G P +P + G+ + + L+ + +
Sbjct: 86 DPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQ 145
Query: 247 -KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK---VLRGFDEDIRDFVAEQMSLRGIE 302
++ IVGGG I LE A + T+ VHV + + + + R + DFVA + +G++
Sbjct: 146 SRLLIVGGGVIGLELAA--TARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVD 203
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
E S + S DG V + GT V+ G N L + +G
Sbjct: 204 LRFERS---VTGSVDGV--VLLDDGTRIAADMVVVGIG---VLANDALARAAGLACDDG- 254
Query: 363 IEVDEYSGTAVPSIWAVGDVT----------DRINLTPVALMEGGALAKTLFQAEPTKPD 412
I VD Y T P ++A+GDVT +RI A +G A+A+ L +PT P
Sbjct: 255 IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLV--DPTAPG 312
Query: 413 YSAVP 417
Y+ +P
Sbjct: 313 YAELP 317
>pdb|1D7Y|A Chain A, Crystal Structure Of Nadh-Dependent Ferredoxin Reductase,
Bpha4
pdb|1F3P|A Chain A, Ferredoxin Reductase (Bpha4)-Nadh Complex
pdb|2GQW|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2GR0|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (oxidized
Form, Nad+ Complex)
pdb|2GR1|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Hydroquinone)
pdb|2GR2|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2YVF|A Chain A, Crystal Structure Of Ferredoxin Reductase Bpha4
(Hydroquinone)
pdb|2YVG|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Blue-Semiquinone)
pdb|2YVJ|A Chain A, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
pdb|2YVJ|P Chain P, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
Length = 408
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 197 DP--HTVDV-DGKLYSARHILISVGGRP-FIPDIPGSEYAIDSDAALDLPSKPE------ 246
DP HTV + DG+ ++++ G P +P + G+ + + L+ + +
Sbjct: 86 DPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQ 145
Query: 247 -KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK---VLRGFDEDIRDFVAEQMSLRGIE 302
++ IVGGG I LE A + T+ VHV + + + + R + DFVA + +G++
Sbjct: 146 SRLLIVGGGVIGLELAA--TARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVD 203
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
E S + S DG V + GT V+ G N L + +G
Sbjct: 204 LRFERS---VTGSVDGV--VLLDDGTRIAADMVVVGIG---VLANDALARAAGLACDDG- 254
Query: 363 IEVDEYSGTAVPSIWAVGDVT----------DRINLTPVALMEGGALAKTLFQAEPTKPD 412
I VD Y T P ++A+GDVT +RI A +G A+A+ L +PT P
Sbjct: 255 IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLV--DPTAPG 312
Query: 413 YSAVP 417
Y+ +P
Sbjct: 313 YAELP 317
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
Length = 452
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 204 DGKLYSARHILISVGGRPFIPDIPGSE--------YAIDSDAALDLPSKPEKIAIVGGGY 255
+ + YS ++++ G F I GS+ + + AA+ L + +A++G G
Sbjct: 98 EQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGP 157
Query: 256 IALEFAGIFSGLTSEVHVFIRQKKVL-RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILK 314
I E VHVF + +L + FD++ V + + + + FH EE+ I +
Sbjct: 158 IGXEAIDFLVKXKKTVHVFESLENLLPKYFDKEXVAEVQKSLEKQAVIFHFEETVLGIEE 217
Query: 315 STDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVP 374
+ +G + ++T++ + S + FA P L + ++ + I VD Y T+VP
Sbjct: 218 TANG-IVLETSEQEISCDSGI-FALNLHPQLAYLDKK---IQRNLDQTIAVDAYLQTSVP 272
Query: 375 SIWAVGDVTDRINLTPVA 392
+++A+GD N PVA
Sbjct: 273 NVFAIGDCISVXN-EPVA 289
>pdb|3IWA|A Chain A, Crystal Structure Of A Fad-Dependent Pyridine
Nucleotide-Disulphide Oxidoreductase From Desulfovibrio
Vulgaris
Length = 472
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 46/330 (13%)
Query: 188 LIEGRGKIVD--PHTVDVDGKLYSARHIL------ISVGGRPFIPDIPGSEYA-IDSDAA 238
L+E R +D HTV+++ R L +++G + P + G + A +
Sbjct: 84 LVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTN 143
Query: 239 LDLPS---------KPEKIAIVGGGYIALEFAGIFSGLTS-EVHVFIRQKKVLRGF-DED 287
LD + K IVGGG+I LE A + + + V +++ GF +
Sbjct: 144 LDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKS 203
Query: 288 IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347
+ + + + HT E + V T+K T+D V+ A G PNT+
Sbjct: 204 LSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDA-DLVILAAGVSPNTQL 262
Query: 348 LGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGD-------VTDRINLTPVALM---EGG 397
G+++ GAI VD T+ P I+A GD VT + P+ M +G
Sbjct: 263 A--RDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGR 320
Query: 398 ALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQE-YGDIDVFT-----ANFR 451
+ L + T P + + GL+ E A++E Y ++V A+F
Sbjct: 321 VIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHFY 380
Query: 452 PLKATLSGLPDRIFMKLVLCAKTNKVLGLH 481
P K ++ ++LV+ T +VLG+
Sbjct: 381 PEKTIMT-------LQLVVDRPTRRVLGIQ 403
>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
Length = 588
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 213 ILISVGGRPFIPDIPGSEYAI---------DSD---AALDLPSKPEKIAIVGGGYIALEF 260
+++S G +P +P IPG E A D+D A +D KP ++GGG+I +E
Sbjct: 144 LILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYID-EKKPRHATVIGGGFIGVEX 202
Query: 261 AGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSL 320
