Query 008841
Match_columns 551
No_of_seqs 457 out of 3469
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 12:58:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008841.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008841hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 100.0 2.8E-78 9.6E-83 643.4 42.6 452 72-527 42-523 (542)
2 4dna_A Probable glutathione re 100.0 5.3E-75 1.8E-79 614.5 46.0 446 72-529 5-454 (463)
3 2wpf_A Trypanothione reductase 100.0 6.4E-74 2.2E-78 609.8 44.2 460 68-529 3-479 (495)
4 3o0h_A Glutathione reductase; 100.0 1.3E-73 4.3E-78 607.1 44.6 448 71-530 25-475 (484)
5 1ges_A Glutathione reductase; 100.0 1.3E-73 4.4E-78 601.2 43.8 444 69-523 1-448 (450)
6 3dk9_A Grase, GR, glutathione 100.0 3.7E-73 1.3E-77 603.1 47.5 445 69-524 17-477 (478)
7 1fec_A Trypanothione reductase 100.0 3.9E-73 1.3E-77 603.3 45.2 456 72-529 3-475 (490)
8 2r9z_A Glutathione amide reduc 100.0 3.1E-72 1.1E-76 592.5 47.8 445 69-525 1-448 (463)
9 3dgz_A Thioredoxin reductase 2 100.0 2.2E-72 7.6E-77 598.1 46.1 455 71-527 5-477 (488)
10 3ic9_A Dihydrolipoamide dehydr 100.0 2.1E-72 7.1E-77 598.0 45.2 450 72-534 8-473 (492)
11 3dgh_A TRXR-1, thioredoxin red 100.0 4E-72 1.4E-76 595.7 46.7 453 71-525 8-475 (483)
12 3qfa_A Thioredoxin reductase 1 100.0 5.5E-72 1.9E-76 598.3 47.7 460 68-529 28-507 (519)
13 2hqm_A GR, grase, glutathione 100.0 1.2E-71 4.1E-76 590.8 47.8 442 71-523 10-469 (479)
14 1onf_A GR, grase, glutathione 100.0 3.4E-71 1.2E-75 590.2 49.9 440 72-525 2-496 (500)
15 3urh_A Dihydrolipoyl dehydroge 100.0 5.5E-71 1.9E-75 588.1 50.3 445 68-526 21-482 (491)
16 3l8k_A Dihydrolipoyl dehydroge 100.0 4.7E-71 1.6E-75 584.6 46.3 436 69-526 1-455 (466)
17 3lad_A Dihydrolipoamide dehydr 100.0 1.7E-70 6E-75 582.4 48.6 450 71-526 2-462 (476)
18 1ojt_A Surface protein; redox- 100.0 1.9E-70 6.6E-75 582.3 48.9 447 68-526 2-468 (482)
19 2eq6_A Pyruvate dehydrogenase 100.0 2.1E-70 7.2E-75 579.0 48.5 440 72-526 6-452 (464)
20 2qae_A Lipoamide, dihydrolipoy 100.0 4.7E-70 1.6E-74 577.7 48.7 444 72-526 2-459 (468)
21 1ebd_A E3BD, dihydrolipoamide 100.0 2.1E-69 7.3E-74 570.6 50.1 441 72-525 3-451 (455)
22 1xdi_A RV3303C-LPDA; reductase 100.0 1.6E-69 5.6E-74 577.6 48.9 444 72-526 2-462 (499)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 1.8E-69 6.1E-74 574.1 47.8 445 71-526 5-464 (474)
24 2a8x_A Dihydrolipoyl dehydroge 100.0 2.2E-69 7.5E-74 571.9 47.9 442 72-526 3-455 (464)
25 1dxl_A Dihydrolipoamide dehydr 100.0 1.3E-68 4.4E-73 567.3 47.1 444 71-526 5-461 (470)
26 1zk7_A HGII, reductase, mercur 100.0 6.8E-68 2.3E-72 560.9 52.6 443 69-526 1-453 (467)
27 1lvl_A Dihydrolipoamide dehydr 100.0 4.2E-68 1.4E-72 560.5 46.7 438 72-525 5-448 (458)
28 1mo9_A ORF3; nucleotide bindin 100.0 1.4E-68 4.8E-73 572.8 42.4 443 69-531 40-520 (523)
29 2yqu_A 2-oxoglutarate dehydrog 100.0 4.1E-67 1.4E-71 553.2 47.5 442 72-526 1-446 (455)
30 1v59_A Dihydrolipoamide dehydr 100.0 3.6E-67 1.2E-71 557.2 47.0 445 69-526 2-469 (478)
31 2x8g_A Thioredoxin glutathione 100.0 1.1E-65 3.9E-70 560.0 44.5 453 71-525 106-582 (598)
32 4eqs_A Coenzyme A disulfide re 100.0 4.6E-60 1.6E-64 495.4 33.7 401 74-528 2-433 (437)
33 3oc4_A Oxidoreductase, pyridin 100.0 1E-58 3.4E-63 488.5 36.4 407 73-533 3-440 (452)
34 3kd9_A Coenzyme A disulfide re 100.0 1.7E-58 5.7E-63 486.6 36.1 412 72-535 3-444 (449)
35 2cdu_A NADPH oxidase; flavoenz 100.0 2.8E-56 9.5E-61 470.0 42.4 410 73-531 1-443 (452)
36 3iwa_A FAD-dependent pyridine 100.0 3.5E-57 1.2E-61 479.5 35.2 416 72-531 3-457 (472)
37 2bc0_A NADH oxidase; flavoprot 100.0 8.2E-56 2.8E-60 470.6 40.9 408 72-531 35-488 (490)
38 1nhp_A NADH peroxidase; oxidor 100.0 3.5E-55 1.2E-59 461.0 38.7 408 73-532 1-443 (447)
39 3cgb_A Pyridine nucleotide-dis 100.0 8.3E-55 2.8E-59 461.8 41.7 408 72-531 36-479 (480)
40 3ics_A Coenzyme A-disulfide re 100.0 5.7E-54 1.9E-58 467.1 38.5 400 71-522 35-471 (588)
41 3ntd_A FAD-dependent pyridine 100.0 5.7E-54 2E-58 465.4 37.1 402 73-523 2-456 (565)
42 2v3a_A Rubredoxin reductase; a 100.0 9.7E-47 3.3E-51 388.9 30.0 358 69-495 1-377 (384)
43 3klj_A NAD(FAD)-dependent dehy 100.0 4.4E-47 1.5E-51 390.1 18.4 358 72-523 9-384 (385)
44 1xhc_A NADH oxidase /nitrite r 100.0 2.4E-46 8.2E-51 382.7 20.4 331 73-488 9-354 (367)
45 1q1r_A Putidaredoxin reductase 100.0 1.4E-43 4.8E-48 370.2 32.4 378 70-517 2-411 (431)
46 2gqw_A Ferredoxin reductase; f 100.0 2.3E-42 7.9E-47 358.6 35.8 360 71-509 6-394 (408)
47 3lxd_A FAD-dependent pyridine 100.0 5.9E-42 2E-46 356.8 30.7 366 71-508 8-404 (415)
48 3ef6_A Toluene 1,2-dioxygenase 100.0 3.5E-41 1.2E-45 350.1 31.9 362 73-508 3-392 (410)
49 3fg2_P Putative rubredoxin red 100.0 8.8E-41 3E-45 346.6 31.3 364 73-508 2-393 (404)
50 4gcm_A TRXR, thioredoxin reduc 100.0 5.7E-39 1.9E-43 321.4 31.6 283 71-404 5-302 (312)
51 4a5l_A Thioredoxin reductase; 100.0 6.6E-39 2.3E-43 321.1 26.4 290 69-404 1-308 (314)
52 1m6i_A Programmed cell death p 100.0 6E-38 2E-42 333.0 27.5 321 68-418 7-361 (493)
53 2q7v_A Thioredoxin reductase; 100.0 6.1E-37 2.1E-41 308.4 30.5 287 68-405 4-309 (325)
54 2q0l_A TRXR, thioredoxin reduc 100.0 7.7E-37 2.6E-41 305.7 29.0 283 72-404 1-305 (311)
55 3cty_A Thioredoxin reductase; 100.0 7.4E-37 2.5E-41 307.0 28.6 286 68-404 12-312 (319)
56 3r9u_A Thioredoxin reductase; 100.0 7.7E-37 2.6E-41 305.9 27.3 286 71-404 3-308 (315)
57 4fk1_A Putative thioredoxin re 100.0 2.1E-37 7.3E-42 308.8 21.8 280 70-404 4-296 (304)
58 3f8d_A Thioredoxin reductase ( 100.0 1.7E-36 5.8E-41 304.4 26.6 282 71-404 14-313 (323)
59 1trb_A Thioredoxin reductase; 100.0 5.1E-36 1.8E-40 300.9 27.0 286 71-404 4-310 (320)
60 1fl2_A Alkyl hydroperoxide red 100.0 9.8E-36 3.4E-40 297.5 28.8 280 72-404 1-301 (310)
61 2zbw_A Thioredoxin reductase; 100.0 6.6E-36 2.3E-40 302.1 27.0 288 71-405 4-314 (335)
62 3fbs_A Oxidoreductase; structu 100.0 6.4E-36 2.2E-40 296.6 25.4 273 72-404 2-288 (297)
63 2a87_A TRXR, TR, thioredoxin r 100.0 1.9E-35 6.4E-40 298.9 25.5 285 69-404 11-312 (335)
64 3ab1_A Ferredoxin--NADP reduct 100.0 1.6E-35 5.6E-40 302.4 24.9 291 69-405 11-325 (360)
65 3itj_A Thioredoxin reductase 1 100.0 2.5E-35 8.5E-40 298.0 25.6 290 69-404 19-331 (338)
66 3lzw_A Ferredoxin--NADP reduct 100.0 2E-35 6.9E-40 297.8 22.4 284 72-405 7-312 (332)
67 4g6h_A Rotenone-insensitive NA 100.0 4.3E-36 1.5E-40 318.4 16.6 288 71-405 41-398 (502)
68 1vdc_A NTR, NADPH dependent th 100.0 1.9E-34 6.4E-39 291.2 27.3 288 72-404 8-319 (333)
69 1hyu_A AHPF, alkyl hydroperoxi 100.0 6.4E-34 2.2E-38 303.8 29.2 281 71-404 211-512 (521)
70 3d1c_A Flavin-containing putat 100.0 8.5E-34 2.9E-38 290.5 23.3 311 72-406 4-337 (369)
71 4a9w_A Monooxygenase; baeyer-v 100.0 1.5E-32 5.2E-37 279.4 24.8 298 72-405 3-349 (357)
72 2vdc_G Glutamate synthase [NAD 100.0 1.9E-33 6.4E-38 294.3 16.4 276 71-404 121-440 (456)
73 3sx6_A Sulfide-quinone reducta 100.0 1.1E-32 3.9E-37 288.5 20.6 281 70-404 2-340 (437)
74 1gte_A Dihydropyrimidine dehyd 100.0 5.2E-33 1.8E-37 318.0 18.5 278 71-405 186-505 (1025)
75 2xve_A Flavin-containing monoo 100.0 4.8E-31 1.6E-35 277.8 26.7 293 73-407 3-340 (464)
76 3h8l_A NADH oxidase; membrane 100.0 1.6E-31 5.4E-36 277.7 20.9 276 73-405 2-333 (409)
77 3vrd_B FCCB subunit, flavocyto 100.0 1.1E-31 3.8E-36 278.1 19.2 304 73-430 3-349 (401)
78 1lqt_A FPRA; NADP+ derivative, 100.0 6.6E-32 2.3E-36 283.0 14.0 276 72-405 3-384 (456)
79 1cjc_A Protein (adrenodoxin re 100.0 1.9E-31 6.5E-36 279.8 15.2 277 72-405 6-392 (460)
80 2gv8_A Monooxygenase; FMO, FAD 100.0 3E-30 1E-34 271.0 20.5 294 71-407 5-361 (447)
81 3h28_A Sulfide-quinone reducta 100.0 3.1E-31 1E-35 277.2 12.1 278 72-404 2-329 (430)
82 3hyw_A Sulfide-quinone reducta 100.0 7.6E-31 2.6E-35 273.9 13.1 278 73-404 3-329 (430)
83 1o94_A Tmadh, trimethylamine d 100.0 7.7E-31 2.6E-35 290.5 13.9 273 70-406 387-698 (729)
84 3k30_A Histamine dehydrogenase 100.0 1E-30 3.5E-35 288.4 10.1 268 68-406 387-673 (690)
85 2gag_A Heterotetrameric sarcos 100.0 3.5E-29 1.2E-33 284.5 20.4 271 71-405 127-441 (965)
86 3s5w_A L-ornithine 5-monooxyge 100.0 1.5E-28 5.2E-33 259.4 23.2 220 179-404 135-445 (463)
87 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.4E-28 4.9E-33 270.5 20.5 257 69-403 370-671 (671)
88 3gwf_A Cyclohexanone monooxyge 100.0 2.2E-27 7.5E-32 253.6 20.7 297 72-404 8-453 (540)
89 1y56_A Hypothetical protein PH 99.9 1.7E-27 5.7E-32 252.6 17.2 249 71-405 107-374 (493)
90 3uox_A Otemo; baeyer-villiger 99.9 1.1E-25 3.7E-30 240.7 23.3 299 72-404 9-462 (545)
91 4ap3_A Steroid monooxygenase; 99.9 5.1E-25 1.8E-29 235.7 21.8 297 71-404 20-467 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 2.1E-24 7.1E-29 231.7 16.0 301 71-405 15-463 (542)
93 2ywl_A Thioredoxin reductase r 99.9 3.9E-23 1.3E-27 189.0 16.4 151 247-405 3-168 (180)
94 2e5v_A L-aspartate oxidase; ar 99.8 6.2E-21 2.1E-25 200.8 5.5 308 74-404 1-365 (472)
95 4b63_A L-ornithine N5 monooxyg 99.8 9.7E-17 3.3E-21 170.1 32.1 199 206-406 199-485 (501)
96 3fpz_A Thiazole biosynthetic e 99.7 4.5E-20 1.5E-24 185.3 -13.4 244 71-404 64-321 (326)
97 2gqf_A Hypothetical protein HI 99.7 3.7E-17 1.3E-21 168.2 7.9 197 70-286 2-267 (401)
98 2cul_A Glucose-inhibited divis 99.6 1.1E-15 3.9E-20 145.2 11.2 158 246-405 4-229 (232)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.6 9.4E-17 3.2E-21 167.4 0.8 98 285-385 203-308 (431)
100 3ces_A MNMG, tRNA uridine 5-ca 99.5 1.1E-13 3.6E-18 148.0 10.6 167 71-275 27-220 (651)
101 2zxi_A TRNA uridine 5-carboxym 99.3 2.1E-11 7.2E-16 129.8 17.4 167 72-276 27-220 (637)
102 1rp0_A ARA6, thiazole biosynth 99.3 1.2E-11 4.1E-16 121.1 10.9 160 246-405 40-272 (284)
103 3dme_A Conserved exported prot 99.2 9.3E-11 3.2E-15 118.8 16.0 59 285-343 149-209 (369)
104 3v76_A Flavoprotein; structura 99.2 3.2E-10 1.1E-14 116.9 15.2 57 286-344 132-188 (417)
105 1ryi_A Glycine oxidase; flavop 99.1 1.8E-09 6E-14 110.2 15.8 58 285-344 163-220 (382)
106 1kf6_A Fumarate reductase flav 99.1 4.1E-10 1.4E-14 121.6 11.2 32 72-103 5-38 (602)
107 3nlc_A Uncharacterized protein 99.1 1.3E-10 4.4E-15 123.3 6.8 60 286-345 220-279 (549)
108 1y56_B Sarcosine oxidase; dehy 99.1 9.4E-09 3.2E-13 104.8 20.4 58 285-343 148-205 (382)
109 2gf3_A MSOX, monomeric sarcosi 99.0 1.2E-08 3.9E-13 104.3 20.9 72 269-344 135-206 (389)
110 3ps9_A TRNA 5-methylaminomethy 99.0 5.3E-09 1.8E-13 115.0 19.1 59 285-344 416-474 (676)
111 1chu_A Protein (L-aspartate ox 99.0 1.4E-10 4.9E-15 123.6 6.2 31 72-103 8-38 (540)
112 3pvc_A TRNA 5-methylaminomethy 99.0 5.9E-09 2E-13 114.8 18.9 59 285-344 411-470 (689)
113 2gag_B Heterotetrameric sarcos 99.0 5.5E-09 1.9E-13 107.3 17.2 57 286-343 174-230 (405)
114 2oln_A NIKD protein; flavoprot 99.0 1E-08 3.5E-13 105.1 19.1 56 286-343 153-208 (397)
115 3dje_A Fructosyl amine: oxygen 99.0 1.4E-08 4.8E-13 105.5 19.5 60 285-344 160-222 (438)
116 3cp8_A TRNA uridine 5-carboxym 99.0 1.4E-09 4.6E-14 116.4 11.6 168 71-275 20-214 (641)
117 3nix_A Flavoprotein/dehydrogen 99.0 9.4E-09 3.2E-13 106.2 16.7 57 287-343 107-166 (421)
118 2i0z_A NAD(FAD)-utilizing dehy 99.0 2.5E-09 8.7E-14 111.5 12.4 59 286-344 134-192 (447)
119 2uzz_A N-methyl-L-tryptophan o 98.9 2.4E-08 8.2E-13 101.3 16.8 57 286-344 149-205 (372)
120 4dgk_A Phytoene dehydrogenase; 98.9 1.2E-08 4.1E-13 108.1 14.1 58 286-343 221-278 (501)
121 3i3l_A Alkylhalidase CMLS; fla 98.8 4.9E-08 1.7E-12 104.9 17.0 58 287-344 129-189 (591)
122 3gyx_A Adenylylsulfate reducta 98.8 1.5E-08 5.1E-13 110.1 12.4 32 72-103 22-59 (662)
123 3cgv_A Geranylgeranyl reductas 98.8 2.5E-08 8.5E-13 102.1 13.4 57 287-343 103-162 (397)
124 3axb_A Putative oxidoreductase 98.8 7.6E-09 2.6E-13 107.9 9.7 59 285-344 180-255 (448)
125 2cul_A Glucose-inhibited divis 98.8 1.7E-08 5.7E-13 95.4 11.0 118 72-223 3-127 (232)
126 1pj5_A N,N-dimethylglycine oxi 98.8 5.2E-08 1.8E-12 109.6 16.3 58 285-343 150-207 (830)
127 3ka7_A Oxidoreductase; structu 98.8 7.5E-08 2.6E-12 99.5 16.1 61 286-347 196-256 (425)
128 3nyc_A D-arginine dehydrogenas 98.8 4.7E-08 1.6E-12 99.4 13.6 57 285-343 153-209 (381)
129 4at0_A 3-ketosteroid-delta4-5a 98.8 2.1E-08 7.3E-13 106.3 11.4 58 287-344 203-265 (510)
130 3rp8_A Flavoprotein monooxygen 98.8 2.8E-08 9.6E-13 102.3 11.6 56 287-345 128-183 (407)
131 1qo8_A Flavocytochrome C3 fuma 98.8 2.2E-07 7.5E-12 99.8 18.9 60 286-345 250-314 (566)
132 1s3e_A Amine oxidase [flavin-c 98.8 8.1E-09 2.8E-13 109.9 7.5 51 292-343 218-268 (520)
133 3nrn_A Uncharacterized protein 98.7 3E-08 1E-12 102.6 11.2 60 284-346 187-246 (421)
134 2bry_A NEDD9 interacting prote 98.7 2.5E-09 8.7E-14 112.9 2.9 138 209-346 37-233 (497)
135 4gut_A Lysine-specific histone 98.7 8.5E-09 2.9E-13 113.9 7.1 42 299-341 542-583 (776)
136 3oz2_A Digeranylgeranylglycero 98.7 5.3E-08 1.8E-12 99.3 12.7 58 287-344 103-163 (397)
137 1y0p_A Fumarate reductase flav 98.7 2.2E-07 7.5E-12 99.9 17.6 59 286-344 255-318 (571)
138 4a9w_A Monooxygenase; baeyer-v 98.7 1.4E-07 4.9E-12 94.6 14.9 96 246-343 4-132 (357)
139 2ywl_A Thioredoxin reductase r 98.7 5.4E-08 1.8E-12 87.9 10.2 108 72-224 1-113 (180)
140 1rp0_A ARA6, thiazole biosynth 98.7 8.9E-08 3E-12 93.4 11.8 32 72-103 39-71 (284)
141 3e1t_A Halogenase; flavoprotei 98.7 1.6E-07 5.4E-12 99.6 13.8 59 287-345 112-174 (512)
142 3da1_A Glycerol-3-phosphate de 98.7 2.8E-07 9.6E-12 98.7 15.6 59 285-343 169-232 (561)
143 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1.5E-07 5E-12 94.4 12.4 48 294-342 117-164 (342)
144 2gmh_A Electron transfer flavo 98.6 2.2E-07 7.7E-12 99.9 13.7 58 287-344 145-218 (584)
145 3jsk_A Cypbp37 protein; octame 98.6 4E-08 1.4E-12 97.3 7.0 47 72-127 79-127 (344)
146 1d4d_A Flavocytochrome C fumar 98.6 9E-07 3.1E-11 95.0 18.1 60 286-345 255-319 (572)
147 2bry_A NEDD9 interacting prote 98.6 1.2E-07 4E-12 100.1 11.0 32 71-102 91-122 (497)
148 3lzw_A Ferredoxin--NADP reduct 98.6 1.6E-07 5.3E-12 93.5 10.9 100 246-346 8-129 (332)
149 2wdq_A Succinate dehydrogenase 98.6 8.5E-07 2.9E-11 95.4 17.3 58 286-343 143-206 (588)
150 3nks_A Protoporphyrinogen oxid 98.6 8.1E-07 2.8E-11 93.2 16.8 55 287-342 235-289 (477)
151 3kkj_A Amine oxidase, flavin-c 98.6 3.4E-08 1.2E-12 94.9 5.6 41 72-121 2-42 (336)
152 3f8d_A Thioredoxin reductase ( 98.6 2.5E-07 8.5E-12 91.5 11.9 99 246-346 16-128 (323)
153 2vvm_A Monoamine oxidase N; FA 98.6 2.3E-07 7.9E-12 98.0 12.1 57 285-342 254-311 (495)
154 3fmw_A Oxygenase; mithramycin, 98.6 2.8E-07 9.6E-12 98.8 12.7 58 286-344 148-208 (570)
155 2qa1_A PGAE, polyketide oxygen 98.6 1.5E-07 5.1E-12 99.4 9.8 57 287-344 107-166 (500)
156 3p1w_A Rabgdi protein; GDI RAB 98.6 4.1E-08 1.4E-12 101.9 5.2 57 286-342 256-313 (475)
157 2e4g_A Tryptophan halogenase; 98.5 4.6E-07 1.6E-11 96.9 13.5 59 286-345 194-254 (550)
158 2zbw_A Thioredoxin reductase; 98.5 7E-07 2.4E-11 89.0 14.1 96 246-342 6-120 (335)
159 3ab1_A Ferredoxin--NADP reduct 98.5 8.8E-07 3E-11 89.3 14.7 98 246-343 15-131 (360)
160 2qa2_A CABE, polyketide oxygen 98.5 3E-07 1E-11 97.0 11.6 57 287-344 108-167 (499)
161 3c96_A Flavin-containing monoo 98.5 1.3E-06 4.4E-11 89.8 15.5 57 287-345 108-171 (410)
162 3fbs_A Oxidoreductase; structu 98.5 8.4E-07 2.9E-11 86.6 13.3 99 246-346 3-115 (297)
163 3i6d_A Protoporphyrinogen oxid 98.5 1.7E-07 5.7E-12 98.2 8.3 41 301-342 248-288 (470)
164 3itj_A Thioredoxin reductase 1 98.5 4.7E-07 1.6E-11 90.1 11.3 100 245-346 22-145 (338)
165 2q0l_A TRXR, thioredoxin reduc 98.5 1.1E-06 3.6E-11 86.7 13.6 98 247-346 3-117 (311)
166 3c4n_A Uncharacterized protein 98.5 8.4E-07 2.9E-11 91.1 13.1 57 285-343 171-236 (405)
167 2gjc_A Thiazole biosynthetic e 98.5 1.3E-06 4.4E-11 86.0 13.3 33 71-103 64-98 (326)
168 2aqj_A Tryptophan halogenase, 98.5 9.3E-07 3.2E-11 94.3 12.9 33 71-103 4-39 (538)
169 2h88_A Succinate dehydrogenase 98.4 4.5E-06 1.5E-10 90.0 18.0 59 286-344 155-218 (621)
170 2gqf_A Hypothetical protein HI 98.4 1.2E-06 4.2E-11 89.6 13.0 98 246-345 5-170 (401)
171 3klj_A NAD(FAD)-dependent dehy 98.4 5.6E-07 1.9E-11 91.6 10.3 99 246-347 10-120 (385)
172 3alj_A 2-methyl-3-hydroxypyrid 98.4 1.5E-06 5E-11 88.4 13.4 32 72-103 11-42 (379)
173 2qcu_A Aerobic glycerol-3-phos 98.4 1E-06 3.5E-11 93.1 12.3 59 285-344 148-211 (501)
174 1fl2_A Alkyl hydroperoxide red 98.4 1.3E-06 4.6E-11 85.9 11.9 100 247-346 3-118 (310)
175 3d1c_A Flavin-containing putat 98.4 2.7E-06 9.1E-11 85.9 14.3 98 246-345 5-145 (369)
176 3alj_A 2-methyl-3-hydroxypyrid 98.4 1.8E-06 6.1E-11 87.8 12.7 97 245-345 11-162 (379)
177 2q7v_A Thioredoxin reductase; 98.4 1.9E-06 6.3E-11 85.5 12.6 100 246-346 9-126 (325)
178 1vdc_A NTR, NADPH dependent th 98.4 1.2E-06 3.9E-11 87.3 11.0 98 246-346 9-127 (333)
179 2pyx_A Tryptophan halogenase; 98.4 9.5E-06 3.2E-10 86.2 18.6 58 287-345 176-235 (526)
180 2x3n_A Probable FAD-dependent 98.4 1.6E-06 5.6E-11 88.7 12.1 99 246-345 7-168 (399)
181 3sx6_A Sulfide-quinone reducta 98.4 3.4E-07 1.2E-11 95.0 6.7 98 246-347 5-116 (437)
182 2weu_A Tryptophan 5-halogenase 98.4 5.9E-06 2E-10 87.5 16.4 59 286-345 173-232 (511)
183 4fk1_A Putative thioredoxin re 98.4 3.1E-06 1.1E-10 83.1 13.0 101 247-347 8-121 (304)
184 4ap3_A Steroid monooxygenase; 98.4 2.7E-06 9.2E-11 90.7 13.3 101 246-346 22-164 (549)
185 2bs2_A Quinol-fumarate reducta 98.3 3.6E-06 1.2E-10 91.4 14.3 58 286-343 158-220 (660)
186 3gwf_A Cyclohexanone monooxyge 98.3 5.1E-06 1.8E-10 88.3 15.3 100 246-345 9-151 (540)
187 3hyw_A Sulfide-quinone reducta 98.3 2.4E-07 8.1E-12 96.0 4.7 97 245-345 2-111 (430)
188 2gv8_A Monooxygenase; FMO, FAD 98.3 2.1E-06 7.3E-11 89.3 11.8 100 245-345 6-181 (447)
189 2x3n_A Probable FAD-dependent 98.3 3.3E-06 1.1E-10 86.4 12.2 32 72-103 6-37 (399)
190 2rgh_A Alpha-glycerophosphate 98.3 6.2E-06 2.1E-10 88.4 14.7 59 285-343 187-250 (571)
191 1jnr_A Adenylylsulfate reducta 98.3 9E-06 3.1E-10 88.4 16.2 56 289-344 154-219 (643)
192 3cty_A Thioredoxin reductase; 98.3 4.9E-06 1.7E-10 82.2 12.7 98 246-346 17-129 (319)
193 3atr_A Conserved archaeal prot 98.3 1.4E-06 4.8E-11 90.8 9.0 34 70-103 4-37 (453)
194 1trb_A Thioredoxin reductase; 98.3 4E-06 1.4E-10 82.8 11.6 98 246-346 6-119 (320)
195 1yvv_A Amine oxidase, flavin-c 98.3 7E-06 2.4E-10 81.6 13.4 99 246-346 3-165 (336)
196 3h8l_A NADH oxidase; membrane 98.3 4.4E-07 1.5E-11 93.3 4.7 97 246-346 2-116 (409)
197 2vou_A 2,6-dihydroxypyridine h 98.3 4E-06 1.4E-10 85.7 11.9 100 245-345 5-155 (397)
198 1q1r_A Putidaredoxin reductase 98.3 1.7E-06 5.8E-11 89.6 9.1 100 245-347 4-118 (431)
199 3ihg_A RDME; flavoenzyme, anth 98.3 8.6E-06 2.9E-10 86.8 14.7 33 71-103 4-36 (535)
200 3r9u_A Thioredoxin reductase; 98.3 4.9E-06 1.7E-10 81.8 11.9 98 246-346 5-121 (315)
201 2xdo_A TETX2 protein; tetracyc 98.3 4.8E-06 1.7E-10 85.1 12.3 34 70-103 24-57 (398)
202 2xve_A Flavin-containing monoo 98.3 3.9E-06 1.3E-10 87.7 11.7 101 246-346 3-171 (464)
203 3ef6_A Toluene 1,2-dioxygenase 98.3 3.2E-06 1.1E-10 86.9 10.8 97 246-346 3-114 (410)
204 3h28_A Sulfide-quinone reducta 98.3 6.6E-07 2.3E-11 92.7 5.7 98 245-346 2-112 (430)
205 2dkh_A 3-hydroxybenzoate hydro 98.2 1.7E-05 5.9E-10 86.2 16.9 57 287-343 142-211 (639)
206 1hyu_A AHPF, alkyl hydroperoxi 98.2 5.5E-06 1.9E-10 87.8 12.7 102 245-346 212-329 (521)
207 2r0c_A REBC; flavin adenine di 98.2 1.2E-05 4.2E-10 85.8 15.1 54 287-344 139-197 (549)
208 2a87_A TRXR, TR, thioredoxin r 98.2 4.8E-06 1.6E-10 83.0 11.2 99 245-346 14-129 (335)
209 3vrd_B FCCB subunit, flavocyto 98.2 1.2E-06 4E-11 89.8 6.8 99 245-347 2-112 (401)
210 3fg2_P Putative rubredoxin red 98.2 1.6E-06 5.3E-11 89.0 7.7 97 246-346 2-113 (404)
211 1xhc_A NADH oxidase /nitrite r 98.2 1.5E-06 5E-11 88.0 7.3 98 245-347 8-117 (367)
212 3uox_A Otemo; baeyer-villiger 98.2 6.6E-06 2.3E-10 87.6 12.5 101 246-346 10-152 (545)
213 4a5l_A Thioredoxin reductase; 98.2 7.9E-06 2.7E-10 80.4 12.3 99 247-347 6-125 (314)
214 3ces_A MNMG, tRNA uridine 5-ca 98.2 1E-05 3.5E-10 86.6 13.8 99 246-345 29-183 (651)
215 1k0i_A P-hydroxybenzoate hydro 98.2 1.3E-05 4.5E-10 81.7 14.0 32 72-103 2-33 (394)
216 3lxd_A FAD-dependent pyridine 98.2 3.5E-06 1.2E-10 86.7 9.5 98 246-346 10-122 (415)
217 4gde_A UDP-galactopyranose mut 98.2 7.2E-07 2.5E-11 94.5 4.0 53 286-341 222-274 (513)
218 3g5s_A Methylenetetrahydrofola 98.2 2.4E-06 8.3E-11 85.1 6.8 32 72-103 1-32 (443)
219 3kd9_A Coenzyme A disulfide re 98.1 3.6E-06 1.2E-10 87.6 8.2 98 246-346 4-117 (449)
220 2bcg_G Secretory pathway GDP d 98.1 1.9E-06 6.5E-11 89.8 6.0 59 285-344 241-301 (453)
221 1k0i_A P-hydroxybenzoate hydro 98.1 9.1E-06 3.1E-10 82.9 11.0 100 246-345 3-165 (394)
222 2zxi_A TRNA uridine 5-carboxym 98.1 1.9E-05 6.5E-10 84.2 13.5 99 246-345 28-182 (637)
223 1v0j_A UDP-galactopyranose mut 98.1 1.7E-06 5.9E-11 88.5 5.3 46 68-122 3-49 (399)
224 3cp8_A TRNA uridine 5-carboxym 98.1 2.2E-05 7.6E-10 83.9 13.7 99 245-344 21-175 (641)
225 3oc4_A Oxidoreductase, pyridin 98.1 3.7E-06 1.3E-10 87.6 7.3 100 246-346 3-118 (452)
226 2vou_A 2,6-dihydroxypyridine h 98.1 6.8E-06 2.3E-10 84.0 9.2 32 72-103 5-36 (397)
227 4gcm_A TRXR, thioredoxin reduc 98.1 2.5E-05 8.7E-10 76.8 12.9 98 247-347 8-120 (312)
228 3atr_A Conserved archaeal prot 98.1 2E-05 6.9E-10 82.0 12.5 100 246-345 7-164 (453)
229 4hb9_A Similarities with proba 98.1 2.5E-05 8.6E-10 79.8 13.0 99 247-345 3-168 (412)
230 2gqw_A Ferredoxin reductase; f 98.1 7E-06 2.4E-10 84.3 8.3 99 245-346 7-116 (408)
231 2xdo_A TETX2 protein; tetracyc 98.0 1.8E-05 6.2E-10 80.8 11.2 100 245-345 26-184 (398)
232 1w4x_A Phenylacetone monooxyge 98.0 3.5E-05 1.2E-09 82.1 13.6 97 246-342 17-153 (542)
233 2e1m_A L-glutamate oxidase; L- 98.0 4E-06 1.4E-10 84.4 5.6 43 70-121 42-85 (376)
234 3ics_A Coenzyme A-disulfide re 98.0 9.7E-06 3.3E-10 87.4 9.0 101 245-346 36-155 (588)
235 3ihg_A RDME; flavoenzyme, anth 98.0 2.9E-05 1E-09 82.6 12.4 97 246-343 6-183 (535)
236 2b9w_A Putative aminooxidase; 98.0 5.1E-06 1.8E-10 85.6 6.1 55 287-343 204-258 (424)
237 3hdq_A UDP-galactopyranose mut 98.0 5.1E-06 1.8E-10 84.4 5.7 43 70-121 27-69 (397)
238 1yvv_A Amine oxidase, flavin-c 98.0 5.1E-06 1.7E-10 82.6 5.6 32 72-103 2-33 (336)
239 3ntd_A FAD-dependent pyridine 98.0 9.2E-06 3.2E-10 87.1 7.9 101 246-347 2-121 (565)
240 3s5w_A L-ornithine 5-monooxyge 98.0 1.1E-05 3.9E-10 84.1 8.1 100 247-346 32-195 (463)
241 3iwa_A FAD-dependent pyridine 98.0 1.2E-05 4.2E-10 84.1 8.3 100 246-346 4-128 (472)
242 1c0p_A D-amino acid oxidase; a 97.9 7.4E-06 2.5E-10 82.6 5.7 35 69-103 3-37 (363)
243 2cdu_A NADPH oxidase; flavoenz 97.9 1.2E-05 4.2E-10 83.6 7.4 99 247-346 2-120 (452)
244 1rsg_A FMS1 protein; FAD bindi 97.9 5.6E-06 1.9E-10 87.8 4.7 40 72-120 8-48 (516)
245 1nhp_A NADH peroxidase; oxidor 97.9 1.6E-05 5.6E-10 82.5 8.2 99 247-346 2-118 (447)
246 2bc0_A NADH oxidase; flavoprot 97.9 8.6E-06 3E-10 85.7 5.9 101 245-346 35-152 (490)
247 4g6h_A Rotenone-insensitive NA 97.9 1.6E-05 5.4E-10 83.8 7.7 100 246-347 43-173 (502)
248 3ihm_A Styrene monooxygenase A 97.9 1.2E-05 4E-10 83.2 6.5 54 72-131 22-75 (430)
249 1pn0_A Phenol 2-monooxygenase; 97.9 0.00025 8.6E-09 77.3 17.2 32 72-103 8-44 (665)
250 2jae_A L-amino acid oxidase; o 97.9 9.9E-06 3.4E-10 85.2 5.9 53 287-342 240-295 (489)
251 2yg5_A Putrescine oxidase; oxi 97.9 6.8E-06 2.3E-10 85.5 4.6 41 72-121 5-45 (453)
252 2ivd_A PPO, PPOX, protoporphyr 97.9 8.4E-06 2.9E-10 85.4 5.2 52 287-342 239-293 (478)
253 1i8t_A UDP-galactopyranose mut 97.9 8.3E-06 2.8E-10 82.4 4.8 42 72-122 1-42 (367)
254 1sez_A Protoporphyrinogen oxid 97.9 9.2E-06 3.2E-10 85.8 5.3 43 69-120 10-52 (504)
255 2vdc_G Glutamate synthase [NAD 97.9 1.1E-05 3.9E-10 83.8 5.9 89 244-342 121-218 (456)
256 1d5t_A Guanine nucleotide diss 97.9 1.3E-05 4.5E-10 82.9 6.1 59 285-344 233-291 (433)
257 3cgb_A Pyridine nucleotide-dis 97.9 2.7E-05 9.1E-10 81.7 8.5 100 246-346 37-155 (480)
258 3l8k_A Dihydrolipoyl dehydroge 97.8 5.6E-05 1.9E-09 78.9 10.2 97 247-347 6-148 (466)
259 1m6i_A Programmed cell death p 97.8 2E-05 6.9E-10 82.9 6.7 97 246-345 12-146 (493)
260 3pl8_A Pyranose 2-oxidase; sub 97.8 1.3E-05 4.6E-10 86.5 5.3 60 297-356 271-337 (623)
261 4eqs_A Coenzyme A disulfide re 97.8 2.5E-05 8.6E-10 80.8 7.1 100 247-347 2-120 (437)
262 2qae_A Lipoamide, dihydrolipoy 97.8 9E-05 3.1E-09 77.4 11.2 97 246-346 3-151 (468)
263 2bi7_A UDP-galactopyranose mut 97.7 2.1E-05 7E-10 80.0 5.3 41 72-121 3-43 (384)
264 3lov_A Protoporphyrinogen oxid 97.7 1.8E-05 6E-10 82.9 4.8 40 301-342 249-288 (475)
265 1zk7_A HGII, reductase, mercur 97.7 0.00012 4.2E-09 76.4 11.1 98 245-346 4-153 (467)
266 1zmd_A Dihydrolipoyl dehydroge 97.7 8.1E-05 2.8E-09 77.9 9.7 97 246-346 7-155 (474)
267 4dsg_A UDP-galactopyranose mut 97.7 2.6E-05 8.9E-10 81.9 5.8 42 71-121 8-50 (484)
268 1dxl_A Dihydrolipoamide dehydr 97.7 4.7E-05 1.6E-09 79.6 7.6 97 246-346 7-154 (470)
269 1ebd_A E3BD, dihydrolipoamide 97.7 7.5E-05 2.6E-09 77.7 9.1 96 246-346 4-148 (455)
270 1ojt_A Surface protein; redox- 97.7 6.4E-05 2.2E-09 78.9 8.4 97 246-346 7-163 (482)
271 1v59_A Dihydrolipoamide dehydr 97.7 5.5E-05 1.9E-09 79.2 7.7 95 246-344 6-158 (478)
272 1y56_A Hypothetical protein PH 97.7 4.1E-05 1.4E-09 80.5 6.6 98 246-346 109-222 (493)
273 2hqm_A GR, grase, glutathione 97.7 0.00025 8.7E-09 74.2 12.5 97 246-346 12-163 (479)
274 2iid_A L-amino-acid oxidase; f 97.7 2.8E-05 9.4E-10 82.0 5.1 41 71-120 32-72 (498)
275 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00015 5.1E-09 75.7 10.6 95 247-346 5-149 (464)
276 1cjc_A Protein (adrenodoxin re 97.6 2.5E-05 8.7E-10 81.3 4.4 90 244-343 5-106 (460)
277 3urh_A Dihydrolipoyl dehydroge 97.6 0.00022 7.6E-09 74.9 11.7 95 246-344 26-171 (491)
278 2aqj_A Tryptophan halogenase, 97.6 0.00035 1.2E-08 74.3 13.0 55 290-345 169-224 (538)
279 2yqu_A 2-oxoglutarate dehydrog 97.6 8E-05 2.7E-09 77.5 7.7 95 247-346 3-144 (455)
280 1lvl_A Dihydrolipoamide dehydr 97.6 0.0001 3.4E-09 76.8 8.4 95 73-225 172-272 (458)
281 1xdi_A RV3303C-LPDA; reductase 97.6 0.0001 3.5E-09 77.6 8.5 99 246-346 3-159 (499)
282 2v3a_A Rubredoxin reductase; a 97.6 7.9E-05 2.7E-09 75.7 7.3 97 246-346 5-116 (384)
283 3jsk_A Cypbp37 protein; octame 97.6 0.00036 1.2E-08 68.9 10.9 158 246-404 80-331 (344)
284 1b37_A Protein (polyamine oxid 97.5 5.6E-05 1.9E-09 79.1 5.3 55 287-342 207-269 (472)
285 1ges_A Glutathione reductase; 97.5 0.00045 1.5E-08 71.6 11.7 94 246-347 5-147 (450)
286 1lqt_A FPRA; NADP+ derivative, 97.5 4.1E-05 1.4E-09 79.6 3.6 91 245-345 3-111 (456)
287 1mo9_A ORF3; nucleotide bindin 97.5 0.00031 1E-08 74.4 10.5 96 246-347 44-190 (523)
288 4hb9_A Similarities with proba 97.5 5.8E-05 2E-09 77.0 4.7 31 73-103 2-32 (412)
289 3qfa_A Thioredoxin reductase 1 97.5 0.00022 7.5E-09 75.5 8.7 98 246-347 33-189 (519)
290 1gte_A Dihydropyrimidine dehyd 97.5 5.4E-05 1.9E-09 86.7 4.2 93 245-345 187-290 (1025)
291 2r9z_A Glutathione amide reduc 97.5 0.00034 1.2E-08 72.9 9.8 93 246-346 5-145 (463)
292 2eq6_A Pyruvate dehydrogenase 97.5 0.00027 9.3E-09 73.6 9.0 93 246-346 7-146 (464)
293 3o0h_A Glutathione reductase; 97.4 0.00032 1.1E-08 73.5 9.5 92 246-344 27-167 (484)
294 3lad_A Dihydrolipoamide dehydr 97.4 0.00031 1.1E-08 73.5 9.2 96 246-345 4-156 (476)
295 3g3e_A D-amino-acid oxidase; F 97.4 6.5E-05 2.2E-09 75.2 3.8 48 285-345 141-188 (351)
296 2z3y_A Lysine-specific histone 97.4 0.00012 4E-09 79.9 6.0 42 70-120 105-146 (662)
297 1onf_A GR, grase, glutathione 97.4 0.00059 2E-08 71.8 10.9 94 73-224 177-278 (500)
298 3c4a_A Probable tryptophan hyd 97.4 0.00012 4.1E-09 74.2 5.1 31 73-103 1-33 (381)
299 2e5v_A L-aspartate oxidase; ar 97.4 0.00069 2.4E-08 70.7 11.0 98 247-345 1-178 (472)
300 1fec_A Trypanothione reductase 97.4 0.0006 2.1E-08 71.5 10.5 97 246-346 4-166 (490)
301 4dna_A Probable glutathione re 97.4 0.0003 1E-08 73.3 8.0 94 246-346 6-149 (463)
302 2gag_A Heterotetrameric sarcos 97.4 0.00042 1.4E-08 78.8 9.6 100 246-346 129-256 (965)
303 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00024 8.3E-09 77.6 7.4 87 245-347 373-471 (671)
304 2xag_A Lysine-specific histone 97.3 0.00016 5.4E-09 80.5 6.0 34 70-103 276-309 (852)
305 3dk9_A Grase, GR, glutathione 97.3 0.00021 7.3E-09 74.7 6.5 95 246-346 21-163 (478)
306 2wpf_A Trypanothione reductase 97.3 0.00064 2.2E-08 71.4 9.7 94 73-224 192-295 (495)
307 4b1b_A TRXR, thioredoxin reduc 97.3 0.001 3.4E-08 70.5 10.9 93 73-224 224-322 (542)
308 3dgh_A TRXR-1, thioredoxin red 97.3 0.0016 5.6E-08 68.1 12.4 98 246-347 10-166 (483)
309 3k30_A Histamine dehydrogenase 97.3 0.00013 4.5E-09 80.0 4.1 87 245-344 391-489 (690)
310 3dgz_A Thioredoxin reductase 2 97.2 0.0012 4.1E-08 69.2 10.9 97 246-346 7-162 (488)
311 2x8g_A Thioredoxin glutathione 97.1 0.0021 7.2E-08 69.2 12.0 99 245-347 107-265 (598)
312 1kf6_A Fumarate reductase flav 97.1 0.0017 5.9E-08 69.7 11.0 97 247-343 7-197 (602)
313 1kdg_A CDH, cellobiose dehydro 97.1 0.0003 1E-08 74.9 4.7 57 291-347 201-265 (546)
314 1o94_A Tmadh, trimethylamine d 97.1 0.00018 6.2E-09 79.3 2.8 87 245-344 389-492 (729)
315 3ic9_A Dihydrolipoamide dehydr 97.0 0.0018 6.1E-08 67.9 9.9 30 73-102 175-204 (492)
316 3t37_A Probable dehydrogenase; 97.0 0.00035 1.2E-08 74.0 4.0 51 297-347 222-275 (526)
317 1ju2_A HydroxynitrIle lyase; f 97.0 0.00031 1E-08 74.6 3.1 32 71-103 25-56 (536)
318 3q9t_A Choline dehydrogenase a 96.9 0.00049 1.7E-08 73.4 4.4 33 71-103 5-38 (577)
319 3c4a_A Probable tryptophan hyd 96.9 0.00044 1.5E-08 70.0 3.6 86 247-344 2-144 (381)
320 4gde_A UDP-galactopyranose mut 96.9 0.0024 8.1E-08 67.2 9.3 34 247-280 12-46 (513)
321 1coy_A Cholesterol oxidase; ox 96.7 0.00098 3.3E-08 70.2 4.9 36 68-103 7-42 (507)
322 1vg0_A RAB proteins geranylger 96.7 0.0015 5.3E-08 69.8 6.1 60 285-344 377-438 (650)
323 3qvp_A Glucose oxidase; oxidor 96.7 0.00088 3E-08 71.4 4.0 32 72-103 19-51 (583)
324 1chu_A Protein (L-aspartate ox 96.7 0.004 1.4E-07 66.0 9.0 33 246-279 9-41 (540)
325 3ayj_A Pro-enzyme of L-phenyla 96.7 0.00067 2.3E-08 73.6 3.0 32 72-103 56-95 (721)
326 1n4w_A CHOD, cholesterol oxida 96.5 0.0014 4.8E-08 69.0 4.3 32 72-103 5-36 (504)
327 3fim_B ARYL-alcohol oxidase; A 96.5 0.001 3.4E-08 70.8 3.0 32 72-103 2-34 (566)
328 3pl8_A Pyranose 2-oxidase; sub 96.3 0.008 2.7E-07 64.8 8.8 33 246-278 47-79 (623)
329 1gpe_A Protein (glucose oxidas 96.3 0.0025 8.6E-08 68.3 4.3 33 71-103 23-56 (587)
330 2jbv_A Choline oxidase; alcoho 96.2 0.0026 8.8E-08 67.6 4.0 33 71-103 12-45 (546)
331 4b63_A L-ornithine N5 monooxyg 96.1 0.025 8.5E-07 59.3 10.8 100 247-346 41-217 (501)
332 3kkj_A Amine oxidase, flavin-c 95.4 0.012 4.1E-07 55.3 4.7 34 247-280 4-37 (336)
333 3gyx_A Adenylylsulfate reducta 95.0 0.041 1.4E-06 59.6 8.0 52 292-343 172-233 (662)
334 3fwz_A Inner membrane protein 94.3 0.053 1.8E-06 45.9 5.4 31 72-102 7-37 (140)
335 4dgk_A Phytoene dehydrogenase; 94.2 0.029 9.9E-07 58.6 4.3 35 246-280 2-36 (501)
336 3llv_A Exopolyphosphatase-rela 94.2 0.048 1.6E-06 46.1 4.9 30 73-102 7-36 (141)
337 3dfz_A SIRC, precorrin-2 dehyd 94.1 0.052 1.8E-06 49.9 5.2 75 244-344 30-104 (223)
338 1lss_A TRK system potassium up 94.0 0.048 1.6E-06 45.8 4.5 30 73-102 5-34 (140)
339 3rp8_A Flavoprotein monooxygen 93.8 0.05 1.7E-06 55.1 5.0 36 245-280 23-58 (407)
340 2iid_A L-amino-acid oxidase; f 93.8 0.057 2E-06 56.3 5.5 61 244-304 32-110 (498)
341 2g1u_A Hypothetical protein TM 93.6 0.096 3.3E-06 45.1 5.8 38 242-279 16-53 (155)
342 3ic5_A Putative saccharopine d 93.6 0.062 2.1E-06 43.5 4.3 31 72-102 5-36 (118)
343 3eag_A UDP-N-acetylmuramate:L- 93.6 0.081 2.8E-06 51.9 5.9 78 245-347 4-82 (326)
344 1id1_A Putative potassium chan 93.5 0.08 2.7E-06 45.5 5.1 31 72-102 3-33 (153)
345 2g1u_A Hypothetical protein TM 93.5 0.075 2.6E-06 45.8 4.9 30 73-102 20-49 (155)
346 3c96_A Flavin-containing monoo 93.4 0.068 2.3E-06 54.2 5.1 35 246-280 5-40 (410)
347 3lk7_A UDP-N-acetylmuramoylala 93.4 0.098 3.4E-06 53.9 6.3 80 245-347 9-88 (451)
348 3oz2_A Digeranylgeranylglycero 93.2 0.07 2.4E-06 53.4 4.9 34 247-280 6-39 (397)
349 2bcg_G Secretory pathway GDP d 93.2 0.15 5E-06 52.6 7.3 45 69-122 8-52 (453)
350 3ihm_A Styrene monooxygenase A 93.1 0.076 2.6E-06 54.3 5.1 35 244-278 21-55 (430)
351 1d5t_A Guanine nucleotide diss 93.1 0.096 3.3E-06 53.6 5.7 45 68-121 2-46 (433)
352 2qa2_A CABE, polyketide oxygen 92.9 0.098 3.4E-06 54.7 5.6 56 246-301 13-69 (499)
353 3nix_A Flavoprotein/dehydrogen 92.9 0.068 2.3E-06 54.3 4.3 33 246-278 6-38 (421)
354 3i3l_A Alkylhalidase CMLS; fla 92.6 0.12 4E-06 55.2 5.8 35 245-279 23-57 (591)
355 3hwr_A 2-dehydropantoate 2-red 92.6 0.15 5.3E-06 49.7 6.1 84 239-342 13-97 (318)
356 2qa1_A PGAE, polyketide oxygen 92.5 0.1 3.5E-06 54.5 5.1 35 246-280 12-46 (500)
357 2r0c_A REBC; flavin adenine di 92.4 0.12 4.1E-06 54.7 5.5 35 246-280 27-61 (549)
358 3fwz_A Inner membrane protein 92.4 0.33 1.1E-05 40.8 7.3 51 244-306 6-56 (140)
359 3nrn_A Uncharacterized protein 92.4 0.12 4E-06 52.6 5.2 35 246-280 1-35 (421)
360 2pyx_A Tryptophan halogenase; 92.2 0.12 4E-06 54.5 5.0 34 245-278 7-52 (526)
361 3fmw_A Oxygenase; mithramycin, 92.0 0.13 4.6E-06 54.6 5.3 35 246-280 50-84 (570)
362 2hmt_A YUAA protein; RCK, KTN, 92.0 0.13 4.5E-06 43.1 4.3 30 73-102 7-36 (144)
363 3ka7_A Oxidoreductase; structu 91.9 0.15 5E-06 51.8 5.2 34 247-280 2-35 (425)
364 3fpz_A Thiazole biosynthetic e 91.8 0.1 3.5E-06 51.0 3.9 63 246-308 66-138 (326)
365 4e12_A Diketoreductase; oxidor 91.6 0.17 5.8E-06 48.5 5.0 31 72-102 4-34 (283)
366 1f0y_A HCDH, L-3-hydroxyacyl-C 91.5 0.18 6E-06 48.8 5.1 30 73-102 16-45 (302)
367 3nks_A Protoporphyrinogen oxid 91.5 0.16 5.6E-06 52.4 5.2 35 246-280 3-39 (477)
368 3dme_A Conserved exported prot 91.5 0.16 5.5E-06 50.2 4.9 34 246-279 5-38 (369)
369 3k7m_X 6-hydroxy-L-nicotine ox 91.4 0.16 5.4E-06 51.7 4.9 34 247-280 3-36 (431)
370 3dfz_A SIRC, precorrin-2 dehyd 91.4 0.17 5.9E-06 46.4 4.6 31 72-102 31-61 (223)
371 3v76_A Flavoprotein; structura 91.3 0.16 5.4E-06 51.7 4.7 35 246-280 28-62 (417)
372 2jae_A L-amino acid oxidase; o 91.3 0.21 7.1E-06 51.9 5.8 36 245-280 11-46 (489)
373 2e1m_A L-glutamate oxidase; L- 91.2 0.21 7.2E-06 49.9 5.4 35 245-279 44-79 (376)
374 2oln_A NIKD protein; flavoprot 91.2 0.18 6.2E-06 50.6 5.0 33 247-279 6-38 (397)
375 1ryi_A Glycine oxidase; flavop 91.1 0.18 6E-06 50.3 4.8 33 246-278 18-50 (382)
376 3l4b_C TRKA K+ channel protien 91.0 0.17 5.8E-06 46.3 4.2 29 74-102 2-30 (218)
377 3cgv_A Geranylgeranyl reductas 90.9 0.19 6.6E-06 50.3 4.9 34 247-280 6-39 (397)
378 2b9w_A Putative aminooxidase; 90.8 0.22 7.4E-06 50.6 5.2 60 245-304 6-82 (424)
379 2dkh_A 3-hydroxybenzoate hydro 90.8 0.2 6.7E-06 54.1 5.1 35 246-280 33-68 (639)
380 1kyq_A Met8P, siroheme biosynt 90.8 0.15 5E-06 48.4 3.6 31 72-102 13-43 (274)
381 2e4g_A Tryptophan halogenase; 90.8 0.19 6.5E-06 53.2 4.9 34 245-278 25-61 (550)
382 2uzz_A N-methyl-L-tryptophan o 90.8 0.15 5.1E-06 50.6 3.9 33 247-279 4-36 (372)
383 1t2d_A LDH-P, L-lactate dehydr 90.8 0.21 7.3E-06 48.7 4.9 31 72-102 4-35 (322)
384 3g5s_A Methylenetetrahydrofola 90.8 0.21 7E-06 50.0 4.7 33 246-278 2-34 (443)
385 2ewd_A Lactate dehydrogenase,; 90.8 0.18 6.1E-06 49.2 4.3 34 69-102 1-35 (317)
386 1c0p_A D-amino acid oxidase; a 90.7 0.23 7.9E-06 49.2 5.2 32 246-277 7-38 (363)
387 2gf3_A MSOX, monomeric sarcosi 90.7 0.2 6.8E-06 50.1 4.7 34 246-279 4-37 (389)
388 2bs2_A Quinol-fumarate reducta 90.7 0.2 6.9E-06 54.1 5.0 32 72-103 5-36 (660)
389 3c85_A Putative glutathione-re 90.6 0.21 7E-06 44.2 4.3 30 73-102 40-70 (183)
390 3qj4_A Renalase; FAD/NAD(P)-bi 90.6 0.2 6.8E-06 49.2 4.6 34 246-279 2-38 (342)
391 3ado_A Lambda-crystallin; L-gu 90.4 0.22 7.5E-06 48.4 4.5 30 73-102 7-36 (319)
392 1rsg_A FMS1 protein; FAD bindi 90.4 0.22 7.4E-06 52.2 4.8 34 246-279 9-43 (516)
393 1vg0_A RAB proteins geranylger 90.3 0.73 2.5E-05 49.3 8.8 44 69-121 5-48 (650)
394 4dio_A NAD(P) transhydrogenase 90.3 0.22 7.4E-06 50.0 4.5 30 73-102 191-220 (405)
395 2weu_A Tryptophan 5-halogenase 90.3 0.14 4.7E-06 53.6 3.2 33 246-278 3-38 (511)
396 2x5o_A UDP-N-acetylmuramoylala 90.2 0.17 5.6E-06 52.0 3.6 30 73-102 6-35 (439)
397 1b37_A Protein (polyamine oxid 90.2 0.3 1E-05 50.4 5.7 41 71-120 3-44 (472)
398 1y56_B Sarcosine oxidase; dehy 90.2 0.22 7.4E-06 49.7 4.5 33 246-278 6-38 (382)
399 1pn0_A Phenol 2-monooxygenase; 90.2 0.25 8.7E-06 53.5 5.3 34 247-280 10-48 (665)
400 1s3e_A Amine oxidase [flavin-c 89.9 0.24 8.3E-06 51.8 4.8 59 246-305 5-81 (520)
401 3llv_A Exopolyphosphatase-rela 89.9 0.64 2.2E-05 38.9 6.6 32 246-277 7-38 (141)
402 2bi7_A UDP-galactopyranose mut 89.9 0.32 1.1E-05 48.8 5.4 35 246-280 4-38 (384)
403 3lk7_A UDP-N-acetylmuramoylala 89.9 0.24 8E-06 51.0 4.5 31 72-102 9-39 (451)
404 1bg6_A N-(1-D-carboxylethyl)-L 89.8 0.26 8.8E-06 48.8 4.7 31 72-102 4-34 (359)
405 3nyc_A D-arginine dehydrogenas 89.6 0.25 8.6E-06 49.1 4.4 35 245-280 9-43 (381)
406 3e1t_A Halogenase; flavoprotei 89.5 0.3 1E-05 51.1 5.0 33 246-278 8-40 (512)
407 2a9f_A Putative malic enzyme ( 89.5 0.25 8.6E-06 49.1 4.1 31 72-102 188-219 (398)
408 2ivd_A PPO, PPOX, protoporphyr 89.5 0.29 1E-05 50.5 4.9 36 245-280 16-51 (478)
409 3i6d_A Protoporphyrinogen oxid 89.4 0.18 6E-06 51.9 3.1 35 246-280 6-46 (470)
410 3i83_A 2-dehydropantoate 2-red 89.3 0.3 1E-05 47.7 4.5 30 73-102 3-32 (320)
411 1sez_A Protoporphyrinogen oxid 89.2 0.36 1.2E-05 50.2 5.4 36 245-280 13-48 (504)
412 3hn7_A UDP-N-acetylmuramate-L- 89.1 0.34 1.1E-05 50.9 5.0 81 240-346 14-95 (524)
413 2yg5_A Putrescine oxidase; oxi 89.0 0.33 1.1E-05 49.7 4.9 59 246-305 6-81 (453)
414 3hn2_A 2-dehydropantoate 2-red 88.9 0.32 1.1E-05 47.3 4.4 30 73-102 3-32 (312)
415 3dje_A Fructosyl amine: oxygen 88.9 0.33 1.1E-05 49.4 4.8 34 246-279 7-41 (438)
416 2gag_B Heterotetrameric sarcos 88.8 0.28 9.6E-06 49.3 4.1 33 246-278 22-56 (405)
417 3nlc_A Uncharacterized protein 88.7 0.27 9.1E-06 51.8 3.9 35 245-279 107-141 (549)
418 4hv4_A UDP-N-acetylmuramate--L 88.7 0.41 1.4E-05 49.8 5.3 75 244-346 21-96 (494)
419 3k6j_A Protein F01G10.3, confi 88.6 0.58 2E-05 47.9 6.3 30 73-102 55-84 (460)
420 2ew2_A 2-dehydropantoate 2-red 88.6 0.35 1.2E-05 46.7 4.6 30 73-102 4-33 (316)
421 3p2y_A Alanine dehydrogenase/p 88.6 0.28 9.6E-06 48.8 3.8 30 73-102 185-214 (381)
422 1jnr_A Adenylylsulfate reducta 88.6 0.25 8.5E-06 53.3 3.7 32 72-103 22-57 (643)
423 3hdq_A UDP-galactopyranose mut 88.6 0.39 1.3E-05 48.3 4.9 35 246-280 30-64 (397)
424 3ghy_A Ketopantoate reductase 88.5 0.41 1.4E-05 47.0 5.0 30 73-102 4-33 (335)
425 1lld_A L-lactate dehydrogenase 88.5 0.37 1.3E-05 46.8 4.7 30 73-102 8-39 (319)
426 2i0z_A NAD(FAD)-utilizing dehy 88.5 0.35 1.2E-05 49.6 4.6 34 246-279 27-60 (447)
427 3ps9_A TRNA 5-methylaminomethy 88.4 0.42 1.4E-05 51.9 5.4 34 246-279 273-306 (676)
428 2vvm_A Monoamine oxidase N; FA 88.2 0.41 1.4E-05 49.7 5.0 35 246-280 40-74 (495)
429 3pvc_A TRNA 5-methylaminomethy 88.2 0.42 1.4E-05 52.1 5.2 35 245-279 264-298 (689)
430 3g3e_A D-amino-acid oxidase; F 88.1 0.33 1.1E-05 47.8 3.9 32 247-278 2-39 (351)
431 1pzg_A LDH, lactate dehydrogen 88.0 0.37 1.3E-05 47.3 4.2 30 73-102 10-40 (331)
432 4g65_A TRK system potassium up 87.9 0.23 7.8E-06 51.2 2.7 31 72-102 3-33 (461)
433 2hjr_A Malate dehydrogenase; m 87.8 0.46 1.6E-05 46.5 4.8 30 73-102 15-45 (328)
434 2qcu_A Aerobic glycerol-3-phos 87.8 0.39 1.3E-05 50.1 4.5 32 247-278 5-36 (501)
435 1id1_A Putative potassium chan 87.7 0.66 2.3E-05 39.5 5.3 33 245-277 3-35 (153)
436 3gg2_A Sugar dehydrogenase, UD 87.7 0.44 1.5E-05 48.9 4.7 30 73-102 3-32 (450)
437 3c4n_A Uncharacterized protein 87.6 0.36 1.2E-05 48.8 4.0 33 246-278 37-71 (405)
438 3ego_A Probable 2-dehydropanto 87.6 0.86 2.9E-05 44.0 6.6 75 246-341 3-77 (307)
439 1vl6_A Malate oxidoreductase; 87.5 0.4 1.4E-05 47.6 4.1 31 72-102 192-223 (388)
440 1ez4_A Lactate dehydrogenase; 87.5 0.43 1.5E-05 46.4 4.3 34 69-102 2-37 (318)
