Query 008840
Match_columns 551
No_of_seqs 283 out of 2173
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 12:56:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wsd_A Spore coat protein A; o 100.0 5.9E-90 2E-94 752.9 51.7 484 37-550 2-509 (513)
2 2g23_A PHS, phenoxazinone synt 100.0 9.6E-89 3.3E-93 750.6 45.6 484 31-550 4-590 (612)
3 3gyr_A PHS, phenoxazinone synt 100.0 5E-87 1.7E-91 746.5 44.9 487 30-551 3-591 (612)
4 3od3_A Blue copper oxidase CUE 100.0 2.9E-85 9.8E-90 706.1 35.7 435 43-549 4-488 (488)
5 3abg_A Bilirubin oxidase; clea 100.0 1.3E-83 4.3E-88 704.0 44.9 449 35-550 5-474 (534)
6 3zx1_A Oxidoreductase, putativ 100.0 2.4E-83 8.3E-88 691.2 40.7 439 31-550 21-480 (481)
7 2uxt_A Protein SUFI, SUFI; oxi 100.0 8.1E-83 2.8E-87 685.8 40.6 429 40-551 2-441 (451)
8 3aw5_A Multicopper oxidase; be 100.0 1.4E-78 4.6E-83 652.1 39.6 419 37-550 3-448 (448)
9 2xu9_A Laccase; oxidoreductase 100.0 8.7E-78 3E-82 645.4 36.2 421 43-549 2-438 (439)
10 1v10_A Laccase; multicopper bl 100.0 9.6E-73 3.3E-77 617.8 42.4 413 65-550 25-490 (521)
11 1zpu_A Iron transport multicop 100.0 1.2E-72 4.1E-77 618.0 43.0 417 65-549 4-479 (534)
12 1hfu_A Laccase 1; oxidoreducta 100.0 6E-72 2E-76 609.3 38.8 411 65-550 6-469 (503)
13 2q9o_A Laccase-1; multicopper 100.0 7.3E-71 2.5E-75 607.3 40.4 411 64-549 34-519 (559)
14 1aoz_A Ascorbate oxidase; oxid 100.0 5.8E-70 2E-74 600.3 42.9 415 64-549 4-523 (552)
15 3sqr_A Laccase; multicopper ox 100.0 2.4E-67 8.1E-72 577.0 42.8 406 64-549 68-542 (580)
16 3t6v_A Laccase; beta barrel, o 100.0 8.3E-67 2.8E-71 565.7 44.2 409 65-549 6-469 (495)
17 3pxl_A Laccase; 4-copper prote 100.0 4E-66 1.4E-70 560.5 43.8 407 66-549 6-469 (499)
18 3gdc_A Multicopper oxidase; be 100.0 5.3E-48 1.8E-52 391.9 27.5 192 64-318 35-232 (288)
19 3g5w_A Multicopper oxidase typ 100.0 1.8E-45 6.2E-50 378.0 26.0 245 64-361 3-254 (318)
20 1kbv_A ANIA, major outer membr 100.0 6.2E-46 2.1E-50 383.2 22.1 283 37-387 17-309 (327)
21 2zwn_A Two-domain type laccase 100.0 1.7E-43 5.7E-48 366.9 27.7 245 64-361 4-255 (339)
22 1oe1_A Dissimilatory copper-co 100.0 8.9E-44 3.1E-48 368.8 23.8 305 36-387 4-320 (336)
23 2r7e_A Coagulation factor VIII 100.0 1.1E-44 3.7E-49 409.3 17.2 214 96-350 70-304 (742)
24 3t9w_A Small laccase, multi-co 100.0 3.1E-43 1.1E-47 358.4 23.5 178 65-316 31-223 (299)
25 2bw4_A Copper-containing nitri 100.0 4.1E-42 1.4E-46 356.9 27.3 302 34-387 8-326 (340)
26 2zoo_A Probable nitrite reduct 100.0 1.4E-41 4.8E-46 365.0 23.3 289 37-387 3-299 (442)
27 1mzy_A Copper-containing nitri 100.0 3E-41 1E-45 349.3 19.3 298 37-386 5-319 (333)
28 2j5w_A Ceruloplasmin, ferroxid 100.0 4E-40 1.4E-44 386.1 27.3 240 72-361 75-340 (1065)
29 3tas_A Small laccase, multi-co 100.0 1.2E-38 4E-43 326.9 25.5 231 84-387 25-273 (313)
30 3kw8_A Laccase, putative coppe 100.0 3.8E-38 1.3E-42 317.6 25.8 219 64-361 8-249 (276)
31 2dv6_A Nitrite reductase; elec 100.0 1.1E-36 3.9E-41 327.3 31.7 365 93-550 48-432 (447)
32 1sdd_B Coagulation factor V; c 100.0 2.7E-37 9.1E-42 346.4 20.7 223 95-361 63-311 (647)
33 1sdd_A Coagulation factor V; c 100.0 1.5E-37 5.3E-42 317.6 12.1 211 94-361 54-284 (306)
34 3cg8_A Laccase; oxidoreductase 100.0 9.6E-36 3.3E-40 308.6 25.3 219 64-361 49-290 (343)
35 2dv6_A Nitrite reductase; elec 100.0 4.6E-35 1.6E-39 314.8 26.3 260 65-387 165-435 (447)
36 2r7e_B Coagulation factor VIII 100.0 1.1E-34 3.8E-39 328.2 15.9 257 64-360 134-439 (770)
37 2j5w_A Ceruloplasmin, ferroxid 100.0 9.2E-33 3.1E-37 323.8 21.1 357 94-550 623-1057(1065)
38 2r7e_A Coagulation factor VIII 100.0 4.6E-32 1.6E-36 306.3 3.1 224 96-361 447-695 (742)
39 3cg8_A Laccase; oxidoreductase 99.8 9E-21 3.1E-25 196.2 14.0 219 276-550 70-305 (343)
40 2zwn_A Two-domain type laccase 99.8 6.4E-19 2.2E-23 182.3 15.9 226 271-550 23-276 (339)
41 3g5w_A Multicopper oxidase typ 99.8 6.8E-19 2.3E-23 180.4 15.0 229 272-549 23-274 (318)
42 3kw8_A Laccase, putative coppe 99.8 9E-19 3.1E-23 176.0 13.4 223 274-551 27-265 (276)
43 1sdd_A Coagulation factor V; c 99.8 2.3E-19 8E-24 182.9 4.7 226 273-550 51-299 (306)
44 3tas_A Small laccase, multi-co 99.8 8.6E-18 2.9E-22 171.8 15.9 217 280-551 40-271 (313)
45 2bw4_A Copper-containing nitri 99.7 4.9E-16 1.7E-20 160.7 16.9 227 271-550 59-323 (340)
46 1mzy_A Copper-containing nitri 99.6 8.7E-15 3E-19 150.9 16.5 227 271-550 52-317 (333)
47 1sdd_B Coagulation factor V; c 99.5 3.8E-14 1.3E-18 158.7 15.1 223 278-550 65-326 (647)
48 1kbv_A ANIA, major outer membr 99.5 2.7E-13 9.2E-18 139.3 18.2 218 272-550 59-306 (327)
49 3cvb_A Plastocyanin; cupredoxi 99.5 1.7E-14 5.8E-19 123.0 6.3 88 96-218 14-105 (105)
50 2r7e_B Coagulation factor VIII 99.5 2.5E-14 8.6E-19 161.9 6.1 228 278-550 195-455 (770)
51 2zoo_A Probable nitrite reduct 99.5 8.5E-13 2.9E-17 141.1 17.2 238 232-550 28-296 (442)
52 1oe1_A Dissimilatory copper-co 99.4 2E-11 6.7E-16 125.8 19.2 226 272-550 54-317 (336)
53 2xu9_A Laccase; oxidoreductase 99.2 1.5E-10 5E-15 123.6 17.6 215 94-360 182-423 (439)
54 2uxt_A Protein SUFI, SUFI; oxi 99.1 1E-09 3.5E-14 117.5 16.8 215 94-360 187-424 (451)
55 1hfu_A Laccase 1; oxidoreducta 99.1 2.1E-09 7.3E-14 116.6 18.7 228 100-360 184-453 (503)
56 1v10_A Laccase; multicopper bl 99.1 5.9E-09 2E-13 113.6 21.4 225 101-360 212-474 (521)
57 2cal_A Rusticyanin; iron respi 99.1 2.7E-10 9.1E-15 103.9 8.1 87 98-217 58-154 (154)
58 2ov0_A Amicyanin; beta-sandwic 99.1 3.9E-10 1.3E-14 96.1 8.6 76 98-217 30-105 (105)
59 1iby_A Nitrosocyanin; RED copp 99.0 5.1E-10 1.7E-14 96.4 8.7 84 87-218 29-112 (112)
60 1fwx_A Nitrous oxide reductase 99.0 1.1E-10 3.8E-15 127.2 4.3 94 83-219 500-593 (595)
61 3t6v_A Laccase; beta barrel, o 98.8 7.6E-08 2.6E-12 103.9 18.1 232 99-360 187-454 (495)
62 2gim_A Plastocyanin; beta shee 98.8 3.9E-09 1.3E-13 89.7 6.3 85 100-217 19-105 (106)
63 1aoz_A Ascorbate oxidase; oxid 98.8 2.7E-07 9.2E-12 101.2 22.4 74 284-360 419-508 (552)
64 3aw5_A Multicopper oxidase; be 98.8 1.1E-07 3.9E-12 101.4 17.3 199 94-348 174-419 (448)
65 3zx1_A Oxidoreductase, putativ 98.8 2.8E-07 9.6E-12 99.0 19.2 221 94-360 216-464 (481)
66 2q9o_A Laccase-1; multicopper 98.7 8.6E-07 3E-11 97.2 22.8 76 100-198 214-292 (559)
67 1zpu_A Iron transport multicop 98.7 1.3E-06 4.4E-11 95.3 23.2 215 94-360 172-464 (534)
68 3pxl_A Laccase; 4-copper prote 98.7 2.7E-07 9.2E-12 99.7 17.5 231 99-360 184-454 (499)
69 2aan_A Auracyanin A; cupredoxi 98.6 9.4E-08 3.2E-12 85.4 9.8 89 100-217 34-139 (139)
70 2aan_A Auracyanin A; cupredoxi 98.6 2.7E-08 9.4E-13 88.9 6.1 47 489-550 92-139 (139)
71 2g23_A PHS, phenoxazinone synt 98.6 1.9E-06 6.6E-11 95.0 21.3 85 273-360 460-574 (612)
72 3od3_A Blue copper oxidase CUE 98.6 6.5E-07 2.2E-11 96.2 16.9 86 272-359 378-472 (488)
73 2wsd_A Spore coat protein A; o 98.5 1.8E-06 6.2E-11 93.7 17.9 221 94-360 235-493 (513)
74 2plt_A Plastocyanin; electron 98.5 1.7E-07 5.8E-12 78.2 7.2 82 100-217 17-98 (98)
75 3t9w_A Small laccase, multi-co 98.5 5.8E-07 2E-11 90.8 12.1 93 100-220 189-289 (299)
76 3abg_A Bilirubin oxidase; clea 98.5 1.1E-06 3.7E-11 95.8 14.3 221 95-360 207-458 (534)
77 4hci_A Cupredoxin 1; structura 98.5 2.6E-07 8.8E-12 77.6 7.0 74 100-217 27-100 (100)
78 1pcs_A Plastocyanin; electron 98.4 5.2E-07 1.8E-11 75.2 7.0 80 100-217 18-98 (98)
79 1qhq_A Protein (auracyanin); e 98.4 1.6E-06 5.3E-11 77.5 10.5 88 100-217 32-139 (140)
80 1b3i_A PETE protein, protein ( 98.4 5.8E-07 2E-11 74.8 6.9 80 100-217 18-97 (97)
81 1bxv_A Plastocyanin; copper pr 98.4 1.1E-06 3.9E-11 71.9 8.5 74 100-217 18-91 (91)
82 3gdc_A Multicopper oxidase; be 98.4 1.9E-06 6.7E-11 86.4 11.7 102 84-217 180-287 (288)
83 3sqr_A Laccase; multicopper ox 98.3 5.4E-05 1.8E-09 83.0 23.8 227 100-360 252-527 (580)
84 3c75_A Amicyanin; copper prote 98.3 1.7E-06 5.9E-11 76.5 8.9 74 100-217 59-132 (132)
85 3ef4_A Pseudoazurin, blue copp 98.3 1.4E-06 4.7E-11 76.1 7.8 77 100-220 21-97 (124)
86 3tu6_A Pseudoazurin (blue copp 98.3 1.7E-06 5.8E-11 75.9 8.2 77 100-220 22-98 (127)
87 1kdj_A Plastocyanin; electron 98.2 1.8E-06 6.1E-11 72.5 7.1 80 100-217 16-102 (102)
88 3erx_A Pseudoazurin; copper pr 98.2 3.2E-06 1.1E-10 73.8 8.5 75 100-218 20-94 (123)
89 1byp_A Protein (plastocyanin); 98.2 6E-06 2E-10 68.9 8.9 80 100-217 16-99 (99)
90 1plc_A Plastocyanin; electron 98.2 7.3E-06 2.5E-10 68.4 8.9 83 100-217 16-99 (99)
91 1iuz_A Plastocyanin; electron 97.9 4.6E-05 1.6E-09 63.4 9.0 80 100-217 17-98 (98)
92 1paz_A Pseudoazurin precursor; 97.8 5E-05 1.7E-09 66.1 8.5 37 170-218 58-94 (123)
93 3cvb_A Plastocyanin; cupredoxi 97.8 1.1E-05 3.6E-10 67.9 3.6 43 493-550 61-104 (105)
94 1id2_A Amicyanin; beta barrel, 97.8 7E-05 2.4E-09 63.3 8.7 74 100-217 33-106 (106)
95 1pmy_A Pseudoazurin; electron 97.8 5.6E-05 1.9E-09 65.8 7.8 37 170-218 58-94 (123)
96 1cuo_A Protein (azurin ISO-2); 97.7 5.5E-05 1.9E-09 66.4 7.0 42 169-218 86-129 (129)
97 2plt_A Plastocyanin; electron 97.7 2.1E-05 7.3E-10 65.2 4.1 40 492-549 57-97 (98)
98 3ay2_A Lipid modified azurin p 97.7 4E-05 1.4E-09 70.2 5.8 42 169-218 125-167 (167)
99 3gyr_A PHS, phenoxazinone synt 97.6 0.0034 1.2E-07 69.2 21.8 86 272-360 459-574 (612)
100 1qhq_A Protein (auracyanin); e 97.6 3.1E-05 1.1E-09 68.9 3.1 48 489-550 91-139 (140)
101 2gim_A Plastocyanin; beta shee 97.6 2.4E-05 8.3E-10 65.9 2.2 43 493-550 62-105 (106)
102 1pcs_A Plastocyanin; electron 97.5 6.6E-05 2.3E-09 62.2 3.9 39 493-549 58-97 (98)
103 2ux6_A Pseudoazurin; type-1 co 97.4 0.00035 1.2E-08 60.7 7.5 35 170-218 58-92 (122)
104 2ccw_A Azurin II, AZN-2; elect 97.4 0.00028 9.6E-09 61.9 6.5 42 169-218 86-129 (129)
105 1byp_A Protein (plastocyanin); 97.3 0.00013 4.5E-09 60.5 4.0 39 493-549 59-98 (99)
106 2iaa_C Azurin; quinoprotein, t 97.2 0.0005 1.7E-08 60.2 6.5 42 169-218 85-128 (128)
107 1b3i_A PETE protein, protein ( 97.2 0.00014 4.7E-09 60.2 2.8 39 493-549 57-96 (97)
108 1kdj_A Plastocyanin; electron 97.2 0.00016 5.4E-09 60.4 3.0 41 491-549 59-101 (102)
109 1bxv_A Plastocyanin; copper pr 97.2 0.00024 8.4E-09 57.7 3.9 39 493-549 51-90 (91)
110 1nwp_A Azurin; electron transp 97.1 0.0024 8.1E-08 55.8 9.9 41 169-217 86-128 (128)
111 3sbq_A Nitrous-oxide reductase 97.0 0.0021 7.1E-08 69.2 9.6 80 100-217 557-636 (638)
112 1iby_A Nitrosocyanin; RED copp 96.8 0.0013 4.3E-08 55.9 4.8 42 495-551 70-112 (112)
113 1plc_A Plastocyanin; electron 96.4 0.0018 6E-08 53.6 3.4 39 493-549 59-98 (99)
114 3s8f_B Cytochrome C oxidase su 96.3 0.13 4.5E-06 46.7 15.4 75 101-218 93-168 (168)
115 4hci_A Cupredoxin 1; structura 95.7 0.0088 3E-07 49.5 4.3 38 496-549 61-99 (100)
116 3fsa_A Azurin; copper, cupredo 95.0 0.13 4.4E-06 44.4 9.3 38 169-217 86-125 (125)
117 2cua_A Protein (CUA); CUA cent 94.8 0.11 3.8E-06 45.5 8.8 74 102-217 61-134 (135)
118 2cal_A Rusticyanin; iron respi 94.4 0.022 7.5E-07 51.3 3.2 38 497-549 113-153 (154)
119 2ov0_A Amicyanin; beta-sandwic 93.5 0.044 1.5E-06 45.7 3.2 33 497-549 71-104 (105)
120 1iuz_A Plastocyanin; electron 92.9 0.084 2.9E-06 43.2 4.0 37 495-549 60-97 (98)
121 3ef4_A Pseudoazurin, blue copp 90.0 0.16 5.4E-06 43.8 2.8 36 497-550 58-94 (124)
122 1fwx_A Nitrous oxide reductase 89.9 0.24 8.2E-06 54.0 4.7 39 496-550 549-591 (595)
123 3erx_A Pseudoazurin; copper pr 89.8 0.23 7.9E-06 42.7 3.7 35 498-550 58-93 (123)
124 3tu6_A Pseudoazurin (blue copp 88.8 0.21 7.2E-06 43.2 2.7 35 498-550 60-95 (127)
125 1id2_A Amicyanin; beta barrel, 86.1 0.46 1.6E-05 39.4 3.2 34 496-549 71-105 (106)
126 1pmy_A Pseudoazurin; electron 86.0 0.41 1.4E-05 41.1 2.9 36 497-550 57-93 (123)
127 1paz_A Pseudoazurin precursor; 85.1 0.55 1.9E-05 40.3 3.2 35 498-550 58-93 (123)
128 3c75_A Amicyanin; copper prote 83.2 0.72 2.5E-05 40.0 3.2 35 495-549 96-131 (132)
129 3ay2_A Lipid modified azurin p 82.8 0.76 2.6E-05 41.6 3.3 46 493-551 121-167 (167)
130 3isy_A Bsupi, intracellular pr 82.1 6.6 0.00023 33.4 8.7 84 276-360 3-100 (120)
131 2iaa_C Azurin; quinoprotein, t 76.4 2 6.8E-05 37.0 3.7 46 494-551 82-128 (128)
132 1cuo_A Protein (azurin ISO-2); 75.4 2.1 7.2E-05 36.9 3.7 45 494-550 83-128 (129)
133 2ccw_A Azurin II, AZN-2; elect 72.4 3 0.0001 35.9 3.9 46 494-551 83-129 (129)
134 3fsa_A Azurin; copper, cupredo 70.6 3.6 0.00012 35.2 3.9 45 490-549 79-124 (125)
135 1nwp_A Azurin; electron transp 69.9 3.2 0.00011 35.7 3.5 44 494-549 83-127 (128)
136 2ux6_A Pseudoazurin; type-1 co 68.4 3.4 0.00012 35.1 3.3 34 497-550 57-91 (122)
137 2cua_A Protein (CUA); CUA cent 60.2 8.2 0.00028 33.4 4.2 39 496-550 92-134 (135)
138 3sbq_A Nitrous-oxide reductase 50.7 14 0.00048 39.9 4.8 40 496-549 594-635 (638)
139 2r39_A FIXG-related protein; s 49.4 30 0.001 28.8 5.9 48 290-349 34-83 (118)
140 1cyx_A CYOA; electron transpor 38.1 84 0.0029 29.1 7.4 77 101-219 41-118 (205)
141 1iz6_A Initiation factor 5A; S 29.6 73 0.0025 27.5 5.2 47 271-317 15-69 (138)
142 3s8f_B Cytochrome C oxidase su 26.5 66 0.0023 28.8 4.5 41 496-550 125-167 (168)
143 1yew_A Particulate methane mon 25.6 5.2E+02 0.018 25.9 13.5 16 168-186 320-335 (382)
144 2eif_A IF-5A, protein (eukaryo 24.2 1.5E+02 0.0053 25.2 6.3 48 270-317 18-73 (136)
No 1
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=5.9e-90 Score=752.88 Aligned_cols=484 Identities=40% Similarity=0.694 Sum_probs=391.9
Q ss_pred CCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQ 116 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~ 116 (551)
+|++|.++||+||++++....+|. .+++|.+.+.+++++++.+.+.+|+|| |++||||||+++||+|+|+++
T Consensus 2 ~~~~~~~~L~~p~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~N-----G~~PGPtI~~~~Gd~v~v~v~ 73 (513)
T 2wsd_A 2 TLEKFVDALPIPDTLKPVQQSKEK---TYYEVTMEECTHQLHRDLPPTRLWGYN-----GLFPGPTIEVKRNENVYVKWM 73 (513)
T ss_dssp CCCSSCSBCCCCCBCCCSEECSSC---EEEEEEEEEEEECSSTTSCCEEEEEET-----TBSSCCBEEEETTCCEEEEEE
T ss_pred CcCcccccCCCCccccccccCCCc---eEEEEEEEEeeeeeCCCCCCceEEEEC-----CCccCceEEECCCCEEEEEEE
Confidence 689999999999999865444453 358888999999999988789999998 999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCC-CCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEe
Q 008840 117 NHLPPNHILPIDPTIPTAMP-SNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYH 195 (551)
Q Consensus 117 N~L~~~~~~~~~~~~~~~~~-~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH 195 (551)
|+|++.+.++++.+++++.. .....++|+|||||+++++.+||+|+.+++||+|.||++|.+++|+|++++++||||||
T Consensus 74 N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH 153 (513)
T 2wsd_A 74 NNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYH 153 (513)
T ss_dssp ECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCGGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEE
T ss_pred eCCCccccCccccccccccccccCCCCCcEEEcCCCcCCCccCCCCcccccCCcccCCCccceEEEEEecCCCccceEEC
Confidence 99998888888888876421 13445699999999999999999999889999999996555559999998899999999
Q ss_pred ccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCC--CC-CCCCCCCccCCc
Q 008840 196 DHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNN--PS-IHPQWQPEYFGD 272 (551)
Q Consensus 196 ~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~--~~-~~~~~~~~~~gd 272 (551)
||.++.+++|+++||+|+|||++++ +.++.+|+. ++|++|+|+||+++.+|++.+.....+ +. ..+.|..++.++
T Consensus 154 ~H~~~~t~~q~~~Gl~G~liV~~~~-~~~~~lp~~-d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 231 (513)
T 2wsd_A 154 DHAMALTRLNVYAGLVGAYIIHDPK-EKRLKLPSD-EYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231 (513)
T ss_dssp ECCTTTHHHHHHHTCEEEEEEECGG-GGGGCCCCG-GGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCS
T ss_pred CCCCCcchhhhhccCeEEEEEeccc-cccccCCCC-CCcEEEEEEeeecCCCCceecccccccccccccccccccccccc
Confidence 9999999999999999999999776 556778886 899999999999999999876532111 00 023456677899
Q ss_pred eEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcCCc-eEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCC
Q 008840 273 VIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGL-RFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSEST 351 (551)
Q Consensus 273 ~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~-~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~ 351 (551)
+++|||+.+|+++|++++|||||||+|+++.++|+| +|| +|+||++||+++++|+.+++|.|+|||||||+|++++.+
T Consensus 232 ~~liNG~~~p~~~v~~~~~RlRliNa~~~~~~~~~i-~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~ 310 (513)
T 2wsd_A 232 TILVNGKVWPYLEVEPRKYRFRVINASNTRTYNLSL-DNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYE 310 (513)
T ss_dssp EEEETTEESCEEECCSSEEEEEEEECCSSCCEEEEE-TTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGT
T ss_pred eEEECCcccceEEecCCEEEEEEEccCCcceEEEEE-CCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCC
Confidence 999999999999999999999999999999999999 588 999999999999889999999999999999999999877
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC-CCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCcceE
Q 008840 352 SDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR-ETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHL 430 (551)
Q Consensus 352 g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~-~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~ 430 (551)
|..+.|.+.... .+.........||+|++.+.. ..++..+|..|...+.++...+..+|.+.|....+..|. ..|
T Consensus 311 g~~~~l~~~~~~---~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~ 386 (513)
T 2wsd_A 311 GESIILANSAGC---GGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQDEYGR-PVL 386 (513)
T ss_dssp TCEEEEEECCCS---SSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEECTTSC-EEE
T ss_pred CcEEEEEecccc---cccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeecCCCCC-ceE
Confidence 777888875421 111111234589999987532 234556788777655444444556788887754443343 358
Q ss_pred EEcccccCCCCCCCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeecc---------------CCccCCCCcCCCcC
Q 008840 431 LINAKTLEDPVTETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHAC---------------GKKQAVPVHEQGWK 493 (551)
Q Consensus 431 ~INg~~f~~~~~~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~---------------G~~~~~~~~e~~wk 493 (551)
+|||+.|+++....++ .+++|.|.|.+...|+||+|+|.| ++..... |.+.++..++++||
T Consensus 387 ~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F--~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 464 (513)
T 2wsd_A 387 LLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSF--RVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWK 464 (513)
T ss_dssp EETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCE--EEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCB
T ss_pred eECCccCCCcccEecCCCCEEEEEEEcCCCCCcCEeEeCceE--EEEEecCcccccccccccccccCCCCCCCccccCcc
Confidence 8999999876443333 389999999988899999999955 4544221 22223456778999
Q ss_pred ccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 494 NVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 494 DTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
|||.|+||++++|++||+ + ||| ||||||||+|||.|||+.|+|.
T Consensus 465 DTv~v~pg~~~~i~~~f~--d-----------npG~w~~HCHil~H~~~GMm~~~~V~ 509 (513)
T 2wsd_A 465 DTIQAHAGEVLRIAATFG--P-----------YSGRYVWHCHALEHEDYDMMRPMDIT 509 (513)
T ss_dssp SEEEECTTEEEEEEEECC--S-----------CCEEEEEEESCHHHHTTTCEEEEEEB
T ss_pred cEEEeCCCCEEEEEEEec--C-----------CCCCEEEEcCChhhhhcCCceeEEEe
Confidence 999999999999999996 1 788 9999999999999999999996
No 2
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=9.6e-89 Score=750.61 Aligned_cols=484 Identities=29% Similarity=0.475 Sum_probs=374.1
Q ss_pred CcCCCCCCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCE
Q 008840 31 GLINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGID 110 (551)
Q Consensus 31 ~~~~~~~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~ 110 (551)
.+.++..|++|+++||+||++++.. ..+ ..+|+|.+++++++++++++.+++|+|| |++|||||++++||+
T Consensus 4 ~~~~~~~l~~f~~~L~iPp~~~~~~-~~~---~~~~~l~~~~~~~~l~~~~~~t~~~~yn-----G~~PGPtI~~~~Gd~ 74 (612)
T 2g23_A 4 QAPAPGELTPFAAPLTVPPVLRPAS-DEV---TRETEIALRPTWVRLHPQLPPTLMWGYD-----GQVPGPTIEVRRGQR 74 (612)
T ss_dssp ---CTTCCCTTCSBCCCCCEECCCC-SCT---TBCEEEEEEEEEECSCTTSCCEEEEEET-----TBSSCCEEEEETTCC
T ss_pred cCCCCCCCCccccCCCCCCcccCcC-CCC---eEEEEEEEEEEEEEECCCCcceEEEEEC-----CccCCceEEEECCeE
Confidence 5677899999999999999998632 222 2478999999999999999899999998 999999999999999
Q ss_pred EEEEEEeCCCCCCCCCCCC----------CCCCCCCCCC----------CCCCeEEeeCCCCCCCCCCCCCCcceecccc
Q 008840 111 TYVTWQNHLPPNHILPIDP----------TIPTAMPSNK----------KGVPTVVHLHGGIDEPESDGYAKSWFTAGFE 170 (551)
Q Consensus 111 v~v~l~N~L~~~~~~~~~~----------~~~~~~~~~~----------~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i 170 (551)
|+|+|+|+|++.+.++++. +.....|+.. ...+|++||||+++.+.+||+|. |.|
T Consensus 75 v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~~DG~p~-----~~i 149 (612)
T 2g23_A 75 VRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGGGNDGWAD-----NAV 149 (612)
T ss_dssp EEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCTTTSCCGG-----GCB
T ss_pred eeEEEEECcCCcccccccccccccccCCCcccccccccccccccccccccCCceEEEcCCCCCCCccCCCCc-----CCC
Confidence 9999999999865544332 1111111111 11359999999999999999874 578
Q ss_pred CCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCc-
Q 008840 171 EKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGS- 249 (551)
Q Consensus 171 ~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~- 249 (551)
.||++| +|+|+++|++||||||||.++.++.|+++||+|+|||++++ +.++.||++ ++|++|+||||+++.+++
T Consensus 150 ~PG~s~---~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~-~~~~~lp~~-d~d~~l~l~Dw~~~~~~~~ 224 (612)
T 2g23_A 150 GFGDAQ---LSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDE-EDALGLPSG-DREIPLLIADRNLDTDEDG 224 (612)
T ss_dssp CTTCEE---EEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHH-HHTTTCCCG-GGEEEEEEEEECEEECTTS
T ss_pred CCCCeE---EEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcc-cccccCCCC-cceEEEEEEEEeccCCccc
Confidence 999999 99999988999999999999999999999999999999776 566778886 999999999999987642
Q ss_pred -----eEecC---CCCCCC-CCCCCCCccCCceEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcCCc-------e
Q 008840 250 -----IYMNS---TGNNPS-IHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGL-------R 313 (551)
Q Consensus 250 -----~~~~~---~g~~~~-~~~~~~~~~~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~-------~ 313 (551)
+.|.. ....+. ..+.| .++.+|.++|||+.+|+++|++++|||||||+|+++.|+|+|+ +| +
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~p~~-~~~~gd~~lVNG~~~p~~~V~~g~yRlRliNas~~r~~~l~i~-~h~g~~~~~~ 302 (612)
T 2g23_A 225 RLNGRLLHKTVIVQQSNPETGKPVS-IPFFGPYTTVNGRIWPYADVDDGWYRLRLVNASNARIYNLVLI-DEDDRPVPGV 302 (612)
T ss_dssp CEEEEEEEEEEEEESSCSSSSCCEE-CCCCCSEEEETTEESCEEEEESSEEEEEEEECCSSCCEEEEEE-CTTSCBCTTS
T ss_pred ccccccccccccccccccccCcccc-cCCcCCEEEECCccCCeEEecCCeEEEEEEecCCCeEEEEEEc-CCCCccCCCc
Confidence 22211 000000 01111 2467999999999999999999999999999999999999995 66 8
Q ss_pred EEEEEcCCCCCCCceEec------EEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCC-CC-CCCCCceEEEEEcc
Q 008840 314 FIHVGSDSAYLGKPVVTN------DTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGN-PV-NDANGKVMKFIILK 385 (551)
Q Consensus 314 ~~via~DG~~l~~P~~~~------~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~-~~-~~~~~~vm~f~v~~ 385 (551)
|+|||+||++|++|+.++ +|.|+|||||||||+|++.+|+++.|+|......+... .. +.....||+|+|.+
T Consensus 303 ~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~ 382 (612)
T 2g23_A 303 VHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRE 382 (612)
T ss_dssp EEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEEC
T ss_pred EEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEcc
Confidence 999999999998899999 99999999999999999988889999997643222111 01 11345799999987
Q ss_pred CCCCCCCCCCCCCCC-CCCCCCccCceeeEEeee-----------------ecc----------------cCCCCcceEE
Q 008840 386 NRETDPWRVPEKLIE-YPSADLSAASTTRYIAMY-----------------EYT----------------SNTGKPTHLL 431 (551)
Q Consensus 386 ~~~~~~~~lP~~L~~-~~~~~~~~~~~~r~~~l~-----------------~~~----------------~~~g~~~~~~ 431 (551)
....+++.+|+.|++ +++++.......|.+.+. +.. ...|....|+
T Consensus 383 ~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 462 (612)
T 2g23_A 383 TCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYR 462 (612)
T ss_dssp CSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCChhhccccccCCcccccceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEE
Confidence 765567789999976 444433222333444431 100 1123335689
Q ss_pred EcccccCCCCCCCcce--eeeEEEEeeeeeeeeeccccCceeeeeeeec-----------cC----------CccCCCCc
Q 008840 432 INAKTLEDPVTETPKT--LDQTELVNLEEFKACMNKINDAIKCNLSKHA-----------CG----------KKQAVPVH 488 (551)
Q Consensus 432 INg~~f~~~~~~~~~~--~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~-----------~G----------~~~~~~~~ 488 (551)
|||+.|++.....++. +++|.|+|.+.+.|+||.|++.| ++.... +| +..++.++
T Consensus 463 iNG~~~~~~~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F--~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 540 (612)
T 2g23_A 463 RTAATFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADF--QVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPN 540 (612)
T ss_dssp EEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCCE--EEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTT
T ss_pred ECCccCCCCCceEecCCCEEEEEEEeCCCCCCCeEEcCceE--EEecccCcccccccccccCcccccccccccccCCCcc
Confidence 9999998754443332 89999999999999999999965 443321 11 11345678
Q ss_pred CCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 489 e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
|++|||||.|.||++++|+|+|+. +|| ||||||||+|||+|||++|+|.
T Consensus 541 e~~~kDTv~v~Pg~~~~i~~~~~~-------------~pG~w~~HCHil~Hed~GMm~~f~V~ 590 (612)
T 2g23_A 541 ELGHKDVFQVPGPQGLRVMGKFDG-------------AYGRFMYHCHLLEHEDMGMMRPFVVM 590 (612)
T ss_dssp SSSCBSEEEECSSEEEEEEEECCS-------------CCEEEEEEESSHHHHTTTCEEEEEEE
T ss_pred cccccCeEEECCCcEEEEEEEeCC-------------CCccEEEEeCchhHhhcCCceEEEEC
Confidence 899999999999999999999981 568 9999999999999999999986
No 3
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=5e-87 Score=746.50 Aligned_cols=487 Identities=29% Similarity=0.454 Sum_probs=366.2
Q ss_pred CCcCCCCCCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCC
Q 008840 30 GGLINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGI 109 (551)
Q Consensus 30 ~~~~~~~~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd 109 (551)
..+.++..+++|.++||+||++++... .+ ..+++|.+++.+++++++++.+++|+|| |++|||||+|++||
T Consensus 3 ~~~p~p~~~~~f~~pl~~pp~~~~~~~-~~---~~~~~i~~~~~~~~~~~~~~~t~~~gyN-----g~~PGPti~~~~Gd 73 (612)
T 3gyr_A 3 EQAPAPGELTPFAAPLTVPPVLRPASD-EV---TRETEIALRPTWVRLHPQLPPTLMWGYD-----GQVPGPTIEVRRGQ 73 (612)
T ss_dssp ----CTTCCCTTCSBCCCCCEECCCCS-CT---TBCEEEEEEEEEECSCTTSCCEEEEEET-----TBSSCCEEEEETTC
T ss_pred ccCCCCCCCCcccccCCCCCccCCccC-CC---cceEEEEEEEEEEeecCCCCcceEEEEC-----CcccCcEEEEeCCc
Confidence 345667889999999999999976432 22 1468899999999999999889999998 99999999999999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCCC----CCC------CC----------CCCCCCeEEeeCCCCCCCCCCCCCCcceeccc
Q 008840 110 DTYVTWQNHLPPNHILPIDPTIP----TAM------PS----------NKKGVPTVVHLHGGIDEPESDGYAKSWFTAGF 169 (551)
Q Consensus 110 ~v~v~l~N~L~~~~~~~~~~~~~----~~~------~~----------~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~ 169 (551)
+|+|+|+|+|++.+.+.++.... +.. +. ....+.|+|||||+++++.+||+| ||+
T Consensus 74 ~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~~DGv~-----q~~ 148 (612)
T 3gyr_A 74 RVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGGGNDGWA-----DNA 148 (612)
T ss_dssp CEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCTTTSCCG-----GGC
T ss_pred EEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCCCCceEEcCCCccCCcccCcc-----cCc
Confidence 99999999999854332110000 000 00 124567999999999999999975 678
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCc
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGS 249 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~ 249 (551)
|.||++| +|+|+++|++||||||+|.++.++.|+++||+|+|||+|++ +..+.+|.+ ++|++|+|+||+|+.+++
T Consensus 149 I~PG~~~---~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~-~~~~~~p~~-d~e~~lvl~Dw~~~~~~~ 223 (612)
T 3gyr_A 149 VGFGDAQ---LSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDE-EDALGLPSG-DREIPLLIADRNLDTDED 223 (612)
T ss_dssp BCTTCEE---EEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHH-HHTTTCCCG-GGEEEEEEEEECEEECTT
T ss_pred cCCCCCE---EEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCcc-ccccCCCCC-CccEEEEEEEEecccccc
Confidence 9999999 99999998899999999999999999999999999999877 667778886 999999999999987765
Q ss_pred eEecC---------CCCCCCCCCCCCCccCCceEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcCCc-------e
Q 008840 250 IYMNS---------TGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGL-------R 313 (551)
Q Consensus 250 ~~~~~---------~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~-------~ 313 (551)
..+.. ....+.....+..++.|+.++|||+.+|.+.|++++|||||||+|+++.|+|+|. +| +
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~p~~~v~~~~yRlRliNas~~~~~~l~i~-~h~~~~~~~~ 302 (612)
T 3gyr_A 224 GRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIWPYADVDDGWYRLRLVNASNARIYNLVLI-DEDDRPVPGV 302 (612)
T ss_dssp SCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEESCEEEEESSEEEEEEEECCSSCCEEEEEE-CTTSCBCTTS
T ss_pred cccccccccCCccccccCCCCCCccccCccCceeeecCCccceEeccCcEEEEEEEeccCCcceeEEEc-cCCCccCCce
Confidence 43211 0111111122334677999999999999999999999999999999999999995 65 6
Q ss_pred EEEEEcCCCCCCCceEec------EEEEccCceEEEEEEcCCCCCceEEEecCCCCCCC-CCCC-CCCCCCceEEEEEcc
Q 008840 314 FIHVGSDSAYLGKPVVTN------DTVLAPAEIADVVIDFSESTSDVAILANDAPYPYP-AGNP-VNDANGKVMKFIILK 385 (551)
Q Consensus 314 ~~via~DG~~l~~P~~~~------~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~-~g~~-~~~~~~~vm~f~v~~ 385 (551)
|+|||+||++|++|+.++ .|.|+|||||||||++++..+.++.+.+....... .... .......++++++..
T Consensus 303 ~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (612)
T 3gyr_A 303 VHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRE 382 (612)
T ss_dssp EEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEEC
T ss_pred EEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccC
Confidence 999999999998888764 79999999999999999988888888876432111 0011 112345799999887
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CccCceeeEEee-----------------eec----------------ccCCCCcceEE
Q 008840 386 NRETDPWRVPEKLIEYPSAD-LSAASTTRYIAM-----------------YEY----------------TSNTGKPTHLL 431 (551)
Q Consensus 386 ~~~~~~~~lP~~L~~~~~~~-~~~~~~~r~~~l-----------------~~~----------------~~~~g~~~~~~ 431 (551)
....+...+|..+....... .......+...+ ... ....+....|.
T Consensus 383 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (612)
T 3gyr_A 383 TCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYR 462 (612)
T ss_dssp CSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEE
T ss_pred CCCCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccCCCcccccc
Confidence 66556667777665432211 111111111111 000 00112345678
Q ss_pred EcccccCCCCCCCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeecc---------------------CCccCCCCc
Q 008840 432 INAKTLEDPVTETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHAC---------------------GKKQAVPVH 488 (551)
Q Consensus 432 INg~~f~~~~~~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~---------------------G~~~~~~~~ 488 (551)
+|++.|++.....++ .+++|.|.|.+.+.|+||+|+|.| +|..... ....++.++
T Consensus 463 ~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F--~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (612)
T 3gyr_A 463 RTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADF--QVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPN 540 (612)
T ss_dssp EEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEE--EEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTT
T ss_pred ccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcE--EEEeecCCcCccccccccccccccccccccccCcccc
Confidence 999999875444333 289999999999999999999955 5543210 011245678
Q ss_pred CCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 489 e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
+++|||||.|++|++++|++||+ +||| ||||||||+|||+|||++|+|+.
T Consensus 541 ~~~~kDTv~v~~~~~v~i~~rfa-------------dnpG~w~~HCHil~Hed~GMM~~f~V~~ 591 (612)
T 3gyr_A 541 ELGHKDVFQVPGPQGLRVMGKFD-------------GAYGRFMYHCHLLEHEDMGMMRPFVVMP 591 (612)
T ss_dssp CSSCBSEEEECSSEEEEEEEECC-------------SCCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred cCCCCcEEEECCCCEEEEEEEeC-------------CCCcceEEcCCChHHHhCcCCcceEEeC
Confidence 89999999999999999999986 2788 99999999999999999999973
No 4
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.9e-85 Score=706.08 Aligned_cols=435 Identities=21% Similarity=0.332 Sum_probs=343.4
Q ss_pred ccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCC
Q 008840 43 DELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPN 122 (551)
Q Consensus 43 ~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~ 122 (551)
.+||+||++++. .+ ..+++.+.+.++++ ++. .+.+|+|| |++||||||+++||+|+|+++|+|++
T Consensus 4 ~~LpiP~~~~~~---~~----~~~~l~~~~~~~~~-~G~-~~~~~~~N-----G~~pGP~i~~~~Gd~v~v~~~N~l~~- 68 (488)
T 3od3_A 4 PTLPIPDLLTTD---AR----NRIQLTIGAGQSTF-GGK-TATTWGYN-----GNLLGPAVKLQRGKAVTVDIYNQLTE- 68 (488)
T ss_dssp CBCCCCCEECCC---TT----SEEEEEEEEEEEEE-TTE-EEEEEEES-----SSSBCCEEEEETTCEEEEEEEECSSS-
T ss_pred CCCCCCCcccCC---CC----eeEEEEEEEEEEcc-CCe-EEEEEEEC-----CcCCCCeEEEeCCeEEEEEEEeCCcC-
Confidence 689999999752 12 25777788888888 555 78999998 99999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCch
Q 008840 123 HILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLT 202 (551)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t 202 (551)
+|+|||||+++++.+||+| +|+|.||++| +|+|+++|++||||||||.++.+
T Consensus 69 --------------------~tsiHwHG~~~~~~~DG~p-----~~~i~PG~~~---~Y~f~~~~~aGT~wYH~H~~~~t 120 (488)
T 3od3_A 69 --------------------ETTLHWHGLEVPGEVDGGP-----QGIIPPGGKR---SVTLNVDQPAATCWFHPHQHGKT 120 (488)
T ss_dssp --------------------CBCCEEETCCCCHHHHCCT-----TCCBCTTCEE---EEEEECCSCSEEEEEECCCTTTH
T ss_pred --------------------ceeEeecccccCcccCCCC-----cCcCcCCCeE---EEEEecCCCceeEEEEecCCCcc
Confidence 8999999999999999987 5789999999 99999987899999999999999
Q ss_pred hhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc
Q 008840 203 RVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW 281 (551)
Q Consensus 203 ~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~ 281 (551)
+.|+++||+|+|||++++ +..+.+|+.+ ++|++|+|+||+++.+|++.+.... .....++.||.++|||+.+
T Consensus 121 ~~q~~~GL~G~liV~~~~-~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~------~~~~~g~~gd~~lvNG~~~ 193 (488)
T 3od3_A 121 GRQVAMGLAGLVVIEDDE-ILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDV------MTAAVGWFGDTLLTNGAIY 193 (488)
T ss_dssp HHHHHTTCCEEEEEECHH-HHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSH------HHHHHCCCCSEEEETTBSS
T ss_pred hhhhhccceeEEEEcCcc-ccccCCcccCCccceeEEEEEeeecCCCceeccccc------cccccCCCCCEEEEcCCcC
Confidence 999999999999999876 5566777743 5799999999999999887543210 0001245689999999999
Q ss_pred CceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 282 PRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 282 P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|++.+++++|||||||+|+++.|+|+|.|||+|+||++||+++.+|+.+++|.|+|||||||+|++++ +++|.|++..
T Consensus 194 p~~~v~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~--~~~~~l~~~~ 271 (488)
T 3od3_A 194 PQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTLP 271 (488)
T ss_dssp CEEEEEEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEECC
T ss_pred ccEecCCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC--CceEEEEEec
Confidence 99999889999999999999999999977999999999999988999999999999999999999997 4588888754
Q ss_pred CCCCCCCCCC--CCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeee--c-----------------
Q 008840 362 PYPYPAGNPV--NDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYE--Y----------------- 420 (551)
Q Consensus 362 ~~~~~~g~~~--~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~--~----------------- 420 (551)
... .|... ......|++++.... .++..+|..|.++++++..+...+|++.|.. .
T Consensus 272 ~~~--~g~~~~~~~~~~~~~~~~~~~~--~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (488)
T 3od3_A 272 VSQ--MGMAIAPFDKPHPVMRIQPIAI--SASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQA 347 (488)
T ss_dssp CSS--TTTTSTTTTSCEEEEEEEEEEE--ECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGG
T ss_pred cCC--CCcccccccCccceeEeccccc--CCCCCCCcccccCCCCcccccccceEEEEEecccccccccccccccccccc
Confidence 221 12111 112234666665432 2456789999887764433333345555421 0
Q ss_pred -ccC----------CCC------------cceEEEcccccCCCCC-CCcc--eeeeEEEEeee-eeeeeeccccCceeee
Q 008840 421 -TSN----------TGK------------PTHLLINAKTLEDPVT-ETPK--TLDQTELVNLE-EFKACMNKINDAIKCN 473 (551)
Q Consensus 421 -~~~----------~g~------------~~~~~INg~~f~~~~~-~~~~--~~~~~~l~n~~-~~~~~~~~~~~~~~~~ 473 (551)
... .|. ...|+|||+.|++... ..++ .+++|.+.|.+ .+.|++|.|++.| +
T Consensus 348 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F--~ 425 (488)
T 3od3_A 348 MAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQF--R 425 (488)
T ss_dssp GTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCB--E
T ss_pred cccccccccccccccCccccccccccccccceeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceE--E
Confidence 000 110 1137999999985422 2222 28999999988 6789999999854 6
Q ss_pred eeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 474 LSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 474 v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+.. .+| .++++++.+|||||+|+ |++++|+|+|+. +. ++|| ||||||||+|||+|||++|+|
T Consensus 426 Vl~-~~g--~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~--~~--------~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 426 ILS-ENG--KPPAAHRAGWKDTVKVE-GNVSEVLVKFNH--DA--------PKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EEE-BTT--BCCCGGGSSSBSEEEES-SSEEEEEECBCS--CC--------CGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred Eec-cCC--CccccccCCceeEEEeC-CCEEEEEEEecc--CC--------CCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 654 467 45556788999999999 999999999983 21 2567 999999999999999999987
No 5
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.3e-83 Score=703.98 Aligned_cols=449 Identities=30% Similarity=0.470 Sum_probs=357.3
Q ss_pred CCCCccccccCCCCccccceec----cCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCE
Q 008840 35 PLKLEMFVDELPDMPKIKGYYA----ANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGID 110 (551)
Q Consensus 35 ~~~~~~~~~~lp~pp~~~~~~~----~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~ 110 (551)
++.+++|.++||+||++++... ..|... .++++.+.+.++++.++...+.+|+|| |++||||||+++||+
T Consensus 5 ~p~~~~~~~~lpip~~~~~~~~~~~p~~g~~~-~~~~l~~~~~~~~~~p~~~~~~~~~~N-----G~~PGPtI~~~~Gd~ 78 (534)
T 3abg_A 5 SPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEI-WYYEVEIKPFTHQVYPDLGSADLVGYD-----GMSPGPTFQVPRGVE 78 (534)
T ss_dssp CCCCCTTCSBCCCCCBCCCCCSCCSTTSSSCC-EEEEEEEECCEECCSTTTCCEECBEET-----SCSSEEEEEEETTCC
T ss_pred CCCccccCCCCCCCCccCccccccccCCCCce-EEEEEEEEEEEEEecCCCCceeEEEEC-----CcCcCceEEEeCCcE
Confidence 4556999999999999986421 134322 367888888888899888678999998 999999999999999
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCc
Q 008840 111 TYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPG 190 (551)
Q Consensus 111 v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~G 190 (551)
|+|+++|+|+. +|+|||||+++++.+||+|+ |.|.||++| +|+|+++|++|
T Consensus 79 v~v~v~N~l~~---------------------~tsiHwHGl~~~~~~DG~~~-----~~i~PG~~~---~Y~f~~~~~~G 129 (534)
T 3abg_A 79 TVVRFINNAEA---------------------PNSVHLHGSFSRAAFDGWAE-----DITEPGSFK---DYYYPNRQSAR 129 (534)
T ss_dssp EEEEEEECSSS---------------------CBCEEEETCCCCTTTTTCSS-----SCBSSCSCC---CEEECCCSSSC
T ss_pred EEEEEEECCCC---------------------CceEEECCCcCCCCCCCCCC-----CCCCCCCeE---EEEEecCCcce
Confidence 99999999997 89999999999999999864 568999999 99999988899
Q ss_pred eeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCcc
Q 008840 191 NTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEY 269 (551)
Q Consensus 191 t~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~ 269 (551)
|||||||.++.++.|+++||+|+|||++++ +..+.+|+.+ ++|++|+|+||.++.+|++.+.. + ...++
T Consensus 130 T~WYH~H~~~~t~~q~~~Gl~G~liV~~~~-~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~~~-~--------~~~~~ 199 (534)
T 3abg_A 130 TLWYHDHAMHITAENAYRGQAGLYMLTDPA-EDALNLPSGYGEFDIPMILTSKQYTANGNLVTTN-G--------ELNSF 199 (534)
T ss_dssp EEEEEECCTTCHHHHHHTBCEEEEEEECTT-TTTSCTTCCHHHHSCCEEEEEECBCSSSCBCCCT-T--------CSSCC
T ss_pred eEEEecCccccchhhhhhcceEEEEEECCc-ccccCCCccCCcceEEEEEeeeeecCCCceeccC-C--------CCccc
Confidence 999999999999999999999999999877 6677788742 78999999999999998875431 1 12356
Q ss_pred CCceEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcC------CceEEEEEcCCCCCCCceEecEEEEccCceEEE
Q 008840 270 FGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTN------GLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADV 343 (551)
Q Consensus 270 ~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~------g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dV 343 (551)
.+|.++|||+.+|+++|++++|||||||+|+++.|.|+|.+ ||+|+||++||+++.+|+.+++|.|+|||||||
T Consensus 200 ~gd~~lvNG~~~p~~~v~~~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dv 279 (534)
T 3abg_A 200 WGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEV 279 (534)
T ss_dssp CCSEEEETTEESCBCBCCSSEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred cCceeccCCccCceEEecCcEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEE
Confidence 78999999999999999999999999999999999999953 399999999999887999999999999999999
Q ss_pred EEEcCCCCCceEEEecCCCCCCCCCC-CCCCCCCceEEEEEccCC-CCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc
Q 008840 344 VIDFSESTSDVAILANDAPYPYPAGN-PVNDANGKVMKFIILKNR-ETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT 421 (551)
Q Consensus 344 lv~~~~~~g~~~~L~~~~~~~~~~g~-~~~~~~~~vm~f~v~~~~-~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~ 421 (551)
+|++++.+|++|+|++........+. .....+..||+|++.... ..++..+|..|.+++... ......|.+.+...