EV + +V D + +V E +E E+ A+ +G++
Sbjct: 203 VENLRERGIEVTLVEXANQVXPPIDYEXAAYVHEHXKNHDVELVFEDGVDAL--EENGAV 260
Query: 321 SVKTNKGTVDGFSHVMFATGRRPNTKNLGLEK-VGVKMTKNGAIEVDEYSGTAVPSIWAV 379
V+ G+V ++ A G +P + L K G+ + G I+V+E T+ P I+A+
Sbjct: 261 -VRLKSGSVIQTDXLILAIGVQPES---SLAKGAGLALGVRGTIKVNEKFQTSDPHIYAI 316
Query: 380 GD 381
GD
Sbjct: 317 GD 318
>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
Length = 565
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 136/345 (39%), Gaps = 50/345 (14%)
Query: 203 VDGKLYSARH--ILISVGGRPFIPDIPGSEYAI--------DSDAALDL--PSKPEKIAI 250
+DG Y + +L+S G P +P IPG + + D D L + E +
Sbjct: 97 LDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATV 156
Query: 251 VGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFH-----T 305
VGGG+I LE L + + +V+ D ++ F + + +G++ +
Sbjct: 157 VGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALS 216
Query: 306 EESPQA-------------ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEK 352
E S Q + G LS+ + G + ++ A G RP T+
Sbjct: 217 EVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLA--RD 274
Query: 353 VGVKMTKNGAIEVDEYSGTAVPSIWAVGD-------VTDRINLTPV---ALMEGGALAKT 402
G+ + + G I+V+ T+ P+I+AVGD VT + L P+ A +G A
Sbjct: 275 AGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADN 334
Query: 403 LFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQ---EYGDIDVFTANFRPLKATLSG 459
+F E +G G +E+Q Q + + V TA+ A+
Sbjct: 335 MFGREERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYVHTAS----HASYYP 390
Query: 460 LPDRIFMKLVLCAKTNKVLGLHMCGEDA-PEIVQGFAVAVKAGLT 503
+ + KL+ + G G+D + + AVA +AG+T
Sbjct: 391 GAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMT 435
>pdb|1F6M|A Chain A, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|B Chain B, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|E Chain E, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|F Chain F, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 198 PHTVDVDGKLYSARHILISVGGRPFIPDIPGSE----YAIDSDAALD-LPSKPEKIAIVG 252
P ++ D Y+ ++I+ G +P E + + A D + +K+A++G
Sbjct: 93 PFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSASATCDGFFYRNQKVAVIG 152
Query: 253 GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF--DEDIRDFVAEQMSLRGIEFHTEESPQ 310
GG A+E A S + SEVH+ R+ GF ++ + + +++ I HT + +
Sbjct: 153 GGNTAVEEALYLSNIASEVHLIHRRD----GFRAEKILIKRLMDKVENGNIILHTNRTLE 208
Query: 311 AILKSTDGSLSVK----TNKGTVDGF--SHVMFATGRRPNTKNLGLEKVGVKMTKNGAIE 364
+ G V+ N ++ + + A G PNT G +NG I+
Sbjct: 209 EVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF----EGQLELENGYIK 264
Query: 365 VD-----EYSGTAVPSIWAVGDVTDRI 386
V + T++P ++A GDV D I
Sbjct: 265 VQSGIHGNATQTSIPGVFAAGDVMDHI 291
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 17/205 (8%)
Query: 196 VDP--HTVDV-DGKLYSARHILISVGGRPFIPDIPGSEYA--------IDSDAAL-DLPS 243
+DP HTV + DG ++ + GG P G++ A D+D + +L +
Sbjct: 91 LDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDA 150
Query: 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL-RGFDEDIRDFVAEQMSLRGIE 302
+ ++GGGYI LE A + + V + +VL R E + +F + G++
Sbjct: 151 GAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVD 210
Query: 303 FHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGA 362
T + I V+ G+V V+ G P L + +
Sbjct: 211 LRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGAL----ISAGASGGNG 266
Query: 363 IEVDEYSGTAVPSIWAVGDVTDRIN 387
++VDE+ T++ ++A+GD N
Sbjct: 267 VDVDEFCRTSLTDVYAIGDCAAHAN 291
>pdb|3NTA|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
pdb|3NTA|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
Length = 574
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 39/227 (17%)
Query: 203 VDGKLYSARH--ILISVGGRPFIPDIPGSEYAI--------DSDAALDL--PSKPEKIAI 250
+DG Y + +L+S G P +P IPG + + D D L + E +
Sbjct: 97 LDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEHATV 156
Query: 251 VGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFH-----T 305
VGGG+I LE L + + +V D + F + + +G++ +
Sbjct: 157 VGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGTALS 216
Query: 306 EESPQA-------------ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEK 352
E S Q + G LS+ + G + ++ A G RP T+
Sbjct: 217 EVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLA--RD 274
Query: 353 VGVKMTKNGAIEVDEYSGTAVPSIWAVGD-------VTDRINLTPVA 392
G+ + + G I+V+ T+ P+I+AVGD VT + L P+A
Sbjct: 275 AGLAIGELGGIKVNAXXQTSDPAIYAVGDAVEEQDFVTGQACLVPLA 321
>pdb|1TDE|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin
Reductase Refined At 2 Angstrom Resolution: Implications
For A Large Conformational Change During Catalysis
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 198 PHTVDVDGKLYSARHILISVGGRPFIPDIPGSE----YAIDSDAALD-LPSKPEKIAIVG 252
P ++ D Y+ ++I+ G +P E + + A D + +K+A++G
Sbjct: 93 PFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIG 152
Query: 253 GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF--DEDIRDFVAEQMSLRGIEFHTEESPQ 310
GG A+E A S + SEVH+ R+ GF ++ + + +++ I HT + +