441 1y6j_A L-lactate dehydrogenase 87.5 0.51 1.7E-05 45.9 4.8 31 72-102 7-39 (318)
442 2raf_A Putative dinucleotide-b 87.5 0.6 2E-05 42.3 5.0 39 240-278 14-52 (209)
443 1v0j_A UDP-galactopyranose mut 87.4 0.37 1.3E-05 48.6 3.9 35 246-280 8-43 (399)
444 1x13_A NAD(P) transhydrogenase 87.4 0.44 1.5E-05 48.0 4.5 30 73-102 173-202 (401)
445 1i8t_A UDP-galactopyranose mut 87.4 0.46 1.6E-05 47.3 4.5 34 247-280 3-36 (367)
446 1lss_A TRK system potassium up 87.3 0.62 2.1E-05 38.6 4.7 32 246-277 5-36 (140)
447 2v6b_A L-LDH, L-lactate dehydr 87.2 0.5 1.7E-05 45.7 4.6 29 74-102 2-32 (304)
448 2y0c_A BCEC, UDP-glucose dehyd 87.2 0.48 1.6E-05 49.0 4.7 30 73-102 9-38 (478)
449 3qha_A Putative oxidoreductase 87.1 0.44 1.5E-05 45.8 4.1 34 69-102 12-45 (296)
450 3eag_A UDP-N-acetylmuramate:L- 87.1 0.52 1.8E-05 46.1 4.6 30 73-102 5-35 (326)
451 1ur5_A Malate dehydrogenase; o 87.0 0.53 1.8E-05 45.6 4.7 30 73-102 3-33 (309)
452 3ado_A Lambda-crystallin; L-gu 86.9 0.39 1.3E-05 46.7 3.6 35 245-279 6-40 (319)
453 2rgh_A Alpha-glycerophosphate 86.8 0.47 1.6E-05 50.4 4.5 33 246-278 33-65 (571)
454 3ic5_A Putative saccharopine d 86.8 0.55 1.9E-05 37.6 4.0 33 245-277 5-38 (118)
455 3tl2_A Malate dehydrogenase; c 86.8 0.63 2.2E-05 45.1 5.0 31 72-102 8-39 (315)
456 2z3y_A Lysine-specific histone 86.8 0.65 2.2E-05 50.2 5.6 37 244-280 106-142 (662)
457 3g17_A Similar to 2-dehydropan 86.7 0.39 1.3E-05 46.2 3.5 30 73-102 3-32 (294)
458 2dpo_A L-gulonate 3-dehydrogen 86.7 0.56 1.9E-05 45.7 4.6 30 73-102 7-36 (319)
459 4ffl_A PYLC; amino acid, biosy 86.6 0.55 1.9E-05 46.5 4.6 30 73-102 2-31 (363)
460 1y0p_A Fumarate reductase flav 86.5 0.51 1.7E-05 50.1 4.6 35 246-280 127-161 (571)
461 1jw9_B Molybdopterin biosynthe 86.4 0.47 1.6E-05 44.4 3.8 30 73-102 32-62 (249)
462 2xag_A Lysine-specific histone 86.4 0.69 2.4E-05 51.4 5.6 36 244-279 277-312 (852)
463 3doj_A AT3G25530, dehydrogenas 86.3 0.68 2.3E-05 44.8 5.0 32 71-102 20-51 (310)
464 1l7d_A Nicotinamide nucleotide 86.3 0.55 1.9E-05 47.0 4.5 30 73-102 173-202 (384)
465 3g79_A NDP-N-acetyl-D-galactos 86.2 0.51 1.7E-05 48.7 4.2 31 72-102 18-50 (478)
466 3hwr_A 2-dehydropantoate 2-red 86.1 0.61 2.1E-05 45.4 4.6 30 72-101 19-48 (318)
467 3k96_A Glycerol-3-phosphate de 86.1 0.66 2.3E-05 45.9 4.9 31 72-102 29-59 (356)
468 2q3e_A UDP-glucose 6-dehydroge 86.1 0.49 1.7E-05 48.8 4.0 34 69-102 2-37 (467)
469 2raf_A Putative dinucleotide-b 86.0 0.68 2.3E-05 42.0 4.6 31 72-102 19-49 (209)
470 1ks9_A KPA reductase;, 2-dehyd 85.9 0.64 2.2E-05 44.3 4.6 29 74-102 2-30 (291)
471 3da1_A Glycerol-3-phosphate de 85.9 0.67 2.3E-05 49.0 5.1 33 246-278 19-51 (561)
472 1pjc_A Protein (L-alanine dehy 85.9 0.6 2.1E-05 46.3 4.4 30 73-102 168-197 (361)
473 3lov_A Protoporphyrinogen oxid 85.9 0.72 2.4E-05 47.5 5.2 41 72-121 4-46 (475)
474 3axb_A Putative oxidoreductase 85.8 0.44 1.5E-05 48.7 3.6 31 246-276 24-55 (448)
475 3vtf_A UDP-glucose 6-dehydroge 85.7 0.57 1.9E-05 47.6 4.2 31 72-102 21-51 (444)
476 3cky_A 2-hydroxymethyl glutara 85.4 0.66 2.3E-05 44.5 4.4 32 71-102 3-34 (301)
477 1qo8_A Flavocytochrome C3 fuma 85.3 0.57 1.9E-05 49.6 4.2 35 246-280 122-156 (566)
478 3l9w_A Glutathione-regulated p 85.2 0.76 2.6E-05 46.5 4.9 30 73-102 5-34 (413)
479 3ego_A Probable 2-dehydropanto 85.2 0.7 2.4E-05 44.7 4.5 29 73-102 3-31 (307)
480 2gjc_A Thiazole biosynthetic e 85.0 0.61 2.1E-05 45.5 3.8 157 247-404 67-321 (326)
481 4dsg_A UDP-galactopyranose mut 84.9 0.8 2.7E-05 47.4 5.0 36 245-280 9-45 (484)
482 2hmt_A YUAA protein; RCK, KTN, 84.9 0.7 2.4E-05 38.4 3.8 33 245-277 6-38 (144)
483 3dhn_A NAD-dependent epimerase 84.9 0.67 2.3E-05 42.2 4.0 32 71-102 3-35 (227)
484 3gvi_A Malate dehydrogenase; N 84.9 0.83 2.8E-05 44.5 4.8 31 72-102 7-38 (324)
485 4e12_A Diketoreductase; oxidor 84.8 0.65 2.2E-05 44.3 3.9 34 246-279 5-38 (283)
486 3pqe_A L-LDH, L-lactate dehydr 84.7 0.74 2.5E-05 44.9 4.3 31 72-102 5-37 (326)
487 4e21_A 6-phosphogluconate dehy 84.7 0.8 2.7E-05 45.3 4.7 34 69-102 19-52 (358)
488 4at0_A 3-ketosteroid-delta4-5a 84.6 0.8 2.7E-05 47.8 4.9 34 247-280 43-76 (510)
489 3oj0_A Glutr, glutamyl-tRNA re 84.6 0.38 1.3E-05 40.6 1.9 30 73-102 22-51 (144)
490 1kyq_A Met8P, siroheme biosynt 84.5 0.87 3E-05 43.1 4.6 35 244-278 12-46 (274)
491 1zcj_A Peroxisomal bifunctiona 84.3 0.89 3E-05 46.8 5.0 30 73-102 38-67 (463)
492 1z82_A Glycerol-3-phosphate de 84.3 0.84 2.9E-05 44.7 4.7 31 72-102 14-44 (335)
493 3l4b_C TRKA K+ channel protien 84.0 2.2 7.5E-05 38.6 7.1 31 247-277 2-32 (218)
494 1y7t_A Malate dehydrogenase; N 84.0 0.69 2.4E-05 45.2 3.9 33 70-102 2-42 (327)
495 3p7m_A Malate dehydrogenase; p 83.9 1 3.4E-05 43.9 4.9 31 72-102 5-36 (321)
496 1pjq_A CYSG, siroheme synthase 83.8 0.81 2.8E-05 47.0 4.4 30 73-102 13-42 (457)
497 3pid_A UDP-glucose 6-dehydroge 83.8 0.84 2.9E-05 46.3 4.4 30 72-102 36-65 (432)
498 2qrj_A Saccharopine dehydrogen 83.8 0.95 3.3E-05 45.0 4.7 30 73-102 215-248 (394)
499 1mv8_A GMD, GDP-mannose 6-dehy 83.8 0.78 2.7E-05 46.8 4.3 29 74-102 2-30 (436)
500 2gmh_A Electron transfer flavo 83.8 0.67 2.3E-05 49.3 3.9 35 246-280 36-76 (584)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2.8e-78 Score=643.43 Aligned_cols=452 Identities=35% Similarity=0.611 Sum_probs=377.9
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhh-hccCCCcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFD-ESNGFGWK 150 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~-~~~~~g~~ 150 (551)
+|||+|||||+||+.||.++++.|.+|+|||+.... ....++.+||+|+|+||+|+|.|+.+++..+..+ +...||+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~-~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~ 120 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPS-SQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWK 120 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCC-TTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccc-cccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcc
Confidence 599999999999999999999999999999931100 0112456999999999999999999998887776 56678887
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE-------cCEEEEeCeEEEcCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV-------DGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v-------~g~~~~~d~lviAtG~~p~~ 223 (551)
.. ...+||..++.+.+..++++...+...+++.+|+++.+.+.+++++++.+ +++.+.+|++|||||++|..
T Consensus 121 ~~-~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~ 199 (542)
T 4b1b_A 121 FD-NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHI 199 (542)
T ss_dssp EE-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECC
T ss_pred cC-cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCC
Confidence 64 46789999999999999999888888999999999999999999999887 34679999999999999999
Q ss_pred CCCCCC--CceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCc
Q 008841 224 PDIPGS--EYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGI 301 (551)
Q Consensus 224 p~i~g~--~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv 301 (551)
|+.++. +.+++++++++++++|++++|||+|++|+|+|..|+++|.+||++.+ +.+++.+|+++++.+.+.|+++||
T Consensus 200 P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi 278 (542)
T 4b1b_A 200 PDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGV 278 (542)
T ss_dssp CSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccccchhHHHHHHHHHHhhcc
Confidence 875543 35789999999999999999999999999999999999999999987 567889999999999999999999
Q ss_pred EEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCe-EeCCCCCCCCCcEEEeC
Q 008841 302 EFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAI-EVDEYSGTAVPSIWAVG 380 (551)
Q Consensus 302 ~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i-~vd~~~~t~~~~vya~G 380 (551)
++++++.+++++..+++ +.|.+.+++++.+|.|++|+|++||++.|+++..++.++.+|++ .+|+++||++|||||+|
T Consensus 279 ~~~~~~~v~~~~~~~~~-~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiG 357 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDK-ILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVG 357 (542)
T ss_dssp EEEETCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECT
T ss_pred eeecceEEEEEEecCCe-EEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEec
Confidence 99999999999987766 78889999899999999999999999999999999999877665 78899999999999999
Q ss_pred cCCCC-CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCC--CeEEEEeeccCcccc-
Q 008841 381 DVTDR-INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKAT- 456 (551)
Q Consensus 381 D~~~~-~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~--~~~~~~~~~~~~~~~- 456 (551)
||++. +.+++.|.+||+++++|++|......+|..+|+++|++|++++||+||+||++++. ++.++...+.....+
T Consensus 358 Dv~~~~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~~~ 437 (542)
T 4b1b_A 358 DVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISA 437 (542)
T ss_dssp TSBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEEC---------
T ss_pred cccCCchhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccchhhhh
Confidence 99976 68999999999999999999887778999999999999999999999999998864 455555444333221
Q ss_pred --------------cccCCCcEEEEEEE-ECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHH
Q 008841 457 --------------LSGLPDRIFMKLVL-CAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEF 521 (551)
Q Consensus 457 --------------~~~~~~~~~~kl~~-~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~ 521 (551)
.....+.+|+|+++ ++++++|||+|++|++|+|+|+.+++||++++|++||.+++|+|||++|+|
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i~~HPTlsE~l 517 (542)
T 4b1b_A 438 VHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESF 517 (542)
T ss_dssp --------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC-----------
T ss_pred hhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccCCcCCCHHHHH
Confidence 12245678999996 567899999999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 008841 522 VTLRTP 527 (551)
Q Consensus 522 ~~~~~~ 527 (551)
.++...
T Consensus 518 ~~~~~t 523 (542)
T 4b1b_A 518 MNLFVT 523 (542)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 886443
No 2
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.3e-75 Score=614.48 Aligned_cols=446 Identities=48% Similarity=0.818 Sum_probs=417.6
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||+|||||++|+++|+.|++.|++|+||| +..+||+|.+.||+|++.++..++....+.+...|++..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liE----------k~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~ 74 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAE----------EFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTV 74 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEe----------CCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 6999999999999999999999999999999 677999999999999999999999999999999998876
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE--cCEEEEeCeEEEcCCCCCC-CCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV--DGKLYSARHILISVGGRPF-IPDIPG 228 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v--~g~~~~~d~lviAtG~~p~-~p~i~g 228 (551)
. .+.++|..+..+.......+...+...+.+.+++++.+++.+++++.+.+ +++.+.||++|+|||++|. .|++||
T Consensus 75 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G 153 (463)
T 4dna_A 75 G-ESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPG 153 (463)
T ss_dssp C-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTT
T ss_pred C-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCC
Confidence 4 45789999999998888888888888888889999999999999999999 7889999999999999999 999999
Q ss_pred CCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcc
Q 008841 229 SEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEES 308 (551)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 308 (551)
.+.++++++++.+...+++++|||+|++|+|+|..+.++|.+|+++++.+.+++.+++++.+.+.+.+++.||++++++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 233 (463)
T 4dna_A 154 HELCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDI 233 (463)
T ss_dssp GGGCBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred ccccccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCE
Confidence 98899999999998899999999999999999999999999999999999999889999999999999999999999999
Q ss_pred cEEEEEcCCceEEEE-ECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCCCC
Q 008841 309 PQAILKSTDGSLSVK-TNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRIN 387 (551)
Q Consensus 309 v~~i~~~~~~~~~V~-~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~~~ 387 (551)
|++++.++++.+.|. +.+|+ +++|.||+|+|++|++.+++++..|++++++|+|.||+++||++|+|||+|||++.++
T Consensus 234 v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~ 312 (463)
T 4dna_A 234 IQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDRVQ 312 (463)
T ss_dssp EEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGSSCC
T ss_pred EEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCCCCC
Confidence 999998766546788 88998 9999999999999999988888999999999999999999999999999999999999
Q ss_pred ChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcccccccCCCcEEEE
Q 008841 388 LTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMK 467 (551)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 467 (551)
+++.|..||+++|+||+|......++..+|+++|++|+++++|++|+||++++.++.++..+|..+.+++..+.+.+|+|
T Consensus 313 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 392 (463)
T 4dna_A 313 LTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTIMK 392 (463)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHSSEEEEEEEEECCTTHHHHCCCCCEEEE
T ss_pred ChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcCCCeEEEEEeccccchhhcCCCceEEEE
Confidence 99999999999999999877666788899999999999999999999999998788888888888888887888899999
Q ss_pred EEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHhhhh
Q 008841 468 LVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTR 529 (551)
Q Consensus 468 l~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~~~ 529 (551)
+++|+++|+|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++....+
T Consensus 393 ~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~ 454 (463)
T 4dna_A 393 LVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMYQPSY 454 (463)
T ss_dssp EEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGTCCCSCSE
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999888775544
No 3
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=6.4e-74 Score=609.78 Aligned_cols=460 Identities=42% Similarity=0.727 Sum_probs=414.7
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHh-CCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccC
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAAN-FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNG 146 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~ 146 (551)
+|+.+|||+|||||+||+++|.+|++ .|++|+|||++... ...++..+||+|.+.||+|+|.++..+++.+.+.+...
T Consensus 3 ~M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~-~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~ 81 (495)
T 2wpf_A 3 HMSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSH-GPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAG 81 (495)
T ss_dssp CCCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSS-BTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcccccCEEEECCChhHHHHHHHHHHhcCCeEEEEeccccc-ccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHh
Confidence 46567999999999999999999999 99999999932111 22335678999999999999999999988888888888
Q ss_pred CCcccCCCC--CCChHHHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEeEEEEecCCEEEEc---------CEEEEeCeEE
Q 008841 147 FGWKYGTEP--QHDWSTLIANKNAELQRLTGIYKNILINA-GITLIEGRGKIVDPHTVDVD---------GKLYSARHIL 214 (551)
Q Consensus 147 ~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~i~~~~v~v~---------g~~~~~d~lv 214 (551)
||+... .+ .++|..+..+..+.++++...+...+++. +|+++.+++.+++++++.++ ++.+.||+||
T Consensus 82 ~g~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 82 FGWEFD-GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHIL 160 (495)
T ss_dssp TTEECC-GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEE
T ss_pred cCcccC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEE
Confidence 888643 23 67999999999988888888888888888 99999999999999999884 6789999999
Q ss_pred EcCCCCCCCCCCCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhC---CCeEEEEeecCccCCCCCHHHHHH
Q 008841 215 ISVGGRPFIPDIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGL---TSEVHVFIRQKKVLRGFDEDIRDF 291 (551)
Q Consensus 215 iAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~---g~~Vtlv~~~~~~l~~~~~~~~~~ 291 (551)
||||++|..|++||.+.++++++++.+...+++++|||+|++|+|+|..|+++ |.+|+++++.+++++.+++++.+.
T Consensus 161 iATGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~ 240 (495)
T 2wpf_A 161 LATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREE 240 (495)
T ss_dssp ECCCEEECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHH
T ss_pred EeCCCCcCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHH
Confidence 99999999999999888889999999888899999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCC
Q 008841 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGT 371 (551)
Q Consensus 292 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t 371 (551)
+.+.|+++||+++++++|++++.++++.+.|.+.+|+++++|.||+|+|++|+++.|.++.++++++++|+|.||+++||
T Consensus 241 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t 320 (495)
T 2wpf_A 241 VTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT 320 (495)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCcc
Confidence 99999999999999999999988654447788999989999999999999999986667889999998999999999999
Q ss_pred CCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeecc
Q 008841 372 AVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFR 451 (551)
Q Consensus 372 ~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~ 451 (551)
+.|+|||+|||++.+++++.|..||+++|.||+|......+|..+|+++|++|+++++|++|++|++.+.++.+...+|.
T Consensus 321 ~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~v~~~~~~ 400 (495)
T 2wpf_A 321 NVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFT 400 (495)
T ss_dssp SSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHHHHHHSSEEEEEEEEEC
T ss_pred CCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEEecC
Confidence 99999999999998889999999999999999987655678889999999999999999999999988767888888888
Q ss_pred CcccccccCCCcEE-EEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHhhhh
Q 008841 452 PLKATLSGLPDRIF-MKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTR 529 (551)
Q Consensus 452 ~~~~~~~~~~~~~~-~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~~~ 529 (551)
+..+++....+.+| +|+++|+++|+|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++....+
T Consensus 401 ~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~ 479 (495)
T 2wpf_A 401 PLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSY 479 (495)
T ss_dssp CTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCSCSE
T ss_pred chhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHHhh
Confidence 88887777778899 9999999999999999999999999999999999999999999999999999999876554333
No 4
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.3e-73 Score=607.12 Aligned_cols=448 Identities=45% Similarity=0.790 Sum_probs=415.2
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.+|||+|||||++|+++|++|++.|++|+||| +..+||+|.+.||+|++.++..++....+.....||+.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liE----------k~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~ 94 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAE----------EYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWK 94 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEe----------CCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcc
Confidence 36999999999999999999999999999999 67799999999999999999999999999999999887
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE--cCEEEEeCeEEEcCCCCCC-CCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV--DGKLYSARHILISVGGRPF-IPDIP 227 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v--~g~~~~~d~lviAtG~~p~-~p~i~ 227 (551)
.. .+.++|..+..+.......+...+...+.+.+++++.+.+.+++++.+.+ +++.+.||++|+|||++|. .|++|
T Consensus 95 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~ 173 (484)
T 3o0h_A 95 YA-DPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIK 173 (484)
T ss_dssp CC-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CB
T ss_pred cC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCC
Confidence 54 45789999999998888888888888889999999999999999999999 7789999999999999999 99999
Q ss_pred CCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 008841 228 GSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEE 307 (551)
Q Consensus 228 g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~ 307 (551)
|.+.++++++++.+...+++++|||+|++|+|+|..+++.|.+|+++++.+.+++.+++++.+.+.+.+++.||++++++
T Consensus 174 G~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~ 253 (484)
T 3o0h_A 174 GSDLCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEA 253 (484)
T ss_dssp TGGGSBCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSC
T ss_pred CccccccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCC
Confidence 99888999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCCCC
Q 008841 308 SPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRIN 387 (551)
Q Consensus 308 ~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~~~ 387 (551)
+|++++.++++ +.|.+.+|+++++|.||+|+|++|++.+++++..|++++++|+|.||+++||++|+|||+|||++.++
T Consensus 254 ~V~~i~~~~~~-v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~ 332 (484)
T 3o0h_A 254 TVSQVQSTENC-YNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGHIQ 332 (484)
T ss_dssp CEEEEEECSSS-EEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTSCC
T ss_pred EEEEEEeeCCE-EEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCCc
Confidence 99999987766 78999999889999999999999999988788899999999999999999999999999999999999
Q ss_pred ChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcccccccCCCcEEEE
Q 008841 388 LTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMK 467 (551)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 467 (551)
+++.|..||+++|+||+|......++..+|+++|++|+++++|++|++|++++.++.++..+|..+.+++..+.+.+|+|
T Consensus 333 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k 412 (484)
T 3o0h_A 333 LTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMK 412 (484)
T ss_dssp CHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEEEE
T ss_pred CHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEEEE
Confidence 99999999999999999876666788899999999999999999999999998788888888988888887888899999
Q ss_pred EEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHhhhhh
Q 008841 468 LVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTRK 530 (551)
Q Consensus 468 l~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~~~~ 530 (551)
+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++....+.
T Consensus 413 ~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~ 475 (484)
T 3o0h_A 413 LVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTMYKPSYV 475 (484)
T ss_dssp EEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGCCCSCSEE
T ss_pred EEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHhhhhcc
Confidence 999999999999999999999999999999999999999999999999999998887765543
No 5
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.3e-73 Score=601.23 Aligned_cols=444 Identities=41% Similarity=0.727 Sum_probs=403.4
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhh-hccCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFD-ESNGF 147 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~-~~~~~ 147 (551)
|+.+|||+|||||++|+++|.+|++.|++|+||| +..+||+|.+.||+|++.++..+.....+. +...|
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE----------~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~ 70 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIE----------AKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDY 70 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGG
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEc----------CCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhc
Confidence 3446999999999999999999999999999999 557899999999999999999888777776 66777
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEEEeCeEEEcCCCCCCCCCCC
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPDIP 227 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~~~d~lviAtG~~p~~p~i~ 227 (551)
++... ...++|..+..+..+...++...+...+.+.+++++.+++.+++++++.++++.+.||++|+|||++|..|++|
T Consensus 71 g~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~p~~p~i~ 149 (450)
T 1ges_A 71 GFDTT-INKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIP 149 (450)
T ss_dssp TEEEE-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEETTEEEEEEEEEECCCEEECCCCST
T ss_pred CccCC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEECCEEEEeCEEEECCCCCCCCCCCC
Confidence 77543 35678999999888888888888888888899999999988899998888888999999999999999999999
Q ss_pred CCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 008841 228 GSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEE 307 (551)
Q Consensus 228 g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~ 307 (551)
|.+.++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.+++.||++++++
T Consensus 150 g~~~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~ 229 (450)
T 1ges_A 150 GVEYGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNA 229 (450)
T ss_dssp TGGGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSC
T ss_pred CccceecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCC
Confidence 98878889999988888999999999999999999999999999999999999998999999999999999999999999
Q ss_pred ccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCCCC
Q 008841 308 SPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRIN 387 (551)
Q Consensus 308 ~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~~~ 387 (551)
+|++++.++++.+.|.+.+|+++++|.||+|+|++|+++.|.++.+|++++++|+|.||+++||+.|+|||+|||++.+.
T Consensus 230 ~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~ 309 (450)
T 1ges_A 230 IPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVE 309 (450)
T ss_dssp CEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGTSCC
T ss_pred EEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccCCCCc
Confidence 99999886544467889999889999999999999999866678889999989999999999999999999999999889
Q ss_pred ChHHHHHhHHHHHHHHcCCCCCC-CCCCCccEEEecCCceEEeeCCHHHHHhcC--CCeEEEEeeccCcccccccCCCcE
Q 008841 388 LTPVALMEGGALAKTLFQAEPTK-PDYSAVPSAVFSQPPIGQVGLSEEQAIQEY--GDIDVFTANFRPLKATLSGLPDRI 464 (551)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~~~~~-~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 464 (551)
+++.|.+||+++|.||+|+.... .+|..+|+++|++|+++++|++|++|++.+ .++.++..++....+++..+.+.+
T Consensus 310 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (450)
T 1ges_A 310 LTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPC 389 (450)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSSCCEE
T ss_pred cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcCCCcE
Confidence 99999999999999999865545 678889999999999999999999999874 478888888888888776777889
Q ss_pred EEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHH
Q 008841 465 FMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVT 523 (551)
Q Consensus 465 ~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~ 523 (551)
|+|+++|+++|+|+|+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+
T Consensus 390 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 448 (450)
T 1ges_A 390 RMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVT 448 (450)
T ss_dssp EEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999998654
No 6
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=3.7e-73 Score=603.07 Aligned_cols=445 Identities=41% Similarity=0.709 Sum_probs=407.2
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
++.+|||+|||||++|+++|+.|++.|++|+||| +..+||+|.+.||+|++.++..+.....+.....|+
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE----------~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g 86 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYG 86 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEe----------cCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcC
Confidence 3446999999999999999999999999999999 668999999999999999999999888888888888
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCC--EEEEcCEEEEeCeEEEcCCCCCCCC--
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPH--TVDVDGKLYSARHILISVGGRPFIP-- 224 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~--~v~v~g~~~~~d~lviAtG~~p~~p-- 224 (551)
+... ...++|..+..+.....+.+...+...+.+.+++++.+++.++++. .+..+++++.||+||||||++|..|
T Consensus 87 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g~~~~~d~lviAtG~~p~~p~~ 165 (478)
T 3dk9_A 87 FPSC-EGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHE 165 (478)
T ss_dssp SCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEETTEEEECSCEEECCCEEECCCCT
T ss_pred ccCC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEECCEEEEeeEEEEccCCCCCCCCc
Confidence 8754 4678999999999988888888888888889999999999988764 5556888999999999999999999
Q ss_pred -CCCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEE
Q 008841 225 -DIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF 303 (551)
Q Consensus 225 -~i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 303 (551)
++||.+.++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++.||++
T Consensus 166 ~~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i 245 (478)
T 3dk9_A 166 SQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEV 245 (478)
T ss_dssp TTSTTGGGSBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCceeEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 9999888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcccEEEEEcCCc-eEEEEECC-------CeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCc
Q 008841 304 HTEESPQAILKSTDG-SLSVKTNK-------GTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPS 375 (551)
Q Consensus 304 ~~~~~v~~i~~~~~~-~~~V~~~~-------G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 375 (551)
++++.|++++.++++ .+.+.+.+ |+++++|.||+|+|++|+++.|+++..|++++++|+|.||+++||++||
T Consensus 246 ~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~ 325 (478)
T 3dk9_A 246 LKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 325 (478)
T ss_dssp ETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTT
T ss_pred EeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCC
Confidence 999999999886655 46677765 2679999999999999999977788999999999999999999999999
Q ss_pred EEEeCcCCCCCCChHHHHHhHHHHHHHHcCC-CCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCC--CeEEEEeeccC
Q 008841 376 IWAVGDVTDRINLTPVALMEGGALAKTLFQA-EPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRP 452 (551)
Q Consensus 376 vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~--~~~~~~~~~~~ 452 (551)
|||+|||++.+.+++.|..||+++|+||++. .....+|..+|+++|++|+++++|+||+||++++. ++.++..+|.+
T Consensus 326 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~ 405 (478)
T 3dk9_A 326 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTP 405 (478)
T ss_dssp EEECGGGGCSSCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECC
T ss_pred EEEEEecCCCCccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEeeCCHHHHHhhCCCccEEEEEeecCc
Confidence 9999999998999999999999999999987 34557888999999999999999999999998853 67788888888
Q ss_pred cccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHH
Q 008841 453 LKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTL 524 (551)
Q Consensus 453 ~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~ 524 (551)
+.+++..+.+.+|+|+++|+++|+|||+|++|+++.|+|+.+++||++|+|++||.+++++|||++|++.++
T Consensus 406 ~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 477 (478)
T 3dk9_A 406 MYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL 477 (478)
T ss_dssp GGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGSC
T ss_pred chhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHhc
Confidence 888877788899999999999999999999999999999999999999999999999999999999987654
No 7
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=3.9e-73 Score=603.30 Aligned_cols=456 Identities=41% Similarity=0.713 Sum_probs=411.9
Q ss_pred CccEEEECCChHHHHHHHHHHh-CCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAAN-FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+|||+|||||++|+++|++|++ .|++|+|||++... ..+++..+||+|.+.||+|+|.++..+.+.+.+.+...||+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~-~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHH-GPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSS-BTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEeccccc-ccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 6899999999999999999999 99999999932211 222356789999999999999999999988888888888886
Q ss_pred cCCCC--CCChHHHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEeEEEEecCCEEEE------cC---EEEEeCeEEEcCC
Q 008841 151 YGTEP--QHDWSTLIANKNAELQRLTGIYKNILINA-GITLIEGRGKIVDPHTVDV------DG---KLYSARHILISVG 218 (551)
Q Consensus 151 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~i~~~~v~v------~g---~~~~~d~lviAtG 218 (551)
.. .+ .++|..+..+..+....+...+...+++. +++++.+++.+++++++.+ ++ +.+.||+||||||
T Consensus 82 ~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtG 160 (490)
T 1fec_A 82 LD-RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATG 160 (490)
T ss_dssp CC-GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred cC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCC
Confidence 43 23 67999999999988888888888888888 9999999999999998888 46 7899999999999
Q ss_pred CCCCCCCCCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhC---CCeEEEEeecCccCCCCCHHHHHHHHHH
Q 008841 219 GRPFIPDIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGL---TSEVHVFIRQKKVLRGFDEDIRDFVAEQ 295 (551)
Q Consensus 219 ~~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~---g~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 295 (551)
++|..|++||.+.++++++++.+...+++++|||+|++|+|+|..|.++ |.+|+++++.+++++.+++++.+.+.+.
T Consensus 161 s~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~ 240 (490)
T 1fec_A 161 SWPQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQ 240 (490)
T ss_dssp EEECCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHH
Confidence 9999999999888889999999888899999999999999999999999 9999999999999999999999999999
Q ss_pred HHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCc
Q 008841 296 MSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPS 375 (551)
Q Consensus 296 l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 375 (551)
+++.||+++++++|++++.++++.+.|.+.+|+++++|.||+|+|++|+++.|.++.+|++++++|+|.||+++||+.|+
T Consensus 241 l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~ 320 (490)
T 1fec_A 241 LRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDN 320 (490)
T ss_dssp HHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTT
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCCC
Confidence 99999999999999999886554477889999889999999999999999866678899999989999999999999999
Q ss_pred EEEeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCccc
Q 008841 376 IWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKA 455 (551)
Q Consensus 376 vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~ 455 (551)
|||+|||++.+++++.|.+||+++|.||+|......+|..+|+++|++|+++++|++|++|++.+.++.+...+|.++.+
T Consensus 321 IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~~~~~~~~~~~~~~~ 400 (490)
T 1fec_A 321 IYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMH 400 (490)
T ss_dssp EEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHH
T ss_pred EEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhcCCCEEEEEeecChhhh
Confidence 99999999988999999999999999999876566788899999999999999999999999887678888888888887
Q ss_pred ccccCCCcEEE-EEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHhhhh
Q 008841 456 TLSGLPDRIFM-KLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTPTR 529 (551)
Q Consensus 456 ~~~~~~~~~~~-kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~~~ 529 (551)
++....+.+|+ |+++|+++|+|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++....+
T Consensus 401 ~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~ 475 (490)
T 1fec_A 401 NISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRTPAY 475 (490)
T ss_dssp HHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCCSCSE
T ss_pred hhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHHHHHh
Confidence 77777788999 999999999999999999999999999999999999999999999999999999876554333
No 8
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=3.1e-72 Score=592.52 Aligned_cols=445 Identities=41% Similarity=0.751 Sum_probs=405.3
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
|+.+|||+|||||++|+++|.+|++.|++|+||| +..+||+|.+.||+|++.++..+.....+.+...|+
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE----------~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 70 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIE----------SKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFG 70 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEc----------CCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcC
Confidence 3457999999999999999999999999999999 557899999999999999999888887777777787
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEEEeCeEEEcCCCCCCCCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPG 228 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~~~d~lviAtG~~p~~p~i~g 228 (551)
+... ...++|..+..+..+.++.+...+...+.+.+++++.+++.+++++++.++++.+.||++|+|||++|..|++||
T Consensus 71 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~p~~p~i~G 149 (463)
T 2r9z_A 71 VQAS-GGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGGRPIVPRLPG 149 (463)
T ss_dssp BCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEEECCCSCTT
T ss_pred cccC-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEECCEEEEcCEEEECCCCCCCCCCCCC
Confidence 7643 356899999999888888888888888888999999999888999988888889999999999999999999999
Q ss_pred CCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcc
Q 008841 229 SEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEES 308 (551)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 308 (551)
.+.++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.+++.||+++++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~ 229 (463)
T 2r9z_A 150 AELGITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFA 229 (463)
T ss_dssp GGGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCC
T ss_pred ccceecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCE
Confidence 87788899998888889999999999999999999999999999999999999889999999999999999999999999
Q ss_pred cEEEEEcCCceEEEEECCCe-EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCCCC
Q 008841 309 PQAILKSTDGSLSVKTNKGT-VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRIN 387 (551)
Q Consensus 309 v~~i~~~~~~~~~V~~~~G~-~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~~~ 387 (551)
|++++.++++ +.|.+.+|+ ++++|.||+|+|++|+++.|.++.++++++++|+|.||+++||+.|+|||+|||++.+.