T Consensus 280 lv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~~p~-~~~~~~~~~~~~~~- 357 (534)
T 3abg_A 280 VFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPS-PTTNTPRQFRFGRT- 357 (534)
T ss_dssp EEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCSCCC-CCCCCCEEEECSCC-
T ss_pred EEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCCCCC-CccccceEEEEecc-
Confidence 99999877778999985421111111 111234589999887643 234556888887655322 22234566655321
Q ss_pred cCCCCcceEEEcccccCCCCCC---Ccc--eeeeEEEEeee-eeeeeeccccCceeeeeeeeccCCc-cCCCCcCCCcCc
Q 008840 422 SNTGKPTHLLINAKTLEDPVTE---TPK--TLDQTELVNLE-EFKACMNKINDAIKCNLSKHACGKK-QAVPVHEQGWKN 494 (551)
Q Consensus 422 ~~~g~~~~~~INg~~f~~~~~~---~~~--~~~~~~l~n~~-~~~~~~~~~~~~~~~~v~~~~~G~~-~~~~~~e~~wkD 494 (551)
...|+|||+.|.+.... ..+ .+++|.+.|.+ .+.|+||+|+|.| .+....+|.. ..+.+.+.+|||
T Consensus 358 -----~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F--~Vl~~~~g~~~~~~~~~~~~~rD 430 (534)
T 3abg_A 358 -----GPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDF--KVISRTSGNNARTVMPYESGLKD 430 (534)
T ss_dssp -----CSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCE--EEEEESSCCSSSCCCSGGGSCBS
T ss_pred -----CceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeE--EEEEEcCCCCcCcCCccccCCcC
Confidence 12589999999754221 111 28899999987 4689999999954 6665434421 123334459999
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
||.|+||++++|+++|. +||| ||||||||+|||.|||+.|+|.
T Consensus 431 TV~v~pg~~v~I~~~~a-------------dnpG~w~~HCHil~H~d~GMm~~~~V~ 474 (534)
T 3abg_A 431 VVWLGRRETVVVEAHYA-------------PFPGVYMFHCHNLIHEDHDMMAAFNAT 474 (534)
T ss_dssp EECCCSSEEEEEEEECC-------------SCCEEEEEEESCHHHHHTTCEEEEEEC
T ss_pred eEEcCCCCEEEEEEEEC-------------CCCccEEEecChHHHHhcCCceEEEEE
Confidence 99999999999999865 2788 9999999999999999999986
No 6
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.4e-83 Score=691.21 Aligned_cols=439 Identities=22% Similarity=0.321 Sum_probs=352.8
Q ss_pred CcCCCCCCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCE
Q 008840 31 GLINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGID 110 (551)
Q Consensus 31 ~~~~~~~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~ 110 (551)
..+.+...=++..+|.+||.+.+....++. .++++.+.+.++++.++. .+.+|+|| |++||||||+++||+
T Consensus 21 ~~l~~~~~~p~~~~l~~~p~l~~~~~~~~~---~~~~L~~~~~~~~~~~G~-~~~~~~~N-----G~~PGPtIr~~~Gd~ 91 (481)
T 3zx1_A 21 LKLLDPKQFPQGEILKALPLLKNESKEKNI---FHATLEIKENHIELIKGK-KTLFYTYN-----GLVPAPKIEVFEGDK 91 (481)
T ss_dssp CCBCCGGGSCBSCBCCCCCBCCCCCCSTTE---EEEEEEEEEEEECCSTTC-CEEEEEET-----TBSSCCBEEEETTCE
T ss_pred ceeeccccCCCcCcCCCCCccCCcccCCCe---EEEEEEEEEEEEEccCCc-EEEEEEEC-----CCCCCceEEEECCcE
Confidence 345555555688999999999865444443 468888889999987776 78999998 999999999999999
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCcc-C
Q 008840 111 TYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQ-P 189 (551)
Q Consensus 111 v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~-~ 189 (551)
|+|+|+|+|++ +|+|||||+++++.+||+| ||+|.||++| +|+|++.++ +
T Consensus 92 v~v~v~N~l~~---------------------~tsiHwHGl~~~~~~DG~p-----q~~I~PG~s~---~Y~f~~~~~~~ 142 (481)
T 3zx1_A 92 LEILVKNKLKE---------------------ATTIHWHGVPVPPDQDGSP-----HDPILAGEER---IYRFEIPQDSA 142 (481)
T ss_dssp EEEEEEECSSS---------------------CBCCEEETCCCCGGGSCCT-----TSCBCTTCEE---EEEEECCTTCC
T ss_pred EEEEEEeCCCC---------------------CeeEEecCcccCCccCCCc-----cCcCCCCCeE---EEEEeCCCCCC
Confidence 99999999998 8999999999999999986 5789999999 999999754 7
Q ss_pred ceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCcc
Q 008840 190 GNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEY 269 (551)
Q Consensus 190 Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~ 269 (551)
||||||||.++.++.|+++||+|+|||++++ +..+.+|. ++ |+|+||+++.+|++... ....|..+.
T Consensus 143 GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~-~~~~~~~~----~~-l~l~D~~~~~~g~~~~~-------~~~~~~~g~ 209 (481)
T 3zx1_A 143 GTYWYHPHPHYTASKQVFMGLAGAFVIKAKK-DALSHLKE----KD-LMISDLRLDENAQIPNN-------NLNDWLNGR 209 (481)
T ss_dssp EEEEEECCCTTTHHHHHHTTCCEEEEEECSS-CTTTTSEE----EE-EEEEEECCBTTSCCCCC-------CHHHHHHCC
T ss_pred ceEEEeecCCCcchhhhhccceEEEEEcCcc-ccccCCCc----ee-EEEEEEeccCCCccccc-------cchhhccCC
Confidence 9999999999999999999999999999876 44444443 33 99999999998876411 001223356
Q ss_pred CCceEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCC
Q 008840 270 FGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSE 349 (551)
Q Consensus 270 ~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~ 349 (551)
.||.++|||+.+|.++|++++ ||||||+|+++.|.|+| +|+.|+||++||+++.+|+.+++|.|+|||||||+|++++
T Consensus 210 ~gd~~lvNG~~~p~l~v~~g~-RlRliNa~~~~~~~l~i-~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~ 287 (481)
T 3zx1_A 210 EGEFVLINGQFKPKIKLATNE-RIRIYNATAARYLNLRI-QGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK 287 (481)
T ss_dssp CCSEEEETTEESCEEEEETTE-EEEEEECCSSCCEEEEE-TTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS
T ss_pred cCCEEEECCccCceEEecCCC-EEEEEecCCCeEEEEEE-CCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC
Confidence 789999999999999999977 99999999999999999 5999999999999999999999999999999999999997
Q ss_pred CCCceEEEecCCCCCCCCCCC--CCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCC--
Q 008840 350 STSDVAILANDAPYPYPAGNP--VNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTG-- 425 (551)
Q Consensus 350 ~~g~~~~L~~~~~~~~~~g~~--~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g-- 425 (551)
+++|.|.+..... .|.. .......|++|++.+ ....+|..|.+++.++.+. ++|++.|.......+
T Consensus 288 --~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~----~~~~lP~~l~~~~~~~~~~--~~r~~~l~~~~~~~~~~ 357 (481)
T 3zx1_A 288 --DGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKK----ENVELPKNLKIFKPSEEPK--EFKEIIMSEDHMQMHGM 357 (481)
T ss_dssp --CEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEEC----CCCCCCSCSCCCCCCCCCC--EEEEEEEEECCSTTTTG
T ss_pred --CcEEEEEEecccc--cCccccCCCCceeEEEEecCC----CCccCCccccCCCCCCCCC--cEEEEEEeccchhcccc
Confidence 3589998754221 1111 112345789999876 2356898888877654443 678888764321111
Q ss_pred ----Cc-------ceEEEcccccCCCC-CCCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeec-cCCccCCCCcCC
Q 008840 426 ----KP-------THLLINAKTLEDPV-TETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHA-CGKKQAVPVHEQ 490 (551)
Q Consensus 426 ----~~-------~~~~INg~~f~~~~-~~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~-~G~~~~~~~~e~ 490 (551)
.. ..|+|||+.|++.. ...++ .+++|.+.|.+.+.|++|.|++.| ++.... +|. ++.++++
T Consensus 358 ~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F--~vl~~~~~g~--~~~~~~~ 433 (481)
T 3zx1_A 358 MGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQF--ELISSKLNGK--VQKAEFR 433 (481)
T ss_dssp GGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSSSCEEEEETTCCE--EEEEEEETTE--EEECSSC
T ss_pred cccccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCCCceeEEEeccEE--EEEEecccCC--CCCcccC
Confidence 01 24999999998532 12222 289999999999999999999954 555432 663 4446789
Q ss_pred CcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 491 GWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+|||||.|.||++++|+|+|+ +|| ||||||||+|||.|||++|+|.
T Consensus 434 ~~kDTv~v~Pg~~~~i~~~~d--------------~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 434 ALRDTINVRPNEELRLRMKQD--------------FKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp CEESEEEECTTCEEEEEECCC--------------SCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred cccceEEECCCCEEEEEEEcC--------------CCeeEEEEcCChHHHhcCCceEEEEe
Confidence 999999999999999999997 778 9999999999999999999996
No 7
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=8.1e-83 Score=685.77 Aligned_cols=429 Identities=20% Similarity=0.265 Sum_probs=344.4
Q ss_pred cccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCC
Q 008840 40 MFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHL 119 (551)
Q Consensus 40 ~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L 119 (551)
.|..+||+||++++. .+ .++++.+.+.++++.++. .+.+|+|| |++|||+||+++||+|+|+|+|+|
T Consensus 2 ~~~~~l~~p~~~~~~---~~----~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pGP~i~~~~Gd~v~v~~~N~l 68 (451)
T 2uxt_A 2 GQQQPLPVPPLLESR---RG----QPLFMTVQRAHWSFTPGT-RASVWGIN-----GRYLGPTIRVWKGDDVKLIYSNRL 68 (451)
T ss_dssp -CCCBCCCCCEECCS---SS----CCEEEEEEECCGGGCSSS-SSCCEEET-----TSSBCCEEEEETTCEEEEEEEECS
T ss_pred CCCccCCCCCcccCC---Cc----eEEEEEEEEEEEEcCCCc-eeEEEEEC-----CcccCceEEEeCCCEEEEEEEECC
Confidence 467889999999742 23 357777888888886665 78999998 999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCC
Q 008840 120 PPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTM 199 (551)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~ 199 (551)
++ +|+|||||+++++.+||+| ||+|.||++| +|+|++++++||||||||.+
T Consensus 69 ~~---------------------~tsiHwHG~~~~~~~DG~~-----~~~i~PG~~~---~Y~f~~~~~~GT~wYH~H~~ 119 (451)
T 2uxt_A 69 TE---------------------NVSMTVAGLQVPGPLMGGP-----ARMMSPNADW---APVLPIRQNAATLWYHANTP 119 (451)
T ss_dssp SS---------------------CBCEEEETCCCCGGGSCSG-----GGCBCTTCEE---CCEEECCSCSEEEEEEECCT
T ss_pred CC---------------------CccEEECCccCCCCCCCCC-----cCcCCCCCeE---EEEEEcCCCCcceEEecCCC
Confidence 97 8999999999999999987 6789999999 99999987799999999999
Q ss_pred CchhhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECC
Q 008840 200 GLTRVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNG 278 (551)
Q Consensus 200 g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG 278 (551)
+.++.|+++||+|+|||++++ +..+++|..+ ++|++|+|+||+++.++++.+...+ ..++.+|.++|||
T Consensus 120 ~~t~~q~~~Gl~G~liV~~~~-~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~~~~~---------~~~~~~d~~liNG 189 (451)
T 2uxt_A 120 NRTAQQVYNGLAGMWLVEDEV-SKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPG---------SGGFVGDTLLVNG 189 (451)
T ss_dssp TTHHHHHHTTCEEEEEEECHH-HHHSSSCCCBTTTEEEEEEEEEEECTTSCEECCCCS---------SSCCCCSEEEETT
T ss_pred CchhhhHhhcceEEEEEecCc-ccccCCCccCCCceEEEEEEeeecCCCCceeccccc---------CCCCcCCEEEECC
Confidence 999999999999999999765 4445567632 7899999999999999988653211 2356789999999
Q ss_pred cccCceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEe
Q 008840 279 KAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILA 358 (551)
Q Consensus 279 ~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~ 358 (551)
+.+|+++|++++|||||||+|+++.+.|+|.|||+|+||+.||+++.+|+.++++.|+|||||||+|++++ +++|+|+
T Consensus 190 ~~~p~~~v~~g~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~ 267 (451)
T 2uxt_A 190 VQSPYVEVSRGWVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSIT 267 (451)
T ss_dssp EESCEEEECSSEEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT--CCCEEEE
T ss_pred cccceEEecCCEEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC--CCEEEEE
Confidence 99999999988999999999999999999955999999999999998899999999999999999999996 3589999
Q ss_pred cCCCCCCCCC------CCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCcceEEE
Q 008840 359 NDAPYPYPAG------NPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLI 432 (551)
Q Consensus 359 ~~~~~~~~~g------~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~~I 432 (551)
+......... .........|+++++.+........+|..|.+++.++. ....+|++.|.. .|+|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p~~L~~~~~~~~-~~~~~~~~~l~~---------~~~i 337 (451)
T 2uxt_A 268 CGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAG-SPIRSRDISLGD---------DPGI 337 (451)
T ss_dssp C----------------CCCCSCCEEEEEEECSCCC----CCCSCSSSSCCCCC-CCSEEEEEEECS---------SSSB
T ss_pred ecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCccccCCCCCCCC-CCcceEEEEEee---------EEEE
Confidence 8653221100 01112345799999876443334568888888776544 445678887652 4899
Q ss_pred cccccCCCCC-CCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEE
Q 008840 433 NAKTLEDPVT-ETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVR 509 (551)
Q Consensus 433 Ng~~f~~~~~-~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~ 509 (551)
||++|+.+.. ...+ .+++|.+.|. ..|+||+|+|. |++.. .+| .++...++.|||||.| |++++|+|+
T Consensus 338 Ng~~f~~~~~~~~~~~G~~~~~~l~N~--~~HP~HLHGh~--F~Vl~-~~G--~~~~~~~p~~rDTv~v--g~~~~i~~~ 408 (451)
T 2uxt_A 338 NGQLWDVNRIDVTAQQGTWERWTVRAD--EPQAFHIEGVM--FQIRN-VNG--AMPFPEDRGWKDTVWV--DGQVELLVY 408 (451)
T ss_dssp TTBCCCTTCCCEEEETTCEEEEEEEEE--EEEEEEETTCE--EEEEE-ETT--BCCCGGGSSCBSEEEE--EEEEEEEEE
T ss_pred CCEeCCCCCCcEEcCCCCEEEEEEECC--CCcCeEECCce--EEEEe-eCC--cCCCcccCCCccEEEE--CCEEEEEEE
Confidence 9999986422 1122 2889999987 68999999994 46655 366 3445567899999999 899999999
Q ss_pred EeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 510 FSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 510 f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
|+. .+ .++| ||||||||+|||.|||++|+|..
T Consensus 409 ~dn--pg--------~~~g~w~~HCHil~H~d~GMm~~~~v~~ 441 (451)
T 2uxt_A 409 FGQ--PS--------WAHFPFYFNSQTLEMADRGSIGQLLVNP 441 (451)
T ss_dssp CCS--CC--------BTTBCEEEEESSHHHHHTTCEEEEEEEC
T ss_pred eCC--CC--------CCCCceEEeCCchhHHhCCCcEEEEEcc
Confidence 982 22 2456 99999999999999999999863
No 8
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.4e-78 Score=652.07 Aligned_cols=419 Identities=25% Similarity=0.341 Sum_probs=323.7
Q ss_pred CCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCC-CCCcEEEEECCCEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTAS-VPGPTIEALHGIDTYVTW 115 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~-~PGPti~v~~Gd~v~v~l 115 (551)
++.+..++||+||.+++ + .+++|++ |+|| |+ +||||||+++||+|+|++
T Consensus 3 ~~~~~~~~l~~p~~~~~-----~----~~~~l~~----------------~~~N-----g~~~pGP~i~~~~Gd~v~v~~ 52 (448)
T 3aw5_A 3 EVKRPETSAPVPPLIKE-----A----TYIEATA----------------SGYM-----AEGVLNPTIILRRGQRVDMTL 52 (448)
T ss_dssp --------CCCCCEESC-----C----SEEEEET----------------TEEE-----ETTEESCEEEEETTCEEEEEE
T ss_pred ccccCCCCCCCCcccCC-----C----cEEEEEE----------------EEEC-----CccccCceEEEeCCCEEEEEE
Confidence 46677899999999974 1 2455543 9998 99 999999999999999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEe
Q 008840 116 QNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYH 195 (551)
Q Consensus 116 ~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH 195 (551)
+|+|++ +|+|||||+++++.+||+|+ |+|.||++| +|+|++.|++||||||
T Consensus 53 ~N~l~~---------------------~tsiHwHG~~~~~~~DG~~~-----~~i~PG~~~---~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 53 KNKLTE---------------------PTIVHWHGFDVNWHNDAHPS-----FAITPGESY---NYSFDVVNRAGTYLYH 103 (448)
T ss_dssp EECSSS---------------------CBCEEEETCCCCHHHHTCGG-----GCBCTTCEE---EEEEECCSCSEEEEEE
T ss_pred EECCCC---------------------ceeEEeCCccCCCccCCCCC-----ccCCCCCEE---EEEEEcCCCCCceEec
Confidence 999997 89999999999988999987 689999999 9999998899999999
Q ss_pred ccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEE
Q 008840 196 DHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIV 275 (551)
Q Consensus 196 ~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~l 275 (551)
||.|+.++.|+++||+|+|||++++ +. +.+|.+ .+|++|+|+||+++. +++.+ ..+.. ....++.++.++
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~-~~-~~l~~d-~~e~~l~l~D~~~~~-~~~~~-~~~~~-----~~~~~~~~~~~l 173 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSG-SD-LGFKYG-VNDLPLVISDRRFIG-GAPVY-NPTPM-----EMIAGFLGNAVL 173 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTT-TT-TTCCBT-TTEEEEEEEEEEEET-TEEEC-CCCHH-----HHHHCCCCSEEE
T ss_pred cCCCCchHHHHhccceEEEEEeCCc-cc-cCCCCC-CceEEEEEEeeccCC-Ccccc-ccccc-----ccccCccccEEE
Confidence 9999999999999999999999776 33 556653 489999999999998 88754 11000 011245689999
Q ss_pred ECCcccCceeecCeEEEEEEEecCCCceEEEEE--cC--CceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCC
Q 008840 276 VNGKAWPRMTVRRRKYRFRIINASNARFFRFFF--TN--GLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSEST 351 (551)
Q Consensus 276 VNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l--~~--g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~ 351 (551)
|||+.+|.++|++++|||||||+|+.+.+.|+| .+ ||+|+||++||+++++|+.++++.|+|||||||+|++++
T Consensus 174 iNG~~~p~~~v~~g~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-- 251 (448)
T 3aw5_A 174 VNGVKDAVFKLSGGSYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE-- 251 (448)
T ss_dssp ETTEETCEEEEEEEEEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECS--
T ss_pred ECCcccceEEECCCeEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECCC--
Confidence 999999999999889999999999999999999 73 299999999999996699999999999999999999983
Q ss_pred CceEEEecCCCCCCCCC---C----CCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCC
Q 008840 352 SDVAILANDAPYPYPAG---N----PVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNT 424 (551)
Q Consensus 352 g~~~~L~~~~~~~~~~g---~----~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~ 424 (551)
+.|+|++........+ . ........++.|++.+..... . |..|.++++.+. ....+|++.|...
T Consensus 252 -~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--p~~L~~lp~~~~-~~~~~~~~~l~~~---- 322 (448)
T 3aw5_A 252 -GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAV-P--VEALSDPPPEPP-KPTRTRRFALSLS---- 322 (448)
T ss_dssp -EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCC-C--CCCCSCCCCCCC-CCSEEEEEEEEEE----
T ss_pred -CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCC-C--ccccCCCCCCCC-CCCceEEEEEeCC----
Confidence 3799998653221111 0 011123468899986643221 1 566665554333 3345688877642
Q ss_pred CCcceEEEcccccCCCCC-CC-cc--eeeeEEEEeee-eeeeeeccccCceeeeeeeeccCCcc----------CCCCcC
Q 008840 425 GKPTHLLINAKTLEDPVT-ET-PK--TLDQTELVNLE-EFKACMNKINDAIKCNLSKHACGKKQ----------AVPVHE 489 (551)
Q Consensus 425 g~~~~~~INg~~f~~~~~-~~-~~--~~~~~~l~n~~-~~~~~~~~~~~~~~~~v~~~~~G~~~----------~~~~~e 489 (551)
...|+|||++|+.... .. .+ .+++|.+.|.+ .+.|+||+|+|.| ++... +|... ...+.+
T Consensus 323 --~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F--~Vl~~-~G~~~~~~~~~~~~~~~~p~~ 397 (448)
T 3aw5_A 323 --GMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPM--WIIER-KDSPRQVAELAVDNRGRLPTD 397 (448)
T ss_dssp --TTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCB--EEEEE-ESCCHHHHTTCCSTTCCCGGG
T ss_pred --CceeeECCCcCCCCCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceE--EEEEe-cCCCcccccccccccCCCccc
Confidence 1259999999986422 22 22 38899999998 8899999999955 55543 45321 013456
Q ss_pred CCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCceEEeeccccccccCcccceEEc
Q 008840 490 QGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 490 ~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg~~~HCHiL~HED~GMM~~~~V~ 550 (551)
++|||||.|+||++++|++||+.+. ++|| ||||||||+|||.|||++|+|.
T Consensus 398 ~~~rDTv~v~pg~~~~i~vrF~~~~---------adnp-w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 398 LGLKDTVLIWPGETVKIVVNFDAKK---------RGQL-FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp GSCBSEEEECTTCEEEEEEEECGGG---------TTCE-EEEEESSHHHHHTTCEEEEEEC
T ss_pred cCCccEEEeCCCCEEEEEEEecccC---------CCCc-EEEEcCChHHHhCCCceEEEeC
Confidence 7899999999999999999997211 2478 9999999999999999999984
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=8.7e-78 Score=645.36 Aligned_cols=421 Identities=25% Similarity=0.428 Sum_probs=328.3
Q ss_pred ccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCC
Q 008840 43 DELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPN 122 (551)
Q Consensus 43 ~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~ 122 (551)
++|++||+++ +.+|. .++++.+.+.++++. +. .+.+|+|| |++|||+||+++||+|+|+++|+|+.
T Consensus 2 ~~l~~p~~~~---~~~~~---~~~~l~~~~~~~~~~-g~-~~~~~~~n-----g~~pGP~i~~~~Gd~v~v~~~N~l~~- 67 (439)
T 2xu9_A 2 PSFPEPKVVR---SQGGL---LSLKLSATPTPLAIA-GQ-RATLLTYG-----GSFPGPTLRVRPRDTVRLTLENRLPE- 67 (439)
T ss_dssp CSSCCCCEEE---CBTTE---EEEEEEEEEEEEEET-TE-EEEEEEET-----TBSSCCEEEECTTCEEEEEEEECSSS-
T ss_pred CCCCCCceec---cCCCe---EEEEEEEEEEEEEcC-Cc-eEEEEEEC-----CcccCCEEEEeCCCEEEEEEEECCCC-
Confidence 6899999996 34554 467777778877775 43 68899998 99999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcC-ccCceeEEeccCCCc
Q 008840 123 HILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNM-QQPGNTWYHDHTMGL 201 (551)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~-~~~Gt~wYH~H~~g~ 201 (551)
+|+|||||+++++.+||++. .|.||++| +|+|++. +++||||||||.++.
T Consensus 68 --------------------~tsiHwHG~~~~~~~DG~~~------~I~PG~~~---~Y~f~~~~~~~GT~wYH~H~~~~ 118 (439)
T 2xu9_A 68 --------------------PTNLHWHGLPISPKVDDPFL------EIPPGESW---TYEFTVPKELAGTFWYHPHLHGR 118 (439)
T ss_dssp --------------------CBCCEEETCCCCTTTSCTTC------CBCTTCEE---EEEEECCSSCCEEEEEECCCTTS
T ss_pred --------------------CcceEeCCCCCCccccCCcc------cCCCCCeE---EEEEecCCCCCcceEeccCCCCc
Confidence 89999999999999999752 38999999 9999974 389999999999999
Q ss_pred hhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc
Q 008840 202 TRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW 281 (551)
Q Consensus 202 t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~ 281 (551)
++.|+++||+|+|||++++ +..-.+ . .++|++|+|+||+++.+ .+. ... ...+..+..+++++|||+.+
T Consensus 119 t~~q~~~Gl~G~liV~~~~-~~~~~~-~-~~~e~~l~l~D~~~~~~-~~~-~~~------~~~~~~g~~~~~~~iNG~~~ 187 (439)
T 2xu9_A 119 VAPQLFAGLLGALVVESSL-DAIPEL-R-EAEEHLLVLKDLALQGG-RPA-PHT------PMDWMNGKEGDLVLVNGALR 187 (439)
T ss_dssp HHHHHHTTCCEEEEECCGG-GGSHHH-H-TSEEEEEEEEEECEETT-EEC-CCC------HHHHHHCCCCSEEEETTEES
T ss_pred hHHHHHhhCeEEEEEcCcc-ccCccC-C-CCCcEEEEEEeeeeCCC-CcC-CCC------ccccccCCCCCEEEECCccC
Confidence 9999999999999999754 211001 2 27899999999998864 221 000 00111234589999999999
Q ss_pred CceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 282 PRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 282 P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|.++|++++|||||||+|+++.+.|+| +||+|+||+.||+++.+|+.++++.|+|||||||+|++++ +| +|+|++..
T Consensus 188 p~l~v~~g~~RlRliN~~~~~~~~~~i-~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~ 264 (439)
T 2xu9_A 188 PTLVAQKATLRLRLLNASNARYYRLAL-QDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALP 264 (439)
T ss_dssp CEEECSSSEEEEEEEECCSSCCEEEEE-TTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEEC
T ss_pred CcEEecCCeEEEEEEecCCCceEEEEE-CCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecc
Confidence 999998889999999999999999999 6999999999999988899999999999999999999998 44 79998753
Q ss_pred CCCCCC---CC--------CCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCcceE
Q 008840 362 PYPYPA---GN--------PVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHL 430 (551)
Q Consensus 362 ~~~~~~---g~--------~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~ 430 (551)
...... |. ........++.|++.+.. .+..+|..|.+++.++.+. ..|++.|.... . ...|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~p~~l~~~~~l~~~~--~~r~~~l~~~~--~--g~~~ 336 (439)
T 2xu9_A 265 YDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP--KPLPLPKALSPFPTLPAPV--VTRRLVLTEDM--M--AARF 336 (439)
T ss_dssp CCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC--CCCCCCSCCCCCCCCCCCS--EEEEEEEEEEG--G--GTEE
T ss_pred cccCCccccccccccccccCCCCCcceeEEEEecCCC--ccccCcccCCCcccCCCCC--cceEEEEEeec--c--CceE
Confidence 211000 00 001123468889987654 2345787776665543322 24677665322 1 2369
Q ss_pred EEcccccCCCCC-CCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEE
Q 008840 431 LINAKTLEDPVT-ETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRIL 507 (551)
Q Consensus 431 ~INg~~f~~~~~-~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~ 507 (551)
+|||++|+.+.. ...+ .+++|.+.|.+.+.|+||+|+|.| ++.. .+|. + ..++.|||||.|+|+++++|+
T Consensus 337 ~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F--~Vl~-~~g~--~--~~~p~~rDTv~v~p~~~v~i~ 409 (439)
T 2xu9_A 337 FINGQVFDHRRVDLKGQAQTVEVWEVENQGDMDHPFHLHVHPF--QVLS-VGGR--P--FPYRAWKDVVNLKAGEVARLL 409 (439)
T ss_dssp EETTBCCCTTCCCEEECTTCEEEEEEEECSSSCEEEEESSCCB--EEEE-ETTE--E--CSSCCCBSEEEECTTCEEEEE
T ss_pred eECCEECCCCCCceecCCCCEEEEEEEcCCCCCCCceeCCCcE--EEEe-eCCC--C--CCCCCCeEEEEeCCCCEEEEE
Confidence 999999986432 1111 288999999999999999999954 5655 3442 1 235789999999999999998
Q ss_pred EEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 508 VRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 508 ~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
++++ ||| ||||||||+|||.|||+.|+|
T Consensus 410 f~ad--------------npG~w~~HCHil~H~~~GMm~~~~V 438 (439)
T 2xu9_A 410 VPLR--------------EKGRTVFHCHIVEHEDRGMMGVLEV 438 (439)
T ss_dssp EECC--------------SCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred EEcC--------------CCCCEEEECCcchhhhcCCcEEEEe
Confidence 8865 789 999999999999999999998
No 10
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=9.6e-73 Score=617.78 Aligned_cols=413 Identities=15% Similarity=0.210 Sum_probs=294.9
Q ss_pred eEEEEEEEEEEeecCCCC-CccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 65 KLEIGMFEKKWKFHRDLP-PTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~-~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
++++.+.+.+ +.++.. .+.+|+|| |++||||||+++||+|+|+++|+|+..+ ...+
T Consensus 25 ~~~l~i~~~~--~~~dg~~~~~~~~~N-----G~~PGP~i~~~~Gd~v~v~v~N~l~~~~----------------~~~~ 81 (521)
T 1v10_A 25 ALDLHILNAN--LDPDGTGARSAVTAE-----GTTIAPLITGNIDDRFQINVIDQLTDAN----------------MRRA 81 (521)
T ss_dssp EEEEEEEEEE--ECTTSSCCEEEEEES-----SSSSCCCEEEETTCEEEEEEEECCCCTT----------------SCCC
T ss_pred eEEEEEEEEE--EcCCCcceEEEEEEC-----CccCCCcEEEeCCCEEEEEEEECCCCcc----------------CCCC
Confidence 3455555554 445554 78999998 9999999999999999999999998310 0128
Q ss_pred eEEeeCCCCCC--CCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCC
Q 008840 144 TVVHLHGGIDE--PESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDV 221 (551)
Q Consensus 144 t~iH~HG~~~~--~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~ 221 (551)
|+|||||+++. +.+||+|+ ++||+|.||++| +|+|++.+++||||||||.+ .|+++||+|+|||++++
T Consensus 82 tsiHwHGl~~~~~~~~DGv~~--vtq~~I~PG~s~---~Y~f~~~~~~GT~wYH~H~~----~q~~~Gl~G~liV~~~~- 151 (521)
T 1v10_A 82 TSIHWHGFFQAGTTEMDGPAF--VNQCPIIPNESF---VYDFVVPGQAGTYWYHSHLS----TQYCDGLRGAFVVYDPN- 151 (521)
T ss_dssp BCEEEETCCCTTCGGGSCCBT--TTBCCBCTTEEE---EEEEECTTCCEEEEEEECST----TGGGGTCEEEEEEECTT-
T ss_pred ceEecCCeeccCCCccCCCcc--eeeCCcCCCCeE---EEEEecCCCCccEEEEeccC----CchhcCceEEEEEcCCc-
Confidence 99999999995 45999998 899999999999 99999767999999999985 49999999999999765
Q ss_pred CCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc----------CceeecC-e
Q 008840 222 EAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW----------PRMTVRR-R 289 (551)
Q Consensus 222 ~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~----------P~~~v~~-~ 289 (551)
+ +...+... ++|++|+|+||+++.++++.+...+. ...+|.++|||+.+ |.++|++ +
T Consensus 152 ~-~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~~~~~----------~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~ 220 (521)
T 1v10_A 152 D-PHLSLYDVDDASTVITIADWYHSLSTVLFPNPNKA----------PPAPDTTLINGLGRNSANPSAGQLAVVSVQSGK 220 (521)
T ss_dssp C-TTGGGCSBCSGGGEEEEEEECSSCCC-------CC----------CSCCSEEEETTBCCCSSCGGGSCCCEEEECTTC
T ss_pred c-cccccCCCCCceeEEEEcccccCCHHHHhhccCCC----------CCCCCEEEECCcccCCCCCCCCCceEEEECCCC
Confidence 2 22111221 35899999999999888875421111 23478999999987 8999998 8
Q ss_pred EEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCC
Q 008840 290 KYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGN 369 (551)
Q Consensus 290 ~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~ 369 (551)
+|||||||+|+.+.+.|+| +||+|+||+.||+++ +|+.+++|.|+|||||||+|++++.+| +|+|++...... .+
T Consensus 221 ~~RlRliNa~~~~~~~~~i-~gh~~~vi~~DG~~~-~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~-~~- 295 (521)
T 1v10_A 221 RYRFRIVSTSCFPNYAFSI-DGHRMTVIEVDGVSH-QPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGR-NG- 295 (521)
T ss_dssp EEEEEEEECCSSCCEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSS-CS-
T ss_pred EEEEEEEecCCcccEEEEE-CCCeEEEEecCCccc-cceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccc-cc-
Confidence 9999999999999999999 699999999999998 899999999999999999999988654 899987532110 00
Q ss_pred CCCCCCCceEEEEEccCCCCCCCC-------CC-CCCCCCCCCCCcc----CceeeEEeeeecccCCCCcceEEEccccc
Q 008840 370 PVNDANGKVMKFIILKNRETDPWR-------VP-EKLIEYPSADLSA----ASTTRYIAMYEYTSNTGKPTHLLINAKTL 437 (551)
Q Consensus 370 ~~~~~~~~vm~f~v~~~~~~~~~~-------lP-~~L~~~~~~~~~~----~~~~r~~~l~~~~~~~g~~~~~~INg~~f 437 (551)
........++ ++.+....++.. ++ ..|.++...+.+. ..+.+.+.+... ..+....|+|||++|
T Consensus 296 ~~~~~~~ail--~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~--~~~~~~~~~iNg~~~ 371 (521)
T 1v10_A 296 FTGGINSAIF--RYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADINLNLRIG--RNATTADFTINGAPF 371 (521)
T ss_dssp CGGGTTEEEE--EETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEE--CCSSSSCCEESSCCC
T ss_pred CCCCceeEEE--EECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceEEEEEEEe--cCCceeEEEECCCcc
Confidence 0001112344 444322111111 11 1244432211111 123344443321 122223699999999
Q ss_pred CCCCCC------------------Cc----c--eeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcC
Q 008840 438 EDPVTE------------------TP----K--TLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWK 493 (551)
Q Consensus 438 ~~~~~~------------------~~----~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wk 493 (551)
..+... .. + .+.++.+.| .+.|+||+|+|. |.+... +|. ......++.||
T Consensus 372 ~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~--F~Vl~~-~~~-~~~n~~~p~~r 445 (521)
T 1v10_A 372 IPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHN--FDVVRT-PGS-SVYNYVNPVRR 445 (521)
T ss_dssp CCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCC--EEEEEC-TTC-SCCCCSSCCEE
T ss_pred cCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccce--EEEEec-CCC-CccccCCCCee
Confidence 864321 00 0 033344566 778999999995 456553 332 22234567999
Q ss_pred ccEEe-CCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 494 NVYKI-TPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 494 DTV~v-~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
|||.| +||++++|+|+++ ||| |||||||++|||.|||.+|.|-
T Consensus 446 DTV~V~p~gg~v~Irf~aD--------------NPG~W~~HCHi~~H~~~GM~~~~~v~ 490 (521)
T 1v10_A 446 DVVSIGGGGDNVTFRFVTD--------------NPGPWFLHCHIDWHLEAGLAVVFAED 490 (521)
T ss_dssp SEEECCBSSCEEEEEEECC--------------SCEEEEEEESCHHHHTTTCEEEEEES
T ss_pred eeEEeCCCCcEEEEEEEeC--------------CCeeEEEeeChHHHHhCCCeEEEEEC
Confidence 99999 8999999988876 889 9999999999999999999873
No 11
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-72 Score=618.05 Aligned_cols=417 Identities=17% Similarity=0.156 Sum_probs=306.4
Q ss_pred eEEEEEEEEEEeecCCC-CCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCC-CCCCCCCCCCCCCCCCCCCCCC
Q 008840 65 KLEIGMFEKKWKFHRDL-PPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLP-PNHILPIDPTIPTAMPSNKKGV 142 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~-~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~-~~~~~~~~~~~~~~~~~~~~~~ 142 (551)
++++.+... .+.++. ..+.+|+|| |++|||+||+++||+|+|+++|+|+ +
T Consensus 4 ~~~~~v~~~--~~~pdG~~~~~~~~~N-----g~~PGP~i~~~~Gd~v~v~v~N~l~~~--------------------- 55 (534)
T 1zpu_A 4 TFNWTTGWD--YRNVDGLKSRPVITCN-----GQFPWPDITVNKGDRVQIYLTNGMNNT--------------------- 55 (534)
T ss_dssp EEEEEEEEE--EECSSSSCCEEEEEET-----TBSSCCCEEEETTCEEEEEEECCCSSC---------------------
T ss_pred EEEEEEEEE--EecCCCCceEEEEEEC-----CccCCccEEEECCCEEEEEEEeCCCCC---------------------
Confidence 556655554 456666 689999998 9999999999999999999999998 5
Q ss_pred CeEEeeCCCCCCC--CCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 143 PTVVHLHGGIDEP--ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 143 ~t~iH~HG~~~~~--~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|+|||||+++.. .+||+|+ ++||+|.||++| +|+|++++++||||||||.++ |+++||+|+|||++++
T Consensus 56 ~tsiHwHG~~~~~~~~~DG~~~--vtq~pI~PG~~~---~Y~f~~~~~~GT~wYH~H~~~----q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 56 NTSMHFHGLFQNGTASMDGVPF--LTQCPIAPGSTM---LYNFTVDYNVGTYWYHSHTDG----QYEDGMKGLFIIKDDS 126 (534)
T ss_dssp CBCCEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECSSCCEEEEEECCSSS----GGGGTCEEEEEEECTT
T ss_pred CeeEEcCCcccCCCCcccCCCc--cccCCcCCCCeE---EEEEEeCccceeEEEEEcCcc----cccCcceeeEEeCCCC
Confidence 8999999999864 5999998 899999999999 999999889999999999963 8999999999999765
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCC-CCCCCCCCCCCccCCceEEECCcccCceeecC-eEEEEEEEec
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTG-NNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-RKYRFRIINA 298 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g-~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~-~~~RlRllNa 298 (551)
+ ++ .+++|++|+|+||+++.++++...... .++. ..+..++.++|||+.+|.++|++ ++|||||||+
T Consensus 127 -~-p~----~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~-----g~~~~~d~~liNG~~~~~~~v~~g~~~RlRliNa 195 (534)
T 1zpu_A 127 -F-PY----DYDEELSLSLSEWYHDLVTDLTKSFMSVYNPT-----GAEPIPQNLIVNNTMNLTWEVQPDTTYLLRIVNV 195 (534)
T ss_dssp -C-CS----CCSEEEEEEEEEECSSCHHHHHHHHSSTTCTT-----CCCCCCSEEEETTBSSCEEECCSSCEEEEEEEEC
T ss_pred -C-CC----CCcceEEEEeeccccCCHHHHHHHHhccccCC-----CCCCCCceEEECCCCceEEEEECCCEEEEEEEec
Confidence 2 22 247899999999988877665322110 0000 11345899999999999999998 7999999999
Q ss_pred CCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCce
Q 008840 299 SNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKV 378 (551)
Q Consensus 299 s~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~v 378 (551)
|+.+.+.|+| +||+|+||++||+++ +|+.++.|.|+|||||||+|++++.++++|+|++..........+........
T Consensus 196 ~~~~~~~~~i-~gh~~~vi~~DG~~~-~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ 273 (534)
T 1zpu_A 196 GGFVSQYFWI-EDHEMTVVEIDGITT-EKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNAT 273 (534)
T ss_dssp CSSCCEEEEE-TTBCEEEEEETTEEE-EEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEE
T ss_pred cCCceEEEEE-cCCeeEEEeccCcCc-cccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceE
Confidence 9999999999 699999999999999 89999999999999999999999766568999875422100000111111122
Q ss_pred EEEEEccCCC-CCC---CCCCC-----CCCCCCCCCC-ccCceeeEEeeeecccC-CCCcceEEEcccccCCCCCC----
Q 008840 379 MKFIILKNRE-TDP---WRVPE-----KLIEYPSADL-SAASTTRYIAMYEYTSN-TGKPTHLLINAKTLEDPVTE---- 443 (551)
Q Consensus 379 m~f~v~~~~~-~~~---~~lP~-----~L~~~~~~~~-~~~~~~r~~~l~~~~~~-~g~~~~~~INg~~f~~~~~~---- 443 (551)
..+++.+... ..+ ..++. .|.|++..+. ..+ .|++.|...... ......|+|||++|..+...
T Consensus 274 ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~ 351 (534)
T 1zpu_A 274 SYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEP--DHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMT 351 (534)
T ss_dssp EEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSC--SEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHH
T ss_pred EEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCC--CeEEEEEEEeeccCCceeEEEECCCcccCCCCCceee
Confidence 3344433221 011 11221 2333332222 223 344444322111 11234689999999764220
Q ss_pred -----------------C-c-----ceeeeEEEEeeeeeeeeeccccCceeeeeeeecc-------CCccC-------CC
Q 008840 444 -----------------T-P-----KTLDQTELVNLEEFKACMNKINDAIKCNLSKHAC-------GKKQA-------VP 486 (551)
Q Consensus 444 -----------------~-~-----~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~-------G~~~~-------~~ 486 (551)
+ + ..+++|.|.|.+.+.|+||+|+|.| .+..... |.+.. ..
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F--~Vl~~~~~~~~~~~G~p~~~~~~~~~~~ 429 (534)
T 1zpu_A 352 VLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAF--QTIQRDRTYDDALGEVPHSFDPDNHPAF 429 (534)
T ss_dssp HTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCE--EEEEECCCCCGGGTCCCCCCBTTBCCCC
T ss_pred ecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCce--EEEeecCCccccccCcccccCccccccc
Confidence 0 0 1278899999988999999999955 5554322 21000 11
Q ss_pred CcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 487 VHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 487 ~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
..++.|||||.|+|+++++|+|+++ ||| |||||||++|+|.|||.+|.+
T Consensus 430 ~~~p~~RDTv~V~pgg~v~IrF~aD--------------NPG~W~~HCHi~~H~~~GM~~~~~~ 479 (534)
T 1zpu_A 430 PEYPMRRDTLYVRPQSNFVIRFKAD--------------NPGVWFFHCHIEWHLLQGLGLVLVE 479 (534)
T ss_dssp CSSCEEESEEEECTTCEEEEEEECC--------------SCEEEEEEECCHHHHHTTCEEEEEE
T ss_pred cCCCCeeeEEEeCCCCEEEEEEEeC--------------CCeeEEEEeCchhHhhcCCeEEEEE
Confidence 2357899999999999999988876 889 999999999999999999976
No 12
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=6e-72 Score=609.34 Aligned_cols=411 Identities=17% Similarity=0.204 Sum_probs=295.2
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.+.. +.++...+.+|+|| |++ |||||+++||+|+|+++|+|+.. ....+|
T Consensus 6 ~~~l~i~~~~--~~~~g~~~~~~~~N-----G~~-GP~i~~~~Gd~v~v~v~N~l~~~----------------~~~~~t 61 (503)
T 1hfu_A 6 VDTMTLTNAN--VSPDGFTRAGILVN-----GVH-GPLIRGGKNDNFELNVVNDLDNP----------------TMLRPT 61 (503)
T ss_dssp EEEEEEEEEE--ECTTSCCEEEEEET-----TBS-SCEEEEETTCCEEEEEEECCCCT----------------TSCCSB
T ss_pred eEEEEEEEEE--ECCCCeEEEEEEEC-----Ccc-CCcEEEeCCCEEEEEEEeCCCCc----------------cCCCcc
Confidence 4566665654 44555578999998 999 99999999999999999999831 001289
Q ss_pred EEeeCCCCCC--CCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDE--PESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~--~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++. +.+||+|+ ++||+|.||++| +|+|++.+++||||||||.+ .|+++||+|+|||++++ +
T Consensus 62 siHwHG~~~~~~~~~DGv~~--vtq~~I~PG~~~---~Y~f~~~~~~GT~wYH~H~~----~q~~~Gl~G~liV~~~~-~ 131 (503)
T 1hfu_A 62 SIHWHGLFQRGTNWADGADG--VNQCPISPGHAF---LYKFTPAGHAGTFWYHSHFG----TQYCDGLRGPMVIYDDN-D 131 (503)
T ss_dssp CEEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEECCTTCCEEEEEEECST----TGGGGTCEEEEEEECTT-C
T ss_pred cEeccceeccCCCccCCCcc--cccCCcCCCCeE---EEEEEeCCCCccEEEEecch----hhhhCcceeeEEEcCCC-C
Confidence 9999999994 45999998 799999999999 99999667999999999985 49999999999999765 2
Q ss_pred CCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---------CceeecC-eEE
Q 008840 223 APLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---------PRMTVRR-RKY 291 (551)
Q Consensus 223 ~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---------P~~~v~~-~~~ 291 (551)
+...+.+. ++|++|+|+||+++.++++.. . ..+|.++|||+.+ |.++|++ ++|
T Consensus 132 -~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~----~-----------~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~ 195 (503)
T 1hfu_A 132 -PHAALYDEDDENTIITLADWYHIPAPSIQG----A-----------AQPDATLINGKGRYVGGPAAELSIVNVEQGKKY 195 (503)
T ss_dssp -TTGGGCSBCSTTSEEEEEEECSSCGGGCC------------------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEE
T ss_pred -CcccCCCCCCceEEEEEcccccCChHHhcC----C-----------CCCCEEEECcccccCCCCCCcceEEEEcCCCEE
Confidence 22222221 358999999999887776420 0 2378999999987 8999998 799
Q ss_pred EEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCC--C
Q 008840 292 RFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAG--N 369 (551)
Q Consensus 292 RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g--~ 369 (551)
||||||+|+.+.+.|+| +||+|+||+.||+++ +|+.+++|.|+|||||||+|++++.+| +|+|++......... .
T Consensus 196 RlRliN~~~~~~~~~~i-~gh~~~vi~~DG~~~-~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~ 272 (503)
T 1hfu_A 196 RMRLISLSCDPNWQFSI-DGHELTIIEVDGELT-EPHTVDRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGT 272 (503)
T ss_dssp EEEEEECCSSCCEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGC
T ss_pred EEEEEecCCcccEEEEE-cCceEEEEeccCccc-cccccCeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccc
Confidence 99999999999999999 699999999999998 899999999999999999999998654 799987532110000 0
Q ss_pred CCCCCCCceEEEEEccCCCCCCCCCCC-------CCCCCCCCCCcc----CceeeEEeeeecccCCCCcceEEEcccccC
Q 008840 370 PVNDANGKVMKFIILKNRETDPWRVPE-------KLIEYPSADLSA----ASTTRYIAMYEYTSNTGKPTHLLINAKTLE 438 (551)
Q Consensus 370 ~~~~~~~~vm~f~v~~~~~~~~~~lP~-------~L~~~~~~~~~~----~~~~r~~~l~~~~~~~g~~~~~~INg~~f~ 438 (551)
........+|++.............|. .|.++...+.+. ..+.+.+.+.... .+ ..|+|||++|.
T Consensus 273 ~~~~~~~ail~y~~~~~~~p~~~~~~~~~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--~~--~~~~iNg~~~~ 348 (503)
T 1hfu_A 273 FANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGF--SG--GRFTINGTAYE 348 (503)
T ss_dssp CGGGTTEEEEEETTSCSSCCCCCCCSSCCBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEE--ET--TEEEETTBCCC
T ss_pred cCCCceEEEEEECCCCCCCCCCCCCCccCCCccccccccCccCCCCcccCCcceEEEEEEeec--cC--ceEEECCCccC
Confidence 011112245444322111111111221 233432211111 1223344332111 11 26999999998
Q ss_pred CCCCC------------------C-----cc-eeeeEEEE-eeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcC
Q 008840 439 DPVTE------------------T-----PK-TLDQTELV-NLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWK 493 (551)
Q Consensus 439 ~~~~~------------------~-----~~-~~~~~~l~-n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wk 493 (551)
.+... . +. .+.++.+. |...+.|+||+|+|.| .+... +|. ......++.||
T Consensus 349 ~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F--~Vl~~-~~~-~~~n~~~p~~r 424 (503)
T 1hfu_A 349 SPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAF--SVVRS-AGS-STYNFVNPVKR 424 (503)
T ss_dssp CCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCE--EEEEC-TTC-CCCCCSSBCEE
T ss_pred CCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceE--EEEec-CCC-CccccCCCCee
Confidence 65321 0 00 02233344 4456789999999954 56553 332 22234578999
Q ss_pred ccEEe-CCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 494 NVYKI-TPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 494 DTV~v-~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
|||.| +||++++|+|+++ ||| ||||||||+|||.|||.+|.|.