Sbjct: 153 GGNTAVEEALYLSNIASEVHLIHRRD----GFRAEKILIKRLMDKVENGNIILHTNRTLE 208
Query: 311 AILKSTDGSLSVK----TNKGTVDGF--SHVMFATGRRPNTKNLGLEKVGVKMTKNGAIE 364
+ G V+ N ++ + + A G PNT G +NG I+
Sbjct: 209 EVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF----EGQLELENGYIK 264
Query: 365 VD-----EYSGTAVPSIWAVGDVTDRI 386
V + T++P ++A GDV D I
Sbjct: 265 VQSGIHGNATQTSIPGVFAAGDVMDHI 291
>pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxin Reductase From
Escherichia Coli
Length = 320
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 198 PHTVDVDGKLYSARHILISVGGRPFIPDIPGSE----YAIDSDAALD-LPSKPEKIAIVG 252
P ++ D Y+ ++I+ G +P E + + A D + +K+A++G
Sbjct: 93 PFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIG 152
Query: 253 GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF--DEDIRDFVAEQMSLRGIEFHTEESPQ 310
GG A+E A S + SEVH+ R+ GF ++ + + +++ I HT + +
Sbjct: 153 GGNTAVEEALYLSNIASEVHLIHRRD----GFRAEKILIKRLMDKVENGNIILHTNRTLE 208
Query: 311 AILKSTDGSLSVK----TNKGTVDGF--SHVMFATGRRPNTKNLGLEKVGVKMTKNGAIE 364
+ G V+ N ++ + + A G PNT G +NG I+
Sbjct: 209 EVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF----EGQLELENGYIK 264
Query: 365 VD-----EYSGTAVPSIWAVGDVTDRI 386
V + T++P ++A GDV D I
Sbjct: 265 VQSGIHGNATQTSIPGVFAAGDVMDHI 291
>pdb|3NT6|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
pdb|3NT6|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
Length = 574
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 39/227 (17%)
Query: 203 VDGKLYSARH--ILISVGGRPFIPDIPGSEYAI--------DSDAALDL--PSKPEKIAI 250
+DG Y + +L+S G P +P IPG + + D D L + E +
Sbjct: 97 LDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEHATV 156
Query: 251 VGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFH-----T 305
VGGG+I LE L + + +V D + F + + +G++ +
Sbjct: 157 VGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGTALS 216
Query: 306 EESPQA-------------ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEK 352
E S Q + G LS+ + G + ++ A G RP T+
Sbjct: 217 EVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLA--RD 274
Query: 353 VGVKMTKNGAIEVDEYSGTAVPSIWAVGD-------VTDRINLTPVA 392
G+ + + G I+V+ T+ P+I+AVGD VT + L P+A
Sbjct: 275 AGLAIGELGGIKVNAXXQTSDPAIYAVGDAVEEQDFVTGQACLVPLA 321
>pdb|1TDF|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin
Reductase Refined At 2 Angstrom Resolution: Implications
For A Large Conformational Change During Catalysis
Length = 316
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 198 PHTVDVDGKLYSARHILISVGGRPFIPDIPGSE----YAIDSDAALD-LPSKPEKIAIVG 252
P ++ D Y+ ++I+ G +P E + + A D + +K+A++G
Sbjct: 93 PFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIG 152
Query: 253 GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF--DEDIRDFVAEQMSLRGIEFHTEESPQ 310
GG A+E A S + SEVH+ R+ GF ++ + + +++ I HT + +
Sbjct: 153 GGNTAVEEALYLSNIASEVHLIHRRD----GFRAEKILIKRLMDKVENGNIILHTNRTLE 208
Query: 311 AILKSTDGSLSVK----TNKGTVDGF--SHVMFATGRRPNTKNLGLEKVGVKMTKNGAIE 364
+ G V+ N ++ + + A G PNT G +NG I+
Sbjct: 209 EVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF----EGQLELENGYIK 264
Query: 365 VD-----EYSGTAVPSIWAVGDVTDRI 386
V + T++P ++A GDV D I
Sbjct: 265 VQSGIHGNATQTSIPGVFAAGDVMDHI 291
>pdb|1TRB|A Chain A, Convergent Evolution Of Similar Function In Two
Structurally Divergent Enzymes
Length = 320
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 198 PHTVDVDGKLYSARHILISVGGRPFIPDIPGSE----YAIDSDAALD-LPSKPEKIAIVG 252
P ++ D Y+ ++I+ G +P E + + A D + +K+A++G
Sbjct: 93 PFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIG 152
Query: 253 GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF--DEDIRDFVAEQMSLRGIEFHTEESPQ 310
GG A+E A S + SEVH+ R+ GF ++ + + +++ I HT + +
Sbjct: 153 GGNTAVEEALYLSNIASEVHLIHRRD----GFRAEKILIKRLMDKVENGNIILHTNRTLE 208
Query: 311 AILKSTDGSLSVK----TNKGTVDGF--SHVMFATGRRPNTKNLGLEKVGVKMTKNGAIE 364
+ G V+ N ++ + + A G PNT G +NG I+
Sbjct: 209 EVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF----EGQLELENGYIK 264
Query: 365 VD-----EYSGTAVPSIWAVGDVTDRI 386
V + T++P ++A GDV D I
Sbjct: 265 VQSGIHGNATQTSIPGVFAAGDVMDHI 291
>pdb|2Q7V|A Chain A, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
pdb|2Q7V|B Chain B, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
Length = 325
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 9/194 (4%)
Query: 198 PHTVDVDGKLYSARHILISVGGRPFIPDIPGSE----YAIDSDAALD-LPSKPEKIAIVG 252
P TV Y A+ ++++ G P IPG + + + A D K +K+ ++G
Sbjct: 100 PFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIG 159
Query: 253 GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAI 312
GG A+E + EV V R+ + R F +M + EE A
Sbjct: 160 GGDAAVEEGMFLTKFADEVTVIHRRDTLRANKVAQARAFANPKMKFI-WDTAVEEIQGAD 218
Query: 313 LKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTA 372
S ++KT + + V G PNT + K V + +G ++V + T
Sbjct: 219 SVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFV---KDTVSLRDDGYVDVRDEIYTN 275
Query: 373 VPSIWAVGDVTDRI 386
+P ++A GDV+D I
Sbjct: 276 IPMLFAAGDVSDYI 289