T Consensus 230 v~~i~~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~ 308 (463)
T 2r9z_A 230 VAALERDAQG-TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITGRDQ 308 (463)
T ss_dssp EEEEEEETTE-EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGTSCC
T ss_pred EEEEEEeCCe-EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecCCCcc
Confidence 9999876655 778899998 89999999999999999866567889999989999999999999999999999999889
Q ss_pred ChHHHHHhHHHHHHHHcCCCCCC-CCCCCccEEEecCCceEEeeCCHHHHHhcC-CCeEEEEeeccCcccccccCCCcEE
Q 008841 388 LTPVALMEGGALAKTLFQAEPTK-PDYSAVPSAVFSQPPIGQVGLSEEQAIQEY-GDIDVFTANFRPLKATLSGLPDRIF 465 (551)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~~~~~-~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (551)
+++.|..||+++|.||+|..... .+|..+|+++|++|+++++|++|++|++++ .++.+...++.+..+++..+.+.+|
T Consensus 309 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (463)
T 2r9z_A 309 LTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLGDVLTVYETSFTPMRYALNEHGPKTA 388 (463)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCSCEEEEEEEECCGGGTTSSSCCCEE
T ss_pred cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCCCCEEEEEEEcccchhhhhcCCCcEE
Confidence 99999999999999999866544 678899999999999999999999999874 5788888888888888777788899
Q ss_pred EEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHH
Q 008841 466 MKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525 (551)
Q Consensus 466 ~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 525 (551)
+|+++|+++++|+|+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++.
T Consensus 389 ~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 448 (463)
T 2r9z_A 389 MKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLK 448 (463)
T ss_dssp EEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGCCC
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999977644
No 9
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=2.2e-72 Score=598.14 Aligned_cols=455 Identities=38% Similarity=0.635 Sum_probs=400.3
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.+|||+|||||+||++||..|++.|++|+|||+.... +......+||+|.+.||+|++.++..++....+.....||+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~-~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 83 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPS-PRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWE 83 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCC-TTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccc-cccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcc
Confidence 4699999999999999999999999999999931000 011145699999999999999999999988888889999988
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGRPFIPD 225 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p~~p~ 225 (551)
......++|..+..+.....+.+...+...+.+.+++++.+.+.+++++.+.+ ++ ..+.||+||||||++|..|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~ 163 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPT 163 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCC
Confidence 76667899999999998888888888888888899999999999999998888 34 58999999999999999998
Q ss_pred -CCCC-CceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEE
Q 008841 226 -IPGS-EYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF 303 (551)
Q Consensus 226 -i~g~-~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 303 (551)
+||. +..+++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++. .+++.+++++.+.+.+.|++.||++
T Consensus 164 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~ 242 (488)
T 3dgz_A 164 QVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQF 242 (488)
T ss_dssp SCBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCEE
Confidence 9997 456788999998888999999999999999999999999999999986 4678899999999999999999999
Q ss_pred EcCcccEEEEEcCCceEEEEECC---Ce--EEEeeEEEEecCcCCCCCCCCccccCeeec-CCCCeEeCCCCCCCCCcEE
Q 008841 304 HTEESPQAILKSTDGSLSVKTNK---GT--VDGFSHVMFATGRRPNTKNLGLEKVGVKMT-KNGAIEVDEYSGTAVPSIW 377 (551)
Q Consensus 304 ~~~~~v~~i~~~~~~~~~V~~~~---G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~-~~G~i~vd~~~~t~~~~vy 377 (551)
++++.++++...+++.+.+.+.+ |+ ++++|.|++|+|++|++++++++..+++++ ++|+|.||+++||++||||
T Consensus 243 ~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~Iy 322 (488)
T 3dgz_A 243 LKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIY 322 (488)
T ss_dssp EETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEE
T ss_pred EeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEE
Confidence 99999999987544435566543 55 479999999999999999887889999998 7899999999999999999
Q ss_pred EeCcCC-CCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcC--CCeEEEEeeccCcc
Q 008841 378 AVGDVT-DRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEY--GDIDVFTANFRPLK 454 (551)
Q Consensus 378 a~GD~~-~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~--~~~~~~~~~~~~~~ 454 (551)
|+|||+ +.+.+++.|..||+++|+||++......++..+|+++|++|+++++|+||+||++++ ..+.++...|.+..
T Consensus 323 A~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~ 402 (488)
T 3dgz_A 323 AIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLE 402 (488)
T ss_dssp ECGGGBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCHH
T ss_pred EeEEecCCCCcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEEEEccccchh
Confidence 999998 568899999999999999999877666788899999999999999999999999873 35777776676665
Q ss_pred cccccC-CCcEEEEEEEE-CCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHhh
Q 008841 455 ATLSGL-PDRIFMKLVLC-AKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTP 527 (551)
Q Consensus 455 ~~~~~~-~~~~~~kl~~~-~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~ 527 (551)
++.... .+.+|+||++| +++|+|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+++..
T Consensus 403 ~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 477 (488)
T 3dgz_A 403 FTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHIS 477 (488)
T ss_dssp HHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSTHHHHTCCEE
T ss_pred hhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHHHH
Confidence 543332 36899999999 58999999999999999999999999999999999999999999999999887533
No 10
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.1e-72 Score=598.04 Aligned_cols=450 Identities=25% Similarity=0.348 Sum_probs=403.5
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||+|||||+||++||.+|++.|++|+||| +..+||+|.|+||+|+|.++..++....+.+++.||+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE----------~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 77 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIE----------GGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQV 77 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEE----------SSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEe----------CCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCC
Confidence 5999999999999999999999999999999 566999999999999999999999988888899888863
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEeEEEEecCCEEEE-cCEEEEeCeEEEcCCCCCCCCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINA-GITLIEGRGKIVDPHTVDV-DGKLYSARHILISVGGRPFIPDIPGS 229 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~i~~~~v~v-~g~~~~~d~lviAtG~~p~~p~i~g~ 229 (551)
....++|..+..+.....+.+...+...+... +++++.+.+.+.+++++.+ +++.+.||++|||||++|..|++++.
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~ 156 (492)
T 3ic9_A 78 -DRISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAA 156 (492)
T ss_dssp -SEEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECCCCHHHHT
T ss_pred -CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCc
Confidence 24568899988888777776665555544443 6778999999999999999 88999999999999999999886653
Q ss_pred --CceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 008841 230 --EYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEE 307 (551)
Q Consensus 230 --~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~ 307 (551)
..++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++. |++++++
T Consensus 157 ~~~~v~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~ 235 (492)
T 3ic9_A 157 AGSRLLTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKA 235 (492)
T ss_dssp TGGGEECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTC
T ss_pred cCCcEEcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECC
Confidence 4688999999998899999999999999999999999999999999999999989999999999999988 9999999
Q ss_pred ccEEEEEcCCceEEEEEC--CC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeC-CCCCCCCCcEEEeCcC
Q 008841 308 SPQAILKSTDGSLSVKTN--KG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVD-EYSGTAVPSIWAVGDV 382 (551)
Q Consensus 308 ~v~~i~~~~~~~~~V~~~--~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~vya~GD~ 382 (551)
.|++++.++++ +.+.+. +| +++++|.||+|+|++|++++++++.++++++++|+|.|| +++||+.|+|||+|||
T Consensus 236 ~v~~i~~~~~~-v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~ 314 (492)
T 3ic9_A 236 RVISTIEKEDA-VEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDA 314 (492)
T ss_dssp EEEEEEECSSS-EEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGG
T ss_pred EEEEEEEcCCE-EEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEec
Confidence 99999987766 667664 67 679999999999999999998889999999999999999 9999999999999999
Q ss_pred CCCCCChHHHHHhHHHHHHHHcCC-CCCCCCCCCccEEEecCCceEEeeCCHHHHHhcC-----CCeEEEEeeccCcccc
Q 008841 383 TDRINLTPVALMEGGALAKTLFQA-EPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEY-----GDIDVFTANFRPLKAT 456 (551)
Q Consensus 383 ~~~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~-----~~~~~~~~~~~~~~~~ 456 (551)
++.+++++.|..||++||.||++. .....++..+|+++|++|+++++|+||+||++++ .++.+...+|..+.++
T Consensus 315 ~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a 394 (492)
T 3ic9_A 315 NNTLTLLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRS 394 (492)
T ss_dssp GTSSCSHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhh
Confidence 999999999999999999999973 3344567889999999999999999999999985 4788888889888888
Q ss_pred cccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHH-HhhhhhhcCC
Q 008841 457 LSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTL-RTPTRKIRKS 534 (551)
Q Consensus 457 ~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~-~~~~~~~~~~ 534 (551)
...+.+.+|+|+++|+++|+|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++ ....++++..
T Consensus 395 ~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~~~~~~~ 473 (492)
T 3ic9_A 395 RVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEEGLRTALRDAQQKLAIE 473 (492)
T ss_dssp HHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHHHHHHHHHHHHHTSSSC
T ss_pred hhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHHHHHHHHHHHHHHhhcc
Confidence 77788889999999999999999999999999999999999999999999999999999999999884 4455555543
No 11
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=4e-72 Score=595.68 Aligned_cols=453 Identities=38% Similarity=0.647 Sum_probs=399.1
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.+|||+|||||+||++||.+|++.|++|+|||+............+||+|.+.||+|++.++..++....+.....||+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 46999999999999999999999999999999311110011123599999999999999999999988888888899988
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC-EEEEeCeEEEcCCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG-KLYSARHILISVGGRPFIPDI 226 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g-~~~~~d~lviAtG~~p~~p~i 226 (551)
......++|..+..+....++.+...+...+...+++++.+.+.+++++.+.+ ++ ..+.||+||||||++|..|++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~i 167 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDI 167 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCSS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCCC
Confidence 77667889999999999888888877777888899999999999999998888 34 579999999999999999999
Q ss_pred CCC-CceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEc
Q 008841 227 PGS-EYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHT 305 (551)
Q Consensus 227 ~g~-~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~ 305 (551)
||. +..+++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++ +.+++.+++++.+.+.+.|++.||++++
T Consensus 168 ~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~ 246 (483)
T 3dgh_A 168 PGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLR 246 (483)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEe
Confidence 997 45678899998888899999999999999999999999999999998 5678889999999999999999999999
Q ss_pred CcccEEEEEcCCceEEEEECCCe-----EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeC
Q 008841 306 EESPQAILKSTDGSLSVKTNKGT-----VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVG 380 (551)
Q Consensus 306 ~~~v~~i~~~~~~~~~V~~~~G~-----~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~G 380 (551)
++.|++++.++++.+.|++.+++ ++++|.|++|+|++|++++++++..++++++ |+|.||+++||++|+|||+|
T Consensus 247 ~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t~~~~IyA~G 325 (483)
T 3dgh_A 247 KTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVANIYAVG 325 (483)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBCSSTTEEECS
T ss_pred CCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCccCCCCEEEEE
Confidence 99999998865544667766543 7999999999999999998777899999998 99999999999999999999
Q ss_pred cCC-CCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcC--CCeEEEEeeccCccccc
Q 008841 381 DVT-DRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEY--GDIDVFTANFRPLKATL 457 (551)
Q Consensus 381 D~~-~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~--~~~~~~~~~~~~~~~~~ 457 (551)
||+ +.+.+++.|..||+++|+||+|......+|..+|+++|++|+++++|+||+||++++ ..+.++...|.+..+.+
T Consensus 326 D~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~ 405 (483)
T 3dgh_A 326 DIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFI 405 (483)
T ss_dssp TTBTTSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCGGGTT
T ss_pred cccCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCCCCEEEEEEeecchhhhh
Confidence 998 568899999999999999999877666788999999999999999999999999874 25777776676665443
Q ss_pred cc-CCCcEEEEEEEECC-CCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHH
Q 008841 458 SG-LPDRIFMKLVLCAK-TNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525 (551)
Q Consensus 458 ~~-~~~~~~~kl~~~~~-~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 525 (551)
.. ..+.+|+||++|++ +|+|||+|++|+++.|+|+.+++||++|+|++||.+++++|||++|++.++.
T Consensus 406 ~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (483)
T 3dgh_A 406 PQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLA 475 (483)
T ss_dssp TTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGGCC
T ss_pred hccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 22 35679999999986 8999999999999999999999999999999999999999999999988765
No 12
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=5.5e-72 Score=598.29 Aligned_cols=460 Identities=38% Similarity=0.708 Sum_probs=401.0
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCC
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGF 147 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 147 (551)
+|..+|||+|||||+||++||..|++.|++|+|||+.... .......+||+|.+.||+|++.++..+.....+.....|
T Consensus 28 ~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~-~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~ 106 (519)
T 3qfa_A 28 PKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPT-PLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNY 106 (519)
T ss_dssp CSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCC-TTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCcc-ccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhc
Confidence 4555799999999999999999999999999999931000 001123799999999999999999999988888899999
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCCCC
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGRPF 222 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p~ 222 (551)
|+.......++|..+..+.+...+.+...+...++..+|+++.+.+.+++++.+.+ ++ .++.||+||||||++|.
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR 186 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEEC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcC
Confidence 99876667899999999999888888887888888899999999999999999888 33 37999999999999999
Q ss_pred CCCCCCCC-ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCc
Q 008841 223 IPDIPGSE-YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGI 301 (551)
Q Consensus 223 ~p~i~g~~-~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv 301 (551)
.|++||.+ .++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++. .+++.+++++.+.+.+.|++.||
T Consensus 187 ~p~i~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV 265 (519)
T 3qfa_A 187 YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRGFDQDMANKIGEHMEEHGI 265 (519)
T ss_dssp CCCCTTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cccccCCHHHHHHHHHHHHHCCC
Confidence 99999964 56788999998888999999999999999999999999999999984 67888999999999999999999
Q ss_pred EEEcCcccEEEEEcCC---ceEEE--EECCCe---EEEeeEEEEecCcCCCCCCCCccccCeeec-CCCCeEeCCCCCCC
Q 008841 302 EFHTEESPQAILKSTD---GSLSV--KTNKGT---VDGFSHVMFATGRRPNTKNLGLEKVGVKMT-KNGAIEVDEYSGTA 372 (551)
Q Consensus 302 ~i~~~~~v~~i~~~~~---~~~~V--~~~~G~---~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~-~~G~i~vd~~~~t~ 372 (551)
++++++.++++...++ +.+.+ ...+|+ ++++|.|++|+|++|++++++++..+++++ ++|+|.||+++||+
T Consensus 266 ~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts 345 (519)
T 3qfa_A 266 KFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTN 345 (519)
T ss_dssp EEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBCS
T ss_pred EEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCccC
Confidence 9999998888876432 22344 345552 578999999999999999888889999998 67999999999999
Q ss_pred CCcEEEeCcCC-CCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCC--CeEEEEee
Q 008841 373 VPSIWAVGDVT-DRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTAN 449 (551)
Q Consensus 373 ~~~vya~GD~~-~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~--~~~~~~~~ 449 (551)
+|||||+|||+ +.+.+++.|..||+++|+||+|......++..+|+++|++|+++++|+||+||+++++ .+.++...
T Consensus 346 ~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~ 425 (519)
T 3qfa_A 346 VPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSY 425 (519)
T ss_dssp STTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEEEEEEe
Confidence 99999999999 6689999999999999999998776677899999999999999999999999998743 57777777
Q ss_pred ccCcccccccC-CCcEEEEEEEEC-CCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHhh
Q 008841 450 FRPLKATLSGL-PDRIFMKLVLCA-KTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRTP 527 (551)
Q Consensus 450 ~~~~~~~~~~~-~~~~~~kl~~~~-~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~ 527 (551)
|.+..++.... .+.+|+||++|+ ++|+|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++...
T Consensus 426 ~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~~~ 505 (519)
T 3qfa_A 426 FWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTLSVT 505 (519)
T ss_dssp ECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCTTCGGGGGGGCCCB
T ss_pred ccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHHhh
Confidence 77766654433 468999999997 5899999999999999999999999999999999999999999999998887755
Q ss_pred hh
Q 008841 528 TR 529 (551)
Q Consensus 528 ~~ 529 (551)
++
T Consensus 506 ~~ 507 (519)
T 3qfa_A 506 KR 507 (519)
T ss_dssp TT
T ss_pred hh
Confidence 53
No 13
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-71 Score=590.83 Aligned_cols=442 Identities=39% Similarity=0.722 Sum_probs=398.4
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.+|||+|||||++|+++|.+|++.|++|+||| +..+||+|.|.||+|++.++..+.....+.....|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE----------~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~ 79 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVE----------AKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLY 79 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEe----------CCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcc
Confidence 46899999999999999999999999999999 55799999999999999999888877777777777775
Q ss_pred cC----C-CCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cCE--EEEeCeEEEcCCCC
Q 008841 151 YG----T-EPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DGK--LYSARHILISVGGR 220 (551)
Q Consensus 151 ~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g~--~~~~d~lviAtG~~ 220 (551)
.. . ...++|..+..+.......+...+...+++.+++++.+++..++++.+.+ +++ .+.||+||+|||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~ 159 (479)
T 2hqm_A 80 QNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGK 159 (479)
T ss_dssp TTSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEE
T ss_pred cccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCC
Confidence 41 1 35688999998888888888888888888899999999988888877766 555 79999999999999
Q ss_pred CCCC-CCCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhc
Q 008841 221 PFIP-DIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLR 299 (551)
Q Consensus 221 p~~p-~i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~ 299 (551)
|..| ++||.+.++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.|++.
T Consensus 160 p~~p~~i~g~~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~ 239 (479)
T 2hqm_A 160 AIFPENIPGFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKE 239 (479)
T ss_dssp ECCCTTSTTGGGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhC
Confidence 9999 899988788889999988889999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEcCcccEEEEEcCCc-eEEEEECCC-eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEE
Q 008841 300 GIEFHTEESPQAILKSTDG-SLSVKTNKG-TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIW 377 (551)
Q Consensus 300 Gv~i~~~~~v~~i~~~~~~-~~~V~~~~G-~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vy 377 (551)
||+++++++|++++.++++ .+.|.+.+| +++++|.||+|+|++|++ .|.++..|++++++|+|.||+++||+.|+||
T Consensus 240 Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd~~~~t~~~~Iy 318 (479)
T 2hqm_A 240 GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIADEYQNTNVPNIY 318 (479)
T ss_dssp TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCCTTCBCSSTTEE
T ss_pred CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeECCCCccCCCCEE
Confidence 9999999999999876443 367888999 789999999999999999 4446888999999999999999999999999
Q ss_pred EeCcCCCCCCChHHHHHhHHHHHHHHcCCC---CCCCCCCCccEEEecCCceEEeeCCHHHHHhcCC--CeEEEEeeccC
Q 008841 378 AVGDVTDRINLTPVALMEGGALAKTLFQAE---PTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRP 452 (551)
Q Consensus 378 a~GD~~~~~~~~~~A~~~g~~aa~~i~g~~---~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~--~~~~~~~~~~~ 452 (551)
|+|||++.+.+++.|.+||+++|.||+|.. ....+|..+|+++|++|+++++|++|++|+++++ ++.+...++..
T Consensus 319 A~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~~~~~~~~~~~ 398 (479)
T 2hqm_A 319 SLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTA 398 (479)
T ss_dssp ECGGGTTSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECC
T ss_pred EEEecCCCcccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCCCcEEEEEEeccH
Confidence 999999988999999999999999999865 4446778899999999999999999999988743 48888888888
Q ss_pred cccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHH
Q 008841 453 LKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVT 523 (551)
Q Consensus 453 ~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~ 523 (551)
..+++..+.+.+|+|+++|+++|+|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+
T Consensus 399 ~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 469 (479)
T 2hqm_A 399 MYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVT 469 (479)
T ss_dssp GGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred HHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHHH
Confidence 88887777788999999999999999999999999999999999999999999999999999999998754
No 14
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.4e-71 Score=590.22 Aligned_cols=440 Identities=39% Similarity=0.671 Sum_probs=388.6
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||+|||||+||+++|.+|++.|++|+||| +..+||+|.+.||+|++.++..+.+...+.+...||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE----------~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~ 71 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVE----------KSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDT 71 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCC
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEe----------CCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCcc
Confidence 5899999999999999999999999999999 456899999999999999999888888888877788764
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE-c-------------CEEEEeCeEEEcC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV-D-------------GKLYSARHILISV 217 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v-~-------------g~~~~~d~lviAt 217 (551)
. ..++|..+..+..+.+..+...+...+.+.+++++.+++..++++.+.+ + +..+.||+||+||
T Consensus 72 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAt 149 (500)
T 1onf_A 72 K--FSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAV 149 (500)
T ss_dssp C--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECC
T ss_pred C--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECC
Confidence 4 6789999998888888888877888888899999999877777777666 3 5679999999999
Q ss_pred CCCCCCCCCCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHH
Q 008841 218 GGRPFIPDIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297 (551)
Q Consensus 218 G~~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~ 297 (551)
|++|..|++||.+.++++++++.+.. +++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|+
T Consensus 150 Gs~p~~p~i~G~~~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~ 228 (500)
T 1onf_A 150 GNKPVFPPVKGIENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMK 228 (500)
T ss_dssp CCCBCCCSCTTGGGCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHH
Confidence 99999999999887888899988877 99999999999999999999999999999999999999999999999999999
Q ss_pred hcCcEEEcCcccEEEEEcCCceEEEEECCCeE-EEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcE
Q 008841 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTV-DGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSI 376 (551)
Q Consensus 298 ~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~-i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~v 376 (551)
++||+++++++|++++.++++.+.|.+.+|++ +++|.||+|+|++|+++.|.++.+++++ ++|+|.||+++||+.|+|
T Consensus 229 ~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~~~i 307 (500)
T 1onf_A 229 KNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSVNNI 307 (500)
T ss_dssp HTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSSSSE
T ss_pred hCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCCCCE
Confidence 99999999999999987654446788899988 9999999999999999766578889998 789999999999999999
Q ss_pred EEeCcCC----------------------------------CCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEec
Q 008841 377 WAVGDVT----------------------------------DRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFS 422 (551)
Q Consensus 377 ya~GD~~----------------------------------~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~ 422 (551)
||+|||+ +.+++++.|.+||+++|+||+|+.....+|..+|+++|+
T Consensus 308 ya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~ 387 (500)
T 1onf_A 308 YAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFS 387 (500)
T ss_dssp EECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEEECC
T ss_pred EEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeEEEc
Confidence 9999999 456889999999999999999866556678889999999
Q ss_pred CCceEEeeCCHHHHHhcC--CCeEEEEeeccCccccc----ccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHH
Q 008841 423 QPPIGQVGLSEEQAIQEY--GDIDVFTANFRPLKATL----SGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAV 496 (551)
Q Consensus 423 ~~~~~~vGl~~~~a~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~ 496 (551)
+|+++++|++|++|++.+ .++.++..++....++. ....+.+|+|+++|+++|+|||+|++|+++.|+|+.+++
T Consensus 388 ~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ 467 (500)
T 1onf_A 388 HPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAV 467 (500)
T ss_dssp SSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHH
T ss_pred CcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHH
Confidence 999999999999998874 47888888888877765 455678999999999999999999999999999999999
Q ss_pred HHHCCCCHHHHccCcccCCCchHHHHHHH
Q 008841 497 AVKAGLTKADFDATVGVHPTAAEEFVTLR 525 (551)
Q Consensus 497 ~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 525 (551)
||++++|++||.+++++|||++|++.++.
T Consensus 468 ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 468 ALKMNATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp HHHTTCBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred HHHcCCCHHHHhccccCCCCHHHHHHHhc
Confidence 99999999999999999999999987644
No 15
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.5e-71 Score=588.11 Aligned_cols=445 Identities=29% Similarity=0.465 Sum_probs=398.5
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhh-ccC
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDE-SNG 146 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~-~~~ 146 (551)
+++++|||+|||||+||++||..|++.|++|+|||+ ...+||+|.+.||+|++.++..++....... +..
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk---------~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~ 91 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEK---------RSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEA 91 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGG
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEec---------CCCCCCccccccchhhHHHHHHHHHHHHHHhhHhh
Confidence 344569999999999999999999999999999993 4679999999999999999998887776665 577
Q ss_pred CCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCCC
Q 008841 147 FGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGRP 221 (551)
Q Consensus 147 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p 221 (551)
+|+... .+.++|..+..+.......+...+...+.+.+++++.+.+.+++++.+.+ ++ ..+.||+||||||++|
T Consensus 92 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 92 LGVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp GTEECC-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEEC
T ss_pred cCcccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCC
Confidence 887654 56789999999998888888888888889999999999999999988887 34 6899999999999986
Q ss_pred CCCCCCCCC------ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHH
Q 008841 222 FIPDIPGSE------YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQ 295 (551)
Q Consensus 222 ~~p~i~g~~------~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 295 (551)
. ++||.+ .++++++.+.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.
T Consensus 171 ~--~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~ 248 (491)
T 3urh_A 171 A--GIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRM 248 (491)
T ss_dssp C--CBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHH
T ss_pred C--CCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHH
Confidence 3 445542 47888888888888999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcEEEcCcccEEEEEcCCceEEEEECC---C--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCC
Q 008841 296 MSLRGIEFHTEESPQAILKSTDGSLSVKTNK---G--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG 370 (551)
Q Consensus 296 l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~---G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~ 370 (551)
+++.||+++++++|++++.++++ +.+.+.+ | +++++|.||+|+|++|++++++++..+++++++|+|.||+++|
T Consensus 249 l~~~gV~v~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~ 327 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKSGDG-AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQ 327 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEETTE-EEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCB
T ss_pred HHhCCCEEEECCeEEEEEEeCCE-EEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCC
Confidence 99999999999999999887665 5566542 5 5799999999999999999887888999999999999999999
Q ss_pred CCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeec
Q 008841 371 TAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANF 450 (551)
Q Consensus 371 t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~ 450 (551)
|++|+|||+|||++.+++++.|..||+++|+||+|.. ...++..+|+++|++|+++++|+||+||++++.++.+...+|
T Consensus 328 t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~ 406 (491)
T 3urh_A 328 TSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQA-GHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPF 406 (491)
T ss_dssp CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSC-CCCCTTCCCEEECSSSCEEEEECCHHHHHHTTCCEEEEEEEG
T ss_pred CCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCC-cccCCCCCCEEEEccCCeEEEeCCHHHHHhCCCCEEEEEEec
Confidence 9999999999999999999999999999999999865 345788899999999999999999999999988899988888
Q ss_pred cCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 451 RPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 451 ~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
....++...+.+.+|+|+++|+++|+|||+|++|+++.|+|+.+++||++|+|++||.+++++|||++|++.++..
T Consensus 407 ~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 482 (491)
T 3urh_A 407 TANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAAL 482 (491)
T ss_dssp GGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHH
T ss_pred CcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHH
Confidence 8888887777888999999999999999999999999999999999999999999999999999999999887544
No 16
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=4.7e-71 Score=584.55 Aligned_cols=436 Identities=24% Similarity=0.363 Sum_probs=394.3
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
|+++|||+|||||++|+++|..|++.|++|+|||+ ...+||+|.+.||+|++.++..+.....+.+...
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk---------~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~-- 69 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADP---------KGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN-- 69 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECT---------TSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEEC---------CCCCCCcccccCCCchHHHHHHHHHHHHHHhccc--
Confidence 34569999999999999999999999999999994 6779999999999999999999888777776654
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHH--HHHHHHHHhCCeEEEEeEEEEecCCEEEE---cCEE--EEeCeEEEcCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLT--GIYKNILINAGITLIEGRGKIVDPHTVDV---DGKL--YSARHILISVGGRP 221 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g~~--~~~d~lviAtG~~p 221 (551)
....++|..+..+.....+ +. ..+...+.+.+++++.+++.++++..+.+ +++. +.||+||+|||++|
T Consensus 70 ----~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 70 ----VKIPLDFSTVQDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp ----SCCCCCHHHHHHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred ----CCCCcCHHHHHHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCc
Confidence 2456789999888887777 66 66777778889999999999999888777 5556 99999999999999
Q ss_pred CCCCCCCCCceecchhhh----cCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCC-CHHHHHHHHHHH
Q 008841 222 FIPDIPGSEYAIDSDAAL----DLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF-DEDIRDFVAEQM 296 (551)
Q Consensus 222 ~~p~i~g~~~~~~~~~~~----~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~-~~~~~~~l~~~l 296 (551)
..|++||.+.+++.++++ .+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+ ++++.+.+.+.+
T Consensus 145 ~~p~i~G~~~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l 224 (466)
T 3l8k_A 145 AKLRLPGVEYCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSIL 224 (466)
T ss_dssp CCCCCTTGGGSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHH
T ss_pred cCCCCCCccceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcC
Confidence 999999998888999988 667778999999999999999999999999999999999999987 999999998888
Q ss_pred HhcCcEEEcCcccEEEEEcC-CceEEEEEC--CCe--EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCC
Q 008841 297 SLRGIEFHTEESPQAILKST-DGSLSVKTN--KGT--VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGT 371 (551)
Q Consensus 297 ~~~Gv~i~~~~~v~~i~~~~-~~~~~V~~~--~G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t 371 (551)
+ |+++++++|++++.++ ++ +.+.+. +|+ ++++|.|++|+|++|+++ |+++..|++++++| |.||+++||
T Consensus 225 ~---v~i~~~~~v~~i~~~~~~~-v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd~~~~t 298 (466)
T 3l8k_A 225 K---LNIKFNSPVTEVKKIKDDE-YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVDETMKT 298 (466)
T ss_dssp C---CCEECSCCEEEEEEEETTE-EEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCCTTCBC
T ss_pred E---EEEEECCEEEEEEEcCCCc-EEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeECCCccC
Confidence 7 9999999999998866 54 678887 676 799999999999999999 66789999999999 999999999
Q ss_pred CCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCC--CCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEee
Q 008841 372 AVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQA--EPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTAN 449 (551)
Q Consensus 372 ~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~--~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~ 449 (551)
++|+|||+|||++.+++++.|..||+++|.||+|. .....++..+|+++|++|+++++|++|++|++++.++.+...+
T Consensus 299 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~ 378 (466)
T 3l8k_A 299 NIPNVFATGDANGLAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIEIVEAEYN 378 (466)
T ss_dssp SSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTCCEEEEEEE
T ss_pred CCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhCCCCEEEEEEE
Confidence 99999999999999999999999999999999987 5556688899999999999999999999999998899999988
Q ss_pred ccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 450 FRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 450 ~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
+....+++..+.+.+|+|+++|+++|+|||+|++|+++.|+|+.+++||++|+|++||.+++++|||++|++.++..
T Consensus 379 ~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~ 455 (466)
T 3l8k_A 379 MEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEIISYTAR 455 (466)
T ss_dssp GGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHHHHHH
T ss_pred cccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHHHHHHH
Confidence 88888877777889999999999999999999999999999999999999999999999999999999999876544
No 17
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.7e-70 Score=582.39 Aligned_cols=450 Identities=30% Similarity=0.466 Sum_probs=400.0
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhh-ccCCCc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDE-SNGFGW 149 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~-~~~~g~ 149 (551)
++|||+|||||++|++||++|++.|++|+|||+.. .......+||+|.+.||+|++.++..+........ +..||+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~---~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~ 78 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK---GKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGI 78 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB---CTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC---ccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 36999999999999999999999999999999310 00011248999999999999999988877766654 567777
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGRPFIP 224 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p~~p 224 (551)
... ...++|..+..+.....+.+...+...+++.+++++.+.+.++++..+.+ ++ ..+.||++|+|||++|..|
T Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 157 (476)
T 3lad_A 79 STG-EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEI 157 (476)
T ss_dssp ECS-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCC
T ss_pred ccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCC
Confidence 653 46789999999988888888888888888889999999999999888777 34 6899999999999999877
Q ss_pred CCCCC--CceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcE
Q 008841 225 DIPGS--EYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIE 302 (551)
Q Consensus 225 ~i~g~--~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 302 (551)
+.++. ..++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.+++.||+
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 237 (476)
T 3lad_A 158 PPAPVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLK 237 (476)
T ss_dssp TTSCCCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEE
T ss_pred CCCCCCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCE
Confidence 65553 3578889999888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcccEEEEEcCCceEEEEECCC---eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEe
Q 008841 303 FHTEESPQAILKSTDGSLSVKTNKG---TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAV 379 (551)
Q Consensus 303 i~~~~~v~~i~~~~~~~~~V~~~~G---~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~ 379 (551)
++++++|++++.++++ +.+.+.++ +++++|.||+|+|++|+++++.++..+++++++|+|.||+++||++|||||+
T Consensus 238 v~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~ 316 (476)
T 3lad_A 238 ILLGARVTGTEVKNKQ-VTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAI 316 (476)
T ss_dssp EEETCEEEEEEECSSC-EEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEEC
T ss_pred EEECCEEEEEEEcCCE-EEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEE
Confidence 9999999999987666 66777654 5799999999999999998776889999999999999999999999999999
Q ss_pred CcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCccccccc
Q 008841 380 GDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSG 459 (551)
Q Consensus 380 GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 459 (551)
|||++.+.+++.|..||+++|+||+|... ..++..+|+++|++|+++++|+||+||++++.++.+...++....++...
T Consensus 317 GD~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~ 395 (476)
T 3lad_A 317 GDVVRGAMLAHKASEEGVVVAERIAGHKA-QMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAA 395 (476)
T ss_dssp GGGSSSCCCHHHHHHHHHHHHHHHHHCCC-CCCTTCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHH
T ss_pred EccCCCcccHHHHHHHHHHHHHHhcCCCc-ccCCCCCCEEEECcCCEEEeeCCHHHHHhcCCCEEEEEEeccccchheec
Confidence 99999899999999999999999998653 45788899999999999999999999999988898888888888888777
Q ss_pred CCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 460 LPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 460 ~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
+.+.+|+|+++|+++|+|||+|++|+++.|+|+.+++||++|+|++||.+++++|||++|++.++..
T Consensus 396 ~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 462 (476)
T 3lad_A 396 NDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAAL 462 (476)
T ss_dssp TCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCCCSSCSHHHHHHHHH
T ss_pred CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHH
Confidence 7788999999999999999999999999999999999999999999999999999999999877544
No 18
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.9e-70 Score=582.32 Aligned_cols=447 Identities=29% Similarity=0.448 Sum_probs=400.4
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCC
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGF 147 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 147 (551)
+|+.+|||+|||||++|+++|..|++.|++|+|||+ ...+||+|.+.||+|++.++...+..+.+.....+
T Consensus 2 ~m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~---------~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~ 72 (482)
T 1ojt_A 2 SADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVER---------YKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAAN 72 (482)
T ss_dssp CSEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeC---------CCCCCCceeeecccchHHHHHHHHHHHHHHHHHhC
Confidence 455679999999999999999999999999999992 36799999999999999998888777777777777
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC------------EEEEeCe
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG------------KLYSARH 212 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g------------~~~~~d~ 212 (551)
|+... ...+++..+..+.......+...+...+.+.+++++.+++.+++++.+.+ ++ ..+.||+
T Consensus 73 gi~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~ 151 (482)
T 1ojt_A 73 GIKYP-EPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKN 151 (482)
T ss_dssp TCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred CcccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCE
Confidence 76653 45678999988888788877777777888889999999988888887776 35 6799999
Q ss_pred EEEcCCCCCCCCC-CCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHH
Q 008841 213 ILISVGGRPFIPD-IPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDF 291 (551)
Q Consensus 213 lviAtG~~p~~p~-i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 291 (551)
+|+|||++|..|+ ++....++++++++.+.+.+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.
T Consensus 152 lViAtGs~p~~~~~i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~ 231 (482)
T 1ojt_A 152 CIIAAGSRVTKLPFIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKV 231 (482)
T ss_dssp EEECCCEEECCCSSCCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHH
T ss_pred EEECCCCCCCCCCCCCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHH
Confidence 9999999998887 664335889999998888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECC----CeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCC
Q 008841 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNK----GTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDE 367 (551)
Q Consensus 292 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~----G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~ 367 (551)
+.+.|++.||+++++++|++++.++++ +.|.+.+ |+++++|.||+|+|++|++++++++.++++++++|+|.||+
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~ 310 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDG-VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDK 310 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTE-EEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCT
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCe-EEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCC
Confidence 999999999999999999999876655 6677766 77899999999999999999877789999999889999999
Q ss_pred CCCCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEE
Q 008841 368 YSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFT 447 (551)
Q Consensus 368 ~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~ 447 (551)
++||+.|+|||+|||++.+++++.|..||+++|.||+|.. ...+|..+|+++|++|+++++|++|++|++.+.++.+..
T Consensus 311 ~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~ 389 (482)
T 1ojt_A 311 QMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHK-AYFDARVIPGVAYTSPEVAWVGETELSAKASARKITKAN 389 (482)
T ss_dssp TSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEEECSSSCEEEEECCHHHHHHHTCCEEEEE
T ss_pred CcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCC-ccCCCCCCCEEEEcCCCeEEEeCCHHHHHhcCCCEEEEE
Confidence 9999999999999999988999999999999999999854 345678899999999999999999999999888898888
Q ss_pred eeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 448 ANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
.++....++...+.+.+|+|+++|+++|+|+|+|++|+++.|+|+.+++||++++|++||.+++++|||++|.+.++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~ 468 (482)
T 1ojt_A 390 FPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAE 468 (482)
T ss_dssp EEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSTTHHHHHHH
T ss_pred EEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHH
Confidence 8888877777667788999999999999999999999999999999999999999999999999999999999887543
No 19
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.1e-70 Score=579.00 Aligned_cols=440 Identities=31% Similarity=0.499 Sum_probs=398.2
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
++||+|||||+||+++|..|++.|++|+||| +..+||+|.+.||+|++.++..+...+.+.....||+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie----------~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~- 74 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVE----------AGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK- 74 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEe----------CCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC-
Confidence 5899999999999999999999999999999 44599999999999999999888877777777778876
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEEEeCeEEEcCCCCCCCCC-CCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPD-IPGSE 230 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~~~d~lviAtG~~p~~p~-i~g~~ 230 (551)
....++|..+..+..+..+.+...+...+++.+++++.+++.+++++++.++++.+.||+||+|||++|..|+ +++..
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~g~~~~~d~lViATGs~p~~p~gi~~~~ 153 (464)
T 2eq6_A 75 -AKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGE 153 (464)
T ss_dssp -CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEEECCBTTBCCSS
T ss_pred -CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEccEEEEeCEEEEcCCCCCCCCCCCCCCC
Confidence 4567899999988888888877777778888899999999888898988887788999999999999999886 87754
Q ss_pred ceecchhhhcCCC-CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCccc
Q 008841 231 YAIDSDAALDLPS-KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESP 309 (551)
Q Consensus 231 ~~~~~~~~~~~~~-~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v 309 (551)
.++++++++++.. .+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.+++.||+++++++|
T Consensus 154 ~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v 233 (464)
T 2eq6_A 154 DVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKA 233 (464)
T ss_dssp SEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred cEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEE
Confidence 6889999888876 789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCceEEEEEC-C--Ce--EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCC
Q 008841 310 QAILKSTDGSLSVKTN-K--GT--VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTD 384 (551)
Q Consensus 310 ~~i~~~~~~~~~V~~~-~--G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~ 384 (551)
++++.++++ +.|.+. + |+ ++++|.||+|+|++|+++++.++..|++++++|+|.||+++||+.|+|||+|||++
T Consensus 234 ~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~ 312 (464)
T 2eq6_A 234 VGYEKKKDG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAAR 312 (464)
T ss_dssp EEEEEETTE-EEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTC
T ss_pred EEEEEeCCE-EEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEeccCC
Confidence 999876655 667765 6 76 79999999999999999987678889999888999999999999999999999999
Q ss_pred CCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcccccccCCCcE
Q 008841 385 RINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRI 464 (551)
Q Consensus 385 ~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (551)
.+++++.|..||+++|.||+|.+ ...++. +|+++|++|+++++|++|++|++.+.++.+...++....++...+++.+
T Consensus 313 ~~~l~~~A~~~g~~aa~~i~g~~-~~~~~~-~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g 390 (464)
T 2eq6_A 313 PPLLAHKAMREGLIAAENAAGKD-SAFDYQ-VPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEG 390 (464)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCC-CCCCCC-CCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTSCCCC
T ss_pred CcccHHHHHHHHHHHHHHhcCCC-cccCCC-CCeEEECCCCEEEEeCCHHHHHhcCCCEEEEEEEcCcchhhhhcCCCcE
Confidence 99999999999999999999854 345677 9999999999999999999999988888888888888777766677789
Q ss_pred EEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 465 FMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 465 ~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
|+|+++|+++|+|+|+|++|+.+.|+|+.+++||++++|++||.+++++|||++|.+.++..
T Consensus 391 ~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 452 (464)
T 2eq6_A 391 MVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAE 452 (464)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHH
Confidence 99999998899999999999999999999999999999999999999999999999887654
No 20
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=4.7e-70 Score=577.68 Aligned_cols=444 Identities=26% Similarity=0.439 Sum_probs=396.1
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhh-ccCCCcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDE-SNGFGWK 150 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~-~~~~g~~ 150 (551)
+|||+|||||+||+++|.+|++.|++|+|||+ ...+||+|.+.||+|++.++..++..+.+.. +..+|+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~---------~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~ 72 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEK---------RGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLM 72 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeC---------CCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 58999999999999999999999999999992 3479999999999999999888776666654 5566665
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGRPFIPD 225 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p~~p~ 225 (551)
......++|..+..+.....+.+...+...+.+.+++++.+++.+++++.+.+ ++ ..+.||++|+|||++|..|+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~ 152 (468)
T 2qae_A 73 GGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELP 152 (468)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBT
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCC
Confidence 32234578999988888888887777778888889999999988899888777 45 78999999999999999999
Q ss_pred CCCCC--ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHH-HhcCcE
Q 008841 226 IPGSE--YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQM-SLRGIE 302 (551)
Q Consensus 226 i~g~~--~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l-~~~Gv~ 302 (551)
++|.+ .++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.+ ++.||+
T Consensus 153 ~~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~ 232 (468)
T 2qae_A 153 FLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMK 232 (468)
T ss_dssp TBCCCSSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCCcCceechHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcE
Confidence 88865 488999999888889999999999999999999999999999999999999999999999999999 999999
Q ss_pred EEcCcccEEEEEcCCceEEEEEC--CC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEE
Q 008841 303 FHTEESPQAILKSTDGSLSVKTN--KG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWA 378 (551)
Q Consensus 303 i~~~~~v~~i~~~~~~~~~V~~~--~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya 378 (551)
++++++|++++.++++ +.+.+. +| +++++|.||+|+|++|++++++++..+++++++|+|.||+++||+.|+|||
T Consensus 233 i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA 311 (468)
T 2qae_A 233 FMTSTKVVGGTNNGDS-VSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYA 311 (468)
T ss_dssp EECSCEEEEEEECSSS-EEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred EEeCCEEEEEEEcCCe-EEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCEEE
Confidence 9999999999887655 666665 66 679999999999999999987778889999988999999999999999999
Q ss_pred eCcCCC-CCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCccccc
Q 008841 379 VGDVTD-RINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATL 457 (551)
Q Consensus 379 ~GD~~~-~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~ 457 (551)
+|||++ .+++++.|..||+++|.||+|.+ ...+|..+|+++|++|+++++|++|++|++.+.++.+...++....++.
T Consensus 312 ~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 390 (468)
T 2qae_A 312 IGDVVDKGPMLAHKAEDEGVACAEILAGKP-GHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNANSRAK 390 (468)
T ss_dssp CGGGBSSSCSCHHHHHHHHHHHHHHHTTCC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHH
T ss_pred eeccCCCCCccHhHHHHHHHHHHHHHcCCC-ccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEecccchhhh
Confidence 999999 88999999999999999999854 3456788999999999999999999999998888999888888888877
Q ss_pred ccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 458 SGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 458 ~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
..+.+.+|+|+++|+++|+|+|+|++|+.+.|+|+.+++||++++|++||.+++++|||++|.+.++..
T Consensus 391 ~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 459 (468)
T 2qae_A 391 AVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACM 459 (468)
T ss_dssp HTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTHHHHHHHHH
T ss_pred hcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 677788999999999899999999999999999999999999999999999999999999999877543
No 21
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.1e-69 Score=570.57 Aligned_cols=441 Identities=30% Similarity=0.506 Sum_probs=395.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||+|||||+||+++|.+|++.|++|+||| +..+||+|.+.||+|++.++...+..+.+.....+|+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie----------~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~ 72 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVE----------KGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKA 72 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEE----------CCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 5899999999999999999999999999999 447899999999999999988887777777777777764
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC-EEEEeCeEEEcCCCCCCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG-KLYSARHILISVGGRPFIPDIP 227 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g-~~~~~d~lviAtG~~p~~p~i~ 227 (551)
. ....+|..+..+..+..+.+...+...+.+.+++++.+++.+++++.+.+ ++ +.+.||+||+|||++|..|+++
T Consensus 73 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~ 151 (455)
T 1ebd_A 73 E-NVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNF 151 (455)
T ss_dssp C-SCEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTB
T ss_pred C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCC
Confidence 3 34578888888887777777777778888889999999988888887777 35 6899999999999999999888
Q ss_pred CCC-ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcC
Q 008841 228 GSE-YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTE 306 (551)
Q Consensus 228 g~~-~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 306 (551)
|.+ .++++++.+.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.+++.||+++++
T Consensus 152 g~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 231 (455)
T 1ebd_A 152 KFSNRILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTN 231 (455)
T ss_dssp CCCSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred CccceEecHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 864 3788888888888899999999999999999999999999999999999999899999999999999999999999
Q ss_pred cccEEEEEcCCceEEEEEC---CCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCC
Q 008841 307 ESPQAILKSTDGSLSVKTN---KGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT 383 (551)
Q Consensus 307 ~~v~~i~~~~~~~~~V~~~---~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~ 383 (551)
++|++++.++++ +.+.+. +++++++|.||+|+|++|++++++++..+++++++|+|.||+++||+.|+|||+|||+
T Consensus 232 ~~v~~i~~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~ 310 (455)
T 1ebd_A 232 ALAKGAEEREDG-VTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIV 310 (455)
T ss_dssp EEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGS
T ss_pred CEEEEEEEeCCe-EEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccC
Confidence 999999876655 556654 4567999999999999999998777888999998899999999999999999999999
Q ss_pred CCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcccccccCCCc
Q 008841 384 DRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDR 463 (551)
Q Consensus 384 ~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (551)
+.+++++.|..||+++|+||+|.. ...+|..+|+++|++|+++++|++|++|++.+.++.+...++....++...+.+.
T Consensus 311 ~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (455)
T 1ebd_A 311 PGPALAHKASYEGKVAAEAIAGHP-SAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTD 389 (455)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTSCC-CCCCCSCCCEEECSSSCEEEEECCHHHHHTTTCCEEEEEEEGGGCHHHHHHTCCC
T ss_pred CCcccHHHHHHHHHHHHHHHcCCC-ccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCc
Confidence 998999999999999999999854 3456788999999999999999999999988878998888888877776667788
Q ss_pred EEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHH
Q 008841 464 IFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525 (551)
Q Consensus 464 ~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 525 (551)
+|+|+++|+++|+|+|+|++|+++.|+|+.+++||++++|++||.+++++|||++|.+.++.
T Consensus 390 ~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 451 (455)
T 1ebd_A 390 GFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAA 451 (455)
T ss_dssp CEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHHHHHHH
T ss_pred EEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988754
No 22
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-69 Score=577.63 Aligned_cols=444 Identities=24% Similarity=0.368 Sum_probs=399.5
Q ss_pred CccEEEECCChHHHHHHHHHHhC---CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 72 DFDLFTIGAGSGGVRASRFAANF---GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~---G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
+|||+|||||++|+++|.+|++. |++|+||| +..+||+|.+.||+|++.++..+...+.+..+..+|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE----------~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g 71 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVID----------CDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLG 71 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEE----------SSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEe----------CCCcCCcccCcCccchHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999998 99999999 444999999999999999998888777777777777
Q ss_pred ccc-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC------CEEEE---cCE--EEEeCeEEEc
Q 008841 149 WKY-GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP------HTVDV---DGK--LYSARHILIS 216 (551)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~------~~v~v---~g~--~~~~d~lviA 216 (551)
+.. .....++|..+..+..+....+...+...+++.+++++.+++.++++ ..+.+ +++ .+.||++|+|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviA 151 (499)
T 1xdi_A 72 FHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVA 151 (499)
T ss_dssp BC------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEEC
T ss_pred CccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEc
Confidence 752 23456789999988888888887778888888999999999888887 66666 454 7999999999
Q ss_pred CCCCCCCCCCCCCC--ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHH
Q 008841 217 VGGRPFIPDIPGSE--YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAE 294 (551)
Q Consensus 217 tG~~p~~p~i~g~~--~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~ 294 (551)
||++|..|+++|.+ .++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++.+++++.+.+.+
T Consensus 152 TGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~ 231 (499)
T 1xdi_A 152 TGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEE 231 (499)
T ss_dssp CCEEECCCGGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHH
Confidence 99999999888864 3788889988888899999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCC
Q 008841 295 QMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVP 374 (551)
Q Consensus 295 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 374 (551)
.+++.||+++++++|++++.++++ +.|.+.+|+++++|.||+|+|++|++++++++.+|++++++|+|.||+++||+.|
T Consensus 232 ~l~~~GV~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~ 310 (499)
T 1xdi_A 232 SFAERGVRLFKNARAASVTRTGAG-VLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLAT 310 (499)
T ss_dssp HHHHTTCEEETTCCEEEEEECSSS-EEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSST
T ss_pred HHHHCCCEEEeCCEEEEEEEeCCE-EEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcccCCC
Confidence 999999999999999999987666 7788888989999999999999999998777889999998899999999999999
Q ss_pred cEEEeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcc
Q 008841 375 SIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLK 454 (551)
Q Consensus 375 ~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~ 454 (551)
+|||+|||++.+++++.|..||+++|.||+|......+|..+|+++|++|+++++|++|++|++.+.++.+...++....