T Consensus 425 DTV~V~ppg~~v~irf~ad--------------nPG~W~~HCHil~H~~~GM~~~~~v~ 469 (503)
T 1hfu_A 425 DVVSLGVTGDEVTIRFVTD--------------NPGPWFFHCHIEFHLMNGLAIVFAED 469 (503)
T ss_dssp SEEECCSTTCEEEEEEECC--------------SCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred eeEEecCCCceEEEEEEcC--------------CCeeeeEecCchhHhhCCCeEEEEEC
Confidence 99999 8999999988876 889 9999999999999999999873
No 13
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=7.3e-71 Score=607.33 Aligned_cols=411 Identities=18% Similarity=0.180 Sum_probs=298.0
Q ss_pred eeEEEEEEEEEEeecCCCCC-ccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPP-TPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGV 142 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~-~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~ 142 (551)
.++++.+.+.+.++.++.-. +.+|+|| |++||||||+++||+|+|+|+|+|+..
T Consensus 34 ~~~~l~~~~~~~~~~~~g~~~~~~~~~N-----g~~PGP~i~~~~GD~v~v~v~N~l~~~-------------------- 88 (559)
T 2q9o_A 34 QSYVFNLTEVDNWMGPDGVVKEKVMLIN-----GNIMGPNIVANWGDTVEVTVINNLVTN-------------------- 88 (559)
T ss_dssp EEEEEEEEEEEEEECTTSCEEEEEEEET-----TBSSCCCEEEETTCEEEEEEEEECSSC--------------------
T ss_pred EEEEEEEEEeEeeECCCCccceEEEEEC-----CcccCCcEEEeCCCEEEEEEEeCCCCC--------------------
Confidence 35777777877666655445 7899998 999999999999999999999999532
Q ss_pred CeEEeeCCCCCCC--CCCCCCCcceeccccCC-CCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 143 PTVVHLHGGIDEP--ESDGYAKSWFTAGFEEK-GPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 143 ~t~iH~HG~~~~~--~~DG~p~~~~t~~~i~p-G~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
+|+|||||+++.+ .+||+|+ ++||+|.| |++| +|+|+++ ++||||||||.. .|+++||+|+|||+++
T Consensus 89 ~tsiHwHG~~~~~~~~~DG~~~--~tq~~I~P~G~~~---~Y~f~~~-q~GT~wYH~H~~----~q~~~Gl~G~liV~~~ 158 (559)
T 2q9o_A 89 GTSIHWHGIXQKDTNLHDGANG--VTECPIPPKGGQR---TYRWRAR-QYGTSWYHSHFS----AQYGNGVVGTIQINGP 158 (559)
T ss_dssp CBCEEEETCCCTTCGGGSCCBT--TTBCCBCTTTEEE---EEEEECC-SCEEEEEEECST----TGGGGTCEEEEEEECC
T ss_pred CceEEcCCCccCCCCCcCCCCc--cccCccCCCCCeE---EEEEECC-CCEEEEEEEccc----chhcCCceEEEEecCC
Confidence 7999999999954 5999998 89999999 9999 9999996 799999999983 5999999999999976
Q ss_pred CCCCCCCCCCCCcCce-eEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---------CceeecC-
Q 008840 220 DVEAPLRLPSGDVFDR-PLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---------PRMTVRR- 288 (551)
Q Consensus 220 ~~~~~~~lP~~~~~e~-~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---------P~~~v~~- 288 (551)
+ .. .++.|. +|+|+||+++.++++.+..... .+..++.++|||+.. +.++|++
T Consensus 159 ~-~~------~~d~d~~~l~l~Dw~~~~~~~~~~~~~~~---------~~~~~d~~liNG~~~~~~~~~g~~~~~~v~~g 222 (559)
T 2q9o_A 159 A-SL------PYDIDLGVFPITDYYYRAADDLVHFTQNN---------APPFSDNVLINGTAVNPNTGEGQYANVTLTPG 222 (559)
T ss_dssp C-SS------CCSEEEEEEEEEEECSSCHHHHHHHHTTS---------CCCCBSEEEETTBCBCTTTCCBCCCEEEECTT
T ss_pred C-cC------CCcccceEEEEeccccCCHHHHhhhhhcC---------CCCccceeEECCccccCcCCCCCceEEEEcCC
Confidence 5 22 136676 9999999988777654321110 123478999999984 4788987
Q ss_pred eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC--CCCCC
Q 008840 289 RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA--PYPYP 366 (551)
Q Consensus 289 ~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~--~~~~~ 366 (551)
++|||||||+|+.+.+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++.+| +|+|+... ....
T Consensus 223 ~~~RlRliNa~~~~~~~~~i-~gh~~~vi~~DG~~~-~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~- 298 (559)
T 2q9o_A 223 KRHRLRILNTSTENHFQVSL-VNHTMTVIAADMVPV-NAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAAC- 298 (559)
T ss_dssp CEEEEEEEECCSSCCEEEEE-TTBCEEEEEETTEEE-EEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTT-
T ss_pred CEEEEEEEecCCCceEEEEE-CCCceEEEecCCccc-CceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEecccccc-
Confidence 89999999999999999999 699999999999999 799999999999999999999988654 89998764 1110
Q ss_pred CCCCCCCCCCceEEEEEccCCCCCCCCC--C---------CCCCCCCCCCCccC--c--eeeEEeeeecccCCCCcceEE
Q 008840 367 AGNPVNDANGKVMKFIILKNRETDPWRV--P---------EKLIEYPSADLSAA--S--TTRYIAMYEYTSNTGKPTHLL 431 (551)
Q Consensus 367 ~g~~~~~~~~~vm~f~v~~~~~~~~~~l--P---------~~L~~~~~~~~~~~--~--~~r~~~l~~~~~~~g~~~~~~ 431 (551)
+.... ......+++.+.....+... + ..|.|..+.+.+.. . ..+.+.+.... ..+....|+
T Consensus 299 -~~~~~--~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 374 (559)
T 2q9o_A 299 -GGSLN--PHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL-TGTPLFVWK 374 (559)
T ss_dssp -CCBSS--SCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-SSSSSCEEE
T ss_pred -CCCCC--CceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCcccccceeEEEEEEeec-CCCceEEEE
Confidence 11111 11233444443321111111 1 12233222111111 1 12334333211 112245799
Q ss_pred EcccccCCCC-CC--------------------Cc--ceeeeEEEEeee----eeeeeeccccCceeeeeeeecc-----
Q 008840 432 INAKTLEDPV-TE--------------------TP--KTLDQTELVNLE----EFKACMNKINDAIKCNLSKHAC----- 479 (551)
Q Consensus 432 INg~~f~~~~-~~--------------------~~--~~~~~~~l~n~~----~~~~~~~~~~~~~~~~v~~~~~----- 479 (551)
|||++|..+. .. .+ ..++.|.+.|.. .+.|+||+|+|.| .+.....
T Consensus 375 iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F--~Vl~~g~~~~~~ 452 (559)
T 2q9o_A 375 VNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDF--LVLGRSPDVPAA 452 (559)
T ss_dssp ETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCE--EEEEESCCCCTT
T ss_pred ECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCce--EEEecccccccc
Confidence 9999996431 11 00 125667777755 6899999999954 5554322
Q ss_pred ----CCc------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceE
Q 008840 480 ----GKK------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLK 548 (551)
Q Consensus 480 ----G~~------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~ 548 (551)
|.- ......++.|||||.|+++++++|+|+++ ||| ||||||||+|||.|||.+|.
T Consensus 453 ~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad--------------NPG~W~~HCHil~H~~~GM~~~~~ 518 (559)
T 2q9o_A 453 SQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD--------------NPGAWLFHCHIAWHVSGGLSVDFL 518 (559)
T ss_dssp SCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC--------------SCEEEEEEECCHHHHHTTCEEEEE
T ss_pred cccccccCccccccccccCCCCccceEEccCCccEEEEEEcC--------------CCeeEEEEecchhHhhcCCeEEEE
Confidence 210 11223357899999999999999987766 889 99999999999999999997
Q ss_pred E
Q 008840 549 L 549 (551)
Q Consensus 549 V 549 (551)
|
T Consensus 519 v 519 (559)
T 2q9o_A 519 E 519 (559)
T ss_dssp E
T ss_pred E
Confidence 6
No 14
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=5.8e-70 Score=600.26 Aligned_cols=415 Identities=20% Similarity=0.218 Sum_probs=298.0
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCC-CCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLP-PNHILPIDPTIPTAMPSNKKGV 142 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~-~~~~~~~~~~~~~~~~~~~~~~ 142 (551)
.++++.+.+. .+.++...+.+|+|| |++|||+||+++||+|+|+++|+|+ +
T Consensus 4 ~~y~~~v~~~--~~~~dg~~~~~~~~N-----g~~PGP~I~~~~GD~v~v~v~N~l~~~--------------------- 55 (552)
T 1aoz_A 4 RHYKWEVEYM--FWAPNCNENIVMGIN-----GQFPGPTIRANAGDSVVVELTNKLHTE--------------------- 55 (552)
T ss_dssp EEEEEEEEEE--EECTTSSCEEEEEET-----TBSSCCCEEEETTCEEEEEEEECCSSC---------------------
T ss_pred EEEEEEEEEE--EEcCCCceEEEEEEC-----CccCCCcEEEeCCCEEEEEEEeCCCCC---------------------
Confidence 3566666555 355666678999998 9999999999999999999999998 5
Q ss_pred CeEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 143 PTVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 143 ~t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|+|||||+++.+. +||+|+ ++||+|.||++| +|+|++ +++||||||||.. .|+++||+|+|||++++
T Consensus 56 ~tsiHwHGl~~~~~~~~DGv~~--vtq~~I~PG~s~---tY~f~~-~~~GT~wYHsH~~----~q~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 56 GVVIHWHGILQRGTPWADGTAS--ISQCAINPGETF---FYNFTV-DNPGTFFYHGHLG----MQRSAGLYGSLIVDPPQ 125 (552)
T ss_dssp CBCEEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEEC-CSCEEEEEEECST----TTGGGTCEEEEEEECCT
T ss_pred CeeEEeCCCccCCCcccCCCcc--cccCCcCCCCeE---EEEEEC-CCCEEEEEEECch----hHHhccCeeeEEEeCCc
Confidence 89999999999877 999999 899999999999 999999 5999999999983 58999999999999765
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC------------------
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP------------------ 282 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P------------------ 282 (551)
+....++ +++|++|+|+||++....++...... .+ ..|. ..++.++|||+..+
T Consensus 126 -~~~~~~~--~d~e~~l~l~Dw~~~~~~~~~~~~~~-~~---~~~~--~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~ 196 (552)
T 1aoz_A 126 -GKKEPFH--YDGEINLLLSDWWHQSIHKQEVGLSS-KP---IRWI--GEPQTILLNGRGQFDCSIAAKYDSNLEPCKLK 196 (552)
T ss_dssp -TCCCSSC--CSEEEEEEEEEECSSCHHHHHHHTTS-SS---CCCC--CSCSEEEETTBCCSSSBTTGGGCTTSCBCCCC
T ss_pred -ccCCCCC--CCccceEEeecccCCCHHHHHhhhhc-cc---ccCC--CCCCeEEECCccccCcccCccccccccccccc
Confidence 3222223 36899999999966543333211110 00 0111 13678999999866
Q ss_pred --------ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCc
Q 008840 283 --------RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSD 353 (551)
Q Consensus 283 --------~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~ 353 (551)
.++|++ ++|||||||+|..+.+.|+| +||+|+||++||+++ +|+.+++|.|+|||||||+|++++.+.+
T Consensus 197 ~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i-~gh~~~vi~~DG~~~-~P~~~~~l~i~pgqR~dvlv~~~~~~~g 274 (552)
T 1aoz_A 197 GSESCAPYIFHVSPKKTYRIRIASTTALAALNFAI-GNHQLLVVEADGNYV-QPFYTSDIDIYSGESYSVLITTDQNPSE 274 (552)
T ss_dssp SCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEE-TTCCEEEEEETTEEE-EEEEESCEEECTTCEEEEEEECCSCTTC
T ss_pred CCCCCCceEEEEcCCCEEEEEEEcccccceEEEEE-cCcEEEEEEECCccc-CceEEeEEEEcCCcEEEEEEEcCCCCCC
Confidence 688988 89999999999999999999 699999999999999 8999999999999999999999543334
Q ss_pred eEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCC-CC-CCCCCCC-------------CCCCCC--CCCccCceeeEEe
Q 008840 354 VAILANDAPYPYPAGNPVNDANGKVMKFIILKNRE-TD-PWRVPEK-------------LIEYPS--ADLSAASTTRYIA 416 (551)
Q Consensus 354 ~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~-~~-~~~lP~~-------------L~~~~~--~~~~~~~~~r~~~ 416 (551)
+|+|+...... .+ .....+..+++.+... .. ....|.. |.++.. .........|++.
T Consensus 275 ~y~i~~~~~~~--~~----~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 348 (552)
T 1aoz_A 275 NYWVSVGTRAR--HP----NTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIF 348 (552)
T ss_dssp CEEEEEEEESS--CC----CSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEE
T ss_pred CEEEEEEcccC--CC----CCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEE
Confidence 89988753210 00 0112344455544321 11 1111210 112110 1111122345554
Q ss_pred eeecccCCCCcceEEEcccccCCCCCC------------------------------C----------------cceeee
Q 008840 417 MYEYTSNTGKPTHLLINAKTLEDPVTE------------------------------T----------------PKTLDQ 450 (551)
Q Consensus 417 l~~~~~~~g~~~~~~INg~~f~~~~~~------------------------------~----------------~~~~~~ 450 (551)
+............|+|||++|..+... . ...+++
T Consensus 349 l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ 428 (552)
T 1aoz_A 349 LLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVD 428 (552)
T ss_dssp EEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEE
T ss_pred EEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEE
Confidence 432211111234699999988542100 0 011678
Q ss_pred EEEEeeee------eeeeeccccCceeeeeeeeccCCc-----cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCC
Q 008840 451 TELVNLEE------FKACMNKINDAIKCNLSKHACGKK-----QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASY 519 (551)
Q Consensus 451 ~~l~n~~~------~~~~~~~~~~~~~~~v~~~~~G~~-----~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~ 519 (551)
|.+.|.+. ..|+||+|+|.| .+.....|.- ......++.|||||.|+|+++++|+|+++
T Consensus 429 ivi~N~~~~~~~~~~~HP~HLHGh~F--~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-------- 498 (552)
T 1aoz_A 429 VILQNANMMKENLSETHPWHLHGHDF--WVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-------- 498 (552)
T ss_dssp EEEEECCCSSTTCCCCEEEEETTCCE--EEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC--------
T ss_pred EEEeCCcccccccCCCCCEEEcCCce--EEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC--------
Confidence 89998874 459999999954 5555434431 11123467899999999999999988877
Q ss_pred CCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 520 PFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 520 p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
||| |||||||++|++.|||..|.+
T Consensus 499 ------NPG~W~~HCHi~~H~~~GM~~~~~~ 523 (552)
T 1aoz_A 499 ------NPGVWAFHCHIEPHLHMGMGVVFAE 523 (552)
T ss_dssp ------SCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred ------CCeEEEEEeeehhHhhCCCeEEEEe
Confidence 889 999999999999999999976
No 15
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.4e-67 Score=576.95 Aligned_cols=406 Identities=19% Similarity=0.216 Sum_probs=296.4
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.+. .++.-...+|+|| |++|||+||+++||+|+|+++|+|+.. +
T Consensus 68 ~~~~l~v~~~~~--~pdG~~~~~~~~N-----G~~PGP~I~~~~GD~v~V~v~N~l~~~--------------------~ 120 (580)
T 3sqr_A 68 REYWLSVENSTI--TPDGYTRSAMTFN-----GTVPGPAIIADWGDNLIIHVTNNLEHN--------------------G 120 (580)
T ss_dssp EEEEEEEEEEEE--CSSSBCEEEEEET-----TBSSCCCEEEETTCEEEEEEEECCSSC--------------------C
T ss_pred EEEEEEEEEEEe--cCCCeEEEEEEEC-----CccCCceEEEeCCCEEEEEEEECCCCC--------------------c
Confidence 356766667653 4444478899998 999999999999999999999999832 7
Q ss_pred eEEeeCCCCCCC--CCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCC
Q 008840 144 TVVHLHGGIDEP--ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDV 221 (551)
Q Consensus 144 t~iH~HG~~~~~--~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~ 221 (551)
|+|||||+++.. .+||+|+ ++||+|+||++| +|+|+++ ++||||||+|.. .|+++||+|+|||++++
T Consensus 121 tsIHwHGl~~~~t~~~DGvp~--vTq~pI~PG~sf---tY~f~~~-q~GT~WYHsH~~----~q~~~GL~G~lIV~~p~- 189 (580)
T 3sqr_A 121 TSIHWHGIRQLGSLEYDGVPG--VTQCPIAPGDTL---TYKFQVT-QYGTTWYHSHFS----LQYGDGLFGPLIINGPA- 189 (580)
T ss_dssp BCEEETTCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECC-CCEEEEEEECST----TGGGGTCEEEEEEECCC-
T ss_pred ceEEecccccCCCccccCCCc--cccCCCCCCCeE---EEEEECC-CCcceEEeeccc----ccccCcCEEEEEeeCcc-
Confidence 999999999974 5999999 899999999999 9999996 899999999983 58999999999999766
Q ss_pred CCCCCCCCCCcCce-eEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc-----------------Cc
Q 008840 222 EAPLRLPSGDVFDR-PLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW-----------------PR 283 (551)
Q Consensus 222 ~~~~~lP~~~~~e~-~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~-----------------P~ 283 (551)
+.. ++.|. +|+|+||+++..+++....... ....+|.++|||+.. +.
T Consensus 190 ~~~------yD~d~~~l~l~Dw~~~~~~~~~~~~~~~---------~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~ 254 (580)
T 3sqr_A 190 TAD------YDEDVGVIFLQDWAHESVFEIWDTARLG---------APPALENTLMNGTNTFDCSASTDPNCVGGGKKFE 254 (580)
T ss_dssp SSC------CSEEEEEEEEEEECSSCHHHHHHHHTTS---------CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCE
T ss_pred cCC------CCccceEEEEEEEecCCHHHHHHHHhcc---------CCCCCceEEECCcccCCCccccccccccCCCcee
Confidence 321 36676 9999999877655543221100 123478999999964 56
Q ss_pred eeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCC
Q 008840 284 MTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAP 362 (551)
Q Consensus 284 ~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~ 362 (551)
++|++ ++|||||||+|..+.+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++.+ ++|+|+....
T Consensus 255 ~~v~~G~~yRlRlINa~~~~~~~~~i-~gh~~~VIa~DG~~v-~P~~~~~l~i~pGqRydVlv~a~~~~-g~Y~i~a~~~ 331 (580)
T 3sqr_A 255 LTFVEGTKYRLRLINVGIDSHFEFAI-DNHTLTVIANDLVPI-VPYTTDTLLIGIGQRYDVIVEANAAA-DNYWIRGNWG 331 (580)
T ss_dssp EECCTTCEEEEEEEECCSSCCEEEEE-TTCCEEEEEETTEEE-EEEEESSEEECTTCEEEEEEECCSCS-SEEEEECCCC
T ss_pred EEEcCCCEEEEEEEeccCCceeeEEe-CCceEEEEEeCCccC-CceEeeEEEEccceEEEEEEEeCCCC-CeEEEEEecc
Confidence 78888 89999999999999999999 699999999999999 79999999999999999999999875 4999998653
Q ss_pred CCCCCCCCCCCCCCceEEEEEccCCCCCCCCCC------------CCCCCCCCCCCc-cCceeeEEeeeecccCCCCcce
Q 008840 363 YPYPAGNPVNDANGKVMKFIILKNRETDPWRVP------------EKLIEYPSADLS-AASTTRYIAMYEYTSNTGKPTH 429 (551)
Q Consensus 363 ~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP------------~~L~~~~~~~~~-~~~~~r~~~l~~~~~~~g~~~~ 429 (551)
... ............+++.+.....+...| ..|.|+.+...+ .+..++.+.+. .+....
T Consensus 332 ~~~---~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~-----~~~~~~ 403 (580)
T 3sqr_A 332 TTC---STNNEAANATGILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSA-----FTNYFT 403 (580)
T ss_dssp TTT---SCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEE-----ESSSEE
T ss_pred ccc---CccCCCCceEEEEEECCCCCCCCCCCCCCccchhhcccccccccCCCCCCCCccceEEEEEec-----cCCcee
Confidence 211 010111112334455443211111111 133333322111 22334444442 123456
Q ss_pred EEEcccccCCC-CCC--------------------Cc-----ceeeeEEEEeee--eeeeeeccccCceeeeeeeeccCC
Q 008840 430 LLINAKTLEDP-VTE--------------------TP-----KTLDQTELVNLE--EFKACMNKINDAIKCNLSKHACGK 481 (551)
Q Consensus 430 ~~INg~~f~~~-~~~--------------------~~-----~~~~~~~l~n~~--~~~~~~~~~~~~~~~~v~~~~~G~ 481 (551)
|.|||.+|..+ ..+ .+ ..++++.+.|.. ...|+||+|+|.| .+.....|.
T Consensus 404 w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F--~vv~~g~G~ 481 (580)
T 3sqr_A 404 WTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDF--FIVAQETDV 481 (580)
T ss_dssp EEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCE--EEEEEESSC
T ss_pred EEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccccceeeEecCceE--EEEecCCCc
Confidence 99999998531 111 01 124556666665 5689999999965 454433342
Q ss_pred c------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 482 K------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 482 ~------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
- .......+.+||||.|+|++.+.|+|+++ ||| |+|||||++|++.|||..|.+
T Consensus 482 f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad--------------NPG~W~~HCHi~~H~~~Gm~~~~~e 542 (580)
T 3sqr_A 482 FNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD--------------NPGSWLLHCHIAWHASEGLAMQFVE 542 (580)
T ss_dssp CCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC--------------SCEEEEEEECSHHHHHTTCEEEEEE
T ss_pred cCccccccccccCCCceeeEEEeCCCceEEEEEEcC--------------CCeeeEEEECcHHHhhCCCcEEEEE
Confidence 1 11234457899999999999999988776 899 999999999999999999875
No 16
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=8.3e-67 Score=565.73 Aligned_cols=409 Identities=17% Similarity=0.220 Sum_probs=290.9
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.+.. +.++.-...+|+|| |++|||+||+++||+|+|+++|+|++.. ...+|
T Consensus 6 ~~~l~i~~~~--~~pdg~~~~~~~~N-----G~~PGP~I~~~~GD~v~v~v~N~l~~~~----------------~~~~t 62 (495)
T 3t6v_A 6 VTDLHIVNAD--IVPDGFVRPAVNAG-----GTFPGPVIAGNVGDNFQIVTFNQLIECS----------------MLVDT 62 (495)
T ss_dssp EEEEEEEEEE--ECTTSCCEEEEEET-----TSSSCCEEEEETTCEEEEEEEECCCCGG----------------GCSCB
T ss_pred eEEEEEEEEE--EcCCCceEEEEEEC-----CcccCCeEEEECCcEEEEEEEECCCCcc----------------CCCce
Confidence 3455555553 44544467899997 9999999999999999999999998510 01269
Q ss_pred EEeeCCCCCCC--CCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDEP--ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~~--~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++.. .+||+|+ +|||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||++++ +
T Consensus 63 siHwHGl~~~~~~~~DGv~~--vtq~pI~PG~sf---tY~f~~~~~~GT~wYHsH~~----~q~~~GL~G~lIV~~~~-~ 132 (495)
T 3t6v_A 63 SIHWHGEFQKGTNWADGPAF--ITQCPIIVGNSF---SYNFNVPGMAGTYWYHSHLT----TQYCDGLRGPFVVYDPN-D 132 (495)
T ss_dssp CEEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECTTCCEEEEEEECST----TGGGGTCEEEEEEECTT-C
T ss_pred EEEeCCcccCCCccccCCCc--cccCCCCCCCeE---EEEEEeCCCCceeeeeccch----hHHhcCceEEEEEcCcc-c
Confidence 99999999864 5999998 899999999999 99999977999999999994 48999999999999776 2
Q ss_pred CCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcc----------cCceeecC-eE
Q 008840 223 APLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA----------WPRMTVRR-RK 290 (551)
Q Consensus 223 ~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~----------~P~~~v~~-~~ 290 (551)
+...+... +.|++|+|+||+++.++++. +. ....+|.++|||+. ++.++|++ ++
T Consensus 133 -~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~----~~---------~p~~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~ 198 (495)
T 3t6v_A 133 -PDANLYDVDDDTTIITLADWYHVLAKEMG----AG---------GAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKR 198 (495)
T ss_dssp -TTGGGCSBCSGGGEEEEEEECSSCGGGSC----SS---------SCCCCSEEEETTBCCBSSSCCCCCCCEEEECTTCE
T ss_pred -cccccCCCCCceeEEEEecccCCchhhhc----cC---------CCCCCcEEEECCcCcCCCCcccCCceEEEEcCCCE
Confidence 11111111 45679999999876654421 10 01247899999984 46789998 89
Q ss_pred EEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCC
Q 008840 291 YRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNP 370 (551)
Q Consensus 291 ~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~ 370 (551)
|||||||+|+.+.+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++..| +|+|+..... +..
T Consensus 199 ~RlRliN~~~~~~~~~~i-~gh~~~via~DG~~~-~P~~~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~----~~~ 271 (495)
T 3t6v_A 199 YRMRLVSISCDPNYDFSI-DGHDMTIIETDGVDS-QELTVDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNS----GGE 271 (495)
T ss_dssp EEEEEEECCSSCCEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESS----SSC
T ss_pred EEEEEEecCCCeeEEEEE-CCCeEEEEEeCCccc-CCEEeeeEEEcCceEEEEEEECCCCCc-eEEEEEeccc----Ccc
Confidence 999999999999999999 699999999999998 899999999999999999999988654 8999875321 110
Q ss_pred CCCCCCceEEEEEccCCCCCC-CCCC---------CCCCCCCCCCCc----cCceeeEEeeeecccCCCCcceEEEcccc
Q 008840 371 VNDANGKVMKFIILKNRETDP-WRVP---------EKLIEYPSADLS----AASTTRYIAMYEYTSNTGKPTHLLINAKT 436 (551)
Q Consensus 371 ~~~~~~~vm~f~v~~~~~~~~-~~lP---------~~L~~~~~~~~~----~~~~~r~~~l~~~~~~~g~~~~~~INg~~ 436 (551)
..........+++.+.....+ ...+ ..|.++.....+ .....+.+.+.-... ...|+|||++
T Consensus 272 ~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~----~~~w~iNg~s 347 (495)
T 3t6v_A 272 GFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFA----CGNFVINGVS 347 (495)
T ss_dssp SCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEE----TTEEEETTBC
T ss_pred ccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCCCcEEEEEEEEec----CcEEEEcCEe
Confidence 000011234455554321111 1111 123333221111 011123333221111 1269999999
Q ss_pred cCCCCCC---------------Cc----c-----eeeeEEEE-eeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCC
Q 008840 437 LEDPVTE---------------TP----K-----TLDQTELV-NLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQG 491 (551)
Q Consensus 437 f~~~~~~---------------~~----~-----~~~~~~l~-n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~ 491 (551)
|..+... .+ . .++++.+. |.....|+||+|+|.| .+.. ..|. .......+.
T Consensus 348 ~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F--~vl~-~~g~-~~~n~~~P~ 423 (495)
T 3t6v_A 348 FTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDF--AVSE-SASN-STSNYDDPI 423 (495)
T ss_dssp CCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCE--EEEE-CTTC-CCCCSSSCC
T ss_pred cCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcE--EEEe-cCCC-CCcccCCCC
Confidence 9754221 00 0 14566666 5667889999999955 4543 3442 222334678
Q ss_pred cCccEEeCC-CcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 492 WKNVYKITP-GYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 492 wkDTV~v~p-g~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
|||||.|++ |+++.|+|+++ ||| |||||||++|++.|||..|.+
T Consensus 424 ~rDtv~v~~~g~~~~irf~ad--------------nPG~W~~HCHi~~H~~~Gm~~~~~e 469 (495)
T 3t6v_A 424 WRDVVSIGGVGDNVTIRFCTD--------------NPGPWFLHCHIDWHLDAGFAIVFAE 469 (495)
T ss_dssp EESEEECCSTTCEEEEEEECC--------------SCEEEEEEESCHHHHHTTCEEEEEE
T ss_pred CccEEEcCCCCcEEEEEEEcC--------------CCeeEEEEecchhHhhcCCeEEEEE
Confidence 999999997 99999977766 899 999999999999999998853
No 17
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=4e-66 Score=560.46 Aligned_cols=407 Identities=17% Similarity=0.231 Sum_probs=290.7
Q ss_pred EEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeE
Q 008840 66 LEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTV 145 (551)
Q Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~ 145 (551)
+++.+.+. .+.++.-...+|+|| |++|||+||+++||+|+|+++|+|++.+ ...+|+
T Consensus 6 ~~l~v~~~--~~~pdG~~~~~~~~N-----G~~PGP~I~~~~GD~v~V~v~N~l~~~~----------------~~~~ts 62 (499)
T 3pxl_A 6 ADLTITDA--AVSPDGFSRQAVVVN-----GVTPGPLVAGNIGDRFQLNVIDNLTNHT----------------MLKSTS 62 (499)
T ss_dssp EEEEEEEE--EECTTSCCEEEEEET-----TBSSCCCEEEETTCEEEEEEEECCCCGG----------------GCSCBC
T ss_pred EEEEEEEE--EEcCCCcEEEEEEEC-----CcccCCeEEEeCCCEEEEEEEECCCCcc----------------CCCceE
Confidence 44444454 344544477899997 9999999999999999999999998510 012799
Q ss_pred EeeCCCCCC--CCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 146 VHLHGGIDE--PESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 146 iH~HG~~~~--~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
|||||+++. +.+||+|+ +|||+|.||++| +|+|++.+++||||||||.. .|+++||+|+|||++++ +
T Consensus 63 iHwHGl~~~~~~~~DGv~~--vtq~pI~PG~s~---tY~f~~~~~~GT~wYHsH~~----~q~~~GL~G~lIV~~~~-~- 131 (499)
T 3pxl_A 63 IHWHGFFQHGTNWADGPAF--INQCPISPGHSF---LYDFQVPDQAGTFWYHSHLS----TQYCDGLRGPFVVYDPN-D- 131 (499)
T ss_dssp EEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECSSCCEEEEEEECST----TGGGGTCEEEEEEECTT-C-
T ss_pred EEeCCcccCCCccccCCCc--cccCCCCCCCeE---EEEEEcCCCCceeeeeccch----hHHhccceeEEEEcCCc-c-
Confidence 999999986 45999998 899999999999 99999977999999999994 48999999999999776 2
Q ss_pred CCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcc---------cCceeecC-eEEE
Q 008840 224 PLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA---------WPRMTVRR-RKYR 292 (551)
Q Consensus 224 ~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~---------~P~~~v~~-~~~R 292 (551)
+...+... +.|++|+|+||+++.+++. +. ....+|.++|||+. .|.++|++ ++||
T Consensus 132 ~~~~~~~~d~~~~~l~l~Dw~~~~~~~~-----~~---------~p~~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~R 197 (499)
T 3pxl_A 132 PHASRYDVDNDDTVITLADWYHTAAKLG-----PR---------FPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYR 197 (499)
T ss_dssp TTGGGCSBCSGGGEEEEEEECSSCTTTS-----CS---------SCSSCSEEEETTBCCCTTCTTCCCCEEEECTTCEEE
T ss_pred cccccCCCCCceEEEEEEcccCCccccc-----cC---------CCCCCcEEEECCCCcCCCCCCCCcceEEEcCCCEEE
Confidence 21111111 3567999999987655431 10 12347899999984 46899998 8999
Q ss_pred EEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCC
Q 008840 293 FRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVN 372 (551)
Q Consensus 293 lRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~ 372 (551)
|||||+|+.+.+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++..| +|+|+..... +....
T Consensus 198 lRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~P~~~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~----~~~~~ 270 (499)
T 3pxl_A 198 FRLVSLSCNPNHTFSI-DGHNLTIIEVDSVNS-QPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNF----GNVGF 270 (499)
T ss_dssp EEEEECCSSCCEEEEE-TTBCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESS----SSCSC
T ss_pred EEEEecCCCeeEEEEE-CCCeEEEEEECCccc-CceEeeeEEECCCcEEEEEEECCCCCc-eEEEEEeccc----Ccccc
Confidence 9999999999999999 699999999999998 899999999999999999999988654 8999875321 10000
Q ss_pred CCCCceEEEEEccCCCCCCC-CC--------CCCCCCCCCCCCc----cCceeeEEeeeecccCCCCcceEEEcccccCC
Q 008840 373 DANGKVMKFIILKNRETDPW-RV--------PEKLIEYPSADLS----AASTTRYIAMYEYTSNTGKPTHLLINAKTLED 439 (551)
Q Consensus 373 ~~~~~vm~f~v~~~~~~~~~-~l--------P~~L~~~~~~~~~----~~~~~r~~~l~~~~~~~g~~~~~~INg~~f~~ 439 (551)
........+++.+....++. .. ...|.++.....+ .....+.+.+.-.. .+ ..|+|||++|..
T Consensus 271 ~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--~~--~~w~iNg~s~~~ 346 (499)
T 3pxl_A 271 DGGINSAILRYDGAPAVEPTTNQTTSVKPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF--NG--SNFFINGASFVP 346 (499)
T ss_dssp GGGTTEEEEEETTSCSSCCCCCCCCCSSBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--CS--SCEEETTBCCCC
T ss_pred CCCceEEEEEeCCCCCCCCCCCCCCCCcccccccccccccccCCCcccCCCCcEEEEEEEEe--cC--cEEEEcCEecCC
Confidence 01112345566553221111 00 1133443221111 01123344332111 11 269999999975
Q ss_pred CCCC---------------Cc---------ceeeeEEEE---eeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCc
Q 008840 440 PVTE---------------TP---------KTLDQTELV---NLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGW 492 (551)
Q Consensus 440 ~~~~---------------~~---------~~~~~~~l~---n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~w 492 (551)
+... .+ ..++++.+. |.....|+||+|+|.| .+.. ..|. .......+.|
T Consensus 347 ~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F--~Vl~-~~g~-~~~n~~~P~~ 422 (499)
T 3pxl_A 347 PTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTF--AVVR-SAGS-TVYNYDNPIF 422 (499)
T ss_dssp CSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCE--EEEE-CTTC-CCCCSSSCCE
T ss_pred CCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcE--EEEe-ccCC-cccccCCCCc
Confidence 3211 00 015667776 5667789999999965 4443 2342 2223346789
Q ss_pred CccEEeCC---CcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITP---GYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~p---g~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
||||.|++ |+++.|+|+.+ ||| |||||||++|++.|||..|..
T Consensus 423 rDtv~v~~~~pg~~~~irf~ad--------------nPG~W~~HCHi~~H~~~Gm~~~~~e 469 (499)
T 3pxl_A 423 RDVVSTGTPAAGDNVTIRFDTN--------------NPGPWFLHCHIDFHLEGGFAVVMAE 469 (499)
T ss_dssp ESEEECCCGGGTCEEEEEEECC--------------SCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred cceEEcCCcCCCcEEEEEEEcC--------------CCceEEEEeCChhHhhCCCcEEEEE
Confidence 99999987 99999977766 899 999999999999999998853
No 18
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=5.3e-48 Score=391.88 Aligned_cols=192 Identities=21% Similarity=0.345 Sum_probs=163.9
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.++++.++. .+.+|+|| |++|||+||+++||+|+|+|+|+|+. +
T Consensus 35 ~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pgP~i~~~~Gd~v~v~~~N~~~~---------------------~ 87 (288)
T 3gdc_A 35 REWDIVAVDKDFEIAPGI-IFKGWSYN-----GRIPGPTLWAREGDALRIHFTNAGAH---------------------P 87 (288)
T ss_dssp EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEEEEEECSSS---------------------C
T ss_pred EEEEEEEEEEEEEeCCCc-EEEEEEEC-----CccCCCcEEEeCCCEEEEEEEeCCCC---------------------c
Confidence 467888889889998877 78999998 99999999999999999999999997 8
Q ss_pred eEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 144 t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
+++||||++ .+.+||+|+ .+++.|.||+++ +|+|++ +++||||||||.++ ++.|+++||+|+|||++++ .
T Consensus 88 ~~iH~HG~~-~~~~DG~p~--~~~~~i~PG~~~---~y~f~~-~~~Gt~~yH~H~~~-~~~~~~~Gl~G~liV~~~~-~- 157 (288)
T 3gdc_A 88 HTIHFHGVH-RATMDGTPG--IGAGSIAPGQSF---TYEFDA-TPFGTHLYHCHQSP-LAPHIAKGLYGGFIVEPKE-G- 157 (288)
T ss_dssp BCCEESSCC-CGGGSCCTT--STTCSBCTTCEE---EEEEEC-CSCEEEEEECCCSS-HHHHHHTTCEEEEEEECSS-C-
T ss_pred ccEEecccc-ccccCCCCC--ccceeECCCCEE---EEEEEc-CCCccEEEEecCcc-hHHHHhCcCeEEEEEeCCc-c-
Confidence 999999998 567999998 688899999999 999999 49999999999976 4679999999999999654 2
Q ss_pred CCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC----ceeecC-eEEEEEEEec
Q 008840 224 PLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP----RMTVRR-RKYRFRIINA 298 (551)
Q Consensus 224 ~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P----~~~v~~-~~~RlRllNa 298 (551)
.|.. ++|++|+++||+.+ +|+ .++.++|||+.++ .++++. +++||||+|+
T Consensus 158 ---~~~~-d~e~~l~~~d~~~~-~g~--------------------~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~ 212 (288)
T 3gdc_A 158 ---RPPA-DDEMVMVMNGYNTD-GGD--------------------DNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINV 212 (288)
T ss_dssp ---CCCC-SEEEEEEEEEECCS-STT--------------------CCSEEEETTSTTHHHHSCEEEETTCCEEEEEEEC
T ss_pred ---CCCC-cceEEEEEeeEecC-CCC--------------------CcceEEECcccccccCcccccCCCCEEEEEEEeC
Confidence 2333 78999999998654 221 2579999999875 478887 8999999999
Q ss_pred CCCc-eEEEEEcCCceEEEEE
Q 008840 299 SNAR-FFRFFFTNGLRFIHVG 318 (551)
Q Consensus 299 s~~~-~~~l~l~~g~~~~via 318 (551)
+... ...+|| +|+.|++++
T Consensus 213 g~~~~~H~fHl-hG~~f~v~~ 232 (288)
T 3gdc_A 213 LEYDPINSFHI-HGNFFHYYP 232 (288)
T ss_dssp CCSSSEEEEEE-TTCCEEEEE
T ss_pred CCCCcceeEEE-cCCEEEEEc
Confidence 9654 678888 799998753
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.8e-45 Score=377.97 Aligned_cols=245 Identities=23% Similarity=0.373 Sum_probs=204.2
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.++++.++. .+.+|+|| |++|||+|||++||+|+|+|+|.|+. +
T Consensus 3 ~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pGP~i~~~~Gd~v~v~~~N~l~~---------------------~ 55 (318)
T 3g5w_A 3 REFDLSIEDTRIVLVGKR-DFHTFAFN-----GQVPAPLIHVMEGDDVTVNVTNMTTL---------------------P 55 (318)
T ss_dssp EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEEEEEECSSS---------------------C
T ss_pred EEEEEEEEEEEEEcCCCc-EEEEEEEC-----CccCCceEEEeCCCEEEEEEEeCCCC---------------------c
Confidence 367788889888998776 67899998 99999999999999999999999987 8
Q ss_pred eEEeeCCCCCCC--CCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhh-hccceEEEEEeCCC
Q 008840 144 TVVHLHGGIDEP--ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNL-LAGLIGAYILRHPD 220 (551)
Q Consensus 144 t~iH~HG~~~~~--~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv-~~GL~G~~iV~dp~ 220 (551)
++|||||+++.+ .+||+|+ +++|+|.||+++ +|+|+++ ++||||||||.+ +..|+ ++||+|+|||++++
T Consensus 56 ~siH~HG~~~~~~~~~DG~p~--~t~~~i~PG~~~---~y~f~~~-~~Gt~wYH~H~~--~~~~~~~~Gl~G~lIV~~~~ 127 (318)
T 3g5w_A 56 HTIHWHGMLQRGTWQSDGVPH--ATQHAIEPGDTF---TYKFKAE-PAGTMWYHCHVN--VNEHVTMRGMWGPLIVEPKN 127 (318)
T ss_dssp BCCEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECC-SCEEEEEECCSS--HHHHHHHSCCEEEEEEECSS
T ss_pred eeEEecCcCCCCCcccCCCcc--cccccCCCCCEE---EEEEEcC-CCEEEEEEccCC--hhhhhccCCCEEEEEEcCCC
Confidence 999999999876 5999998 789999999999 9999996 899999999994 34455 59999999999544
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCc---eeecC-eEEEEEEE
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPR---MTVRR-RKYRFRII 296 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~---~~v~~-~~~RlRll 296 (551)
. ..++...++|++|+|+||..+...+.. ..+ .++..+++++|||+.+|. ++++. ++|||||+
T Consensus 128 -~--~~~~~~~d~e~~l~l~dw~~~~~~~~~--~~~---------~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrli 193 (318)
T 3g5w_A 128 -P--LPIEKTVTKDYILMLSDWVSSWANKPG--EGG---------IPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLI 193 (318)
T ss_dssp -C--CHHHHTCCEEEEEEEEEECGGGTTCTT--CCC---------CTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEE
T ss_pred -c--ccccccccceeEEEEEeeccccccccc--cCC---------CCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEE
Confidence 2 222322478999999999765433210 000 112347899999999886 78888 89999999
Q ss_pred ecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 297 NASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 297 Nas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|++.. .+.||| +||.|+||+.||.++.+|..+|++.|+||||+||+|+++++ | .|.+....
T Consensus 194 N~~~~-~h~~hl-hGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~p-G-~w~~hCH~ 254 (318)
T 3g5w_A 194 GAGDH-VHAIHT-HGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP-G-LWMIHDHV 254 (318)
T ss_dssp ECSSS-CEEEEE-TTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCSC-S-EEEEEESS
T ss_pred eCCCc-eEEEEE-CCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECCCC-e-eEEEEecc
Confidence 99965 678999 79999999999999988999999999999999999999874 4 88887654
No 20
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=6.2e-46 Score=383.24 Aligned_cols=283 Identities=18% Similarity=0.187 Sum_probs=223.3
Q ss_pred CCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQ 116 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~ 116 (551)
....|.++|++||.+++ ..++ ..++++.+.+.++++.++. .+.+|+|| |++|||+|+|++||+|+|+++
T Consensus 17 ~~~~~~~~~~ip~~~~~---~~~~--~~~~~l~~~~~~~~~~~G~-~~~~~~~n-----g~~pgP~i~v~~Gd~v~v~~~ 85 (327)
T 1kbv_A 17 IDAVTTHAPEVPPAIDR---DYPA--KVRVKMETVEKTMKMDDGV-EYRYWTFD-----GDVPGRMIRVREGDTVEVEFS 85 (327)
T ss_dssp EECCCBCTTCCCCCCCC---SSCC--EEEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCBEEEETTCEEEEEEE
T ss_pred ccccccCCCCCCCCccc---CCCC--EEEEEEEEEEEEEEeCCCc-EEEEEEEC-----CccCCCeEEEeCCCEEEEEEE
Confidence 34567788899988763 2233 2467888889888887666 78899998 999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEec
Q 008840 117 NHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHD 196 (551)
Q Consensus 117 N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~ 196 (551)
|.++.. .++++||||+. .+||.+.. + .|.||++| +|+|+++ ++|||||||
T Consensus 86 N~~~~~-------------------~~~~ih~HG~~---~~dG~~~~--~--~i~PG~~~---~y~f~~~-~~Gt~wyH~ 135 (327)
T 1kbv_A 86 NNPSST-------------------VPHNVDFHAAT---GQGGGAAA--T--FTAPGRTS---TFSFKAL-QPGLYIYHC 135 (327)
T ss_dssp ECTTCS-------------------SCBCCEETTCC---SGGGGTTT--T--CBCTTEEE---EEEEECC-SCEEEEEEC
T ss_pred ECCCCC-------------------CceeeEeCccc---cCCCCCcc--e--eecCCCEE---EEEEECC-CCeEEEEEe
Confidence 998741 27999999985 47898762 2 38999999 9999996 699999999
Q ss_pred cCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCC----CceEecCCCCCCCCCCCCCCccCCc
Q 008840 197 HTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTN----GSIYMNSTGNNPSIHPQWQPEYFGD 272 (551)
Q Consensus 197 H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~----g~~~~~~~g~~~~~~~~~~~~~~gd 272 (551)
|.++ +..|+++||+|+|||++++ ++|.. ++|++|+++||..+.+ |...+.. ....+..++
T Consensus 136 h~~~-~~~~~~~Gl~G~~iV~~~~-----~~p~~-d~e~~l~~~d~~~~~~~~~~g~~~~~~---------~~~~~~~~~ 199 (327)
T 1kbv_A 136 AVAP-VGMHIANGMYGLILVEPKE-----GLPKV-DKEFYIVQGDFYTKGKKGAQGLQPFDM---------DKAVAEQPE 199 (327)
T ss_dssp CCSS-HHHHHHTTCEEEEEEECTT-----CCCCC-SEEEEEEEEEECBSSCTTCCEEECBCH---------HHHHHTCCS
T ss_pred CCCC-hhhhhhcceEEEEEEecCC-----CCCCC-ceEEEEEeeeeeccCccccccccccCh---------hHhccCCCc
Confidence 9987 7889999999999999643 34553 8899999999976542 1111100 000124578
Q ss_pred eEEECCcccCc-----eeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEE
Q 008840 273 VIVVNGKAWPR-----MTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVID 346 (551)
Q Consensus 273 ~~lVNG~~~P~-----~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~ 346 (551)
.++|||+.+|. +++++ ++|||||+|+|+++.+.|+| +||+|+||+.||++++ |..++++.|+||||+||+|+
T Consensus 200 ~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l-~Gh~f~vi~~DG~~~~-p~~~d~l~l~pGer~dv~v~ 277 (327)
T 1kbv_A 200 YVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHV-IGEIFDKVYVEGGKLI-NENVQSTIVPAGGSAIVEFK 277 (327)
T ss_dssp EEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEE-ETCCBSEEEGGGSSCE-ECSBSEEEECTTEEEEEEEE
T ss_pred eEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEE-eCCEEEEEEcCCCcCC-CCceeEEEECCCCEEEEEEE
Confidence 99999999874 88987 89999999999989999999 6999999999999994 99999999999999999999
Q ss_pred cCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC
Q 008840 347 FSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR 387 (551)
Q Consensus 347 ~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~ 387 (551)
++++ | +|+|++...... ...+.+..|+|.+..
T Consensus 278 ~~~p-G-~y~l~~h~~~~~-------~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 278 VDIP-G-NYTLVDHSIFRA-------FNKGALGQLKVEGAE 309 (327)
T ss_dssp ECSC-E-EEEEEESSTHHH-------HHSSCEEEEEEESCC
T ss_pred eCCC-e-EEEEEecccccc-------ccCCcEEEEEECCCC
Confidence 9974 4 899988642110 012346677786543
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.7e-43 Score=366.89 Aligned_cols=245 Identities=23% Similarity=0.375 Sum_probs=203.9
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.++++.++. .+.+|+|| |++|||+|+|++||+|+|+|+|.|+. +
T Consensus 4 ~~~~l~~~~~~~~~~~g~-~~~~~~~N-----G~~pGP~I~v~~Gd~v~v~v~N~l~~---------------------~ 56 (339)
T 2zwn_A 4 REFDMTIEEVTIKVAPGL-DYKVFGFN-----GQVPGPLIHVQEGDDVIVNVTNNTSL---------------------P 56 (339)
T ss_dssp EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEEEEEEESSS---------------------C
T ss_pred EEEEEEEEEEEEEcCCCc-EEEEEEEC-----CccCCCeEEEECCCEEEEEEEECCCC---------------------C
Confidence 357788888888888777 78899998 99999999999999999999999987 7
Q ss_pred eEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhh-ccceEEEEEeCCC
Q 008840 144 TVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLL-AGLIGAYILRHPD 220 (551)
Q Consensus 144 t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~-~GL~G~~iV~dp~ 220 (551)
++|||||+++.+. +||+|. ++||+|.||++| +|.|+++ ++||||||||.. ...|+. +||+|++||++++
T Consensus 57 ~siH~HG~~~~~~~~~DGvp~--vtq~~I~PG~~~---~y~f~~~-~~Gt~wyH~H~~--~~~q~~~~Gl~G~liV~p~~ 128 (339)
T 2zwn_A 57 HTIHWHGVHQKGTWRSDGVPG--VTQQPIEAGDSY---TYKFKAD-RIGTLWYHCHVN--VNEHVGVRGMWGPLIVDPKQ 128 (339)
T ss_dssp BCCEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECC-SCEEEEEECCSS--HHHHTTTSCCEEEEEEECSS
T ss_pred ccEEeCCCCcCCCcccCCCCc--cccCccCCCCeE---EEEEECC-CCEEEEEEecCC--chhhhhcCCceEeEEecCCC
Confidence 9999999999988 999998 789999999999 9999996 899999999985 456888 9999999999543
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCc---eeecC-eEEEEEEE
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPR---MTVRR-RKYRFRII 296 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~---~~v~~-~~~RlRll 296 (551)
.. .++...++|++|+|+||.+...+.. ...+ .+...++.++|||+.+|. ++++. ++|||||+
T Consensus 129 -~~--~~~~~~d~e~~l~l~d~~~~~~~~~--~~~g---------~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrli 194 (339)
T 2zwn_A 129 -PL--PIEKRVTKDVIMMMSTWESAVADKY--GEGG---------TPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFF 194 (339)
T ss_dssp -CC--TTGGGCSEEEEEEEEEECGGGTTCT--TCCC---------STTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEE
T ss_pred -cc--cccccCCceEEEEeeheeccccccc--CCCC---------CCccccceEEEccccCCCcccEEECCCCEEEEEEE
Confidence 22 2333347899999999975322211 0000 011236899999999876 78887 89999999
Q ss_pred ecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 297 NASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 297 Nas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|+|+. .+.||| +||.|+||+.||.+++.|..+|++.|+||||+||+|+++++ | .|.+....