>pdb|4FDC|B Chain B, Crystal Structure Of The E493v Mutant Of Human Apoptosis
Inducing Factor (Aif)
Length = 514
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 48/232 (20%)
Query: 183 NAGITLIEGRGKIVDPHTVDV-----DGKLYSARHILISVGGRPF---IPDIPGSEYA-- 232
N G+ ++ G+ K+V D DG + LI+ GG P D G+E
Sbjct: 120 NGGVAVLTGK-KVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSR 178
Query: 233 ------IDSDAALDLPSKPEK-IAIVGGGYIALEFAGIF----SGLTSEV-HVFIRQKKV 280
I +L+ S+ K I I+GGG++ E A L +EV +F + +
Sbjct: 179 TTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM 238
Query: 281 LRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKS---TDGSLSVKTNKGTVDGFSHVMF 337
+ E + ++ E++ G++ P AI++S + G L +K G H++
Sbjct: 239 GKILPEYLSNWTMEKVRREGVKVM----PNAIVQSVGVSSGKLLIKLKDGRKVETDHIVA 294
Query: 338 ATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG--------TAVPSIWAVGD 381
A G PN V++ K G +E+D G A +IW GD
Sbjct: 295 AVGLEPN----------VELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGD 336
>pdb|2A87|A Chain A, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
pdb|2A87|B Chain B, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
Length = 335
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 201 VDVDGKLYSARHILISVGGRPFIPDIPGSE----YAIDSDAALD-LPSKPEKIAIVGGGY 255
V DG+ + AR +++++G +PG + + S A D + + IA++GGG
Sbjct: 106 VTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGD 165
Query: 256 IALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKS 315
A+E A + V + ++ R + + D +R + HT + +
Sbjct: 166 SAMEEATFLTRFARSV-TLVHRRDEFRA-SKIMLDRARNNDKIRFLTNHT-------VVA 216
Query: 316 TDGSLSV------KTNKG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVD- 366
DG +V TN G T + V A G P + GL + + + +G + V
Sbjct: 217 VDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRS---GLVREAIDVDPDGYVLVQG 273
Query: 367 EYSGTAVPSIWAVGDVTDR 385
+ T++P ++A GD+ DR
Sbjct: 274 RTTSTSLPGVFAAGDLVDR 292
>pdb|1M6I|A Chain A, Crystal Structure Of Apoptosis Inducing Factor (Aif)
Length = 493
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 48/232 (20%)
Query: 183 NAGITLIEGRGKIVDPHTVDV-----DGKLYSARHILISVGGRPF---IPDIPGSEYA-- 232
N G+ ++ G+ K+V D DG + LI+ GG P D G+E
Sbjct: 102 NGGVAVLTGK-KVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSR 160
Query: 233 ------IDSDAALDLPSKPEK-IAIVGGGYIALEFAGIF----SGLTSEV-HVFIRQKKV 280
I +L+ S+ K I I+GGG++ E A L +EV +F + +
Sbjct: 161 TTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM 220
Query: 281 LRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKS---TDGSLSVKTNKGTVDGFSHVMF 337
+ E + ++ E++ G++ P AI++S + G L +K G H++
Sbjct: 221 GKILPEYLSNWTMEKVRREGVKVM----PNAIVQSVGVSSGKLLIKLKDGRKVETDHIVA 276
Query: 338 ATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG--------TAVPSIWAVGD 381
A G PN V++ K G +E+D G A +IW GD
Sbjct: 277 AVGLEPN----------VELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGD 318
>pdb|3F8P|A Chain A, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|B Chain B, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|C Chain C, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|D Chain D, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8R|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
Length = 323
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 189 IEGRGKIVDPHTVDVDGK-LYSARHILISVGGRPFIPDIPG-SEYA---IDSDAALDLPS 243
IE RG D V K + A +++ +G + +PG E+A I + D P
Sbjct: 95 IENRG---DEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPL 151
Query: 244 -KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRD-FVAEQMSLRGI 301
K +A++GGG ALE A I S +++V++ R RD F A+ + + +
Sbjct: 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHR------------RDTFKAQPIYVETV 199
Query: 302 EF--HTEESPQAILKSTDGSLSVKT------NKGTVD--GFSHVMFATGRRPNTKNLGLE 351
+ + E +++K G VK G + + V G P T +
Sbjct: 200 KKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFA--K 257
Query: 352 KVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT 383
G++ NG I+VDE+ T+VP ++A GD T
Sbjct: 258 SNGIETDTNGYIKVDEWMRTSVPGVFAAGDCT 289
>pdb|1XHC|A Chain A, Nadh Oxidase /nitrite Reductase From Pyrococcus Furiosus
Pfu-1140779- 001
Length = 367
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 21/219 (9%)
Query: 213 ILISVGGRPFIPDIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIA------LEFAGIFSG 266
++++ G R P I G EY + D E I G I LE AG +
Sbjct: 105 LVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAE 164
Query: 267 LTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNK 326
V + R L G DE++ + + + + G++F + + + + +G L TN
Sbjct: 165 AGYHVKLIHRGAMFL-GLDEELSNMIKDMLEETGVKFFL--NSELLEANEEGVL---TNS 218
Query: 327 GTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDR- 385
G ++G + A G PN +L + G+ + I +D+ T+ ++A+GD +
Sbjct: 219 GFIEGKVKIC-AIGIVPNV-DLA-RRSGIHTGR--GILIDDNFRTSAKDVYAIGDCAEYS 273
Query: 386 --INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFS 422
I T A ME + + + EP + ++ S VF
Sbjct: 274 GIIAGTAKAAMEQARVLADILKGEPRRYNFK-FRSTVFK 311