T Consensus 311 ~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~ 390 (499)
T 1xdi_A 311 GIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNA 390 (499)
T ss_dssp TEEECSGGGTSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSSCEEEEEEESTTSH
T ss_pred CEEEEeccCCCcccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCCCEEEEEEecCccc
Confidence 99999999999899999999999999999986434556888999999999999999999999999888999888888888
Q ss_pred cccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 455 ATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 455 ~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
++...+.+.+|+|+++|+++|+|+|++++|+.+.|+|+.+++||++++|++||.+++++|||++|.+.++..
T Consensus 391 ~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 462 (499)
T 1xdi_A 391 RAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAAR 462 (499)
T ss_dssp HHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCCSSSTHHHHHHHHH
T ss_pred ceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHH
Confidence 877677788999999998899999999999999999999999999999999999999999999999876543
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.8e-69 Score=574.11 Aligned_cols=445 Identities=28% Similarity=0.420 Sum_probs=397.7
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhh--hccCCC
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFD--ESNGFG 148 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~--~~~~~g 148 (551)
.+|||+|||||+||+++|..|++.|++|+|||+ ...+||+|.+.||+|++.++..++..+.+. .+..+|
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~---------~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g 75 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEK---------NETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRG 75 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeC---------CCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCc
Confidence 358999999999999999999999999999992 347999999999999999988877766665 566677
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---c-C-EEEEeCeEEEcCCCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---D-G-KLYSARHILISVGGRPFI 223 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~-g-~~~~~d~lviAtG~~p~~ 223 (551)
+... ...++|..+..+..+..+.+...+...+++.+++++.+++.+++++.+.+ + + +.+.||+||+|||++|..
T Consensus 76 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 76 IEMS-EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp EEES-CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred cccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC
Confidence 7532 34678999998888888888777778888899999999988888888777 3 4 679999999999999999
Q ss_pred CCCCCCC--ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC-CCCHHHHHHHHHHHHhcC
Q 008841 224 PDIPGSE--YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR-GFDEDIRDFVAEQMSLRG 300 (551)
Q Consensus 224 p~i~g~~--~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~G 300 (551)
|+++|.+ .++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++ .+++++.+.+.+.+++.|
T Consensus 155 p~i~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 234 (474)
T 1zmd_A 155 FPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQG 234 (474)
T ss_dssp CTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCcEEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCC
Confidence 9999875 3789999988888899999999999999999999999999999999999999 799999999999999999
Q ss_pred cEEEcCcccEEEEEcCCceEEEEE-----CCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCc
Q 008841 301 IEFHTEESPQAILKSTDGSLSVKT-----NKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPS 375 (551)
Q Consensus 301 v~i~~~~~v~~i~~~~~~~~~V~~-----~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 375 (551)
|+++++++|++++.++++.+.+.+ .+++++++|.||+|+|++|++++++++.++++++++|+|.||+++||+.|+
T Consensus 235 v~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~ 314 (474)
T 1zmd_A 235 FKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPN 314 (474)
T ss_dssp CEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTT
T ss_pred CEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCC
Confidence 999999999999886654245553 466789999999999999999987678889999988999999999999999
Q ss_pred EEEeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCccc
Q 008841 376 IWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKA 455 (551)
Q Consensus 376 vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~ 455 (551)
|||+|||++.+++++.|..||+++|.||+|.. ...+|..+|+++|++|+++++|++|++|++.+.++.+...++....+
T Consensus 315 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~ 393 (474)
T 1zmd_A 315 IYAIGDVVAGPMLAHKAEDEGIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSR 393 (474)
T ss_dssp EEECGGGSSSCCCHHHHHHHHHHHHHHHTTCC-CCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHH
T ss_pred EEEeeecCCCCccHHHHHHHHHHHHHHhcCCC-CcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEEecccchh
Confidence 99999999999999999999999999999864 34578889999999999999999999999888889998888888888
Q ss_pred ccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 456 TLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 456 ~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
+...+.+.+|+|+++|+++|+|+|+|++|+.+.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 394 ~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 464 (474)
T 1zmd_A 394 AKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANL 464 (474)
T ss_dssp HHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTCTHHHHHHHHH
T ss_pred hhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHH
Confidence 77667778999999999899999999999999999999999999999999999999999999999887654
No 24
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=2.2e-69 Score=571.93 Aligned_cols=442 Identities=28% Similarity=0.396 Sum_probs=393.5
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhh-hccCCCcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFD-ESNGFGWK 150 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~-~~~~~g~~ 150 (551)
++||+|||||+||+++|..|++.|++|+||| +..+||+|.+.||+|++.++......+.+. ....+++.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE----------~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~ 72 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVE----------PKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS 72 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEe----------CCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5899999999999999999999999999999 447899999999999999988777666655 55566766
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGRPFIPD 225 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p~~p~ 225 (551)
....++|..+..+.......+...+...+.+.+++++.+++..++++.+.+ ++ +.+.||+||+|||++|..|+
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~ 150 (464)
T 2a8x_A 73 --GEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVP 150 (464)
T ss_dssp --ECCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCT
T ss_pred --CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCC
Confidence 335678888887777777777777777788889999999888888877776 46 78999999999999999998
Q ss_pred CCCCCc-eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEE
Q 008841 226 IPGSEY-AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFH 304 (551)
Q Consensus 226 i~g~~~-~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 304 (551)
++|.+. ++++++.+.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.+++.||+++
T Consensus 151 ~~g~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 230 (464)
T 2a8x_A 151 GTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTIL 230 (464)
T ss_dssp TCCCBTTEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCCceEEecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEE
Confidence 888653 7888898888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccEEEEEcCCceEEEEEC-CC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCc
Q 008841 305 TEESPQAILKSTDGSLSVKTN-KG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGD 381 (551)
Q Consensus 305 ~~~~v~~i~~~~~~~~~V~~~-~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD 381 (551)
++++|++++.++++ +.+.+. +| +++++|.||+|+|++|++++++++.++++++++|+|.||+++||+.|+|||+||
T Consensus 231 ~~~~v~~i~~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD 309 (464)
T 2a8x_A 231 TATKVESIADGGSQ-VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGD 309 (464)
T ss_dssp CSCEEEEEEECSSC-EEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGG
T ss_pred eCcEEEEEEEcCCe-EEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeEC
Confidence 99999999887655 666664 66 679999999999999999987778889999988999999999999999999999
Q ss_pred CCCCCCChHHHHHhHHHHHHHHcCCCCCC-CCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcccccccC
Q 008841 382 VTDRINLTPVALMEGGALAKTLFQAEPTK-PDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGL 460 (551)
Q Consensus 382 ~~~~~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 460 (551)
|++.+++++.|..||+++|.||+|..... .+|..+|+++|++|+++++|++|++|++.+.++.+...++....++...+
T Consensus 310 ~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 389 (464)
T 2a8x_A 310 VNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVG 389 (464)
T ss_dssp GGCSSCSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHT
T ss_pred cCCCccCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCCCEEEEEEEcchhhhhhhcC
Confidence 99998999999999999999999833333 56788999999999999999999999998888998888888888876667
Q ss_pred CCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 461 PDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 461 ~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
.+.+|+|+++|+++|+|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 390 ~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 455 (464)
T 2a8x_A 390 DPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFH 455 (464)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTHHHHHHHH
T ss_pred CCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999999999999999999887543
No 25
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-68 Score=567.31 Aligned_cols=444 Identities=27% Similarity=0.428 Sum_probs=393.9
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhh-ccCCCc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDE-SNGFGW 149 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~-~~~~g~ 149 (551)
.+|||+|||||++|+++|..|++.|++|+|||+ ...+||+|.+.||+|++.++......+.+.. +..+|+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~---------~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~ 75 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEK---------RGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGV 75 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEEC---------SSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeC---------CCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCc
Confidence 468999999999999999999999999999993 3478999999999999998887766665554 555565
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGRPFIP 224 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p~~p 224 (551)
... ...++|..+..+.....+.+...+...+.+.+++++.+++..+++..+.+ ++ ..+.||++|+|||++|..|
T Consensus 76 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 76 KVS-NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp EES-CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred ccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 532 34568888888887777777777777778889999999888888888877 45 7899999999999999999
Q ss_pred CCCCCC--ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcE
Q 008841 225 DIPGSE--YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIE 302 (551)
Q Consensus 225 ~i~g~~--~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 302 (551)
+++|.+ .++++++++.+...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.+++++.+.+.+.+++.||+
T Consensus 155 ~~~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~ 234 (470)
T 1dxl_A 155 PGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMK 234 (470)
T ss_dssp TTBCCCSSSEECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCC
T ss_pred CCCCCCcccEEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCE
Confidence 988865 488889998888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcccEEEEEcCCceEEEEEC---CC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEE
Q 008841 303 FHTEESPQAILKSTDGSLSVKTN---KG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIW 377 (551)
Q Consensus 303 i~~~~~v~~i~~~~~~~~~V~~~---~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vy 377 (551)
++++++|++++.++++ +.+.+. +| +++++|.||+|+|++|++++++++.++++++++|+|.||+++||+.|+||
T Consensus 235 i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iy 313 (470)
T 1dxl_A 235 FKLKTKVVGVDTSGDG-VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVY 313 (470)
T ss_dssp EECSEEEEEEECSSSS-EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEE
T ss_pred EEeCCEEEEEEEcCCe-EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCEE
Confidence 9999999999876655 556654 44 67999999999999999998777888999998899999999999999999
Q ss_pred EeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCccccc
Q 008841 378 AVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATL 457 (551)
Q Consensus 378 a~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~ 457 (551)
|+|||++.+++++.|..||+++|.||+|.. ...+|..+|+++|++|+++++|++|++|++.+.++.+...++....++.
T Consensus 314 a~GD~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 392 (470)
T 1dxl_A 314 AIGDVIPGPMLAHKAEEDGVACVEYLAGKV-GHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAK 392 (470)
T ss_dssp ECSTTSSSCCCHHHHHHHHHHHHHHHTTSC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHH
T ss_pred EEeccCCCCccHHHHHHHHHHHHHHHcCCC-cCCCCCCCCEEEECCCceEEEcCCHHHHHhcCCcEEEEEEecccchHHH
Confidence 999999988999999999999999999854 3456788999999999999999999999998888998888888877776
Q ss_pred ccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 458 SGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 458 ~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
..+.+.+|+|+++|+++|+|+|+|++|+.+.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 393 ~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 461 (470)
T 1dxl_A 393 AIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAM 461 (470)
T ss_dssp HHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHH
T ss_pred hcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHH
Confidence 667778999999999999999999999999999999999999999999999999999999999877543
No 26
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=6.8e-68 Score=560.94 Aligned_cols=443 Identities=29% Similarity=0.444 Sum_probs=391.0
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCC-
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGF- 147 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~- 147 (551)
|+.++||+|||||++|+++|.+|++.|++|+||| +..+||+|.|.||+|++.++..+.........+.+
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie----------~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~ 70 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIE----------RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDG 70 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEE----------SSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEe----------CCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcC
Confidence 4456999999999999999999999999999999 55789999999999999998887766666656655
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHH-HHHHHHHhC-CeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCC
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTG-IYKNILINA-GITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGR 220 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~ 220 (551)
|+.. .....++..+..+..+....+.. .+...+++. +++++.+++.+++++.+.+ ++ +.+.||++|+|||++
T Consensus 71 g~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~ 149 (467)
T 1zk7_A 71 GIAA-TVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGAS 149 (467)
T ss_dssp TSCC-CCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEE
T ss_pred CccC-CCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCC
Confidence 5432 24567888888777666665543 344566777 9999999999999888777 56 789999999999999
Q ss_pred CCCCCCCCCCc--eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHh
Q 008841 221 PFIPDIPGSEY--AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSL 298 (551)
Q Consensus 221 p~~p~i~g~~~--~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 298 (551)
|+.|++||.+. +++.++++++...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++ +++++.+.+.+.+++
T Consensus 150 p~~p~i~G~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~ 228 (467)
T 1zk7_A 150 PAVPPIPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRA 228 (467)
T ss_dssp ECCCCCTTTTTSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCcCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHHHHHHHHHHHh
Confidence 99999999753 678888988888899999999999999999999999999999999999999 999999999999999
Q ss_pred cCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEE
Q 008841 299 RGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWA 378 (551)
Q Consensus 299 ~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya 378 (551)
.||+++++++|++++.+++. +.|.+. +.++++|.||+|+|++|+++++.++..+++++++|+|.||+++||+.|+|||
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~-~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya 306 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGE-FVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYA 306 (467)
T ss_dssp TTCEEETTCCEEEEEEETTE-EEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred CCCEEEcCCEEEEEEEeCCE-EEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEE
Confidence 99999999999999876544 567776 4579999999999999999876678889999988999999999999999999
Q ss_pred eCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcccccc
Q 008841 379 VGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLS 458 (551)
Q Consensus 379 ~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~ 458 (551)
+|||+..+.+++.|..||+++|.||++.+ ...++..+|+++|++|+++++|+++++|+..+.++.+...++....+++.
T Consensus 307 ~GD~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~ 385 (467)
T 1zk7_A 307 AGDCTDQPQFVYVAAAAGTRAAINMTGGD-AALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALA 385 (467)
T ss_dssp CSTTBSSCCCHHHHHHHHHHHHHHHTTCC-CCCCCTTCEEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHH
T ss_pred EeccCCCcccHHHHHHHHHHHHHHHcCCC-cccCCCCCCEEEecCCceEEEecCHHHHHhcCCCeEEEEEecccchhhhh
Confidence 99999999999999999999999999863 34667889999999999999999999999888788888888877777766
Q ss_pred cCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 459 GLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 459 ~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
...+.+|+|+++|+++|+|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|++.++..
T Consensus 386 ~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 453 (467)
T 1zk7_A 386 NFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQ 453 (467)
T ss_dssp TTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTTHHHHHHHH
T ss_pred cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHH
Confidence 67778999999999999999999999999999999999999999999999999999999999887654
No 27
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.2e-68 Score=560.50 Aligned_cols=438 Identities=28% Similarity=0.435 Sum_probs=393.1
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccC---CC
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNG---FG 148 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~---~g 148 (551)
+|||+|||||+||++||.+|++.|++|+||| ++.+||+|.+.||+|+|.++..++..+.+..+.. +|
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie----------~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g 74 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVE----------GQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLG 74 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEEC----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEc----------cCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccC
Confidence 5899999999999999999999999999999 5779999999999999999988887777776666 77
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEEEeCeEEEcCCCCCCCCC-CC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPD-IP 227 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~~~d~lviAtG~~p~~p~-i~ 227 (551)
+... ...++|..+..+..+..+++.......+++.+++++.+++.+++++++.++++.+.||+||||||++|+.|+ ++
T Consensus 75 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~~~~d~lviATGs~p~~~~~~~ 153 (458)
T 1lvl_A 75 ISVA-SPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSSSVELPMLP 153 (458)
T ss_dssp CCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETTEEEECSEEEECCCEEECCBTTBC
T ss_pred cccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEeeEEEEeCEEEEeCCCCCCCCCCCC
Confidence 7653 467899999999988888888888888889999999999888999999986688999999999999998776 66
Q ss_pred CCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 008841 228 GSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEE 307 (551)
Q Consensus 228 g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~ 307 (551)
....++++++.+.+...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.+++++.+.+.+.+++.||++++++
T Consensus 154 ~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~ 233 (458)
T 1lvl_A 154 LGGPVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGH 233 (458)
T ss_dssp CBTTEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTC
T ss_pred ccCcEecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECC
Confidence 33357888999888888999999999999999999999999999999999999998999999999999999999999999
Q ss_pred ccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCC
Q 008841 308 SPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDR 385 (551)
Q Consensus 308 ~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~ 385 (551)
+|++++. ++ +.+...+| +++++|.||+|+|++|++++++++..|++++++ +|.||+++||+.|+|||+|||++.
T Consensus 234 ~v~~i~~--~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~GD~~~~ 309 (458)
T 1lvl_A 234 SVEGYEN--GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMHNVWAIGDVAGE 309 (458)
T ss_dssp EEEEEET--TE-EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSSTTEEECGGGGCS
T ss_pred EEEEEEe--CC-EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCCCEEEeeccCCC
Confidence 9999976 33 55554456 579999999999999999876678889999887 899999999999999999999999
Q ss_pred CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcccccccCCCcEE
Q 008841 386 INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIF 465 (551)
Q Consensus 386 ~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (551)
+++++.|..||+++|.||+|.. ...++..+|+++|++|+++++|++|++|++.+.++.+...++....++...+.+.+|
T Consensus 310 ~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 388 (458)
T 1lvl_A 310 PMLAHRAMAQGEMVAEIIAGKA-RRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGF 388 (458)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCC-CCCCCSCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCE
T ss_pred cccHHHHHHHHHHHHHHhcCCC-ccCCCCCCCEEEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcEE
Confidence 9999999999999999999854 345677899999999999999999999999887888888777777776656677899
Q ss_pred EEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHH
Q 008841 466 MKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525 (551)
Q Consensus 466 ~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 525 (551)
+|+++|+++++|+|++++|+.+.|+|+.++++|++|+|++||.+++++|||++|.+.++.
T Consensus 389 ~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~ 448 (458)
T 1lvl_A 389 VRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAA 448 (458)
T ss_dssp EEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHHHHHHH
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987654
No 28
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.4e-68 Score=572.81 Aligned_cols=443 Identities=23% Similarity=0.357 Sum_probs=383.8
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
+..++||+|||||++|+++|.+|++.|++|+|||+ ...+||+|.+.||+|++.++..+.....+.+...|+
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~---------~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g 110 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDR---------WPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQY 110 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTST
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeC---------CCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcC
Confidence 44569999999999999999999999999999992 333899999999999999988887777777777776
Q ss_pred cccCCCC--CCChHHHHHHHHHHHHHHHHHHH---HHH-----HhCCeEEE-EeEEEEecCCEEEEcCEEEEeCeEEEcC
Q 008841 149 WKYGTEP--QHDWSTLIANKNAELQRLTGIYK---NIL-----INAGITLI-EGRGKIVDPHTVDVDGKLYSARHILISV 217 (551)
Q Consensus 149 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~v~~~-~~~~~~i~~~~v~v~g~~~~~d~lviAt 217 (551)
+ +.... .+.... ....+...+. ..+ .+.+++++ .+++.+++++++.++++.+.||++|+||
T Consensus 111 ~-~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~g~~~~~d~lViAT 182 (523)
T 1mo9_A 111 W-FPDMTEKVVGIKE-------VVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAV 182 (523)
T ss_dssp T-CCCCTTCCCCHHH-------HHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEETTEEEEBSCEEECC
T ss_pred c-HHHHHhhhhhHHH-------HHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEECCEEEEeCEEEECC
Confidence 5 11100 011222 2233322222 445 67799998 8888889988888888889999999999
Q ss_pred CCCCCCCCCCCCCc--eecchhhh-cCCCCC-CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHH
Q 008841 218 GGRPFIPDIPGSEY--AIDSDAAL-DLPSKP-EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVA 293 (551)
Q Consensus 218 G~~p~~p~i~g~~~--~~~~~~~~-~~~~~~-~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~ 293 (551)
|++|..|+++|.+. ++++++++ .+...+ ++++|||+|++|+|+|..|.++|.+|+++++.+.+++.+++++.+.+.
T Consensus 183 Gs~p~~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~ 262 (523)
T 1mo9_A 183 GAGPGTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVL 262 (523)
T ss_dssp CEECCCCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHH
T ss_pred CCCCCCCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHH
Confidence 99999999999764 78888888 887778 999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcEEEcCcccEEEEEcCCce---EEEEECCCe-EEEeeEEEEecCcCCCCC-CCCccccCeeecCCCCeEeCCC
Q 008841 294 EQMSLRGIEFHTEESPQAILKSTDGS---LSVKTNKGT-VDGFSHVMFATGRRPNTK-NLGLEKVGVKMTKNGAIEVDEY 368 (551)
Q Consensus 294 ~~l~~~Gv~i~~~~~v~~i~~~~~~~---~~V~~~~G~-~i~~d~vi~a~G~~p~~~-~l~l~~~gl~~~~~G~i~vd~~ 368 (551)
+.+++.||+++++++|++++.++++. +.|++.+|+ ++++|.||+|+|++|+++ + ++.+|++++++|+|.||++
T Consensus 263 ~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~--l~~~gl~~~~~G~i~Vd~~ 340 (523)
T 1mo9_A 263 DRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAEL--AKILGLDLGPKGEVLVNEY 340 (523)
T ss_dssp HHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHH--HHHHTCCBCTTSCBCCCTT
T ss_pred HHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccC--HHHcCCccCCCCCEEECCC
Confidence 99999999999999999998755542 568888887 899999999999999997 5 6788999998999999999
Q ss_pred CCCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEe
Q 008841 369 SGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTA 448 (551)
Q Consensus 369 ~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~ 448 (551)
+||+.|+|||+|||++.+++++.|..||+++|.||+|.+ ...++..+|+++|++|+++++|++|++|++.+.++.+...
T Consensus 341 ~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~ 419 (523)
T 1mo9_A 341 LQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEK-ISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKM 419 (523)
T ss_dssp SBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCC-CCCCCCSCCEEEESSSEEEEEECCHHHHHHTTCCEEEEEE
T ss_pred CccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC-CCCCCCCCCeEEECCCceEEEeCCHHHHHhCCCCEEEEEE
Confidence 999999999999999988999999999999999999854 3345778999999999999999999999999888888887
Q ss_pred eccC--------------ccccccc--CCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccC--
Q 008841 449 NFRP--------------LKATLSG--LPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDAT-- 510 (551)
Q Consensus 449 ~~~~--------------~~~~~~~--~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~-- 510 (551)
++.. +.+++.. +.+.+|+|+++|+++|+|||+|++|+.+.|+|+.+++||++++|++||.++
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~ 499 (523)
T 1mo9_A 420 PPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDE 499 (523)
T ss_dssp SCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTSCC
T ss_pred ecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHhCCc
Confidence 7765 5566555 567899999999999999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHHHHhhhhhh
Q 008841 511 VGVHPTAAEEFVTLRTPTRKI 531 (551)
Q Consensus 511 ~~~~pt~~e~~~~~~~~~~~~ 531 (551)
+++|||++|.+.+++...|++
T Consensus 500 ~~~~Pt~~e~~~~~~~~~~~~ 520 (523)
T 1mo9_A 500 LFLNPTHFIQLSRLRAGSKNL 520 (523)
T ss_dssp CSSCSCCHHHHHHHHTTCSSC
T ss_pred ceECCCHHHHHHHHHHhhHhh
Confidence 999999999999888877765
No 29
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=4.1e-67 Score=553.16 Aligned_cols=442 Identities=29% Similarity=0.429 Sum_probs=397.1
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||+|||||+||+++|.+|++.|++|+|||+ ...+||+|.+.||+|++.++..++..+.+.. ..+|+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~---------~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~ 70 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEK---------EKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKV 70 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEE
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeC---------CCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCccc
Confidence 38999999999999999999999999999992 3479999999999999999988877777666 6777764
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE--cCEEEEeCeEEEcCCCCCCCCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV--DGKLYSARHILISVGGRPFIPDIPGS 229 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v--~g~~~~~d~lviAtG~~p~~p~i~g~ 229 (551)
. ....+|..+..+.....+.+...+...+++.+++++.+++.+++++.+.+ +++.+.||+||+|||++|..|+++|.
T Consensus 71 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~ 149 (455)
T 2yqu_A 71 K-GVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQV 149 (455)
T ss_dssp C-CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCC
T ss_pred C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCC
Confidence 3 35678999888888777777777777788889999999988888888888 36789999999999999999998886
Q ss_pred C--ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 008841 230 E--YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEE 307 (551)
Q Consensus 230 ~--~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~ 307 (551)
+ .++++++++.+...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.+++++.+.+.+.+++.||++++++
T Consensus 150 ~~~~v~~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~ 229 (455)
T 2yqu_A 150 DYERVVTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGV 229 (455)
T ss_dssp CSSSEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CcCcEechHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECC
Confidence 5 47888999888888999999999999999999999999999999999999998999999999999999999999999
Q ss_pred ccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCCCC
Q 008841 308 SPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRIN 387 (551)
Q Consensus 308 ~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~~~ 387 (551)
+|++++.++++ +.+.+.+|+++++|.||+|+|++|++++++++..+++++++|+|.||+++||+.|+|||+|||+..++
T Consensus 230 ~V~~i~~~~~~-v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~ 308 (455)
T 2yqu_A 230 RVTAVVPEAKG-ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGPM 308 (455)
T ss_dssp CEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSCC
T ss_pred EEEEEEEeCCE-EEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCCcc
Confidence 99999887655 77888888889999999999999999887678889999888999999999999999999999999999
Q ss_pred ChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCcccccccCCCcEEEE
Q 008841 388 LTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMK 467 (551)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 467 (551)
+++.|..||+++|+||+|.. ...++..+|++.|++|+++++|++++++++.+.++.+....+....++...+.+.+|+|
T Consensus 309 ~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k 387 (455)
T 2yqu_A 309 LAHKASEEGIAAVEHMVRGF-GHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIK 387 (455)
T ss_dssp CHHHHHHHHHHHHHHHHHSC-CCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHHTCCCCEEE
T ss_pred CHHHHHHhHHHHHHHHcCCC-ccCCCCCCCEEEEcCCceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhcCCCcEEEE
Confidence 99999999999999999854 34567788999999999999999999999988888888888877777766667789999
Q ss_pred EEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHHh
Q 008841 468 LVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLRT 526 (551)
Q Consensus 468 l~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 526 (551)
+++|+++|+|+|++++|+.+.|+|+.++++|++|+|++||.+++++|||++|.+.++..
T Consensus 388 ~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~ 446 (455)
T 2yqu_A 388 VLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAAL 446 (455)
T ss_dssp EEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHH
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 99999899999999999999999999999999999999999999999999999877543
No 30
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=3.6e-67 Score=557.24 Aligned_cols=445 Identities=27% Similarity=0.426 Sum_probs=388.3
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhh-hccCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFD-ESNGF 147 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~-~~~~~ 147 (551)
|..++||+|||||++|+++|..|++.|++|+|||+ ...+||+|.+.||+|++.++......+.+. .+..+
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~---------~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~ 72 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEK---------RGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKR 72 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGG
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEec---------CCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34468999999999999999999999999999993 367899999999999999988777666555 45566
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EE------EEeCeEEEc
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KL------YSARHILIS 216 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~------~~~d~lviA 216 (551)
|+.......+++..+..+.....+.+...+...+++.+++++.+++.+.++..+.+ ++ +. +.||+||+|
T Consensus 73 gi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViA 152 (478)
T 1v59_A 73 GIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVA 152 (478)
T ss_dssp TEEECSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEEC
T ss_pred CcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEEC
Confidence 66542234678888888887777777777777888899999999888888777776 34 45 999999999
Q ss_pred CCCCCCCCCCCCC----CceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHH
Q 008841 217 VGGRPFIPDIPGS----EYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFV 292 (551)
Q Consensus 217 tG~~p~~p~i~g~----~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l 292 (551)
||++|. .+||. ..++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+
T Consensus 153 tGs~p~--~~~g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l 230 (478)
T 1v59_A 153 TGSEVT--PFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKAT 230 (478)
T ss_dssp CCEEEC--CCTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHH
T ss_pred cCCCCC--CCCCCCCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHH
Confidence 999884 23443 247888999888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEcCcccEEEEE--cCCceEEEEEC-----CCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEe
Q 008841 293 AEQMSLRGIEFHTEESPQAILK--STDGSLSVKTN-----KGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEV 365 (551)
Q Consensus 293 ~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~V~~~-----~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~v 365 (551)
.+.+++.||+++++++|+++.. +++. +.+.+. +++++++|.||+|+|++|+++.+.++..|++++++|+|.|
T Consensus 231 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~v 309 (478)
T 1v59_A 231 QKFLKKQGLDFKLSTKVISAKRNDDKNV-VEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVI 309 (478)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCC
T ss_pred HHHHHHCCCEEEeCCEEEEEEEecCCCe-EEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeE
Confidence 9999999999999999999987 4433 566665 4567999999999999999984447889999998999999
Q ss_pred CCCCCCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeEE
Q 008841 366 DEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV 445 (551)
Q Consensus 366 d~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~~ 445 (551)
|+++||+.|+|||+|||++.+++++.|..||+++|+||++.+ ...+|..+|+++|++|+++++|++|++|++.+.++.+
T Consensus 310 d~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~ 388 (478)
T 1v59_A 310 DDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGH-GHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKI 388 (478)
T ss_dssp CTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEE
T ss_pred CcCCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCC-CCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCCCEEE
Confidence 999999999999999999999999999999999999999854 3457888999999999999999999999988878888
Q ss_pred EEeeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHH
Q 008841 446 FTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525 (551)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 525 (551)
...++....++...+.+.+|+|+++++++|+|+|++++|+.+.|+|+.++.+|++++|++||.+++++|||++|.+.++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 468 (478)
T 1v59_A 389 GKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEAN 468 (478)
T ss_dssp EEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCTTHHHHHHH
T ss_pred EEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCCHHHHHHHHH
Confidence 88888877777666667899999999889999999999999999999999999999999999999999999999987754
Q ss_pred h
Q 008841 526 T 526 (551)
Q Consensus 526 ~ 526 (551)
.
T Consensus 469 ~ 469 (478)
T 1v59_A 469 M 469 (478)
T ss_dssp H
T ss_pred H
Confidence 3
No 31
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=1.1e-65 Score=560.02 Aligned_cols=453 Identities=40% Similarity=0.710 Sum_probs=387.2
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.+|||+|||||+||++||.+|++.|++|+|||+.... .......+||+|.+.||+|++.+...+.....+.+...||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~-~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPT-PIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCC-TTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCc-ccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 4699999999999999999999999999999931000 001123589999999999999998888777777777888876
Q ss_pred cCCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE---cC--EEEEeCeEEEcCCCCCCCC
Q 008841 151 YGTE-PQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGRPFIP 224 (551)
Q Consensus 151 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p~~p 224 (551)
.... ...+|..+..+....++.+...+...+...+|+++.+.+.+++.+.+.+ ++ ..+.||+||||||++|+.|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p 264 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYP 264 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCC
Confidence 5432 5689999999888888877766666677889999999999999998887 34 5799999999999999999
Q ss_pred CCCCCC-ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEE
Q 008841 225 DIPGSE-YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF 303 (551)
Q Consensus 225 ~i~g~~-~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 303 (551)
++||.+ ..++.++++.+...+++++|||+|++|+|+|..|+++|.+|+++++. .+++.+++++.+.+.+.+++.||++
T Consensus 265 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i 343 (598)
T 2x8g_A 265 EIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKF 343 (598)
T ss_dssp SSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEE
Confidence 999964 45677888887778899999999999999999999999999999998 6778899999999999999999999
Q ss_pred EcCcccEEEEEc-----CC---ceEEE--EECCCeEEE--eeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCC
Q 008841 304 HTEESPQAILKS-----TD---GSLSV--KTNKGTVDG--FSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGT 371 (551)
Q Consensus 304 ~~~~~v~~i~~~-----~~---~~~~V--~~~~G~~i~--~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t 371 (551)
++++.++++... ++ +.+.+ .+.+|++++ +|.||+|+|++|+++++.++..|++++++|+|.||+++||
T Consensus 344 ~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t 423 (598)
T 2x8g_A 344 AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQT 423 (598)
T ss_dssp EETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSBC
T ss_pred EECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCcC
Confidence 999988888642 11 32333 356787655 9999999999999988767888999999999999999999
Q ss_pred CCCcEEEeCcCC-CCCCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCC--CeEEEEe
Q 008841 372 AVPSIWAVGDVT-DRINLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTA 448 (551)
Q Consensus 372 ~~~~vya~GD~~-~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~--~~~~~~~ 448 (551)
+.|+|||+|||+ +.+.+++.|..||+++|.||++......+|..+|+++|++|+++++|++|++|++.++ ++.++..
T Consensus 424 s~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~ 503 (598)
T 2x8g_A 424 TVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHS 503 (598)
T ss_dssp SSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEE
T ss_pred CCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEECCCceEEEeCCHHHHHhhCCCCcEEEEEE
Confidence 999999999995 4578999999999999999998766667888999999999999999999999988743 4888887
Q ss_pred eccCcccccccC-CCcEEEEEEEEC-CCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHHHH
Q 008841 449 NFRPLKATLSGL-PDRIFMKLVLCA-KTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVTLR 525 (551)
Q Consensus 449 ~~~~~~~~~~~~-~~~~~~kl~~~~-~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 525 (551)
+|.+..++...+ ...+|+|+++++ ++|+|+|+|++|+++.|+|+.+++||++++|++||.+++++|||++|.+.++.
T Consensus 504 ~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 582 (598)
T 2x8g_A 504 NFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLH 582 (598)
T ss_dssp EECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCC
T ss_pred eccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCCHHHHHHHHH
Confidence 888777766543 367999999995 69999999999999999999999999999999999999999999999877644
No 32
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=4.6e-60 Score=495.37 Aligned_cols=401 Identities=16% Similarity=0.219 Sum_probs=313.7
Q ss_pred cEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 74 DLFTIGAGSGGVRASRFAANFG--ASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 74 dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||||||+||++||.+|++.| .+|+|||+ .... +....|+|... ..... . ...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~---------~~~~---~~~~~~l~~~~----~~~~~---~-~~~---- 57 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK---------DRDM---SFANCALPYVI----GEVVE---D-RRY---- 57 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES---------SSCS---SBCGGGHHHHH----TTSSC---C-GGG----
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC---------CCCC---CCCcchhHHHH----cCCcc---c-hhh----
Confidence 6999999999999999999977 57999993 1111 11222344211 00000 0 000
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC--CEEEE------cCEEEEeCeEEEcCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP--HTVDV------DGKLYSARHILISVGGRPF 222 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~--~~v~v------~g~~~~~d~lviAtG~~p~ 222 (551)
...... +.++++.+++++.+ ++..++. +.+.+ ++..+.||+||||||++|+
T Consensus 58 --~~~~~~------------------~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 58 --ALAYTP------------------EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp --TBCCCH------------------HHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred --hhhcCH------------------HHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccc
Confidence 000011 12334558998776 4666654 44444 2347899999999999999
Q ss_pred CCCCCCCCc--eecchhhhcCC-----CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHH
Q 008841 223 IPDIPGSEY--AIDSDAALDLP-----SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQ 295 (551)
Q Consensus 223 ~p~i~g~~~--~~~~~~~~~~~-----~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 295 (551)
.|+++|... ..+.++...++ ..+++++|||+|++|+|+|..++++|.+||++++.+++++.+++++.+.+.+.
T Consensus 118 ~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~ 197 (437)
T 4eqs_A 118 SLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDE 197 (437)
T ss_dssp CCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHH
T ss_pred cccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHH
Confidence 999988532 22333333322 24789999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCc
Q 008841 296 MSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPS 375 (551)
Q Consensus 296 l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 375 (551)
++++||+++++++|++++.+ .+.+.+|+++++|.|++|+|++||+++ ++..|++++++|+|.||+++||++||
T Consensus 198 l~~~gV~i~~~~~v~~~~~~-----~v~~~~g~~~~~D~vl~a~G~~Pn~~~--~~~~gl~~~~~G~I~vd~~~~Ts~p~ 270 (437)
T 4eqs_A 198 LDKREIPYRLNEEINAINGN-----EITFKSGKVEHYDMIIEGVGTHPNSKF--IESSNIKLDRKGFIPVNDKFETNVPN 270 (437)
T ss_dssp HHHTTCCEEESCCEEEEETT-----EEEETTSCEEECSEEEECCCEEESCGG--GTTSSCCCCTTSCEECCTTCBCSSTT
T ss_pred hhccceEEEeccEEEEecCC-----eeeecCCeEEeeeeEEEEeceecCcHH--HHhhhhhhccCCcEecCCCccCCCCC
Confidence 99999999999999988532 378899999999999999999999987 78889999999999999999999999
Q ss_pred EEEeCcCCCC----------CCChHHHHHhHHHHHHHHcCCCC-CCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCeE
Q 008841 376 IWAVGDVTDR----------INLTPVALMEGGALAKTLFQAEP-TKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDID 444 (551)
Q Consensus 376 vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~~ 444 (551)
|||+|||++. +++++.|.+||+++|+||+|.+. ...++..+|.+.|++|+++++|+||+||++.+ ++
T Consensus 271 IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~--~~ 348 (437)
T 4eqs_A 271 IYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFD--YK 348 (437)
T ss_dssp EEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSC--EE
T ss_pred EEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCC--ce
Confidence 9999999863 46799999999999999999765 34567788999999999999999999998764 44
Q ss_pred EEEeeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCC-hhHHHHHHHHHHHCCCCHHHHccCcc-cCCCchHHHH
Q 008841 445 VFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGED-APEIVQGFAVAVKAGLTKADFDATVG-VHPTAAEEFV 522 (551)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~-~~e~i~~~~~~i~~~~~~~~l~~~~~-~~pt~~e~~~ 522 (551)
+....+....+ +..+.+++|+||++|++|++|||+|++|++ +.|+|+.+++||++++|++||.++.+ +||++++.+.
T Consensus 349 ~~~~~~~~~~~-~~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~~d 427 (437)
T 4eqs_A 349 MVEVTQGAHAN-YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHPKD 427 (437)
T ss_dssp EEEEEEESSCT-TSSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSC
T ss_pred EEEEecCCchh-hcCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCchHH
Confidence 44433333222 234677899999999999999999999984 89999999999999999999999855 5899998654
Q ss_pred HHHhhh
Q 008841 523 TLRTPT 528 (551)
Q Consensus 523 ~~~~~~ 528 (551)
.+..++
T Consensus 428 ~v~~aa 433 (437)
T 4eqs_A 428 LINMIG 433 (437)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 433333
No 33
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=1e-58 Score=488.52 Aligned_cols=407 Identities=20% Similarity=0.283 Sum_probs=323.1
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+||+|||||+||++||.+|++. |.+|+|||+ ....| |.|+...........
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~---------~~~~g-------~~~~~~~~~~~~~~~----------- 55 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDK---------QATVG-------YLSGGLSAYFNHTIN----------- 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS---------SSCCS-------SCCC----------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC---------CCCCc-------ccCccchhhhcCCCC-----------
Confidence 6999999999999999999997 899999993 22222 222211111100000
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC--CEEEE----cCEEEEeCeEEEcCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP--HTVDV----DGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~--~~v~v----~g~~~~~d~lviAtG~~p~~ 223 (551)
++.. +.......+.+.+++++.+ ++..++. +.+.+ ++..+.||++|+|||++|..
T Consensus 56 -------~~~~-----------~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~ 117 (452)
T 3oc4_A 56 -------ELHE-----------ARYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFS 117 (452)
T ss_dssp -----------------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCC
T ss_pred -------CHHH-----------hhcCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCC
Confidence 0000 0000112345568888654 5555543 45555 56689999999999999999
Q ss_pred CCCCCCC--ceecchhhhc------CCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHHH
Q 008841 224 PDIPGSE--YAIDSDAALD------LPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVAE 294 (551)
Q Consensus 224 p~i~g~~--~~~~~~~~~~------~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~ 294 (551)
|++||.+ .+++..++.. ....+++++|||+|++|+|+|..|.++|.+|+++++.+.+++. +++++.+.+.+
T Consensus 118 p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~ 197 (452)
T 3oc4_A 118 TQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQK 197 (452)
T ss_dssp CCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHH
T ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHH
Confidence 9999975 3554443322 2235899999999999999999999999999999999999987 89999999999
Q ss_pred HHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCC
Q 008841 295 QMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVP 374 (551)
Q Consensus 295 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 374 (551)
.+++.||+++++++|++++.++++ +.|.+.+| ++++|.||+|+|++|++++ ++.. ++++++|+|.||+++||+.|
T Consensus 198 ~l~~~GV~i~~~~~v~~i~~~~~~-v~v~~~~g-~i~aD~Vv~A~G~~p~~~~--l~~~-~~~~~~g~i~vd~~~~t~~~ 272 (452)
T 3oc4_A 198 SLEKQAVIFHFEETVLGIEETANG-IVLETSEQ-EISCDSGIFALNLHPQLAY--LDKK-IQRNLDQTIAVDAYLQTSVP 272 (452)
T ss_dssp HHHTTTEEEEETCCEEEEEECSSC-EEEEESSC-EEEESEEEECSCCBCCCSS--CCTT-SCBCTTSCBCCCTTCBCSST
T ss_pred HHHHcCCEEEeCCEEEEEEccCCe-EEEEECCC-EEEeCEEEECcCCCCChHH--HHhh-hccCCCCCEEECcCccCCCC
Confidence 999999999999999999876666 57888777 7999999999999999987 3443 78888999999999999999
Q ss_pred cEEEeCcCCCC----------CCChHHHHHhHHHHHHHHcCCCCCCC-CCCCccEEEecCCceEEeeCCHHHHHhcCCCe
Q 008841 375 SIWAVGDVTDR----------INLTPVALMEGGALAKTLFQAEPTKP-DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDI 443 (551)
Q Consensus 375 ~vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~-~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~ 443 (551)
+|||+|||++. +++++.|..||+++|.||+|....+. .+..+|+.+|+ ++++++|++|+||++.+.++
T Consensus 273 ~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~-~~~a~vG~te~~a~~~g~~~ 351 (452)
T 3oc4_A 273 NVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGD-YYLASTGLTETEGLFFPQTL 351 (452)
T ss_dssp TEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEETT-EEEEEEECCSGGGGGSSSCE
T ss_pred CEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEcC-eeEEEecCCHHHHHHCCCce
Confidence 99999999985 36899999999999999998765433 56678899995 69999999999999887777
Q ss_pred EEEEeeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCHHHHccC-cccCCCchHHH
Q 008841 444 DVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGE-DAPEIVQGFAVAVKAGLTKADFDAT-VGVHPTAAEEF 521 (551)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~-~~~e~i~~~~~~i~~~~~~~~l~~~-~~~~pt~~e~~ 521 (551)
.+...++.. ++ ..+.+.+|+|+++|+++++|||+|++|+ ++.|+|+.+++||++|+|++||.++ +++|||++|.+
T Consensus 352 ~~~~~~~~~--~~-~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~ 428 (452)
T 3oc4_A 352 ASIIVRQPA--PP-LQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNIY 428 (452)
T ss_dssp EEEEEEEEC--TT-TTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCSS
T ss_pred EEEEEecCC--cc-CCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCch
Confidence 776655433 23 3456789999999999999999999999 8999999999999999999999998 89999999988
Q ss_pred HHHHhhhhhhcC
Q 008841 522 VTLRTPTRKIRK 533 (551)
Q Consensus 522 ~~~~~~~~~~~~ 533 (551)
..+..++.++.+
T Consensus 429 ~~~~~a~~~~~~ 440 (452)
T 3oc4_A 429 DITNLMGASAYW 440 (452)
T ss_dssp CHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 777776665544
No 34
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.7e-58 Score=486.59 Aligned_cols=412 Identities=25% Similarity=0.331 Sum_probs=327.6
Q ss_pred CccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
++||+|||||+||+++|..|++. |.+|+|||+ ....++. ...+|..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~---------~~~~~~~---~~~~p~~-------------------- 50 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEA---------TEWVSHA---PCGIPYV-------------------- 50 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS---------SSCCC--------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEEC---------CCccccC---CcCCccc--------------------
Confidence 47999999999999999999996 889999993 2222111 0011210
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecCCEEEE---cC-EEEEeCeEEEcCCCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDPHTVDV---DG-KLYSARHILISVGGRPFIP 224 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~~~v~v---~g-~~~~~d~lviAtG~~p~~p 224 (551)
..+ ..++..+..+. ...+.++.+++++.+ ++..++.....+ ++ ..+.||+||+|||++|+.|
T Consensus 51 -~~~--~~~~~~~~~~~----------~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 51 -VEG--LSTPDKLMYYP----------PEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp ----------------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred -cCC--CCCHHHhhhcC----------HHHHHHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 000 00111111100 011225679999988 778888765555 44 4899999999999999999
Q ss_pred CCCCCCc--ee---cchhhhcCC-----CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHH
Q 008841 225 DIPGSEY--AI---DSDAALDLP-----SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVA 293 (551)
Q Consensus 225 ~i~g~~~--~~---~~~~~~~~~-----~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~ 293 (551)
++||.+. ++ +.++...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.
T Consensus 118 ~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~ 197 (449)
T 3kd9_A 118 AIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILE 197 (449)
T ss_dssp SCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHH
T ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHH
Confidence 9999752 33 334443322 14689999999999999999999999999999999999988 9999999999
Q ss_pred HHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCC
Q 008841 294 EQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAV 373 (551)
Q Consensus 294 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~ 373 (551)
+.+++. |++++++.|.+++.++ + +...+.+|+++++|.||+|+|++|++++ ++..|++++++|+|.||+++||+.
T Consensus 198 ~~l~~~-v~i~~~~~v~~i~~~~-~-v~~v~~~g~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~~~G~i~vd~~~~t~~ 272 (449)
T 3kd9_A 198 EKLKKH-VNLRLQEITMKIEGEE-R-VEKVVTDAGEYKAELVILATGIKPNIEL--AKQLGVRIGETGAIWTNEKMQTSV 272 (449)
T ss_dssp HHHTTT-SEEEESCCEEEEECSS-S-CCEEEETTEEEECSEEEECSCEEECCHH--HHHTTCCBCTTSSBCCCTTCBCSS
T ss_pred HHHHhC-cEEEeCCeEEEEeccC-c-EEEEEeCCCEEECCEEEEeeCCccCHHH--HHhCCccCCCCCCEEECCCCccCC
Confidence 999999 9999999999998654 3 3333556778999999999999999987 678899999999999999999999
Q ss_pred CcEEEeCcCCC-------C---CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCCe
Q 008841 374 PSIWAVGDVTD-------R---INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDI 443 (551)
Q Consensus 374 ~~vya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~~ 443 (551)
|+|||+|||+. . +++++.|..||+++|+||+|....+..+...|++.|++|+++++|++|+||++.+.++
T Consensus 273 ~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~ 352 (449)
T 3kd9_A 273 ENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDV 352 (449)
T ss_dssp TTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCE
T ss_pred CCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHCCCce
Confidence 99999999984 2 5789999999999999999977655556678899999999999999999999987676
Q ss_pred EEEEeeccCccccccc-CCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccC-cccCCCchHHH
Q 008841 444 DVFTANFRPLKATLSG-LPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDAT-VGVHPTAAEEF 521 (551)
Q Consensus 444 ~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~-~~~~pt~~e~~ 521 (551)
.+.... ...++... +.+.+|+||++|+++|+|||+|++|+++.|+|+.+++||++|+|++||.++ +++||+++|.+
T Consensus 353 ~~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~ 430 (449)
T 3kd9_A 353 RTAFIK--ASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPVW 430 (449)
T ss_dssp EEEEEE--EESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCSS
T ss_pred EEEEEe--cCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCch
Confidence 655433 33444333 567899999999999999999999999999999999999999999999988 77999999999
Q ss_pred HHHHhhhhhhcCCC
Q 008841 522 VTLRTPTRKIRKSP 535 (551)
Q Consensus 522 ~~~~~~~~~~~~~~ 535 (551)
..+..++++++++.
T Consensus 431 ~~~~~~~~~~~~~~ 444 (449)
T 3kd9_A 431 DPLIVLARVLKEGH 444 (449)
T ss_dssp CHHHHHHHHHHCC-
T ss_pred hHHHHHHHHHhhcc
Confidence 88888888887653
No 35
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=2.8e-56 Score=470.03 Aligned_cols=410 Identities=21% Similarity=0.273 Sum_probs=322.3
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+||+|||||++|+++|..|++. |.+|+|||+ ....+ +.++....+..... .