T Consensus 195 N~~~~-~h~~hl-hGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~p-G-~w~~hch~ 255 (339)
T 2zwn_A 195 GAGGG-IHAMHS-HGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADNP-G-RFIFHDHV 255 (339)
T ss_dssp ECSSS-CEEEEE-TTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCSC-S-EEEEEECC
T ss_pred eCCCc-eEEEEE-CCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCCC-e-eEEEEEec
Confidence 99955 889999 79999999999999867899999999999999999999875 4 68777653
No 22
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=8.9e-44 Score=368.77 Aligned_cols=305 Identities=18% Similarity=0.155 Sum_probs=223.6
Q ss_pred CCCccccccCCCCccccceec-cCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEE
Q 008840 36 LKLEMFVDELPDMPKIKGYYA-ANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVT 114 (551)
Q Consensus 36 ~~~~~~~~~lp~pp~~~~~~~-~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~ 114 (551)
..|++|.++|++||.+.+... ..+..+..++++.+.+.++++.++...+.+|+|| |++|||+|++++||+|+|+
T Consensus 4 ~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~n-----g~~pgP~i~v~~Gd~v~v~ 78 (336)
T 1oe1_A 4 DKLPHTKVTLVAPPQVHPHEQATKSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFN-----GSMPGPTLVVHEGDYVQLT 78 (336)
T ss_dssp GGSCEEECCCCCTTSCCCCCSSCCCCCCEEEEEEEEEEEEEECSTTCCEEEEEEET-----TBSSCCCEEEETTCEEEEE
T ss_pred cccccccccccCCCCCCcccccccCCCcEEEEEEEEEEEEEEECCCCcEEEEEEEC-----CccCCCeEEEcCCCEEEEE
Confidence 468999999999999865221 1111112478888889999998855578999998 9999999999999999999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEE
Q 008840 115 WQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWY 194 (551)
Q Consensus 115 l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wY 194 (551)
|+|++... .++++|+||.. ..||.+. +++ |.||++| +|+|+++ ++|||||
T Consensus 79 ~~N~~~~~-------------------~~h~~~~h~~~---~~~~~~~--~~~--i~pG~~~---~y~f~~~-~~Gt~~y 128 (336)
T 1oe1_A 79 LVNPATNA-------------------MPHNVDFHGAT---GALGGAK--LTN--VNPGEQA---TLRFKAD-RSGTFVY 128 (336)
T ss_dssp EEECTTCC-------------------SCBCCEETTSC---SGGGGGG--GCC--BCTTEEE---EEEEECC-SCEEEEE
T ss_pred EEcCCCCC-------------------ccccceECCCC---CCCCCcc--eEE--eCCCCEE---EEEEECC-CCeEEEE
Confidence 99997531 15778888753 2344443 454 8999999 9999996 7999999
Q ss_pred eccCCCchhhhhhccceEEEEEeCCCC-CCCCCCCCCCcCceeEEEEEeeec--CCCceE-ecCCCCCCCCCCCCCCccC
Q 008840 195 HDHTMGLTRVNLLAGLIGAYILRHPDV-EAPLRLPSGDVFDRPLFVFDRNFL--TNGSIY-MNSTGNNPSIHPQWQPEYF 270 (551)
Q Consensus 195 H~H~~g~t~~qv~~GL~G~~iV~dp~~-~~~~~lP~~~~~e~~lvl~d~~~~--~~g~~~-~~~~g~~~~~~~~~~~~~~ 270 (551)
|||.++.+..|+++||+|+|||++++. .++.+.|..+++|++|+++||++. ++|++. |...+........++.+..
T Consensus 129 H~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 208 (336)
T 1oe1_A 129 HCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLT 208 (336)
T ss_dssp ECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTC
T ss_pred ecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccccCCceeecccccccccchhhHhhcCC
Confidence 999999999999999999999995431 123334545688899999999874 455542 1100000000000112356
Q ss_pred CceEEECCcc-----cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceE-ecEEEEccCceEEE
Q 008840 271 GDVIVVNGKA-----WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVV-TNDTVLAPAEIADV 343 (551)
Q Consensus 271 gd~~lVNG~~-----~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~-~~~l~l~pgeR~dV 343 (551)
++.++|||+. .|.++|++ +++ ||+|++..+.+++++.+||.|+|++ ||+++..|.. ++++.|+||||+||
T Consensus 209 ~~~~liNG~~~~~~~~~~l~v~~Gerv--Rlin~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dv 285 (336)
T 1oe1_A 209 PSHIVFNGKVGALTGANALTAKVGETV--LLIHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAA 285 (336)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTCEE--EEEEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred CCEEEECCeeccCCCCcceEcCCCCEE--EEEecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEE
Confidence 8999999998 47899988 655 5678888887777776899999997 9999966654 79999999999999
Q ss_pred EEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC
Q 008840 344 VIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR 387 (551)
Q Consensus 344 lv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~ 387 (551)
+|+++++ | +|.+.+...... ...+.+..|+|.+..
T Consensus 286 lv~~~~p-G-~y~~~~h~~~~~-------~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 286 LYTFKQP-G-VYAYLNHNLIEA-------FELGAAGHIKVEGKW 320 (336)
T ss_dssp EEECCSC-E-EEEEEESSHHHH-------HTTSCEEEEEEESCC
T ss_pred EEEcCCC-c-eEEEEechhhcc-------ccCCCeEEEEECCCC
Confidence 9999984 4 899887641100 012357788887654
No 23
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.1e-44 Score=409.25 Aligned_cols=214 Identities=16% Similarity=0.124 Sum_probs=158.9
Q ss_pred CCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC------cceeccc
Q 008840 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK------SWFTAGF 169 (551)
Q Consensus 96 g~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~------~~~t~~~ 169 (551)
+++|||+|||++||+|+|+|+|+|+. +|+|||||+++++.+||+|. ..++||+
T Consensus 70 ~~~pGP~Ir~~~GD~v~V~v~N~l~~---------------------~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~ 128 (742)
T 2r7e_A 70 MGLLGPTIQAEVYDTVVITLKNMASH---------------------PVSLHAVGVSYWKASEGAEYDDQTSQREKEDDK 128 (742)
T ss_dssp TTTSEEEEEECSEEEEECCEECCSSS---------------------CCCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSS
T ss_pred cCCcCCeEEEECCCEEEEEEEECCCC---------------------CEeEEecCcccCccccCCccCCCCcccccccCc
Confidence 37999999999999999999999987 89999999999988888874 2378999
Q ss_pred cCCCCCcceeeEEEEcCc---------cCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEE
Q 008840 170 EEKGPTWTNETYHYHNMQ---------QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~---------~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~ 240 (551)
|.||++| +|+|++.+ ++||||||||.+ +..|+++||+|+|||+++. ......... .+|++|+++
T Consensus 129 I~PG~s~---tY~f~v~~~~gP~~~d~~~GT~wYHsH~~--~~~q~~~GL~G~lIV~~~~-~~~~~~~~~-~~e~~l~~~ 201 (742)
T 2r7e_A 129 VFPGGSH---TYVWQVLKENGPMASDPLCLTYSYLSHVD--LVKDLNSGLIGALLVCREG-SLAKEKTQT-LHKFILLFA 201 (742)
T ss_dssp CCTTCEE---CCEEEECGGGSCCSSSCSSCCEEECCCSC--SHHHHHHHCCEEEEECSSS-CTTTTTTTC-CCEECCCEE
T ss_pred CCCCCeE---EEEEEeccccCCCcCCCCcEEEEEccCCC--hHHHhhCCcEEEEEEecCc-ccCcccCce-eeEEEEEee
Confidence 9999999 99999854 469999999995 3569999999999999765 211111111 378888887
Q ss_pred EeeecCCCceEecCCCCC-CCCCCCCCCccCCceEEECCccc---CceeecC-eEEEEEEEecCCCc-eEEEEEcCCceE
Q 008840 241 DRNFLTNGSIYMNSTGNN-PSIHPQWQPEYFGDVIVVNGKAW---PRMTVRR-RKYRFRIINASNAR-FFRFFFTNGLRF 314 (551)
Q Consensus 241 d~~~~~~g~~~~~~~g~~-~~~~~~~~~~~~gd~~lVNG~~~---P~~~v~~-~~~RlRllNas~~~-~~~l~l~~g~~~ 314 (551)
++ +++.+.+....... ....+. ......+.++|||+.+ |.+.+++ ++|||||+|+|+.. .+.||| +||.|
T Consensus 202 ~~--de~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hl-hGh~f 277 (742)
T 2r7e_A 202 VF--DEGKSWHSETKNSLMQDRDAA-SARAWPKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFL-EGHTF 277 (742)
T ss_dssp CC--CCSSSSCCCCCC-------CC-SCCCCCCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCC-TTCCC
T ss_pred cc--cCCccccccccccccccCCCc-cccccCceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEE-CCCEE
Confidence 63 32222211100000 000000 0011256789999985 6788888 89999999999765 678888 79999
Q ss_pred EEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC
Q 008840 315 IHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES 350 (551)
Q Consensus 315 ~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~ 350 (551)
+|++ ..+|++.|.||++++|++.++++
T Consensus 278 ~Vvg---------~~~Dtv~v~Pg~~~~v~~~~~~p 304 (742)
T 2r7e_A 278 LVRN---------HRQASLEISPITFLTAQTLLMDL 304 (742)
T ss_dssp EETT---------EECCSCCCCTTCCCEEEECCCSC
T ss_pred EEEe---------EecceEEeCCCcEEEEEEEeCCC
Confidence 9984 24678888899999998888653
No 24
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=3.1e-43 Score=358.36 Aligned_cols=178 Identities=21% Similarity=0.325 Sum_probs=141.3
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
+++|.+.+. ....|+|+....||++||||||+++||+|+|+|+|+|+. +|
T Consensus 31 ~~~~~a~~~---------~~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~---------------------~~ 80 (299)
T 3t9w_A 31 RITMYAEKI---------SDELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDR---------------------VL 80 (299)
T ss_dssp EEEEEEEEE---------ETTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSS---------------------CB
T ss_pred EEEEEEEec---------CCCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCC---------------------Cc
Confidence 567666554 234588987788999999999999999999999999998 89
Q ss_pred EEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcC------------ccCceeEEeccCCCc--hhhhhhccc
Q 008840 145 VVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNM------------QQPGNTWYHDHTMGL--TRVNLLAGL 210 (551)
Q Consensus 145 ~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~------------~~~Gt~wYH~H~~g~--t~~qv~~GL 210 (551)
||||||+++++.+||++ +++|+|.||++| +|+|.+. +++||||||||.++. +..|+++||
T Consensus 81 siH~HG~~~~~~~DG~~---~~~~~i~PG~t~---~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL 154 (299)
T 3t9w_A 81 SLHPHGVDYDVNSDGTL---MNGSAVMPGQTR---RYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGL 154 (299)
T ss_dssp CCEESSSBCCGGGSCCT---TTTCCBCTTCEE---EEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTC
T ss_pred cEEeCCcccCCccCCCc---cccCccCCCCeE---EEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccc
Confidence 99999999999999986 578899999999 9999874 368999999999874 456999999
Q ss_pred eEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCceeecC-e
Q 008840 211 IGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-R 289 (551)
Q Consensus 211 ~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~-~ 289 (551)
+|+|||+++. + +. .++|++|+++||.++.. .. + ..|.++++. +
T Consensus 155 ~G~liV~~~~-~-----~~-~d~e~~l~~~~~~~Ng~--~~-------------------~--------~~p~l~v~~Ge 198 (299)
T 3t9w_A 155 YGALVVRRQG-D-----LL-PKRQFTVVFNDMMINNR--AH-------------------H--------DAPTFEANLGE 198 (299)
T ss_dssp EEEEEEECTT-C-----CC-CSEEEEEEEETTEETTC--CT-------------------T--------CCCEEEEETTC
T ss_pred cceEEEeccc-c-----cC-ccccceeeeeeeeecCc--cc-------------------c--------ccccceecCCC
Confidence 9999999655 2 11 27899999887654321 10 0 124567776 8
Q ss_pred EEEEEEEecCCCceEEEEEcCCceEEE
Q 008840 290 KYRFRIINASNARFFRFFFTNGLRFIH 316 (551)
Q Consensus 290 ~~RlRllNas~~~~~~l~l~~g~~~~v 316 (551)
++||||+|++.. ...||| +|+.|++
T Consensus 199 ~Vr~~liN~~~~-~HpfHl-HGh~F~v 223 (299)
T 3t9w_A 199 RVEWIAIGHGSN-FHTFHL-HGHRWLD 223 (299)
T ss_dssp EEEEEEEEESSC-CCEEEE-TTCCEES
T ss_pred EEEEEEEecccc-ceeeeE-ecceEEE
Confidence 999999998854 356777 7888753
No 25
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=4.1e-42 Score=356.86 Aligned_cols=302 Identities=16% Similarity=0.077 Sum_probs=212.0
Q ss_pred CCCCCccccccCCC----CccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCC
Q 008840 34 NPLKLEMFVDELPD----MPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGI 109 (551)
Q Consensus 34 ~~~~~~~~~~~lp~----pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd 109 (551)
+...|+++..+|.. ||.+++... .+. ..++++.+.+.++++.++...+.+|+|| |++|||+|++++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~--~~~~~l~~~~~~~~~~~dg~~~~~~~~n-----g~~pgP~i~v~~Gd 79 (340)
T 2bw4_A 8 DISTLPRVKVDLVKPPFVHAHDQVAKT-GPR--VVEFTMTIEEKKLVIDREGTEIHAMTFN-----GSVPGPLMVVHEND 79 (340)
T ss_dssp CGGGSCEEECCCCCTTSCCCCCSBCSS-SCC--EEEEEEEEEEEEEECSTTCCEEEEEEET-----TBSSCCEEEEETTC
T ss_pred cccccceeeeeeecCCCCCcccccccC-CCc--EEEEEEEEEEEEEEECCCCcEEEEEEEC-----CCCCCCcEEEcCCC
Confidence 45557777766544 444433222 222 2468888889989998755578899997 99999999999999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCc
Q 008840 110 DTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQ 187 (551)
Q Consensus 110 ~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~ 187 (551)
+|+|+|+|.+ +++||||++.... .||++ .+++ |.||+++ +|+|+++
T Consensus 80 ~v~v~~~N~~------------------------~~~~~hg~~~~~~~~~~~~~--~~~~--i~PG~~~---~y~~~~~- 127 (340)
T 2bw4_A 80 YVELRLINPD------------------------TNTLLHNIDFHAATGALGGG--ALTQ--VNPGEET---TLRFKAT- 127 (340)
T ss_dssp EEEEEEEECT------------------------TCCSCBCCEETTSCSGGGGG--GGCC--BCTTEEE---EEEEECC-
T ss_pred EEEEEEEeCC------------------------CCCccCcceeCCcCCCCCCc--cceE--eCCCCEE---EEEEECC-
Confidence 9999999985 3355565554432 22332 2454 9999999 9999997
Q ss_pred cCceeEEeccCCCchhhhhhccceEEEEEeCCCC-CCCCCCCCCCcCceeEEEEEeee--cCCCceE-ecCCCCCCCCCC
Q 008840 188 QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDV-EAPLRLPSGDVFDRPLFVFDRNF--LTNGSIY-MNSTGNNPSIHP 263 (551)
Q Consensus 188 ~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~-~~~~~lP~~~~~e~~lvl~d~~~--~~~g~~~-~~~~g~~~~~~~ 263 (551)
++||||||||.++.+..|+++||+|+|||++++. .+..+.|..+++|++|+++||++ +.+|.+. +...+.......
T Consensus 128 ~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~ 207 (340)
T 2bw4_A 128 KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAV 207 (340)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHH
T ss_pred CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeeccccCCcccccccccccccchh
Confidence 6999999999999999999999999999996531 11222343457889999999987 4556542 100000000000
Q ss_pred CCCCccCCceEEECCccc-----CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCce-EecEEEEc
Q 008840 264 QWQPEYFGDVIVVNGKAW-----PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPV-VTNDTVLA 336 (551)
Q Consensus 264 ~~~~~~~gd~~lVNG~~~-----P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~-~~~~l~l~ 336 (551)
.+..+..++.++|||+.+ |.+++++ +++| |+|+++++.+++++.+||.|+|++ ||+++..|. .++++.|+
T Consensus 208 ~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~R--l~n~~~~~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~ 284 (340)
T 2bw4_A 208 KAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVL--VVHSQANRDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIP 284 (340)
T ss_dssp HHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEE--EEEEESSSCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBC
T ss_pred hHhhcCCCCEEEECCccCCccCCCceEcCCCCEEE--EEECCCCCccceEEecCcceEEeC-CCcccCCccccceEEEeC
Confidence 011134578999999996 7899988 6665 556666666666655899999996 999997776 48999999
Q ss_pred cCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC
Q 008840 337 PAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR 387 (551)
Q Consensus 337 pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~ 387 (551)
||||+||+|+++++ | .|.+++..... ....+....|+|.+..
T Consensus 285 pGer~~v~v~~~~p-G-~y~~~~h~~~~-------h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 285 GGTAGAAFYTFRQP-G-VYAYVNHNLIE-------AFELGAAGHFKVTGEW 326 (340)
T ss_dssp TTEEEEEEEECCSC-E-EEEEEESSHHH-------HHTTSCEEEEEEESCC
T ss_pred CCceEEEEEECCCC-e-eeEEEcCchHH-------HHhCCCEEEEEECCCC
Confidence 99999999999984 4 89988754210 0012346678887644
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.4e-41 Score=365.01 Aligned_cols=289 Identities=18% Similarity=0.198 Sum_probs=220.1
Q ss_pred CCccccccCCCCcccccee-ccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYY-AANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTW 115 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~-~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l 115 (551)
.++++...|..||.+.+.. ...+. ..++++.+.+.++++.++. .+.+|+|| |++|||+|++++||+|+|+|
T Consensus 3 ~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pgp~i~v~~Gd~v~v~~ 74 (442)
T 2zoo_A 3 NLKTEQAILTPPPMVPPAINRDHSA--KVVINLETREQVGRIADGV-EYVFWSFG-----ETVPGSFIRVREGDEIEFNL 74 (442)
T ss_dssp -CCEEECCCBCTTCCCCCCCCSSCC--EEEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCBEEEETTCEEEEEE
T ss_pred CCcchhhhcccCCCCCCCcccCCCc--EEEEEEEEEEEEEEcCCCc-EEEEEEEC-----CcCCCCcEEEeCCCEEEEEE
Confidence 4666777776666654321 12232 2467777888888876655 68899998 99999999999999999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEe
Q 008840 116 QNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYH 195 (551)
Q Consensus 116 ~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH 195 (551)
+|.|+.. .++++||||++. +||.++. + .|.||+++ +|+|+++ ++||||||
T Consensus 75 ~N~l~~~-------------------~~~~iH~HG~~~---~dG~~~~--~--~i~pg~~~---~y~f~~~-~~Gt~~yH 124 (442)
T 2zoo_A 75 SNHPSSK-------------------MPHNIDLHAVTG---PGGGAES--S--FTAPGHTS---TFNFKAL-NPGLYIYH 124 (442)
T ss_dssp EECTTCS-------------------SCBCCEETTCCS---GGGGGGG--C--CBCTTCEE---EEEEECC-SCEEEEEE
T ss_pred EECCCCC-------------------CCCCEEecCCcC---CCCCCcc--E--EECCCCEE---EEEEEcC-CCeEEEEe
Confidence 9998741 179999999874 6888762 2 48999999 9999996 79999999
Q ss_pred ccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCC-CceEecCCCCCCCCCCCCCCccCCceE
Q 008840 196 DHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTN-GSIYMNSTGNNPSIHPQWQPEYFGDVI 274 (551)
Q Consensus 196 ~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~-g~~~~~~~g~~~~~~~~~~~~~~gd~~ 274 (551)
||.++ +..|+++||+|+|||++++ .+|. +++|++|+++||+++.+ +........ .....+..++.+
T Consensus 125 ~H~~~-~~~~~~~Gl~G~~iv~~~~-----~~~~-~d~e~~l~l~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 191 (442)
T 2zoo_A 125 CATAP-VGMHIANGMYGLILVEPKE-----GLAP-VDREYYLVQGDFYTKGEFGEAGLQPFD------MAKAIDEDADYV 191 (442)
T ss_dssp CCCSS-HHHHHHTTCEEEEEEECTT-----CCCC-CSEEEEEEEEEECBSSCTTCCEEECBC------HHHHHTTCCSEE
T ss_pred cCCCC-hHHHHhCccEEEEEEeCCC-----CCCC-CCceEEEEeeeeeccCcccccccccCC------hhHhccCCCCEE
Confidence 99976 7789999999999999443 2344 38899999999987654 221100000 000112457899
Q ss_pred EECCccc-----CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 275 VVNGKAW-----PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 275 lVNG~~~-----P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
+|||+.+ +.+++++ ++|||||+|+|+.+.+.|+| +||.|++|+.||++++ |..++++.|+||||+||+|+++
T Consensus 192 liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i-~g~~~~vi~~DG~~~~-p~~~~~~~l~pg~r~~v~v~~~ 269 (442)
T 2zoo_A 192 VFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHV-IGEIFDTVYVEGGSLK-NHNVQTTLIPAGGAAIVEFKVE 269 (442)
T ss_dssp EETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEE-ETCCBSEEEGGGSSCE-ECSBSEEEECTTEEEEEEEECC
T ss_pred EECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEE-cCCEEEEEecCCccCC-CccceEEEECCCeeEEEEEEcC
Confidence 9999987 4688887 89999999999989999999 5999999999999994 9999999999999999999999
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR 387 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~ 387 (551)
+. ++|.++....... ...+.+..|+|.+..
T Consensus 270 ~~--G~y~~~~~~~~~~-------~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 270 VP--GTFILVDHSIFRA-------FNKGALAMLKVEGPD 299 (442)
T ss_dssp SC--EEEEEEESSTHHH-------HTTSCEEEEEEESCC
T ss_pred CC--CeEEEEecccccc-------cccCceEEEEecCCC
Confidence 74 4899987542110 012356777776643
No 27
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=3e-41 Score=349.32 Aligned_cols=298 Identities=15% Similarity=0.133 Sum_probs=209.0
Q ss_pred CCccccccCCCCccccce---eccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEE
Q 008840 37 KLEMFVDELPDMPKIKGY---YAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYV 113 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~---~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v 113 (551)
.++++...|..|+.+.+. ....+.. .++++.+.+.++++.++. .+.+|+|| |++|||+|++++||+|+|
T Consensus 5 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pgP~i~~~~Gd~v~v 76 (333)
T 1mzy_A 5 NLPRVKHTLVPPPFAHAHEQVAASGPVI--NEFEMRIIEKEVQLDEDA-YLQAMTFD-----GSIPGPLMIVHEGDYVEL 76 (333)
T ss_dssp TSCEEECCCCCTTSBCSCCSSCSSSCCE--EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEE
T ss_pred ccceeeeeeccCCCCCccccccCCCCcE--EEEEEEEEEEEEEcCCCc-EEEEEEEC-----CccCCCcEEecCCCEEEE
Confidence 355666555544332210 1122332 467777888888886555 68899997 999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCce
Q 008840 114 TWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGN 191 (551)
Q Consensus 114 ~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt 191 (551)
+++|. .+++||||++.... .||.+. +++ |.||+++ +|+|+++ ++||
T Consensus 77 ~~~N~------------------------~~~~h~Hg~~~~~~~~~~~~~~--~~~--i~PG~~~---~y~f~~~-~~Gt 124 (333)
T 1mzy_A 77 TLINP------------------------PENTMPHNIDFHAATGALGGGG--LTL--INPGEKV---VLRFKAT-RAGA 124 (333)
T ss_dssp EEEEC------------------------TTCCSCBCCEETTSCSGGGGGG--GCC--BCTTEEE---EEEEECC-SCEE
T ss_pred EEEEC------------------------CCCcccccceecCCCCCCCCCc--eeE--eCCCCEE---EEEEECC-CCEE
Confidence 99998 47899999987764 333333 554 9999999 9999996 7999
Q ss_pred eEEeccCCC-chhhhhhccceEEEEEeCCCC-CCCCCCCCCCcCceeEEEEEeee--cCCCceE-ecCCCCCCCCCCCCC
Q 008840 192 TWYHDHTMG-LTRVNLLAGLIGAYILRHPDV-EAPLRLPSGDVFDRPLFVFDRNF--LTNGSIY-MNSTGNNPSIHPQWQ 266 (551)
Q Consensus 192 ~wYH~H~~g-~t~~qv~~GL~G~~iV~dp~~-~~~~~lP~~~~~e~~lvl~d~~~--~~~g~~~-~~~~g~~~~~~~~~~ 266 (551)
||||||.++ .+..|+++||+|+|||++++. .++.+.|..+++|++|+++||++ +.+|++. +...+........++
T Consensus 125 ~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 204 (333)
T 1mzy_A 125 FVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVM 204 (333)
T ss_dssp EEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHH
T ss_pred EEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCccccccccccccccccccchhHHh
Confidence 999999987 788899999999999995431 12233454458899999999988 4455542 110000000000011
Q ss_pred CccCCceEEECCccc-----CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceE-ecEEEEccCc
Q 008840 267 PEYFGDVIVVNGKAW-----PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVV-TNDTVLAPAE 339 (551)
Q Consensus 267 ~~~~gd~~lVNG~~~-----P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~-~~~l~l~pge 339 (551)
.+..++.++|||+.+ +.++|++ +++||| |+++++.+++++.++|.|+||+ ||++++.|.. ++++.|+|||
T Consensus 205 ~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~--n~~~~~~~~~h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGe 281 (333)
T 1mzy_A 205 DTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFV--HSQPNRDSRPHLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGT 281 (333)
T ss_dssp TTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEE--EEESSSCBCEEEETCCEEEEET-TCCTTSCCEEEESBCCBCTTE
T ss_pred hccCCcEEEECCcccccCCCcceEecCCCEEEEE--ECCCCCccccEEECCCCeEEEe-CCcccCCCccCcceEEECCCc
Confidence 234589999999985 4488988 666655 5555555555655899999998 9999977764 8999999999
Q ss_pred eEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccC
Q 008840 340 IADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKN 386 (551)
Q Consensus 340 R~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~ 386 (551)
|+||+|+++++ | +|.+.+...... ...+....|+|.+.
T Consensus 282 r~~v~v~a~~p-G-~y~~~ch~~~h~-------~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 282 AGAALYKFLQP-G-VYAYVNHNLIEA-------VHKGATAHVLVEGE 319 (333)
T ss_dssp EEEEEEECCSC-E-EEEEEESSHHHH-------HTTCCEEEEEEESC
T ss_pred eEEEEEEcCCC-E-EEEEecChhhhH-------hhCCCEEEEEEcCC
Confidence 99999999974 4 888887532110 01234566888754
No 28
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=4e-40 Score=386.09 Aligned_cols=240 Identities=19% Similarity=0.230 Sum_probs=182.0
Q ss_pred EEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCC
Q 008840 72 EKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG 151 (551)
Q Consensus 72 ~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~ 151 (551)
.+...+.++. .+++|+ ++||||||+++||+|+|+|+|+|++ +|+|||||+
T Consensus 75 ~~~~~~~~~~-~~~~w~--------~~PGP~Ir~~~GD~v~v~v~N~l~~---------------------~tsiHwHGl 124 (1065)
T 2j5w_A 75 YTDETFRTTI-EKPVWL--------GFLGPIIKAETGDKVYVHLKNLASR---------------------PYTFHSHGI 124 (1065)
T ss_dssp ESSSSTTSBC-CCCGGG--------TTSCCCEEEETTCEEEEEEEEESSS---------------------CBCCEESSS
T ss_pred ecceeecCCc-cccccc--------CCcCCeEEEeCCeEEEEEEEECCCC---------------------CeeEEeCCc
Confidence 3334576666 567775 6999999999999999999999997 899999999
Q ss_pred CCCCCCCCCC--Cc----ceeccccCCCCCcceeeEEEEcCcc---------CceeEEeccCCCchhhhhhccceEEEEE
Q 008840 152 IDEPESDGYA--KS----WFTAGFEEKGPTWTNETYHYHNMQQ---------PGNTWYHDHTMGLTRVNLLAGLIGAYIL 216 (551)
Q Consensus 152 ~~~~~~DG~p--~~----~~t~~~i~pG~~~~~~~y~f~~~~~---------~Gt~wYH~H~~g~t~~qv~~GL~G~~iV 216 (551)
++++.+||+| +. .+++|+|+||++| +|+|++.++ +||||||||.+ +..|+++||+|+|||
T Consensus 125 ~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~---tY~f~~~~~~gp~~~d~~aGT~wYHsH~~--~~~qv~~GL~G~lIV 199 (1065)
T 2j5w_A 125 TYYKEHEGAIYPDNTTDFQRADDKVYPGEQY---TYMLLATEEQSPGEGDGNCVTRIYHSHID--APKDIASGLIGPLII 199 (1065)
T ss_dssp BCCGGGCCCCSCCCCCGGGTGGGCBCTTCEE---EEEEECCSTTSCCTTSCSEEEEEEECCSS--HHHHHHHTCEEEEEE
T ss_pred cCCcccCCcccCCCCCcccccccccCCCCEE---EEEEEeccccCCccCCCCceEEEEEeccC--chhHhhCccEEEEEE
Confidence 9998888874 22 2678999999999 999999865 49999999997 456899999999999
Q ss_pred eCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecC----CCCCCCCCCCCCCc--cCCceEEECCcc---cCceeec
Q 008840 217 RHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNS----TGNNPSIHPQWQPE--YFGDVIVVNGKA---WPRMTVR 287 (551)
Q Consensus 217 ~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~----~g~~~~~~~~~~~~--~~gd~~lVNG~~---~P~~~v~ 287 (551)
++++ ...++.+...++|++|+|+|+. .+++.+... ....+......... ..++.++|||+. .|.++++
T Consensus 200 ~~~~-~~~~p~~~~~d~e~~l~l~d~d--~~~~w~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~iNG~~~~~~~~l~v~ 276 (1065)
T 2j5w_A 200 CKKD-SLDKEKEKHIDREFVVMFSVVD--ENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGYTFGSLSGLSMC 276 (1065)
T ss_dssp ECTT-CBSSSSBTTCCEEEEEEEEEEE--GGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETTEETTCCCCCEEE
T ss_pred ecCc-ccCCCccCCCccceEEEeeeec--CCccccccchhhhhhcCccccccccccccccCcEEEECCccCCCCcceEEC
Confidence 9765 3222233344789999999843 222211000 00000000000000 135689999998 4788998
Q ss_pred C-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 288 R-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 288 ~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
+ ++|||||+|+|+. ..+.|+| +||.|++ +|..+|+|.|+||||+||+|+++++ | .|.++...
T Consensus 277 ~Ge~vRlRliNag~~~~~~~~~i-~Gh~f~v---------~p~~~dtv~I~pGer~dVlv~~~~p-G-~y~i~~h~ 340 (1065)
T 2j5w_A 277 AEDRVKWYLFGMGNEVDVHAAFF-HGQALTN---------KNYRIDTINLFPATLFDAYMVAQNP-G-EWMLSCQN 340 (1065)
T ss_dssp TTCEEEEEEEECSSTTCCEEEEE-TTCCEEE---------TTEEESEEEECBTCEEEEEEECCSC-E-EEEEEECS
T ss_pred CCCEEEEEEEcCCcccceeEEEE-cCCEEEE---------CCeeecEEEECCCcEEEEEEEeCCC-e-eEEEEecC
Confidence 8 8999999999976 6899999 7999992 5789999999999999999999984 4 89987653
No 29
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.2e-38 Score=326.88 Aligned_cols=231 Identities=21% Similarity=0.289 Sum_probs=182.8
Q ss_pred ccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCc
Q 008840 84 TPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKS 163 (551)
Q Consensus 84 ~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~ 163 (551)
...|+|+....||++|||+||+++||+|+|+|+|+|+. +|||||||+++++.+||+|.
T Consensus 25 ~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~---------------------~~siH~HG~~~~~~~dG~~~- 82 (313)
T 3tas_A 25 GGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDV---------------------PVSLHVHGLDYEISSDGTKQ- 82 (313)
T ss_dssp GGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSS---------------------CBCCEESSSBCCGGGSCSTT-
T ss_pred CCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCC---------------------CccEeecCCcCCccCCCCcc-
Confidence 45578887788999999999999999999999999998 89999999999999999984
Q ss_pred ceeccccCCCCCcceeeEEEEcC------------ccCceeEEeccCCCc--hhhhhhccceEEEEEeCCCCCCCCCCCC
Q 008840 164 WFTAGFEEKGPTWTNETYHYHNM------------QQPGNTWYHDHTMGL--TRVNLLAGLIGAYILRHPDVEAPLRLPS 229 (551)
Q Consensus 164 ~~t~~~i~pG~~~~~~~y~f~~~------------~~~Gt~wYH~H~~g~--t~~qv~~GL~G~~iV~dp~~~~~~~lP~ 229 (551)
++++|.||++| +|+|.+. +++||||||||.++. +..|+++||+|+|||+++. + +.
T Consensus 83 --~~~~i~PG~~~---~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~-~-----~~ 151 (313)
T 3tas_A 83 --SRSDVEPGGTR---TYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG-D-----VL 151 (313)
T ss_dssp --TTCCBCTTCEE---EEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT-C-----BC
T ss_pred --ccCCcCCCCEE---EEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccc-c-----cc
Confidence 67889999999 9999764 368999999999765 5678999999999999655 2 11
Q ss_pred CCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCceeecC-eEEEEEEEecCCCceEEEEE
Q 008840 230 GDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFF 308 (551)
Q Consensus 230 ~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~-~~~RlRllNas~~~~~~l~l 308 (551)
.|+|++|+++||.++.... ...|.++++. +++||||+|+++ ....|||
T Consensus 152 -~d~e~~l~~~d~t~Ng~~~-----------------------------~~~~~l~v~~Ge~vr~~liN~g~-~~hpfHl 200 (313)
T 3tas_A 152 -PDRTHTIVFNDMTINNRPA-----------------------------HTGPDFEATVGDRVEFVMITHGE-YYHTFHL 200 (313)
T ss_dssp -CSEEEEEEEETTEETTCCT-----------------------------TCCCCEEEETTCEEEEEEEEESS-CCEEEEE
T ss_pred -ccccceeeccchhcccCCc-----------------------------ccccccccccCCEEEEEEecccc-cceeeee
Confidence 2889999999986542210 0124567776 899999999995 4677888
Q ss_pred cCCceEEEEEcCCCCCC--CceEecEEEEccCceEEEEEEcCCCC-CceEEEecCCCCCCCCCCCCCCCCCceEEEEEcc
Q 008840 309 TNGLRFIHVGSDSAYLG--KPVVTNDTVLAPAEIADVVIDFSEST-SDVAILANDAPYPYPAGNPVNDANGKVMKFIILK 385 (551)
Q Consensus 309 ~~g~~~~via~DG~~l~--~P~~~~~l~l~pgeR~dVlv~~~~~~-g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~ 385 (551)
+|+.|++++.||...+ .|..+|++.|.||||++++|.+.+.. -+.|.+......-. ..+-...|.|..
T Consensus 201 -HGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~--------~~GM~~~f~V~~ 271 (313)
T 3tas_A 201 -HGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS--------DMGMVGLFLVKK 271 (313)
T ss_dssp -TTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH--------HTTCEEEEEEEC
T ss_pred -cCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH--------HCCCeEEEEEEC
Confidence 7999999999987653 57889999999999999999876532 23777776431111 122455688876
Q ss_pred CC
Q 008840 386 NR 387 (551)
Q Consensus 386 ~~ 387 (551)
..
T Consensus 272 ~d 273 (313)
T 3tas_A 272 PD 273 (313)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 30
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=3.8e-38 Score=317.55 Aligned_cols=219 Identities=22% Similarity=0.311 Sum_probs=180.3
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.+|++.+.+. ....++|+....||++|||+||+++||+|+|+|+|+|+. +
T Consensus 8 ~~~~l~~~~~---------~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~---------------------~ 57 (276)
T 3kw8_A 8 RHLKMYAEKL---------ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDV---------------------R 57 (276)
T ss_dssp EEEEEEEEEC---------TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSS---------------------C
T ss_pred EEEEEEEEeC---------CCCceecceeccCCcccCCeEEEECCCEEEEEEEECCCC---------------------C
Confidence 3567666552 346678887788999999999999999999999999987 8
Q ss_pred eEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCc------------cCceeEEeccCCCch--hhhhhcc
Q 008840 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQ------------QPGNTWYHDHTMGLT--RVNLLAG 209 (551)
Q Consensus 144 t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~------------~~Gt~wYH~H~~g~t--~~qv~~G 209 (551)
++|||||+++++.+||+| +++|+|.||++| +|+|++.+ ++||||||||.++.+ ..|+++|
T Consensus 58 ~siH~HG~~~~~~~DG~~---~t~~~i~pG~~~---~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~G 131 (276)
T 3kw8_A 58 ASLHVHGLDYEISSDGTA---MNKSDVEPGGTR---TYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNG 131 (276)
T ss_dssp BCCEESSSBCCGGGSCCT---TTTCSBCTTCEE---EEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHT
T ss_pred ccEeecCcccCCccCCCc---CCcCCCCCCCEE---EEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCc
Confidence 999999999999999998 688999999999 99999975 379999999999876 5799999
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---Cceee
Q 008840 210 LIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---PRMTV 286 (551)
Q Consensus 210 L~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---P~~~v 286 (551)
|+|+|||+++. . . .. ++|++|+++|| +|||+.+ |.+.+
T Consensus 132 l~G~liV~~~~-~-~---~~--drE~~l~l~~~--------------------------------~iNG~~~~~~p~i~v 172 (276)
T 3kw8_A 132 LYGPVIVRRKG-D-V---LP--DATHTIVFNDM--------------------------------TINNRKPHTGPDFEA 172 (276)
T ss_dssp CEEEEEEECTT-C-C---CC--SEEEEEEEETT--------------------------------EETTCCTTCCCCEEE
T ss_pred cEEEEEEecCC-C-c---cc--ccceEEEeccc--------------------------------ccceecccCCCCEEE
Confidence 99999999654 2 1 11 77888876543 5667653 67888
Q ss_pred cC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCC---CCceEecEEEEccCceEEEEEEcCC--CCCceEEEecC
Q 008840 287 RR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYL---GKPVVTNDTVLAPAEIADVVIDFSE--STSDVAILAND 360 (551)
Q Consensus 287 ~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l---~~P~~~~~l~l~pgeR~dVlv~~~~--~~g~~~~L~~~ 360 (551)
+. +++||||+|.+. ....+|| ||+.|++++ ||... ..+..+|++.|.||+++++++.+.+ .+| .|.+...
T Consensus 173 ~~G~~vri~l~N~~~-~~Hp~Hl-HG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH 248 (276)
T 3kw8_A 173 TVGDRVEIVMITHGE-YYHTFHM-HGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCH 248 (276)
T ss_dssp ETTCEEEEEEEEESS-CCEEEEE-TTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEEC
T ss_pred ecCCEEEEEEecCCC-cceeEEE-ccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECC
Confidence 87 899999999997 4678888 899999875 77532 2346789999999999999999985 344 8888876
Q ss_pred C
Q 008840 361 A 361 (551)
Q Consensus 361 ~ 361 (551)
.
T Consensus 249 ~ 249 (276)
T 3kw8_A 249 V 249 (276)
T ss_dssp S
T ss_pred C
Confidence 3
No 31
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.1e-36 Score=327.27 Aligned_cols=365 Identities=15% Similarity=0.116 Sum_probs=227.3
Q ss_pred CCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCC
Q 008840 93 SLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEK 172 (551)
Q Consensus 93 ~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~p 172 (551)
.+||++ ||+|+|++||+|+|+|+|.+.. .+++||||... .++|.|.|
T Consensus 48 ~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~---------------------~h~~~~~g~~~-----------~~~~~i~p 94 (447)
T 2dv6_A 48 DIDHKI-NPTLVVHEGETVQVNLVNGEGA---------------------QHDVVVDQYAA-----------RSAIVNGK 94 (447)
T ss_dssp GGTTCB-SCCEEEETTCEEEEEEECSSSS---------------------CBCCEETTTTE-----------ECCCBCST
T ss_pred eecCCc-CCeEEEcCCCEEEEEEEcCCCC---------------------ceEEEEccCCc-----------ccceecCC
Confidence 346999 9999999999999999999876 68999998641 35678999
Q ss_pred CCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCC----CCCCCCCcCceeEEEEEeeecCCC
Q 008840 173 GPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAP----LRLPSGDVFDRPLFVFDRNFLTNG 248 (551)
Q Consensus 173 G~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~----~~lP~~~~~e~~lvl~d~~~~~~g 248 (551)
|+++ +|.|.+. ++||||||||.++ |..+||.|.|+|+++..... ..++.. ..+++..+ |+. ...
T Consensus 95 G~~~---~~~f~~~-~~Gt~~y~~~~~~----h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~-~~~~p~~~-d~~--~~~ 162 (447)
T 2dv6_A 95 NASS---TFSFVAS-KVGEFNYYCSIAG----HRQAGMEGNIQVLPGNRAEMKSSGADITRD-PADLPGPI-GPR--QAK 162 (447)
T ss_dssp TBEE---EEEEECC-SCEEEEEECCSTT----HHHHTCEEEEEEESSCCCCCCCSSBCCBCC-TTCSCCCC-CSC--CCC
T ss_pred CCeE---EEEEEcC-CCEEEEEEeCCCC----hhhCCCEEEEEEeCCccccCCCcchhhccC-hhhcCCcc-ccC--CCc
Confidence 9999 9999997 5899999999864 67899999999997652110 000000 11111111 100 000
Q ss_pred ceEecCCCCCCCCCCCCCCccCCceEEECCcc-cCceeecC-eEEEEEEEecCC-CceEEEEEcCCceEEEEEcCCCCCC
Q 008840 249 SIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA-WPRMTVRR-RKYRFRIINASN-ARFFRFFFTNGLRFIHVGSDSAYLG 325 (551)
Q Consensus 249 ~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~-~~~~~l~l~~g~~~~via~DG~~l~ 325 (551)
...+..... . .......+...+.+++||+. .|.+++++ ++|||||+|.+. ...+.+++ ||. ++.||.+
T Consensus 163 ~~~~~l~~~-~-~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~-Hg~----~~~DG~~-- 233 (447)
T 2dv6_A 163 TVRIDLETV-E-VKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDF-HGA----TGPGGAA-- 233 (447)
T ss_dssp EEEEEEEEE-E-EEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEE-TTC----CSGGGGG--
T ss_pred EEEEEEEEE-E-EEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEee-ccc----cCCCCCC--
Confidence 000000000 0 00000012234689999996 78999987 899999999985 45677888 673 3689873
Q ss_pred CceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCC-------C
Q 008840 326 KPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEK-------L 398 (551)
Q Consensus 326 ~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~-------L 398 (551)
+.+.|+||||+++++++++. ++|+++...... + .....+-.-.+.|.... .+|.. +
T Consensus 234 -----~~~~i~pG~~~~~~~~~~~~--G~~~yh~h~~~~---~--~~~~~Gl~g~l~v~~~~-----~~P~~d~~~~~~~ 296 (447)
T 2dv6_A 234 -----AFTQTDPGEETVVTFKALIP--GIYVYHCATPSV---P--THITNGMYGLLLVEPEG-----GLPQVDREFYVMQ 296 (447)
T ss_dssp -----GGCCBCTTCEEEEEEECCSC--EEEEEECCSSSH---H--HHHHTTCEEEEEEECTT-----CSCCCSEEEEEEE
T ss_pred -----ccEEeCCCCEEEEEEECCCC--eEEEEEeCCCCh---H--HHHhCCCEEEEEEeCCC-----CCCCCCeeEEEEe
Confidence 23469999999999999864 489998754100 0 00001112234443321 12210 0
Q ss_pred CCCCCCCCccCceeeEEeeeecccCCCCcceEEEcccccCCCC---C-CCcceeeeEEEEeee-eeeeeeccccCceeee
Q 008840 399 IEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPV---T-ETPKTLDQTELVNLE-EFKACMNKINDAIKCN 473 (551)
Q Consensus 399 ~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~~INg~~f~~~~---~-~~~~~~~~~~l~n~~-~~~~~~~~~~~~~~~~ 473 (551)
................+.+.... ...+..|+|||+.|.... . -.+...++|.|+|.. ...|++|.|+|.| .
T Consensus 297 ~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f--~ 372 (447)
T 2dv6_A 297 GEIYTVKSFGTSGEQEMDYEKLI--NEKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIF--D 372 (447)
T ss_dssp EEECBSSCTTCCEECCBBHHHHH--TTCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCE--E
T ss_pred cccccCCcccccccccCChHHhh--ccCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEE--E
Confidence 00000000000000000000000 112456899999886321 1 112237889999987 4678899999855 4
Q ss_pred eeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 474 LSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 474 v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+.. .+|....++ ..|+|||.|.||+++.|+|+++ +|| |++|||+++|++.|||..|+|.
T Consensus 373 vv~-~dG~~~~~p---~~~~dtv~l~pg~r~~i~~~~~--------------~pG~~~~hch~~~h~~~Gm~~~~~v~ 432 (447)
T 2dv6_A 373 HVY-SLGSVVSPP---LIGVQTVSVPPGGATIVDFKID--------------RAGRYILVDHALSRLEHGLVGFLNVD 432 (447)
T ss_dssp EEC-GGGCSSSCC---EEEESEEEECTTEEEEEEEECC--------------SCEEEEEEESSGGGGGGTCCEEEEEC
T ss_pred EEE-cCCcccCCC---cccccEEEECCCcEEEEEEECC--------------CCEEEEEEecCcCccccCCEEEEEEe
Confidence 443 356322211 1389999999999999999987 678 9999999999999999999884
No 32
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=2.7e-37 Score=346.45 Aligned_cols=223 Identities=17% Similarity=0.246 Sum_probs=164.8
Q ss_pred CCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcc------eecc
Q 008840 95 TASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSW------FTAG 168 (551)
Q Consensus 95 ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~------~t~~ 168 (551)
++++|||+|||++||+|+|+|+|.|+. +|+|||||+++++.+||+|... .++|
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~---------------------~~siH~HGl~~~~~~DG~~~~~~~~~~~~~~~ 121 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASR---------------------PYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDN 121 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSS---------------------CBCCEEETCC---------------------C
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCC---------------------ceEEecCcceeCCCCCCccccCCCCcccccCc
Confidence 468999999999999999999999987 8999999999999999998621 2388
Q ss_pred ccCCCCCcceeeEEEEcCcc-----Cc----eeEEeccCCCchhhhhhccceEEEEEeCCCCCC-CCCCCCCCcCceeEE
Q 008840 169 FEEKGPTWTNETYHYHNMQQ-----PG----NTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA-PLRLPSGDVFDRPLF 238 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~-----~G----t~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~-~~~lP~~~~~e~~lv 238 (551)
+|.||++| +|+|++.++ +| |||||||.+ +..|+++||+|+|||+++.... ...+|.. ++|++|+
T Consensus 122 ~I~PG~~~---tY~f~~~~~~gp~~~G~~c~T~wYHsH~~--~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~-~~e~~l~ 195 (647)
T 1sdd_B 122 AIQPNKTY---TYVWHATTRSGPENPGSACRAWAYYSAVN--PEKDIHSGLIGPLLICRKGTLDKETNMPVD-MREFVLL 195 (647)
T ss_dssp CBCTTCCE---ECCEECCTTTSCCSSSCSEEEEEEECCSS--HHHHHTTTCEEEEEEECTTSSCTTSCCCSS-CCEEEEE
T ss_pred ccCCCCeE---EEEEECCcccCCCCCCCCceEEEEccCCC--CcccccccCccCEEEeeCCCcccccCCCCc-ceeEEEE
Confidence 99999999 999999865 57 999999996 4679999999999999765221 1224554 6899999
Q ss_pred EEE------eeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc--CceeecC-eEEEEEEEecCCCc-eEEEEE
Q 008840 239 VFD------RNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW--PRMTVRR-RKYRFRIINASNAR-FFRFFF 308 (551)
Q Consensus 239 l~d------~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~--P~~~v~~-~~~RlRllNas~~~-~~~l~l 308 (551)
|+| |.++.++...+... ... .+..++.++|||+.+ |.+++++ ++|||||+|+++.+ .+.|||
T Consensus 196 l~~~d~~~~w~~~~~~~~~~~~~------~~~--~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hl 267 (647)
T 1sdd_B 196 FMVFDEKKSWYYDKKPTRSWRRA------SSE--VKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHF 267 (647)
T ss_dssp EEEEEGGGSSCCC-----------------------CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEE
T ss_pred EEeecCccccccccCcccccccC------Ccc--hhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEE
Confidence 995 33333322111000 000 123478999999986 8899987 89999999999875 788999
Q ss_pred cCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 309 TNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 309 ~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|||.|++|+.|| ..++++.|+||||+||+|+++++ | .|.+....
T Consensus 268 -hG~~f~vi~~d~------~~~d~v~l~pg~r~~v~~~~~~p-G-~w~~hch~ 311 (647)
T 1sdd_B 268 -HGQTLLENGTQQ------HQLGVWPLLPGSFKTLEMKASKP-G-WWLLDTEV 311 (647)
T ss_dssp -TTCCEEECSSSC------EEESSEEECTTEEEEEEEECCSS-E-EEEEECCC
T ss_pred -cCcEEEEecCCC------cccceEEECCCeEEEEEEEeccc-e-EeecccCc
Confidence 799999999885 47899999999999999999975 4 78877653
No 33
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.5e-37 Score=317.64 Aligned_cols=211 Identities=18% Similarity=0.150 Sum_probs=157.1
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcc----ee--c
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSW----FT--A 167 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~----~t--~ 167 (551)
.| ++|||+|||++||+|+|+|+|.|+. +++|||||+++++.+||+|... ++ +
T Consensus 54 ~n-~~pGP~I~v~~Gd~v~v~~~N~l~~---------------------~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~ 111 (306)
T 1sdd_A 54 TS-GLLGPTLYAEVGDIMKVHFKNKAHK---------------------PLSIHAQGIKYSKFSEGASYSDHTLPMEKMD 111 (306)
T ss_dssp SC-CSCCCCEEEETTCEEEEEEEECSSS---------------------CBCCEEESSCCCTTTSCCCSCCCCCHHHHTT
T ss_pred cC-CccCCEEEEeCCCEEEEEEEECCCC---------------------cccEeecceecccccCCCccCCCCcccccCC
Confidence 35 5999999999999999999999987 8999999999998999988521 12 5
Q ss_pred cccCCCCCcceeeEEEEcCccC---------ceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEE
Q 008840 168 GFEEKGPTWTNETYHYHNMQQP---------GNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLF 238 (551)
Q Consensus 168 ~~i~pG~~~~~~~y~f~~~~~~---------Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lv 238 (551)
|+|.||++| +|+|++.+++ ||||||||.. +..|+++||+|+|||+++......+.+...++|++|+
T Consensus 112 ~~I~PG~~~---~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~--~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~ 186 (306)
T 1sdd_A 112 DAVAPGQEY---TYEWIISEHSGPTHDDPPCLTHIYYSYVN--LVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLM 186 (306)
T ss_dssp TCBCTTCEE---EEEEECCGGGSCCSSSCSEEEEEEECCSS--SHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCB
T ss_pred CccCCCCeE---EEEEEeCCccCCCCCCCCceEEEEeccCC--chhhhccCceEEEEEccCCCCCccCCcCcccceEEEE
Confidence 899999999 9999997664 6999999974 3468999999999999764222223333347899999
Q ss_pred EEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---CceeecC-eEEEEEEEecCCC-ceEEEEEcCCce
Q 008840 239 VFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---PRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLR 313 (551)
Q Consensus 239 l~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~ 313 (551)
++|| +.+++.. ...++.++|||+.+ |.++++. +++||||+|+|+. ..+.||| ||+.