>pdb|3F8D|A Chain A, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|B Chain B, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|C Chain C, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|D Chain D, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
Length = 323
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 189 IEGRGKIVDPHTVDVDGK-LYSARHILISVGGRPFIPDIPG-SEYA---IDSDAALDLPS 243
IE RG D V K + A +++ +G + +PG E+A I + D P
Sbjct: 95 IENRG---DEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPL 151
Query: 244 -KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRD-FVAEQMSLRGI 301
K +A++GGG ALE A I S +++V++ R RD F A+ + + +
Sbjct: 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHR------------RDTFKAQPIYVETV 199
Query: 302 EF--HTEESPQAILKSTDGSLSVKT------NKGTVD--GFSHVMFATGRRPNTKNLGLE 351
+ + E +++K G VK G + + V G P T +
Sbjct: 200 KKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFA--K 257
Query: 352 KVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT 383
G++ NG I+VDE+ T+VP ++A GD T
Sbjct: 258 SNGIETDTNGYIKVDEWMRTSVPGVFAAGDCT 289
>pdb|2Q0K|A Chain A, Oxidized Thioredoxin Reductase From Helicobacter Pylori In
Complex With Nadp+
pdb|2Q0K|B Chain B, Oxidized Thioredoxin Reductase From Helicobacter Pylori In
Complex With Nadp+
pdb|2Q0L|A Chain A, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|2Q0L|B Chain B, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|3ISH|A Chain A, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|B Chain B, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|C Chain C, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
Length = 311
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 197 DPHTVDV--DGKLYSARHILISVGGRPFIPDIPG-SEY---AIDSDAALD-LPSKPEKIA 249
D H V + DGK + A+ ++I+ GG P I G SEY + + A D K +++A
Sbjct: 88 DSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVA 147
Query: 250 IVGGGYIALEFAGIFSGLTSEVHVFIRQ 277
++GGG A+E A + + +V++ R+
Sbjct: 148 VLGGGDTAVEEAIYLANICKKVYLIHRR 175
>pdb|1GV4|A Chain A, Murine Apoptosis-Inducing Factor (Aif)
pdb|1GV4|B Chain B, Murine Apoptosis-Inducing Factor (Aif)
Length = 528
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 180 ILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPF---IPDIPGSEYA---- 232
+L + ++ RG +V + DG + LI+ GG P D G+E
Sbjct: 144 VLTGKKVVHLDVRGNMVKLN----DGSQITFEKCLIATGGTPRSLSAIDRAGAEVKSRTT 199
Query: 233 ----IDSDAALDLPSKPEK-IAIVGGGYIALEFAGIFSGLTSE------VHVFIRQKKVL 281
I AL+ S+ K I ++GGG++ E A G S+ + +F + +
Sbjct: 200 LFRKIGDFRALEKISREVKSITVIGGGFLGSELACAL-GRKSQASGIEVIQLFPEKGNMG 258
Query: 282 RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKS---TDGSLSVKTNKGTVDGFSHVMFA 338
+ + + ++ E++ G++ P AI++S + G L +K G H++ A
Sbjct: 259 KILPQYLSNWTMEKVKREGVKVM----PNAIVQSVGVSGGRLLIKLKDGRKVETDHIVTA 314
Query: 339 TGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG--------TAVPSIWAVGD 381
G PN V++ K G +E+D G A +IW GD
Sbjct: 315 VGLEPN----------VELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGD 355
>pdb|3FG2|P Chain P, Crystal Structure Of Ferredoxin Reductase For The Cyp199a2
System From Rhodopseudomonas Palustris
Length = 404
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 212 HILISVGGRPFIPDIPGSEY-------AIDSDAALD--LPSKPEKIAIVGGGYIALEFAG 262
H++++ G R + D+P + +D L +P K + + ++G G+I LEFA
Sbjct: 101 HLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDK-KHVVVIGAGFIGLEFAA 159
Query: 263 IFSGLTSEVHVFIRQKKVL-RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLS 321
EV V +V+ R +I + ++ S GI H I D
Sbjct: 160 TARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTG 219
Query: 322 VKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGD 381
V + G V+ G PN + + T G I VD+ T+ P I A+GD
Sbjct: 220 VVLSDGNTLPCDLVVVGVGVIPNVE---IAAAAGLPTAAGII-VDQQLLTSDPHISAIGD 275
>pdb|4GCM|A Chain A, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
pdb|4GCM|B Chain B, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
Length = 312
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 41/220 (18%)
Query: 186 ITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPGSE--------YAIDSDA 237
I +E +G+ ++ K +A+ ++I+ G +PG + Y D
Sbjct: 84 IKSVEDKGEY---KVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDG 140
Query: 238 ALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVF-----IRQKKVL--RGFDEDIRD 290
A K +++ ++GGG A+E + +V + +R +++L R F D D
Sbjct: 141 AF---FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKID 197
Query: 291 FVAEQMSLRGIEFHTEESPQAILKST-DGSLSVKTNKGTVDGFSHVMFATGRRPNT---K 346
F+ +L+ I + L ST DGS G V G +P T K
Sbjct: 198 FIWSH-TLKSINEKDGKVGSVTLTSTKDGSEETHEADG-------VFIYIGXKPLTAPFK 249
Query: 347 NLGL-EKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDR 385
+LG+ VG +TK+ T+VP I+A GDV D+
Sbjct: 250 DLGITNDVGYIVTKDDXT-------TSVPGIFAAGDVRDK 282