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~---------~~~~~-------~~~~~~~~~~~g~~---~-------- 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEM---------NDNIS-------FLSCGIALYLGKEI---K-------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEES---------SSCCC-------BCGGGHHHHHTTCB---G--------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC---------CCCCC-------cccccchhhhcCCc---c--------
Confidence 5899999999999999999997 999999993 11111 12222111111000 0
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEec--CCEEEE-c-----CEEEEeCeEEEcCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIVD--PHTVDV-D-----GKLYSARHILISVGGRP 221 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i~--~~~v~v-~-----g~~~~~d~lviAtG~~p 221 (551)
..++..+.. .....+.+.+++++.+. +..++ .+.+.+ + +..+.||++|+|||++|
T Consensus 54 -----~~~~~~~~~-----------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 54 -----NNDPRGLFY-----------SSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp -----GGCGGGGBS-----------CCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -----cCCHHHhhh-----------cCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 001111100 01123455689987764 66664 567776 2 46899999999999999
Q ss_pred CCCCCCCCC--ceecc------hhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC-CCCHHHHHHH
Q 008841 222 FIPDIPGSE--YAIDS------DAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR-GFDEDIRDFV 292 (551)
Q Consensus 222 ~~p~i~g~~--~~~~~------~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l 292 (551)
..|++||.+ .+++. ++++.....+++++|||+|++|+|+|..|+++|.+|+++++.+.+++ .+++++.+.+
T Consensus 118 ~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l 197 (452)
T 2cdu_A 118 TVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDIL 197 (452)
T ss_dssp CCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHH
T ss_pred CCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHH
Confidence 999999874 34432 23334445689999999999999999999999999999999999998 5999999999
Q ss_pred HHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCC
Q 008841 293 AEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTA 372 (551)
Q Consensus 293 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~ 372 (551)
.+.+++.||+++++++|++++.++++...+.+ +|+++++|.||+|+|++|++++ ++.. ++++++|+|.||+++||+
T Consensus 198 ~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~l--l~~~-l~~~~~G~i~Vd~~~~t~ 273 (452)
T 2cdu_A 198 AKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPNTEL--LKGK-VAMLDNGAIITDEYMHSS 273 (452)
T ss_dssp HHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEECCGG--GTTT-SCBCTTSCBCCCTTSBCS
T ss_pred HHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCCHHH--HHHh-hhcCCCCCEEECCCcCcC
Confidence 99999999999999999999875444223444 7888999999999999999987 5666 888888999999999999
Q ss_pred CCcEEEeCcCCCC----------CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcCCC
Q 008841 373 VPSIWAVGDVTDR----------INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD 442 (551)
Q Consensus 373 ~~~vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~~~ 442 (551)
.|+|||+|||+.. +++++.|..||+++|+||+|....+..+...++..|++|+++++|+++++|++.+.+
T Consensus 274 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~ 353 (452)
T 2cdu_A 274 NRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNLK 353 (452)
T ss_dssp STTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCC
T ss_pred CCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCCc
Confidence 9999999999983 478999999999999999986544445556677777799999999999999988766
Q ss_pred eEEEEeeccCccccccc-CCCcEEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCHHHHccC-cccCCCchH
Q 008841 443 IDVFTANFRPLKATLSG-LPDRIFMKLVLCAKTNKVLGLHMCGE-DAPEIVQGFAVAVKAGLTKADFDAT-VGVHPTAAE 519 (551)
Q Consensus 443 ~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~ilG~~~~g~-~~~e~i~~~~~~i~~~~~~~~l~~~-~~~~pt~~e 519 (551)
+.+.. +....++... ..+.+|+|+++|+++|+|+|+|++|+ ++.|+|+.++++|++++|++||..+ +++|||++|
T Consensus 354 ~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e 431 (452)
T 2cdu_A 354 VSEVI--IADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDR 431 (452)
T ss_dssp CEEEE--EEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCC
T ss_pred eEEEE--EecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCc
Confidence 66553 3444444333 45679999999988999999999999 8999999999999999999999986 899999999
Q ss_pred HHHHHHhhhhhh
Q 008841 520 EFVTLRTPTRKI 531 (551)
Q Consensus 520 ~~~~~~~~~~~~ 531 (551)
.+..+..++..+
T Consensus 432 ~~~~~~~aa~~~ 443 (452)
T 2cdu_A 432 PFNYLNILGQAA 443 (452)
T ss_dssp SSCHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 888776666544
No 36
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=3.5e-57 Score=479.52 Aligned_cols=416 Identities=19% Similarity=0.249 Sum_probs=304.7
Q ss_pred CccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCC-cchHHHHHhhhhhhHhhhccCCC
Q 008841 72 DFDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGC-VPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
++||+|||||++|+++|..|++. |.+|+|||+ ...++ +..| +|..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~---------~~~~~----~~~~gl~~~------------------- 50 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQ---------ASRIS----YGGCGIPYY------------------- 50 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECC---------C------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC---------CCccc----ccccccchh-------------------
Confidence 46999999999999999999997 899999993 11111 0000 1110
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEec--CCEEEE-c---CE--EEEeCeEEEcCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVD--PHTVDV-D---GK--LYSARHILISVGG 219 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~--~~~v~v-~---g~--~~~~d~lviAtG~ 219 (551)
..+ ...+...+..... .+......+.++.++++..+ ++..++ .+.+.+ + +. .+.||++|+|||+
T Consensus 51 --~~g-~~~~~~~~~~~~~----~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 51 --VSG-EVSNIESLQATPY----NVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp -------------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred --hcC-CCCchHHhccccc----hhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 000 0000001100000 01111112223457887653 555655 345555 2 44 7899999999999
Q ss_pred CCCCCCCCCCC--cee---cchhhhcCC-----CCCCeEEEEcCcHHHHHHHHHHHhC-CCeEEEEeecCccCC-CCCHH
Q 008841 220 RPFIPDIPGSE--YAI---DSDAALDLP-----SKPEKIAIVGGGYIALEFAGIFSGL-TSEVHVFIRQKKVLR-GFDED 287 (551)
Q Consensus 220 ~p~~p~i~g~~--~~~---~~~~~~~~~-----~~~~~vvViG~G~~g~e~a~~l~~~-g~~Vtlv~~~~~~l~-~~~~~ 287 (551)
+|..|++||.+ .++ +.++...+. ..+++++|||+|++|+|+|..+.+. |.+|+++++.+.+++ .++++
T Consensus 124 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~ 203 (472)
T 3iwa_A 124 KANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKS 203 (472)
T ss_dssp EECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHH
T ss_pred CcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHH
Confidence 99999999975 232 333333332 4579999999999999999999999 999999999999999 79999
Q ss_pred HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCC
Q 008841 288 IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDE 367 (551)
Q Consensus 288 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~ 367 (551)
+.+.+.+.+++.||+++++++|++++.+++. +.+.+.+|+++++|.||+|+|++|++++ ++..|++++++|+|.||+
T Consensus 204 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~~~g~i~vd~ 280 (472)
T 3iwa_A 204 LSQMLRHDLEKNDVVVHTGEKVVRLEGENGK-VARVITDKRTLDADLVILAAGVSPNTQL--ARDAGLELDPRGAIIVDT 280 (472)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSSB-EEEEEESSCEEECSEEEECSCEEECCHH--HHHHTCCBCTTCCEECCT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEccCCe-EEEEEeCCCEEEcCEEEECCCCCcCHHH--HHhCCccCCCCCCEEECC
Confidence 9999999999999999999999999886555 6688889989999999999999999986 677899999999999999
Q ss_pred CCCCCCCcEEEeCcCCC-------C---CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHH
Q 008841 368 YSGTAVPSIWAVGDVTD-------R---INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAI 437 (551)
Q Consensus 368 ~~~t~~~~vya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~ 437 (551)
++||+.|+|||+|||+. . +++++.|..||+++|+||+|....+..+...+++.|++|+++++|++|+||+
T Consensus 281 ~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~ 360 (472)
T 3iwa_A 281 RMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGAL 360 (472)
T ss_dssp TCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCHHHHH
T ss_pred CcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCHHHHH
Confidence 99999999999999983 2 4688999999999999999876544333344556788999999999999999
Q ss_pred hcCCCeEEEEeeccCccccccc-CCCcEEEEEEEECCCCeEEEEEEECC---ChhHHHHHHHHHHHCCCCHHHHccCccc
Q 008841 438 QEYGDIDVFTANFRPLKATLSG-LPDRIFMKLVLCAKTNKVLGLHMCGE---DAPEIVQGFAVAVKAGLTKADFDATVGV 513 (551)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~ilG~~~~g~---~~~e~i~~~~~~i~~~~~~~~l~~~~~~ 513 (551)
+++.++.+... ....++... +.+.+|+||++|+++|+|||+|++|+ .+.|+|+.+++||++|+|++||.+++++
T Consensus 361 ~~g~~~~~~~~--~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~ 438 (472)
T 3iwa_A 361 REGYDAVNVHV--EQFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVV 438 (472)
T ss_dssp HTTCCEEEEEE--EC-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC
T ss_pred HcCCceEEEEE--ecCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhccccc
Confidence 98767766543 334455444 67789999999999999999999999 4589999999999999999999999999
Q ss_pred C-CCchHHHHHHHhhhhhh
Q 008841 514 H-PTAAEEFVTLRTPTRKI 531 (551)
Q Consensus 514 ~-pt~~e~~~~~~~~~~~~ 531 (551)
| ||++|.+..+..++.++
T Consensus 439 ~~P~~~~~~~~~~~~~~~~ 457 (472)
T 3iwa_A 439 YSPPFASAMDIVNVAGNVA 457 (472)
T ss_dssp --------CCHHHHHHHHH
T ss_pred CCCCCCCcccHHHHHHHHH
Confidence 8 99999888766666554
No 37
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=8.2e-56 Score=470.65 Aligned_cols=408 Identities=19% Similarity=0.254 Sum_probs=319.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCC---CcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFG---ASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G---~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
++||+|||||+||+++|..|++.| .+|+|||+ ....+ +.+| ....+.... +.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~---------~~~~~----~~~~---~~~~~~~~~---~~------ 89 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQ---------NSNIS----FLGA---GMALWIGEQ---IA------ 89 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECS---------SSCCS----BCGG---GHHHHHTTS---SS------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEC---------CCCCC----cccc---ccchhhcCc---cC------
Confidence 489999999999999999999987 99999993 11111 1222 111110000 00
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEec--CCEEEEc----CEEEEeCeEEEcCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIVD--PHTVDVD----GKLYSARHILISVGGRP 221 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i~--~~~v~v~----g~~~~~d~lviAtG~~p 221 (551)
++..+.. ...+.+.+.+++++.+. +..++ .+.+.+. +..+.||+||+|||++|
T Consensus 90 ---------~~~~~~~-----------~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 90 ---------GPEGLFY-----------SDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp ---------CSGGGBS-----------CCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred ---------CHHHhhh-----------cCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCc
Confidence 0000000 00123445689986654 66665 5667764 45799999999999999
Q ss_pred CCCCCCCCC-------------ceec------chhhhcCC--CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 222 FIPDIPGSE-------------YAID------SDAALDLP--SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 222 ~~p~i~g~~-------------~~~~------~~~~~~~~--~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
..|++||.+ .+++ .+++++.. ..+++++|||+|++|+|+|..|+++|.+|+++++.+.+
T Consensus 150 ~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 150 ILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 999999865 2443 23333333 56899999999999999999999999999999999999
Q ss_pred CC-CCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecC
Q 008841 281 LR-GFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTK 359 (551)
Q Consensus 281 l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~ 359 (551)
++ .+++++.+.+.+.+++.||+++++++|++++.+ ++...+.+ +|+++++|.||+|+|++|++++ ++.. +++++
T Consensus 230 l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~l--l~~~-l~~~~ 304 (490)
T 2bc0_A 230 LAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN-GKVEKIIT-DKNEYDVDMVILAVGFRPNTTL--GNGK-IDLFR 304 (490)
T ss_dssp TTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECS-SSCCEEEE-SSCEEECSEEEECCCEEECCGG--GTTC-SCBCT
T ss_pred hhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC-CcEEEEEE-CCcEEECCEEEECCCCCcChHH--HHhh-hccCC
Confidence 98 599999999999999999999999999999863 33233555 6778999999999999999987 5565 78888
Q ss_pred CCCeEeCCCCCCCCCcEEEeCcCCCC----------CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEe
Q 008841 360 NGAIEVDEYSGTAVPSIWAVGDVTDR----------INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQV 429 (551)
Q Consensus 360 ~G~i~vd~~~~t~~~~vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~v 429 (551)
+|+|.||+++||+.|+|||+|||+.. +++++.|..||+++|.||+|....+..+...++..+.+|+++++
T Consensus 305 ~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~v 384 (490)
T 2bc0_A 305 NGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVST 384 (490)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEE
T ss_pred CCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCcEeEEe
Confidence 89999999999999999999999983 47899999999999999998654444455566655558999999
Q ss_pred eCCHHHHHhcCCCeEEEEeeccCccccccc--CCCcEEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCHHH
Q 008841 430 GLSEEQAIQEYGDIDVFTANFRPLKATLSG--LPDRIFMKLVLCAKTNKVLGLHMCGE-DAPEIVQGFAVAVKAGLTKAD 506 (551)
Q Consensus 430 Gl~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~kl~~~~~~~~ilG~~~~g~-~~~e~i~~~~~~i~~~~~~~~ 506 (551)
|+++++|+..+.++.+. .+....++... +...+|+|+++|+++|+|+|++++|+ ++.|+|+.++++|++++|++|
T Consensus 385 G~~~~~a~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~ 462 (490)
T 2bc0_A 385 GLTLEKAKRLGFDAAVT--EYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEK 462 (490)
T ss_dssp ECCHHHHHHTTCCEEEE--EEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHH
T ss_pred eCCHHHHHHcCCceEEE--EEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHH
Confidence 99999999887666655 33434444333 35679999999999999999999999 899999999999999999999
Q ss_pred HccC-cccCCCchHHHHHHHhhhhhh
Q 008841 507 FDAT-VGVHPTAAEEFVTLRTPTRKI 531 (551)
Q Consensus 507 l~~~-~~~~pt~~e~~~~~~~~~~~~ 531 (551)
|.++ +++|||++|.+..+..++.++
T Consensus 463 l~~~~~~~~Pt~~e~~~~~~~~~~~~ 488 (490)
T 2bc0_A 463 LALTDIFFLPHFNKPYNYITMAALGA 488 (490)
T ss_dssp HHHSCCCCCTTTCCTTCHHHHHHHTC
T ss_pred HhhcceecCCCCCchhHHHHHHHHHh
Confidence 9986 999999999988887777654
No 38
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=3.5e-55 Score=460.98 Aligned_cols=408 Identities=22% Similarity=0.291 Sum_probs=319.7
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+||+|||||+||+++|..|++. |.+|+|||+ ....| +.++....+.... .
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~---------~~~~~-------~~~~~~~~~~~~~---~--------- 52 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEK---------GDFIS-------FLSAGMQLYLEGK---V--------- 52 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEES---------SSSSS-------BCGGGHHHHHTTS---S---------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEEC---------CCccC-------cccccchhhhcCc---c---------
Confidence 4899999999999999999996 999999993 11122 1222111111000 0
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEe--cCCEEEE-c---CE--EEEeCeEEEcCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIV--DPHTVDV-D---GK--LYSARHILISVGGRP 221 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i--~~~~v~v-~---g~--~~~~d~lviAtG~~p 221 (551)
.++..+.. ...+.+.+.+++++.+. +..+ +.+.+.+ + ++ ++.||++|+|||++|
T Consensus 53 ------~~~~~~~~-----------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 53 ------KDVNSVRY-----------MTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp ------CCGGGSBS-----------CCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ------CCHHHhhc-----------CCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 01111000 01123445689987664 4445 4567776 2 43 489999999999999
Q ss_pred CCCCCCCCC--ceecc---hhhhcCC---C--CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC-CCCHHHHH
Q 008841 222 FIPDIPGSE--YAIDS---DAALDLP---S--KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR-GFDEDIRD 290 (551)
Q Consensus 222 ~~p~i~g~~--~~~~~---~~~~~~~---~--~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~ 290 (551)
..|++||.+ .++++ ++...+. . .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+
T Consensus 116 ~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 195 (447)
T 1nhp_A 116 FELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTD 195 (447)
T ss_dssp CCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHH
T ss_pred CCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHH
Confidence 999999974 35543 3332221 1 589999999999999999999999999999999999888 48999999
Q ss_pred HHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCC
Q 008841 291 FVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG 370 (551)
Q Consensus 291 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~ 370 (551)
.+.+.+++.||+++++++|++++.+ ++...+.+ +++++++|.||+|+|++|++++ ++.. ++++++|+|.||+++|
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~--~~~~-~~~~~~G~i~Vd~~~~ 270 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPNTAW--LKGT-LELHPNGLIKTDEYMR 270 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCCTTCB
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCChHH--HHhh-hhhcCCCcEEECcccc
Confidence 9999999999999999999999865 33234555 4567999999999999999987 5566 7788889999999999
Q ss_pred CCCCcEEEeCcCCCC----------CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHhcC
Q 008841 371 TAVPSIWAVGDVTDR----------INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEY 440 (551)
Q Consensus 371 t~~~~vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~~~ 440 (551)
|+.|+|||+|||+.. +++++.|..||+++|+||+|.+..+.++...|++.|++|+++++|+++++|+..+
T Consensus 271 t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g 350 (447)
T 1nhp_A 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLG 350 (447)
T ss_dssp CSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHT
T ss_pred CCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEecCCHHHHHHcC
Confidence 999999999999972 4689999999999999999865444556678899999999999999999999887
Q ss_pred CCeEEEEeeccCccccccc-CCCcEEEEEEEECCCCeEEEEEEECCC-hhHHHHHHHHHHHCCCCHHHHccC-cccCCCc
Q 008841 441 GDIDVFTANFRPLKATLSG-LPDRIFMKLVLCAKTNKVLGLHMCGED-APEIVQGFAVAVKAGLTKADFDAT-VGVHPTA 517 (551)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~ilG~~~~g~~-~~e~i~~~~~~i~~~~~~~~l~~~-~~~~pt~ 517 (551)
.++.+.. +....++... ..+.+|+|+++++++|+|+|+|++|+. +.|+|+.++++|++++|++||.++ +++|||+
T Consensus 351 ~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~ 428 (447)
T 1nhp_A 351 KETKAVT--VVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAF 428 (447)
T ss_dssp CCCEEEE--EEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTT
T ss_pred CceEEEE--EEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCC
Confidence 6665543 2333344333 466789999999889999999999998 999999999999999999999997 8999999
Q ss_pred hHHHHHHHhhhhhhc
Q 008841 518 AEEFVTLRTPTRKIR 532 (551)
Q Consensus 518 ~e~~~~~~~~~~~~~ 532 (551)
+|.+..+..++.++.
T Consensus 429 ~e~~~~~~~aa~~~~ 443 (447)
T 1nhp_A 429 DKPWNIINTAALEAV 443 (447)
T ss_dssp CCSSCHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHh
Confidence 999888877776654
No 39
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=8.3e-55 Score=461.75 Aligned_cols=408 Identities=22% Similarity=0.294 Sum_probs=322.8
Q ss_pred CccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCC-cchHHHHHhhhhhhHhhhccCCC
Q 008841 72 DFDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGC-VPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
++||+|||||+||+++|..|++. |.+|+|||+ ....++ ..| +|.. ...
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~---------~~~~~~----~~~~~~~~----~~~------------ 86 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEK---------GEIYSY----AQCGLPYV----ISG------------ 86 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS---------SSCCSB----CGGGHHHH----HTT------------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC---------CCCCCC----CCCCcchh----hcC------------
Confidence 46999999999999999999995 899999993 112211 111 2210 000
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHH-HhCCeEEEEe-EEEEec--CCEEEE-c---CE--EEEeCeEEEcCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNIL-INAGITLIEG-RGKIVD--PHTVDV-D---GK--LYSARHILISVG 218 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~i~--~~~v~v-~---g~--~~~~d~lviAtG 218 (551)
...++..+..+. .+.+ +..+++++.+ .+..++ .+.+.+ + ++ .+.||+||+|||
T Consensus 87 ------~~~~~~~l~~~~-----------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (480)
T 3cgb_A 87 ------AIASTEKLIARN-----------VKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATG 149 (480)
T ss_dssp ------SSSCGGGGBSSC-----------HHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ------CcCCHHHhhhcC-----------HHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCC
Confidence 000111111100 1122 3458998875 556665 456666 2 54 799999999999
Q ss_pred CCCCCCCCCCCC--cee---cchhhhcCCC-----CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHH
Q 008841 219 GRPFIPDIPGSE--YAI---DSDAALDLPS-----KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDI 288 (551)
Q Consensus 219 ~~p~~p~i~g~~--~~~---~~~~~~~~~~-----~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 288 (551)
++|+.|++||.+ .++ ++++...+.+ .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.+++++
T Consensus 150 ~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 229 (480)
T 3cgb_A 150 VRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDM 229 (480)
T ss_dssp EEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHH
T ss_pred CcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHH
Confidence 999999999874 233 3455554432 689999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCC
Q 008841 289 RDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY 368 (551)
Q Consensus 289 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~ 368 (551)
.+.+.+.+++.||+++++++|++++.+ ++...+.+. +.++++|.||+|+|++|++++ ++..|++++++|+|.||++
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~~-~~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~~~G~I~Vd~~ 305 (480)
T 3cgb_A 230 AEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVETD-KGTYKADLVLVSVGVKPNTDF--LEGTNIRTNHKGAIEVNAY 305 (480)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEET-TEEEECSEEEECSCEEESCGG--GTTSCCCBCTTSCBCCCTT
T ss_pred HHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEEC-CCEEEcCEEEECcCCCcChHH--HHhCCcccCCCCCEEECCC
Confidence 999999999999999999999999875 333345665 457999999999999999987 6788899998999999999
Q ss_pred CCCCCCcEEEeCcCCCC----------CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecCCceEEeeCCHHHHHh
Q 008841 369 SGTAVPSIWAVGDVTDR----------INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQPPIGQVGLSEEQAIQ 438 (551)
Q Consensus 369 ~~t~~~~vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a~~ 438 (551)
+||+.|+|||+|||+.. +++++.|..||+++|+||+|....+.++..+|++.|++|+++++|+++++|++
T Consensus 306 ~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~ 385 (480)
T 3cgb_A 306 MQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKG 385 (480)
T ss_dssp SBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHH
T ss_pred ccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccceeEEEECCcEEEEeCCCHHHHHH
Confidence 99999999999999952 26799999999999999998655455667789999999999999999999998
Q ss_pred cCCCeEEEEeeccCccccc-ccCCCcEEEEEEEECCCCeEEEEEEECCC-hhHHHHHHHHHHHCCCCHHHHccC-cccCC
Q 008841 439 EYGDIDVFTANFRPLKATL-SGLPDRIFMKLVLCAKTNKVLGLHMCGED-APEIVQGFAVAVKAGLTKADFDAT-VGVHP 515 (551)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~kl~~~~~~~~ilG~~~~g~~-~~e~i~~~~~~i~~~~~~~~l~~~-~~~~p 515 (551)
.+.++.+...... .++. ....+.+|+|+++|+++|+|+|++++|+. +.|+|+.++++|++++|++||.++ +++||
T Consensus 386 ~g~~~~~~~~~~~--~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~P 463 (480)
T 3cgb_A 386 LHIPYKTVKVDST--NMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAP 463 (480)
T ss_dssp TTCCEEEEEEEEE--SSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCT
T ss_pred cCCceEEEEEecC--CcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCC
Confidence 8767666544332 2221 12456789999999889999999999998 999999999999999999999996 68999
Q ss_pred CchHHHHHHHhhhhhh
Q 008841 516 TAAEEFVTLRTPTRKI 531 (551)
Q Consensus 516 t~~e~~~~~~~~~~~~ 531 (551)
|++|.+..+..++.++
T Consensus 464 t~~e~~~~~~~a~~~~ 479 (480)
T 3cgb_A 464 PYNSVWDPIQQAARRA 479 (480)
T ss_dssp TTCCSSCHHHHHHHHC
T ss_pred CCCCchhHHHHHHHhc
Confidence 9999988887777654
No 40
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=5.7e-54 Score=467.07 Aligned_cols=400 Identities=19% Similarity=0.275 Sum_probs=312.5
Q ss_pred CCccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCC-cchHHHHHhhhhhhHhhhccCC
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGC-VPKKLLVYASKFSHEFDESNGF 147 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~~~~ 147 (551)
+++||+|||||+||++||..|++. |.+|+|||+ ....+ +..| +|. ....
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~---------~~~~~----~~~~~lp~----~~~g----------- 86 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVER---------GEYIS----FANCGLPY----YIGG----------- 86 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS---------SSCSS----BCGGGHHH----HHTT-----------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEEC---------CCCcc----ccCCCCch----hhcC-----------
Confidence 357999999999999999999997 899999993 11111 0001 110 0000
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEec--CCEEEE----cCE--EEEeCeEEEcCC
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVD--PHTVDV----DGK--LYSARHILISVG 218 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~--~~~v~v----~g~--~~~~d~lviAtG 218 (551)
. . .....+ +......+.++.++++..+ ++..++ .+.+.+ ++. .+.||+||+|||
T Consensus 87 -~-----~-~~~~~~----------~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (588)
T 3ics_A 87 -V-----I-TERQKL----------LVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPG 149 (588)
T ss_dssp -S-----S-CCGGGG----------BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred -c-----C-CChHHh----------hccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCC
Confidence 0 0 000000 0011122334568888654 455554 456655 344 789999999999
Q ss_pred CCCCCCCCCCC-C--ceecchhhhcC--------CCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHH
Q 008841 219 GRPFIPDIPGS-E--YAIDSDAALDL--------PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDED 287 (551)
Q Consensus 219 ~~p~~p~i~g~-~--~~~~~~~~~~~--------~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~ 287 (551)
++|..|++||. + .+++..+.... ...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.++++
T Consensus 150 ~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~ 229 (588)
T 3ics_A 150 AKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYE 229 (588)
T ss_dssp EEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHH
T ss_pred CCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHH
Confidence 99999999987 3 34444433222 1357999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCC
Q 008841 288 IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDE 367 (551)
Q Consensus 288 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~ 367 (551)
+.+.+.+.+++.||+++++++|++++.++++ |.+.+|+++++|.||+|+|++|++++ ++..|++++++|+|.||+
T Consensus 230 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~---v~~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~g~~~~~~g~i~vd~ 304 (588)
T 3ics_A 230 MAAYVHEHMKNHDVELVFEDGVDALEENGAV---VRLKSGSVIQTDMLILAIGVQPESSL--AKGAGLALGVRGTIKVNE 304 (588)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEGGGTE---EEETTSCEEECSEEEECSCEEECCHH--HHHTTCCBCGGGCBCCCT
T ss_pred HHHHHHHHHHHcCCEEEECCeEEEEecCCCE---EEECCCCEEEcCEEEEccCCCCChHH--HHhcCceEcCCCCEEECC
Confidence 9999999999999999999999999865443 77889999999999999999999987 788899999999999999
Q ss_pred CCCCCCCcEEEeCcCCC-------C---CCChHHHHHhHHHHHHHHcC-CCCCCCCCCCccEEEecCCceEEeeCCHHHH
Q 008841 368 YSGTAVPSIWAVGDVTD-------R---INLTPVALMEGGALAKTLFQ-AEPTKPDYSAVPSAVFSQPPIGQVGLSEEQA 436 (551)
Q Consensus 368 ~~~t~~~~vya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vGl~~~~a 436 (551)
++||++|+|||+|||+. . +++++.|..||+++|+||+| .+..+......+...|++|+++++|+||+||
T Consensus 305 ~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a 384 (588)
T 3ics_A 305 KFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKIL 384 (588)
T ss_dssp TSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCHHHH
T ss_pred ccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCHHHH
Confidence 99999999999999994 2 47899999999999999998 5433322233344568899999999999999
Q ss_pred HhcCCCeEEEEeeccCcccc-cccCCCcEEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCHHHHccCcccC
Q 008841 437 IQEYGDIDVFTANFRPLKAT-LSGLPDRIFMKLVLCAKTNKVLGLHMCGE-DAPEIVQGFAVAVKAGLTKADFDATVGVH 514 (551)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kl~~~~~~~~ilG~~~~g~-~~~e~i~~~~~~i~~~~~~~~l~~~~~~~ 514 (551)
++++.++.+..... ..++ +..+.+.+|+|+++|+++|+|||+|++|+ .+.|+|+.+++||++|+|++||.+++++|
T Consensus 385 ~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~~~ 462 (588)
T 3ics_A 385 KRLNIPYEVVHVQA--NSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLELSY 462 (588)
T ss_dssp HHTTCCCEEEEEEE--ESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCCCC
T ss_pred HHcCCCeEEEEEec--CCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhhcc
Confidence 99887776665432 2222 34567789999999999999999999998 58999999999999999999999999888
Q ss_pred -CCchHHHH
Q 008841 515 -PTAAEEFV 522 (551)
Q Consensus 515 -pt~~e~~~ 522 (551)
|++++...
T Consensus 463 ~P~~~~~~d 471 (588)
T 3ics_A 463 APPYSSAKD 471 (588)
T ss_dssp STTTCCSSC
T ss_pred CCCcccccc
Confidence 99876443
No 41
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=5.7e-54 Score=465.45 Aligned_cols=402 Identities=20% Similarity=0.274 Sum_probs=311.6
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCC-cchHHHHHhhhhhhHhhhccCCCc
Q 008841 73 FDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGC-VPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
+||+|||||+||+++|..|++. |.+|+|||+ ....+ ...| +|. .... . +
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~---------~~~~~----~~~~~l~~----~~~~----------~-~ 53 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFER---------GEYVS----FANCGLPY----HISG----------E-I 53 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECS---------SSCSS----BCGGGHHH----HHTS----------S-S
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC---------CCCcc----ccccCchH----HhcC----------C-c
Confidence 5899999999999999999996 899999993 11111 0001 111 0000 0 0
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEE-eEEEEecC--CEEEE-c---C--EEEEeCeEEEcCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIE-GRGKIVDP--HTVDV-D---G--KLYSARHILISVGGR 220 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~i~~--~~v~v-~---g--~~~~~d~lviAtG~~ 220 (551)
.........+ ...+..+.++++.. .++..++. +.+.+ + + ..+.||+||+|||++
T Consensus 54 ~~~~~~~~~~-----------------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 54 AQRSALVLQT-----------------PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp CCGGGGBCCC-----------------HHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CChHHhhccC-----------------HHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 0000000000 01122334888764 35666653 45555 2 3 378999999999999
Q ss_pred CCCCCCCCCC--ceecchhh---hcC-----CCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHH
Q 008841 221 PFIPDIPGSE--YAIDSDAA---LDL-----PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRD 290 (551)
Q Consensus 221 p~~p~i~g~~--~~~~~~~~---~~~-----~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~ 290 (551)
|+.|++||.+ .+++...+ ..+ ...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.+++++.+
T Consensus 117 p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~ 196 (565)
T 3ntd_A 117 PIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAG 196 (565)
T ss_dssp ECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHH
T ss_pred CCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHH
Confidence 9999999974 34443322 111 1357899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEcCcccEEEEEc------------------CCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccc
Q 008841 291 FVAEQMSLRGIEFHTEESPQAILKS------------------TDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEK 352 (551)
Q Consensus 291 ~l~~~l~~~Gv~i~~~~~v~~i~~~------------------~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~ 352 (551)
.+.+.+++.||++++++.|++++.+ .++.+.+.+.+|+++++|.||+|+|++|++++ ++.
T Consensus 197 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~ 274 (565)
T 3ntd_A 197 FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQL--ARD 274 (565)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHH--HHH
T ss_pred HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHH--HHh
Confidence 9999999999999999999999873 23336788899999999999999999999986 678
Q ss_pred cCeeecCCCCeEeCCCCCCCCCcEEEeCcCCC-------C---CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEec
Q 008841 353 VGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTD-------R---INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFS 422 (551)
Q Consensus 353 ~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~ 422 (551)
.|++++++|+|.||+++||+.|+|||+|||+. . +++++.|..||+++|+||+|+...+..+...+++.|+
T Consensus 275 ~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~ 354 (565)
T 3ntd_A 275 AGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVF 354 (565)
T ss_dssp HTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEET
T ss_pred CCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEc
Confidence 89999999999999999999999999999984 2 3689999999999999999876554444445567788
Q ss_pred CCceEEeeCCHHHHHhcCCCeEEEEeeccCccccccc-CCCcEEEEEEEECCCCeEEEEEEECCCh-hHHHHHHHHHHHC
Q 008841 423 QPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSG-LPDRIFMKLVLCAKTNKVLGLHMCGEDA-PEIVQGFAVAVKA 500 (551)
Q Consensus 423 ~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~ilG~~~~g~~~-~e~i~~~~~~i~~ 500 (551)
+|+++++|++|+||++.+.++.+... ....++... +.+.+|+|+++|+++|+|||+|++|+++ .|+|+.+++||++
T Consensus 355 ~~~~~~vG~~e~~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~ 432 (565)
T 3ntd_A 355 DLAVGATGKNEKQLKQAGIAFEKVYV--HTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRA 432 (565)
T ss_dssp TEEEEEEECCHHHHHHTTCCCEEEEE--EEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHT
T ss_pred CcEEEEecCCHHHHHHcCCCeEEEEE--ecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHc
Confidence 99999999999999988766665443 223344333 6678999999999999999999999998 9999999999999
Q ss_pred CCCHHHHccCcc-cCCCchHHHHH
Q 008841 501 GLTKADFDATVG-VHPTAAEEFVT 523 (551)
Q Consensus 501 ~~~~~~l~~~~~-~~pt~~e~~~~ 523 (551)
|+|++||.++++ +||++++.+..
T Consensus 433 ~~~~~~l~~~~~~~~P~~~~~~~~ 456 (565)
T 3ntd_A 433 GMTVEQLQHLELSYAPPYGSAKDV 456 (565)
T ss_dssp TCBHHHHTTCCCCCCTTTCCSSCH
T ss_pred CCCHHHHhhhhhccCcccCchhhh
Confidence 999999999875 56988765443
No 42
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=9.7e-47 Score=388.86 Aligned_cols=358 Identities=19% Similarity=0.228 Sum_probs=277.9
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFG--ASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNG 146 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~ 146 (551)
|+.++||+|||||+||+++|..|++.| .+|+|+| .. .||.|++.++...
T Consensus 1 M~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie----------~~--------~g~~~~~~~l~~~----------- 51 (384)
T 2v3a_A 1 MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMIT----------AD--------DGRSYSKPMLSTG----------- 51 (384)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEEC----------SS--------CCCEECGGGGGGT-----------
T ss_pred CCCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEE----------CC--------CCCccCcccccHH-----------
Confidence 344689999999999999999999988 5699999 22 1445543322110
Q ss_pred CCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC--CEEEEcCEEEEeCeEEEcCCCCCCC
Q 008841 147 FGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP--HTVDVDGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 147 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~--~~v~v~g~~~~~d~lviAtG~~p~~ 223 (551)
+ . .......+.. .....++++.+++++.+ .+..++. +++.+++..+.||++|+|||++|..
T Consensus 52 --~--~--~~~~~~~~~~----------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~d~lviAtG~~p~~ 115 (384)
T 2v3a_A 52 --F--S--KNKDADGLAM----------AEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGEEEVRYRDLVLAWGAEPIR 115 (384)
T ss_dssp --T--T--TTCCHHHHEE----------ECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETTEEEECSEEEECCCEEECC
T ss_pred --H--h--CCCCHHHhhc----------cCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECCcEEECCEEEEeCCCCcCC
Confidence 0 0 0011111100 01223445678998865 4566654 7788877789999999999999999
Q ss_pred CCCCCCC--ceecchhhhcCC------CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHHH
Q 008841 224 PDIPGSE--YAIDSDAALDLP------SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVAE 294 (551)
Q Consensus 224 p~i~g~~--~~~~~~~~~~~~------~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~ 294 (551)
|++||.+ .+++.+++.++. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+
T Consensus 116 p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~ 195 (384)
T 2v3a_A 116 VPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQA 195 (384)
T ss_dssp CCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHH
T ss_pred CCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHH
Confidence 9999864 466655544321 23899999999999999999999999999999999998887 58999999999
Q ss_pred HHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCC
Q 008841 295 QMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVP 374 (551)
Q Consensus 295 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 374 (551)
.+++.||+++++++|++++.++++ +.|.+.+|+++++|.||+|+|++|++++ ++..+++++ +| |.||+++||+.|
T Consensus 196 ~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vv~a~G~~p~~~l--~~~~g~~~~-~g-i~vd~~~~t~~~ 270 (384)
T 2v3a_A 196 GLEGLGVRFHLGPVLASLKKAGEG-LEAHLSDGEVIPCDLVVSAVGLRPRTEL--AFAAGLAVN-RG-IVVDRSLRTSHA 270 (384)
T ss_dssp HHHTTTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEECCHH--HHHTTCCBS-SS-EEECTTCBCSST
T ss_pred HHHHcCCEEEeCCEEEEEEecCCE-EEEEECCCCEEECCEEEECcCCCcCHHH--HHHCCCCCC-CC-EEECCCCCCCCC
Confidence 999999999999999999876655 7788999989999999999999999986 678899887 57 999999999999
Q ss_pred cEEEeCcCCCC----CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEEecC-CceEEeeCCHHHHHhcCCCeEEEEee
Q 008841 375 SIWAVGDVTDR----INLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAVFSQ-PPIGQVGLSEEQAIQEYGDIDVFTAN 449 (551)
Q Consensus 375 ~vya~GD~~~~----~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~-~~~~~vGl~~~~a~~~~~~~~~~~~~ 449 (551)
+|||+|||+.. .+++..|..||+++|+||+|.+ ...+|..+|+++|+. +++.++|+++.+ . ..
T Consensus 271 ~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~-~~~~~~~~p~~~~~~~~~~~~~g~~~~~----~-~~------ 338 (384)
T 2v3a_A 271 NIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNP-SQVAYGPMPVTVKTPACPLVVSPPPRGM----D-GQ------ 338 (384)
T ss_dssp TEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEEECCTTSCEEEECCCTTC----C-CE------
T ss_pred CEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCC-ccCCCCCcceEEEECCeeEEEecCCCCC----C-ce------
Confidence 99999999852 2467789999999999999865 456778899999986 589999977531 0 00
Q ss_pred ccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHH
Q 008841 450 FRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFA 495 (551)
Q Consensus 450 ~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~ 495 (551)
.....++.+|.|++++ ++|+|+|++++|+.|.|+++.+.
T Consensus 339 ------~~~~~~~~g~~~~~~~-~~~~i~G~~~~g~~a~e~~~~~~ 377 (384)
T 2v3a_A 339 ------WLVEGSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALNK 377 (384)
T ss_dssp ------EEEEEETTEEEEEEEC-TTSCEEEEEEEGGGGGGHHHHHT
T ss_pred ------EEEEecCCcEEEEEEc-cCCEEEEEEEECcchHHHHHHHH
Confidence 0011234579999887 68999999999999999887654
No 43
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=4.4e-47 Score=390.09 Aligned_cols=358 Identities=19% Similarity=0.262 Sum_probs=277.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+.+|||||||+||++||..|++.+.+|+|||+ ....+. ..+.-++.+ ...
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~---------~~~~~y----~~~~l~~~l--~g~--------------- 58 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINS---------EKYLPY----YRPRLNEII--AKN--------------- 58 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECS---------SSSCCB----CGGGHHHHH--HSC---------------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEEC---------CCCCCc----ccChhhHHH--cCC---------------
Confidence 46899999999999999999888999999993 111111 001101110 000
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP--HTVDV-DGKLYSARHILISVGGRPFIPDIP 227 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~p~i~ 227 (551)
.+..++ .....+++++.+++++.+ ++..++. +.+.+ +++++.||+||+|||++|+.|++|
T Consensus 59 -----~~~~~l-----------~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~ 122 (385)
T 3klj_A 59 -----KSIDDI-----------LIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVP 122 (385)
T ss_dssp -----CCGGGT-----------BSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCT
T ss_pred -----CCHHHc-----------cCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCC
Confidence 000000 001123345679999887 5777764 56777 678999999999999999999999
Q ss_pred CCCceec---chhhhcCCC---CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHHHHHHhcC
Q 008841 228 GSEYAID---SDAALDLPS---KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVAEQMSLRG 300 (551)
Q Consensus 228 g~~~~~~---~~~~~~~~~---~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~G 300 (551)
|.+.+++ .++...+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.+++.|
T Consensus 123 G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~g 202 (385)
T 3klj_A 123 HADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLG 202 (385)
T ss_dssp TCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTT
T ss_pred CCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCC
Confidence 9875443 455544432 2689999999999999999999999999999999999987 89999999999999999
Q ss_pred cEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeC
Q 008841 301 IEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVG 380 (551)
Q Consensus 301 v~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~G 380 (551)
|++++++.++++ |+++++|.||+|+|++|++++ ++.++++.+ +| |.||+++||+.|+|||+|
T Consensus 203 V~~~~~~~v~~i--------------g~~~~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g-i~vd~~~~t~~~~IyA~G 264 (385)
T 3klj_A 203 IKIYTNSNFEEM--------------GDLIRSSCVITAVGVKPNLDF--IKDTEIASK-RG-ILVNDHMETSIKDIYACG 264 (385)
T ss_dssp CEEECSCCGGGC--------------HHHHHHSEEEECCCEEECCGG--GTTSCCCBS-SS-EEECTTCBCSSTTEEECG
T ss_pred CEEEeCCEEEEc--------------CeEEecCeEEECcCcccChhh--hhhcCCCcC-CC-EEECCCcccCCCCEEEEE
Confidence 999999988776 456899999999999999988 677888876 34 999999999999999999
Q ss_pred cCCC----CCCChHHHHHhHHHHHHHHcCCCCCCCCCCC-ccE--EEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCc
Q 008841 381 DVTD----RINLTPVALMEGGALAKTLFQAEPTKPDYSA-VPS--AVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPL 453 (551)
Q Consensus 381 D~~~----~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~-~~~--~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~ 453 (551)
||+. .++++..|..||++||.||+|.... |.. .|+ ..+.+++++++|+++.+. .+. +..
T Consensus 265 D~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~G~~~~~~----~~~-~~~------ 330 (385)
T 3klj_A 265 DVAEFYGKNPGLINIANKQGEVAGLNACGEDAS---YSEIIPSPILKVSGISIISCGDIENNK----PSK-VFR------ 330 (385)
T ss_dssp GGEEETTBCCCCHHHHHHHHHHHHHHHTTCCCC---CCCCCCCCEEEETTEEEEEESCCTTCC----CSE-EEE------
T ss_pred eeEecCCCcccHHHHHHHHHHHHHHHhcCCCcC---CCCCCCcEEEEeCCCcEEEEcCCCCCC----CeE-EEE------
Confidence 9997 3678999999999999999986543 332 344 444688999999997542 111 111
Q ss_pred ccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCchHHHHH
Q 008841 454 KATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTAAEEFVT 523 (551)
Q Consensus 454 ~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~ 523 (551)
+..+..|.|+++ ++|+|+|++++|+.+.++ .+..+|+++.++++| ||++|.+.+
T Consensus 331 -----~~~~~~~~~~~~--~~~~l~g~~~~g~~~~~~--~~~~~i~~~~~~~~~-------~~~~E~~~~ 384 (385)
T 3klj_A 331 -----STQEDKYIVCML--KENKIDAAAVIGDVSLGT--KLKKAIDSSKSFDNI-------SSLDAILNN 384 (385)
T ss_dssp -----EECSSCEEEEEE--ETTEEEEEEEESCHHHHH--HHHHHHHTTCBCSCC-------SCHHHHHTT
T ss_pred -----ECCCCeEEEEEE--ECCEEEEEEEECCcHHHH--HHHHHHHcCCCcccc-------cCHHHHHhh
Confidence 123557999999 479999999999976554 688999999999998 999998754
No 44
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.4e-46 Score=382.75 Aligned_cols=331 Identities=19% Similarity=0.265 Sum_probs=251.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcccC
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYG 152 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 152 (551)
-||+|||||+||++||..|++.| +|+|||+ ...++ ...+..++. +.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~----------~~~~~---~~~~~l~~~----------~~---------- 54 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDK----------EPVPY---YSKPMLSHY----------IA---------- 54 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECS----------SSSCC---CCSTTHHHH----------HT----------
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEEC----------CCCCc---cccchhHHH----------Hh----------
Confidence 48999999999999999999999 9999993 22111 000111110 00
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecCC--EEEEcCEEEEeCeEEEcCCCCCCCCCCCCC
Q 008841 153 TEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDPH--TVDVDGKLYSARHILISVGGRPFIPDIPGS 229 (551)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~~--~v~v~g~~~~~d~lviAtG~~p~~p~i~g~ 229 (551)
...++..+..+ ..+++++.+++++.+ .+..+++. .+..+++++.||+||||||++|+.|++||.
T Consensus 55 --g~~~~~~~~~~-----------~~~~~~~~~v~~~~g~~v~~id~~~~~V~~~g~~~~~d~lViATGs~p~~p~i~G~ 121 (367)
T 1xhc_A 55 --GFIPRNRLFPY-----------SLDWYRKRGIEIRLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGARAREPQIKGK 121 (367)
T ss_dssp --TSSCGGGGCSS-----------CHHHHHHHTEEEECSCCEEEEETTTTEEEESSCEEECSEEEECCCEEECCCCSBTG
T ss_pred --CCCCHHHhccC-----------CHHHHHhCCcEEEECCEEEEEECCCCEEEECCcEEECCEEEECCCCCCCCCCCCCc
Confidence 00112211111 112344568999988 47777754 444467789999999999999999999996
Q ss_pred Cceec---chhhhcCCC---CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEE
Q 008841 230 EYAID---SDAALDLPS---KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF 303 (551)
Q Consensus 230 ~~~~~---~~~~~~~~~---~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 303 (551)
+.+++ .+++..+.+ .+++++|||+|++|+|+|..|+++|.+|+++++.+.+++ +++++.+.+.+.+++.||++
T Consensus 122 ~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i 200 (367)
T 1xhc_A 122 EYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKF 200 (367)
T ss_dssp GGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEE
T ss_pred CCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEE
Confidence 55554 344444322 258999999999999999999999999999999999988 99999999999999999999
Q ss_pred EcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCC
Q 008841 304 HTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT 383 (551)
Q Consensus 304 ~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~ 383 (551)
+++++|++++ .+ .|.+.+|+ +++|.|++|+|++|++++ ++..+++.+ +| |.||+++||+.|+|||+|||+
T Consensus 201 ~~~~~v~~i~--~~---~v~~~~g~-i~~D~vi~a~G~~p~~~l--l~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~a 270 (367)
T 1xhc_A 201 FLNSELLEAN--EE---GVLTNSGF-IEGKVKICAIGIVPNVDL--ARRSGIHTG-RG-ILIDDNFRTSAKDVYAIGDCA 270 (367)
T ss_dssp ECSCCEEEEC--SS---EEEETTEE-EECSCEEEECCEEECCHH--HHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGE
T ss_pred EcCCEEEEEE--ee---EEEECCCE-EEcCEEEECcCCCcCHHH--HHhCCCCCC-CC-EEECCCcccCCCCEEEeEeee
Confidence 9999999996 22 37788888 999999999999999986 678888876 44 999999999999999999998
Q ss_pred CC----CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccE--EEecCCceEEeeCCHHHHHhcCCCeEEEEeeccCccccc
Q 008841 384 DR----INLTPVALMEGGALAKTLFQAEPTKPDYSAVPS--AVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATL 457 (551)
Q Consensus 384 ~~----~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~--~~~~~~~~~~vGl~~~~a~~~~~~~~~~~~~~~~~~~~~ 457 (551)
.. +++++.|..||+++|+||+|.... .++ ..|+ ..|++|+++++|++++++. .+
T Consensus 271 ~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~-~~~-~~~~~~~~~~~~~~~~vG~~~~~~~------~~------------ 330 (367)
T 1xhc_A 271 EYSGIIAGTAKAAMEQARVLADILKGEPRR-YNF-KFRSTVFKFGKLQIAIIGNTKGEGK------WI------------ 330 (367)
T ss_dssp EBTTBCCCSHHHHHHHHHHHHHHHTTCCCC-CCS-SCCEEEEEETTEEEEEEECCSSCEE------EE------------
T ss_pred ecCCCCccHHHHHHHHHHHHHHHhcCCCcc-CCC-CCCceEEEECCceEEEECCCCCCCc------cc------------
Confidence 52 478999999999999999986432 222 2343 5799999999999987421 00
Q ss_pred ccCCCcEEEEEEEECCCCeEEEEEEECCChh
Q 008841 458 SGLPDRIFMKLVLCAKTNKVLGLHMCGEDAP 488 (551)
Q Consensus 458 ~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~ 488 (551)
.+|+|++++ +++|+|++++|+.+.