T Consensus 187 ~~d~--d~~~~~~----------------~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hl-hG~~ 247 (306)
T 1sdd_A 187 FAVF--DESKSWN----------------QTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHF-NGQV 247 (306)
T ss_dssp CCEE--ETTSSSS----------------CCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBC-SSTT
T ss_pred EEec--ccccccc----------------cCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEE-CCcE
Confidence 9996 4433221 01267899999997 8899988 8999999999987 5667999 7999
Q ss_pred EEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 314 FIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 314 ~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|.+ || ..+|++.|+||||+||+|+++++ | .|.+....
T Consensus 248 ~~~---dG------~~~dtv~l~pger~~v~~~~~~p-G-~~~~hch~ 284 (306)
T 1sdd_A 248 LEQ---NH------HKISAITLVSATSTTANMTVSPE-G-RWTIASLI 284 (306)
T ss_dssp CEE---TT------EECSCCCEETTCCBC---------C-CCCCBCCS
T ss_pred eee---CC------EEcceEEECCCcEEEEEEEcCCC-e-EEEEEeCC
Confidence 875 77 45899999999999999999864 4 67777654
No 34
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=9.6e-36 Score=308.61 Aligned_cols=219 Identities=23% Similarity=0.335 Sum_probs=174.9
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+. ...+|+|+....||++|||+|+|++||+|+|+|+|.++. +
T Consensus 49 ~~~~l~~~~~---------~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~---------------------~ 98 (343)
T 3cg8_A 49 RHLKMYAEKL---------ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDV---------------------R 98 (343)
T ss_dssp EEEEEEEEEC---------GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSS---------------------C
T ss_pred EEEEEEEEEc---------cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCC---------------------C
Confidence 3566665542 134699987777999999999999999999999999987 7
Q ss_pred eEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCc------------cCceeEEeccCCCch--hhhhhcc
Q 008840 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQ------------QPGNTWYHDHTMGLT--RVNLLAG 209 (551)
Q Consensus 144 t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~------------~~Gt~wYH~H~~g~t--~~qv~~G 209 (551)
++|||||+++...+||+| +++|.|.||++| +|.|++.+ ++||||||||.++.. ..|+++|
T Consensus 99 ~sih~HG~~~~~~~DG~~---~t~~~I~PG~~~---~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~G 172 (343)
T 3cg8_A 99 ASLHVHGLDYEISSDGTA---MNKSDVEPGGTR---TYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNG 172 (343)
T ss_dssp BCCEESSSBCCGGGSCCT---TTTCSBCTTCEE---EEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHT
T ss_pred eeEEecCcccCCcCCCcc---cccccccCCCEE---EEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcC
Confidence 999999999998899998 578899999999 99999864 358999999997653 4799999
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---Cceee
Q 008840 210 LIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---PRMTV 286 (551)
Q Consensus 210 L~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---P~~~v 286 (551)
|+|++||+++. +. .| ++|++|+++|| +|||+.+ |.+.+
T Consensus 173 l~G~~iV~~~~-~~---~p---d~e~~l~~~d~--------------------------------~iNG~~~~~~~~l~v 213 (343)
T 3cg8_A 173 LYGPVIVRRKG-DV---LP---DATHTIVFNDM--------------------------------TINNRKPHTGPDFEA 213 (343)
T ss_dssp CEEEEEEECTT-CC---CC---SEEEEEEEETT--------------------------------EETTCCTTCCCCEEE
T ss_pred CeEEEEEecCC-CC---CC---CceEEEEcccc--------------------------------eecccCCCCCccEEe
Confidence 99999999654 21 12 67888777654 4666653 56888
Q ss_pred cC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCC---CCceEecEEEEccCceEEEEEEcCC--CCCceEEEecC
Q 008840 287 RR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYL---GKPVVTNDTVLAPAEIADVVIDFSE--STSDVAILAND 360 (551)
Q Consensus 287 ~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l---~~P~~~~~l~l~pgeR~dVlv~~~~--~~g~~~~L~~~ 360 (551)
+. ++|||||+|.+. ....||| ||+.|+++ .||.+. ..+..+|++.|.||||++|++++.+ .+| .|.+...
T Consensus 214 ~~Ge~vri~l~N~g~-~~HpfHl-HGh~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCH 289 (343)
T 3cg8_A 214 TVGDRVEIVMITHGE-YYHTFHM-HGHRWADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCH 289 (343)
T ss_dssp ETTCEEEEEEEEESS-CCEEEEE-TTCCEESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEEC
T ss_pred CCCCEEEEEEEcCCc-cccccEe-cCcEEEEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCC
Confidence 87 899999999996 4677888 89999997 466532 2346689999999999999999853 344 7888765
Q ss_pred C
Q 008840 361 A 361 (551)
Q Consensus 361 ~ 361 (551)
.
T Consensus 290 i 290 (343)
T 3cg8_A 290 V 290 (343)
T ss_dssp S
T ss_pred C
Confidence 3
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=4.6e-35 Score=314.80 Aligned_cols=260 Identities=18% Similarity=0.194 Sum_probs=199.6
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
.+++.+.+....+..+. ...+|+|| |++|||+|++++||+++|+|+|.+... ..+
T Consensus 165 ~~~l~~~~~~~~~~~g~-~~~~~~~N-----G~~pgp~i~v~~G~~v~~rl~N~~~~~-------------------~~~ 219 (447)
T 2dv6_A 165 RIDLETVEVKGQLDDNT-TYTYWTFN-----GKVPGPFLRVRVGDTVELHLKNHKDSL-------------------MVH 219 (447)
T ss_dssp EEEEEEEEEEEEEETTE-EEEEEEET-----TBBSCCCEEEETTCEEEEEEEECTTCS-------------------SCB
T ss_pred EEEEEEEEEEEeccCCc-eeEEEEEC-----CccCCCeEEecCCCEEEEEEEeCCCCc-------------------eeE
Confidence 45555555555564443 56789997 999999999999999999999998631 169
Q ss_pred EEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCC
Q 008840 145 VVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAP 224 (551)
Q Consensus 145 ~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~ 224 (551)
++||||+. .+||+|+ .++ |.||+++ +|.|.++ ++||||||||.. .+..|+.+||+|+|+|+++.
T Consensus 220 ~ih~Hg~~---~~DG~~~--~~~--i~pG~~~---~~~~~~~-~~G~~~yh~h~~-~~~~~~~~Gl~g~l~v~~~~---- 283 (447)
T 2dv6_A 220 SVDFHGAT---GPGGAAA--FTQ--TDPGEET---VVTFKAL-IPGIYVYHCATP-SVPTHITNGMYGLLLVEPEG---- 283 (447)
T ss_dssp CCEETTCC---SGGGGGG--GCC--BCTTCEE---EEEEECC-SCEEEEEECCSS-SHHHHHHTTCEEEEEEECTT----
T ss_pred EEeecccc---CCCCCCc--cEE--eCCCCEE---EEEEECC-CCeEEEEEeCCC-ChHHHHhCCCEEEEEEeCCC----
Confidence 99999986 4789886 333 8999999 9999997 689999999984 46679999999999999543
Q ss_pred CCCCCCCcCceeEEEEEeeecCC----CceEecCCCCCCCCCCCCCCccCCceEEECCcccC-----ceeecC-eEEEEE
Q 008840 225 LRLPSGDVFDRPLFVFDRNFLTN----GSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP-----RMTVRR-RKYRFR 294 (551)
Q Consensus 225 ~~lP~~~~~e~~lvl~d~~~~~~----g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P-----~~~v~~-~~~RlR 294 (551)
.+|.. ++|++++++||....+ |...+.. ....+..++.++|||+.++ .+++++ ++||||
T Consensus 284 -~~P~~-d~~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlr 352 (447)
T 2dv6_A 284 -GLPQV-DREFYVMQGEIYTVKSFGTSGEQEMDY---------EKLINEKPEYFLFNGSVGSLTRSHPLYASVGETVRIF 352 (447)
T ss_dssp -CSCCC-SEEEEEEEEEECBSSCTTCCEECCBBH---------HHHHTTCCSEEEETTSTTCCCCCCCEEECTTCEEEEE
T ss_pred -CCCCC-CeeEEEEecccccCCcccccccccCCh---------HHhhccCCCEEEECCcccCCCCCcceEECCCCEEEEE
Confidence 24553 7888899999864322 1110000 0001224679999999986 578888 899999
Q ss_pred EEecCCCceEEEEEcCCceEEEEEcCCCCCCCce-EecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCC
Q 008840 295 IINASNARFFRFFFTNGLRFIHVGSDSAYLGKPV-VTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVND 373 (551)
Q Consensus 295 llNas~~~~~~l~l~~g~~~~via~DG~~l~~P~-~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~ 373 (551)
|+|++..+.+.||| +||.|+||+.||++++.|. .+|++.|+||||+||+|+++++ | .|.|+.......
T Consensus 353 liN~~~~~~h~~hl-hGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~p-G-~~~~hch~~~h~-------- 421 (447)
T 2dv6_A 353 FGVGGPNFTSSFHV-IGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDRA-G-RYILVDHALSRL-------- 421 (447)
T ss_dssp EEEEESSCCEEEEE-ETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECCSC-E-EEEEEESSGGGG--------
T ss_pred EEeCCCCceEeEEE-cCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECCCC-E-EEEEEecCcCcc--------
Confidence 99999888899999 6999999999999997777 6899999999999999999974 4 899887643211
Q ss_pred CCCceEEEEEccCC
Q 008840 374 ANGKVMKFIILKNR 387 (551)
Q Consensus 374 ~~~~vm~f~v~~~~ 387 (551)
..+.++.|+|.+..
T Consensus 422 ~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 422 EHGLVGFLNVDGPK 435 (447)
T ss_dssp GGTCCEEEEECSCS
T ss_pred ccCCEEEEEEeCCC
Confidence 12346778886543
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.1e-34 Score=328.18 Aligned_cols=257 Identities=17% Similarity=0.173 Sum_probs=189.6
Q ss_pred eeEEEEEEEEEEeecCCCC-----------------CccEEEeecCCC-----------CCCCCCcEEEEECCCEEEEEE
Q 008840 64 KKLEIGMFEKKWKFHRDLP-----------------PTPVFAFGTSSL-----------TASVPGPTIEALHGIDTYVTW 115 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~-----------------~~~~~~y~~~~~-----------ng~~PGPti~v~~Gd~v~v~l 115 (551)
.+|.|.+.+..|.+.++.. ..-.+.|..... +.++|||+|||++||+|+|+|
T Consensus 134 r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v~v~~ 213 (770)
T 2r7e_B 134 RHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNIMVTF 213 (770)
T ss_dssp EEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCEEEEE
T ss_pred EEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEEEEEE
Confidence 4788889999998877652 112345653322 237999999999999999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCC-CCCCcceeccccCCCCCcceeeEEEEcCc-------
Q 008840 116 QNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESD-GYAKSWFTAGFEEKGPTWTNETYHYHNMQ------- 187 (551)
Q Consensus 116 ~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~D-G~p~~~~t~~~i~pG~~~~~~~y~f~~~~------- 187 (551)
+|.|+. +++|||||++++..+| |+|. ++|+|.||++| +|+|.+.+
T Consensus 214 ~N~l~~---------------------~~siH~HG~~~~~~~~dG~~~---~~~~I~PG~~~---tY~f~~~~~~gp~~~ 266 (770)
T 2r7e_B 214 RNQASR---------------------PYSFYSSLISYEEDQRQGAEP---RKNFVKPNETK---TYFWKVQHHMAPTKD 266 (770)
T ss_dssp ECCSSS---------------------CCCCCBTTCCCCCCSSSCTTT---TSSCCCSSCEE---EEECCCCSSSSCCSS
T ss_pred EECCCC---------------------CcceeecccccccccCCCCcC---ccCccCCCCeE---EEEEEecCccCCccC
Confidence 999987 8999999999998876 9875 67899999999 99999975
Q ss_pred --cCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCC----CCCCCC
Q 008840 188 --QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNST----GNNPSI 261 (551)
Q Consensus 188 --~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~----g~~~~~ 261 (551)
++||||||||.+. ..|+++||+|+|||+++....+...+...++|++|+++++ +++++.+.... -..+..
T Consensus 267 d~~~Gt~wYHsh~~~--~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~--de~~swy~~~~~~~~~~~p~~ 342 (770)
T 2r7e_B 267 EFDCKAWAYSSDVDL--EKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIF--DETKSWYFTENMERNCRAPCN 342 (770)
T ss_dssp CCSEEEEEECCCSSS--SHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEE--CCSSSSCTTGGGSSCSCCSSC
T ss_pred CCCCeeEEeeccCCc--HHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeec--CccccchhccchhhcccCccc
Confidence 8999999999975 3489999999999997652211111222378999888764 33333221100 000100
Q ss_pred CCCCCCc--cCCceEEECCccc---CceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEE
Q 008840 262 HPQWQPE--YFGDVIVVNGKAW---PRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTV 334 (551)
Q Consensus 262 ~~~~~~~--~~gd~~lVNG~~~---P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~ 334 (551)
.....+. ..++.++|||+.+ |.+.++. ++|||||+|++.. ..+.||| |||.|+|++.||. .+|++.
T Consensus 343 ~~~~d~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHl-hGh~f~Vv~~dg~------~~Dtv~ 415 (770)
T 2r7e_B 343 IQMEDPTFKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHF-SGHVFTVRKKEEY------KMALYN 415 (770)
T ss_dssp CCSSSSSSTTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEB-SSCCEECCSSSCC------EESEEE
T ss_pred cccCCccccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEE-cCCEEEEEecCCc------eeeEEE
Confidence 0000011 1246789999986 5678887 8999999999864 3678888 7999999999973 789999
Q ss_pred EccCceEEEEEEcCCCCCceEEEecC
Q 008840 335 LAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 335 l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|.||||++|+|+++++ | .|.|...
T Consensus 416 l~Pg~~~~v~~~ad~p-G-~w~~hcH 439 (770)
T 2r7e_B 416 LYPGVFETVEMLPSKA-G-IWRVECL 439 (770)
T ss_dssp CCTTCCCEEEECCSSC-B-CCCBCCC
T ss_pred ECCCeEEEEEEEeCCC-C-ceEEEec
Confidence 9999999999999875 4 5655543
No 37
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=9.2e-33 Score=323.83 Aligned_cols=357 Identities=14% Similarity=0.108 Sum_probs=224.7
Q ss_pred CCCCCCC--cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC---CCCCCCCcceecc
Q 008840 94 LTASVPG--PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP---ESDGYAKSWFTAG 168 (551)
Q Consensus 94 ~ng~~PG--Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~---~~DG~p~~~~t~~ 168 (551)
+||++|| |+|++.+||+|.+++.|. .+.+||||+++.. .+||.+. .| |
T Consensus 623 iNG~~~g~~P~l~~~~gd~v~~~v~~~------------------------g~~~~~Hgl~~~g~t~~~dG~~~--~t-~ 675 (1065)
T 2j5w_A 623 MNGFMYGNQPGLTMCKGDSVVWYLFSA------------------------GNEADVHGIYFSGNTYLWRGERR--DT-A 675 (1065)
T ss_dssp ETTBCTTCCCCCEEETTCCEEEEEECC------------------------CSTTCCEEEEETTCCEEETTEEE--SE-E
T ss_pred EeeEecCCCCceEEeCCCEEEEEEEcC------------------------CCcceEEeeEEeCCceeecCeec--ce-E
Confidence 4799999 889999999999999974 3558999998776 3899986 45 8
Q ss_pred ccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEE----EEeee
Q 008840 169 FEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFV----FDRNF 244 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl----~d~~~ 244 (551)
+|.||.++ +|+|.++ ++||||||||.. .|..+||.|.|+|+++. .....+. .++.|.+++| +||..
T Consensus 676 ~i~pg~~~---t~~~~~~-~~Gt~~~h~h~~----~~~~~Gm~g~~~V~~~~-~~~~~~~-~yd~e~~~~iaa~~~dW~~ 745 (1065)
T 2j5w_A 676 NLFPQTSL---TLHMWPD-TEGTFNVECLTT----DHYTGGMKQKYTVNQCR-RQSEDST-FYLGERTYYIAAVEVEWDY 745 (1065)
T ss_dssp EECTTCEE---EEEECCC-SCEEEEEEECSH----HHHHTTCEEEEEEECCS-CCCSCCC-CCSEEEEEEEEEEEEEEES
T ss_pred eecCCceE---EEEEecC-CCeEEEEecCCC----cccCCCcEEEEEEcCCc-cccCCcc-CCCcceEEEEeeeeccccC
Confidence 99999999 9999997 999999999984 37789999999999764 2122222 2366888999 89976
Q ss_pred cCCCceEe---cCCCCCCCC-----CC-CCCC--------ccCCceEEE----------CCcccCceeecC-eEEEEEEE
Q 008840 245 LTNGSIYM---NSTGNNPSI-----HP-QWQP--------EYFGDVIVV----------NGKAWPRMTVRR-RKYRFRII 296 (551)
Q Consensus 245 ~~~g~~~~---~~~g~~~~~-----~~-~~~~--------~~~gd~~lV----------NG~~~P~~~v~~-~~~RlRll 296 (551)
.....+.. +..+..+.. .. .+.. ++.+..+++ -+..-|.|.++. +++|+|+.
T Consensus 746 ~~~~~~~~~~~~~~~~~p~~~~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~ 825 (1065)
T 2j5w_A 746 SPQREWEKELHHLQEQNVSNAFLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFK 825 (1065)
T ss_dssp CSCCHHHHHHHHHHTCCCCCTTTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEE
T ss_pred CcchhhhhhccCCCccCccceeecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEE
Confidence 54442110 000110100 00 0000 001112223 122347899987 89999999
Q ss_pred ecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCC--------ceEEEecCCCC--CCC
Q 008840 297 NASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTS--------DVAILANDAPY--PYP 366 (551)
Q Consensus 297 Nas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g--------~~~~L~~~~~~--~~~ 366 (551)
|.. .+.+.++. ||. .+... |. ..+.||+++...+...+..| ++|+....... ...
T Consensus 826 N~~-~~~~sih~-HGl--~~~~~-~~----------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~ 890 (1065)
T 2j5w_A 826 NMA-TRPYSIHA-HGV--QTESS-TV----------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLY 890 (1065)
T ss_dssp ECS-SSCBCCEE-SSC--BCSCS-CC----------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHH
T ss_pred eCC-CCCceEee-ccc--cccCC-CC----------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhh
Confidence 996 45677877 673 33322 21 24679999777777654322 26666654321 000
Q ss_pred CCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc---------------------cCC-
Q 008840 367 AGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT---------------------SNT- 424 (551)
Q Consensus 367 ~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~---------------------~~~- 424 (551)
.| -.-.+.|..... +. ... ........+.+..+. ...
T Consensus 891 ~G--------L~G~liV~~~~~-----l~--~~~------~~~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~ 949 (1065)
T 2j5w_A 891 SG--------LIGPLIVCRRPY-----LK--VFN------PRRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDD 949 (1065)
T ss_dssp TT--------CEEEEEEECCC------------C------CCCEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTC
T ss_pred cc--------ccceeEecCccc-----cc--ccC------CCcceEEEEEEEeecCCcceeeccCcccccCCccccCcch
Confidence 11 111133322110 00 000 000000101010000 000
Q ss_pred ----CCcceEEEcccccCCCCCCCcc--eeeeEEEEeee--eeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccE
Q 008840 425 ----GKPTHLLINAKTLEDPVTETPK--TLDQTELVNLE--EFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVY 496 (551)
Q Consensus 425 ----g~~~~~~INg~~f~~~~~~~~~--~~~~~~l~n~~--~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV 496 (551)
.....|+|||+.|+.......+ .+++|.+.|.. ...|++|.|+|.| .+.. .| +.|||||
T Consensus 950 ~~~~~~~~~~~iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F--~vv~--~~---------p~~~DTv 1016 (1065)
T 2j5w_A 950 EEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSF--QYKH--RG---------VYSSDVF 1016 (1065)
T ss_dssp HHHHHHTEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCE--EETT--TT---------CEEESEE
T ss_pred hhhhccCceEEECCccCCCCccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEE--EEEe--cC---------CceeeEE
Confidence 0112489999999753221121 28899999973 5789999999855 3422 11 4799999
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.|+||++++|+|+|+ +|| ||||||+++|+|.|||+.|+|.
T Consensus 1017 ~v~pg~~~~v~~~ad--------------~pG~w~~HCH~~~H~~~GM~~~~~V~ 1057 (1065)
T 2j5w_A 1017 DIFPGTYQTLEMFPR--------------TPGIWLLHCHVTDHIHAGMETTYTVL 1057 (1065)
T ss_dssp EECTTCEEEEEECCC--------------SCEEEEEEECCHHHHHTTCEEEEEEE
T ss_pred EECCCCeEEEEEECC--------------CCeeEEEEeCCHHHHhcCCcEEEEEe
Confidence 999999999999887 788 9999999999999999999986
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.97 E-value=4.6e-32 Score=306.28 Aligned_cols=224 Identities=18% Similarity=0.215 Sum_probs=164.3
Q ss_pred CCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCC-----CCCcceeccc
Q 008840 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDG-----YAKSWFTAGF 169 (551)
Q Consensus 96 g~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG-----~p~~~~t~~~ 169 (551)
..+|||+||+++||+|+|+++|+|+. +++|||||+++... +|| ++. +++|+
T Consensus 447 ~g~pGP~Ir~~~GD~v~v~~~N~l~~---------------------~~siHwHGl~~~~~~~DG~~~~G~~~--~~~~~ 503 (742)
T 2r7e_A 447 SGILGPLLYGEVGDTLLIIFKNQASR---------------------PYNIYPHGITDVRPLYSRRLPKGVKH--LKDFP 503 (742)
T ss_dssp SCSCCCCCCCBTTCEEECCEECCSSS---------------------CBCCEETTCSEECCTTCSCCSSSCSS--TTTSC
T ss_pred cCCCCCeEEEECCCEEEEEEEeCCCC---------------------CcCEEecccccCCcccccccCCCCcc--ccccc
Confidence 46899999999999999999999997 89999999997554 565 444 67899
Q ss_pred cCCCCCcceeeEEEEcCccCc---------eeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEE
Q 008840 170 EEKGPTWTNETYHYHNMQQPG---------NTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~G---------t~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~ 240 (551)
|.||++| +|+|++.+++| |||||||.+. ..|+++||+|+|||+++....+.+.|...++|++|+++
T Consensus 504 I~PG~t~---tY~f~~~~~agPg~~d~~~gT~wYHsH~~~--~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~ 578 (742)
T 2r7e_A 504 ILPGEIF---KYKWTVTVEDGPTKSDPRCLTRYYSSFVNM--ERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFS 578 (742)
T ss_dssp CBSSCEE---CCEEECCSTTSCCSSSCSCCCCEEECCSSS--SSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEEC
T ss_pred CCCCCeE---EEEEEeccccCCcccCCCceEEEEecCcch--hhhhhccceeeEEEcCccccccccCcCCCCceEEEEee
Confidence 9999999 99999976655 9999999975 35899999999999965422233334444889999998
Q ss_pred EeeecCCCceEecC----CCCCCCCCCCCCCcc--CCceEEECCcccCc--eeecC-eEEEEEEEecCC-CceEEEEEcC
Q 008840 241 DRNFLTNGSIYMNS----TGNNPSIHPQWQPEY--FGDVIVVNGKAWPR--MTVRR-RKYRFRIINASN-ARFFRFFFTN 310 (551)
Q Consensus 241 d~~~~~~g~~~~~~----~g~~~~~~~~~~~~~--~gd~~lVNG~~~P~--~~v~~-~~~RlRllNas~-~~~~~l~l~~ 310 (551)
++ +++.+.+... ....+.....-.+.+ ....++|||+.+.. +.++. ++|||||+|++. ...+.||| +
T Consensus 579 ~f--de~~~wy~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~Hl-h 655 (742)
T 2r7e_A 579 VF--DENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFF-S 655 (742)
T ss_dssp BC--CGGGSSCSHHHHHHHSSSSSCSCCCCHHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEE-S
T ss_pred cc--ccccccccccchhhcccCchhcccccccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEE-c
Confidence 74 3333322100 000000000000001 12357899997532 77877 899999999775 44577888 7
Q ss_pred CceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 311 GLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 311 g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
||.|+++ +..+|++.|.||||++|+|.++++ | .|.+....
T Consensus 656 Gh~f~v~---------~~~~Dtv~l~Pg~~~~v~~~ad~p-G-~w~~hcH~ 695 (742)
T 2r7e_A 656 GYTFKHK---------MVYEDTLTLFPFSGETVFMSMENP-G-LWILGCHN 695 (742)
T ss_dssp SSCCCCB---------SSSBCSSCCCCCSSEECCEECCCC-C-CSCCEECC
T ss_pred CcEEEEe---------ccceeEEEECCCcEEEEEEEcCCC-e-EEEEEeCC
Confidence 9999987 456899999999999999999875 4 67776653
No 39
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.84 E-value=9e-21 Score=196.22 Aligned_cols=219 Identities=12% Similarity=0.137 Sum_probs=143.7
Q ss_pred ECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC---
Q 008840 276 VNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES--- 350 (551)
Q Consensus 276 VNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~--- 350 (551)
+||+. -|.|+++. +++|+||.|..... +.||. ||..+. .+.||.++. ...|.|||+++..+++.++
T Consensus 70 ~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~-~sih~-HG~~~~-~~~DG~~~t------~~~I~PG~~~~y~f~~~~pg~~ 140 (343)
T 3cg8_A 70 GKASVPGPLIEVNEGDTLHIEFTNTMDVR-ASLHV-HGLDYE-ISSDGTAMN------KSDVEPGGTRTYTWRTHKPGRR 140 (343)
T ss_dssp TCCBSSCCCEEEETTCEEEEEEEECSSSC-BCCEE-SSSBCC-GGGSCCTTT------TCSBCTTCEEEEEEECCCCEEC
T ss_pred CCCCccCCEEEEECCCEEEEEEEECCCCC-eeEEe-cCcccC-CcCCCcccc------cccccCCCEEEEEEEeCCCCcc
Confidence 47775 49999988 89999999999654 45888 798776 689999852 4568999999999988754
Q ss_pred --------CCceEEEecCCCCCCCCCCCCCCCCCceEE-EEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc
Q 008840 351 --------TSDVAILANDAPYPYPAGNPVNDANGKVMK-FIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT 421 (551)
Q Consensus 351 --------~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~-f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~ 421 (551)
..++|+-.+..... ..+ .......+.. +.|.... + .. ++ +++.+.-.
T Consensus 141 ~~g~~~~~~~Gt~~YH~h~~~~-~~~--~~~~~~Gl~G~~iV~~~~--~--~~--------------pd--~e~~l~~~- 196 (343)
T 3cg8_A 141 DDGTWRPGSAGYWHYHDHVVGT-EHG--TGGIRNGLYGPVIVRRKG--D--VL--------------PD--ATHTIVFN- 196 (343)
T ss_dssp TTSCEECCSCEEEEEECSSSSS-TTC--HHHHHHTCEEEEEEECTT--C--CC--------------CS--EEEEEEEE-
T ss_pred cccccCCCCceEEEEecCcccc-ccc--hhhhhcCCeEEEEEecCC--C--CC--------------CC--ceEEEEcc-
Confidence 11345444432100 000 0000011222 3333221 1 00 11 33333211
Q ss_pred cCCCCcceEEEcccccCCCCCCC--cceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeC
Q 008840 422 SNTGKPTHLLINAKTLEDPVTET--PKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKIT 499 (551)
Q Consensus 422 ~~~g~~~~~~INg~~f~~~~~~~--~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~ 499 (551)
.|+|||+.|....... ....++|.++|.....|++|.|+|.| .+. .+|.... +..+..|||||.|.
T Consensus 197 -------d~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f--~v~--~~G~~~~-p~~~~~~~Dtv~v~ 264 (343)
T 3cg8_A 197 -------DMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRW--ADN--RTGILTG-PDDPSRVIDNKITG 264 (343)
T ss_dssp -------TTEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCE--ESS--SSSSCCS-TTCCCCEESEEEEC
T ss_pred -------cceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEE--EEe--ccCcccC-CCCcccceeeEEeC
Confidence 2799999875421111 11278899999998899999999955 342 2342111 23456899999999
Q ss_pred CCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 500 PGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 500 pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
||++++|+++|+. .++|| ||||||+++|++.|||+.|+|.
T Consensus 265 PG~~~~v~~~~~~-----------~~~pG~w~~HCHi~~H~~~GM~g~~~V~ 305 (343)
T 3cg8_A 265 PADSFGFQIIAGE-----------GVGAGAWMYHCHVQSHSDMGMVGLFLVK 305 (343)
T ss_dssp TTCEEEEEEETTT-----------TTCSEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEEECC-----------CCCCeeEEEeCCCHHHHhccCcEEEEEe
Confidence 9999999998852 12788 9999999999999999999985
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.79 E-value=6.4e-19 Score=182.27 Aligned_cols=226 Identities=12% Similarity=0.159 Sum_probs=150.5
Q ss_pred CceEEECCc-ccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEc---CCCCCCCceEecEEEEccCceEEEEE
Q 008840 271 GDVIVVNGK-AWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGS---DSAYLGKPVVTNDTVLAPAEIADVVI 345 (551)
Q Consensus 271 gd~~lVNG~-~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~---DG~~l~~P~~~~~l~l~pgeR~dVlv 345 (551)
.+.+++||+ ..|.|.++. +++|+||+|.+.. ...||. || +.+.+. ||.+. +....|+||||+++.+
T Consensus 23 ~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~-~~siH~-HG--~~~~~~~~~DGvp~-----vtq~~I~PG~~~~y~f 93 (339)
T 2zwn_A 23 YKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSL-PHTIHW-HG--VHQKGTWRSDGVPG-----VTQQPIEAGDSYTYKF 93 (339)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEEESSS-CBCCEE-ET--CCCTTCGGGSCCBT-----TTBCCBCTTCEEEEEE
T ss_pred EEEEEECCccCCCeEEEECCCEEEEEEEECCCC-CccEEe-CC--CCcCCCcccCCCCc-----cccCccCCCCeEEEEE
Confidence 468999999 589999988 8999999999964 356766 45 556664 99863 3456799999999999
Q ss_pred EcCCCCCceEEEecCCCC--CCC-CCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeeccc
Q 008840 346 DFSESTSDVAILANDAPY--PYP-AGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTS 422 (551)
Q Consensus 346 ~~~~~~g~~~~L~~~~~~--~~~-~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~ 422 (551)
++++ + ++|+..+.... +.. .| -.-.+.|.... ...++ ....++..+.|.++..
T Consensus 94 ~~~~-~-Gt~wyH~H~~~~~q~~~~G--------l~G~liV~p~~---~~~~~-----------~~~d~e~~l~l~d~~~ 149 (339)
T 2zwn_A 94 KADR-I-GTLWYHCHVNVNEHVGVRG--------MWGPLIVDPKQ---PLPIE-----------KRVTKDVIMMMSTWES 149 (339)
T ss_dssp ECCS-C-EEEEEECCSSHHHHTTTSC--------CEEEEEEECSS---CCTTG-----------GGCSEEEEEEEEEECG
T ss_pred ECCC-C-EEEEEEecCCchhhhhcCC--------ceEeEEecCCC---ccccc-----------ccCCceEEEEeeheec
Confidence 9874 3 48998875421 111 11 11123343221 11111 1112222333332210
Q ss_pred ----C---CC----CcceEEEcccccCCCC--CCCcceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcC
Q 008840 423 ----N---TG----KPTHLLINAKTLEDPV--TETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHE 489 (551)
Q Consensus 423 ----~---~g----~~~~~~INg~~f~~~~--~~~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e 489 (551)
. .+ .+..|+|||+.|.... .-.+...+.|.++|.....|++|.|+|.| .+.. .+|... ..
T Consensus 150 ~~~~~~~~~g~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f--~vi~-~DG~~~----~~ 222 (339)
T 2zwn_A 150 AVADKYGEGGTPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDM--LVTH-KDGLPL----DS 222 (339)
T ss_dssp GGTTCTTCCCSTTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSSCEEEEETTCCE--EEEE-ETTEEE----EE
T ss_pred ccccccCCCCCCccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCceEEEEECCcEE--EEEE-eCCeec----CC
Confidence 0 01 2346899999986431 11122378899999988889999999865 4433 356322 12
Q ss_pred CCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccc------cccCcccceEEc
Q 008840 490 QGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDH------EDNIMMRPLKLI 550 (551)
Q Consensus 490 ~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~H------ED~GMM~~~~V~ 550 (551)
+.|+|||.|.||+++.|+++|+ +|| |++|||+++| ++.|||..|+|.
T Consensus 223 p~~~dtv~l~pg~r~~v~~~~~--------------~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~ 276 (339)
T 2zwn_A 223 PYYADTVLVSPGERYDVIIEAD--------------NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYD 276 (339)
T ss_dssp EEEESEEEECTTCEEEEEEECC--------------SCSEEEEEECCGGGSCBTTBSSCSSEEEEEET
T ss_pred CcEEEEEEECCCCEEEEEEEeC--------------CCeeEEEEEechhhcccccccCCCcEEEEEEC
Confidence 4689999999999999999987 667 9999999999 899999998874
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.79 E-value=6.8e-19 Score=180.35 Aligned_cols=229 Identities=13% Similarity=0.177 Sum_probs=149.8
Q ss_pred ceEEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEE-EEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFI-HVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~-via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..+++||+. -|.|.++. +++++|+.|... ....+|+ ||.... ....||.+- +....|+|||+++..++++
T Consensus 23 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~-HG~~~~~~~~~DG~p~-----~t~~~i~PG~~~~y~f~~~ 95 (318)
T 3g5w_A 23 HTFAFNGQVPAPLIHVMEGDDVTVNVTNMTT-LPHTIHW-HGMLQRGTWQSDGVPH-----ATQHAIEPGDTFTYKFKAE 95 (318)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCCEE-ETCCCTTCGGGSCCBT-----TTBCCBCTTCEEEEEEECC
T ss_pred EEEEECCccCCceEEEeCCCEEEEEEEeCCC-CceeEEe-cCcCCCCCcccCCCcc-----cccccCCCCCEEEEEEEcC
Confidence 589999985 68999988 899999999874 4567888 686543 236799764 2346789999999999987
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeeccc----C-
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTS----N- 423 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~----~- 423 (551)
+. ++|+-.+......... ..+-.-.|.|.... ...++ ....+...+.+.++.. .
T Consensus 96 ~~--Gt~wYH~H~~~~~~~~-----~~Gl~G~lIV~~~~---~~~~~-----------~~~d~e~~l~l~dw~~~~~~~~ 154 (318)
T 3g5w_A 96 PA--GTMWYHCHVNVNEHVT-----MRGMWGPLIVEPKN---PLPIE-----------KTVTKDYILMLSDWVSSWANKP 154 (318)
T ss_dssp SC--EEEEEECCSSHHHHHH-----HSCCEEEEEEECSS---CCHHH-----------HTCCEEEEEEEEEECGGGTTCT
T ss_pred CC--EEEEEEccCChhhhhc-----cCCCEEEEEEcCCC---ccccc-----------ccccceeEEEEEeecccccccc
Confidence 53 4888776542110000 01112234443321 00000 0112222333333211 0
Q ss_pred --CC----CcceEEEcccccCCCCC--CCcceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCcc
Q 008840 424 --TG----KPTHLLINAKTLEDPVT--ETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNV 495 (551)
Q Consensus 424 --~g----~~~~~~INg~~f~~~~~--~~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDT 495 (551)
.+ .+..|+|||+.|..... -.+...++|+++|.....|++|.|+|.| .+.. .+|... .++.||||
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f--~vi~-~dG~~~----~~p~~~dt 227 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHIS--QIAF-KDGFPL----DKPIKGDT 227 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSSCEEEEETTSCE--EEEE-ETTEEE----EEEEEESE
T ss_pred ccCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCceEEEEECCcEE--EEEe-cCCccc----CCCccccE
Confidence 11 23469999999875321 1122378899999988789999999965 4433 355321 13458999
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccccc------CcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDN------IMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~------GMM~~~~V 549 (551)
|.|.||++++|+++++ +|| |+||||+++|+++ |||..|+|
T Consensus 228 v~l~pger~~v~~~a~--------------~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~ 274 (318)
T 3g5w_A 228 VLIGPGERYDVILNMD--------------NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEY 274 (318)
T ss_dssp EEECTTCEEEEEEECC--------------SCSEEEEEESSGGGSCBTTBSSCBSEEEEEE
T ss_pred EEECCCCEEEEEEECC--------------CCeeEEEEeccHHHhhccCcCCCCCEEEEEE
Confidence 9999999999999987 678 9999999999994 78888876
No 42
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.78 E-value=9e-19 Score=175.99 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=145.1
Q ss_pred EEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC-
Q 008840 274 IVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES- 350 (551)
Q Consensus 274 ~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~- 350 (551)
...||+. -|.|.++. +++++++.|.. .....+|. ||..+.- ..||..+ ..-.|.||+++...+++.+.
T Consensus 27 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~-HG~~~~~-~~DG~~~------t~~~i~pG~~~~Y~f~~~~~~ 97 (276)
T 3kw8_A 27 EKGKASVPGPLIEVNEGDTLHIEFTNTM-DVRASLHV-HGLDYEI-SSDGTAM------NKSDVEPGGTRTYTWRTHKPG 97 (276)
T ss_dssp STTCCBSSCCCEEEETTCEEEEEEEECS-SSCBCCEE-SSSBCCG-GGSCCTT------TTCSBCTTCEEEEEEECCCCE
T ss_pred eccCCcccCCeEEEECCCEEEEEEEECC-CCCccEee-cCcccCC-ccCCCcC------CcCCCCCCCEEEEEEEcCCcc
Confidence 3468874 69999987 89999999997 45567888 7866543 5899863 34568999999999988752
Q ss_pred ----------CCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeec
Q 008840 351 ----------TSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY 420 (551)
Q Consensus 351 ----------~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~ 420 (551)
..++|+-.+..... ..+ ......+-.-.|.|..+.. + . .+ |++.+.-
T Consensus 98 ~~~~g~~~~~~~gt~~YH~h~~~~-~~~-~~~~~~Gl~G~liV~~~~~-----~----~---------~d--rE~~l~l- 154 (276)
T 3kw8_A 98 RRDDGTWRPGSAGYWHYHDHVVGT-EHG-TGGIRNGLYGPVIVRRKGD-----V----L---------PD--ATHTIVF- 154 (276)
T ss_dssp ECTTSCEECCSCEEEEEECSSSSS-TTC-HHHHHHTCEEEEEEECTTC-----C----C---------CS--EEEEEEE-
T ss_pred ccccCccCCCCCEEEEEecCcccc-ccc-hhhhhCccEEEEEEecCCC-----c----c---------cc--cceEEEe-
Confidence 12366666543110 000 0000111222344443211 0 0 02 3343321
Q ss_pred ccCCCCcceEEEcccccCCCCCCCc--ceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEe
Q 008840 421 TSNTGKPTHLLINAKTLEDPVTETP--KTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKI 498 (551)
Q Consensus 421 ~~~~g~~~~~~INg~~f~~~~~~~~--~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v 498 (551)
..|+|||+.|+....... ...++|.+.|.....|++|.|+|.| .+. .+|... .+.....|||||.|
T Consensus 155 -------~~~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f--~v~--~~G~~~-~p~~~~~~~Dtv~v 222 (276)
T 3kw8_A 155 -------NDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRW--ADN--RTGILT-GPDDPSRVIDNKIT 222 (276)
T ss_dssp -------ETTEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCE--ESS--SSSSCC-STTCCCCEESEEEE
T ss_pred -------cccccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEcccee--EEe--ccCccC-CCcccccCCccEEe
Confidence 127999999874211111 1267899999988899999999855 332 244211 12234579999999
Q ss_pred CCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 499 TPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 499 ~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
.||++++++++++.. ++|| |+||||+++|++.|||+.|+|.+
T Consensus 223 ~pg~~~~~~~~~~~~-----------~npG~w~~HCH~~~H~~~GM~g~~~V~~ 265 (276)
T 3kw8_A 223 GPADSFGFQIIAGEG-----------VGAGAWMYHCHVQSHSDMGMVGLFLVKK 265 (276)
T ss_dssp CTTCEEEEEEETTTT-----------TCSEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred CCCceEEEEEEeccC-----------CCCCeEEEECCCchHhhCCCeEEEEEeC
Confidence 999999998888621 2688 99999999999999999999863
No 43
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.75 E-value=2.3e-19 Score=182.93 Aligned_cols=226 Identities=11% Similarity=0.064 Sum_probs=133.2
Q ss_pred eEEECCcccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCC---ceEecEEEEccCceEEEEEEcC
Q 008840 273 VIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGK---PVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 273 ~~lVNG~~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~---P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..++||...|.|.++. +++|+||.|.. .+.+.||. ||..+ ..+.||.+... ++......|+||||++..++++
T Consensus 51 ~~~~n~~pGP~I~v~~Gd~v~v~~~N~l-~~~~siH~-HGl~~-~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 51 QSRTSGLLGPTLYAEVGDIMKVHFKNKA-HKPLSIHA-QGIKY-SKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCSSCCSCCCCEEEETTCEEEEEEEECS-SSCBCCEE-ESSCC-CTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccCCccCCEEEEeCCCEEEEEEEECC-CCcccEee-cceec-ccccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 4568999999999988 89999999976 46678888 68664 23589987632 2333457899999999999998
Q ss_pred CCCC--------ceEEEecCCCC--CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeee
Q 008840 349 ESTS--------DVAILANDAPY--PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMY 418 (551)
Q Consensus 349 ~~~g--------~~~~L~~~~~~--~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~ 418 (551)
+.+| ++|+..+.... +...| -.-.+.|......+....|. . ..++..+.+.
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~G--------L~G~liV~~~~~~~~~~~~~---~--------~d~e~~l~~~ 188 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSG--------LIGPLLICKKGTLTEDGTQK---M--------FEKQHVLMFA 188 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTT--------CCEEEEEECTTCBCTTSSBS---S--------SCCCCCCBCC
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccC--------ceEEEEEccCCCCCccCCcC---c--------ccceEEEEEE
Confidence 7644 58998876422 11112 11124443322111001110 0 0111111111
Q ss_pred eccc---CC-CCcceEEEcccccCC-CCCC-CcceeeeEEEEeeeee--eeeeccccCceeeeeeeeccCCccCCCCcCC
Q 008840 419 EYTS---NT-GKPTHLLINAKTLED-PVTE-TPKTLDQTELVNLEEF--KACMNKINDAIKCNLSKHACGKKQAVPVHEQ 490 (551)
Q Consensus 419 ~~~~---~~-g~~~~~~INg~~f~~-~~~~-~~~~~~~~~l~n~~~~--~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~ 490 (551)
++.. .. .....++|||+.|.. +... .+...+.|.|+|.... .|.+|.|+|.|. + +|
T Consensus 189 d~d~~~~~~~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~--~----dG---------- 252 (306)
T 1sdd_A 189 VFDESKSWNQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE--Q----NH---------- 252 (306)
T ss_dssp EEETTSSSSCCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE--E----TT----------
T ss_pred ecccccccccCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee--e----CC----------
Confidence 1111 01 113458999999853 2111 1223678999998753 566777777542 1 33
Q ss_pred CcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 491 GWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.++||+.|.||++++|+|+|+ +|| |+||||+++|++.|||+.|+|.
T Consensus 253 ~~~dtv~l~pger~~v~~~~~--------------~pG~~~~hch~~~H~~~GM~~~~~V~ 299 (306)
T 1sdd_A 253 HKISAITLVSATSTTANMTVS--------------PEGRWTIASLIPRHFQAGMQAYIDIK 299 (306)
T ss_dssp EECSCCCEETTCCBC----------------------CCCCCBCCSTTTGGGTCBCCC---
T ss_pred EEcceEEECCCcEEEEEEEcC--------------CCeEEEEEeCChHHHhcCCeEEEEEe
Confidence 259999999999999999997 567 9999999999999999999985
No 44
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.75 E-value=8.6e-18 Score=171.84 Aligned_cols=217 Identities=13% Similarity=0.111 Sum_probs=138.5
Q ss_pred ccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC--------
Q 008840 280 AWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES-------- 350 (551)
Q Consensus 280 ~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~-------- 350 (551)
+-|.|.++. ++++++|.|... +..+||. ||..+. -..||..... -.|.||+.+...+++..+
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~-HG~~~~-~~~dG~~~~~------~~i~PG~~~~Y~~~~~~P~~~~~~~~ 110 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMD-VPVSLHV-HGLDYE-ISSDGTKQSR------SDVEPGGTRTYTWRTHVPGRRADGTW 110 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEE-SSSBCC-GGGSCSTTTT------CCBCTTCEEEEEEBCCCCEECTTSCE
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEee-cCCcCC-ccCCCCcccc------CCcCCCCEEEEEEEeccCCccccccc
Confidence 468999987 899999999874 4567888 786554 3578876422 248899999887776532
Q ss_pred ---CCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCc
Q 008840 351 ---TSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKP 427 (551)
Q Consensus 351 ---~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~ 427 (551)
..++|+-.+........ ......+-.-.|.|..+. + + ..+++..+.+.
T Consensus 111 ~~~~~gt~~YH~h~~~~~~~--~~~~~~Gl~G~liV~~~~--~-------~---------~~d~e~~l~~~--------- 161 (313)
T 3tas_A 111 RAGSAGYWHYHDHVVGTEHG--TGGIRNGLYGPVIVRRKG--D-------V---------LPDRTHTIVFN--------- 161 (313)
T ss_dssp ECCSCEEEEEECSSSSSTTC--HHHHHHTCEEEEEEECTT--C-------B---------CCSEEEEEEEE---------
T ss_pred cCCCceEEEEeecCcccccc--hhhhhccccCceEeeccc--c-------c---------cccccceeecc---------
Confidence 12366655542110000 000001112234443221 0 0 11223333332
Q ss_pred ceEEEcccccCCCCCC--CcceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEE
Q 008840 428 THLLINAKTLEDPVTE--TPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTR 505 (551)
Q Consensus 428 ~~~~INg~~f~~~~~~--~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~ 505 (551)
.|+|||+.+...... .....++|.++|...+.|++|.|+|.| .+.. .++. ..+...+.|+|||.|.||++++
T Consensus 162 -d~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F--~v~~-~~~~--~~~~~~~~~~Dtv~l~Pger~~ 235 (313)
T 3tas_A 162 -DMTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRW--ADNR-TGML--TGPDDPSQVIDNKICGPADSFG 235 (313)
T ss_dssp -TTEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCE--ESST-TSSC--CSTTCCCCEESEEEECTTCEEE
T ss_pred -chhcccCCcccccccccccCCEEEEEEecccccceeeeecCCee--EEEE-ECCc--cCCCCCCeeeeEEEeCCCcceE
Confidence 389999988653211 112278899999998899999999855 3322 2332 2233456899999999999999
Q ss_pred EEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 506 ILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 506 i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
+++.+.. .+||| |||||||++|++.|||+.|+|.+
T Consensus 236 v~v~a~~-----------~~nPG~w~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 236 FQVIAGE-----------GVGAGAWMYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp EEEETTT-----------TTCSEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred EEEEecc-----------CCCCEeEEEEeCChHHHHCCCeEEEEEEC
Confidence 9887652 13889 99999999999999999999853
No 45
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.68 E-value=4.9e-16 Score=160.69 Aligned_cols=227 Identities=15% Similarity=0.119 Sum_probs=131.5
Q ss_pred CceEEECCcc-cCceeecC-eEEEEEEEecCC-CceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEc
Q 008840 271 GDVIVVNGKA-WPRMTVRR-RKYRFRIINASN-ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 271 gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~-~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
.+.+++||+. .|.|+++. +++|+|+.|... .+.+.+++ ++... +.||..+ . .|.||||+++.+++
T Consensus 59 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~-~~~~~---~~~~~~~----~----~i~PG~~~~y~~~~ 126 (340)
T 2bw4_A 59 IHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDF-HAATG---ALGGGAL----T----QVNPGEETTLRFKA 126 (340)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEE-TTSCS---GGGGGGG----C----CBCTTEEEEEEEEC
T ss_pred EEEEEECCCCCCCcEEEcCCCEEEEEEEeCCCCCccCccee-CCcCC---CCCCccc----e----EeCCCCEEEEEEEC
Confidence 4689999984 78999988 899999999984 35666777 56431 2233322 1 39999999999999
Q ss_pred CCCCCceEEEecCCCC----CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc--
Q 008840 348 SESTSDVAILANDAPY----PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT-- 421 (551)
Q Consensus 348 ~~~~g~~~~L~~~~~~----~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~-- 421 (551)
++ + ++|+..+.... ....| -.-.+.|..... ....++. +. ...+...+.+.++.
T Consensus 127 ~~-~-Gt~wyH~h~~~~~~~~~~~G--------l~G~~iV~~~~~-~~~~~~~---p~------~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 127 TK-P-GVFVYHCAPEGMVPWHVTSG--------MNGAIMVLPRDG-LKDEKGQ---PL------TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp CS-C-EEEEEECCCTTCHHHHHHTT--------CEEEEEEECTBC-EECTTSC---EE------CCSEEEEEEEEEECCC
T ss_pred CC-C-eEEEEEcCCCCchhhHHhCc--------CEEEEEEccCcC-cccccCC---Cc------CcceeEEEeeeeeeec
Confidence 86 3 48998876421 11111 112234432211 0000110 00 00011111111110
Q ss_pred -cC----------------------CCCcceEEEcccccCCC----CCCCcceeeeEEEEeeeeeeeeeccccCceeeee
Q 008840 422 -SN----------------------TGKPTHLLINAKTLEDP----VTETPKTLDQTELVNLEEFKACMNKINDAIKCNL 474 (551)
Q Consensus 422 -~~----------------------~g~~~~~~INg~~f~~~----~~~~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v 474 (551)
+. ...+..|+|||+.|... ..-.+....+|...+.+.+.+..+.++|.+ .+
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~--~V 264 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGD--YV 264 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEE--EE
T ss_pred cccCCcccccccccccccchhhHhhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcce--EE
Confidence 00 11234689999998532 110111123333334334444444555533 33
Q ss_pred eeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccc-cccccCcccceEEc
Q 008840 475 SKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHIL-DHEDNIMMRPLKLI 550 (551)
Q Consensus 475 ~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL-~HED~GMM~~~~V~ 550 (551)
. .+|....+ ...|+|||.+.|||+++|+|+|+ +|| |+||||++ +|++.|||+.|+|.