>pdb|3GD3|A Chain A, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|B Chain B, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|C Chain C, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|D Chain D, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
Length = 535
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 180 ILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPF---IPDIPGSEYA---- 232
+L + ++ RG +V + DG + LI+ GG P D G+E
Sbjct: 149 VLTGKKVVHLDVRGNMVKLN----DGSQITFEKCLIATGGTPRSLSAIDRAGAEVKSRTT 204
Query: 233 ----IDSDAALDLPSKPEK-IAIVGGGYIALEFAGIFSGLTSE------VHVFIRQKKVL 281
I AL+ S+ K I ++GGG++ E A G S+ + +F + +
Sbjct: 205 LFRKIGDFRALEKISREVKSITVIGGGFLGSELACAL-GRKSQASGIEVIQLFPEKGNMG 263
Query: 282 RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKS---TDGSLSVKTNKGTVDGFSHVMFA 338
+ + + ++ E++ G++ P AI++S + G L +K G H++ A
Sbjct: 264 KILPQYLSNWTMEKVKREGVKVM----PNAIVQSVGVSGGRLLIKLKDGRKVETDHIVTA 319
Query: 339 TGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG--------TAVPSIWAVGD 381
G PN V++ K G +E+D G A +IW GD
Sbjct: 320 VGLEPN----------VELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGD 360
>pdb|3GD4|A Chain A, Crystal Structure Of The Reduced, Nad-Bound Form Of Murine
Apoptosis Inducing Factor
pdb|3GD4|B Chain B, Crystal Structure Of The Reduced, Nad-Bound Form Of Murine
Apoptosis Inducing Factor
Length = 511
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 180 ILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPF---IPDIPGSEYA---- 232
+L + ++ RG +V + DG + LI+ GG P D G+E
Sbjct: 125 VLTGKKVVHLDVRGNMVKLN----DGSQITFEKCLIATGGTPRSLSAIDRAGAEVKSRTT 180
Query: 233 ----IDSDAALDLPSKPEK-IAIVGGGYIALEFAGIFSGLTSE------VHVFIRQKKVL 281
I AL+ S+ K I ++GGG++ E A G S+ + +F + +
Sbjct: 181 LFRKIGDFRALEKISREVKSITVIGGGFLGSELACAL-GRKSQASGIEVIQLFPEKGNMG 239
Query: 282 RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKS---TDGSLSVKTNKGTVDGFSHVMFA 338
+ + + ++ E++ G++ P AI++S + G L +K G H++ A
Sbjct: 240 KILPQYLSNWTMEKVKREGVKVM----PNAIVQSVGVSGGRLLIKLKDGRKVETDHIVTA 295
Query: 339 TGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG--------TAVPSIWAVGD 381
G PN V++ K G +E+D G A +IW GD
Sbjct: 296 VGLEPN----------VELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGD 336
>pdb|1VDC|A Chain A, Structure Of Nadph Dependent Thioredoxin Reductase
Length = 333
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 28/170 (16%)
Query: 229 SEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDI 288
S A+ AA +KP +A++GGG A+E A + S+V++ I ++ R
Sbjct: 145 SACAVCDGAAPIFRNKP--LAVIGGGDSAMEEANFLTKYGSKVYI-IHRRDAFRASK--- 198
Query: 289 RDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN---KGTVDG------FSHVMFAT 339
+ +Q +L + + + DG V K V G S + FA
Sbjct: 199 ---IMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAI 255
Query: 340 GRRPNTKNLG----LEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDR 385
G P TK L L+ G +TK G + T+VP ++A GDV D+
Sbjct: 256 GHEPATKFLDGGVELDSDGYVVTKPGTTQ------TSVPGVFAAGDVQDK 299
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
Length = 319
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 18/109 (16%)
Query: 275 IRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSH 334
I+++ + + + + V + + G+++ + + L TDG
Sbjct: 200 IKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDG---------------- 243
Query: 335 VMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT 383
V G P T L + GVK+ + G I VD T+VP ++A GDVT
Sbjct: 244 VFIYVGLIPQTSFL--KDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVT 290
>pdb|4A5L|A Chain A, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica
pdb|4A5L|B Chain B, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica
pdb|4A65|A Chain A, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica With Aucn
pdb|4A65|B Chain B, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica With Aucn
Length = 314
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 335 VMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALM 394
+ +A G PN+K LG + VK +G I + E T+V ++A GDV DR+ +
Sbjct: 242 LFYAIGHSPNSKFLGGQ---VKTADDGYI-LTEGPKTSVDGVFACGDVCDRVYRQAIVAA 297
Query: 395 EGGALA 400
G +A
Sbjct: 298 GSGCMA 303
>pdb|3LB8|A Chain A, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
pdb|3LB8|B Chain B, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
Length = 436
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 73/202 (36%), Gaps = 22/202 (10%)
Query: 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL-RGFDEDIRDFVAEQMSLRGIEFHT 305
++ ++GGGYI LE A V + +VL R + F G++ T
Sbjct: 150 RLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRT 209
Query: 306 EESPQAILKSTDGS--LSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAI 363
STD +V GT V+ G PN + L NG I
Sbjct: 210 GTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCE---LASAAGLQVDNG-I 265
Query: 364 EVDEYSGTAVPSIWAVGDVTD----------RINLTPVALMEGGALAKTLFQAEPTKPDY 413
++E+ T+ P I AVGD RI P AL + +A L P
Sbjct: 266 VINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVPRD--- 322
Query: 414 SAVPSAVFSQPPIG--QVGLSE 433
A P Q IG VGLSE