T Consensus 331 -----~~~~k~~~~--~~~ilG~~~~g~~~~ 354 (367)
T 1xhc_A 331 -----EDNTKVFYE--NGKIIGAVVFNDIRK 354 (367)
T ss_dssp -----ETTEEEEC-------CEEEEESCHHH
T ss_pred -----ceEEEEEEE--CCEEEEEEEECChHH
Confidence 468999996 599999999998643
No 45
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.4e-43 Score=370.24 Aligned_cols=378 Identities=19% Similarity=0.199 Sum_probs=286.0
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCC--cEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCC
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGA--SVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGF 147 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 147 (551)
++.+||+|||||+||+++|..|++.|. +|+|||+ ....+. ..+..++.++ .
T Consensus 2 ~~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~---------~~~~~~----~~~~l~~~~~---------~----- 54 (431)
T 1q1r_A 2 NANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGD---------ATVIPH----HLPPLSKAYL---------A----- 54 (431)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS---------CCSCCB----CSGGGGTTTT---------T-----
T ss_pred CCCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEEC---------CCCCCC----cCCCCcHHHh---------C-----
Confidence 346899999999999999999999998 7999993 111100 0000000000 0
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCC
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIVDP--HTVDV-DGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~ 223 (551)
+ ...+..+. ....+.+.+.+++++.+. +..++. +.+.+ +++.+.||+||+|||++|+.
T Consensus 55 -----~--~~~~~~~~-----------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 55 -----G--KATAESLY-----------LRTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRP 116 (431)
T ss_dssp -----T--CSCSGGGB-----------SSCHHHHHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC
T ss_pred -----C--CCChHHhc-----------ccCHHHHHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccC
Confidence 0 00000000 001123456699998874 566664 56777 67789999999999999999
Q ss_pred CCCCCCC--c---e---ecchhhhcCC---CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHH
Q 008841 224 PDIPGSE--Y---A---IDSDAALDLP---SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDF 291 (551)
Q Consensus 224 p~i~g~~--~---~---~~~~~~~~~~---~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~ 291 (551)
|++||.+ . + .+.+++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.
T Consensus 117 ~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~ 196 (431)
T 1q1r_A 117 LPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAF 196 (431)
T ss_dssp CGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHH
T ss_pred CCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHH
Confidence 9999864 2 3 3455554332 34799999999999999999999999999999999998886 89999999
Q ss_pred HHHHHHhcCcEEEcCcccEEEEE--cCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCC
Q 008841 292 VAEQMSLRGIEFHTEESPQAILK--STDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYS 369 (551)
Q Consensus 292 l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~ 369 (551)
+.+.+++.||+++++++|++++. ++++...|.+.+|+++++|.||+|+|++|++++ ++.++++++ +| |.||+++
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~~ 272 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCEL--ASAAGLQVD-NG-IVINEHM 272 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EECCTTS
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcch--hhccCCCCC-CC-EEECCCc
Confidence 99999999999999999999987 444534788999999999999999999999987 678888886 44 9999999
Q ss_pred CCCCCcEEEeCcCCCCC----------CChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEE--ecCCceEEeeCCHHHHH
Q 008841 370 GTAVPSIWAVGDVTDRI----------NLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAV--FSQPPIGQVGLSEEQAI 437 (551)
Q Consensus 370 ~t~~~~vya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~--~~~~~~~~vGl~~~~a~ 437 (551)
||+.|+|||+|||+..+ .++..|..||+++|.||+|... .|..+|+.. +.+.++.++|+++.
T Consensus 273 ~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~--- 346 (431)
T 1q1r_A 273 QTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP---RDEAAPWFWSDQYEIGLKMVGLSEG--- 346 (431)
T ss_dssp BCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC---CCCCCCEEEEEETTEEEEEEECCTT---
T ss_pred ccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC---CCCCCCeEEEEECCceEEEEeCCCC---
Confidence 99999999999999853 2578899999999999998653 456677652 23468999998763
Q ss_pred hcCCCeEEEEeeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHccCcccCCCc
Q 008841 438 QEYGDIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLTKADFDATVGVHPTA 517 (551)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~~~~l~~~~~~~pt~ 517 (551)
+..+.+ .. ......|++++. ++|+|+|++++|+.+.+++....++++.+++.++|.+..+++..+
T Consensus 347 --~~~~~~-~~----------~~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~ 411 (431)
T 1q1r_A 347 --YDRIIV-RG----------SLAQPDFSVFYL--QGDRVLAVDTVNRPVEFNQSKQIITDRLPVEPNLLGDESVPLKEI 411 (431)
T ss_dssp --CSEEEE-EE----------ETTTTEEEEEEE--ETTEEEEEEEESCHHHHHHHHHHHHTTCCCCHHHHTCTTSCHHHH
T ss_pred --CCEEEE-Ec----------cCCCCeEEEEEE--eCCEEEEEEEECChHHHHHHHHHHHCCCCCCHHHhhCCCCCHHHH
Confidence 111211 11 123456777654 479999999999998899988888899999999998877665544
No 46
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=2.3e-42 Score=358.62 Aligned_cols=360 Identities=20% Similarity=0.265 Sum_probs=272.0
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCC--cEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGA--SVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
+++||+|||||+||+++|..|++.|. +|+|||+ ...++ +..|..++.++.... .+ ..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~---------~~~~~----~~~~~~~~~~~~~~~-~~------~~- 64 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGD---------EAERP----YDRPPLSKDFMAHGD-AE------KI- 64 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEES---------SCSCC----BCSGGGGTHHHHHCC-GG------GS-
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEEC---------CCCCc----ccCCCCCHHHhCCCc-hh------hh-
Confidence 35899999999999999999999887 5999993 11111 111111111111000 00 00
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIVDP--HTVDV-DGKLYSARHILISVGGRPFIP 224 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~p 224 (551)
. +. .+.+.+++++.++ +..++. +++.+ +++.+.||+||+|||++|..|
T Consensus 65 -------~--------------------~~-~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~ 116 (408)
T 2gqw_A 65 -------R--------------------LD-CKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRAL 116 (408)
T ss_dssp -------B--------------------CC-CTTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCC
T ss_pred -------h--------------------HH-HHHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCC
Confidence 0 00 2345589999985 777774 67777 677899999999999999999
Q ss_pred CC-CCCC-ce---ecchhhhcCC---CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHHHH
Q 008841 225 DI-PGSE-YA---IDSDAALDLP---SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVAEQ 295 (551)
Q Consensus 225 ~i-~g~~-~~---~~~~~~~~~~---~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~ 295 (551)
++ ||.+ .+ .+.++...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.
T Consensus 117 ~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 196 (408)
T 2gqw_A 117 PTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARY 196 (408)
T ss_dssp GGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHH
T ss_pred CccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHH
Confidence 98 8874 33 3555554432 24789999999999999999999999999999999999885 899999999999
Q ss_pred HHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCc
Q 008841 296 MSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPS 375 (551)
Q Consensus 296 l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 375 (551)
+++.||+++++++|++++ + + .|++.+|+++++|.||+|+|++|++++ ++..+++++ +| |.||+++||+.|+
T Consensus 197 l~~~GV~i~~~~~v~~i~-~-~---~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~~~t~~~~ 267 (408)
T 2gqw_A 197 HAAQGVDLRFERSVTGSV-D-G---VVLLDDGTRIAADMVVVGIGVLANDAL--ARAAGLACD-DG-IFVDAYGRTTCPD 267 (408)
T ss_dssp HHHTTCEEEESCCEEEEE-T-T---EEEETTSCEEECSEEEECSCEEECCHH--HHHHTCCBS-SS-EECCTTCBCSSTT
T ss_pred HHHcCcEEEeCCEEEEEE-C-C---EEEECCCCEEEcCEEEECcCCCccHHH--HHhCCCCCC-CC-EEECCCCccCCCC
Confidence 999999999999999998 3 2 477889989999999999999999987 677888876 45 9999999999999
Q ss_pred EEEeCcCCCCC----------CChHHHHHhHHHHHHHHcCCCCCCCCCCCccEEE--ecCCceEEeeCCHHHHHhcCCCe
Q 008841 376 IWAVGDVTDRI----------NLTPVALMEGGALAKTLFQAEPTKPDYSAVPSAV--FSQPPIGQVGLSEEQAIQEYGDI 443 (551)
Q Consensus 376 vya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~--~~~~~~~~vGl~~~~a~~~~~~~ 443 (551)
|||+|||+..+ .++..|..||+++|.||+|... .+|..+|+.+ +.+++++++|+ +. ..+.
T Consensus 268 IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~~~p~~~~~~~~~~~~~~G~-~~-----~~~~ 339 (408)
T 2gqw_A 268 VYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA--PGYAELPWYWSDQGALRIQVAGL-AS-----GDEE 339 (408)
T ss_dssp EEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS--CCCCCCCEEEEEETTEEEEEEEC-SC-----CSEE
T ss_pred EEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC--CcCCCCCeEEEEECCceEEEECC-CC-----CCEE
Confidence 99999999853 3678999999999999998653 1566677653 33579999998 21 1111
Q ss_pred EEEEeeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCC--HHHHcc
Q 008841 444 DVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLT--KADFDA 509 (551)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~--~~~l~~ 509 (551)
+.... ......+|.+++++ +|+|+|++++|+.+ .+..+..+|+++.+ ..+|.+
T Consensus 340 -~~~~~--------~~~~~~~~~~~~~~--~~~l~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~l~~ 394 (408)
T 2gqw_A 340 -IVRGE--------VSLDAPKFTLIELQ--KGRIVGATCVNNAR--DFAPLRRLLAVGAKPDRAALAD 394 (408)
T ss_dssp -EEESC--------CCSSSCCEEEEEEE--TTEEEEEEEESCHH--HHHHHHHHHHTTCCCCHHHHHC
T ss_pred -EEEcc--------CCCCCCeEEEEEEe--CCEEEEEEEECChH--HHHHHHHHHHCCCCCChHHhcC
Confidence 11100 00114568888774 79999999999875 35788999999984 455544
No 47
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=5.9e-42 Score=356.79 Aligned_cols=366 Identities=22% Similarity=0.288 Sum_probs=273.3
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCc--EEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGAS--VAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~--V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
+++||||||||+||+++|..|++.|++ |+|||+ ....+... .| +. ..+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~---------~~~~~y~~-----~~---------l~------~~~- 57 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGR---------EPEIPYER-----PP---------LS------KEY- 57 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEES---------SSSCCBCS-----GG---------GG------TTT-
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEec---------CCCCCcCc-----cc---------CC------HHH-
Confidence 468999999999999999999999987 999993 11111000 00 00 000
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP--HTVDV-DGKLYSARHILISVGGRPFIP 224 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~p 224 (551)
+ .+ ......+. .....++.+.+++++.+ ++..++. +.+.+ +++.+.||++|+|||++|+.|
T Consensus 58 ~--~~--~~~~~~~~-----------~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 58 L--AR--EKTFERIC-----------IRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp T--TT--SSCSGGGB-----------SSCHHHHHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCC
T ss_pred H--cC--CCCHHHhc-----------cCCHHHHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCC
Confidence 0 00 00000000 00112345669999998 6777765 46666 678999999999999999999
Q ss_pred CCCCCC--cee---cchhhhcCC---CC-CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHHH
Q 008841 225 DIPGSE--YAI---DSDAALDLP---SK-PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVAE 294 (551)
Q Consensus 225 ~i~g~~--~~~---~~~~~~~~~---~~-~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~ 294 (551)
++||.+ .++ +.++...+. .. +++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+
T Consensus 123 ~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~ 202 (415)
T 3lxd_A 123 SCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQA 202 (415)
T ss_dssp BTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHH
T ss_pred CCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHH
Confidence 999864 333 444444332 12 789999999999999999999999999999999999886 89999999999
Q ss_pred HHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCC
Q 008841 295 QMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVP 374 (551)
Q Consensus 295 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 374 (551)
.+++.||++++++.|++++.++++...|.+.+|++++||.||+|+|.+|++++ ++.++++++ +| |.||+++||+.|
T Consensus 203 ~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~vd~~~~t~~~ 278 (415)
T 3lxd_A 203 EHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGA--LISAGASGG-NG-VDVDEFCRTSLT 278 (415)
T ss_dssp HHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHH--HHHTTCCCS-SS-EECCTTCBCSST
T ss_pred HHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHH--HHhCCCCcC-CC-EEECCCCCcCCC
Confidence 99999999999999999998766645799999999999999999999999987 678888877 44 999999999999
Q ss_pred cEEEeCcCCCCCC-----------ChHHHHHhHHHHHHHHcCCCCCCCCCCCccE--EEecCCceEEeeCCHHHHHhcCC
Q 008841 375 SIWAVGDVTDRIN-----------LTPVALMEGGALAKTLFQAEPTKPDYSAVPS--AVFSQPPIGQVGLSEEQAIQEYG 441 (551)
Q Consensus 375 ~vya~GD~~~~~~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~--~~~~~~~~~~vGl~~~~a~~~~~ 441 (551)
+|||+|||+..+. ++..|..||+++|+||+|... .|..+|+ .-+.+..+.++|+++. +.
T Consensus 279 ~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~-----~~ 350 (415)
T 3lxd_A 279 DVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPV---PYKATPWFWSNQYDLKLQTVGLSTG-----HD 350 (415)
T ss_dssp TEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCC---CCCCCCEEEEEETTEEEEEEECCTT-----CS
T ss_pred CEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCC---CCCCCCeeEeeeCCcEEEEEeCCCC-----CC
Confidence 9999999997542 478999999999999998653 4666675 3444678999998742 11
Q ss_pred CeEEEEeeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCC--CHHHHc
Q 008841 442 DIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGL--TKADFD 508 (551)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~--~~~~l~ 508 (551)
++ +... +.....|.++++ ++|+|+|+..+|... ....+..+|..+. +.++|.
T Consensus 351 ~~-~~~~----------~~~~~~~~~~~~--~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~ 404 (415)
T 3lxd_A 351 NA-VLRG----------DPATRSFSVVYL--KGGKVVALDCVNMVK--DYVQGKKLVEARAQIAPEQLA 404 (415)
T ss_dssp EE-EEEE----------EGGGTEEEEEEE--ETTEEEEEEEESCHH--HHHHHHHHHHHTCCCCHHHHT
T ss_pred EE-EEEe----------cCCCCeEEEEEE--ECCEEEEEEEECChH--HHHHHHHHHHCCCCCCHHHhc
Confidence 11 1111 123456999998 479999999999853 2334555666654 445554
No 48
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=3.5e-41 Score=350.14 Aligned_cols=362 Identities=18% Similarity=0.196 Sum_probs=269.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCc--EEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGAS--VAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~--V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+||+|||||+||+++|..|++.|++ |+|||+ ....+.. ...++...+ ... ..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~---------~~~~~y~---~~~l~~~~~----------~g~----~~ 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGD---------EPHLPYD---RPSLSKAVL----------DGS----LE 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEC---------SSSSSBC---SGGGGTHHH----------HTS----SS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEEC---------CCCCCcC---CccccHHHh----------CCC----CC
Confidence 5899999999999999999999987 999993 1111100 000000000 000 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP--HTVDV-DGKLYSARHILISVGGRPFIPDI 226 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~p~i 226 (551)
.. .. ... ..++.+.+++++.+ ++..++. +.+.+ +++.+.||+||+|||++|+.|++
T Consensus 57 ~~-~~-~~~------------------~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i 116 (410)
T 3ef6_A 57 RP-PI-LAE------------------ADWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMAL 116 (410)
T ss_dssp SC-CB-SSC------------------TTHHHHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCC
T ss_pred HH-Hh-cCC------------------HHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCCC
Confidence 00 00 000 12344568999998 7887775 46766 67789999999999999999999
Q ss_pred CCCC--cee---cchhhhcCC---CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHHHHHH
Q 008841 227 PGSE--YAI---DSDAALDLP---SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVAEQMS 297 (551)
Q Consensus 227 ~g~~--~~~---~~~~~~~~~---~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~ 297 (551)
||.+ .++ +.++...+. ..+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.++
T Consensus 117 pG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~ 196 (410)
T 3ef6_A 117 PGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLT 196 (410)
T ss_dssp TTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHH
T ss_pred CCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHH
Confidence 9864 233 445444332 34789999999999999999999999999999999998875 89999999999999
Q ss_pred hcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEE
Q 008841 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIW 377 (551)
Q Consensus 298 ~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vy 377 (551)
+.||++++++.|++++.++ ....|++.+|+++++|.||+|+|++|++++ ++.+|++++ + +|.||++++|+.|+||
T Consensus 197 ~~GV~i~~~~~v~~i~~~~-~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~-gi~vd~~~~t~~~~Iy 271 (410)
T 3ef6_A 197 ELGVQVELGTGVVGFSGEG-QLEQVMASDGRSFVADSALICVGAEPADQL--ARQAGLACD-R-GVIVDHCGATLAKGVF 271 (410)
T ss_dssp HHTCEEECSCCEEEEECSS-SCCEEEETTSCEEECSEEEECSCEEECCHH--HHHTTCCBS-S-SEECCTTSBCSSTTEE
T ss_pred HCCCEEEeCCEEEEEeccC-cEEEEEECCCCEEEcCEEEEeeCCeecHHH--HHhCCCccC-C-eEEEccCeeECCCCEE
Confidence 9999999999999998755 335789999999999999999999999987 788899887 4 4999999999999999
Q ss_pred EeCcCCCCC---------CChHHHHHhHHHHHHHHcCCCCCCCCCCCccEE--EecCCceEEeeCCHHHHHhcCCCeEEE
Q 008841 378 AVGDVTDRI---------NLTPVALMEGGALAKTLFQAEPTKPDYSAVPSA--VFSQPPIGQVGLSEEQAIQEYGDIDVF 446 (551)
Q Consensus 378 a~GD~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~--~~~~~~~~~vGl~~~~a~~~~~~~~~~ 446 (551)
|+|||+..+ +++..|..||+++|+||+|.. ..|..+|+. .+.+..+.++|+++.. +-.+.
T Consensus 272 A~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~---~~~~~~p~~~~~~~~~~~~~~G~~~~~------~~~~~ 342 (410)
T 3ef6_A 272 AVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN---VSAPQLPVSWTEIAGHRMQMAGDIEGP------GDFVS 342 (410)
T ss_dssp ECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC---CCCCBCCEEEEEETTEEEEEESCSSSS------SEEEE
T ss_pred EEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC---CCCCCCCeeEEEECCceEEEEcCCCCC------CEEEE
Confidence 999999753 358899999999999999865 345666753 3446788999987531 11111
Q ss_pred EeeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCC--CHHHHc
Q 008841 447 TANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGL--TKADFD 508 (551)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~--~~~~l~ 508 (551)
.. +.....|.++++ ++|+|+|++++|.... ...+..+|+++. +.++|.
T Consensus 343 ~~----------~~~~~~~~~~~~--~~~~l~g~~~~~~~~~--~~~~~~~i~~~~~~~~~~l~ 392 (410)
T 3ef6_A 343 RG----------MPGSGAALLFRL--QERRIQAVVAVDAPRD--FALATRLVEARAAIEPARLA 392 (410)
T ss_dssp ES----------CTTSSSEEEEEE--ETTEEEEEEEESCHHH--HHHHHHHHHHTCBCCHHHHH
T ss_pred Ee----------eCCCCeEEEEEE--ECCEEEEEEEECChHH--HHHHHHHHhCCCCCCHHHhc
Confidence 10 123345888877 5799999999998532 334555566554 555554
No 49
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=8.8e-41 Score=346.62 Aligned_cols=364 Identities=20% Similarity=0.226 Sum_probs=271.5
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGA--SVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+||+|||||+||+++|..|++.|+ +|+|||+ ....+.. ..|- .. .+......
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~---------~~~~~y~-----~~~l---------~~---~~l~~~~~ 55 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALIND---------EKHLPYQ-----RPPL---------SK---AYLKSGGD 55 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECC---------SSSSSBC-----SGGG---------GT---GGGGSCCC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeC---------CCCCCCC-----CccC---------CH---HHHCCCCC
Confidence 589999999999999999999998 8999993 1111100 0000 00 00000000
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--HTVDV-DGKLYSARHILISVGGRPFIPDIP 227 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~p~i~ 227 (551)
.. ..... ....+.+.+++++..++..++. +.+.+ +++.+.||+||+|||++|+.|++|
T Consensus 56 ~~-~~~~~------------------~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~ 116 (404)
T 3fg2_P 56 PN-SLMFR------------------PEKFFQDQAIELISDRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVP 116 (404)
T ss_dssp TT-SSBSS------------------CHHHHHHTTEEEECCCEEEEETTTTEEEESSSCEEECSEEEECCCEEECCCCST
T ss_pred HH-HccCC------------------CHHHHHhCCCEEEEEEEEEEECCCCEEEECCCCEEECCEEEEeeCCCccCCCCC
Confidence 00 00000 1123445689988877777764 46666 678999999999999999999999
Q ss_pred CCC--cee---cchhhhcC---CCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHHHHHHh
Q 008841 228 GSE--YAI---DSDAALDL---PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVAEQMSL 298 (551)
Q Consensus 228 g~~--~~~---~~~~~~~~---~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~ 298 (551)
|.+ .++ +.++...+ ...+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.+++
T Consensus 117 g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~ 196 (404)
T 3fg2_P 117 NASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSG 196 (404)
T ss_dssp TTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHh
Confidence 864 233 34443332 224789999999999999999999999999999999998876 899999999999999
Q ss_pred cCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEE
Q 008841 299 RGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWA 378 (551)
Q Consensus 299 ~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya 378 (551)
.||+++++++|++++.+++....|.+.+|+++++|.||+|+|.+|++++ ++.++++++ +| |.||+++||+.|+|||
T Consensus 197 ~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~G-i~vd~~~~t~~~~iya 272 (404)
T 3fg2_P 197 AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEI--AAAAGLPTA-AG-IIVDQQLLTSDPHISA 272 (404)
T ss_dssp TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EEECTTSBCSSTTEEE
T ss_pred CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHH--HHhCCCCCC-CC-EEECCCcccCCCCEEE
Confidence 9999999999999988766555789999999999999999999999987 678888887 45 9999999999999999
Q ss_pred eCcCCCCC----------CChHHHHHhHHHHHHHHcCCCCCCCCCCCccE--EEecCCceEEeeCCHHHHHhcCCCeEEE
Q 008841 379 VGDVTDRI----------NLTPVALMEGGALAKTLFQAEPTKPDYSAVPS--AVFSQPPIGQVGLSEEQAIQEYGDIDVF 446 (551)
Q Consensus 379 ~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~--~~~~~~~~~~vGl~~~~a~~~~~~~~~~ 446 (551)
+|||+..+ .++..|..||+++|+||+|... .|..+|+ +-+.+..+.++|+... + +-.+.
T Consensus 273 ~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~-----~-~~~~~ 343 (404)
T 3fg2_P 273 IGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAK---PYDGYPWFWSDQGDDKLQIVGLTAG-----F-DQVVI 343 (404)
T ss_dssp CGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCC---CCCCCCEEEEEETTEEEEEEECCTT-----C-CEEEE
T ss_pred eecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCC---CCCCCCceEeEECCcEEEEEeCCCC-----C-CEEEE
Confidence 99999853 2578999999999999998653 4666665 3444678899998742 1 11121
Q ss_pred EeeccCcccccccCCCcEEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCC--HHHHc
Q 008841 447 TANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLHMCGEDAPEIVQGFAVAVKAGLT--KADFD 508 (551)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~~e~i~~~~~~i~~~~~--~~~l~ 508 (551)
.. +.....|.++++ ++|+|+|+.++|... ....+..+|+.+.. .++|.
T Consensus 344 ~~----------~~~~~~~~~~~~--~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~ 393 (404)
T 3fg2_P 344 RG----------SVAERSFSAFCY--KAGKLIGIESVNRAA--DHVFGRKILPLDKSVTPEQAA 393 (404)
T ss_dssp EE----------ETTTTEEEEEEE--ETTEEEEEEEESCHH--HHHHHHHHTTTTCCCCHHHHH
T ss_pred Ee----------cCCCCcEEEEEE--ECCEEEEEEEeCCHH--HHHHHHHHHHcCCCCCHHHhc
Confidence 11 234567999998 479999999999853 34456667777654 44443
No 50
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.7e-39 Score=321.43 Aligned_cols=283 Identities=20% Similarity=0.255 Sum_probs=210.5
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.+|||+||||||||++||.+|++.|++|+||| ++.+||+|.+.+|+|.. +.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE----------~~~~gG~~~~~~~i~~~---------------p~---- 55 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIE----------RGIPGGQMANTEEVENF---------------PG---- 55 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTGGGGGCSCBCCS---------------TT----
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEe----------cCCCCCeeecccccCCc---------------CC----
Confidence 36999999999999999999999999999999 67899999999998731 11
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEE-EEe--cCCE-EEEcCEEEEeCeEEEcCCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRG-KIV--DPHT-VDVDGKLYSARHILISVGGRPFIPDI 226 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~i--~~~~-v~v~g~~~~~d~lviAtG~~p~~p~i 226 (551)
.......++..+.. ....+.+..+..+.. ... .... +..+++++.||++|||||++|+.|++
T Consensus 56 ---~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~i 121 (312)
T 4gcm_A 56 ---FEMITGPDLSTKMF-----------EHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGV 121 (312)
T ss_dssp ---CSSBCHHHHHHHHH-----------HHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCC
T ss_pred ---ccccchHHHHHHHH-----------HHHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCC
Confidence 11223333322221 223344555554421 111 1222 22378899999999999999999999
Q ss_pred CCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCc
Q 008841 227 PGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGI 301 (551)
Q Consensus 227 ~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv 301 (551)
||.+. +............+++++|||+|++|+|+|..|+++|.+||++++.+++++.. ....+.+++.++
T Consensus 122 pG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~-----~~~~~~~~~~~~ 196 (312)
T 4gcm_A 122 PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQR-----ILQDRAFKNDKI 196 (312)
T ss_dssp TTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH-----HHHHHHHHCTTE
T ss_pred CChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcch-----hHHHHHHHhcCc
Confidence 99753 22222222222347899999999999999999999999999999999876531 223456777889
Q ss_pred EEEcCcccEEEEEcCCce--EEEE-E--CCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcE
Q 008841 302 EFHTEESPQAILKSTDGS--LSVK-T--NKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSI 376 (551)
Q Consensus 302 ~i~~~~~v~~i~~~~~~~--~~V~-~--~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~v 376 (551)
.......+..+...+... .... . .++..+++|.|++++|..|+..+ ++..++. +++|+|.||+++|||+|||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~--~~~~g~~-~~~G~I~vd~~~~Ts~pgI 273 (312)
T 4gcm_A 197 DFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAP--FKDLGIT-NDVGYIVTKDDMTTSVPGI 273 (312)
T ss_dssp EEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GGGGTCB-CTTSCBCCCTTSBCSSTTE
T ss_pred ceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchh--HHhccee-cCCCeEeeCCCCccCCCCE
Confidence 988887777766554321 1111 1 23457899999999999999987 6677775 5678999999999999999
Q ss_pred EEeCcCCCC-CCChHHHHHhHHHHHHHHc
Q 008841 377 WAVGDVTDR-INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 377 ya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 404 (551)
||+|||++. +.+++.|+.||++||.||.
T Consensus 274 yA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 274 FAAGDVRDKGLRQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp EECSTTBSCSCCSHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCcchHHHHHHHHHHHHHHHHH
Confidence 999999974 5789999999999999985
No 51
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=6.6e-39 Score=321.06 Aligned_cols=290 Identities=22% Similarity=0.244 Sum_probs=215.2
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
|++.|||+||||||||++||.+|++.|++|+||| +...||.|.+ ||+|++.++ .+++.|
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE----------~~~~gg~~~~-G~~~~~~~i---------~~~~g~- 59 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYE----------GFMAGGVAAG-GQLTTTTII---------ENFPGF- 59 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEEC----------CSSGGGCCTT-CGGGGSSEE---------CCSTTC-
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEe----------cCCCCCcccC-CCcCChHHh---------hhccCC-
Confidence 5667999999999999999999999999999999 6778899886 888864321 122211
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC----CEEEE-cCEEEEeCeEEEcCCCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP----HTVDV-DGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~----~~v~v-~g~~~~~d~lviAtG~~p~~ 223 (551)
...++..++..+ ......+.++++....+..... ..+.. ++.++.||+||||||++|+.
T Consensus 60 -----~~~i~~~~l~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 60 -----PNGIDGNELMMN-----------MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp -----TTCEEHHHHHHH-----------HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECC
T ss_pred -----cccCCHHHHHHH-----------HHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccc
Confidence 112233433332 2234455677777665544322 23333 67789999999999999999
Q ss_pred CCCCCCCc-----eecchhhhcCC--CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHH
Q 008841 224 PDIPGSEY-----AIDSDAALDLP--SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQM 296 (551)
Q Consensus 224 p~i~g~~~-----~~~~~~~~~~~--~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l 296 (551)
|++||.+. +.......... ..+++++|||+|++|+|+|..|+++|.+|+++++.+.... .+ ....+.+
T Consensus 124 ~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~--~~---~~~~~~~ 198 (314)
T 4a5l_A 124 MHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA--SK---TMQERVL 198 (314)
T ss_dssp CCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CH---HHHHHHH
T ss_pred cCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc--cc---hhhhhhh
Confidence 99999642 22333222222 2478999999999999999999999999999998776433 22 2334556
Q ss_pred HhcCcEEEcCcccEEEEEcCCceEEEEE-----CCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCC
Q 008841 297 SLRGIEFHTEESPQAILKSTDGSLSVKT-----NKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGT 371 (551)
Q Consensus 297 ~~~Gv~i~~~~~v~~i~~~~~~~~~V~~-----~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t 371 (551)
...+++.+..+.+.++...++....+.+ .+++++++|.|++|+|+.||++++. ..+.++++|.+ ||+++||
T Consensus 199 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~---~~~~~~~~G~i-v~~~~~T 274 (314)
T 4a5l_A 199 NHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLG---GQVKTADDGYI-LTEGPKT 274 (314)
T ss_dssp TCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT---TSSCBCTTSCB-CCBTTBC
T ss_pred cccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhc---ccceEcCCeeE-eCCCCcc
Confidence 6778999999889998876554222322 3456899999999999999999743 35677887755 8999999
Q ss_pred CCCcEEEeCcCCCCC-CChHHHHHhHHHHHHHHc
Q 008841 372 AVPSIWAVGDVTDRI-NLTPVALMEGGALAKTLF 404 (551)
Q Consensus 372 ~~~~vya~GD~~~~~-~~~~~A~~~g~~aa~~i~ 404 (551)
|+|||||+|||++.+ +++..|+.||++||.++.
T Consensus 275 s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 275 SVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp SSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999999875 588899999999998874
No 52
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=6e-38 Score=332.96 Aligned_cols=321 Identities=19% Similarity=0.253 Sum_probs=226.5
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhcc
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESN 145 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~ 145 (551)
+|+.++||||||||+||++||..|++. |.+|+|||+ ...++ +..|.+++.++..... .......
T Consensus 7 ~~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~---------~~~~~----y~r~~lsk~l~~~~~~-~~~~~~~ 72 (493)
T 1m6i_A 7 KAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSE---------DPELP----YMRPPLSKELWFSDDP-NVTKTLR 72 (493)
T ss_dssp -CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEES---------SSSCC----BCSGGGGTGGGCC--C-THHHHCE
T ss_pred CCCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeC---------CCCCC----CCCCCCCHHhhcCCcc-chhhccc
Confidence 344578999999999999999999885 899999993 11121 2234455554432211 0000000
Q ss_pred CCCcccCC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEec--CCEEEE-cCEEEEeCeEEEcCCCC
Q 008841 146 GFGWKYGT-EPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVD--PHTVDV-DGKLYSARHILISVGGR 220 (551)
Q Consensus 146 ~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~--~~~v~v-~g~~~~~d~lviAtG~~ 220 (551)
..+|.... ...+.....+... ..+ ..+.+.+++++.+ .+..++ .+++.+ +++.+.||+||||||++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~----~~l-----~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 73 FKQWNGKERSIYFQPPSFYVSA----QDL-----PHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGT 143 (493)
T ss_dssp EECTTSCEEESBSSCGGGSBCT----TTT-----TTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEE
T ss_pred ccccccccccccccchHhhcch----hhh-----hhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCC
Confidence 00110000 0000000000000 000 0012458999987 566665 467777 67889999999999999
Q ss_pred CCCCCCCCC------Cce---ecchhhhcCC---CCCCeEEEEcCcHHHHHHHHHHHh----CCCeEEEEeecCccCCC-
Q 008841 221 PFIPDIPGS------EYA---IDSDAALDLP---SKPEKIAIVGGGYIALEFAGIFSG----LTSEVHVFIRQKKVLRG- 283 (551)
Q Consensus 221 p~~p~i~g~------~~~---~~~~~~~~~~---~~~~~vvViG~G~~g~e~a~~l~~----~g~~Vtlv~~~~~~l~~- 283 (551)
|+.|++++. +.+ .+.+++..+. ..+++++|||+|++|+|+|..|.+ .|.+|+++++.+.++..
T Consensus 144 p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~ 223 (493)
T 1m6i_A 144 PRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI 223 (493)
T ss_dssp ECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT
T ss_pred CCCCCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc
Confidence 988776542 122 2444444332 237899999999999999999876 57899999988776655
Q ss_pred CCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecC-CCC
Q 008841 284 FDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTK-NGA 362 (551)
Q Consensus 284 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~-~G~ 362 (551)
+++++.+.+.+.++++||++++++.|++++.+++. +.|.+.+|+++++|.||+|+|.+|++++ ++.+++++++ +|+
T Consensus 224 l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~-~~v~l~dG~~i~aD~Vv~a~G~~pn~~l--~~~~gl~~~~~~gg 300 (493)
T 1m6i_A 224 LPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGK-LLIKLKDGRKVETDHIVAAVGLEPNVEL--AKTGGLEIDSDFGG 300 (493)
T ss_dssp SCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECCCEEECCTT--HHHHTCCBCTTTCS
T ss_pred CCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCe-EEEEECCCCEEECCEEEECCCCCccHHH--HHHcCCccccCCCc
Confidence 78899999999999999999999999999876544 6788999999999999999999999987 6788898885 689
Q ss_pred eEeCCCCCCCCCcEEEeCcCCCC---------CCChHHHHHhHHHHHHHHcCCCCCCCCCCCccE
Q 008841 363 IEVDEYSGTAVPSIWAVGDVTDR---------INLTPVALMEGGALAKTLFQAEPTKPDYSAVPS 418 (551)
Q Consensus 363 i~vd~~~~t~~~~vya~GD~~~~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~ 418 (551)
|.||+++|| .|+|||+|||+.. ..++..|..||++||.||+|... .|...|+
T Consensus 301 i~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~---~~~~~~~ 361 (493)
T 1m6i_A 301 FRVNAELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAK---PYWHQSM 361 (493)
T ss_dssp EECCTTCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCCC---CCCCCCE
T ss_pred EEECCCccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCCC---CcCCcCc
Confidence 999999998 6999999999973 24577999999999999998643 3444444
No 53
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=6.1e-37 Score=308.44 Aligned_cols=287 Identities=21% Similarity=0.270 Sum_probs=215.9
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCC
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGF 147 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 147 (551)
+|..++||+|||||++|+++|..|++.|++|+||| +..+||.|.+..++. .++.+
T Consensus 4 ~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~~~gg~~~~~~~~~---------------~~~~~ 58 (325)
T 2q7v_A 4 PTAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILE----------KGMPGGQIAWSEEVE---------------NFPGF 58 (325)
T ss_dssp CCCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTGGGGGCSCBC---------------CSTTC
T ss_pred CccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEe----------CCCCCcccccccccc---------------cCCCC
Confidence 34456899999999999999999999999999999 446788887543321 01111
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC-------CEEEE-cCEEEEeCeEEEcCCC
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP-------HTVDV-DGKLYSARHILISVGG 219 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~-------~~v~v-~g~~~~~d~lviAtG~ 219 (551)
. ..+.+..+.. .+.+.+.+.+++++.+++..++. ..+.. +++.+.||+||+|||+
T Consensus 59 ~------~~~~~~~~~~-----------~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 59 P------EPIAGMELAQ-----------RMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA 121 (325)
T ss_dssp S------SCBCHHHHHH-----------HHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCE
T ss_pred C------CCCCHHHHHH-----------HHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCC
Confidence 0 1123333222 22344566789988877665542 24444 6778999999999999
Q ss_pred CCCCCCCCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHH
Q 008841 220 RPFIPDIPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAE 294 (551)
Q Consensus 220 ~p~~p~i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~ 294 (551)
.|..|++||.+. +............+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+ ..+
T Consensus 122 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~~~~---~~~ 196 (325)
T 2q7v_A 122 DPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA--NKVA---QAR 196 (325)
T ss_dssp EECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS--CHHH---HHH
T ss_pred CcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc--chHH---HHH
Confidence 999999998642 222222222223468999999999999999999999999999999887542 3332 223
Q ss_pred HHHhcCcEEEcCcccEEEEEcCCceEEEEEC---CCe--EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCC
Q 008841 295 QMSLRGIEFHTEESPQAILKSTDGSLSVKTN---KGT--VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYS 369 (551)
Q Consensus 295 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~ 369 (551)
.+++.||+++++++++++..++ +...|.+. +|+ ++++|.||+|+|++|++++ ++.. ++++++|+|.||+++
T Consensus 197 l~~~~gv~i~~~~~v~~i~~~~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~-~~~~~~g~i~vd~~~ 272 (325)
T 2q7v_A 197 AFANPKMKFIWDTAVEEIQGAD-SVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAF--VKDT-VSLRDDGYVDVRDEI 272 (325)
T ss_dssp HHTCTTEEEECSEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCBTTT
T ss_pred HHhcCCceEecCCceEEEccCC-cEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHH--Hhhh-cccCCCccEecCCCC
Confidence 3345699999999999998753 32355554 665 7899999999999999987 4555 777888999999999
Q ss_pred CCCCCcEEEeCcCCCC-CCChHHHHHhHHHHHHHHcC
Q 008841 370 GTAVPSIWAVGDVTDR-INLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 370 ~t~~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~g 405 (551)
+|+.|+|||+|||+.. ++++..|..||+++|.||..
T Consensus 273 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 273 YTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp BCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987 68999999999999999863
No 54
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=7.7e-37 Score=305.66 Aligned_cols=283 Identities=21% Similarity=0.238 Sum_probs=215.0
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA-SVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+|||+|||||++|+++|..|++.|+ +|+||| +...||.|.+..++.. ++.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie----------~~~~gg~~~~~~~~~~---------------~~~~--- 52 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFE----------KGMPGGQITGSSEIEN---------------YPGV--- 52 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEEC----------SSSTTCGGGGCSCBCC---------------STTC---
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEc----------CCCCCccccccccccc---------------CCCC---
Confidence 3799999999999999999999999 999999 4568888876443220 1111
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEec--CC--EEEE-cCEEEEeCeEEEcCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVD--PH--TVDV-DGKLYSARHILISVGGRPFIPD 225 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~--~~--~v~v-~g~~~~~d~lviAtG~~p~~p~ 225 (551)
...++...+..+ +.+.+.+.+++++..++..++ .. .+.+ +++.+.||+||+|||+.|..|+
T Consensus 53 ---~~~~~~~~~~~~-----------l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~ 118 (311)
T 2q0l_A 53 ---KEVVSGLDFMQP-----------WQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTG 118 (311)
T ss_dssp ---CSCBCHHHHHHH-----------HHHHHHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCC
T ss_pred ---cccCCHHHHHHH-----------HHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCC
Confidence 012233333222 223445668888776665554 33 3434 6678999999999999999999
Q ss_pred CCCCC-----ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHH-hc
Q 008841 226 IPGSE-----YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMS-LR 299 (551)
Q Consensus 226 i~g~~-----~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~-~~ 299 (551)
+||.+ .++...........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++. +.+.+. +.
T Consensus 119 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~----~~~~l~~~~ 192 (311)
T 2q0l_A 119 IKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR--CAPI----TLEHAKNND 192 (311)
T ss_dssp CBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--SCHH----HHHHHHTCT
T ss_pred CCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--CCHH----HHHHHhhCC
Confidence 98853 233332222222346899999999999999999999999999999988753 3443 334444 57
Q ss_pred CcEEEcCcccEEEEEcCCceEEEEEC---CCe--EEEeeEEEEecCcCCCCCCCCccccC----eeecCCCCeEeCCCCC
Q 008841 300 GIEFHTEESPQAILKSTDGSLSVKTN---KGT--VDGFSHVMFATGRRPNTKNLGLEKVG----VKMTKNGAIEVDEYSG 370 (551)
Q Consensus 300 Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G~--~i~~d~vi~a~G~~p~~~~l~l~~~g----l~~~~~G~i~vd~~~~ 370 (551)
||++++++.++++..++++...|.+. +|+ ++++|.||+|+|+.|++++ ++..+ ++++++|+|.||+++|
T Consensus 193 gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~l~~~~~g~i~vd~~~~ 270 (311)
T 2q0l_A 193 KIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAV--LKQEDNSMLCKCDEYGSIVVDFSMK 270 (311)
T ss_dssp TEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGG--GBCTTSCBSSCBCTTSCBCCCTTCB
T ss_pred CeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhh--hhcccccceeEeccCCCEEeCCccc
Confidence 99999999999998765542345554 665 6899999999999999987 45553 8888889999999999
Q ss_pred CCCCcEEEeCcCCCC-CCChHHHHHhHHHHHHHHc
Q 008841 371 TAVPSIWAVGDVTDR-INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 371 t~~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 404 (551)
|+.|+|||+|||+.. ++++..|..||+++|.||.
T Consensus 271 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 271 TNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVI 305 (311)
T ss_dssp CSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHH
Confidence 999999999999987 6899999999999999986
No 55
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.4e-37 Score=307.03 Aligned_cols=286 Identities=23% Similarity=0.292 Sum_probs=217.2
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCC
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGF 147 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 147 (551)
.|..++||+|||||++|+++|..|++.|++|+||| +...||.|.+..++. .++.+
T Consensus 12 ~m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~~~gg~~~~~~~~~---------------~~~~~ 66 (319)
T 3cty_A 12 EKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILD----------KAVAGGLTAEAPLVE---------------NYLGF 66 (319)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSSTTGGGGGCSCBC---------------CBTTB
T ss_pred cccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEe----------CCCCCccccccchhh---------------hcCCC
Confidence 35557999999999999999999999999999999 456788876543321 01111
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEec--CC--EEEEcCEEEEeCeEEEcCCCCCCC
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVD--PH--TVDVDGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~--~~--~v~v~g~~~~~d~lviAtG~~p~~ 223 (551)
..++...+.. .+...+.+.+++++.+++..++ .. .+.+++..+.||++|+|||+.|..
T Consensus 67 -------~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 67 -------KSIVGSELAK-----------LFADHAANYAKIREGVEVRSIKKTQGGFDIETNDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp -------SSBCHHHHHH-----------HHHHHHHTTSEEEETCCEEEEEEETTEEEEEESSSEEEEEEEEECCCEEECC
T ss_pred -------cccCHHHHHH-----------HHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEECCCEEEeCEEEECCCCCccc
Confidence 1122222222 2233455668888776666554 33 344466789999999999999999
Q ss_pred CCCCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHh
Q 008841 224 PDIPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSL 298 (551)
Q Consensus 224 p~i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 298 (551)
|++||.+. +............+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++ .+.+.+++
T Consensus 129 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~--~~----~l~~~l~~ 202 (319)
T 3cty_A 129 LGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC--EN----AYVQEIKK 202 (319)
T ss_dssp CCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS--CH----HHHHHHHH
T ss_pred CCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC--CH----HHHHHHhc
Confidence 98888642 222222222223468999999999999999999999999999999877532 33 34556678
Q ss_pred cCcEEEcCcccEEEEEcCCceEEEEEC---CCe--EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCC
Q 008841 299 RGIEFHTEESPQAILKSTDGSLSVKTN---KGT--VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAV 373 (551)
Q Consensus 299 ~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~ 373 (551)
.||+++++++++++..+++....|.+. +|+ ++++|.||+|+|+.|++++ ++..+++++++|+|.||+++||+.
T Consensus 203 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~ 280 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSF--LKDSGVKLDERGYIVVDSRQRTSV 280 (319)
T ss_dssp TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGG--GTTSCCCBCTTSCBCCCTTCBCSS
T ss_pred CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHH--HhhccccccCCccEeCCCCCccCC
Confidence 999999999999998865433445553 664 6899999999999999987 567788889899999999999999
Q ss_pred CcEEEeCcCCCC-CCChHHHHHhHHHHHHHHc
Q 008841 374 PSIWAVGDVTDR-INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 374 ~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 404 (551)
|+|||+|||+.. ++++..|+.||++||.||.
T Consensus 281 ~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 281 PGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp TTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 999999999987 5889999999999999986
No 56
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=7.7e-37 Score=305.86 Aligned_cols=286 Identities=19% Similarity=0.227 Sum_probs=220.3
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEE-EccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAI-CELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~l-iE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
.++||+|||||+||+++|..|++.|++|+| +| +..+||.|.+..+++. ++.+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e----------~~~~gG~~~~~~~~~~---------------~~~~-- 55 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFE----------KGMPGGQITSSSEIEN---------------YPGV-- 55 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEEC----------SSSTTGGGGGCSCBCC---------------STTC--
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEe----------CCCCCceeeeeceecc---------------CCCC--
Confidence 358999999999999999999999999999 99 5667898876443321 0110
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEe-cC--CEEE--E--cCEEEEeCeEEEcCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIV-DP--HTVD--V--DGKLYSARHILISVGGRPF 222 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i-~~--~~v~--v--~g~~~~~d~lviAtG~~p~ 222 (551)
.......++..+ +...+.+.+++++.+++..+ +. ..+. + ++ .+.||++|+|||+.|.
T Consensus 56 ----~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~ 119 (315)
T 3r9u_A 56 ----AQVMDGISFMAP-----------WSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPK 119 (315)
T ss_dssp ----CSCBCHHHHHHH-----------HHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEEC
T ss_pred ----CCCCCHHHHHHH-----------HHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCC
Confidence 112233333322 33445667899988877666 33 3333 5 45 8999999999999999
Q ss_pred CCCCCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHH
Q 008841 223 IPDIPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297 (551)
Q Consensus 223 ~p~i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~ 297 (551)
.|++||.+. +.+..........+++++|||+|.+++|+|..|.+.+.+|+++++.+.+. .+++ .+.+.++
T Consensus 120 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~--~~~~---~~~~~~~ 194 (315)
T 3r9u_A 120 KAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR--AAPS---TVEKVKK 194 (315)
T ss_dssp CCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB--SCHH---HHHHHHH
T ss_pred CCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC--CCHH---HHHHHHh
Confidence 999998753 33333333333457899999999999999999999999999999988763 2333 3455567
Q ss_pred hcCcEEEcCcccEEEEEcCCceEEEEEC--CCe--EEEeeEEEEecCcCCCCCCCCc-cccC-eeecCCCCeEeCCCCCC
Q 008841 298 LRGIEFHTEESPQAILKSTDGSLSVKTN--KGT--VDGFSHVMFATGRRPNTKNLGL-EKVG-VKMTKNGAIEVDEYSGT 371 (551)
Q Consensus 298 ~~Gv~i~~~~~v~~i~~~~~~~~~V~~~--~G~--~i~~d~vi~a~G~~p~~~~l~l-~~~g-l~~~~~G~i~vd~~~~t 371 (551)
+.||++++++.+.++..++++...|.+. +|+ ++++|.||+|+|+.|+..++.. +..| ++++++|+|.||+++||
T Consensus 195 ~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t 274 (315)
T 3r9u_A 195 NEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT 274 (315)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC
T ss_pred cCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc
Confidence 8899999999999998876543445554 775 7999999999999999987543 3465 88899999999999999
Q ss_pred CCCcEEEeCcCCC-CCCChHHHHHhHHHHHHHHc
Q 008841 372 AVPSIWAVGDVTD-RINLTPVALMEGGALAKTLF 404 (551)
Q Consensus 372 ~~~~vya~GD~~~-~~~~~~~A~~~g~~aa~~i~ 404 (551)
+.|+|||+|||++ .++.+..|+.||++||.||.