T Consensus 265 i--~dG~~~~~---p~~~~dtv~l~pGer~~v~v~~~--------------~pG~y~~~~h~~~~h~~~Gm~~~~~V~ 323 (340)
T 2bw4_A 265 W--ATGKFRNP---PDLDQETWLIPGGTAGAAFYTFR--------------QPGVYAYVNHNLIEAFELGAAGHFKVT 323 (340)
T ss_dssp E--TTCCTTSC---CEEEESCCCBCTTEEEEEEEECC--------------SCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred e--CCCcccCC---ccccceEEEeCCCceEEEEEECC--------------CCeeeEEEcCchHHHHhCCCEEEEEEC
Confidence 2 25532211 12479999999999999999998 568 99999999 69999999999985
No 46
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.60 E-value=8.7e-15 Score=150.86 Aligned_cols=227 Identities=16% Similarity=0.126 Sum_probs=127.5
Q ss_pred CceEEECCcc-cCceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEc
Q 008840 271 GDVIVVNGKA-WPRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 271 gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
...+++||+. -|.|.++. +++|+|+.|.+.+ +...+++ ++.. +.||+. +. . .|.||+++++.+++
T Consensus 52 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~-~~~~----~~~~~~---~~--~--~i~PG~~~~y~f~~ 119 (333)
T 1mzy_A 52 LQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDF-HAAT----GALGGG---GL--T--LINPGEKVVLRFKA 119 (333)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEE-TTSC----SGGGGG---GG--C--CBCTTEEEEEEEEC
T ss_pred EEEEEECCccCCCcEEecCCCEEEEEEEECCCCccccccee-cCCC----CCCCCC---ce--e--EeCCCCEEEEEEEC
Confidence 3589999996 78999988 8999999999642 3344444 3321 123321 11 1 39999999999998
Q ss_pred CCCCCceEEEecCCCC-----CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc-
Q 008840 348 SESTSDVAILANDAPY-----PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT- 421 (551)
Q Consensus 348 ~~~~g~~~~L~~~~~~-----~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~- 421 (551)
++ + ++|+..+.... ....| -.-.+.|..... ++..+. .+ ...++...+.+.++-
T Consensus 120 ~~-~-Gt~~yH~h~~~~~~~~~~~~G--------l~G~~iV~~~~~-----~~~~~~-~p----~~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 120 TR-A-GAFVYHCAPGGPMIPWHVVSG--------MAGCIMVLPRDG-----LKDHEG-KP----VRYDTVYYIGESDHYI 179 (333)
T ss_dssp CS-C-EEEEEECCCSTTHHHHHHHTT--------CEEEEEEECTTC-----CBCTTS-CB----CCCSEEEEEEEEEECC
T ss_pred CC-C-EEEEEeecCCcccchhhhhCC--------CEEEEEEccCcC-----cccccc-CC----Cccchheeeeeeeecc
Confidence 76 3 48998876421 11112 122344432211 111000 00 000111111111110
Q ss_pred ------------------------cCCCCcceEEEcccccCCCCCC--CcceeeeEEEEeeee--eeeeeccccCceeee
Q 008840 422 ------------------------SNTGKPTHLLINAKTLEDPVTE--TPKTLDQTELVNLEE--FKACMNKINDAIKCN 473 (551)
Q Consensus 422 ------------------------~~~g~~~~~~INg~~f~~~~~~--~~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~ 473 (551)
.....+..|+|||+.+...... ..+.=+.++|.|... ..+....++|.+ .
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~--~ 257 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGD--L 257 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEE--E
T ss_pred CccccccccccccccccccchhHHhhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccEEECCCCe--E
Confidence 0011234689999986432100 011113456666532 111112233422 2
Q ss_pred eeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccc-ccCcccceEEc
Q 008840 474 LSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHE-DNIMMRPLKLI 550 (551)
Q Consensus 474 v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HE-D~GMM~~~~V~ 550 (551)
+. .+|...+++ ..|+||+.|.|||+++|++.|+ +|| |+||||+++|+ |.|||+.|+|.
T Consensus 258 Vi--~dG~~~~~p---~~~~dtv~l~pGer~~v~v~a~--------------~pG~y~~~ch~~~h~~~~Gm~~~~~v~ 317 (333)
T 1mzy_A 258 VW--ETGKFHNAP---ERDLETWFIRGGTAGAALYKFL--------------QPGVYAYVNHNLIEAVHKGATAHVLVE 317 (333)
T ss_dssp EE--TTCCTTSCC---EEEESBCCBCTTEEEEEEEECC--------------SCEEEEEEESSHHHHHTTCCEEEEEEE
T ss_pred EE--eCCcccCCC---ccCcceEEECCCceEEEEEEcC--------------CCEEEEEecChhhhHhhCCCEEEEEEc
Confidence 32 256432221 2489999999999999999987 568 99999999998 99999999985
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.54 E-value=3.8e-14 Score=158.66 Aligned_cols=223 Identities=14% Similarity=0.191 Sum_probs=133.2
Q ss_pred CcccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCC--c-eEecEEEEccCceEEEEEEcCCCCC-
Q 008840 278 GKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGK--P-VVTNDTVLAPAEIADVVIDFSESTS- 352 (551)
Q Consensus 278 G~~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~--P-~~~~~l~l~pgeR~dVlv~~~~~~g- 352 (551)
+-.-|.|.++. +++++||.|... +...||. ||.... ...||.+... | ..+....|.||++++..+++++..|
T Consensus 65 ~~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~-HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp 141 (647)
T 1sdd_B 65 GILGPVIRAEVDDVIQVRFKNLAS-RPYSLHA-HGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGP 141 (647)
T ss_dssp TTSCCCEEEETTCEEEEEECCCSS-SCBCCEE-ETCC----------------------CCBCTTCCEECCEECCTTTSC
T ss_pred CCcCceEEEeCCCEEEEEEEECCC-CceEEec-CcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCC
Confidence 34678999987 899999999985 4567888 786654 5789986421 1 2234667999999999999987532
Q ss_pred ---c----eEEEecCCCC--CCCCCCCCCCCCCceEEEEEccCCCCCC-CCCCCCCCCCCCCCCccCceeeEEeeeecc-
Q 008840 353 ---D----VAILANDAPY--PYPAGNPVNDANGKVMKFIILKNRETDP-WRVPEKLIEYPSADLSAASTTRYIAMYEYT- 421 (551)
Q Consensus 353 ---~----~~~L~~~~~~--~~~~g~~~~~~~~~vm~f~v~~~~~~~~-~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~- 421 (551)
+ +|+-++.... +...| -.-.|.|........ ..+|. ..++..+.|.++.
T Consensus 142 ~~~G~~c~T~wYHsH~~~~~q~~~G--------L~G~lIV~~~~~~~~~~~~~~------------~~~e~~l~l~~~d~ 201 (647)
T 1sdd_B 142 ENPGSACRAWAYYSAVNPEKDIHSG--------LIGPLLICRKGTLDKETNMPV------------DMREFVLLFMVFDE 201 (647)
T ss_dssp CSSSCSEEEEEEECCSSHHHHHTTT--------CEEEEEEECTTSSCTTSCCCS------------SCCEEEEEEEEEEG
T ss_pred CCCCCCceEEEEccCCCCccccccc--------CccCEEEeeCCCcccccCCCC------------cceeEEEEEEeecC
Confidence 5 8888876421 11112 122344443221110 00110 0111111121000
Q ss_pred -------------------cCCCCcceEEEcccccCCCCCC-CcceeeeEEEEeeee--eeeeeccccCceeeeeeeecc
Q 008840 422 -------------------SNTGKPTHLLINAKTLEDPVTE-TPKTLDQTELVNLEE--FKACMNKINDAIKCNLSKHAC 479 (551)
Q Consensus 422 -------------------~~~g~~~~~~INg~~f~~~~~~-~~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~v~~~~~ 479 (551)
.....+..++|||+.|+.+... .+...+.|.|+|... ..|++|.|+|.| .+.
T Consensus 202 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f--~vi---- 275 (647)
T 1sdd_B 202 KKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTL--LEN---- 275 (647)
T ss_dssp GGSSCCC---------------CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCE--EEC----
T ss_pred ccccccccCcccccccCCcchhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEE--EEe----
Confidence 0001234689999998432221 122378899999874 368888888855 231
Q ss_pred CCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 480 GKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 480 G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+ . ++.++||+.|.||++++|+|+++ +|| |+||||+++|++.|||..|.|.
T Consensus 276 ~--~-----d~~~~d~v~l~pg~r~~v~~~~~--------------~pG~w~~hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 276 G--T-----QQHQLGVWPLLPGSFKTLEMKAS--------------KPGWWLLDTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp S--S-----SCEEESSEEECTTEEEEEEEECC--------------SSEEEEEECCCHHHHTTTCEEEEEEE
T ss_pred c--C-----CCcccceEEECCCeEEEEEEEec--------------cceEeecccCcccccccccccceeee
Confidence 1 0 23589999999999999999987 568 9999999999999999999984
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.52 E-value=2.7e-13 Score=139.33 Aligned_cols=218 Identities=12% Similarity=0.117 Sum_probs=141.8
Q ss_pred ceEEECCc-ccCceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGK-AWPRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~-~~P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..+++||+ ..|.|+++. +++|+|+.|.... ....+|+ ||.. +.||+.. ...|.|||++++.++++
T Consensus 59 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~-HG~~----~~dG~~~-------~~~i~PG~~~~y~f~~~ 126 (327)
T 1kbv_A 59 RYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDF-HAAT----GQGGGAA-------ATFTAPGRTSTFSFKAL 126 (327)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEE-TTCC----SGGGGTT-------TTCBCTTEEEEEEEECC
T ss_pred EEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEe-Cccc----cCCCCCc-------ceeecCCCEEEEEEECC
Confidence 57999998 578999988 8999999999853 4566777 7853 6788753 12489999999999987
Q ss_pred CCCCceEEEecCCCC---CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc----
Q 008840 349 ESTSDVAILANDAPY---PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT---- 421 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~---~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~---- 421 (551)
+. ++|+.++.... ....| -.-.+.|.... .+|. ..+...+.+.++-
T Consensus 127 ~~--Gt~wyH~h~~~~~~~~~~G--------l~G~~iV~~~~-----~~p~------------~d~e~~l~~~d~~~~~~ 179 (327)
T 1kbv_A 127 QP--GLYIYHCAVAPVGMHIANG--------MYGLILVEPKE-----GLPK------------VDKEFYIVQGDFYTKGK 179 (327)
T ss_dssp SC--EEEEEECCCSSHHHHHHTT--------CEEEEEEECTT-----CCCC------------CSEEEEEEEEEECBSSC
T ss_pred CC--eEEEEEeCCCChhhhhhcc--------eEEEEEEecCC-----CCCC------------CceEEEEEeeeeeccCc
Confidence 63 48988865310 00111 12234443321 1221 0011111111100
Q ss_pred ------------c-CCCCcceEEEcccccCCC----CCCCcceeeeEEEEeeee-eeeeeccccCceeeeeeeeccCCcc
Q 008840 422 ------------S-NTGKPTHLLINAKTLEDP----VTETPKTLDQTELVNLEE-FKACMNKINDAIKCNLSKHACGKKQ 483 (551)
Q Consensus 422 ------------~-~~g~~~~~~INg~~f~~~----~~~~~~~~~~~~l~n~~~-~~~~~~~~~~~~~~~v~~~~~G~~~ 483 (551)
. ....+..++|||+.+... ..-.+.....|+++|... ..+.+|.++|.| .+.. .+|...
T Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f--~vi~-~DG~~~ 256 (327)
T 1kbv_A 180 KGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIF--DKVY-VEGGKL 256 (327)
T ss_dssp TTCCEEECBCHHHHHHTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCB--SEEE-GGGSSC
T ss_pred cccccccccChhHhccCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEE--EEEE-cCCCcC
Confidence 0 001234689999988641 111223377899999874 456777888754 3433 356322
Q ss_pred CCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccc-ccCcccceEEc
Q 008840 484 AVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHE-DNIMMRPLKLI 550 (551)
Q Consensus 484 ~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HE-D~GMM~~~~V~ 550 (551)
+ +.++||+.|.|||+++|+++|+ +|| |++|||+++|. +.||++.++|-
T Consensus 257 ~-----p~~~d~l~l~pGer~dv~v~~~--------------~pG~y~l~~h~~~~~~~~g~~a~l~~~ 306 (327)
T 1kbv_A 257 I-----NENVQSTIVPAGGSAIVEFKVD--------------IPGNYTLVDHSIFRAFNKGALGQLKVE 306 (327)
T ss_dssp E-----ECSBSEEEECTTEEEEEEEEEC--------------SCEEEEEEESSTHHHHHSSCEEEEEEE
T ss_pred C-----CCceeEEEECCCCEEEEEEEeC--------------CCeEEEEEeccccccccCCcEEEEEEC
Confidence 2 4589999999999999999998 567 99999999995 88999988874
No 49
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.50 E-value=1.7e-14 Score=123.00 Aligned_cols=88 Identities=14% Similarity=0.177 Sum_probs=69.6
Q ss_pred CCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC----CCCCCCcceeccccC
Q 008840 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE----SDGYAKSWFTAGFEE 171 (551)
Q Consensus 96 g~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~----~DG~p~~~~t~~~i~ 171 (551)
-.|++|+|++++||+|+ |+|.... ++++|+||...+.. +||.+ ..+..+.
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~---------------------~H~v~~~~~~~~~~~g~~~~~~~---~~~~~i~ 67 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLP---------------------PHNILFDDKQVPGASKELADKLS---HSQLMFS 67 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSC---------------------CEEEEECTTSSGGGCHHHHHHHC---EEEEECS
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCC---------------------CCeEEEeCCCCCccccccccccc---ccccccC
Confidence 46789999999999874 6798765 79999999876541 22222 3445689
Q ss_pred CCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 172 KGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 172 pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
||+++ +|.|+++.++|+||||||.| ..+||.|.|+|+|
T Consensus 68 pG~~~---~~~f~~~~~~G~y~y~C~~H------~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 68 PGESY---EITFSSDFPAGTYTYYCAPH------RGAGMVGKITVEG 105 (105)
T ss_dssp TTCEE---EEEECTTSCSEEEEEECTTT------GGGTCEEEEEECC
T ss_pred CCCeE---EEEEecCCCCeeEEEEeCCc------hhcCCEEEEEEcC
Confidence 99999 99999855899999999954 3689999999974
No 50
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.46 E-value=2.5e-14 Score=161.94 Aligned_cols=228 Identities=11% Similarity=0.093 Sum_probs=134.1
Q ss_pred CcccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC------
Q 008840 278 GKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES------ 350 (551)
Q Consensus 278 G~~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~------ 350 (551)
|-.-|.|.++. ++++++|.|... +...||. ||..+..-..||..- + ...|.||++++..+.+.+.
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~-HG~~~~~~~~dG~~~--~----~~~I~PG~~~tY~f~~~~~~gp~~~ 266 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQAS-RPYSFYS-SLISYEEDQRQGAEP--R----KNFVKPNETKTYFWKVQHHMAPTKD 266 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSS-SCCCCCB-TTCCCCCCSSSCTTT--T----SSCCCSSCEEEEECCCCSSSSCCSS
T ss_pred CCCCCeEEEEcCCEEEEEEEECCC-CCcceee-cccccccccCCCCcC--c----cCccCCCCeEEEEEEecCccCCccC
Confidence 34568999987 899999999974 5677888 787665444457642 1 2468999999998887741
Q ss_pred --CCceEEEecCCCCC--CCCCCCCCCCCCceEEEEEccCCCCCCCC-CCC-------CCCCCCC---CCCccCceeeEE
Q 008840 351 --TSDVAILANDAPYP--YPAGNPVNDANGKVMKFIILKNRETDPWR-VPE-------KLIEYPS---ADLSAASTTRYI 415 (551)
Q Consensus 351 --~g~~~~L~~~~~~~--~~~g~~~~~~~~~vm~f~v~~~~~~~~~~-lP~-------~L~~~~~---~~~~~~~~~r~~ 415 (551)
..++|+-.+..... ...| -+-.|.|.......... .+. .+..+.. .-... ..+.+
T Consensus 267 d~~~Gt~wYHsh~~~~~q~~~G--------L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~--~~~~~ 336 (770)
T 2r7e_B 267 EFDCKAWAYSSDVDLEKDVHSG--------LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTE--NMERN 336 (770)
T ss_dssp CCSEEEEEECCCSSSSHHHHTS--------CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTG--GGSSC
T ss_pred CCCCeeEEeeccCCcHHHHhCC--------ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhcc--chhhc
Confidence 22477776654210 0111 12223343321110000 000 0000000 00000 00000
Q ss_pred e-----eeec-ccCCCCcceEEEcccccCCC--CCCCcceeeeEEEEeeee--eeeeeccccCceeeeeeeeccCCccCC
Q 008840 416 A-----MYEY-TSNTGKPTHLLINAKTLEDP--VTETPKTLDQTELVNLEE--FKACMNKINDAIKCNLSKHACGKKQAV 485 (551)
Q Consensus 416 ~-----l~~~-~~~~g~~~~~~INg~~f~~~--~~~~~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~v~~~~~G~~~~~ 485 (551)
. +... .........++|||+.|... ....+...+.|.|+|... ..|++|.|+|.| .+.. .+|
T Consensus 337 ~~~p~~~~~~d~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f--~Vv~-~dg----- 408 (770)
T 2r7e_B 337 CRAPCNIQMEDPTFKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVF--TVRK-KEE----- 408 (770)
T ss_dssp SCCSSCCCSSSSSSTTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCE--ECCS-SSC-----
T ss_pred ccCccccccCCccccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEE--EEEe-cCC-----
Confidence 0 0000 00000123488999998532 111222378899999864 368899999855 3322 111
Q ss_pred CCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 486 PVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 486 ~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.|+|||.|.||++++|+|+++ +|| ||+|||+++|++.|||..|+|.
T Consensus 409 -----~~~Dtv~l~Pg~~~~v~~~ad--------------~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 409 -----YKMALYNLYPGVFETVEMLPS--------------KAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp -----CEESEEECCTTCCCEEEECCS--------------SCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred -----ceeeEEEECCCeEEEEEEEeC--------------CCCceEEEeccccccccccccccccc
Confidence 399999999999999999887 678 9999999999999999999884
No 51
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.46 E-value=8.5e-13 Score=141.14 Aligned_cols=238 Identities=10% Similarity=0.043 Sum_probs=152.3
Q ss_pred cCceeEEEEEeeec-CCCceEecCCCCCCCCCCCCCCccCCceEEECCcc-cCceeecC-eEEEEEEEecCC-CceEEEE
Q 008840 232 VFDRPLFVFDRNFL-TNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA-WPRMTVRR-RKYRFRIINASN-ARFFRFF 307 (551)
Q Consensus 232 ~~e~~lvl~d~~~~-~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~-~~~~~l~ 307 (551)
..++.|.+++..+. .+|.. ...+++||+. .|.|.++. ++++||+.|... .....+|
T Consensus 28 ~~~~~l~~~~~~~~~~~g~~--------------------~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH 87 (442)
T 2zoo_A 28 KVVINLETREQVGRIADGVE--------------------YVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNID 87 (442)
T ss_dssp EEEEEEEEEEEEEEEETTEE--------------------EEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCE
T ss_pred EEEEEEEEEEEEEEcCCCcE--------------------EEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEE
Confidence 45667777776554 23432 3589999996 79999987 899999999974 3466778
Q ss_pred EcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCC---CCCCCCCCCCCCCCceEEEEEc
Q 008840 308 FTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAP---YPYPAGNPVNDANGKVMKFIIL 384 (551)
Q Consensus 308 l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~---~~~~~g~~~~~~~~~vm~f~v~ 384 (551)
+ ||.. ..||... ...|.||+++++.+++++. ++|+...... .....| -.-.|.|.
T Consensus 88 ~-HG~~----~~dG~~~-------~~~i~pg~~~~y~f~~~~~--Gt~~yH~H~~~~~~~~~~G--------l~G~~iv~ 145 (442)
T 2zoo_A 88 L-HAVT----GPGGGAE-------SSFTAPGHTSTFNFKALNP--GLYIYHCATAPVGMHIANG--------MYGLILVE 145 (442)
T ss_dssp E-TTCC----SGGGGGG-------GCCBCTTCEEEEEEECCSC--EEEEEECCCSSHHHHHHTT--------CEEEEEEE
T ss_pred e-cCCc----CCCCCCc-------cEEECCCCEEEEEEEcCCC--eEEEEecCCCChHHHHhCc--------cEEEEEEe
Confidence 8 7854 4688643 2358999999999998763 3899887421 001112 22334454
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeec----------------cc-CCCCcceEEEcccccCCCC---CC-
Q 008840 385 KNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY----------------TS-NTGKPTHLLINAKTLEDPV---TE- 443 (551)
Q Consensus 385 ~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~----------------~~-~~g~~~~~~INg~~f~~~~---~~- 443 (551)
... .+|. . .+...+.+.++ .. ....+..++|||+.+.... ..
T Consensus 146 ~~~-----~~~~----~--------d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v 208 (442)
T 2zoo_A 146 PKE-----GLAP----V--------DREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLTA 208 (442)
T ss_dssp CTT-----CCCC----C--------SEEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTTSGGGCEEE
T ss_pred CCC-----CCCC----C--------CceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCCCCCCceEe
Confidence 321 1110 0 00111111110 00 0122346899999885321 11
Q ss_pred CcceeeeEEEEeeee-eeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCC
Q 008840 444 TPKTLDQTELVNLEE-FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFD 522 (551)
Q Consensus 444 ~~~~~~~~~l~n~~~-~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~ 522 (551)
.+...+.|+|+|... ..+.++.++|.+ .+.. .+|...+ +.++|++.+.||++++|+++|+
T Consensus 209 ~~G~~vrlrliN~~~~~~~~~~i~g~~~--~vi~-~DG~~~~-----p~~~~~~~l~pg~r~~v~v~~~----------- 269 (442)
T 2zoo_A 209 KVGETVRLYIGNGGPNLVSSFHVIGEIF--DTVY-VEGGSLK-----NHNVQTTLIPAGGAAIVEFKVE----------- 269 (442)
T ss_dssp ETTCEEEEEEEEEESSCCEEEEEETCCB--SEEE-GGGSSCE-----ECSBSEEEECTTEEEEEEEECC-----------
T ss_pred CCCCEEEEEEEeCCCCCceeeEEcCCEE--EEEe-cCCccCC-----CccceEEEECCCeeEEEEEEcC-----------
Confidence 122377899999763 456677777744 3333 4663222 4689999999999999999997
Q ss_pred CCCCCc-eEEeeccccc-cccCcccceEEc
Q 008840 523 ATAEPG-YVYHCHILDH-EDNIMMRPLKLI 550 (551)
Q Consensus 523 ~~~~pg-~~~HCHiL~H-ED~GMM~~~~V~ 550 (551)
++| |++|||.+.| ++.|||..|+|.
T Consensus 270 ---~~G~y~~~~~~~~~~~~~g~~a~l~v~ 296 (442)
T 2zoo_A 270 ---VPGTFILVDHSIFRAFNKGALAMLKVE 296 (442)
T ss_dssp ---SCEEEEEEESSTHHHHTTSCEEEEEEE
T ss_pred ---CCCeEEEEecccccccccCceEEEEec
Confidence 457 9999999999 699999999874
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.36 E-value=2e-11 Score=125.84 Aligned_cols=226 Identities=16% Similarity=0.127 Sum_probs=129.9
Q ss_pred ceEEECCc-ccCceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGK-AWPRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~-~~P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..+++||+ .-|.|.++. +++|+|+.|...+ ....+++ +|+.. .||+. +. . .|.||++++..++++
T Consensus 54 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~-h~~~~----~~~~~---~~--~--~i~pG~~~~y~f~~~ 121 (336)
T 1oe1_A 54 QAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDF-HGATG----ALGGA---KL--T--NVNPGEQATLRFKAD 121 (336)
T ss_dssp EEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEE-TTSCS----GGGGG---GG--C--CBCTTEEEEEEEECC
T ss_pred EEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceE-CCCCC----CCCCc---ce--E--EeCCCCEEEEEEECC
Confidence 58999998 578999988 8999999998743 5566777 67542 34432 11 1 399999999999987
Q ss_pred CCCCceEEEecCCCC----CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc---
Q 008840 349 ESTSDVAILANDAPY----PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT--- 421 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~----~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~--- 421 (551)
+ + ++|+....... ....| -.-.+.|..... ....++. + ...++..-+.+.++-
T Consensus 122 ~-~-Gt~~yH~h~~~~~~~~~~~G--------l~G~liV~~~~~-~~~~~~~---~------~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 122 R-S-GTFVYHCAPEGMVPWHVVSG--------MSGTLMVLPRDG-LKDPQGK---P------LHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp S-C-EEEEEECCCTTCHHHHHHTT--------CEEEEEEECTTC-CBCTTSC---B------CCCSEEEEEEEEEECCCB
T ss_pred C-C-eEEEEecCCCCchhHHHhCC--------CeEEEEEecCcC-CcccccC---c------ccCCceeEeeeeeeeecc
Confidence 6 3 48988876421 00111 122344443211 0001110 0 001111111111110
Q ss_pred cC----------------------CCCcceEEEcccccCCCCCC--CcceeeeEEEEeeeee--eeeeccccCceeeeee
Q 008840 422 SN----------------------TGKPTHLLINAKTLEDPVTE--TPKTLDQTELVNLEEF--KACMNKINDAIKCNLS 475 (551)
Q Consensus 422 ~~----------------------~g~~~~~~INg~~f~~~~~~--~~~~~~~~~l~n~~~~--~~~~~~~~~~~~~~v~ 475 (551)
+. ...+..++|||+.+...... ..+.=+.++++|.... .+....++|.+ .+.
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~--~Vi 259 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRPHLIGGHGD--WVW 259 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEETTCCEE--EEE
T ss_pred ccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCCCCcceEcCCCCEEEEEecCCCCccceEEECCcCc--eEe
Confidence 00 01234689999987432100 0010123455555432 12222345533 332
Q ss_pred eeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccc-ccCcccceEEc
Q 008840 476 KHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHE-DNIMMRPLKLI 550 (551)
Q Consensus 476 ~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HE-D~GMM~~~~V~ 550 (551)
.+|....++ ..++||+.+.||+++.|++.|+ +|| |+||||.+.|. +.|||+.|+|.
T Consensus 260 --~DG~~~~p~---~~~~dtv~i~pGer~dvlv~~~--------------~pG~y~~~~h~~~~~~~~G~~~~~~V~ 317 (336)
T 1oe1_A 260 --ETGKFANPP---QRDLETWFIRGGSAGAALYTFK--------------QPGVYAYLNHNLIEAFELGAAGHIKVE 317 (336)
T ss_dssp --TTCCTTSCC---EEEESBCCBCTTEEEEEEEECC--------------SCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred --CCCcCcCCc---cccceEEEECCCCcEEEEEEcC--------------CCceEEEEechhhccccCCCeEEEEEC
Confidence 266432221 2478999999999999999998 568 99999999986 99999999985
No 53
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.23 E-value=1.5e-10 Score=123.64 Aligned_cols=215 Identities=12% Similarity=0.088 Sum_probs=136.3
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCC-cc--eeccc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAK-SW--FTAGF 169 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~-~~--~t~~~ 169 (551)
+||+. .|+|+|++| ++|+|+.|.-... ...+|++|....- ..||.+- .+ +..-.
T Consensus 182 iNG~~-~p~l~v~~g-~~RlRliN~~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~ 239 (439)
T 2xu9_A 182 VNGAL-RPTLVAQKA-TLRLRLLNASNAR--------------------YYRLALQDHPLYLIAADGGFLEEPLEVSELL 239 (439)
T ss_dssp ETTEE-SCEEECSSS-EEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEEESCEE
T ss_pred ECCcc-CCcEEecCC-eEEEEEEecCCCc--------------------eEEEEECCceEEEEecCCCCCCCceEeceEE
Confidence 35764 799999999 9999999986652 6889999875433 2788761 21 12235
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccc--------------eEEEEEeCCCCCCCCCCCCCC--cC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGL--------------IGAYILRHPDVEAPLRLPSGD--VF 233 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL--------------~G~~iV~dp~~~~~~~lP~~~--~~ 233 (551)
|.||+++ +..+.+++ +|.||++++.......+. .|| ....+++-.....+..+|... ..
T Consensus 240 l~pgeR~---dv~v~~~~-~G~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l~~~~ 314 (439)
T 2xu9_A 240 LAPGERA---EVLVRLRK-EGRFLLQALPYDRGAMGM-MDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFP 314 (439)
T ss_dssp ECTTCEE---EEEEECCS-SEEEEEEEECCCCCCEEE-ECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCCCCCC
T ss_pred ECCceeE---EEEEEcCC-CceEEEEecccccCCccc-cccccccccccCCCCCcceeEEEEecCCCccccCcccCCCcc
Confidence 7899998 88888874 999999998643211110 122 112222211101122233210 00
Q ss_pred ce--eEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC----ceeecC-eEEEEEEEecCCCceEEE
Q 008840 234 DR--PLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRF 306 (551)
Q Consensus 234 e~--~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l 306 (551)
+. +-.-..+.+. . +..+..++|||+.+. .+.++. ++++|+|.|.+.. ...+
T Consensus 315 ~l~~~~~~r~~~l~--------~-------------~~~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~~-~HP~ 372 (439)
T 2xu9_A 315 TLPAPVVTRRLVLT--------E-------------DMMAARFFINGQVFDHRRVDLKGQAQTVEVWEVENQGDM-DHPF 372 (439)
T ss_dssp CCCCCSEEEEEEEE--------E-------------EGGGTEEEETTBCCCTTCCCEEECTTCEEEEEEEECSSS-CEEE
T ss_pred cCCCCCcceEEEEE--------e-------------eccCceEeECCEECCCCCCceecCCCCEEEEEEEcCCCC-CCCc
Confidence 00 0000000000 0 001347889999864 356666 8999999998743 3455
Q ss_pred EEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 307 FFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 307 ~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|| ||+.|+|++.+|+..+.|...|++.+.||+++.|.++++. +| .+.+...
T Consensus 373 HL-HG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn-pG-~w~~HCH 423 (439)
T 2xu9_A 373 HL-HVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE-KG-RTVFHCH 423 (439)
T ss_dssp EE-SSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS-CE-EEEEEES
T ss_pred ee-CCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC-CC-CEEEECC
Confidence 66 8999999999999887788999999999999999999654 34 6766654
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.11 E-value=1e-09 Score=117.47 Aligned_cols=215 Identities=9% Similarity=0.011 Sum_probs=124.9
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEee-CCCCCCC-CCCCCCC---cceecc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHL-HGGIDEP-ESDGYAK---SWFTAG 168 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~-HG~~~~~-~~DG~p~---~~~t~~ 168 (551)
+||+ +.|+|+|++| ++|+|+.|..... ..++|+ ||....- ..||.+- ..+...
T Consensus 187 iNG~-~~p~~~v~~g-~~RlRliNa~~~~--------------------~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l 244 (451)
T 2uxt_A 187 VNGV-QSPYVEVSRG-WVRLRLLNASNSR--------------------RYQLQMNDGRPLHVISGDQGFLPAPVSVKQL 244 (451)
T ss_dssp ETTE-ESCEEEECSS-EEEEEEEECCSSC--------------------CEEEEETTSCCEEEEECSSSEEEEEEEESSE
T ss_pred ECCc-ccceEEecCC-EEEEEEEccCCce--------------------eEEEEECCCCeEEEEEeCCCccCCceEeceE
Confidence 3575 5799999999 9999999987652 688999 8865432 3789641 112334
Q ss_pred ccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCC
Q 008840 169 FEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNG 248 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g 248 (551)
.|.||+++ ++-+.++ ++|+||++++.... . ...+.|.. ++. . . .....++ .+.-....
T Consensus 245 ~l~pgeR~---dvlv~~~-~~~~~~l~~~~~~~-~---~~~~~~~~---~~~-~------~--~~~~~il--~~~~~~~~ 302 (451)
T 2uxt_A 245 SLAPGERR---EILVDMS-NGDEVSITCGEAAS-I---VDRIRGFF---EPS-S------I--LVSTLVL--TLRPTGLL 302 (451)
T ss_dssp EECTTCEE---EEEEECT-TCCCEEEEC-----------------------C-C------C--CSCCEEE--EEEECSCC
T ss_pred EECceeEE---EEEEEeC-CCCEEEEEecCccc-c---cccccccc---ccC-C------C--CCCcceE--EEEecCCC
Confidence 68899998 8888886 57999999986421 1 01111100 000 0 0 0000010 00000000
Q ss_pred ce---EecCCCCCC--CCCCCCCC----ccCCceEEECCcccC----ceeecC-eEEEEEEEecCCCceEEEEEcCCceE
Q 008840 249 SI---YMNSTGNNP--SIHPQWQP----EYFGDVIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFTNGLRF 314 (551)
Q Consensus 249 ~~---~~~~~g~~~--~~~~~~~~----~~~gd~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~ 314 (551)
.. ..+.. ..+ ........ .+.+ .++|||+.++ .+.++. ++++|+|.|. -...+|| ||+.|
T Consensus 303 ~~~~~~~p~~-L~~~~~~~~~~~~~~~~~l~~-~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~---~~HP~HL-HGh~F 376 (451)
T 2uxt_A 303 PLVTDSLPMR-LLPTEIMAGSPIRSRDISLGD-DPGINGQLWDVNRIDVTAQQGTWERWTVRAD---EPQAFHI-EGVMF 376 (451)
T ss_dssp C----CCCSC-SSSSCCCCCCCSEEEEEEECS-SSSBTTBCCCTTCCCEEEETTCEEEEEEEEE---EEEEEEE-TTCEE
T ss_pred cCccccCccc-cCCCCCCCCCCcceEEEEEee-EEEECCEeCCCCCCcEEcCCCCEEEEEEECC---CCcCeEE-CCceE
Confidence 00 00000 000 00000000 0001 4679999864 466776 8999999998 2456677 89999
Q ss_pred EEEEcCCCCCC--CceEecEEEEccCceEEEEEEcCCCCC--ceEEEecC
Q 008840 315 IHVGSDSAYLG--KPVVTNDTVLAPAEIADVVIDFSESTS--DVAILAND 360 (551)
Q Consensus 315 ~via~DG~~l~--~P~~~~~l~l~pgeR~dVlv~~~~~~g--~~~~L~~~ 360 (551)
+|++.||..++ .|...|++.+ |+++.|.++++++.. +.+.+...
T Consensus 377 ~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCH 424 (451)
T 2uxt_A 377 QIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQ 424 (451)
T ss_dssp EEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEES
T ss_pred EEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCC
Confidence 99999998764 4678899999 999999999987531 23666653
No 55
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.09 E-value=2.1e-09 Score=116.58 Aligned_cols=228 Identities=13% Similarity=0.098 Sum_probs=133.6
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCCc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPTW 176 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~~ 176 (551)
.|+|+|++|+++|+|+.|..... ...+|++|....- ..||.+-.++. .-.|.||+++
T Consensus 184 ~~~~~v~~g~~~RlRliN~~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 184 LSIVNVEQGKKYRMRLISLSCDP--------------------NWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEE
T ss_pred ceEEEEcCCCEEEEEEEecCCcc--------------------cEEEEEcCceEEEEeccCccccccccCeEEEcccceE
Confidence 39999999999999999986652 5788988875432 37887532222 1247899998
Q ss_pred ceeeEEEEcCccCceeEEeccCC-Cchh--hhhhccceEEEEEeCCCCC-CCC--CCCCCCcCceeEEEEEeeecCCCce
Q 008840 177 TNETYHYHNMQQPGNTWYHDHTM-GLTR--VNLLAGLIGAYILRHPDVE-APL--RLPSGDVFDRPLFVFDRNFLTNGSI 250 (551)
Q Consensus 177 ~~~~y~f~~~~~~Gt~wYH~H~~-g~t~--~qv~~GL~G~~iV~dp~~~-~~~--~lP~~~~~e~~lvl~d~~~~~~g~~ 250 (551)
+..+.+++.+|.||.+++.. +... .....|+..+++..+.... .+. ..|.. .. +.+..+..-...
T Consensus 244 ---dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~----~~--l~~~~l~p~~~~ 314 (503)
T 1hfu_A 244 ---SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP----AQ--LNEADLHALIDP 314 (503)
T ss_dssp ---EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC----CB--CCGGGCBBSSSC
T ss_pred ---EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc----CC--CccccccccCcc
Confidence 88888877789999999864 2111 0122344444444322211 010 01110 00 000000000000
Q ss_pred EecCCCCCCCCCC---CCCCccCCceEEECCcccC-------------------------ceeecC-eEEEEEEEecCCC
Q 008840 251 YMNSTGNNPSIHP---QWQPEYFGDVIVVNGKAWP-------------------------RMTVRR-RKYRFRIINASNA 301 (551)
Q Consensus 251 ~~~~~g~~~~~~~---~~~~~~~gd~~lVNG~~~P-------------------------~~~v~~-~~~RlRllNas~~ 301 (551)
..+. ...+.... ....+..+..++|||+.+. .+.++. ++++++|+|....
T Consensus 315 ~~p~-~~~~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~ 393 (503)
T 1hfu_A 315 AAPG-IPTPGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLG 393 (503)
T ss_dssp SCSS-CSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTT
T ss_pred CCCC-cccCCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCC
Confidence 0000 00000000 0000112337889998762 134565 7999999954323
Q ss_pred ceEEEEEcCCceEEEEEcCCCC---CCCceEecEEEE-ccCceEEEEEEcCCCCCceEEEecC
Q 008840 302 RFFRFFFTNGLRFIHVGSDSAY---LGKPVVTNDTVL-APAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 302 ~~~~l~l~~g~~~~via~DG~~---l~~P~~~~~l~l-~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
....+|| ||+.|+|++.+|+. +..|...|++.+ .||+++.|.++++++ | .+.+...
T Consensus 394 ~~HP~HL-HGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnP-G-~W~~HCH 453 (503)
T 1hfu_A 394 GPHPFHL-HGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNP-G-PWFFHCH 453 (503)
T ss_dssp CCCEEEE-TTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSC-E-EEEEEES
T ss_pred CCCCEEE-ecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCC-e-eeeEecC
Confidence 3445566 89999999999975 346889999999 799999999988764 3 6777664
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.08 E-value=5.9e-09 Score=113.56 Aligned_cols=225 Identities=12% Similarity=0.065 Sum_probs=132.2
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCCcc
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPTWT 177 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~~~ 177 (551)
|+|+|++|+++|+|+.|.-... ...+|++|....- ..||.+-.++. .-.|.||+++
T Consensus 212 ~~~~v~~G~~~RlRliNa~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~- 270 (521)
T 1v10_A 212 AVVSVQSGKRYRFRIVSTSCFP--------------------NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRY- 270 (521)
T ss_dssp CEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEE-
T ss_pred eEEEECCCCEEEEEEEecCCcc--------------------cEEEEECCCeEEEEecCCccccceeeeeEEEcccceE-
Confidence 8999999999999999986652 5789998875432 27887532221 1247899998
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCC
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGN 257 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~ 257 (551)
+..+.+++.+|.||.+++.... ......|+..+++..+..... .|.....+ .-.+.+..+..-.....+. ..
T Consensus 271 --dvlv~~~~~~g~y~i~~~~~~~-~~~~~~~~~~ail~y~~~~~~---~p~~~~~~-~~~~~~~~l~p~~~~~~p~-~~ 342 (521)
T 1v10_A 271 --SVVVEANQAVGNYWIRANPSNG-RNGFTGGINSAIFRYQGAAVA---EPTTSQNS-GTALNEANLIPLINPGAPG-NP 342 (521)
T ss_dssp --EEEEECCSCSSEEEEEEEESSS-SCSCGGGTTEEEEEETTCCSC---CCCCCCCC-SCBCCGGGCCBSSCCCCSS-CS
T ss_pred --EEEEEcCCCCCceeeeeccccc-cccCCCCceeEEEEECCCCCC---CCCCCCCc-ccccchhhcccCCcccCCC-cc
Confidence 8888887778999999986421 011223454455544322110 01100000 0000000000000000000 00
Q ss_pred CCCCCC---CCCCccCCc--eEEECCcccC-------------------------ceeecC-eEEEEEEEecCCCceEEE
Q 008840 258 NPSIHP---QWQPEYFGD--VIVVNGKAWP-------------------------RMTVRR-RKYRFRIINASNARFFRF 306 (551)
Q Consensus 258 ~~~~~~---~~~~~~~gd--~~lVNG~~~P-------------------------~~~v~~-~~~RlRllNas~~~~~~l 306 (551)
.+.... ....++.+. .++|||+.+. .+.++. ++++++|+| +..++|
T Consensus 343 ~~~~~~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N-~~~HP~-- 419 (521)
T 1v10_A 343 VPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG-GGNHPF-- 419 (521)
T ss_dssp STTCSSEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC-CBSCEE--
T ss_pred cCCcceEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC-CCCCCE--
Confidence 000000 000001122 5788998762 245665 899999999 555555
Q ss_pred EEcCCceEEEEEcCCCC---CCCceEecEEEE-ccCceEEEEEEcCCCCCceEEEecC
Q 008840 307 FFTNGLRFIHVGSDSAY---LGKPVVTNDTVL-APAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 307 ~l~~g~~~~via~DG~~---l~~P~~~~~l~l-~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|| ||+.|+|++.+|+. +..|...|++.+ .||+++.|.++++++ | .+.+...
T Consensus 420 HL-HGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNP-G-~W~~HCH 474 (521)
T 1v10_A 420 HL-HGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNP-G-PWFLHCH 474 (521)
T ss_dssp EE-SSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSC-E-EEEEEES
T ss_pred EE-ccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCC-e-eEEEeeC
Confidence 45 89999999999975 346889999999 799999999987764 3 6777654
No 57
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.06 E-value=2.7e-10 Score=103.94 Aligned_cols=87 Identities=20% Similarity=0.266 Sum_probs=59.1
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC--------CCCCCCcceeccc
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE--------SDGYAKSWFTAGF 169 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~--------~DG~p~~~~t~~~ 169 (551)
.++|+|+|++||+|+|+++|.... ..|.+.+..... ++..++..+.+ .
T Consensus 58 ~~~p~i~V~~GD~V~~~~tN~~~~-----------------------~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~ 113 (154)
T 2cal_A 58 KKNPTLEIPAGATVDVTFINTNKG-----------------------FGHSFDITKKGPPYAVMPVIDPIVAGTGFSP-V 113 (154)
T ss_dssp EESCEEEECTTCEEEEEEEECCTT-----------------------CCCCCEEESCCSCCCSSCCCCSEEEEBCCCC-C
T ss_pred CCCCEEEEeCCCEEEEEEEcCCCC-----------------------eeeEEEEeecCcchhcccccccccccccccc-c
Confidence 478999999999999999996321 123333322111 11111100111 5
Q ss_pred cCCCC--CcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 170 EEKGP--TWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 170 i~pG~--~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
|.||+ +. +|.|++ ++|+||||||..+ |..+||+|.|+|+
T Consensus 114 i~PG~sgt~---t~tft~--~pGtY~y~C~~~g----H~~~GM~G~IiV~ 154 (154)
T 2cal_A 114 PKDGKFGYT---DFTWHP--TAGTYYYVCQIPG----MAATGMFGKIVVK 154 (154)
T ss_dssp CBTTBEEEE---EEEECC--CSEEEEEECCSTT----TGGGTCEEEEEEC
T ss_pred cCCCCceEE---EEEEEE--CCceEEEECCCCC----HHHCCCEEEEEEC
Confidence 78999 66 899997 8999999999754 5679999999985
No 58
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.05 E-value=3.9e-10 Score=96.08 Aligned_cols=76 Identities=20% Similarity=0.305 Sum_probs=59.1
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcc
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWT 177 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~ 177 (551)
|-.++|++++||+|+ |.|.... ++++|+++. +||.+. +.++.+.||+++
T Consensus 30 F~P~~i~v~~Gd~V~--~~N~d~~---------------------~H~v~~~~~-----~~g~~~--~~~~~~~pG~~~- 78 (105)
T 2ov0_A 30 YETPELHVKVGDTVT--WINREAM---------------------PHNVHFVAG-----VLGEAA--LKGPMMKKEQAY- 78 (105)
T ss_dssp ESSSEEEECTTCEEE--EEECSSS---------------------CBCCEECTT-----TSSSSC--EECCCBCTTEEE-
T ss_pred EcCCEEEECCCCEEE--EEECCCC---------------------CEEEEEcCC-----CCCccc--ccccccCCCCEE-
Confidence 347899999999965 5688654 688998863 256543 555568899988
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.| ..+|+|||||+.|. ||.|.|+|+
T Consensus 79 --~~tf---~~~G~y~y~C~~H~--------gM~G~i~V~ 105 (105)
T 2ov0_A 79 --SLTF---TEAGTYDYHCTPHP--------FMRGKVVVE 105 (105)
T ss_dssp --EEEE---CSCEEEEEECSSCT--------TCEEEEEEC
T ss_pred --EEEe---CCCEEEEEEeCCCC--------CCEEEEEEC
Confidence 7877 38999999999973 899999985
No 59
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.04 E-value=5.1e-10 Score=96.39 Aligned_cols=84 Identities=17% Similarity=0.068 Sum_probs=64.6
Q ss_pred EEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCccee
Q 008840 87 FAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFT 166 (551)
Q Consensus 87 ~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t 166 (551)
.+|+ +.++++.|++++||+|+++++|.... .+++++.+. | ++
T Consensus 29 ~~~~-----~~f~p~~i~v~~G~~V~~~~~n~d~~---------------------~H~~~i~~~-------~-----~~ 70 (112)
T 1iby_A 29 RAFN-----VLNEPETLVVKKGDAVKVVVENKSPI---------------------SEGFSIDAF-------G-----VQ 70 (112)
T ss_dssp EEEE-----EEEESCEEEEETTCEEEEEEEECSSS---------------------CEEEEEGGG-------T-----EE
T ss_pred EEEe-----eEEcCCEEEEeCCCEEEEEEEECCCC---------------------eEEEEEcCC-------C-----ce
Confidence 3666 67789999999999999999998643 344444322 2 22
Q ss_pred ccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 167 AGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 167 ~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
..+.||+++ +|.|+++ ++|+||||||.|+.. .+|.|.++|+|
T Consensus 71 -~~i~pG~~~---~~~f~~~-~~G~y~~~C~~~~~~-----~~M~g~i~V~~ 112 (112)
T 1iby_A 71 -EVIKAGETK---TISFTAD-KAGAFTIWCQLHPKN-----IHLPGTLNVVE 112 (112)
T ss_dssp -EEECTTCEE---EEEEECC-SCEEEEEBCSSSCTT-----TBCCEEEEEEC
T ss_pred -eEeCCCCEE---EEEEECC-CCEEEEEECCCCCch-----HHCEEEEEEeC
Confidence 257899999 9999986 899999999998642 34999999974
No 60
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.01 E-value=1.1e-10 Score=127.20 Aligned_cols=94 Identities=12% Similarity=0.070 Sum_probs=70.6
Q ss_pred CccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC
Q 008840 83 PTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK 162 (551)
Q Consensus 83 ~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~ 162 (551)
...+|+|+ ++|++|+|++++||+|+++++|.+... ...++++.++. |.
T Consensus 500 ~V~m~~~n-----~~f~pp~I~V~~Gd~V~~~ltN~d~~~------------------Dv~Hgf~ip~~-------gv-- 547 (595)
T 1fwx_A 500 RVYMSSVA-----PSFSIESFTVKEGDEVTVIVTNLDEID------------------DLTHGFTMGNY-------GV-- 547 (595)
T ss_dssp EEEEEEET-----TEESCSEEEEETTCEEEEEEEECCCST------------------TCCEEEEETTT-------TE--
T ss_pred ceeEEEec-----CcccCCEEEEECCCEEEEEEEeCCCCC------------------CceeeEEecCC-------Cc--
Confidence 45678987 999999999999999999999986531 01344444432 22
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
. ..+.||+++ +|.|.++ ++|+||||||..... .| .||+|.|+|+++
T Consensus 548 ---~-~~i~PG~t~---t~~Fta~-~pGtY~yhC~e~Cg~-~H--~gM~G~IiV~p~ 593 (595)
T 1fwx_A 548 ---A-MEIGPQMTS---SVTFVAA-NPGVYWYYCQWFCHA-LH--MEMRGRMLVEPK 593 (595)
T ss_dssp ---E-EEECTTCEE---EEEEECC-SCEEEEEECCSCCST-TC--TTCEEEEEEECC
T ss_pred ---c-eeeCCCCeE---EEEEECC-CCEEEEEECCCCCCC-Cc--cCCEEEEEEEcC
Confidence 1 247899998 9999996 999999999953332 23 399999999943
No 61
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.83 E-value=7.6e-08 Score=103.94 Aligned_cols=232 Identities=11% Similarity=0.065 Sum_probs=130.2
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCC
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPT 175 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~ 175 (551)
+-|+|+|++|+++|+|+.|.-... ...+|++|....- ..||.+-.++. .-.|.||++
T Consensus 187 ~~~~~~v~~G~~~RlRliN~~~~~--------------------~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 187 PLSVITVEVGKRYRMRLVSISCDP--------------------NYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CCCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCE
T ss_pred CceEEEEcCCCEEEEEEEecCCCe--------------------eEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceE
Confidence 457999999999999999975542 5788888865322 37887643332 124789999
Q ss_pred cceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeE-EEEEeeecCCCceEecC
Q 008840 176 WTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPL-FVFDRNFLTNGSIYMNS 254 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~l-vl~d~~~~~~g~~~~~~ 254 (551)
+ +.-+.+++.+|.||.++..... ......|..-+++..+.... . .|......... .+.+..+..-.....+.