Sbjct: 323 EAAPWFWSDQYEIGLKMVGLSE 344
>pdb|1Q1R|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1R|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
Length = 431
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 73/202 (36%), Gaps = 22/202 (10%)
Query: 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL-RGFDEDIRDFVAEQMSLRGIEFHT 305
++ ++GGGYI LE A V + +VL R + F G++ T
Sbjct: 151 RLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRT 210
Query: 306 EESPQAILKSTDGS--LSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAI 363
STD +V GT V+ G PN + L NG I
Sbjct: 211 GTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCE---LASAAGLQVDNG-I 266
Query: 364 EVDEYSGTAVPSIWAVGDVTD----------RINLTPVALMEGGALAKTLFQAEPTKPDY 413
++E+ T+ P I AVGD RI P AL + +A L P
Sbjct: 267 VINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVPRD--- 323
Query: 414 SAVPSAVFSQPPIG--QVGLSE 433
A P Q IG VGLSE
Sbjct: 324 EAAPWFWSDQYEIGLKMVGLSE 345
>pdb|3MML|B Chain B, Allophanate Hydrolase Complex From Mycobacterium
Smegmatis, Msmeg0435- Msmeg0436
pdb|3MML|D Chain D, Allophanate Hydrolase Complex From Mycobacterium
Smegmatis, Msmeg0435- Msmeg0436
pdb|3MML|F Chain F, Allophanate Hydrolase Complex From Mycobacterium
Smegmatis, Msmeg0435- Msmeg0436
pdb|3MML|H Chain H, Allophanate Hydrolase Complex From Mycobacterium
Smegmatis, Msmeg0435- Msmeg0436
Length = 228
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 227 PGSEYAIDSDAALDLPSKPEKIAIVGGGYIAL--EFAGIF 264
PG Y +D DA L +P + E V G +AL EF+G++
Sbjct: 148 PGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVY 187
>pdb|3ITJ|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
Length = 338
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEE 307
+A++GGG A E A + S+V + +R K LR I AE+ I ++T
Sbjct: 176 LAVIGGGDSACEEAQFLTKYGSKVFMLVR-KDHLRA--STIMQKRAEKNEKIEILYNT-- 230
Query: 308 SPQAILKSTDGSL-------SVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKN 360
A+ DG L + K N+ T S + +A G P TK + + V +
Sbjct: 231 --VALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQ---VDTDEA 285
Query: 361 GAIE-VDEYSGTAVPSIWAVGDVTD 384
G I+ V S T+VP +A GDV D
Sbjct: 286 GYIKTVPGSSLTSVPGFFAAGDVQD 310
>pdb|3D8X|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Nadph
Dependent Thioredoxin Reductase 1
pdb|3D8X|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Nadph
Dependent Thioredoxin Reductase 1
Length = 326
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 248 IAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEE 307
+A++GGG A E A + S+V + +R K LR I AE+ I ++T
Sbjct: 164 LAVIGGGDSACEEAQFLTKYGSKVFMLVR-KDHLRA--STIMQKRAEKNEKIEILYNT-- 218
Query: 308 SPQAILKSTDGSL-------SVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKN 360
A+ DG L + K N+ T S + +A G P TK + + V +
Sbjct: 219 --VALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQ---VDTDEA 273
Query: 361 GAIE-VDEYSGTAVPSIWAVGDVTD 384
G I+ V S T+VP +A GDV D
Sbjct: 274 GYIKTVPGSSLTSVPGFFAAGDVQD 298
>pdb|3IU5|A Chain A, Crystal Structure Of The First Bromodomain Of Human
Poly-Bromodomain Containing Protein 1 (Pb1)
Length = 116
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 395 EGGALAKTLFQAEPTK---PDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFR 451
E G L LF P + PDY V S PI + + ++ ++EY D+++ TA+F+
Sbjct: 23 EQGRLLCELFIRAPKRRNQPDYYEVVSQ-----PIDLMKIQQKLKMEEYDDVNLLTADFQ 77
Query: 452 PL 453
L
Sbjct: 78 LL 79
>pdb|1ALG|A Chain A, Solution Structure Of An Hgr Inhibitor, Nmr, 10 Structures
Length = 24
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 489 EIVQGFAVAVKAGLTKAD 506
E++QGFAVAVK G TKAD
Sbjct: 7 EMLQGFAVAVKMGATKAD 24
>pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus
Eryingii
Length = 566
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 20/86 (23%)
Query: 72 DFDLFTIGAGSGG-VRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKL 130
DFD +GAG+ G V A+R + SV + E + +S E G + G VP +
Sbjct: 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLE---AGVSDENVLGAEAPLLAPGLVPNSI 58
Query: 131 LVYASKFSHEFDESNGFGWKYGTEPQ 156
F W Y T Q
Sbjct: 59 ----------------FDWNYTTTAQ 68
>pdb|1XEA|A Chain A, Crystal Structure Of A Gfo/idh/moca Family Oxidoreductase
From Vibrio Cholerae
pdb|1XEA|B Chain B, Crystal Structure Of A Gfo/idh/moca Family Oxidoreductase
From Vibrio Cholerae
pdb|1XEA|C Chain C, Crystal Structure Of A Gfo/idh/moca Family Oxidoreductase
From Vibrio Cholerae
pdb|1XEA|D Chain D, Crystal Structure Of A Gfo/idh/moca Family Oxidoreductase
From Vibrio Cholerae
Length = 323
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 457 LSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPT 516
L+ PD ++LVLC + KVLG + ++ G+ A VH T
Sbjct: 22 LAQWPD---IELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVXIHAATDVHST 78
Query: 517 AAEEFVTLRTPT 528
A F+ L PT
Sbjct: 79 LAAFFLHLGIPT 90
>pdb|2VHV|A Chain A, Crystal Structure Of The D270a Mutant Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis In Complex
With Nadh.