T Consensus 275 ~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 275 SVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp SSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 9999999999986 46889999999999999986
No 57
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2.1e-37 Score=308.82 Aligned_cols=280 Identities=16% Similarity=0.196 Sum_probs=207.9
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
+++|||+||||||||++||++|++.|++|+||| +...||.+.. +++.|
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie----------~~~~gg~~~~--------------------~~~~~-- 51 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFD----------NNTNRNRVTQ--------------------NSHGF-- 51 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------CSCCGGGGSS--------------------CBCCS--
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEe----------CCCCCCeeee--------------------ecCCc--
Confidence 457999999999999999999999999999999 5556665431 01111
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEe---cC--CEEEE-cCEEEEeCeEEEcCCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIV---DP--HTVDV-DGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i---~~--~~v~v-~g~~~~~d~lviAtG~~p~~ 223 (551)
...+.+.+.++.....+ +..+..++.++.+.+..+ +. +++.. +++++.||+||||||++|+.
T Consensus 52 --~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 52 --ITRDGIKPEEFKEIGLN----------EVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp --TTCTTBCHHHHHHHHHH----------HHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred --cCCCCCCHHHHHHHHHH----------HHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcccc
Confidence 01122344443332211 112223567777655543 22 24444 77899999999999999999
Q ss_pred CCCCCCC-----ceecchhhhcCCCCCCeEEEEcCcH-HHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHH
Q 008841 224 PDIPGSE-----YAIDSDAALDLPSKPEKIAIVGGGY-IALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297 (551)
Q Consensus 224 p~i~g~~-----~~~~~~~~~~~~~~~~~vvViG~G~-~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~ 297 (551)
|++||.+ .+.++.........+++++|||+|. .++|+|..+++.+.+|+++.+.+.+ .+.+.+.|+
T Consensus 120 p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~--------~~~~~~~l~ 191 (304)
T 4fk1_A 120 PSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL--------SQTIMDELS 191 (304)
T ss_dssp CSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC--------CHHHHHHHH
T ss_pred ccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc--------hhhhhhhhh
Confidence 9999964 2444444333334467788888775 5689999999999999999886643 234567788
Q ss_pred hcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEE
Q 008841 298 LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIW 377 (551)
Q Consensus 298 ~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vy 377 (551)
+.|++++.+ .++.+..+++....|++.+|+++++|.+++++|..|+..+ +++.|++++++|+|.||+++|||+||||
T Consensus 192 ~~g~~~~~~-~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~--~~~~g~~~~~~G~I~vd~~~~Ts~p~Iy 268 (304)
T 4fk1_A 192 NKNIPVITE-SIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQF--IEQLGCELQSNGTFVIDDFGRTSEKNIY 268 (304)
T ss_dssp TTTCCEECS-CEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCH--HHHTTCCCCTTSSSCSSTTCBCSSTTEE
T ss_pred ccceeEeee-eEEEeecCCCeeeeeeccccceeeecceeeeeccccCChh--hhhcCeEECCCCCEEECcCCccCCCCEE
Confidence 999999987 5788876655545689999999999999888888777766 7888999999999999999999999999
Q ss_pred EeCcCCCC-CCChHHHHHhHHHHHHHHc
Q 008841 378 AVGDVTDR-INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 378 a~GD~~~~-~~~~~~A~~~g~~aa~~i~ 404 (551)
|+|||++. +.++..|+.||++||..|.
T Consensus 269 A~GDv~~~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 269 LAGETTTQGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp ECSHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999974 5678899999999998774
No 58
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.7e-36 Score=304.37 Aligned_cols=282 Identities=21% Similarity=0.286 Sum_probs=216.6
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+++||+|||||++|+++|..|++.|++|+||| +. +||.|.+.+... ..+
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~-~gg~~~~~~~~~---------------~~~----- 62 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIG----------ET-PGGQLTEAGIVD---------------DYL----- 62 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SS-TTGGGGGCCEEC---------------CST-----
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEe----------cc-CCCeeccccccc---------------ccC-----
Confidence 35899999999999999999999999999999 44 888886532211 000
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCC----EEEE-cCEEEEeCeEEEcCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPH----TVDV-DGKLYSARHILISVGGRPFIPD 225 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~----~v~v-~g~~~~~d~lviAtG~~p~~p~ 225 (551)
..+......+. ..+.+.+.+.+++++..++..++.. .+.+ ++..+.||+||+|||+.|..|+
T Consensus 63 --~~~~~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~ 129 (323)
T 3f8d_A 63 --GLIEIQASDMI-----------KVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLG 129 (323)
T ss_dssp --TSTTEEHHHHH-----------HHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCC
T ss_pred --CCCCCCHHHHH-----------HHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCC
Confidence 01111222222 2233445667888887776666533 3444 5578999999999999999999
Q ss_pred CCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcC
Q 008841 226 IPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRG 300 (551)
Q Consensus 226 i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~G 300 (551)
+||.+. +............+++++|+|+|.+++|+|..|.+.|.+|+++++.+.+++ +++ .+.+.+++.|
T Consensus 130 i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~---~~~~~~~~~g 204 (323)
T 3f8d_A 130 VPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA--QPI---YVETVKKKPN 204 (323)
T ss_dssp CTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS--CHH---HHHHHHTCTT
T ss_pred CCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc--CHH---HHHHHHhCCC
Confidence 998653 222222222223478999999999999999999999999999999988765 332 2333444569
Q ss_pred cEEEcCcccEEEEEcCCceEEEEECC---Ce--EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCc
Q 008841 301 IEFHTEESPQAILKSTDGSLSVKTNK---GT--VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPS 375 (551)
Q Consensus 301 v~i~~~~~v~~i~~~~~~~~~V~~~~---G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 375 (551)
|++++++.++++..++ +...|.+.+ |+ ++++|.||+|+|+.|+.++ ++..+++++++|+|.||++++|+.||
T Consensus 205 v~~~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~--~~~~g~~~~~~g~i~vd~~~~t~~~~ 281 (323)
T 3f8d_A 205 VEFVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDF--AKSNGIETDTNGYIKVDEWMRTSVPG 281 (323)
T ss_dssp EEEECSEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEECCCEECCHHH--HHHTTCCBCTTSSBCCCTTCBCSSTT
T ss_pred cEEEeCCEEEEEeccC-ceeEEEEEECCCCceEEEEcCEEEEEECCCCChhH--HhhcCeeecCCCcEecCCCceecCCC
Confidence 9999999999998764 334566654 65 7999999999999999877 67889999999999999999999999
Q ss_pred EEEeCcCCCC---CCChHHHHHhHHHHHHHHc
Q 008841 376 IWAVGDVTDR---INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 376 vya~GD~~~~---~~~~~~A~~~g~~aa~~i~ 404 (551)
|||+|||++. ++.+..|..||+++|.||.
T Consensus 282 vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 282 VFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp EEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred EEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 9999999995 7899999999999999986
No 59
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=5.1e-36 Score=300.86 Aligned_cols=286 Identities=21% Similarity=0.246 Sum_probs=219.4
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
+++||+|||||++|+++|..|++.|++|+||| +...||.|....... .++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~~~gg~~~~~~~~~---------------~~~~~--- 55 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLIT----------GMEKGGQLTTTTEVE---------------NWPGD--- 55 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEEC----------CSSTTGGGGGCSBCC---------------CSTTC---
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEc----------cCCCCceEecchhhh---------------hCCCC---
Confidence 35899999999999999999999999999999 556788765322110 11111
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--CEEE-E-cCEEEEeCeEEEcCCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--HTVD-V-DGKLYSARHILISVGGRPFIPDI 226 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~~v~-v-~g~~~~~d~lviAtG~~p~~p~i 226 (551)
...+....+..+ +...+.+.+++++.+++..++. ..+. . ++..+.||+||+|||++|..|++
T Consensus 56 ---~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~ 121 (320)
T 1trb_A 56 ---PNDLTGPLLMER-----------MHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGL 121 (320)
T ss_dssp ---CSSCBHHHHHHH-----------HHHHHHHTTCEEECCCEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCC
T ss_pred ---CCCCCHHHHHHH-----------HHHHHHHCCCEEEEeeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCC
Confidence 011222332222 2234556789998887777653 2222 3 67789999999999999998888
Q ss_pred CCCC-----ceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCc
Q 008841 227 PGSE-----YAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGI 301 (551)
Q Consensus 227 ~g~~-----~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv 301 (551)
||.+ .+.+..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++.+.+.+.+.+++.||
T Consensus 122 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv 199 (320)
T 1trb_A 122 PSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNI 199 (320)
T ss_dssp HHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSE
T ss_pred CChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCe
Confidence 8753 122222222222357899999999999999999999999999999988754 377788888899999999
Q ss_pred EEEcCcccEEEEEcCCceEEEEECC----C--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCC-----C
Q 008841 302 EFHTEESPQAILKSTDGSLSVKTNK----G--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYS-----G 370 (551)
Q Consensus 302 ~i~~~~~v~~i~~~~~~~~~V~~~~----G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~-----~ 370 (551)
+++++++|+++..++++...|.+.+ | +++++|.||+|+|++|+++++ + .+++++ +|+|.||+++ +
T Consensus 200 ~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~--~-~~l~~~-~G~i~vd~~~~~~~~~ 275 (320)
T 1trb_A 200 ILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF--E-GQLELE-NGYIKVQSGIHGNATQ 275 (320)
T ss_dssp EEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGG--T-TTSCEE-TTEECCCCSSSSCTTB
T ss_pred EEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHh--c-cccccc-CceEEECCCccccccc
Confidence 9999999999988765544466644 4 579999999999999999874 3 467778 8999999997 7
Q ss_pred CCCCcEEEeCcCCCC-CCChHHHHHhHHHHHHHHc
Q 008841 371 TAVPSIWAVGDVTDR-INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 371 t~~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 404 (551)
|+.|+|||+|||+.. +..+..|..||+.||.+|.
T Consensus 276 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 276 TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp CSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEcccccCCcchhhhhhhccHHHHHHHHH
Confidence 999999999999997 4788999999999999985
No 60
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=9.8e-36 Score=297.48 Aligned_cols=280 Identities=19% Similarity=0.316 Sum_probs=213.3
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||+|||||++|+++|..|++.|++|+||| + ..||.|.....++. +.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~----------~-~~gG~~~~~~~~~~---------------~~------ 48 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMG----------E-RFGGQILDTVDIEN---------------YI------ 48 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEC----------S-STTGGGGGCCEECC---------------BT------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEe----------C-CCCceecccccccc---------------cc------
Confidence 3899999999999999999999999999998 3 36788764322220 00
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC-------CEEEE-cCEEEEeCeEEEcCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP-------HTVDV-DGKLYSARHILISVGGRPF 222 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~-------~~v~v-~g~~~~~d~lviAtG~~p~ 222 (551)
..+..+...+ ...+...+.+.+++++.+ ++..++. ..+.+ +++.+.||++|+|||++|.
T Consensus 49 -~~~~~~~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 49 -SVPKTEGQKL-----------AGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp -TBSSEEHHHH-----------HHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred -CcCCCCHHHH-----------HHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 0011122222 222334556779999988 7777743 24455 5668999999999999999
Q ss_pred CCCCCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHH
Q 008841 223 IPDIPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297 (551)
Q Consensus 223 ~p~i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~ 297 (551)
.|++||.+. ++.+.........+++++|||+|++|+|+|..|++.+.+|+++++.+.+. +++ .+.+.++
T Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~----~~~~~l~ 190 (310)
T 1fl2_A 117 NMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--ADQ----VLQDKLR 190 (310)
T ss_dssp CCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--SCH----HHHHHHH
T ss_pred CCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--ccH----HHHHHHh
Confidence 888998642 33333322222347899999999999999999999999999999988763 343 3455666
Q ss_pred h-cCcEEEcCcccEEEEEcCCceEEEEEC---CCe--EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCC
Q 008841 298 L-RGIEFHTEESPQAILKSTDGSLSVKTN---KGT--VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGT 371 (551)
Q Consensus 298 ~-~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t 371 (551)
+ .||+++++++++++..+++....|.+. +|+ ++++|.||+|+|+.|+++++ +. .++++++|+|.||+++||
T Consensus 191 ~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~-~l~~~~~g~i~vd~~~~t 267 (310)
T 1fl2_A 191 SLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWL--EG-AVERNRMGEIIIDAKCET 267 (310)
T ss_dssp TCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--TT-TSCBCTTSCBCCCTTCBC
T ss_pred hCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHH--hc-cccccCCCcEEcCCCCcc
Confidence 6 699999999999998765553345554 353 68999999999999999874 44 377888899999999999
Q ss_pred CCCcEEEeCcCCCCC-CChHHHHHhHHHHHHHHc
Q 008841 372 AVPSIWAVGDVTDRI-NLTPVALMEGGALAKTLF 404 (551)
Q Consensus 372 ~~~~vya~GD~~~~~-~~~~~A~~~g~~aa~~i~ 404 (551)
+.|+|||+|||+..+ +.+..|+.||+.+|.||.
T Consensus 268 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 301 (310)
T 1fl2_A 268 NVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 301 (310)
T ss_dssp SSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCcchhhhhhHhhHHHHHHHHH
Confidence 999999999999975 678899999999999986
No 61
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6.6e-36 Score=302.13 Aligned_cols=288 Identities=18% Similarity=0.225 Sum_probs=215.7
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.++||+|||||++|+++|..|++.|++|+|||+ ...+||.|.+. .|++.+ +.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~---------~~~~gg~~~~~--~~~~~~-----------------~~ 55 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDP---------LPEPGGQLTAL--YPEKYI-----------------YD 55 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSCHHHHHT--CTTSEE-----------------CC
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCeeecc--CCCcee-----------------ec
Confidence 358999999999999999999999999999993 45678887532 222110 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC--CE--EEE-cCEEEEeCeEEEcCCC---CC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP--HT--VDV-DGKLYSARHILISVGG---RP 221 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~--~~--v~v-~g~~~~~d~lviAtG~---~p 221 (551)
....+.+.+..+.. .+.+.+.+.+++++.+ .+..++. .. +.+ ++..+.||+||+|||+ .|
T Consensus 56 ~~~~~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p 124 (335)
T 2zbw_A 56 VAGFPKVYAKDLVK-----------GLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEP 124 (335)
T ss_dssp STTCSSEEHHHHHH-----------HHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEE
T ss_pred cCCCCCCCHHHHHH-----------HHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCC
Confidence 01112222333222 2223344557877655 4544432 23 333 5668999999999998 57
Q ss_pred CCCCCCCCCce-----ec-chhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHH
Q 008841 222 FIPDIPGSEYA-----ID-SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQ 295 (551)
Q Consensus 222 ~~p~i~g~~~~-----~~-~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 295 (551)
..|+++|.+.. +. ..+... ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .++..+.+.+.
T Consensus 125 ~~~~i~g~~~~~~~~~~~~~~~~~~--~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--~~~~~~~l~~~ 200 (335)
T 2zbw_A 125 RRIGAPGEREFEGRGVYYAVKSKAE--FQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--HEASVKELMKA 200 (335)
T ss_dssp CCCCCTTTTTTBTTTEESSCSCGGG--GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--CHHHHHHHHHH
T ss_pred CCCCCCChhhccCcEEEEecCchhh--cCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--cHHHHHHHHhc
Confidence 77788886432 11 111111 1478999999999999999999999999999999987655 46677888889
Q ss_pred HHhcCcEEEcCcccEEEEEcCCceEEEEEC---CC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCC
Q 008841 296 MSLRGIEFHTEESPQAILKSTDGSLSVKTN---KG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG 370 (551)
Q Consensus 296 l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~ 370 (551)
+++.||++++++.|++++.+ ++...|.+. +| +++++|.||+|+|++|+.++ ++..+++++ +|+|.||+++|
T Consensus 201 l~~~gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~~~~ 276 (335)
T 2zbw_A 201 HEEGRLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGP--LANWGLALE-KNKIKVDTTMA 276 (335)
T ss_dssp HHTTSSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGG--GGGSCCCEE-TTEEECCTTCB
T ss_pred cccCCeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEEeecCCCCchH--hhhcceecc-CCeeeeCCCCC
Confidence 99999999999999999884 332356654 67 57999999999999999887 677888877 68999999999
Q ss_pred CCCCcEEEeCcCCCC---CCChHHHHHhHHHHHHHHcC
Q 008841 371 TAVPSIWAVGDVTDR---INLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 371 t~~~~vya~GD~~~~---~~~~~~A~~~g~~aa~~i~g 405 (551)
|+.|+|||+|||+.. ++++..|..||+++|+||.+
T Consensus 277 t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 277 TSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp CSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 999999999999963 57899999999999999874
No 62
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.4e-36 Score=296.63 Aligned_cols=273 Identities=17% Similarity=0.239 Sum_probs=209.5
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
++||+|||||++|+++|..|++.|++|+|||+ ....+.+... ...+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~----------~~~~~~~~~~------------------------~~~~ 47 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDA----------GERRNRFASH------------------------SHGF 47 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC----------CCCGGGGCSC------------------------CCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeC----------CCcccccchh------------------------hcCC
Confidence 48999999999999999999999999999992 2222211100 0000
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEeEEEEecCC----EEEE-cCEEEEeCeEEEcCCCCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINA-GITLIEGRGKIVDPH----TVDV-DGKLYSARHILISVGGRPFIPD 225 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~i~~~----~v~v-~g~~~~~d~lviAtG~~p~~p~ 225 (551)
......+...+..+. .+.+.+. +++++.+++..++.. .+.+ +++.+.||+||+|||+.|..|+
T Consensus 48 ~~~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~ 116 (297)
T 3fbs_A 48 LGQDGKAPGEIIAEA-----------RRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPE 116 (297)
T ss_dssp TTCTTCCHHHHHHHH-----------HHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCC
T ss_pred cCCCCCCHHHHHHHH-----------HHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCC
Confidence 111223333333322 2334444 789988887776532 4555 6778999999999999999999
Q ss_pred CCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcC
Q 008841 226 IPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRG 300 (551)
Q Consensus 226 i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~G 300 (551)
+||.+. +++..........+++++|||+|.+|+|+|..|.+.| +|+++.+.+. .+.+.+.+.+++.|
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~-------~~~~~~~~~l~~~g 188 (297)
T 3fbs_A 117 IAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV-------EPDADQHALLAARG 188 (297)
T ss_dssp CBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC-------CCCHHHHHHHHHTT
T ss_pred CCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC-------CCCHHHHHHHHHCC
Confidence 999753 2333222222234789999999999999999999999 9999998765 22345677889999
Q ss_pred cEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeec--CCC-CeEeCCCCCCCCCcEE
Q 008841 301 IEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMT--KNG-AIEVDEYSGTAVPSIW 377 (551)
Q Consensus 301 v~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~--~~G-~i~vd~~~~t~~~~vy 377 (551)
|+++. ++|+++..++ .|.+.+|+++++|.|++|+|+.|+.++ ++..+++++ ++| ++.||++++|+.|+||
T Consensus 189 v~i~~-~~v~~i~~~~----~v~~~~g~~~~~D~vi~a~G~~p~~~~--~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vy 261 (297)
T 3fbs_A 189 VRVET-TRIREIAGHA----DVVLADGRSIALAGLFTQPKLRITVDW--IEKLGCAVEEGPMGSTIVTDPMKQTTARGIF 261 (297)
T ss_dssp CEEEC-SCEEEEETTE----EEEETTSCEEEESEEEECCEEECCCSC--HHHHTCCEEEETTEEEECCCTTCBCSSTTEE
T ss_pred cEEEc-ceeeeeecCC----eEEeCCCCEEEEEEEEEccCcccCchh--HHhcCCccccCCCCceEEeCCCCccCCCCEE
Confidence 99996 8999997532 588899999999999999999999987 677788776 457 8999999999999999
Q ss_pred EeCcCCCCCCChHHHHHhHHHHHHHHc
Q 008841 378 AVGDVTDRINLTPVALMEGGALAKTLF 404 (551)
Q Consensus 378 a~GD~~~~~~~~~~A~~~g~~aa~~i~ 404 (551)
|+|||++.++.+..|..||++||.||.
T Consensus 262 a~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 262 ACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp ECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 999999989999999999999999985
No 63
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-35 Score=298.94 Aligned_cols=285 Identities=21% Similarity=0.283 Sum_probs=212.5
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
+..++||+|||||++|+++|..|++.|++|+||| +...||.|...... ..++.+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~~~gg~~~~~~~~---------------~~~~~~~ 65 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFE----------GTSFGGALMTTTDV---------------ENYPGFR 65 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEC----------CSSCSCGGGSCSCB---------------CCSTTCT
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEe----------cCCCCCceeccchh---------------hhcCCCC
Confidence 3456899999999999999999999999999999 45678887542211 0111111
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC---CEE-EE-cCEEEEeCeEEEcCCCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP---HTV-DV-DGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~---~~v-~v-~g~~~~~d~lviAtG~~p~~ 223 (551)
..+....+..+ +.+.+.+.+++++.+++..++. ..+ .+ +++.+.||+||+|||+.|..
T Consensus 66 ------~~~~~~~~~~~-----------l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 66 ------NGITGPELMDE-----------MREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp ------TCBCHHHHHHH-----------HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred ------CCCCHHHHHHH-----------HHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 11223332222 2234456689998887666654 456 55 56789999999999999999
Q ss_pred CCCCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHh
Q 008841 224 PDIPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSL 298 (551)
Q Consensus 224 p~i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 298 (551)
|++||.+. +++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..+.+++
T Consensus 129 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--~~~~---~~~~~~~ 203 (335)
T 2a87_A 129 LQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--SKIM---LDRARNN 203 (335)
T ss_dssp CCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--CTTH---HHHHHHC
T ss_pred CCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--cHHH---HHHHhcc
Confidence 98888532 332222222223578999999999999999999999999999999887643 2222 1244567
Q ss_pred cCcEEEcCcccEEEEEcCCceEEEEEC---CC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCC-CCCC
Q 008841 299 RGIEFHTEESPQAILKSTDGSLSVKTN---KG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY-SGTA 372 (551)
Q Consensus 299 ~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~t~ 372 (551)
.||+++++++|++++.+++. ..|.+. +| +++++|.||+|+|++|+++++ + .+++++++|+|.||++ ++|+
T Consensus 204 ~gV~v~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~t~ 279 (335)
T 2a87_A 204 DKIRFLTNHTVVAVDGDTTV-TGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLV--R-EAIDVDPDGYVLVQGRTTSTS 279 (335)
T ss_dssp TTEEEECSEEEEEEECSSSC-CEEEEEEETTSCCEEECCSCEEECSCEEECCTTT--B-TTBCBCTTSCBCCSTTSSBCS
T ss_pred CCcEEEeCceeEEEecCCcE-eEEEEEEcCCCceEEeecCEEEEccCCccChhHh--h-cccccCCCccEEeCCCCCccC
Confidence 89999999999999876532 234443 45 579999999999999999874 3 5788888899999996 6899
Q ss_pred CCcEEEeCcCCCC-CCChHHHHHhHHHHHHHHc
Q 008841 373 VPSIWAVGDVTDR-INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 373 ~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 404 (551)
.|+|||+|||++. ++.+..|..||+++|.||.
T Consensus 280 ~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 280 LPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp STTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 9999999999986 5788999999999999985
No 64
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.6e-35 Score=302.39 Aligned_cols=291 Identities=19% Similarity=0.203 Sum_probs=215.6
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
|+.++||+|||||++|+++|..|++.|++|+|||+ ...+||.|.+. .|.+.+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~---------~~~~gg~~~~~--~~~~~~----------------- 62 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIES---------MPQLGGQLAAL--YPEKHI----------------- 62 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCHHHHHT--CTTSEE-----------------
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEec---------CCCCCCccccc--CCCccc-----------------
Confidence 44568999999999999999999999999999993 45678877532 221100
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC-----CEEEE-cCEEEEeCeEEEcCCC--
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP-----HTVDV-DGKLYSARHILISVGG-- 219 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~-----~~v~v-~g~~~~~d~lviAtG~-- 219 (551)
+.....+.++...+.. .+.+.+.+.+++++.+ .+..++. ..+.+ +++.+.||+||+|||+
T Consensus 63 ~~~~~~~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 63 YDVAGFPEVPAIDLVE-----------SLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp CCSTTCSSEEHHHHHH-----------HHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred ccCCCCCCCCHHHHHH-----------HHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 0001111222233222 2233455667887655 4554432 13444 5668999999999998
Q ss_pred -CCCCCCCCC-CCc-----eec-chhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHH
Q 008841 220 -RPFIPDIPG-SEY-----AID-SDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDF 291 (551)
Q Consensus 220 -~p~~p~i~g-~~~-----~~~-~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 291 (551)
.|..|+++| .+. ++. ..+... ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+ .++..+.
T Consensus 132 ~~~~~~~i~g~~~~~~~~~v~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~~~~~~~ 207 (360)
T 3ab1_A 132 FEPRKLPQLGNIDHLTGSSVYYAVKSVED--FKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG--HGKTAHE 207 (360)
T ss_dssp CCBCCCGGGCCCTTTBTTTEESSCSCGGG--GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS--CSHHHHS
T ss_pred CCCCCCCCCCchhhCcCceEEEecCCHHH--cCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC--CHHHHHH
Confidence 566667787 432 111 111111 1378999999999999999999999999999999887655 2456777
Q ss_pred HHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE--CCC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCC
Q 008841 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT--NKG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDE 367 (551)
Q Consensus 292 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~--~~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~ 367 (551)
+.+.+++.||+++++++|+++..++++...|.+ .+| +++++|.||+|+|+.|+.++ ++..+++++ +|+|.||+
T Consensus 208 l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~ 284 (360)
T 3ab1_A 208 VERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGP--LARWDLELY-ENALVVDS 284 (360)
T ss_dssp SHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGG--GGGSSCCEE-TTEEECCT
T ss_pred HHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHH--HHhhccccc-cCeeeecC
Confidence 888889999999999999999887554334555 477 57999999999999999987 667788877 68999999
Q ss_pred CCCCCCCcEEEeCcCCC---CCCChHHHHHhHHHHHHHHcC
Q 008841 368 YSGTAVPSIWAVGDVTD---RINLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 368 ~~~t~~~~vya~GD~~~---~~~~~~~A~~~g~~aa~~i~g 405 (551)
++||++|+|||+|||+. .++++..|..||+++|.||.+
T Consensus 285 ~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 285 HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHh
Confidence 99999999999999996 357899999999999999874
No 65
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2.5e-35 Score=297.95 Aligned_cols=290 Identities=20% Similarity=0.202 Sum_probs=216.2
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
+.+++||+|||||++|+++|..|++.|++|+|||+. .......||.|.....+. .++.+.
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~-----~~~~~~~gg~~~~~~~~~---------------~~~~~~ 78 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGM-----MANGIAAGGQLTTTTEIE---------------NFPGFP 78 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-----SBTTBCTTCGGGGSSEEC---------------CSTTCT
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC-----CCCCCCcCcccccchhhc---------------ccCCCc
Confidence 445799999999999999999999999999999931 011235777765422110 011110
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--CEEEE------cCEEEEeCeEEEcCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--HTVDV------DGKLYSARHILISVGGR 220 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~~v~v------~g~~~~~d~lviAtG~~ 220 (551)
....... +...+...+.+.+++++.+++..++. ..+.+ ++..+.||+||+|||+.
T Consensus 79 ------~~~~~~~-----------~~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 79 ------DGLTGSE-----------LMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp ------TCEEHHH-----------HHHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEE
T ss_pred ------ccCCHHH-----------HHHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCC
Confidence 0111122 22233345566799998887666653 23333 45789999999999999
Q ss_pred CCCCCCCCCCc-----eecchhhhcC--CCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHH
Q 008841 221 PFIPDIPGSEY-----AIDSDAALDL--PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVA 293 (551)
Q Consensus 221 p~~p~i~g~~~-----~~~~~~~~~~--~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~ 293 (551)
|..|++||.+. +......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .+.+.
T Consensus 142 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~~~~~ 215 (338)
T 3itj_A 142 AKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------STIMQ 215 (338)
T ss_dssp ECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------CHHHH
T ss_pred cCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------CHHHH
Confidence 99999998542 3333222222 23478999999999999999999999999999999887654 34455
Q ss_pred HHHHhc-CcEEEcCcccEEEEEcCCceEEEEECC-----CeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEe-C
Q 008841 294 EQMSLR-GIEFHTEESPQAILKSTDGSLSVKTNK-----GTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEV-D 366 (551)
Q Consensus 294 ~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~V~~~~-----G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~v-d 366 (551)
+.+.+. ||++++++.|++++.++++...|.+.+ ++++++|.||+|+|+.|+..+ ++. +++++++|++.| |
T Consensus 216 ~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--~~~-~l~~~~~G~i~v~~ 292 (338)
T 3itj_A 216 KRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKI--VAG-QVDTDEAGYIKTVP 292 (338)
T ss_dssp HHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGG--GBT-TBCBCTTSCBCCCT
T ss_pred HHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhH--hhC-ceEecCCCcEEEcC
Confidence 556555 999999999999998776544566655 457999999999999999987 344 899999999995 8
Q ss_pred CCCCCCCCcEEEeCcCCCC-CCChHHHHHhHHHHHHHHc
Q 008841 367 EYSGTAVPSIWAVGDVTDR-INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 367 ~~~~t~~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 404 (551)
++++|+.|+|||+|||+.. ++.+..|+.||+.||.||.
T Consensus 293 ~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 293 GSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp TSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 8999999999999999985 6888999999999999986
No 66
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2e-35 Score=297.83 Aligned_cols=284 Identities=18% Similarity=0.260 Sum_probs=211.9
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
++||+|||||+||+++|..|++.|++|+|||+ ...+||.|.+ +.|...+ +..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~---------~~~~gG~~~~--~~~~~~~-----------------~~~ 58 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIES---------LPQLGGQLSA--LYPEKYI-----------------YDV 58 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCHHHHH--HCTTSEE-----------------CCS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEc---------CCCCCceehh--cCCCceE-----------------ecc
Confidence 58999999999999999999999999999993 4567887742 1221100 001
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC--C---EEEEcCEEEEeCeEEEcCCC---CCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP--H---TVDVDGKLYSARHILISVGG---RPF 222 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~--~---~v~v~g~~~~~d~lviAtG~---~p~ 222 (551)
.+.+......+ ...+...+.+.+++++.+ ++..++. . .+.++...+.||+||+|||+ .|.
T Consensus 59 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 59 AGFPKIRAQEL-----------INNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp TTCSSEEHHHH-----------HHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEEEEEEEEEECCTTSCCEEC
T ss_pred CCCCCCCHHHH-----------HHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCEEEeCEEEECCCCCcCCCC
Confidence 11111222222 222334455668888753 4555432 2 45554445999999999999 888
Q ss_pred CCCCCCCCce----ecchhhhcCCC-CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHH
Q 008841 223 IPDIPGSEYA----IDSDAALDLPS-KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMS 297 (551)
Q Consensus 223 ~p~i~g~~~~----~~~~~~~~~~~-~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~ 297 (551)
.|++||.+.+ ... ...+... .+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.+ .+. ..+.|+
T Consensus 128 ~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-~~~-----~~~~l~ 200 (332)
T 3lzw_A 128 KLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-HEH-----SVENLH 200 (332)
T ss_dssp CCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-CHH-----HHHHHH
T ss_pred CCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-cHH-----HHHHHh
Confidence 8889987531 111 2222222 378999999999999999999999999999999887643 222 234578
Q ss_pred hcCcEEEcCcccEEEEEcCCceEEEEECC-----CeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCC
Q 008841 298 LRGIEFHTEESPQAILKSTDGSLSVKTNK-----GTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTA 372 (551)
Q Consensus 298 ~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~-----G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~ 372 (551)
+.||+++.++.++++..+++. ..|.+.+ ++++++|.||+|+|+.|+.++ ++..++++ ++|+|.||+++||+
T Consensus 201 ~~gv~~~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~--~~~~~~~~-~~g~i~vd~~~~t~ 276 (332)
T 3lzw_A 201 ASKVNVLTPFVPAELIGEDKI-EQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGP--IKNWGLDI-EKNSIVVKSTMETN 276 (332)
T ss_dssp HSSCEEETTEEEEEEECSSSC-CEEEEEETTSCCEEEEECSEEEECCCEECCCGG--GGGSSCCE-ETTEEECCTTSBCS
T ss_pred cCCeEEEeCceeeEEecCCce-EEEEEEecCCCceEEEECCEEEEeeccCCCchH--HhhcCccc-cCCeEEeCCCCcee
Confidence 899999999999999876553 5566654 457999999999999999987 77888888 67899999999999
Q ss_pred CCcEEEeCcCC---CCCCChHHHHHhHHHHHHHHcC
Q 008841 373 VPSIWAVGDVT---DRINLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 373 ~~~vya~GD~~---~~~~~~~~A~~~g~~aa~~i~g 405 (551)
.|+|||+|||+ +.++++..|..||+++|.||..
T Consensus 277 ~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 277 IEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp STTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 99999999999 4578899999999999999863
No 67
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=4.3e-36 Score=318.36 Aligned_cols=288 Identities=19% Similarity=0.289 Sum_probs=210.5
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEcc-CCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICEL-PFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~-~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
.+.+|||||||+||+++|..|++.+++|+|||+ +|+.+++......+|+
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~------------------------------ 90 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGT------------------------------ 90 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTS------------------------------
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhcc------------------------------
Confidence 356899999999999999999999999999993 1111111111111111
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--CEEEE---------------------cCE
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--HTVDV---------------------DGK 206 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~~v~v---------------------~g~ 206 (551)
++..++....... ....+.+++++.+++..+|. +++.+ ++.
T Consensus 91 -------l~~~~i~~p~~~~---------~~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (502)
T 4g6h_A 91 -------VDEKSIIEPIVNF---------ALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPA 154 (502)
T ss_dssp -------SCGGGGEEEHHHH---------HTTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCE
T ss_pred -------ccHHHhhhhHHHH---------HHhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCce
Confidence 1111100000000 00123479999999888864 45554 256
Q ss_pred EEEeCeEEEcCCCCCCCCCCCCCC-ce---ecchhhhcC--------------CC------CCCeEEEEcCcHHHHHHHH
Q 008841 207 LYSARHILISVGGRPFIPDIPGSE-YA---IDSDAALDL--------------PS------KPEKIAIVGGGYIALEFAG 262 (551)
Q Consensus 207 ~~~~d~lviAtG~~p~~p~i~g~~-~~---~~~~~~~~~--------------~~------~~~~vvViG~G~~g~e~a~ 262 (551)
++.||+||||||++|+.+++||.+ +. .+.++...+ .. ...+++|||+|++|+|+|.
T Consensus 155 ~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~ 234 (502)
T 4g6h_A 155 EIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAG 234 (502)
T ss_dssp EEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHH
T ss_pred EEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHH
Confidence 899999999999999999999963 22 233332211 10 1247999999999999999
Q ss_pred HHHhC--------------CCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCe
Q 008841 263 IFSGL--------------TSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGT 328 (551)
Q Consensus 263 ~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~ 328 (551)
.|.++ ..+|+++++.+++++.+++++++.+++.|+++||++++++.|++++.+.. ...+...||+
T Consensus 235 ~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~-~~~~~~~dg~ 313 (502)
T 4g6h_A 235 ELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQL-LAKTKHEDGK 313 (502)
T ss_dssp HHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSSEE-EEEEECTTSC
T ss_pred HHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeCCce-EEEEEecCcc
Confidence 88764 36899999999999999999999999999999999999999999964321 2334556663
Q ss_pred ----EEEeeEEEEecCcCCCCCCCC-ccccCeeecCCCCeEeCCCCCC-CCCcEEEeCcCCCC--CCChHHHHHhHHHHH
Q 008841 329 ----VDGFSHVMFATGRRPNTKNLG-LEKVGVKMTKNGAIEVDEYSGT-AVPSIWAVGDVTDR--INLTPVALMEGGALA 400 (551)
Q Consensus 329 ----~i~~d~vi~a~G~~p~~~~l~-l~~~gl~~~~~G~i~vd~~~~t-~~~~vya~GD~~~~--~~~~~~A~~~g~~aa 400 (551)
++++|.||||+|..|+...-+ ....+...+.+|+|.||++||+ ++|||||+|||+.. +++++.|.+||+++|
T Consensus 314 ~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A 393 (502)
T 4g6h_A 314 ITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLA 393 (502)
T ss_dssp EEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHH
T ss_pred cceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHH
Confidence 699999999999999842100 2445666778899999999998 89999999999875 689999999999999
Q ss_pred HHHcC
Q 008841 401 KTLFQ 405 (551)
Q Consensus 401 ~~i~g 405 (551)
+||..
T Consensus 394 ~ni~~ 398 (502)
T 4g6h_A 394 KNFDK 398 (502)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99853
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.9e-34 Score=291.20 Aligned_cols=288 Identities=21% Similarity=0.207 Sum_probs=210.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
++||+|||||++|+++|..|++.|++|+|||+. .......||.|.....+ ...+.+.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~-----~~~~~~~gg~~~~~~~~---------------~~~~~~~--- 64 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGW-----MANDIAPGGQLTTTTDV---------------ENFPGFP--- 64 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-----SBTTBCTTCGGGGCSEE---------------CCSTTCT---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEecc-----CccccCCCceeeecccc---------------ccCCCCc---
Confidence 589999999999999999999999999999920 00014566665432110 0111110
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--C--EEEEcCEEEEeCeEEEcCCCCCCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--H--TVDVDGKLYSARHILISVGGRPFIPDIP 227 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~--~v~v~g~~~~~d~lviAtG~~p~~p~i~ 227 (551)
..++...+. ..+.+.+.+.+++++.+++..++. . .+.+++..+.||+||+|||+.|..|++|
T Consensus 65 ---~~~~~~~~~-----------~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~vv~A~G~~~~~~~~~ 130 (333)
T 1vdc_A 65 ---EGILGVELT-----------DKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKRLSFV 130 (333)
T ss_dssp ---TCEEHHHHH-----------HHHHHHHHHTTCEEECCCCCEEECSSSSEEEECSSEEEEEEEEEECCCEEECCCCCB
T ss_pred ---cCCCHHHHH-----------HHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEECCcEEEcCEEEECCCCCcCCCCCC
Confidence 011222222 222334556789998877666543 2 4444778999999999999999998888
Q ss_pred CCCc---------eecchhhhcCC--CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHH
Q 008841 228 GSEY---------AIDSDAALDLP--SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQM 296 (551)
Q Consensus 228 g~~~---------~~~~~~~~~~~--~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l 296 (551)
|.+. +.+........ ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..+.+
T Consensus 131 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~~~~---~~~~~ 205 (333)
T 1vdc_A 131 GSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--SKIM---QQRAL 205 (333)
T ss_dssp TCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHHH---HHHHH
T ss_pred CccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--cHHH---HHHHH
Confidence 8643 12222222222 4578999999999999999999999999999999887532 2222 23456
Q ss_pred HhcCcEEEcCcccEEEEEcCC--ceEEEEEC---CC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCC-
Q 008841 297 SLRGIEFHTEESPQAILKSTD--GSLSVKTN---KG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY- 368 (551)
Q Consensus 297 ~~~Gv~i~~~~~v~~i~~~~~--~~~~V~~~---~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~- 368 (551)
++.||+++++++|+++..+++ +...|.+. +| +++++|.||+|+|++|+.+++ + .+++++++|+|.||++
T Consensus 206 ~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~ 282 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL--D-GGVELDSDGYVVTKPGT 282 (333)
T ss_dssp TCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--T-TSSCBCTTSCBCCCTTS
T ss_pred hCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHh--h-ccccccCCCCEEechhh
Confidence 788999999999999988764 42335553 45 579999999999999999874 3 4788888899999997
Q ss_pred CCCCCCcEEEeCcCCCC-CCChHHHHHhHHHHHHHHc
Q 008841 369 SGTAVPSIWAVGDVTDR-INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 369 ~~t~~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 404 (551)
++|+.|+|||+|||+.. ++.+..|..||+.||.+|.
T Consensus 283 ~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 319 (333)
T 1vdc_A 283 TQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAE 319 (333)
T ss_dssp CBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHH
Confidence 58999999999999986 4788999999999999986
No 69
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=6.4e-34 Score=303.85 Aligned_cols=281 Identities=19% Similarity=0.324 Sum_probs=215.2
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
..+||+|||||+||+++|.+|++.|++|+||| . ..||.|.....++. +.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie----------~-~~GG~~~~~~~~~~---------------~~----- 259 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMG----------E-RFGGQVLDTVDIEN---------------YI----- 259 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----------S-STTGGGTTCSCBCC---------------BT-----
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEE----------C-CCCCcccccccccc---------------cC-----
Confidence 46899999999999999999999999999999 3 36888764332220 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC-------CEEEE-cCEEEEeCeEEEcCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP-------HTVDV-DGKLYSARHILISVGGRP 221 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~-------~~v~v-~g~~~~~d~lviAtG~~p 221 (551)
..+......+. ..+...+.+.+++++.+ ++..++. +.+.+ ++..+.||++|+|||++|
T Consensus 260 --~~~~~~~~~l~-----------~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 260 --SVPKTEGQKLA-----------GALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp --TBSSBCHHHHH-----------HHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred --CCCCCCHHHHH-----------HHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 01112222222 22334456779999988 6777753 34555 677899999999999999
Q ss_pred CCCCCCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHH
Q 008841 222 FIPDIPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQM 296 (551)
Q Consensus 222 ~~p~i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l 296 (551)
..|++||.+. +..+.........+++|+|||+|++|+|+|..|++.|.+|+++++.+.+.. + ..+.+.+
T Consensus 327 ~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--~----~~l~~~l 400 (521)
T 1hyu_A 327 RNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--D----QVLQDKV 400 (521)
T ss_dssp CCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--C----HHHHHHH
T ss_pred CCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--C----HHHHHHH
Confidence 9888998642 222222111112478999999999999999999999999999999887653 3 3456667
Q ss_pred Hh-cCcEEEcCcccEEEEEcCCceEEEEEC---CCe--EEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCC
Q 008841 297 SL-RGIEFHTEESPQAILKSTDGSLSVKTN---KGT--VDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSG 370 (551)
Q Consensus 297 ~~-~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~ 370 (551)
++ .||++++++.++++..++++...+.+. +|+ ++++|.|++|+|+.|+++++ +. .++++++|+|.||+++|
T Consensus 401 ~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l--~~-~l~~~~~G~I~Vd~~~~ 477 (521)
T 1hyu_A 401 RSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWL--EG-ALERNRMGEIIIDAKCE 477 (521)
T ss_dssp TTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGG--TT-TSCBCTTSCBCCCTTCB
T ss_pred hcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHH--hh-hhccCCCCcEEeCCCCC
Confidence 77 699999999999998865553356554 353 68999999999999999874 44 47788899999999999
Q ss_pred CCCCcEEEeCcCCCCC-CChHHHHHhHHHHHHHHc
Q 008841 371 TAVPSIWAVGDVTDRI-NLTPVALMEGGALAKTLF 404 (551)
Q Consensus 371 t~~~~vya~GD~~~~~-~~~~~A~~~g~~aa~~i~ 404 (551)
|++|+|||+|||+..+ +.+..|+.||+.||.+++
T Consensus 478 ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 478 TSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp CSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeecccCCCcceeeehHHhHHHHHHHHH
Confidence 9999999999999964 788999999999999986
No 70
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=8.5e-34 Score=290.52 Aligned_cols=311 Identities=18% Similarity=0.213 Sum_probs=211.6
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA-SVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
++||+|||||++|+++|..|++.|. +|+||| +..+||.|.++... ..+....+ ....+++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie----------~~~~Gg~~~~~~~~---~~~~~~~~-----~~~~~g~~ 65 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILE----------KGTVGHSFKHWPKS---TRTITPSF-----TSNGFGMP 65 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEC----------SSSTTHHHHTSCTT---CBCSSCCC-----CCGGGTCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEe----------cCCCCCccccCccc---ccccCcch-----hcccCCch
Confidence 5899999999999999999999999 999999 33388888654221 00000000 00111110
Q ss_pred cCCCCCCChHHHHHHHHH--HHHHHHHHHHHHHHhCCeEEEEeE-EEEecC----CEEEEcCEEEEeCeEEEcCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNA--ELQRLTGIYKNILINAGITLIEGR-GKIVDP----HTVDVDGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~-~~~i~~----~~v~v~g~~~~~d~lviAtG~~p~~ 223 (551)
.......++...+..... ....+...+...+++.+++++.+. +..++. ..+..++..+.||+||+|||+.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~- 144 (369)
T 3d1c_A 66 DMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDYNF- 144 (369)
T ss_dssp CTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCSTTS-
T ss_pred hhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCCCc-
Confidence 000011111111100000 001122333445566789988763 554542 244444446899999999998765
Q ss_pred CCCCCCCceecchhhhcCCC-CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-------CCHHHHHHHHHH
Q 008841 224 PDIPGSEYAIDSDAALDLPS-KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-------FDEDIRDFVAEQ 295 (551)
Q Consensus 224 p~i~g~~~~~~~~~~~~~~~-~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-------~~~~~~~~l~~~ 295 (551)
|.+|+ ...++..++..... ..++|+|||+|.+|+|+|..|.+.|.+|+++++.+.+++. +++...+.+.+.
T Consensus 145 p~ip~-~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~ 223 (369)
T 3d1c_A 145 PKKPF-KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNV 223 (369)
T ss_dssp BCCCS-SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHH
T ss_pred cCCCC-CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHH
Confidence 56666 44455544444333 3569999999999999999999999999999998877632 456777889999
Q ss_pred HHhcC-cEEEcCcccEEEEEcCCceEEEEECCCeEEE-eeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCC-CCCC
Q 008841 296 MSLRG-IEFHTEESPQAILKSTDGSLSVKTNKGTVDG-FSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY-SGTA 372 (551)
Q Consensus 296 l~~~G-v~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~-~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~t~ 372 (551)
+++.| |+++.++.|.+++.++++ +.|.+.+|+++. +|.||+|+|+.|+.++ +.+.+++ +++|++.||++ ++|+
T Consensus 224 l~~~g~v~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~d~vi~a~G~~~~~~~--~~~~~~~-~~~g~i~v~~~~~~t~ 299 (369)
T 3d1c_A 224 IKQGARIEMNVHYTVKDIDFNNGQ-YHISFDSGQSVHTPHEPILATGFDATKNP--IVQQLFV-TTNQDIKLTTHDESTR 299 (369)
T ss_dssp HHTTCCEEEECSCCEEEEEEETTE-EEEEESSSCCEEESSCCEECCCBCGGGSH--HHHHHSC-CTTSCCCBCTTSBBSS
T ss_pred HhhCCcEEEecCcEEEEEEecCCc-eEEEecCCeEeccCCceEEeeccCCccch--hhhhhcc-CCCCCEEechhhcccC
Confidence 99997 999999999999765554 678888998775 5999999999999976 3444566 77889999986 6789
Q ss_pred CCcEEEeCcCCCCC----CChHHHHHhHHHHHHHHcCC
Q 008841 373 VPSIWAVGDVTDRI----NLTPVALMEGGALAKTLFQA 406 (551)
Q Consensus 373 ~~~vya~GD~~~~~----~~~~~A~~~g~~aa~~i~g~ 406 (551)
.|+|||+|||+..+ .....+..||+++|++|.+.
T Consensus 300 ~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~ 337 (369)
T 3d1c_A 300 YPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQR 337 (369)
T ss_dssp STTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHH
T ss_pred CCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcc
Confidence 99999999999853 23456778999999999874
No 71
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.5e-32 Score=279.43 Aligned_cols=298 Identities=20% Similarity=0.297 Sum_probs=203.3
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
++||+|||||++|+++|..|++.|++|+|||+ ...+||.|.+. .|...+... .....++.+....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~---------~~~~gg~~~~~--~~~~~~~~~----~~~~~~~~~~~~~ 67 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDA---------EASPGGAWQHA--WHSLHLFSP----AGWSSIPGWPMPA 67 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECC---------SSSSSGGGGGS--CTTCBCSSC----GGGSCCSSSCCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---------CCCCCCcccCC--CCCcEecCc----hhhhhCCCCCCCC
Confidence 58999999999999999999999999999993 45788888652 222111100 1111122221111
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEe--cCCEEE-E--cCEEEEeCeEEEcCC--CCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIV--DPHTVD-V--DGKLYSARHILISVG--GRPFI 223 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i--~~~~v~-v--~g~~~~~d~lviAtG--~~p~~ 223 (551)
..........+ ...+...+++.++++..+ ++..+ +...+. + ++..+.||+||+||| +.|..