T Consensus 247 ~---dvlv~~~~~~g~y~i~a~~~~~-~~~~~~~~~~ail~Y~~~~~-~--~p~~~~~~~~~~~~~~~~L~p~~~~~~p~ 319 (495)
T 3t6v_A 247 Y---SFVLNANQPVGNYWIRANPNSG-GEGFDGGINSAILRYDGATT-A--DPVTVASTVHTKCLIETDLHPLSRNGVPG 319 (495)
T ss_dssp E---EEEEECCSCSSEEEEEEEESSS-SCSCGGGTTEEEEEETTSCS-S--CCCCCCCSSCSSBCCGGGCCBSSCCCCSS
T ss_pred E---EEEEECCCCCceEEEEEecccC-ccccCCCceEEEEEECCCCC-C--CCCCCCCCCCccccccccccccccccCCC
Confidence 8 8888888778999999874211 01112333334444432211 0 01100000000 00000000000000000
Q ss_pred CCC--CCCCCCCCCCccCCceEEECCcccC-------------------------ceeecC-eEEEEEEEecCCCceEEE
Q 008840 255 TGN--NPSIHPQWQPEYFGDVIVVNGKAWP-------------------------RMTVRR-RKYRFRIINASNARFFRF 306 (551)
Q Consensus 255 ~g~--~~~~~~~~~~~~~gd~~lVNG~~~P-------------------------~~~v~~-~~~RlRllNas~~~~~~l 306 (551)
... ..+..-...-++.+..++|||+.+. .+.++. ++++|.|.|........+
T Consensus 320 ~~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~ 399 (495)
T 3t6v_A 320 NPHQGGADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPF 399 (495)
T ss_dssp CSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEE
T ss_pred ccCCCCCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcce
Confidence 000 0000000000112346889998651 145555 799999984332334456
Q ss_pred EEcCCceEEEEEcCCCCC---CCceEecEEEEcc-CceEEEEEEcCCCCCceEEEecC
Q 008840 307 FFTNGLRFIHVGSDSAYL---GKPVVTNDTVLAP-AEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 307 ~l~~g~~~~via~DG~~l---~~P~~~~~l~l~p-geR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|| |||.|+|++.+|... ..|...|++.+.+ |+.+.|-++++++ | .+.++..
T Consensus 400 HL-HGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnP-G-~W~~HCH 454 (495)
T 3t6v_A 400 HL-HGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP-G-PWFLHCH 454 (495)
T ss_dssp EE-TTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSC-E-EEEEEES
T ss_pred ee-cCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCC-e-eEEEEec
Confidence 66 899999999988643 3588899999997 9999888877765 3 6666654
No 62
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.83 E-value=3.9e-09 Score=89.70 Aligned_cols=85 Identities=12% Similarity=0.124 Sum_probs=60.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCc--ceeccccCCCCCcc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKS--WFTAGFEEKGPTWT 177 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~--~~t~~~i~pG~~~~ 177 (551)
-++|++++||+|+ |.|.... ++++|+|+...+. .+|.... ......+.||+++
T Consensus 19 P~~i~v~~Gd~V~--~~n~~~~---------------------~H~~~~~~~~~~~-~~g~~~~~~~~~~~~~~pG~~~- 73 (106)
T 2gim_A 19 PAKLTIKPGDTVE--FLNNKVP---------------------PHNVVFDAALNPA-KSADLAKSLSHKQLLMSPGQST- 73 (106)
T ss_dssp SSEEEECTTCEEE--EEECSSS---------------------CCCBEECSSSSTT-CCHHHHHHHCBCSCCCSTTCEE-
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CceEEEeCCCCcc-cccccchhccccceeeCCCCEE-
Confidence 4799999999865 5587543 6888888765432 2332100 0122247899998
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.|+++..+|+||||||.| ..+||.|.|+|+
T Consensus 74 --~~~f~~~~~~G~y~y~C~~H------~~~GM~G~i~V~ 105 (106)
T 2gim_A 74 --STTFPADAPAGEYTFYCEPH------RGAGMVGKITVA 105 (106)
T ss_dssp --EEECCTTCCSEEEEEECTTT------GGGTCEEEEEEC
T ss_pred --EEEEecCCCCceEEEEeCCh------hhcCcEEEEEEc
Confidence 89998745899999999944 458999999997
No 63
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=98.82 E-value=2.7e-07 Score=101.17 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=57.3
Q ss_pred eeecC-eEEEEEEEecCCC-----ceEEEEEcCCceEEEEEcC-CCC---------CCCceEecEEEEccCceEEEEEEc
Q 008840 284 MTVRR-RKYRFRIINASNA-----RFFRFFFTNGLRFIHVGSD-SAY---------LGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 284 ~~v~~-~~~RlRllNas~~-----~~~~l~l~~g~~~~via~D-G~~---------l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
+.++. ++++|.|.|.+.. ....+|| |||.|+|++.. |.+ +..|...|++.+.||+.+.|.+++
T Consensus 419 ~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HL-HGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~a 497 (552)
T 1aoz_A 419 YQFKIGEVVDVILQNANMMKENLSETHPWHL-HGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 497 (552)
T ss_dssp EEECTTCEEEEEEEECCCSSTTCCCCEEEEE-TTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred EEecCCCEEEEEEeCCcccccccCCCCCEEE-cCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEc
Confidence 55665 8999999998742 2456677 89999999984 553 346888999999999999999988
Q ss_pred CCCCCceEEEecC
Q 008840 348 SESTSDVAILAND 360 (551)
Q Consensus 348 ~~~~g~~~~L~~~ 360 (551)
+++ | .+.++..
T Consensus 498 DNP-G-~W~~HCH 508 (552)
T 1aoz_A 498 DNP-G-VWAFHCH 508 (552)
T ss_dssp CSC-E-EEEEEES
T ss_pred CCC-e-EEEEEee
Confidence 765 3 6666654
No 64
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.78 E-value=1.1e-07 Score=101.43 Aligned_cols=199 Identities=11% Similarity=0.035 Sum_probs=119.3
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEee--CC---CCCC-CCCCCCCCc-ce-
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHL--HG---GIDE-PESDGYAKS-WF- 165 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~--HG---~~~~-~~~DG~p~~-~~- 165 (551)
+||+ +.|+|+|++| ++|+|+.|.-... ...+|+ +| .... -..||.+-. ++
T Consensus 174 iNG~-~~p~~~v~~g-~~RlRliNa~~~~--------------------~~~~~i~~~~~~~~~~~via~DG~~~~~P~~ 231 (448)
T 3aw5_A 174 VNGV-KDAVFKLSGG-SYRLRLVNGSNAR--------------------LYMLSIVKKNGDVVPMRLIAVDQGFLARPIE 231 (448)
T ss_dssp ETTE-ETCEEEEEEE-EEEEEEEECSSSC--------------------CEEEEEEETTSCEECEEEEEETTEEEEEEEE
T ss_pred ECCc-ccceEEECCC-eEEEEEEcCCCcc--------------------eEEEEEEcCCCCCccEEEEEeCCCccCCceE
Confidence 3575 4699999999 9999999986652 688999 87 3221 127887522 11
Q ss_pred -eccccCCCCCcceeeEEEEcCccCceeEEeccCCCch-hh--hh------hccceEEEEEe--CCCCC-CCCCC---CC
Q 008840 166 -TAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLT-RV--NL------LAGLIGAYILR--HPDVE-APLRL---PS 229 (551)
Q Consensus 166 -t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t-~~--qv------~~GL~G~~iV~--dp~~~-~~~~l---P~ 229 (551)
..-.+.||+++ +.-+.++ .+.||...+..... .. .+ ...-....+++ +.... .+..| |.
T Consensus 232 ~~~l~l~pgeR~---dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~ 306 (448)
T 3aw5_A 232 VRALFLAPAERA---EVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPP 306 (448)
T ss_dssp ESCEEECTTCEE---EEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCC
T ss_pred eceEEECCcceE---EEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCC
Confidence 22247899987 6666664 47889888764310 00 00 00001111111 11100 00001 10
Q ss_pred C---CcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC----cee-ecC-eEEEEEEEecCC
Q 008840 230 G---DVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP----RMT-VRR-RKYRFRIINASN 300 (551)
Q Consensus 230 ~---~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P----~~~-v~~-~~~RlRllNas~ 300 (551)
. ...++.+.|. .....++|||+.+. .+. ++. ++++|+|.|.+.
T Consensus 307 ~~~~~~~~~~~~l~----------------------------~~~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~ 358 (448)
T 3aw5_A 307 EPPKPTRTRRFALS----------------------------LSGMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDKA 358 (448)
T ss_dssp CCCCCSEEEEEEEE----------------------------EETTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECSS
T ss_pred CCCCCCceEEEEEe----------------------------CCCceeeECCCcCCCCCCceeccCCCCeEEEEEEcCCC
Confidence 0 0000001000 00125889999863 356 666 899999999884
Q ss_pred CceEEEEEcCCceEEEEEcCCCCC--------------CCceEecEEEEccCceEEEEEEcC
Q 008840 301 ARFFRFFFTNGLRFIHVGSDSAYL--------------GKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 301 ~~~~~l~l~~g~~~~via~DG~~l--------------~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
.....+|| ||+.|+|++.+|... ..|...|++.+.||+++.|++.|.
T Consensus 359 ~~~HP~HL-HG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~ 419 (448)
T 3aw5_A 359 SMPHPMHL-HGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFD 419 (448)
T ss_dssp SCCEEEEE-SSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEEC
T ss_pred CCCcCEEE-CCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEec
Confidence 34456667 899999999998763 123578999999999999998887
No 65
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.75 E-value=2.8e-07 Score=99.01 Aligned_cols=221 Identities=12% Similarity=0.096 Sum_probs=128.7
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCC-c--ceeccc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAK-S--WFTAGF 169 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~-~--~~t~~~ 169 (551)
.||+. .|+|.|++|+ |+|+.|.-... ...+|++|....- ..||..- . .+..-.
T Consensus 216 vNG~~-~p~l~v~~g~--RlRliNa~~~~--------------------~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~ 272 (481)
T 3zx1_A 216 INGQF-KPKIKLATNE--RIRIYNATAAR--------------------YLNLRIQGAKFILVGTDGGLIEKTIYKEELF 272 (481)
T ss_dssp ETTEE-SCEEEEETTE--EEEEEECCSSC--------------------CEEEEETTCEEEEEEETTEEEEEEEEESSEE
T ss_pred ECCcc-CceEEecCCC--EEEEEecCCCe--------------------EEEEEECCCceEEEEcCCCccCCceEeCeEE
Confidence 35754 6899999999 99999986653 6889999876332 2787431 1 112235
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchh--hhhh--ccceEEEEEeCCCCCCCCC---CCC--CCcCceeEEEE
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR--VNLL--AGLIGAYILRHPDVEAPLR---LPS--GDVFDRPLFVF 240 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~--~qv~--~GL~G~~iV~dp~~~~~~~---lP~--~~~~e~~lvl~ 240 (551)
|.||+++ +.-+... +.++|..-++..+... .... .....-+-+.......+.. +|. ..+.++.+.++
T Consensus 273 l~pgeR~---dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~ 348 (481)
T 3zx1_A 273 LSPASRV---EVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMS 348 (481)
T ss_dssp ECTTCEE---EEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEE
T ss_pred ECCccEE---EEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEe
Confidence 7899988 7777775 5777777665432100 0000 0000111122100000100 111 00112222221
Q ss_pred EeeecCCCceEecCCCCCCCCCCCCCCccC------CceEEECCcccC----ceeecC-eEEEEEEEecCCCceEEEEEc
Q 008840 241 DRNFLTNGSIYMNSTGNNPSIHPQWQPEYF------GDVIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFT 309 (551)
Q Consensus 241 d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~------gd~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l~l~ 309 (551)
. +.. ...+.+. .+.. +..++|||+.+. .+.++. ++++|+|.|.+. ....+||
T Consensus 349 ~-----~~~---~~~~~~~-------~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~-~~Hp~Hl- 411 (481)
T 3zx1_A 349 E-----DHM---QMHGMMG-------KSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSH-MDHPFHI- 411 (481)
T ss_dssp E-----CCS---TTTTGGG-------CCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSS-SCEEEEE-
T ss_pred c-----cch---hcccccc-------cccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCC-CceeEEE-
Confidence 1 100 0000000 0000 124899999873 567777 899999999763 4567777
Q ss_pred CCceEEEEEc--CCCCCC--CceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 310 NGLRFIHVGS--DSAYLG--KPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 310 ~g~~~~via~--DG~~l~--~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
||+.|+|++. ||.... ++...|++.|.|||++.|.++|+.+ | .|.+...
T Consensus 412 HG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~p-G-~w~~HCH 464 (481)
T 3zx1_A 412 HGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFK-G-LRMYHCH 464 (481)
T ss_dssp TTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCSC-E-EEEEEES
T ss_pred eccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCCC-e-eEEEEcC
Confidence 8999999999 887542 3677999999999999999999654 4 6766653
No 66
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.73 E-value=8.6e-07 Score=97.23 Aligned_cols=76 Identities=16% Similarity=0.120 Sum_probs=57.3
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCCc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPTW 176 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~~ 176 (551)
-|+|+|++|+++|+|+.|.-... ...+|++|....- ..||.+-.++. .-.|.||+++
T Consensus 214 ~~~~~v~~g~~~RlRliNa~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 214 YANVTLTPGKRHRLRILNTSTEN--------------------HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp CCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEE
T ss_pred ceEEEEcCCCEEEEEEEecCCCc--------------------eEEEEECCCceEEEecCCcccCceEeCeEEEccEEEE
Confidence 37999999999999999987652 5789998875432 27887622221 1247899988
Q ss_pred ceeeEEEEcCccCceeEEeccC
Q 008840 177 TNETYHYHNMQQPGNTWYHDHT 198 (551)
Q Consensus 177 ~~~~y~f~~~~~~Gt~wYH~H~ 198 (551)
+.-+.+++.+|.||.....
T Consensus 274 ---dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 274 ---DVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp ---EEEEECCSCSSEEEEEEEC
T ss_pred ---EEEEECCCCCCcEEEEEEe
Confidence 8888887778999998875
No 67
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.71 E-value=1.3e-06 Score=95.33 Aligned_cols=215 Identities=12% Similarity=0.073 Sum_probs=126.6
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCcce--ecccc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWF--TAGFE 170 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~--t~~~i 170 (551)
+||+. .|+|+|++|+++|+|+.|.-... ...+|++|....- ..||.+-.++ ..-.|
T Consensus 172 iNG~~-~~~~~v~~g~~~RlRliNa~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l 230 (534)
T 1zpu_A 172 VNNTM-NLTWEVQPDTTYLLRIVNVGGFV--------------------SQYFWIEDHEMTVVEIDGITTEKNVTDMLYI 230 (534)
T ss_dssp ETTBS-SCEEECCSSCEEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEESCEEE
T ss_pred ECCCC-ceEEEEECCCEEEEEEEeccCCc--------------------eEEEEEcCCeeEEEeccCcCccccEeceEEE
Confidence 35764 69999999999999999986652 5778888764332 2788753222 11247
Q ss_pred CCCCCcceeeEEEEcCcc-CceeEEeccCCCchhhh-h--hccceE-EEEEeCCCCCCCC-----CCCC-C---------
Q 008840 171 EKGPTWTNETYHYHNMQQ-PGNTWYHDHTMGLTRVN-L--LAGLIG-AYILRHPDVEAPL-----RLPS-G--------- 230 (551)
Q Consensus 171 ~pG~~~~~~~y~f~~~~~-~Gt~wYH~H~~g~t~~q-v--~~GL~G-~~iV~dp~~~~~~-----~lP~-~--------- 230 (551)
.||+++ +.-+.+++. .|.||........ ... + .....+ +++..+.....+. .++. -
T Consensus 231 ~~gqR~---dvlv~~~~~~~~~y~i~~~~~~~-~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~ 306 (534)
T 1zpu_A 231 TVAQRY---TVLVHTKNDTDKNFAIMQKFDDT-MLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYE 306 (534)
T ss_dssp CTTCEE---EEEEECCSCSSCCEEEEEEECGG-GSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSS
T ss_pred CccceE---EEEEEcCCCCCCcEEEEEecccc-ccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCC
Confidence 899988 777777644 5789998875321 000 0 001122 2322211100000 0000 0
Q ss_pred -----CcCceeEEEEEeeec--CCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC---------------------
Q 008840 231 -----DVFDRPLFVFDRNFL--TNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP--------------------- 282 (551)
Q Consensus 231 -----~~~e~~lvl~d~~~~--~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P--------------------- 282 (551)
...+..+.+.- .+. .+| ..+++|||+.+.
T Consensus 307 ~~~~~~~~~~~~~l~~-~~~~~~~~----------------------~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~ 363 (534)
T 1zpu_A 307 KEAIYGEPDHVITVDV-VMDNLKNG----------------------VNYAFFNNITYTAPKVPTLMTVLSSGDQANNSE 363 (534)
T ss_dssp CCCCCCSCSEEEEEEE-EEEECTTS----------------------CEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGG
T ss_pred CCCCCCCCCeEEEEEE-EeeccCCc----------------------eeEEEECCCcccCCCCCceeeecccCcccCCCc
Confidence 00011111100 000 000 125667776541
Q ss_pred -------ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCC-------------------CCCCceEecEEEE
Q 008840 283 -------RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSA-------------------YLGKPVVTNDTVL 335 (551)
Q Consensus 283 -------~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~-------------------~l~~P~~~~~l~l 335 (551)
.+.++. ++++|.|.|.+.. ...+|| |||.|+|++.+++ +...|...|++.+
T Consensus 364 ~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HL-HGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V 441 (534)
T 1zpu_A 364 IYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHL-HGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYV 441 (534)
T ss_dssp GGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEE-TTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEE
T ss_pred ccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEe-cCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEe
Confidence 245665 8999999998743 455666 8999999998864 1235788999999
Q ss_pred ccCceEEEEEEcCCCCCceEEEecC
Q 008840 336 APAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 336 ~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.||+.+.|.++++++ | .+.++..
T Consensus 442 ~pgg~v~IrF~aDNP-G-~W~~HCH 464 (534)
T 1zpu_A 442 RPQSNFVIRFKADNP-G-VWFFHCH 464 (534)
T ss_dssp CTTCEEEEEEECCSC-E-EEEEEEC
T ss_pred CCCCEEEEEEEeCCC-e-eEEEEeC
Confidence 999999988888764 3 6777664
No 68
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.71 E-value=2.7e-07 Score=99.70 Aligned_cols=231 Identities=10% Similarity=0.054 Sum_probs=128.6
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCC
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPT 175 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~ 175 (551)
+-|.|+|++|+++++|+.|.-... ...+|++|....- ..||.+-.++. .-.|.||++
T Consensus 184 ~~~~~~v~~G~~~RlRliNa~~~~--------------------~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 184 ELSVIKVTKGKRYRFRLVSLSCNP--------------------NHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp CCCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCE
T ss_pred CcceEEEcCCCEEEEEEEecCCCe--------------------eEEEEECCCeEEEEEECCcccCceEeeeEEECCCcE
Confidence 457999999999999999986542 5788988875432 27887643322 124789999
Q ss_pred cceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecC
Q 008840 176 WTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNS 254 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~ 254 (551)
+ +.-+.+++.+|.||..+...... .....+..-+++..+.... ..|... ..+.. .+.+..+..-.....+.
T Consensus 244 ~---dvlv~~~~~~g~y~i~a~~~~~~-~~~~~~~~~ail~Y~~~~~---~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~ 315 (499)
T 3pxl_A 244 Y---SFVLDANQAVDNYWIRANPNFGN-VGFDGGINSAILRYDGAPA---VEPTTNQTTSVK-PLNEVDLHPLVSTPVPG 315 (499)
T ss_dssp E---EEEEECCSCSSEEEEEEEESSSS-CSCGGGTTEEEEEETTSCS---SCCCCCCCCCSS-BCCGGGCCBSSCCCCSS
T ss_pred E---EEEEECCCCCceEEEEEecccCc-cccCCCceEEEEEeCCCCC---CCCCCCCCCCCc-ccccccccccccccCCC
Confidence 8 88888887789999988642110 0111222223333322211 001100 00000 00010010000000000
Q ss_pred CC--CCCCCCCCCCCccCCceEEECCcccC-------------------------ceeecC-eEEEEEEEecCC--CceE
Q 008840 255 TG--NNPSIHPQWQPEYFGDVIVVNGKAWP-------------------------RMTVRR-RKYRFRIINASN--ARFF 304 (551)
Q Consensus 255 ~g--~~~~~~~~~~~~~~gd~~lVNG~~~P-------------------------~~~v~~-~~~RlRllNas~--~~~~ 304 (551)
.- ..++..-...-++.+..++|||+.+. .+.++. ++++|.|.|.++ ....
T Consensus 316 ~~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~H 395 (499)
T 3pxl_A 316 APSSGGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPH 395 (499)
T ss_dssp CSSTTCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSC
T ss_pred cccCCCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCc
Confidence 00 00000000000112346788997651 145555 899999985322 2234
Q ss_pred EEEEcCCceEEEEEcCCCCC---CCceEecEEEEcc---CceEEEEEEcCCCCCceEEEecC
Q 008840 305 RFFFTNGLRFIHVGSDSAYL---GKPVVTNDTVLAP---AEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 305 ~l~l~~g~~~~via~DG~~l---~~P~~~~~l~l~p---geR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.+|| |||.|+|++.+|... ..|...|++.+.+ |+.+.|-+.++++ | .+.++..
T Consensus 396 P~HL-HGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP-G-~W~~HCH 454 (499)
T 3pxl_A 396 PFHL-HGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP-G-PWFLHCH 454 (499)
T ss_dssp EEEE-TTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC-E-EEEEEES
T ss_pred ccee-cCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC-c-eEEEEeC
Confidence 5666 899999999888642 3588999999986 9999888877764 3 6666654
No 69
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.65 E-value=9.4e-08 Score=85.40 Aligned_cols=89 Identities=10% Similarity=0.071 Sum_probs=61.4
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCC-----------------CCCCCCCCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGID-----------------EPESDGYAK 162 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~-----------------~~~~DG~p~ 162 (551)
-++|+|++||+|+++|+|.-... ++++++|+... .-..++.+.
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~--------------------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~ 93 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQ--------------------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSN 93 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSC--------------------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTT
T ss_pred CCeEEECCCCEEEEEEEeCCCCC--------------------CeeEEEeccccccchhhhhhhhcccccccccCccccc
Confidence 57899999999999999974320 36777766421 000011111
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+.....+.||+++ ++.|.++ .+|+|+||||.++ |.. ||.|.|+|+
T Consensus 94 ~~~~t~~l~pGet~---~v~f~~~-~pG~y~f~C~~~~----H~~-GM~G~i~V~ 139 (139)
T 2aan_A 94 IIAESPLANGNETV---EVTFTAP-AAGTYLYICTVPG----HYP-LMQGKLVVN 139 (139)
T ss_dssp EEEECCCBCTTCEE---EEEEECC-SSEEEEEECCSTT----TTT-TSEEEEEEC
T ss_pred ccccccccCCCCEE---EEEEECC-CCeEEEEEcCCCC----hHH-cCEEEEEEC
Confidence 11222247899998 9999986 8999999999864 445 999999984
No 70
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.64 E-value=2.7e-08 Score=88.92 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=41.6
Q ss_pred CCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 489 e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
...|+||+.|.||++.+|.|.++ +|| |+||||+..|++ ||++.|+|.
T Consensus 92 ~~~~~~t~~l~pGet~~v~f~~~--------------~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 92 SNIIAESPLANGNETVEVTFTAP--------------AAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp TTEEEECCCBCTTCEEEEEEECC--------------SSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred ccccccccccCCCCEEEEEEECC--------------CCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 45689999999999999988775 567 999999999999 999999873
No 71
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=98.62 E-value=1.9e-06 Score=95.02 Aligned_cols=85 Identities=11% Similarity=0.069 Sum_probs=65.2
Q ss_pred eEEECCccc---CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCC------------------------CC
Q 008840 273 VIVVNGKAW---PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSA------------------------YL 324 (551)
Q Consensus 273 ~~lVNG~~~---P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~------------------------~l 324 (551)
.++|||+.+ +.+.++. ++++|+|+|.+.. ...+|| ||+.|+|++.+|. .+
T Consensus 460 ~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~~-~HPiHl-Hg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 537 (612)
T 2g23_A 460 TYRRTAATFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHI-HLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEE-SSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred EEEECCccCCCCCceEecCCCEEEEEEEeCCCC-CCCeEE-cCceEEEecccCcccccccccccCcccccccccccccCC
Confidence 588999987 4567776 8999999999733 456777 8999999987532 11
Q ss_pred --CCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 325 --GKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 325 --~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.++..+|++.|.||+++.|.++|+..+| .|.+...
T Consensus 538 ~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG-~w~~HCH 574 (612)
T 2g23_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCH 574 (612)
T ss_dssp CTTSSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEES
T ss_pred CcccccccCeEEECCCcEEEEEEEeCCCCc-cEEEEeC
Confidence 1223689999999999999999995555 7777754
No 72
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.61 E-value=6.5e-07 Score=96.22 Aligned_cols=86 Identities=12% Similarity=0.251 Sum_probs=68.1
Q ss_pred ceEEECCcccC----ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCC--ceEecEEEEccCceEEEE
Q 008840 272 DVIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGK--PVVTNDTVLAPAEIADVV 344 (551)
Q Consensus 272 d~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~--P~~~~~l~l~pgeR~dVl 344 (551)
+.++|||+.+. .+.++. +++||+|+|.+......+|| ||+.|+|++.||...+. +...|++.|. ||++.|+
T Consensus 378 ~~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~Hl-Hg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~ 455 (488)
T 3od3_A 378 HANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHI-HGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVL 455 (488)
T ss_dssp GCEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEE-TTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEE
T ss_pred ceeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEE-cCceEEEeccCCCccccccCCceeEEEeC-CCEEEEE
Confidence 35899999864 467776 89999999999655566777 89999999999987631 2358999999 9999999
Q ss_pred EEcCCCCC--ceEEEec
Q 008840 345 IDFSESTS--DVAILAN 359 (551)
Q Consensus 345 v~~~~~~g--~~~~L~~ 359 (551)
|.|+..++ +.|.+..
T Consensus 456 ~~f~~~~~~~G~~m~HC 472 (488)
T 3od3_A 456 VKFNHDAPKEHAYMAHC 472 (488)
T ss_dssp ECBCSCCCGGGCEEEEE
T ss_pred EEeccCCCCCCCEEEeC
Confidence 99987542 3566654
No 73
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=98.53 E-value=1.8e-06 Score=93.74 Aligned_cols=221 Identities=12% Similarity=0.019 Sum_probs=122.7
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCC-CCC-CCCCCCCC-cc--eecc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG-IDE-PESDGYAK-SW--FTAG 168 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~-~~~-~~~DG~p~-~~--~t~~ 168 (551)
+||+. .|+|.++.| ++|+|+.|.-... ...+|+.|. ... -..||.+- .+ +..-
T Consensus 235 iNG~~-~p~~~v~~~-~~RlRliNa~~~~--------------------~~~~~i~~~~~~~via~DG~~~~~P~~~~~l 292 (513)
T 2wsd_A 235 VNGKV-WPYLEVEPR-KYRFRVINASNTR--------------------TYNLSLDNGGDFIQIGSDGGLLPRSVKLNSF 292 (513)
T ss_dssp ETTEE-SCEEECCSS-EEEEEEEECCSSC--------------------CEEEEETTCCCEEEEEETTEEEEEEEEESEE
T ss_pred ECCcc-cceEEecCC-EEEEEEEccCCcc--------------------eEEEEECCCCeEEEEccCCCcccCceEeCeE
Confidence 46754 789999885 9999999986652 578888876 322 22788541 11 2223
Q ss_pred ccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccc-eEEEEEeCC--C-CCCCCCCCCCCcCc---eeE--EE
Q 008840 169 FEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGL-IGAYILRHP--D-VEAPLRLPSGDVFD---RPL--FV 239 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL-~G~~iV~dp--~-~~~~~~lP~~~~~e---~~l--vl 239 (551)
.|.||+++ +.-+.+++.+|. ||.-............+. ...+-.+.. . ..+...+|.. ..+ .++ .-
T Consensus 293 ~l~pgeR~---dvlv~~~~~~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~-l~~~~~~~~~~~~ 367 (513)
T 2wsd_A 293 SLAPAERY---DIIIDFTAYEGE-SIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKY-LASYPSVQHERIQ 367 (513)
T ss_dssp EECTTCEE---EEEEECGGGTTC-EEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSB-CSCCGGGCCCCEE
T ss_pred EECCeeeE---EEEEECCCCCCc-EEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCcc-ccCCCCcccCCCc
Confidence 57899988 777777766776 333221110000000001 122222211 1 0111122221 000 000 00
Q ss_pred EEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC---ceeecC-eEEEEEEEecCCCceEEEEEcCCceEE
Q 008840 240 FDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP---RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFI 315 (551)
Q Consensus 240 ~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P---~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~ 315 (551)
.++.+. +..... ......++|||+.+. .+.++. ++++|.|.|.+.. ...+|| ||+.|+
T Consensus 368 ~~~~~~----l~~~~~------------~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~-~HP~Hl-HG~~F~ 429 (513)
T 2wsd_A 368 NIRTLK----LAGTQD------------EYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHL-HLVSFR 429 (513)
T ss_dssp EEEEEE----EEEEEC------------TTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEE-SSCCEE
T ss_pred ceEEEE----EEeecC------------CCCCceEeECCccCCCcccEecCCCCEEEEEEEcCCCC-CcCEeE-eCceEE
Confidence 111110 000000 000125679999873 345655 8999999998743 455666 899999
Q ss_pred EEEcCCC---------------CC-----CCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 316 HVGSDSA---------------YL-----GKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 316 via~DG~---------------~l-----~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|++.+|. .. ..+...|++.|.||+++.|++.|.+.+| .+.+...
T Consensus 430 Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCH 493 (513)
T 2wsd_A 430 VLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCH 493 (513)
T ss_dssp EEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEES
T ss_pred EEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcC
Confidence 9998751 10 0234789999999999999999975555 6777654
No 74
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.51 E-value=1.7e-07 Score=78.22 Aligned_cols=82 Identities=15% Similarity=0.132 Sum_probs=56.9
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+|+ |+|.-.. ++++|+|+...+...|.. ..+.....+.||+++
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~---------------------~H~~~~~~~~~p~~~~~~-~~~~~~~~~~pG~~~--- 69 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGF---------------------PHNIVFDEDAIPSGVNAD-AISRDDYLNAPGETY--- 69 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEECGGGSCTTCCHH-HHCEEEEECSTTCEE---
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------ceEEEEeCCCCCCccccc-cccccceecCCCCEE---
Confidence 4689999999865 5787543 799999986543322210 001112247899987
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|. .+|+|+||||.| ..+||.|.|+|+
T Consensus 70 ~~tf~---~~G~y~y~C~~H------~~~gM~G~i~V~ 98 (98)
T 2plt_A 70 SVKLT---AAGEYGYYCEPH------QGAGMVGKIIVQ 98 (98)
T ss_dssp EEECC---SCEEEEEECGGG------GGGTCEEEEEEC
T ss_pred EEEeC---CCeEEEEEcCCc------cccCCeEEEEEC
Confidence 77663 799999999953 457999999984
No 75
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.50 E-value=5.8e-07 Score=90.82 Aligned_cols=93 Identities=22% Similarity=0.221 Sum_probs=68.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCCc-----ceeccccCCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAKS-----WFTAGFEEKG 173 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~~-----~~t~~~i~pG 173 (551)
-|.|+++.||+|++++.|.... .+.+|+||-...-. .+|.... ......+.||
T Consensus 189 ~p~l~v~~Ge~Vr~~liN~~~~---------------------~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PG 247 (299)
T 3t9w_A 189 APTFEANLGERVEWIAIGHGSN---------------------FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPG 247 (299)
T ss_dssp CCEEEEETTCEEEEEEEEESSC---------------------CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTT
T ss_pred cccceecCCCEEEEEEEecccc---------------------ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCc
Confidence 5899999999999999998665 68999999753211 2222110 0111247899
Q ss_pred CCcceeeEEEEcCc--cCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 174 PTWTNETYHYHNMQ--QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 174 ~~~~~~~y~f~~~~--~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+++ ++.+.+.+ .+|+|+||||.. .+..+||.|.|.|++.+
T Consensus 248 e~~---~~~via~~~dnPG~w~~HCHi~----~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 248 VSF---GFQVIAGEGVGPGMWMYHCHVQ----NHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp CEE---EEEEETTTTTCSEEEEEEECSH----HHHHTTCEEEEEEECTT
T ss_pred eeE---EEEEEEeeCCCCeeEEEEcCCH----HHHhcCCeEEEEEECCC
Confidence 988 77776543 589999999973 46789999999999654
No 76
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.48 E-value=1.1e-06 Score=95.82 Aligned_cols=221 Identities=12% Similarity=0.050 Sum_probs=120.9
Q ss_pred CCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCC------CC--CCCCCCCC-Ccc-
Q 008840 95 TASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG------ID--EPESDGYA-KSW- 164 (551)
Q Consensus 95 ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~------~~--~~~~DG~p-~~~- 164 (551)
||+ +.|+|.|+.| ++|+|+.|.-... ...++++|. |. --..||.. ..+
T Consensus 207 NG~-~~p~~~v~~~-~~RlRliNa~~~~--------------------~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~ 264 (534)
T 3abg_A 207 NGQ-PWPFKNVEPR-KYRFRFLDAAVSR--------------------SFGLYFADTDAIDTRLPFKVIASDSGLLEHPA 264 (534)
T ss_dssp TTE-ESCBCBCCSS-EEEEEEEECCSSC--------------------CEEEEECCSSSTTCCCCEEEEEETTEEEEEEE
T ss_pred CCc-cCceEEecCc-EEEEEEEecCCcc--------------------eEEEEEecccCcCCCccEEEEEeCCCcccCce
Confidence 564 5789999985 9999999986652 568888772 11 11278862 111
Q ss_pred -eeccccCCCCCcceeeEEEEcCccCc-eeEEeccCCC---chhhhhhccceEEEEEeCCC---CCCCCCCCCCCcCcee
Q 008840 165 -FTAGFEEKGPTWTNETYHYHNMQQPG-NTWYHDHTMG---LTRVNLLAGLIGAYILRHPD---VEAPLRLPSGDVFDRP 236 (551)
Q Consensus 165 -~t~~~i~pG~~~~~~~y~f~~~~~~G-t~wYH~H~~g---~t~~qv~~GL~G~~iV~dp~---~~~~~~lP~~~~~e~~ 236 (551)
+..-.|.||+++ +.-+..++.+| +||....... .....-+....+.+-++... ..+...+|.. -...+
T Consensus 265 ~~~~l~l~pgeR~---dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~-L~~~~ 340 (534)
T 3abg_A 265 DTSLLYISMAERY---EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPAN-LRDVP 340 (534)
T ss_dssp EESCEEECTTCEE---EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCC-CCCCS
T ss_pred EeceEEECCccEE---EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccc-cccCC
Confidence 222347899988 77777766677 6887653211 00000000111222222111 0001111210 00000
Q ss_pred EEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC------ceeecC-eEEEEEEEecCCCceEEEEEc
Q 008840 237 LFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP------RMTVRR-RKYRFRIINASNARFFRFFFT 309 (551)
Q Consensus 237 lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P------~~~v~~-~~~RlRllNas~~~~~~l~l~ 309 (551)
. .+-....+-.+.+ +..+..++|||+.+. .+.++. ++++|.|.|.+......+||
T Consensus 341 ~--p~~~~~~~~~~~~---------------~~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HL- 402 (534)
T 3abg_A 341 F--PSPTTNTPRQFRF---------------GRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHI- 402 (534)
T ss_dssp C--CCCCCCCCEEEEC---------------SCCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEE-
T ss_pred C--CCCccccceEEEE---------------eccCceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEE-
Confidence 0 0000000000000 011235789999863 234665 79999999987533334455
Q ss_pred CCceEEEEEc-CCCC--CCCc---eEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 310 NGLRFIHVGS-DSAY--LGKP---VVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 310 ~g~~~~via~-DG~~--l~~P---~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
||+.|+|++. +|+. -..+ ...|++.+.||+++.|.+.+.+.+| .+.+...
T Consensus 403 HG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnpG-~w~~HCH 458 (534)
T 3abg_A 403 HLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPG-VYMFHCH 458 (534)
T ss_dssp SSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCCE-EEEEEES
T ss_pred CCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCCc-cEEEecC
Confidence 8999999998 6641 1112 4589999999999999998665555 6777764
No 77
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.46 E-value=2.6e-07 Score=77.64 Aligned_cols=74 Identities=15% Similarity=0.019 Sum_probs=57.8
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-.+|++++||+|++.++|.-.. ++++...+... . ..+.||++.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~---------------------~H~~~~~~~~~------------~-~~~~pg~~~--- 69 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKS---------------------EHTFTIKKLGI------------D-VVVESGKEK--- 69 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSS---------------------CEEEEEGGGTE------------E-EEECTTCEE---
T ss_pred CCEEEECCCCEEEEEEEcCCCc---------------------eEEEEEecCCc------------c-eeecCCcce---
Confidence 4589999999999999997544 56666554321 1 136789888
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|+.+ .+|+|.|+|..| ...||.|.|+|+
T Consensus 70 ~~~~t~~-~~G~Y~y~C~~H------~~~gM~G~i~Ve 100 (100)
T 4hci_A 70 NITVKPK-SAGTYELICRYH------LLKGMEGKVIVK 100 (100)
T ss_dssp EEEECCC-SCEEEEEECTTT------GGGTCEEEEEEC
T ss_pred eEEEecc-cCceEEEECccc------cCCCCEEEEEEC
Confidence 8999985 999999999865 457999999996
No 78
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.39 E-value=5.2e-07 Score=75.25 Aligned_cols=80 Identities=16% Similarity=0.272 Sum_probs=55.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCCcceeccccCCCCCcce
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~~~~t~~~i~pG~~~~~ 178 (551)
-+.|++++||+|+ |.|.-.. ++++|+++...+.. .++.+ .....+.||+++
T Consensus 18 P~~i~v~~G~~V~--~~n~~~~---------------------~H~~~~~~~~~pg~~~~~~~---~~~~~~~pG~~~-- 69 (98)
T 1pcs_A 18 PSTVTIKAGEEVK--WVNNKLS---------------------PHNIVFDADGVPADTAAKLS---HKGLLFAAGESF-- 69 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEECCSSSCHHHHHHHC---EEEEECSTTCEE--
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CcEEEEeCCCCCcccccccc---ccccccCCCCEE--
Confidence 4689999999865 5576433 69999987543200 00110 122347899988
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|+|||+.| ..+||.|.|+|+
T Consensus 70 -~~tf--~-~~G~y~~~C~~H------~~~gM~G~i~V~ 98 (98)
T 1pcs_A 70 -TSTF--T-EPGTYTYYCEPH------RGAGMVGKVVVE 98 (98)
T ss_dssp -EEEC--C-SCEEEEEECGGG------TTTTCEEEEEEC
T ss_pred -EEEc--C-CCeEEEEEcCCc------cccCCeEEEEEC
Confidence 7777 3 799999999954 458999999985
No 79
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.38 E-value=1.6e-06 Score=77.46 Aligned_cols=88 Identities=17% Similarity=0.208 Sum_probs=60.7
Q ss_pred CcEEEEECCCEEEEEEEe--CCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCC------------C------CCCCCC
Q 008840 100 GPTIEALHGIDTYVTWQN--HLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGI------------D------EPESDG 159 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N--~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~------------~------~~~~DG 159 (551)
-+.|+|++||+|+++|+| .... +++++++... . -+..|
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~---------------------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 89 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGV---------------------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPD- 89 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCC---------------------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTT-
T ss_pred CCeEEECCCCEEEEEEECCCCCCC---------------------ceeEEEeccCcchhhhhhhhhhhcccccccCccc-
Confidence 479999999999999999 5443 5777776321 0 00001
Q ss_pred CCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 160 YAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 160 ~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+..+.....+.||++. ++.|..+ .+|+|||||+..+ |...||.|.|+|.
T Consensus 90 ~~~~~~~t~~l~pG~~~---~~~~~~~-~~G~y~f~C~~~~----H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 90 TPNALAWTAMLNAGESG---SVTFRTP-APGTYLYICTFPG----HYLAGMKGTLTVT 139 (140)
T ss_dssp CTTEEEECCCBCTTEEE---EEEEECC-SSEEEEEECCSTT----TTTTTCEEEEEEE
T ss_pred cccccccceeeCCCcee---EEEEEeC-CCeeEEEEeCCcC----HhhcCCEEEEEEc
Confidence 11111111247899988 8889985 8999999999754 4568999999997
No 80
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.37 E-value=5.8e-07 Score=74.82 Aligned_cols=80 Identities=13% Similarity=0.062 Sum_probs=53.4
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+| +|.|.-.. +++++.++...+ +|.+........+.||+++
T Consensus 18 P~~i~v~~G~~V--~~~n~~~~---------------------~H~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~--- 68 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMNKVG---------------------PHNVIFDKVPAG---ESAPALSNTKLAIAPGSFY--- 68 (97)
T ss_dssp SSEEEECTTCEE--EEEECSSC---------------------CCCBEEEECCTT---SCHHHHCBCCCCCSCSCCE---
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------CeEEEEeCCCCc---cccccccccceecCCCCEE---
Confidence 358999999985 56686433 577777654331 1211100112247799988
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| ..+|+|+|||+.|. .+||.|.|+|+
T Consensus 69 ~~tf---~~~G~y~y~C~~H~------~~gM~G~i~V~ 97 (97)
T 1b3i_A 69 SVTL---GTPGTYSFYCTPHR------GAGMVGTITVE 97 (97)
T ss_dssp EEEC---CSCSEEEEECSSTT------TTTCEEEEEEC
T ss_pred EEEe---CCCeEEEEEccChh------hcCCEEEEEEC
Confidence 7777 38999999999652 47999999984
No 81
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.37 E-value=1.1e-06 Score=71.93 Aligned_cols=74 Identities=23% Similarity=0.286 Sum_probs=53.3
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+|+ |.|.-.. ++++|.++.. +. ......+.||+++
T Consensus 18 P~~i~v~~Gd~V~--~~n~~~~---------------------~H~v~~~~~~--------~~-~~~~~~~~~g~~~--- 62 (91)
T 1bxv_A 18 PSTIEIQAGDTVQ--WVNNKLA---------------------PHNVVVEGQP--------EL-SHKDLAFSPGETF--- 62 (91)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEETTCG--------GG-CEEEEECSTTCEE---
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CcEEEEeCCC--------cc-CcccceeCCCCEE---
Confidence 5689999999976 4576433 6899988721 10 0122247899887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| ..+|+|||||+.| ..+||.|.|+|+
T Consensus 63 ~~~f---~~~G~y~~~C~~H------~~~gM~g~i~V~ 91 (91)
T 1bxv_A 63 EATF---SEPGTYTYYCEPH------RGAGMVGKIVVQ 91 (91)
T ss_dssp EEEC---CSCEEEEEECTTT------GGGTCEEEEEEC
T ss_pred EEEe---CCCEEEEEEeCCC------ccCCCEEEEEEC
Confidence 7776 3899999999965 346999999984
No 82
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=98.36 E-value=1.9e-06 Score=86.44 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=73.6
Q ss_pred ccEEEeecCCCCCCCCC---cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCC
Q 008840 84 TPVFAFGTSSLTASVPG---PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGY 160 (551)
Q Consensus 84 ~~~~~y~~~~~ng~~PG---Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~ 160 (551)
...|+.| |..-+ +.|.+++|+++++++.|..... ..+.+|+||....-..+|.
T Consensus 180 ~~~~~iN-----G~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~-------------------~~H~fHlhG~~f~v~~~g~ 235 (288)
T 3gdc_A 180 NEFYSVN-----GLPFHFMDFPVKVKQHELVRIHLINVLEYD-------------------PINSFHIHGNFFHYYPTGT 235 (288)
T ss_dssp CSEEEET-----TSTTHHHHSCEEEETTCCEEEEEEECCCSS-------------------SEEEEEETTCCEEEEETTC
T ss_pred cceEEEC-----cccccccCcccccCCCCEEEEEEEeCCCCC-------------------cceeEEEcCCEEEEEcCCC
Confidence 4678876 65432 4799999999999999985420 1489999998643222332
Q ss_pred C---CcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 161 A---KSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 161 p---~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
. ..+...-.+.||+++ +..|.++ .+|+|.||||.. .+..+||.|.+.|.
T Consensus 236 ~~~~~~~~Dtv~v~pg~~~---~v~~~~~-~pG~~~~hCH~~----~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 236 MLTPSEYTDTISQVQGQRG---ILELRFP-YPGKFMFHAHKT----EFAELGWMGFFEVS 287 (288)
T ss_dssp CSSCSEEESEEEEETTCEE---EEEECCC-SCEEEEEECSSH----HHHTTTCEEEEEEE
T ss_pred ccCCCceeeEEEeCCCceE---EEEEECC-CCEEEEEEecCh----HHHhcCCCEEEEEe
Confidence 1 111111246899988 8999986 899999999974 36789999999986
No 83
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.35 E-value=5.4e-05 Score=82.95 Aligned_cols=227 Identities=9% Similarity=0.013 Sum_probs=125.1
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCcceec--cccCCCCCc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFTA--GFEEKGPTW 176 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t~--~~i~pG~~~ 176 (551)
-++|++++|+++++|+.|.-... ...+|++|....- ..||.+-.++.. -.|.||+++
T Consensus 252 ~~~~~v~~G~~yRlRlINa~~~~--------------------~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRy 311 (580)
T 3sqr_A 252 KFELTFVEGTKYRLRLINVGIDS--------------------HFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRY 311 (580)
T ss_dssp CCEEECCTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEE
T ss_pred ceeEEEcCCCEEEEEEEeccCCc--------------------eeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEE
Confidence 48999999999999999986652 5788888865332 278876332221 247899998
Q ss_pred ceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCC-CceEecCC
Q 008840 177 TNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTN-GSIYMNST 255 (551)
Q Consensus 177 ~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~-g~~~~~~~ 255 (551)
+.-+.+++.+|.||............-..+..=+|+..+.. .. ..|.....+.. +..++.+ ..+ .+..
T Consensus 312 ---dVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~-~~--~~P~~~~~~~~----~~~~~~~~~~L-~P~~ 380 (580)
T 3sqr_A 312 ---DVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSS-SI--ANPTSVGTTPR----GTCEDEPVASL-VPHL 380 (580)
T ss_dssp ---EEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTT-CC--CCCCCCCCCCC----CCSCCSCGGGC-CBSS
T ss_pred ---EEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCC-CC--CCCCCCCCCcc----chhhccccccc-ccCC
Confidence 88888888899999998764311000011112233333221 10 11110000000 0000000 000 0000
Q ss_pred CCCCCCCCCC----CCcc-CCceEEECCccc------Cc-----------------eeec-----CeEEEEEEEecCC-C
Q 008840 256 GNNPSIHPQW----QPEY-FGDVIVVNGKAW------PR-----------------MTVR-----RRKYRFRIINASN-A 301 (551)
Q Consensus 256 g~~~~~~~~~----~~~~-~gd~~lVNG~~~------P~-----------------~~v~-----~~~~RlRllNas~-~ 301 (551)
.......... .-+. ..-.+.|||..+ |. +.+. .+++.|.|-|.+. .
T Consensus 381 ~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp CCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 0000000000 0000 011345666543 11 2232 3799999999871 2
Q ss_pred ceEEEEEcCCceEEEEEcCCCCC-----------CCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 302 RFFRFFFTNGLRFIHVGSDSAYL-----------GKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 302 ~~~~l~l~~g~~~~via~DG~~l-----------~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
....+|| |||.|+||+.+.+.. ..|...|++.+.|++.+.|-++++++ | .+.++..
T Consensus 461 ~~HP~HL-HGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNP-G-~W~~HCH 527 (580)
T 3sqr_A 461 IWHPIHL-HGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP-G-SWLLHCH 527 (580)
T ss_dssp CCEEEEE-SSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSC-E-EEEEEEC
T ss_pred cceeeEe-cCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCC-e-eeEEEEC
Confidence 3456666 899999999865433 24788999999999999999988865 3 6666654
No 84
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.31 E-value=1.7e-06 Score=76.48 Aligned_cols=74 Identities=22% Similarity=0.321 Sum_probs=52.5
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-++|++++||+|+ |.|.... ++++++.... +|.. .+....+.||+++
T Consensus 59 P~~i~V~~GdtV~--~~N~d~~---------------------~H~v~~~~~~-----~g~~--~~~s~~l~pG~t~--- 105 (132)
T 3c75_A 59 TPEVTIKAGETVY--WVNGEVM---------------------PHNVAFKKGI-----VGED--AFRGEMMTKDQAY--- 105 (132)
T ss_dssp SSEEEECTTCEEE--EEECSSS---------------------CBCCEECTTT-----SSSS--CEECCCBCTTEEE---
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------ceEEEEeCCC-----CCcc--cccccccCCCCEE---
Confidence 3699999999875 5587543 5666664322 2221 2444457899988
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.| + .+|+|+|||-.| .||.|.|+|+
T Consensus 106 ~~tF--~-~~G~y~y~C~~H--------~gM~G~I~V~ 132 (132)
T 3c75_A 106 AITF--N-EAGSYDYFCTPH--------PFMRGKVIVE 132 (132)
T ss_dssp EEEE--C-SCEEEEEECSSC--------TTCEEEEEEC
T ss_pred EEEc--C-CCEEEEEEeCCC--------cCCEEEEEEC
Confidence 7777 3 799999999876 2999999985
No 85
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.30 E-value=1.4e-06 Score=76.11 Aligned_cols=77 Identities=8% Similarity=-0.063 Sum_probs=53.0
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-..|+|++||+|+ |.|.- . ++++..+....+ +|... + .+.||++|
T Consensus 21 P~~i~V~~GDTV~--f~n~~-~---------------------~Hnv~~~~~~~p---~g~~~--~---~~~pg~t~--- 65 (124)
T 3ef4_A 21 PGFVKVEAGDTVK--FVPTD-K---------------------SHNAESVREVWP---EGVAP--V---KGGFSKEV--- 65 (124)
T ss_dssp SSEEEECTTCEEE--EECSS-S---------------------SCCCEECTTTSC---TTSCC--C---BCCTTCCE---
T ss_pred CCEEEECCCCEEE--EEECC-C---------------------CccEEEeCCcCC---CCccc--c---ccCCCCEE---
Confidence 4699999999865 55543 2 566666633222 23211 2 24688887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|.| + .+|+|||||-.| ..+||.|.|+|.+|.