pdb|2VHV|B Chain B, Crystal Structure Of The D270a Mutant Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis In Complex
With Nadh
Length = 377
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 74 DLFTIGAGSGGVRASRFAANFGASVAICEL 103
D+ IGAG+ G A+R A GA+V + ++
Sbjct: 170 DVVVIGAGTAGYNAARIANGMGATVTVLDI 199
>pdb|2VHW|A Chain A, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|B Chain B, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|C Chain C, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|D Chain D, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|E Chain E, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|F Chain F, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHX|A Chain A, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|B Chain B, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|C Chain C, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|D Chain D, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|E Chain E, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|F Chain F, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHY|A Chain A, Crystal Structure Of Apo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2VHY|B Chain B, Crystal Structure Of Apo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2VHZ|A Chain A, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Closed Conformation
pdb|2VHZ|B Chain B, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Closed Conformation
Length = 377
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 74 DLFTIGAGSGGVRASRFAANFGASVAICEL 103
D+ IGAG+ G A+R A GA+V + ++
Sbjct: 170 DVVVIGAGTAGYNAARIANGMGATVTVLDI 199
>pdb|2VOE|A Chain A, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|B Chain B, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|C Chain C, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|D Chain D, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|E Chain E, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|F Chain F, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOJ|A Chain A, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
pdb|2VOJ|C Chain C, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
pdb|2VOJ|E Chain E, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
Length = 371
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 74 DLFTIGAGSGGVRASRFAANFGASVAICEL 103
D+ IGAG+ G A+R A GA+V + ++
Sbjct: 170 DVVVIGAGTAGYNAARIANGMGATVTVLDI 199
>pdb|3R9U|A Chain A, Thioredoxin-Disulfide Reductase From Campylobacter Jejuni.
pdb|3R9U|B Chain B, Thioredoxin-Disulfide Reductase From Campylobacter Jejuni
Length = 315
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 28/161 (17%)
Query: 293 AEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEK 352
+EQ G++ H + ILK++DGS ++K G + V+ TG P +K
Sbjct: 69 SEQCXRFGLK-HEXVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAP-------KK 120
Query: 353 VGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGG--ALAKTLFQAEPT- 409
G K DE+ G V S A D N VA++ GG AL + L+ A
Sbjct: 121 AGFKGE-------DEFFGKGV-STCATCDGFFYKN-KEVAVLGGGDTALEEALYLANICS 171
Query: 410 -------KPDYSAVPSAVFSQPPIGQVGLSEEQAIQE-YGD 442
+ ++ A PS V ++ L ++ E YGD
Sbjct: 172 KIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGD 212
>pdb|4B63|A Chain A, A. Fumigatus Ornithine Hydroxylase (Sida) Bound To Nadp
And Ornithine
pdb|4B64|A Chain A, A. Fumigatus Ornithine Hydroxylase (Sida) Bound To Nadp
And Lysine
pdb|4B65|A Chain A, A. Fumigatus Ornithine Hydroxylase (Sida), Reduced State
Bound To Nadp(H)
pdb|4B66|A Chain A, A. Fumigatus Ornithine Hydroxylase (Sida), Reduced State
Bound To Nadp And Arg
pdb|4B67|A Chain A, A. Fumigatus Ornithine Hydroxylase (Sida), Re-Oxidised
State Bound To Nadp And Ornithine
pdb|4B68|A Chain A, A. Fumigatus Ornithine Hydroxylase (Sida), Re-Oxidised
State Bound To Nadp And Arg
pdb|4B69|A Chain A, A. Fumigatus Ornithine Hydroxylase (Sida) Bound To
Ornithine
Length = 501
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query: 211 RHILISVGGRPFIPD--------IPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAG 262
R ++I++GG +P I S+Y A L SKP IA++G G A E
Sbjct: 204 RKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAE--- 260
Query: 263 IFSGL 267
IF L
Sbjct: 261 IFHDL 265
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,588,944
Number of Sequences: 62578
Number of extensions: 717533
Number of successful extensions: 2412
Number of sequences better than 100.0: 147
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 1864
Number of HSP's gapped (non-prelim): 167
length of query: 551
length of database: 14,973,337
effective HSP length: 104
effective length of query: 447
effective length of database: 8,465,225
effective search space: 3783955575
effective search space used: 3783955575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)