T Consensus 66 s~TF--~-~~G~y~Y~C~~H------~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 66 VFNA--E-KEGLYVLKCAPH------YGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEEC--C-SSEEEEEECTTT------GGGTCEEEEEESSCT
T ss_pred EEEe--C-CCeEEEEEcCCC------CcCCCEEEEEECCCC
Confidence 7777 3 799999999754 468999999999754
No 86
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.29 E-value=1.7e-06 Score=75.90 Aligned_cols=77 Identities=19% Similarity=0.223 Sum_probs=51.5
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|+|++||+|++.+.|. ++++..+....+ +|... + .+.||++|
T Consensus 22 P~~i~V~~GDtVtf~n~~~------------------------~H~v~~~~~~~P---~g~~~--f---~s~pGet~--- 66 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK------------------------GHNSALMKGGAP---EGAET--W---KGKINEEI--- 66 (127)
T ss_dssp SSEEEECTTCEEEEECSSS------------------------SCCCEECTTCSC---TTCCC--C---BCCTTCCC---
T ss_pred CCEEEECCCCEEEEEECCC------------------------CceEEEccCcCC---CCccc--e---ecCCCCEE---
Confidence 5799999999966555442 244444322111 22211 2 24689988
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|.| ..+|+|||||-.| ..+||.|.|+|.++.
T Consensus 67 s~TF---~~pG~y~y~C~~H------~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 67 TVTL---SKPGVYMYQCAPH------VGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEEC---CSCEEEEEECTTT------GGGTCEEEEEESSCT
T ss_pred EEEe---CCCeEEEEEeCCC------CcCCcEEEEEECcCC
Confidence 7777 3899999999965 458999999999753
No 87
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.24 E-value=1.8e-06 Score=72.50 Aligned_cols=80 Identities=13% Similarity=0.061 Sum_probs=52.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCC-------CCCcceeccccCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDG-------YAKSWFTAGFEEK 172 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG-------~p~~~~t~~~i~p 172 (551)
-++|++++||+|+ |.|.-.. +++++++.- ...++ .+........+.|
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~---------------------~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p 69 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGET---------------------GHNIVFDIP---AGAPGTVASELKAASMDENDLLSED 69 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSS---------------------CBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTT
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CeEEEEeCc---ccccccccchhhcccccccceecCC
Confidence 5789999999876 5686433 577777621 11110 0110011223678
Q ss_pred CCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 173 GPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 173 G~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
|+++ ++.| ..+|+|+|||+.| ..+||.|.|+|+
T Consensus 70 G~~~---~~tf---~~~G~y~y~C~~H------~~~gM~G~i~V~ 102 (102)
T 1kdj_A 70 EPSF---KAKV---STPGTYTFYCTPH------KSANMKGTLTVK 102 (102)
T ss_dssp BCEE---EECC---CSCEEEEEECSTT------GGGTCEEEEEEC
T ss_pred CCEE---EEEe---CCCeEEEEEeCCC------cccCCeEEEEEC
Confidence 9887 7777 3899999999954 457999999985
No 88
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.23 E-value=3.2e-06 Score=73.76 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=51.3
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-..|+|++||+|++.+.| . ++++..+....+ +|... + .+.||++|
T Consensus 20 P~~i~V~~GdtV~f~~~~---~---------------------~H~v~~~~~~~P---~g~~~--f---~~~pg~t~--- 64 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTD---K---------------------SHNVEAIKEILP---EGVES--F---KSKINESY--- 64 (123)
T ss_dssp SSEEEECTTEEEEEEESS---T---------------------TCCCEECTTSSC---TTCCC--C---BCCTTCCE---
T ss_pred CCEEEECCCCEEEEEECC---C---------------------CceEEEcCCcCC---CCccc--e---ecCCCCEE---
Confidence 469999999997777665 2 344444422111 23211 2 24588887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
+|.| + .+|+|||+|-.| ..+||.|.|+|.+
T Consensus 65 s~TF--~-~pG~y~y~C~~H------~~~GM~G~I~V~~ 94 (123)
T 3erx_A 65 TLTV--T-EPGLYGVKCTPH------FGMGMVGLVQVGD 94 (123)
T ss_dssp EEEE--C-SCEEEEEECGGG------TTTTCEEEEEESS
T ss_pred EEEe--C-CCeEEEEEeCCC------CcCCcEEEEEECC
Confidence 7777 3 799999999964 4689999999996
No 89
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.18 E-value=6e-06 Score=68.85 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=54.0
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC----cceeccccCCCCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK----SWFTAGFEEKGPT 175 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~----~~~t~~~i~pG~~ 175 (551)
-..|++++||+| +|+|.-.. ++++|+++...+. |... .......+.||++
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~---------------------~H~~~~~~~~~p~---g~~~~~~~~~~~~~~~~~G~~ 69 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNNAGF---------------------PHNDLFDKKEVPA---GVDVTKISMPEEDLLNAPGEE 69 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSC---------------------CBCCEECTTSSCT---TCCHHHHSCCTTCCBCSTTCE
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------cceEEEeCCCCcc---ccccccccccccceeeCCCCE
Confidence 468999999975 56787543 6888888754321 2110 0000113678988
Q ss_pred cceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 176 WTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+ ++.|. .+|+|+|||+.| ..+||.|.|+|+
T Consensus 70 ~---~~~f~---~~G~y~~~C~~H------~~~gM~G~i~V~ 99 (99)
T 1byp_A 70 Y---SVTLT---EKGTYKFYCAPH------AGAGMVGKVTVN 99 (99)
T ss_dssp E---EEEEC---SCEEEEEECGGG------TTTTCEEEEEEC
T ss_pred E---EEEeC---CCcEEEEEcCCc------cccCCEEEEEEC
Confidence 7 77773 799999999954 357999999984
No 90
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.15 E-value=7.3e-06 Score=68.37 Aligned_cols=83 Identities=13% Similarity=0.098 Sum_probs=52.9
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCC-CCcceeccccCCCCCcce
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGY-AKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~-p~~~~t~~~i~pG~~~~~ 178 (551)
-+.|++++||+| +|+|.-.. ++++++++...+...+.. .........+.||+++
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~---------------------~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~-- 70 (99)
T 1plc_A 16 PSEFSISPGEKI--VFKNNAGF---------------------PHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETF-- 70 (99)
T ss_dssp SSEEEECTTCEE--EEEECSSC---------------------CBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEE--
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------ceEEEEeCCCCcccccccccccccCccccCCCCEE--
Confidence 469999999976 55787443 577777764332111100 0000000136789877
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|+|||+.| ..+||.|.|+|+
T Consensus 71 -~~tf--~-~~G~y~~~C~~H------~~~gM~G~i~V~ 99 (99)
T 1plc_A 71 -EVAL--S-NKGEYSFYCSPH------QGAGMVGKVTVN 99 (99)
T ss_dssp -EEEC--C-SCEEEEEECGGG------TTTTCEEEEEEC
T ss_pred -EEEE--C-CCceEEEEcCCC------cccCCEEEEEEC
Confidence 7766 3 899999999954 357999999984
No 91
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.90 E-value=4.6e-05 Score=63.40 Aligned_cols=80 Identities=15% Similarity=0.076 Sum_probs=53.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC--cceeccccCCCCCcc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK--SWFTAGFEEKGPTWT 177 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~--~~~t~~~i~pG~~~~ 177 (551)
-++|++++||+|+ |.|.-.. ++++.+.....+ +|.-. .......+.||+++
T Consensus 17 P~~i~v~~GdtV~--~~n~~~~---------------------~H~v~~~~~~~p---~g~~~~~~~~~~~~~~~g~~~- 69 (98)
T 1iuz_A 17 PSKISVAAGEAIE--FVNNAGF---------------------PHNIVFDEDAVP---AGVDADAISYDDYLNSKGETV- 69 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEECTTSSC---TTCCHHHHCEEEEECSTTCEE-
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CEEEEEeCCCCc---cccccccccccccccCCCCEE-
Confidence 5699999999855 5676433 688877753222 12110 00111246789987
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|+|+|-.| ..+||.|.|+|+
T Consensus 70 --~~tf--~-~~G~y~y~C~~H------~~~gM~G~I~V~ 98 (98)
T 1iuz_A 70 --VRKL--S-TPGVYGVYCEPH------AGAGMKMTITVQ 98 (98)
T ss_dssp --EEEC--C-SCEEEEEECTTT------GGGTCEEEEEEC
T ss_pred --EEEc--C-CCEEEEEEchhh------ccCCCEEEEEEC
Confidence 7777 3 899999999875 347999999985
No 92
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=97.83 E-value=5e-05 Score=66.14 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=29.8
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
..||+++ +|.| + .+|+|||+|-.| ..+||.|.|+|.+
T Consensus 58 ~~pG~t~---~~tF--~-~~G~y~y~C~~H------~~~gM~G~I~V~~ 94 (123)
T 1paz_A 58 SKINENY---VLTV--T-QPGAYLVKCTPH------YAMGMIALIAVGD 94 (123)
T ss_dssp CCTTCCE---EEEC--C-SCEEEEEECTTT------GGGTCEEEEEESS
T ss_pred cCCCCEE---EEEe--C-CCEEEEEEeCCc------ccCCCEEEEEEcC
Confidence 3588877 7777 3 799999999854 4579999999986
No 93
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=97.80 E-value=1.1e-05 Score=67.93 Aligned_cols=43 Identities=26% Similarity=0.418 Sum_probs=35.0
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+|++.+.||++.++ +|..+ +.+| |.|||| .|.+.||++.|.|.
T Consensus 61 ~~~~~i~pG~~~~~--~f~~~-----------~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 61 HSQLMFSPGESYEI--TFSSD-----------FPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECSTTCEEEE--EECTT-----------SCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ccccccCCCCeEEE--EEecC-----------CCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 58899999999988 55310 1567 999999 79999999999885
No 94
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.80 E-value=7e-05 Score=63.34 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=50.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-..|++++||+|+ |.|.-.. ++++.+..... |. ..+....+.||+++
T Consensus 33 P~~i~V~~G~tV~--~~N~d~~---------------------~H~v~~~~~~~-----~~--~~~~s~~l~~g~~~--- 79 (106)
T 1id2_A 33 TPEVTIKAGETVY--WVNGEVM---------------------PHNVAFKKGIV-----GE--DAFRGEMMTKDQAY--- 79 (106)
T ss_dssp SSEEEECTTCEEE--EEECSSS---------------------CBCCEECTTTS-----SS--SCEECCCBCTTEEE---
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------cEEEEEeCCCC-----Cc--ccccccccCCCCEE---
Confidence 3699999999875 5576433 45555443221 11 11333347789887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|+|+|-.| .||.|.|+|+
T Consensus 80 ~~tf--~-~~G~y~~~C~~H--------~~M~G~I~V~ 106 (106)
T 1id2_A 80 AITF--N-EAGSYDYFCTPH--------PFMRGKVIVE 106 (106)
T ss_dssp EEEE--C-SCEEEEEECSSC--------TTCEEEEEEC
T ss_pred EEEe--C-CCEEEEEEeCCC--------CCCEEEEEEC
Confidence 7777 3 799999999886 2999999985
No 95
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=97.77 E-value=5.6e-05 Score=65.81 Aligned_cols=37 Identities=8% Similarity=0.178 Sum_probs=30.0
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
+.||+++ +|.| + .+|+|+|+|..| ..+||.|.|+|.+
T Consensus 58 ~~pG~t~---~~tF--~-~~G~y~y~C~~H------~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEA---VVKF--D-KEGVYGFKCAPH------YMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCE---EEEC--C-SCEEEEEECSTT------TTTTCEEEEEESS
T ss_pred cCCCCEE---EEEe--C-CCeEEEEEeCCc------cccCCEEEEEEcC
Confidence 4588887 7777 3 799999999865 3479999999985
No 96
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.72 E-value=5.5e-05 Score=66.40 Aligned_cols=42 Identities=12% Similarity=0.092 Sum_probs=33.4
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.+.||+++ ++.|.++ ..+|+|||.|-..|. +.||.|.|+|++
T Consensus 86 ~l~pGet~---svtf~~~~~~~~G~Y~f~C~~pgH-----~~~M~G~i~V~~ 129 (129)
T 1cuo_A 86 IIGGGEKT---SVKFKVSALSKDEAYTYFCSYPGH-----FSMMRGTLKLEE 129 (129)
T ss_dssp CBCTTCEE---EEEEEGGGCCTTSCEEEECCSTTC-----TTTSEEEEEEEC
T ss_pred EECCCCEE---EEEEeccccCCCceEEEEeCCCCc-----hHcCEEEEEEeC
Confidence 47899998 8889874 379999999976542 238999999973
No 97
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=97.72 E-value=2.1e-05 Score=65.24 Aligned_cols=40 Identities=23% Similarity=0.492 Sum_probs=35.3
Q ss_pred cCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 492 WKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 492 wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
|+|++.+.||++.++ .|+ .|| |.|||| .|++.||++.|.|
T Consensus 57 ~~~~~~~~pG~~~~~--tf~--------------~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 57 SRDDYLNAPGETYSV--KLT--------------AAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CEEEEECSTTCEEEE--ECC--------------SCEEEEEECG--GGGGGTCEEEEEE
T ss_pred cccceecCCCCEEEE--EeC--------------CCeEEEEEcC--CccccCCeEEEEE
Confidence 678999999999888 666 457 999999 7999999999987
No 98
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.69 E-value=4e-05 Score=70.18 Aligned_cols=42 Identities=14% Similarity=0.021 Sum_probs=33.1
Q ss_pred ccCCCCCcceeeEEEEcC-ccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM-QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~-~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.|.||+++ ++.|..+ -.+|+|||+|-..|. +.||.|-|+|.+
T Consensus 125 ~l~pGet~---svtf~~~~lkpG~Y~f~Ct~PgH-----~~gM~G~i~V~~ 167 (167)
T 3ay2_A 125 LIGGGEES---SLTLDPAKLADGDYKFACTFPGH-----GALMNGKVTLVD 167 (167)
T ss_dssp CBCTTCEE---EEEECGGGGTTSCEEEECCSTTG-----GGTSEEEEEEEC
T ss_pred eeCCCCEE---EEEEecCCCCCcEEEEEcCCCCc-----hhcCEEEEEEeC
Confidence 47899988 8888763 279999999987552 238999999973
No 99
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=97.65 E-value=0.0034 Score=69.20 Aligned_cols=86 Identities=9% Similarity=0.069 Sum_probs=63.8
Q ss_pred ceEEECCcccC---ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCC-----------------------
Q 008840 272 DVIVVNGKAWP---RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYL----------------------- 324 (551)
Q Consensus 272 d~~lVNG~~~P---~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l----------------------- 324 (551)
..+.+||+.+. .+.++. ++++|.|.|.+.. ...+|| ||+.|+||+.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HL-HG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHI-HLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEE-SSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeE-CCCcEEEEeecCCcCccccccccccccccccccccccC
Confidence 35778888764 355665 8999999999854 345666 899999998766421
Q ss_pred ---CCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 325 ---GKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 325 ---~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.++-..|++.+.+|+.+.|.++|.+.+| .+.+...
T Consensus 537 ~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG-~w~~HCH 574 (612)
T 3gyr_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCH 574 (612)
T ss_dssp CCTTCSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEES
T ss_pred cccccCCCCcEEEECCCCEEEEEEEeCCCCc-ceEEcCC
Confidence 1223479999999999999999877765 6776654
No 100
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=97.56 E-value=3.1e-05 Score=68.88 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=42.7
Q ss_pred CCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 489 e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
...|++|+.|.||++.++.+.|+ .|| |.|||++..|...||.+.|.|.
T Consensus 91 ~~~~~~t~~l~pG~~~~~~~~~~--------------~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 91 PNALAWTAMLNAGESGSVTFRTP--------------APGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TTEEEECCCBCTTEEEEEEEECC--------------SSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ccccccceeeCCCceeEEEEEeC--------------CCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 45689999999999999988876 467 9999999999999999999885
No 101
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=97.56 E-value=2.4e-05 Score=65.91 Aligned_cols=43 Identities=23% Similarity=0.448 Sum_probs=35.1
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+|++.+.||++.++ .|..+ +.|| |.|||| .|.++||++.|.|.
T Consensus 62 ~~~~~~~pG~~~~~--~f~~~-----------~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 62 HKQLLMSPGQSTST--TFPAD-----------APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp BCSCCCSTTCEEEE--ECCTT-----------CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ccceeeCCCCEEEE--EEecC-----------CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 47889999999988 55210 1568 999999 89999999999885
No 102
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=97.48 E-value=6.6e-05 Score=62.24 Aligned_cols=39 Identities=26% Similarity=0.473 Sum_probs=34.4
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+|++.+.||++.++ .|+ .|| |.|||| .|.+.||++.|.|
T Consensus 58 ~~~~~~~pG~~~~~--tf~--------------~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 58 HKGLLFAAGESFTS--TFT--------------EPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEEECSTTCEEEE--ECC--------------SCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccccccCCCCEEEE--EcC--------------CCeEEEEEcC--CccccCCeEEEEE
Confidence 67899999999888 565 567 999999 7999999999987
No 103
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.39 E-value=0.00035 Score=60.66 Aligned_cols=35 Identities=9% Similarity=0.119 Sum_probs=28.5
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
+.||+++ +|.| ..+|+|||+|-.|. .|.|.|+|.+
T Consensus 58 ~~~g~t~---~~tF---~~~G~y~y~C~~H~--------~M~G~I~V~~ 92 (122)
T 2ux6_A 58 SKINENY---KVTF---TAPGVYGVKCTPHP--------FMVGVVQVGD 92 (122)
T ss_dssp CCTTCCE---EEEE---CSCEEEEEEETTEE--------EEEEEEEESS
T ss_pred cCCCCEE---EEEe---CCCEEEEEEeCCCc--------cCEEEEEEeC
Confidence 4588888 7877 37999999998752 3999999986
No 104
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.36 E-value=0.00028 Score=61.86 Aligned_cols=42 Identities=17% Similarity=0.055 Sum_probs=31.7
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.|.||+++ ++.|..+ .+.|+|||.|-..|. +.||.|.|+|.+
T Consensus 86 ~l~pGet~---svtf~~~~l~~G~~Y~f~C~~pgH-----~~gM~G~i~V~~ 129 (129)
T 2ccw_A 86 VIGGGESD---SVTFDVSKIAAGENYAYFCSFPGH-----WAMMKGTLKLGS 129 (129)
T ss_dssp CBCTTCEE---EEEEEGGGSCTTCCEEEECCSTTG-----GGTSEEEEEECC
T ss_pred EECCCCEE---EEEEeccccCCCceEEEEeCCCCh-----hHcCEEEEEEeC
Confidence 47899998 8889874 333459999976542 348999999963
No 105
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=97.33 E-value=0.00013 Score=60.50 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=34.1
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+|++.+.||++.++ .|+ .|| |.|||+ .|.+.||++.|.|
T Consensus 59 ~~~~~~~~G~~~~~--~f~--------------~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 59 EEDLLNAPGEEYSV--TLT--------------EKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp TTCCBCSTTCEEEE--EEC--------------SCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccceeeCCCCEEEE--EeC--------------CCcEEEEEcC--CccccCCEEEEEE
Confidence 67788999999888 666 457 999999 8999999999987
No 106
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.22 E-value=0.0005 Score=60.17 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=32.1
Q ss_pred ccCCCCCcceeeEEEEcC-ccCce-eEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM-QQPGN-TWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~-~~~Gt-~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.+.||+++ ++.|... -.+|+ |+|.|-..|. +.||.|.|+|.+
T Consensus 85 ~l~pGes~---~vtf~~~~l~~G~~Y~f~C~~PgH-----~~gM~G~i~V~~ 128 (128)
T 2iaa_C 85 VIGGGETD---SVTFDVSKLKEGEDYAFFCSFPGH-----WSIMKGTIELGS 128 (128)
T ss_dssp CBCTTCEE---EEEEESSCCCTTCCEEEECCSTTC-----TTTSEEEEEECC
T ss_pred eeCCCCEE---EEEEeccccCCCceEEEEECCCCh-----hHCCEEEEEEeC
Confidence 47899998 8888873 15775 9999976542 349999999963
No 107
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=97.22 E-value=0.00014 Score=60.15 Aligned_cols=39 Identities=23% Similarity=0.557 Sum_probs=34.2
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
++++.+.||++.++ .|+ .|| |.|||+ .|.++||++.+.|
T Consensus 57 ~~~~~~~~g~~~~~--tf~--------------~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 57 NTKLAIAPGSFYSV--TLG--------------TPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp BCCCCCSCSCCEEE--ECC--------------SCSEEEEECS--STTTTTCEEEEEE
T ss_pred ccceecCCCCEEEE--EeC--------------CCeEEEEEcc--ChhhcCCEEEEEE
Confidence 58889999999888 565 567 999999 9999999999987
No 108
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=97.20 E-value=0.00016 Score=60.39 Aligned_cols=41 Identities=22% Similarity=0.362 Sum_probs=35.0
Q ss_pred Cc-CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 491 GW-KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 491 ~w-kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+| .+++.+.||++.++ .|+ .|| |.|||+ .|.++||.+.|.|
T Consensus 59 ~~~~~~~~~~pG~~~~~--tf~--------------~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 59 SMDENDLLSEDEPSFKA--KVS--------------TPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp SCCTTCCBBTTBCEEEE--CCC--------------SCEEEEEECS--TTGGGTCEEEEEE
T ss_pred cccccceecCCCCEEEE--EeC--------------CCeEEEEEeC--CCcccCCeEEEEE
Confidence 45 47888999999888 555 567 999999 9999999999987
No 109
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=97.18 E-value=0.00024 Score=57.74 Aligned_cols=39 Identities=31% Similarity=0.597 Sum_probs=33.9
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+++.+.||++.++ .|+ .|| |.|||| .|.+.||++.+.|
T Consensus 51 ~~~~~~~~g~~~~~--~f~--------------~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 51 HKDLAFSPGETFEA--TFS--------------EPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEEECSTTCEEEE--ECC--------------SCEEEEEECT--TTGGGTCEEEEEE
T ss_pred cccceeCCCCEEEE--EeC--------------CCEEEEEEeC--CCccCCCEEEEEE
Confidence 67889999998887 565 567 999999 8999999999987
No 110
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.13 E-value=0.0024 Score=55.81 Aligned_cols=41 Identities=12% Similarity=0.143 Sum_probs=31.1
Q ss_pred ccCCCCCcceeeEEEEcCc-cCce-eEEeccCCCchhhhhhccceEEEEEe
Q 008840 169 FEEKGPTWTNETYHYHNMQ-QPGN-TWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~-~~Gt-~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+.||+++ ++.|.... .+|+ |||.|-..|. +.||.|-|+|.
T Consensus 86 ~l~pGet~---svtf~~~~l~~G~~Y~f~C~~PgH-----~~gM~G~i~V~ 128 (128)
T 1nwp_A 86 VIGAGEKD---SVTFDVSKLAAGEKYGFFCSFPGH-----ISMMKGTVTLK 128 (128)
T ss_dssp CBCTTCEE---EEEEEGGGSCTTSCEEEECCSTTC-----GGGSEEEEEEC
T ss_pred eeCCCCEE---EEEEeccccCCCceEEEEECCCCh-----hHCCEEEEEEC
Confidence 47899998 88888731 4666 9999986542 23899999984
No 111
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.97 E-value=0.0021 Score=69.15 Aligned_cols=80 Identities=15% Similarity=0.141 Sum_probs=56.6
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|+|++||+|++.++|..... .+.+++...++ | +.. .+.||++.
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~ve------------------DViHSF~IPsl-------G-----IK~-DaiPGrtn--- 602 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIE------------------DVSHGFVVVNH-------G-----VSM-EISPQQTS--- 602 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCST------------------TCCEEEEETTT-------T-----EEE-EECTTCEE---
T ss_pred CCEEEEecCceeEEEEecCCcCC------------------CceeeeEecCC-------C-----cee-eeCCCCeE---
Confidence 56999999999999999963210 01344443322 1 111 36789887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|.++ .+|+|||+|....... | .+|.|.++|+
T Consensus 603 svtFtad-kPGvY~y~CSE~CGa~-H--s~M~G~ViVE 636 (638)
T 3sbq_A 603 SITFVAD-KPGLHWYYCSWFCHAL-H--MEMVGRMMVE 636 (638)
T ss_dssp EEEEECC-SCEEEEEECCSCCSTT-C--TTCEEEEEEE
T ss_pred EEEEEcC-CCEEEEEECCCcCCCC-c--ccceEEEEEe
Confidence 8999996 9999999999644322 2 6899999998
No 112
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.76 E-value=0.0013 Score=55.89 Aligned_cols=42 Identities=14% Similarity=0.289 Sum_probs=35.0
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
+..+.||++.++.+.++ .|| |.||||+..|..+ |.+.++|.+
T Consensus 70 ~~~i~pG~~~~~~f~~~--------------~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTAD--------------KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEECC--------------SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eeEeCCCCEEEEEEECC--------------CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 67899999999977665 568 9999999988766 888888853
No 113
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=96.43 E-value=0.0018 Score=53.59 Aligned_cols=39 Identities=18% Similarity=0.354 Sum_probs=33.1
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.+.+.||++.++ .|+ .|| |.|||+ .|.++||.+.+.|
T Consensus 59 ~~~~~~~~G~~~~~--tf~--------------~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 59 EEDLLNAKGETFEV--ALS--------------NKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp TTCCBCSTTCEEEE--ECC--------------SCEEEEEECG--GGTTTTCEEEEEE
T ss_pred cCccccCCCCEEEE--EEC--------------CCceEEEEcC--CCcccCCEEEEEE
Confidence 46678899999888 666 467 999999 7999999999887
No 114
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.29 E-value=0.13 Score=46.74 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=52.4
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceee
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~ 180 (551)
..|+++.|++|++.++|. +- .++...-++ |. .. .+.||..- .
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DV---------------------iHsf~IP~l-------gi-----k~-da~PG~~n---~ 134 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DV---------------------IHGFHVEGT-------NI-----NV-EVLPGEVS---T 134 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SS---------------------CEEEEETTS-------SC-----EE-EECTTBCE---E
T ss_pred CEEEEeCCCeEEEEEecC-Cc---------------------eEEEEECCC-------Ce-----EE-EecCCcee---E
Confidence 379999999999999996 22 344333222 11 11 24578766 7
Q ss_pred EEEEcCccCceeEEeccC-CCchhhhhhccceEEEEEeC
Q 008840 181 YHYHNMQQPGNTWYHDHT-MGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 181 y~f~~~~~~Gt~wYH~H~-~g~t~~qv~~GL~G~~iV~d 218 (551)
+.|..+ ++|+|+|.|.. .|.- -++|.|-++|++
T Consensus 135 ~~~~~~-kpG~y~g~Cse~CG~~----Hs~M~g~V~V~e 168 (168)
T 3s8f_B 135 VRYTFK-RPGEYRIICNQYCGLG----HQNMFGTIVVKE 168 (168)
T ss_dssp EEEECC-SCEEEEEECCSCCSTT----GGGCEEEEEEEC
T ss_pred EEEEeC-CCEEEEEECCcCCCCC----cCCCEEEEEEeC
Confidence 888885 89999999984 4432 378999999973
No 115
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=95.69 E-value=0.0088 Score=49.50 Aligned_cols=38 Identities=21% Similarity=0.234 Sum_probs=32.2
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
..+.||+..++.+.|+ .|| |-|+|. .|...||.+.+.|
T Consensus 61 ~~~~pg~~~~~~~t~~--------------~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 61 VVVESGKEKNITVKPK--------------SAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp EEECTTCEEEEEECCC--------------SCEEEEEECT--TTGGGTCEEEEEE
T ss_pred eeecCCcceeEEEecc--------------cCceEEEECc--cccCCCCEEEEEE
Confidence 4578999999977776 568 999997 5999999998877
No 116
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.96 E-value=0.13 Score=44.38 Aligned_cols=38 Identities=8% Similarity=0.123 Sum_probs=28.6
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.|.||+++ +..|... ..+|+|.|-|--| + ||.|.++|.
T Consensus 86 ~l~pGes~---~vtf~~~~l~~~G~y~f~C~gH-------~-~M~G~v~V~ 125 (125)
T 3fsa_A 86 LIGSGEKD---SVTFDVSKLKEGEQYMFFCAAH-------A-AMKGTLTLK 125 (125)
T ss_dssp CBCTTCEE---EEEEEGGGC---CCEEEECSSS-------T-TCEEEEEEC
T ss_pred eeCCCcEE---EEEEeCcCcCCCccEEEEcCCC-------C-CcEEEEEEC
Confidence 47899998 7888874 2789999999943 2 899999884
No 117
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=94.81 E-value=0.11 Score=45.52 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=49.9
Q ss_pred EEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeE
Q 008840 102 TIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETY 181 (551)
Q Consensus 102 ti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y 181 (551)
.|+++.|++|++.++|.- . .+++-. +.. |. .. .+.||..- ++
T Consensus 61 ~l~Vp~G~~V~~~vts~D-V---------------------~Hsf~i-----p~~--~~-----k~-d~~PG~~~---~~ 102 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD-V---------------------IHGFHV-----EGT--NI-----NV-EVLPGEVS---TV 102 (135)
T ss_dssp SEEEETTSEEEEEEEBSS-S---------------------CEEEEE-----TTS--SC-----EE-EECBTBCE---EE
T ss_pred EEEEcCCCEEEEEEEeCC-c---------------------cceEEe-----cCC--Cc-----ee-EeCCCCcE---EE
Confidence 899999999999999962 1 344332 211 11 11 24678765 78
Q ss_pred EEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 182 HYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 182 ~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.|..+ .+|+|+|+|...--. .| .+|.|.++|.
T Consensus 103 ~~~~~-~~G~y~~~C~e~CG~-~H--~~M~g~v~V~ 134 (135)
T 2cua_A 103 RYTFK-RPGEYRIICNQYCGL-GH--QNMFGTIVVK 134 (135)
T ss_dssp EEECC-SCEEEEEECCSCCST-TS--TTCEEEEEEE
T ss_pred EEEcC-CCEEEEEECcccCCC-Cc--CCCEEEEEEE
Confidence 88885 999999999542111 12 6899999986
No 118
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=94.38 E-value=0.022 Score=51.27 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=30.7
Q ss_pred EeCCCc--EEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 497 KITPGY--VTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 497 ~v~pg~--~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.||+ +.++.+.+ .|| |.||||+--|...||-+.+.|
T Consensus 113 ~i~PG~sgt~t~tft~---------------~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 113 VPKDGKFGYTDFTWHP---------------TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp CCBTTBEEEEEEEECC---------------CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred ccCCCCceEEEEEEEE---------------CCceEEEECCCCCHHHCCCEEEEEE
Confidence 568999 66664444 246 999999999999999999877
No 119
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=93.48 E-value=0.044 Score=45.70 Aligned_cols=33 Identities=27% Similarity=0.550 Sum_probs=25.6
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.||++.++ .|+ .+| |.|||++ |. ||-+.+.|
T Consensus 71 ~~~pG~~~~~--tf~--------------~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 71 MMKKEQAYSL--TFT--------------EAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CBCTTEEEEE--EEC--------------SCEEEEEECSS--CT--TCEEEEEE
T ss_pred ccCCCCEEEE--EeC--------------CCEEEEEEeCC--CC--CCEEEEEE
Confidence 4789998776 566 567 9999998 65 88887776
No 120
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=92.88 E-value=0.084 Score=43.23 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=30.8
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
...+.||++.++ .|+ .|| |.|+|-+ |..+||-+.+.|
T Consensus 60 ~~~~~~g~~~~~--tf~--------------~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 60 DYLNSKGETVVR--KLS--------------TPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEECSTTCEEEE--ECC--------------SCEEEEEECTT--TGGGTCEEEEEE
T ss_pred ccccCCCCEEEE--EcC--------------CCEEEEEEchh--hccCCCEEEEEE
Confidence 467899998887 565 567 9999986 999999998877
No 121
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=89.99 E-value=0.16 Score=43.83 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=29.4
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+.||++.++ .|+ .|| |.|||- .|..+||.+.+.|-
T Consensus 58 ~~~pg~t~s~--TF~--------------~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 58 KGGFSKEVVF--NAE--------------KEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp BCCTTCCEEE--ECC--------------SSEEEEEECT--TTGGGTCEEEEEES
T ss_pred ccCCCCEEEE--EeC--------------CCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 3568888776 666 568 999996 89999999999874
No 122
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.85 E-value=0.24 Score=53.97 Aligned_cols=39 Identities=23% Similarity=0.375 Sum_probs=32.3
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecc---ccccccCcccceEEc
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHI---LDHEDNIMMRPLKLI 550 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHi---L~HED~GMM~~~~V~ 550 (551)
+.+.||++.++.+.|+ .|| |.||||. ..|. ||.+.+.|.
T Consensus 549 ~~i~PG~t~t~~Fta~--------------~pGtY~yhC~e~Cg~~H~--gM~G~IiV~ 591 (595)
T 1fwx_A 549 MEIGPQMTSSVTFVAA--------------NPGVYWYYCQWFCHALHM--EMRGRMLVE 591 (595)
T ss_dssp EEECTTCEEEEEEECC--------------SCEEEEEECCSCCSTTCT--TCEEEEEEE
T ss_pred eeeCCCCeEEEEEECC--------------CCEEEEEECCCCCCCCcc--CCEEEEEEE
Confidence 6789999999988776 578 9999994 4675 999999885
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=89.84 E-value=0.23 Score=42.72 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=29.2
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+.||++.++ .|+ .|| |.|+|- .|...||.+.+.|-
T Consensus 58 ~~pg~t~s~--TF~--------------~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 58 SKINESYTL--TVT--------------EPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp CCTTCCEEE--EEC--------------SCEEEEEECG--GGTTTTCEEEEEES
T ss_pred cCCCCEEEE--EeC--------------CCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 568887766 666 568 999999 89999999999874
No 124
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=88.83 E-value=0.21 Score=43.22 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=28.6
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+.||++.++ .|+ .|| |.|||- .|...||-+.+.|.
T Consensus 60 s~pGet~s~--TF~--------------~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 60 GKINEEITV--TLS--------------KPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp CCTTCCCEE--ECC--------------SCEEEEEECT--TTGGGTCEEEEEES
T ss_pred cCCCCEEEE--EeC--------------CCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 468887665 666 568 999999 69999999999885
No 125
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=86.09 E-value=0.46 Score=39.41 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=26.5
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
-.+.||++.++ .|+ .|| |.|+|-+ |. ||-+.+.|
T Consensus 71 ~~l~~g~~~~~--tf~--------------~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 71 EMMTKDQAYAI--TFN--------------EAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CCBCTTEEEEE--EEC--------------SCEEEEEECSS--CT--TCEEEEEE
T ss_pred cccCCCCEEEE--EeC--------------CCEEEEEEeCC--CC--CCEEEEEE
Confidence 35789998877 566 567 9999987 76 88888776
No 126
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=86.02 E-value=0.41 Score=41.09 Aligned_cols=36 Identities=25% Similarity=0.369 Sum_probs=28.9
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+.||++.++ .|+ .+| |.|+|- .|..+||-+.|.|.
T Consensus 57 ~~~pG~t~~~--tF~--------------~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 57 KTTVGQEAVV--KFD--------------KEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp BCCTTSCEEE--ECC--------------SCEEEEEECS--TTTTTTCEEEEEES
T ss_pred ecCCCCEEEE--EeC--------------CCeEEEEEeC--CccccCCEEEEEEc
Confidence 3568997665 666 567 999998 59999999999885
No 127
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=85.08 E-value=0.55 Score=40.27 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=28.2
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+.||++.++ .|+ .|| |.|+|- .|..+||-+.|.|.
T Consensus 58 ~~pG~t~~~--tF~--------------~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1paz_A 58 SKINENYVL--TVT--------------QPGAYLVKCT--PHYAMGMIALIAVG 93 (123)
T ss_dssp CCTTCCEEE--ECC--------------SCEEEEEECT--TTGGGTCEEEEEES
T ss_pred cCCCCEEEE--EeC--------------CCEEEEEEeC--CcccCCCEEEEEEc
Confidence 468887665 666 567 999997 59999999999885
No 128
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=83.16 E-value=0.72 Score=39.96 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=26.9
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+-.+.||++.++ .|+ .|| |-|||-+ |. ||-+.+.|
T Consensus 96 s~~l~pG~t~~~--tF~--------------~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 96 GEMMTKDQAYAI--TFN--------------EAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CCCBCTTEEEEE--EEC--------------SCEEEEEECSS--CT--TCEEEEEE
T ss_pred ccccCCCCEEEE--EcC--------------CCEEEEEEeCC--Cc--CCEEEEEE
Confidence 335789998876 566 457 9999987 77 88888776
No 129
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=82.84 E-value=0.76 Score=41.64 Aligned_cols=46 Identities=17% Similarity=0.329 Sum_probs=35.2
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
..|..|.||++.+|.|.+... .|| |-|+|-+--|.. ||-+.|.|.+
T Consensus 121 ~~t~~l~pGet~svtf~~~~l------------kpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 121 AHTKLIGGGEESSLTLDPAKL------------ADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EECCCBCTTCEEEEEECGGGG------------TTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred ccceeeCCCCEEEEEEecCCC------------CCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 346678999999997765411 246 999999999988 8888888753
No 130
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=82.11 E-value=6.6 Score=33.36 Aligned_cols=84 Identities=17% Similarity=0.103 Sum_probs=54.3
Q ss_pred ECCcccCceeec--C--eEEEEEEEecCCCceEEEEEcCCceEEEEEcC--CCCCC-------CceEecEEEEccCceEE
Q 008840 276 VNGKAWPRMTVR--R--RKYRFRIINASNARFFRFFFTNGLRFIHVGSD--SAYLG-------KPVVTNDTVLAPAEIAD 342 (551)
Q Consensus 276 VNG~~~P~~~v~--~--~~~RlRllNas~~~~~~l~l~~g~~~~via~D--G~~l~-------~P~~~~~l~l~pgeR~d 342 (551)
+||..-+.++.. + -...|.+.|.+.. ...|.+..|+.+.++-.| |..+= -........|.|||...
T Consensus 3 ~~~~l~~~v~~~~~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~ 81 (120)
T 3isy_A 3 ENQEVVLSIDAIQEPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYD 81 (120)
T ss_dssp -CCSEEEEEEEEECSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEE
T ss_pred cccEEEEEEeeccCCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEE
Confidence 355554444422 2 2788888999854 466777778775555544 54321 12245789999999999
Q ss_pred EEEEcCCC-CCceEEEecC
Q 008840 343 VVIDFSES-TSDVAILAND 360 (551)
Q Consensus 343 Vlv~~~~~-~g~~~~L~~~ 360 (551)
.-+..++. ..++|+|..-
T Consensus 82 f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 82 FSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEESSCCCSEEEEEEEE
T ss_pred EEEEeCCCCCCccEEEEEE
Confidence 99999853 3458888753
No 131
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=76.44 E-value=2 Score=37.05 Aligned_cols=46 Identities=22% Similarity=0.312 Sum_probs=35.2
Q ss_pred ccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 494 NVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 494 DTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
.|..|.||++.+|.+.|.... -|+ |-|.|-+--|.. ||-+.+.|.+
T Consensus 82 ~t~~l~pGes~~vtf~~~~l~-----------~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 82 HTSVIGGGETDSVTFDVSKLK-----------EGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp ECCCBCTTCEEEEEEESSCCC-----------TTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred cceeeCCCCEEEEEEeccccC-----------CCceEEEEECCCChhH-CCEEEEEEeC
Confidence 466789999999977764110 235 999999999988 8988888853
No 132
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=75.43 E-value=2.1 Score=36.90 Aligned_cols=45 Identities=27% Similarity=0.321 Sum_probs=34.8
Q ss_pred ccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 494 NVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 494 DTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.|..|.||++.+|.+.++.. ..|| |-|.|-+--|.. ||-+.+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~~-----------~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 83 FTPIIGGGEKTSVKFKVSAL-----------SKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGC-----------CTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eeeEECCCCEEEEEEecccc-----------CCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 46678999999997766410 1357 999999999988 888888875
No 133
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=72.37 E-value=3 Score=35.92 Aligned_cols=46 Identities=24% Similarity=0.302 Sum_probs=35.1
Q ss_pred ccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 494 NVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 494 DTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
.|..|.||++.+|.+.++... -|+ |-|.|-+--|.. ||-+.+.|.+
T Consensus 83 ~t~~l~pGet~svtf~~~~l~-----------~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIA-----------AGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSC-----------TTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred eeeEECCCCEEEEEEeccccC-----------CCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 456789999999977764110 236 999999999988 8888888753
No 134
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=70.59 E-value=3.6 Score=35.23 Aligned_cols=45 Identities=22% Similarity=0.318 Sum_probs=33.0
Q ss_pred CCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 490 QGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 490 ~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+..-.|.+|.||++.+|.+.|... ..+| |-|-|- -|. ||-+.+.|
T Consensus 79 ~via~t~~l~pGes~~vtf~~~~l-----------~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 79 RVIAHTKLIGSGEKDSVTFDVSKL-----------KEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp TCCEECCCBCTTCEEEEEEEGGGC--------------CCEEEECS--SST--TCEEEEEE
T ss_pred cceeccceeCCCcEEEEEEeCcCc-----------CCCccEEEEcC--CCC--CcEEEEEE
Confidence 344567789999999997776521 1346 999999 888 88888876
No 135
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=69.93 E-value=3.2 Score=35.71 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=33.3
Q ss_pred ccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 494 NVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 494 DTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.|..|.||++.+|.+.+.... -|+ |-|.|-+--|.. ||-+.+.|
T Consensus 83 ~t~~l~pGet~svtf~~~~l~-----------~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 83 HTKVIGAGEKDSVTFDVSKLA-----------AGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp ECCCBCTTCEEEEEEEGGGSC-----------TTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred eeeeeCCCCEEEEEEeccccC-----------CCceEEEEECCCChhH-CCEEEEEE
Confidence 455799999999977763111 236 999999999988 78877776
No 136
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=68.36 E-value=3.4 Score=35.14 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=25.5
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+.||++.++ .|+ .|| |.|+|-+ |.. |-+.+.|.
T Consensus 57 ~~~~g~t~~~--tF~--------------~~G~y~y~C~~--H~~--M~G~I~V~ 91 (122)
T 2ux6_A 57 KSKINENYKV--TFT--------------APGVYGVKCTP--HPF--MVGVVQVG 91 (122)
T ss_dssp BCCTTCCEEE--EEC--------------SCEEEEEEETT--EEE--EEEEEEES
T ss_pred ecCCCCEEEE--EeC--------------CCEEEEEEeCC--Ccc--CEEEEEEe
Confidence 3468887666 666 567 9999987 776 88888774
No 137
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=60.24 E-value=8.2 Score=33.40 Aligned_cols=39 Identities=28% Similarity=0.572 Sum_probs=30.7
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecc---ccccccCcccceEEc
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHI---LDHEDNIMMRPLKLI 550 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHi---L~HED~GMM~~~~V~ 550 (551)
+.+.||+..++.+.|+ .|| |-++|.. ..| .+|-..++|+
T Consensus 92 ~d~~PG~~~~~~~~~~--------------~~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 92 VEVLPGEVSTVRYTFK--------------RPGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEECBTBCEEEEEECC--------------SCEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred eEeCCCCcEEEEEEcC--------------CCEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 5578898888888887 568 9999988 556 4788888775
No 138
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=50.71 E-value=14 Score=39.93 Aligned_cols=40 Identities=23% Similarity=0.339 Sum_probs=32.0
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccc-cCcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHED-NIMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED-~GMM~~~~V 549 (551)
+.+.||++..+.+.|+ .|| |.|||..+-|.- .+|.+.+.|
T Consensus 594 ~DaiPGrtnsvtFtad--------------kPGvY~y~CSE~CGa~Hs~M~G~ViV 635 (638)
T 3sbq_A 594 MEISPQQTSSITFVAD--------------KPGLHWYYCSWFCHALHMEMVGRMMV 635 (638)
T ss_dssp EEECTTCEEEEEEECC--------------SCEEEEEECCSCCSTTCTTCEEEEEE
T ss_pred eeeCCCCeEEEEEEcC--------------CCEEEEEECCCcCCCCcccceEEEEE
Confidence 4688999999988876 578 999999887764 568777766
No 139
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=49.36 E-value=30 Score=28.80 Aligned_cols=48 Identities=17% Similarity=0.419 Sum_probs=34.0
Q ss_pred EEEEEEEecCC-CceEEEEEcCCc-eEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCC
Q 008840 290 KYRFRIINASN-ARFFRFFFTNGL-RFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSE 349 (551)
Q Consensus 290 ~~RlRllNas~-~~~~~l~l~~g~-~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~ 349 (551)
.|+|+|+|.+. .+.|.|++. |. .+.+++ + ..+.+.|||..++-|....
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~-g~~~l~~~g--------~---~~i~v~~g~~~~~~v~v~~ 83 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVK-GLNDVSWYG--------K---QTIQVEPGEVLNLPMSLGA 83 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEE-SCSSCEEES--------C---CEEEECTTCEEEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEe-CCcccEEeC--------C---CcEEECCCCEEEEEEEEEE
Confidence 89999999994 458888884 52 244332 1 1499999998887775543
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=38.11 E-value=84 Score=29.07 Aligned_cols=77 Identities=13% Similarity=-0.003 Sum_probs=50.1
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceee
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~ 180 (551)
-.|.+..|++|++.+++.-- + ||..++.- | +.. .+.||..- .
T Consensus 41 n~l~lP~g~~V~~~lTS~DV-------------------------i--HSF~IP~l--g-----vK~-daiPGr~n---~ 82 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNSV-------------------------M--HSFFIPRL--G-----SQI-YAMAGMQT---R 82 (205)
T ss_dssp SEEEEETTSCEEEEEEESSS-------------------------C--EEEEEGGG--T-----EEE-EECTTCCE---E
T ss_pred ceEEEeCCCEEEEEEecCCc-------------------------e--eeEEeccc--C-----cEE-EecCCceE---E
Confidence 37999999999999998521 2 23332221 1 111 24467665 7
Q ss_pred EEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe-CC
Q 008840 181 YHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR-HP 219 (551)
Q Consensus 181 y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~-dp 219 (551)
..|.++ .+|+|+..|.-.--.. -+.|.+-+++. ++
T Consensus 83 l~~~~~-~pG~y~g~CsE~CG~~---Hs~M~~~v~vv~~~ 118 (205)
T 1cyx_A 83 LHLIAN-EPGTYDGICAEICGPG---HSGMKFKAIATPDR 118 (205)
T ss_dssp EEECCS-SSEEEEEEECSCCSTT---STTCCEEEEEESSH
T ss_pred EEEEeC-CCeEEEEEcccccccc---hhhceEEEEEECCH
Confidence 778885 9999999997532221 36788888887 54
No 141
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=29.59 E-value=73 Score=27.46 Aligned_cols=47 Identities=9% Similarity=0.121 Sum_probs=35.8
Q ss_pred CceEEECCcccCceee---cCe-----EEEEEEEecCCCceEEEEEcCCceEEEE
Q 008840 271 GDVIVVNGKAWPRMTV---RRR-----KYRFRIINASNARFFRFFFTNGLRFIHV 317 (551)
Q Consensus 271 gd~~lVNG~~~P~~~v---~~~-----~~RlRllNas~~~~~~l~l~~g~~~~vi 317 (551)
|.++.+||+++-.+++ +++ .+|+++.|.-+-+.+.-.+..++.+.+.
T Consensus 15 G~~i~~~g~p~~Vve~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~ve~~ 69 (138)
T 1iz6_A 15 GRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEVDVP 69 (138)
T ss_dssp TSEEEETTEEEEEEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETTSEEEEE
T ss_pred CCEEEECCEEEEEEEEEeecCCCCCceEEEEEEEECCCCCEEEEEecCCCEEeec
Confidence 7899999999887764 333 5999999988877776666556666654
No 142
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=26.45 E-value=66 Score=28.77 Aligned_cols=41 Identities=22% Similarity=0.445 Sum_probs=31.2
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccc-cccccCcccceEEc
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHIL-DHEDNIMMRPLKLI 550 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL-~HED~GMM~~~~V~ 550 (551)
+.+.||...++.+.|+ .|| |-+.|..+ -+-+.+|...+.|.
T Consensus 125 ~da~PG~~n~~~~~~~--------------kpG~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 125 VEVLPGEVSTVRYTFK--------------RPGEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEECTTBCEEEEEECC--------------SCEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEecCCceeEEEEEeC--------------CCEEEEEECCcCCCCCcCCCEEEEEEe
Confidence 4567899888888876 568 99999964 45567788887764
No 143
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=25.62 E-value=5.2e+02 Score=25.91 Aligned_cols=16 Identities=19% Similarity=-0.020 Sum_probs=12.7
Q ss_pred cccCCCCCcceeeEEEEcC
Q 008840 168 GFEEKGPTWTNETYHYHNM 186 (551)
Q Consensus 168 ~~i~pG~~~~~~~y~f~~~ 186 (551)
.+|+|||+. +.+..+.
T Consensus 320 ~pI~PGETr---~~~v~a~ 335 (382)
T 1yew_A 320 SPLAPGETR---TVDVTAS 335 (382)
T ss_dssp SCBCTTCEE---EEEEEEE
T ss_pred CCcCCCcee---EEEEEee
Confidence 369999998 8887773
No 144
>2eif_A IF-5A, protein (eukaryotic translation initiation factor; EIF-5A, OB-fold, structural genomics, BSGC STRU funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=24.19 E-value=1.5e+02 Score=25.25 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=36.9
Q ss_pred CCceEEECCcccCceeec-------C-eEEEEEEEecCCCceEEEEEcCCceEEEE
Q 008840 270 FGDVIVVNGKAWPRMTVR-------R-RKYRFRIINASNARFFRFFFTNGLRFIHV 317 (551)
Q Consensus 270 ~gd~~lVNG~~~P~~~v~-------~-~~~RlRllNas~~~~~~l~l~~g~~~~vi 317 (551)
.|.++.+||+++-.++++ + ..+|+++.|.-+-..+.-.+..++.+.+.
T Consensus 18 ~G~~I~~~g~p~~V~e~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~ve~~ 73 (136)
T 2eif_A 18 VGQYVMIDGVPCEIVDISVSKPGKHGGAKARVVGIGIFEKVKKEFVAPTSSKVEVP 73 (136)
T ss_dssp TTSEEEETTEEEEEEEEEECCCCSSSCCEEEEEEEESSSCCEEEEEEETTSEEEEE
T ss_pred CCCEEEECCEEEEEEEEEeecCCCCCceEEEEEEEEcCCCCeEEEEecCCCEeccc
Confidence 378999999988877653 3 47999999988877777666667777663
Done!