T Consensus 68 ~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~ 136 (357)
T 4a9w_A 68 SQGPYPARAEV-----------LAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTWGEAYT 136 (357)
T ss_dssp CSSSSCBHHHH-----------HHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSGGGBCC
T ss_pred CccCCCCHHHH-----------HHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCCCCCCC
Confidence 10111111222 222334455668887665 44443 234444 4 444899999999999 57788
Q ss_pred CCCCCCCc----eecchhhhcCC-CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec-CccCCC--CCHHHHHHHHHH
Q 008841 224 PDIPGSEY----AIDSDAALDLP-SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ-KKVLRG--FDEDIRDFVAEQ 295 (551)
Q Consensus 224 p~i~g~~~----~~~~~~~~~~~-~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~-~~~l~~--~~~~~~~~l~~~ 295 (551)
|++||.+. ..+..+..... ..+++++|||+|.+|+|+|..|.+.+ +|+++.+. +.+++. ....+.+.+.+.
T Consensus 137 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~ 215 (357)
T 4a9w_A 137 PEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATER 215 (357)
T ss_dssp CCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----
T ss_pred CCCCCccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHH
Confidence 99998643 22222222222 24689999999999999999999998 69999988 455554 234444333333
Q ss_pred HH----------------------------hcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 296 MS----------------------------LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 296 l~----------------------------~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
+. +.|+ +..+..+.++.. + .+.+.+|+++++|.||+|+|++|++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~~ 289 (357)
T 4a9w_A 216 WKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP--T---GMQWADGTERAFDAVIWCTGFRPALSH 289 (357)
T ss_dssp ------------------CBCCCHHHHHHHHTTC-CCEECCCSEEET--T---EEECTTSCEEECSEEEECCCBCCCCGG
T ss_pred HhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeC--C---eeEECCCCEecCCEEEECCCcCCCCcc
Confidence 32 3444 555666777753 2 278889999999999999999999887
Q ss_pred CCccccCeeecCCCCeEeCCC--CCCCCCcEEEeC--cCCC-CCCChHHHHHhHHHHHHHHcC
Q 008841 348 LGLEKVGVKMTKNGAIEVDEY--SGTAVPSIWAVG--DVTD-RINLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 348 l~l~~~gl~~~~~G~i~vd~~--~~t~~~~vya~G--D~~~-~~~~~~~A~~~g~~aa~~i~g 405 (551)
++..++. +++|+|.||++ ++|+.|||||+| ||+. .+.....|..||+++|.||..
T Consensus 290 --l~~~gl~-~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 290 --LKGLDLV-TPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp --GTTTTCB-CTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHH
T ss_pred --cCccccc-CCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHH
Confidence 6788888 88899999999 899999999999 6676 357778899999999999863
No 72
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=1.9e-33 Score=294.29 Aligned_cols=276 Identities=20% Similarity=0.305 Sum_probs=201.9
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
..+||+|||||+||+++|..|++.|++|+|||+ ...+||.+.+ | +| .|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~---------~~~~GG~l~~-g-ip------------------~~--- 168 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDR---------YDRMGGLLVY-G-IP------------------GF--- 168 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECS---------SSSCSTHHHH-T-SC------------------TT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEec---------cCCCCCeeee-c-CC------------------Cc---
Confidence 468999999999999999999999999999993 4557776431 1 11 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEEEeCeEEEcCCCC-CCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGR-PFIPDIPGS 229 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~~~d~lviAtG~~-p~~p~i~g~ 229 (551)
... ..+.. ...+++.+.|++++.+... + ..+.++...+.||+||+|||+. |+.+++||.
T Consensus 169 -----~~~-~~~~~-----------~~~~~l~~~gv~~~~~~~v--~-~~v~~~~~~~~~d~vvlAtG~~~~~~~~ipG~ 228 (456)
T 2vdc_G 169 -----KLE-KSVVE-----------RRVKLLADAGVIYHPNFEV--G-RDASLPELRRKHVAVLVATGVYKARDIKAPGS 228 (456)
T ss_dssp -----TSC-HHHHH-----------HHHHHHHHTTCEEETTCCB--T-TTBCHHHHHSSCSEEEECCCCCEECCTTCSCC
T ss_pred -----cCC-HHHHH-----------HHHHHHHHCCcEEEeCCEe--c-cEEEhhHhHhhCCEEEEecCCCCCCCCCCCCC
Confidence 001 11111 1234556779998876421 1 1222222235799999999986 677888886
Q ss_pred C--ceecchhhhc------------------CCCCCCeEEEEcCcHHHHHHHHHHHhCCC-eEEEEeecCcc-CCCCCHH
Q 008841 230 E--YAIDSDAALD------------------LPSKPEKIAIVGGGYIALEFAGIFSGLTS-EVHVFIRQKKV-LRGFDED 287 (551)
Q Consensus 230 ~--~~~~~~~~~~------------------~~~~~~~vvViG~G~~g~e~a~~l~~~g~-~Vtlv~~~~~~-l~~~~~~ 287 (551)
+ .+++..+++. ....+++|+|||+|.+|+|+|..+.+.|. +|+++.|.+.. ++..+.+
T Consensus 229 ~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e 308 (456)
T 2vdc_G 229 GLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQRE 308 (456)
T ss_dssp TTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHH
T ss_pred cCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHH
Confidence 4 3443322211 12457899999999999999999999998 59999998875 5544433
Q ss_pred HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE---------C---------CC--eEEEeeEEEEecCcCCCCCC
Q 008841 288 IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT---------N---------KG--TVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 288 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~---------~---------~G--~~i~~d~vi~a~G~~p~~~~ 347 (551)
.+.+++.||++++++.++++..++ .+..|.+ . +| .++++|.||+|+|+.|++..
T Consensus 309 -----~~~~~~~Gv~~~~~~~~~~i~~~g-~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~ 382 (456)
T 2vdc_G 309 -----VAHAEEEGVEFIWQAAPEGFTGDT-VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLP 382 (456)
T ss_dssp -----HHHHHHTTCEEECCSSSCCEEEEE-EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHH
T ss_pred -----HHHHHHCCCEEEeCCCceEEeCCC-cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcch
Confidence 345778899999999999997532 1111111 1 23 36899999999999998752
Q ss_pred CCccccCeeecCCCCeEeCCC-CCCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHc
Q 008841 348 LGLEKVGVKMTKNGAIEVDEY-SGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLF 404 (551)
Q Consensus 348 l~l~~~gl~~~~~G~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~ 404 (551)
+.++..+++++++|+|.||++ +||+.|+|||+|||+..+.++..|+.||+.||.+|.
T Consensus 383 ~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~ 440 (456)
T 2vdc_G 383 NAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIH 440 (456)
T ss_dssp HHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHH
T ss_pred hhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHHHHHH
Confidence 116778899999999999997 999999999999999989999999999999999986
No 73
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=1.1e-32 Score=288.50 Aligned_cols=281 Identities=16% Similarity=0.174 Sum_probs=204.1
Q ss_pred CCCccEEEECCChHHHHHHHHHHh---CCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccC
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAAN---FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNG 146 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~---~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~ 146 (551)
..++||||||||++|+++|..|++ .|++|+|||+ .. ... ..|....+...
T Consensus 2 ~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~----------~~---~~~---~~~~~~~~~~g----------- 54 (437)
T 3sx6_A 2 RGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISA----------ND---YFQ---FVPSNPWVGVG----------- 54 (437)
T ss_dssp TTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECS----------SS---EEE---CGGGHHHHHHT-----------
T ss_pred CCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeC----------CC---CCc---ccCCccccccC-----------
Confidence 345799999999999999999999 8999999992 11 000 01211110000
Q ss_pred CCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCC
Q 008841 147 FGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--HTVDV-DGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 147 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~ 223 (551)
..+.. .+...+.+.+.+.+++++.+++..++. ..+.+ +++.+.||+||+|||++|+.
T Consensus 55 ---------~~~~~-----------~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 55 ---------WKERD-----------DIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp ---------SSCHH-----------HHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECG
T ss_pred ---------ccCHH-----------HHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCc
Confidence 00111 111122345566799999988888876 46666 67789999999999999999
Q ss_pred CCCCCCCc-------eecchhhhcCCC------CCCeEEEEcCcHH----H--HHHH----HHHHhCCCe-----EEEEe
Q 008841 224 PDIPGSEY-------AIDSDAALDLPS------KPEKIAIVGGGYI----A--LEFA----GIFSGLTSE-----VHVFI 275 (551)
Q Consensus 224 p~i~g~~~-------~~~~~~~~~~~~------~~~~vvViG~G~~----g--~e~a----~~l~~~g~~-----Vtlv~ 275 (551)
|++||.+. +.+.++...+.+ ..++++|||+|+. | +|+| ..+++.|.+ |++++
T Consensus 115 ~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~ 194 (437)
T 3sx6_A 115 ENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFIT 194 (437)
T ss_dssp GGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEE
T ss_pred ccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEc
Confidence 99999752 344555443321 1345688888554 3 7777 666777875 99999
Q ss_pred ecCccC----CCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE--CC-----CeEEEeeEEEEecCcCCC
Q 008841 276 RQKKVL----RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT--NK-----GTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 276 ~~~~~l----~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~--~~-----G~~i~~d~vi~a~G~~p~ 344 (551)
+.+.+. +.+ ++..+.+.+.+++.||+++++++|++++.+ + +.+.. .+ ++++++|.+++++|+.|+
T Consensus 195 ~~~~~~~~~l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~--~-v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~ 270 (437)
T 3sx6_A 195 SEPYIGHLGIQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVEDN--K-MYVTQVDEKGETIKEMVLPVKFGMMIPAFKGV 270 (437)
T ss_dssp SSSSTTCTTTTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEETT--E-EEEEEECTTSCEEEEEEEECSEEEEECCEECC
T ss_pred CCccccccccCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEECC--e-EEEEecccCCccccceEEEEeEEEEcCCCcCc
Confidence 988763 222 357888999999999999999999999643 3 33432 33 567999999999999887
Q ss_pred CCCCCccccCeeecCCCCeEeCCCCCC-CCCcEEEeCcCCCC------------CCChHHHHHhHHHHHHHHc
Q 008841 345 TKNLGLEKVGVKMTKNGAIEVDEYSGT-AVPSIWAVGDVTDR------------INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 345 ~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~vya~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 404 (551)
..+ .+..++ .+++|+|.||+++|| ++|||||+|||+.. ++++..|..||+++|+||.
T Consensus 271 ~~~--~~~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 271 PAV--AGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp HHH--HTSTTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hhh--hccccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 653 233566 578899999999998 99999999999973 4688899999999999986
No 74
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=5.2e-33 Score=318.02 Aligned_cols=278 Identities=22% Similarity=0.284 Sum_probs=206.3
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGA-SVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
..+||+|||||+||++||..|++.|+ +|+|||+ ...+||++. .++| .|..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~---------~~~~GG~~~--~~ip------------------~~~~ 236 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEK---------QEYVGGLST--SEIP------------------QFRL 236 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEES---------SSSCSTHHH--HTSC------------------TTTS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeC---------CCCCCcccc--ccCC------------------cccC
Confidence 35899999999999999999999999 7999993 456788742 1122 1111
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE-cCEEEEeCeEEEcCCC-CCCCCCC-
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV-DGKLYSARHILISVGG-RPFIPDI- 226 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v-~g~~~~~d~lviAtG~-~p~~p~i- 226 (551)
. ..... +..+.+++.||+++.++.. ..+.+.+ ++..+.||+||||||+ +|+.+++
T Consensus 237 --------~-~~~~~-----------~~~~~~~~~gv~~~~~~~v--~~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~ 294 (1025)
T 1gte_A 237 --------P-YDVVN-----------FEIELMKDLGVKIICGKSL--SENEITLNTLKEEGYKAAFIGIGLPEPKTDDIF 294 (1025)
T ss_dssp --------C-HHHHH-----------HHHHHHHTTTCEEEESCCB--STTSBCHHHHHHTTCCEEEECCCCCEECCCGGG
T ss_pred --------C-HHHHH-----------HHHHHHHHCCcEEEcccEe--ccceEEhhhcCccCCCEEEEecCCCCCCCCCCC
Confidence 0 11111 1234566789999887543 2223444 3345789999999998 5876654
Q ss_pred CCC---Cceecchhhhc----------------CCCCCCeEEEEcCcHHHHHHHHHHHhCCC-eEEEEeecC-ccCCCCC
Q 008841 227 PGS---EYAIDSDAALD----------------LPSKPEKIAIVGGGYIALEFAGIFSGLTS-EVHVFIRQK-KVLRGFD 285 (551)
Q Consensus 227 ~g~---~~~~~~~~~~~----------------~~~~~~~vvViG~G~~g~e~a~~l~~~g~-~Vtlv~~~~-~~l~~~~ 285 (551)
+|. ..+++..+++. +...+++|+|||+|++|+|+|..+.++|. +|+++++.+ .+++.++
T Consensus 295 ~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~ 374 (1025)
T 1gte_A 295 QGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVP 374 (1025)
T ss_dssp TTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCH
T ss_pred CCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCH
Confidence 454 34666555442 13346799999999999999999999996 899999987 4556565
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEEC------CC---------eEEEeeEEEEecCcCCCCCCCCc
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN------KG---------TVDGFSHVMFATGRRPNTKNLGL 350 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~------~G---------~~i~~d~vi~a~G~~p~~~~l~l 350 (551)
+++ +.+++.||++++++.++++..+++.+..|++. +| .++++|.||+|+|+.|+...+ +
T Consensus 375 ~e~-----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l-~ 448 (1025)
T 1gte_A 375 EEV-----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKV-K 448 (1025)
T ss_dssp HHH-----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHH-H
T ss_pred HHH-----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhh-h
Confidence 554 45778899999999999998754443334432 22 368999999999998754322 3
Q ss_pred cc-cCeeecCCCCeEeCC-CCCCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcC
Q 008841 351 EK-VGVKMTKNGAIEVDE-YSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 351 ~~-~gl~~~~~G~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g 405 (551)
.. .|++++++|+|.||+ ++||+.|+|||+|||+..+.++..|+.||+.||.+|.+
T Consensus 449 ~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~ 505 (1025)
T 1gte_A 449 EALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHK 505 (1025)
T ss_dssp HHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHH
T ss_pred hcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 33 589999899999997 89999999999999999888999999999999999974
No 75
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.98 E-value=4.8e-31 Score=277.77 Aligned_cols=293 Identities=15% Similarity=0.128 Sum_probs=200.7
Q ss_pred ccEEEECCChHHHHHHHHHHh---CCCc---EEEEccCCCCCCCCCCCCCCCeecc---CCCcchHHHHHhhhh------
Q 008841 73 FDLFTIGAGSGGVRASRFAAN---FGAS---VAICELPFSTISSETTGGVGGTCVL---RGCVPKKLLVYASKF------ 137 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~---~G~~---V~liE~~~~~~~~~~~~~~GG~~~~---~g~~p~~~l~~~~~~------ 137 (551)
+||+|||||++|+++|..|++ .|++ |+|||+ ...+||+|.+ .||.|........-+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~---------~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~ 73 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEK---------QADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSN 73 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECS---------SSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEc---------CCCCCCEeecCCCCCccccCCCCcCccccchhhc
Confidence 699999999999999999999 9999 999993 4578999976 345432110000000
Q ss_pred -hhHhhhccCCCcccC----CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeE--EEEe-EEEEec--CC----EEEE
Q 008841 138 -SHEFDESNGFGWKYG----TEPQHDWSTLIANKNAELQRLTGIYKNILINAGIT--LIEG-RGKIVD--PH----TVDV 203 (551)
Q Consensus 138 -~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~-~~~~i~--~~----~v~v 203 (551)
......+..|.+... .........+..+ +...+++.+++ +..+ ++..++ .. .+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~ 142 (464)
T 2xve_A 74 GPKECLEFADYTFDEHFGKPIASYPPREVLWDY-----------IKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTV 142 (464)
T ss_dssp SCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHH-----------HHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEE
T ss_pred CChhhcccCCCCCCcccCCCCCCCCCHHHHHHH-----------HHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEE
Confidence 000001111111100 0111222222222 22333334554 3322 344332 22 5555
Q ss_pred -c---C--EEEEeCeEEEcCC--CCCCCCCCCCCCc----eecchhhhcCC-CCCCeEEEEcCcHHHHHHHHHHHhCCCe
Q 008841 204 -D---G--KLYSARHILISVG--GRPFIPDIPGSEY----AIDSDAALDLP-SKPEKIAIVGGGYIALEFAGIFSGLTSE 270 (551)
Q Consensus 204 -~---g--~~~~~d~lviAtG--~~p~~p~i~g~~~----~~~~~~~~~~~-~~~~~vvViG~G~~g~e~a~~l~~~g~~ 270 (551)
+ + .++.||+||+||| +.|+.|++||.+. ++++.++.... ..+++|+|||+|++|+|+|..|.+.|.+
T Consensus 143 ~~~~~g~~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~ 222 (464)
T 2xve_A 143 QDHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAK 222 (464)
T ss_dssp EETTTTEEEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCS
T ss_pred EEcCCCceEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCe
Confidence 3 3 6789999999999 8999999999753 44555444332 2579999999999999999999999999
Q ss_pred EEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCc
Q 008841 271 VHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGL 350 (551)
Q Consensus 271 Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l 350 (551)
|+++++.+.+++..- ..||+++ ..|++++ ++ .|.+.||+++++|.||+|||++|+.+++.
T Consensus 223 V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~--~~---~V~~~dG~~i~~D~Vi~atG~~p~~~~l~- 282 (464)
T 2xve_A 223 KLISCYRTAPMGYKW------------PENWDER--PNLVRVD--TE---NAYFADGSSEKVDAIILCTGYIHHFPFLN- 282 (464)
T ss_dssp EEEEECSSCCCCCCC------------CTTEEEC--SCEEEEC--SS---EEEETTSCEEECSEEEECCCBCCCCTTBC-
T ss_pred EEEEEECCCCCCCCC------------CCceEEc--CCeEEEe--CC---EEEECCCCEEeCCEEEECCCCCCCCCCcC-
Confidence 999999887765311 2478887 5788884 22 37788999999999999999999998853
Q ss_pred cccCeeecCCCCeEeCCC---CCCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCCC
Q 008841 351 EKVGVKMTKNGAIEVDEY---SGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAE 407 (551)
Q Consensus 351 ~~~gl~~~~~G~i~vd~~---~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 407 (551)
+..++.++++|.+ ++.+ ++|+.|+|||+||++.. ..++.|..||++++.++.|..
T Consensus 283 ~~~gl~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~-~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 283 DDLRLVTNNRLWP-LNLYKGVVWEDNPKFFYIGMQDQW-YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp TTTCCCCCSSSCC-SSEETTTEESSSTTEEECSCSCCS-SCHHHHHHHHHHHHHHHTTSS
T ss_pred cccccccCCCccc-ccccceEecCCCCCEEEEeCcccc-cchHHHHHHHHHHHHHHcCCC
Confidence 3467887766555 4533 56899999999999874 568899999999999999853
No 76
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.98 E-value=1.6e-31 Score=277.66 Aligned_cols=276 Identities=19% Similarity=0.179 Sum_probs=205.4
Q ss_pred ccEEEECCChHHHHHHHHHHh---CCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 73 FDLFTIGAGSGGVRASRFAAN---FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~---~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
.||+|||||++|+++|..|++ .|.+|+|||+ ....+.. .+.+ +
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~---------~~~~~~~----~~~~---------------------~ 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINK---------SRFSYFR----PALP---------------------H 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEES---------SSEEEEC----CSSC---------------------C
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeC---------CCCceec----cchh---------------------h
Confidence 589999999999999999999 8999999993 1111110 0111 0
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCC--EEEE-cC----EEEEeCeEEEcCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPH--TVDV-DG----KLYSARHILISVGGRPF 222 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~--~v~v-~g----~~~~~d~lviAtG~~p~ 222 (551)
...+ ..+..++ ...+.+.+.+.+++++.+++..++.. .+.+ ++ .++.||+||+|||++|.
T Consensus 48 ~~~~--~~~~~~~-----------~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 48 VAIG--VRDVDEL-----------KVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CCSS--CCCCCCE-----------EEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred cccC--CcCHHHH-----------HHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 0000 0000000 01112334556999999988887654 6666 33 34899999999999999
Q ss_pred CCCCCCCC----ceecchhhhcCC----CCCCeEEEEcCcH-------------------------HHHHHH----HHHH
Q 008841 223 IPDIPGSE----YAIDSDAALDLP----SKPEKIAIVGGGY-------------------------IALEFA----GIFS 265 (551)
Q Consensus 223 ~p~i~g~~----~~~~~~~~~~~~----~~~~~vvViG~G~-------------------------~g~e~a----~~l~ 265 (551)
.|++||.+ .+.+.++...+. ...++++|||+|. +++|+| ..++
T Consensus 115 ~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~ 194 (409)
T 3h8l_A 115 TELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFK 194 (409)
T ss_dssp GGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHH
T ss_pred ccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHH
Confidence 99899864 233444443322 1235677999991 466766 5566
Q ss_pred hCCC----eEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCc
Q 008841 266 GLTS----EVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGR 341 (551)
Q Consensus 266 ~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~ 341 (551)
+.|. +|+++++.+ +++.+++++.+.+.+.+++.||+++++++|++++.+ + |.+.+|+++++|.||+++|+
T Consensus 195 ~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~---v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 195 KKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREH--E---IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp TTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSS--E---EEETTSCEEECSEEEEECCE
T ss_pred HcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCC--e---EEECCCCEEeeeEEEECCCC
Confidence 7784 899999988 777889999999999999999999999999999642 2 78889999999999999999
Q ss_pred CCCCCCCCcccc--CeeecCCCCeEeCCCCCC-CCCcEEEeCcCCC--CCCChHHHHHhHHHHHHHHcC
Q 008841 342 RPNTKNLGLEKV--GVKMTKNGAIEVDEYSGT-AVPSIWAVGDVTD--RINLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 342 ~p~~~~l~l~~~--gl~~~~~G~i~vd~~~~t-~~~~vya~GD~~~--~~~~~~~A~~~g~~aa~~i~g 405 (551)
.|+.. +... ++ .+++|+|.||+++|| +.|||||+|||+. .++++..|..||+++|+||.+
T Consensus 269 ~~~~~---l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 269 TGNPA---LKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp ECCHH---HHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CccHH---HHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99853 4555 44 367889999999998 9999999999997 368899999999999999864
No 77
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=1.1e-31 Score=278.07 Aligned_cols=304 Identities=17% Similarity=0.225 Sum_probs=210.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFG--ASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
++|||||||+||+++|.+|++.+ .+|+|||+ ......| +.+.... ...
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~----------~~~~~~~----p~~~~v~--~g~-------------- 52 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP----------NETYYTC----YMSNEVI--GGD-------------- 52 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS----------CSSEECS----TTHHHHH--HTS--------------
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC----------CCCCCCc----cCHHHHh--cCC--------------
Confidence 57999999999999999998854 69999992 2211111 1111110 000
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--HTVDV-DGKLYSARHILISVGGRPFIPDIP 227 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~p~i~ 227 (551)
.+...+... + +.+.+.+++++.+++..+|+ +.+.+ ++.++.||+||+|||+++.++++|
T Consensus 53 ------~~~~~~~~~-----------~-~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~ 114 (401)
T 3vrd_B 53 ------RELASLRVG-----------Y-DGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIE 114 (401)
T ss_dssp ------SCGGGGEEC-----------S-HHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGGSB
T ss_pred ------CCHHHHhhC-----------H-HHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccCCcc
Confidence 000000000 0 11334599999999998875 45666 778999999999999999999999
Q ss_pred CCCc---------eecchhhhcCC------CCCCeEEEEcCc----------HHHHHHHHHHHhCC--CeEEEEeecCcc
Q 008841 228 GSEY---------AIDSDAALDLP------SKPEKIAIVGGG----------YIALEFAGIFSGLT--SEVHVFIRQKKV 280 (551)
Q Consensus 228 g~~~---------~~~~~~~~~~~------~~~~~vvViG~G----------~~g~e~a~~l~~~g--~~Vtlv~~~~~~ 280 (551)
|.+. ..+.++...+. .....+++.+++ ..+++++..+++.+ .+|+++++.+.+
T Consensus 115 G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~ 194 (401)
T 3vrd_B 115 GYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTF 194 (401)
T ss_dssp TCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSC
T ss_pred CchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccc
Confidence 8642 11222222111 122334433221 14567777777654 689999988876
Q ss_pred CC--CCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeec
Q 008841 281 LR--GFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMT 358 (551)
Q Consensus 281 l~--~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~ 358 (551)
.. .+++.+.+.+.+.+++.||++++++++..++.+.+. ..+.+.+|+++++|.+++++|.+|+. + ++++++ .+
T Consensus 195 ~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~-~~v~~~~g~~i~~D~vi~~~g~~~~~-~--~~~~gl-~~ 269 (401)
T 3vrd_B 195 SKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA-MTVETSFGETFKAAVINLIPPQRAGK-I--AQSASL-TN 269 (401)
T ss_dssp TTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT-TEEEETTSCEEECSEEEECCCEEECH-H--HHHTTC-CC
T ss_pred cccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc-eEEEcCCCcEEEeeEEEEecCcCCch-h--Hhhccc-cc
Confidence 43 356677777777788999999999999999887665 67899999999999999999999974 3 677888 47
Q ss_pred CCCCeEeCCC-CC-CCCCcEEEeCcCCCC---CCChHHHHHhHHHHHHHHc----CCCCCCCCCCCccEEEecCCceEEe
Q 008841 359 KNGAIEVDEY-SG-TAVPSIWAVGDVTDR---INLTPVALMEGGALAKTLF----QAEPTKPDYSAVPSAVFSQPPIGQV 429 (551)
Q Consensus 359 ~~G~i~vd~~-~~-t~~~~vya~GD~~~~---~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~~~~~~~~~~~~~v 429 (551)
++|+|.||++ +| |++|||||+|||++. +++++.|.+||+++|+||+ |+++....|....++.. .+..+.+
T Consensus 270 ~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~~~~~~~-~~~~~~~ 348 (401)
T 3vrd_B 270 DSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGTPSYLNTCYSIL-APGYGIS 348 (401)
T ss_dssp TTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEEEEEEEE-ETTEEEE
T ss_pred cCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCeEEEEE-ecCCceE
Confidence 8899999987 65 799999999999864 5789999999999999986 55444444544443322 2344444
Q ss_pred e
Q 008841 430 G 430 (551)
Q Consensus 430 G 430 (551)
.
T Consensus 349 ~ 349 (401)
T 3vrd_B 349 I 349 (401)
T ss_dssp E
T ss_pred E
Confidence 4
No 78
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=6.6e-32 Score=282.98 Aligned_cols=276 Identities=15% Similarity=0.185 Sum_probs=201.4
Q ss_pred CccEEEECCChHHHHHHHHHHh-C------CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhc
Q 008841 72 DFDLFTIGAGSGGVRASRFAAN-F------GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDES 144 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~-~------G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~ 144 (551)
.+||+|||||+||+++|..|++ . |.+|+|||+ ...+||.| ++||.|.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~---------~~~~gg~~-~~gv~p~~~-------------- 58 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEM---------LPTPWGLV-RSGVAPDHP-------------- 58 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEES---------SSSCSTHH-HHTSCTTCT--------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEec---------CCCCCCcc-ccccCCCCC--------------
Confidence 4799999999999999999999 7 999999993 33577877 456655211
Q ss_pred cCCCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEEEeCeEEEcCCCC-CCC
Q 008841 145 NGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGR-PFI 223 (551)
Q Consensus 145 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~~~d~lviAtG~~-p~~ 223 (551)
....+ ...+...+.+.+++++.+. . ++ +.+.++...+.||+||+|||+. |+.
T Consensus 59 -------------~~~~~-----------~~~~~~~~~~~~v~~~~~v-~-v~-~~v~~~~~~~~~d~lViAtG~~~~~~ 111 (456)
T 1lqt_A 59 -------------KIKSI-----------SKQFEKTAEDPRFRFFGNV-V-VG-EHVQPGELSERYDAVIYAVGAQSDRM 111 (456)
T ss_dssp -------------GGGGG-----------HHHHHHHHTSTTEEEEESC-C-BT-TTBCHHHHHHHSSEEEECCCCCEECC
T ss_pred -------------CHHHH-----------HHHHHHHHhcCCCEEEeeE-E-EC-CEEEECCCeEeCCEEEEeeCCCCCCC
Confidence 00111 1122334556789988763 2 32 2344422257899999999997 688
Q ss_pred CCCCCCC--ceecchhhh-----------cCCC-CCCeEEEEcCcHHHHHHHHHHHhC--------------------C-
Q 008841 224 PDIPGSE--YAIDSDAAL-----------DLPS-KPEKIAIVGGGYIALEFAGIFSGL--------------------T- 268 (551)
Q Consensus 224 p~i~g~~--~~~~~~~~~-----------~~~~-~~~~vvViG~G~~g~e~a~~l~~~--------------------g- 268 (551)
|++||.+ .+++..++. .+.. .+++++|||+|++|+|+|..|.+. |
T Consensus 112 ~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~ 191 (456)
T 1lqt_A 112 LNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGI 191 (456)
T ss_dssp CCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCC
T ss_pred CCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCC
Confidence 8899864 355555442 2222 478999999999999999999874 5
Q ss_pred CeEEEEeecCccCCCCCH-------------------HH------------------HHHHHHHHHh------cCcEEEc
Q 008841 269 SEVHVFIRQKKVLRGFDE-------------------DI------------------RDFVAEQMSL------RGIEFHT 305 (551)
Q Consensus 269 ~~Vtlv~~~~~~l~~~~~-------------------~~------------------~~~l~~~l~~------~Gv~i~~ 305 (551)
.+|+++.|.+.+...+.+ ++ .+.+.+.+++ +||++++
T Consensus 192 ~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~ 271 (456)
T 1lqt_A 192 QEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRF 271 (456)
T ss_dssp CEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEEC
T ss_pred cEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEe
Confidence 499999998876544331 11 2344555555 7999999
Q ss_pred CcccEEEEEcCCceEEEEEC----------------CC--eEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCC
Q 008841 306 EESPQAILKSTDGSLSVKTN----------------KG--TVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDE 367 (551)
Q Consensus 306 ~~~v~~i~~~~~~~~~V~~~----------------~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~ 367 (551)
++.+.+|..++ ....|++. +| ++++||.||+|+|++|++ + .+++++++|+|.+|+
T Consensus 272 ~~~~~~i~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l-----~gl~~d~~g~i~vn~ 344 (456)
T 1lqt_A 272 LTSPIEIKGKR-KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T-----PGLPFDDQSGTIPNV 344 (456)
T ss_dssp SEEEEEEECSS-SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-----TTSCCBTTTTBCCEE
T ss_pred CCCCeEEecCC-cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C-----CCCcccCCCCeeECC
Confidence 99999998653 21223332 34 469999999999999988 2 367788889999999
Q ss_pred CCC-CCCCcEEEeCcCCCCCC-ChHHHHHhHHHHHHHHcC
Q 008841 368 YSG-TAVPSIWAVGDVTDRIN-LTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 368 ~~~-t~~~~vya~GD~~~~~~-~~~~A~~~g~~aa~~i~g 405 (551)
++| |+.|+|||+|||+..+. ....|+.||+.+|.+|++
T Consensus 345 ~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 345 GGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp TTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 999 89999999999997654 566899999999999874
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=1.9e-31 Score=279.81 Aligned_cols=277 Identities=17% Similarity=0.208 Sum_probs=199.6
Q ss_pred CccEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFG--ASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
.+||+|||||++|+++|..|++.| .+|+|||+ ...+||.+ +.+|.|.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~---------~~~~gg~~-~~g~~p~~~------------------- 56 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEK---------QLVPFGLV-RFGVAPDHP------------------- 56 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECS---------SSSSCTHH-HHTSCTTCG-------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeC---------CCcCCcee-ecccCCCCc-------------------
Confidence 479999999999999999999988 99999993 33456654 445555210
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEEEeCeEEEcCCCCC-CCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRP-FIPDIPG 228 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~~~d~lviAtG~~p-~~p~i~g 228 (551)
....+ ...+.+.+++.+++++.+.. ++ ..+.++...+.||+||+|||+.+ +.|++||
T Consensus 57 --------~~~~~-----------~~~~~~~~~~~gv~~~~~~~--v~-~~V~~~~~~~~~d~lVlAtGs~~~~~~~ipG 114 (460)
T 1cjc_A 57 --------EVKNV-----------INTFTQTARSDRCAFYGNVE--VG-RDVTVQELQDAYHAVVLSYGAEDHQALDIPG 114 (460)
T ss_dssp --------GGGGH-----------HHHHHHHHTSTTEEEEBSCC--BT-TTBCHHHHHHHSSEEEECCCCCEECCCCCTT
T ss_pred --------cHHHH-----------HHHHHHHHHhCCcEEEeeeE--Ee-eEEEeccceEEcCEEEEecCcCCCCCCCCCC
Confidence 00111 12233455667898877532 11 22333333468999999999995 7788999
Q ss_pred CC--ceecchhhhc----------CC-C-CCCeEEEEcCcHHHHHHHHHHH--------------------hCCC-eEEE
Q 008841 229 SE--YAIDSDAALD----------LP-S-KPEKIAIVGGGYIALEFAGIFS--------------------GLTS-EVHV 273 (551)
Q Consensus 229 ~~--~~~~~~~~~~----------~~-~-~~~~vvViG~G~~g~e~a~~l~--------------------~~g~-~Vtl 273 (551)
.+ .+++..+++. +. . .+++++|||+|++|+|+|..|. +.+. +|++
T Consensus 115 ~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~l 194 (460)
T 1cjc_A 115 EELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWI 194 (460)
T ss_dssp TTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEE
T ss_pred CCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEE
Confidence 64 4666555421 11 2 3789999999999999999998 5677 7999
Q ss_pred EeecCcc--------------CCCC-------------------CHH---HHHHHHHHHHh--------------cCcEE
Q 008841 274 FIRQKKV--------------LRGF-------------------DED---IRDFVAEQMSL--------------RGIEF 303 (551)
Q Consensus 274 v~~~~~~--------------l~~~-------------------~~~---~~~~l~~~l~~--------------~Gv~i 303 (551)
+.|.+.+ ++.. +.. +.+.+.+.+++ +||++
T Consensus 195 v~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~ 274 (460)
T 1cjc_A 195 VGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGL 274 (460)
T ss_dssp ECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEE
T ss_pred EEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEE
Confidence 9998865 2210 010 23344455555 89999
Q ss_pred EcCcccEEEEEcC-C-ceEEEEEC---------------CC--eEEEeeEEEEecCcCCCCCCCCccccCe-eecCCCCe
Q 008841 304 HTEESPQAILKST-D-GSLSVKTN---------------KG--TVDGFSHVMFATGRRPNTKNLGLEKVGV-KMTKNGAI 363 (551)
Q Consensus 304 ~~~~~v~~i~~~~-~-~~~~V~~~---------------~G--~~i~~d~vi~a~G~~p~~~~l~l~~~gl-~~~~~G~i 363 (551)
++++.+.+|..++ + .+..|++. +| ++++||.||+|+|++|++ + .|+ +++++|+|
T Consensus 275 ~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l-----~gl~~~d~~g~i 348 (460)
T 1cjc_A 275 RFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I-----DPSVPFDPKLGV 348 (460)
T ss_dssp ECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C-----CTTSCCBTTTTB
T ss_pred ECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C-----CCCcccccCCCe
Confidence 9999999998763 3 32234332 34 479999999999999997 2 467 78888999
Q ss_pred EeCCCCCCC-CCcEEEeCcCCCCCC-ChHHHHHhHHHHHHHHcC
Q 008841 364 EVDEYSGTA-VPSIWAVGDVTDRIN-LTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 364 ~vd~~~~t~-~~~vya~GD~~~~~~-~~~~A~~~g~~aa~~i~g 405 (551)
.||+++||+ +|+|||+|||+..+. .+..|+.||+.+|.+|++
T Consensus 349 ~vn~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 349 VPNMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp CCEETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eECCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHH
Confidence 999999998 799999999997654 567899999999999874
No 80
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=3e-30 Score=271.02 Aligned_cols=294 Identities=16% Similarity=0.120 Sum_probs=194.6
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCC--cEEEEccCCCCCCCCCCCCCCCeeccCCCcc------hHHH-------HH--
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGA--SVAICELPFSTISSETTGGVGGTCVLRGCVP------KKLL-------VY-- 133 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p------~~~l-------~~-- 133 (551)
+.+||+|||||++|+++|..|++.|. +|+|||+ ...+||.|.+.+|.. .... ..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~---------~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~ 75 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFER---------RGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPA 75 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECS---------SSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEec---------CCCCCCeecCCCCCCccccccccccccccccccccc
Confidence 45899999999999999999999999 9999993 456899998766522 1000 00
Q ss_pred -----hhhh--------hhHhhhccCCCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEec--
Q 008841 134 -----ASKF--------SHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVD-- 197 (551)
Q Consensus 134 -----~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~-- 197 (551)
.... ......+..+.+............+..+... ..++.+..+..+ ++..++
T Consensus 76 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------~~~~~~~~i~~~t~V~~v~~~ 144 (447)
T 2gv8_A 76 ALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRI-----------YAQPLLPFIKLATDVLDIEKK 144 (447)
T ss_dssp SCCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHH-----------HHGGGGGGEECSEEEEEEEEE
T ss_pred ccCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHH-----------HHHHhhCeEEeCCEEEEEEeC
Confidence 0000 0001111111111110111122232222222 222222222222 233332
Q ss_pred CC--EEEE-c---CE---EEEeCeEEEcCCC--CCCCCCCCCCCc--------eecchhhhcCCC-CCCeEEEEcCcHHH
Q 008841 198 PH--TVDV-D---GK---LYSARHILISVGG--RPFIPDIPGSEY--------AIDSDAALDLPS-KPEKIAIVGGGYIA 257 (551)
Q Consensus 198 ~~--~v~v-~---g~---~~~~d~lviAtG~--~p~~p~i~g~~~--------~~~~~~~~~~~~-~~~~vvViG~G~~g 257 (551)
.. .+.+ + ++ ++.||+||+|||. .|+.|++||.+. ++++.++..... .+++|+|||+|++|
T Consensus 145 ~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg 224 (447)
T 2gv8_A 145 DGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSA 224 (447)
T ss_dssp TTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHH
T ss_pred CCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCH
Confidence 22 4444 3 54 7899999999997 889999999642 455554443322 47899999999999
Q ss_pred HHHHHHHHhCCCe-EEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeE-EEeeEE
Q 008841 258 LEFAGIFSGLTSE-VHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTV-DGFSHV 335 (551)
Q Consensus 258 ~e~a~~l~~~g~~-Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~-i~~d~v 335 (551)
+|+|..|++.+.+ |+++++.+.+ ++..||.+ +..|+++..+++ .|.+.||+. +++|.|
T Consensus 225 ~e~A~~l~~~~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~~---~v~~~dG~~~~~~D~v 284 (447)
T 2gv8_A 225 NDLVRHLTPVAKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDPTTR---EIYLKGGKVLSNIDRV 284 (447)
T ss_dssp HHHHHHHTTTSCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEETTTT---EEEETTTEEECCCSEE
T ss_pred HHHHHHHHHHhCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEecCCC---EEEECCCCEeccCCEE
Confidence 9999999999999 9999998764 34567774 467888864433 478889986 789999
Q ss_pred EEecCcCCCCCC-----CCccccCeeecCCCCeEeCCCCC---CCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCCC
Q 008841 336 MFATGRRPNTKN-----LGLEKVGVKMTKNGAIEVDEYSG---TAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQAE 407 (551)
Q Consensus 336 i~a~G~~p~~~~-----l~l~~~gl~~~~~G~i~vd~~~~---t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 407 (551)
|+|||+.|+.++ +.....++.. ++.+.++.+.+ ++.|+||++||+.... .++.|..||+++|+++.|..
T Consensus 285 i~atG~~~~~~~l~~~~l~~~~~~i~~--~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 285 IYCTGYLYSVPFPSLAKLKSPETKLID--DGSHVHNVYQHIFYIPDPTLAFVGLALHVV-PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp EECCCBCCCCCCHHHHSCCSTTTCCCS--SSSSCCSEETTTEETTCTTEEESSCCBSSC-HHHHHHHHHHHHHHHHTTSS
T ss_pred EECCCCCcCCCCCcccccccccCceec--CCCcccccccccccCCCCcEEEEecccccc-CchHHHHHHHHHHHHHcCCC
Confidence 999999999987 5311123333 35566666666 6899999999998764 68899999999999999853
No 81
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.97 E-value=3.1e-31 Score=277.16 Aligned_cols=278 Identities=15% Similarity=0.128 Sum_probs=195.5
Q ss_pred CccEEEECCChHHHHHHHHHHh--CCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 72 DFDLFTIGAGSGGVRASRFAAN--FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
++||||||||++|+++|..|++ .|++|+|||+ ....++ .|......... ........
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~---------~~~~~~-------~~~~~~~~~g~-----~~~~~~~~ 60 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISD---------RPYFGF-------TPAFPHLAMGW-----RKFEDISV 60 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS---------SSEEEC-------GGGHHHHHHTC-----SCGGGSEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECC---------CCCCCc-------CCCcchhccCc-----cCHHHHHH
Confidence 3699999999999999999999 8899999993 222221 12111110000 00000000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCC--EEEE-cCEEEEeCeEEEcCCCCCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPH--TVDV-DGKLYSARHILISVGGRPFIPDI 226 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~--~v~v-~g~~~~~d~lviAtG~~p~~p~i 226 (551)
.+...+++.+++++.+++..+++. .+.+ +++.+.||+||+|||++|..|.+
T Consensus 61 --------------------------~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~ 114 (430)
T 3h28_A 61 --------------------------PLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAE 114 (430)
T ss_dssp --------------------------ESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECCSB
T ss_pred --------------------------HHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccCCC
Confidence 011223456899998888888754 5666 66789999999999999877643
Q ss_pred C--C-CCceecchhhhcCCC------CCCeEEEEcCcHHH------HHHH----HHHHhCC----CeEEEEeecCccC--
Q 008841 227 P--G-SEYAIDSDAALDLPS------KPEKIAIVGGGYIA------LEFA----GIFSGLT----SEVHVFIRQKKVL-- 281 (551)
Q Consensus 227 ~--g-~~~~~~~~~~~~~~~------~~~~vvViG~G~~g------~e~a----~~l~~~g----~~Vtlv~~~~~~l-- 281 (551)
. + ...+.+.++...+.+ ..++++|||+|+.+ +|+| ..+++.| .+|+++++.+.+.
T Consensus 115 ~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~ 194 (430)
T 3h28_A 115 GQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHF 194 (430)
T ss_dssp THHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCT
T ss_pred CCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCcccccc
Confidence 2 1 112445555543321 13456788887543 7777 5566677 4899999988762
Q ss_pred --CCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEEC--CCeEEEeeEEEEecCcCCCCCCCCccc--cCe
Q 008841 282 --RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN--KGTVDGFSHVMFATGRRPNTKNLGLEK--VGV 355 (551)
Q Consensus 282 --~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~--~G~~i~~d~vi~a~G~~p~~~~l~l~~--~gl 355 (551)
+.. ++..+.+.+.+++.||++++++.|++++.+ + +.+... +++++++|.|++++|+.|+.. +.+ .++
T Consensus 195 ~l~~~-~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~--~-v~~~~~~~~g~~i~~D~vv~a~G~~~~~~---l~~~~~gl 267 (430)
T 3h28_A 195 GVGGI-GASKRLVEDLFAERNIDWIANVAVKAIEPD--K-VIYEDLNGNTHEVPAKFTMFMPSFQGPEV---VASAGDKV 267 (430)
T ss_dssp TTTCS-TTHHHHHHHHHHHTTCEEECSCEEEEECSS--E-EEEECTTSCEEEEECSEEEEECEEECCHH---HHTTCTTT
T ss_pred ccCcc-hHHHHHHHHHHHHCCCEEEeCCEEEEEeCC--e-EEEEecCCCceEEeeeEEEECCCCccchh---HhhccccC
Confidence 222 357888999999999999999999999543 3 333321 267899999999999998764 233 466
Q ss_pred eecCCC-CeEeCCCCCC-CCCcEEEeCcCCCC------------CCChHHHHHhHHHHHHHHc
Q 008841 356 KMTKNG-AIEVDEYSGT-AVPSIWAVGDVTDR------------INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 356 ~~~~~G-~i~vd~~~~t-~~~~vya~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 404 (551)
.+++| +|.||+++|| ++|||||+|||+.. ++++..|..||+++|+||.
T Consensus 268 -~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~ 329 (430)
T 3h28_A 268 -ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp -BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred -cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 57889 9999999998 99999999999984 4688999999999999986
No 82
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.97 E-value=7.6e-31 Score=273.90 Aligned_cols=278 Identities=17% Similarity=0.167 Sum_probs=190.1
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.+|||||||+||+++|.+|++. +.+|+|||+ .... .+.|....+..... .....
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~---------~~~~-------~~~p~l~~v~~g~~-----~~~~i--- 58 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD---------RPYF-------GFTPAFPHLAMGWR-----KFEDI--- 58 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS---------SSEE-------ECGGGHHHHHHTCS-----CGGGS---
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC---------CCCC-------ccCccHHHHhcCCC-----CHHHh---
Confidence 4799999999999999999984 479999992 1110 01121111100000 00000
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--CEEEE-cCEEEEeCeEEEcCCCCCCCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--HTVDV-DGKLYSARHILISVGGRPFIPDIP 227 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~~v~v-~g~~~~~d~lviAtG~~p~~p~i~ 227 (551)
..+ +..++.+.+|+++.+++..+|+ ++|.+ +++++.||+||||||+++. +++|
T Consensus 59 -----~~~------------------~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~i~ 114 (430)
T 3hyw_A 59 -----SVP------------------LAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAE 114 (430)
T ss_dssp -----EEE------------------STTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CCSB
T ss_pred -----hhc------------------HHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-CCcc
Confidence 000 1123445689999999998875 56777 7789999999999999864 4688
Q ss_pred CCC----ceecchhhhcCCC------CCCeEEEEcCcH------HHHHH----HHHHHhCC----CeEEEEeecCccC--
Q 008841 228 GSE----YAIDSDAALDLPS------KPEKIAIVGGGY------IALEF----AGIFSGLT----SEVHVFIRQKKVL-- 281 (551)
Q Consensus 228 g~~----~~~~~~~~~~~~~------~~~~vvViG~G~------~g~e~----a~~l~~~g----~~Vtlv~~~~~~l-- 281 (551)
|.+ .+.+.++...+.+ ..+.++|+|++. .+.|+ +..+.+.| .+|++++..+.+.
T Consensus 115 G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~ 194 (430)
T 3hyw_A 115 GQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHF 194 (430)
T ss_dssp THHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCT
T ss_pred CcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhc
Confidence 853 2344555443221 123455555542 23343 34455555 4788888776543
Q ss_pred -CCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCCCCCCCccccC--ee
Q 008841 282 -RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPNTKNLGLEKVG--VK 356 (551)
Q Consensus 282 -~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~~~~l~l~~~g--l~ 356 (551)
+...+...+.+.+.++++||++++++.|++++. ++ +.+...+| +++++|.+++++|.+|+.. +...+ +.
T Consensus 195 ~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~-~~~~~~~g~~~~i~~d~vi~~~G~~~~~~---~~~~~~~l~ 268 (430)
T 3hyw_A 195 GVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DK-VIYEDLNGNTHEVPAKFTMFMPSFQGPEV---VASAGDKVA 268 (430)
T ss_dssp TTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SE-EEEECTTSCEEEEECSEEEEECEEECCHH---HHTTCTTTB
T ss_pred cchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC--Cc-eEEEeeCCCceEeecceEEEeccCCCchH---HHhcccccc
Confidence 235567788899999999999999999999953 33 55555454 4799999999999999753 33333 44
Q ss_pred ecCCCCeEeCCCCC-CCCCcEEEeCcCCCC------------CCChHHHHHhHHHHHHHHc
Q 008841 357 MTKNGAIEVDEYSG-TAVPSIWAVGDVTDR------------INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 357 ~~~~G~i~vd~~~~-t~~~~vya~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 404 (551)
.+.+|+|.||++|| |++|||||+|||+.. ++++..|.+||+++|+||.
T Consensus 269 ~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 269 NPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp CTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 45667899999999 899999999999963 4678899999999999987
No 83
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=7.7e-31 Score=290.46 Aligned_cols=273 Identities=17% Similarity=0.265 Sum_probs=199.8
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
...+||+|||||+||++||..|++.|++|+|||+ ...+||+|....++|..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~---------~~~~GG~~~~~~~~pg~-------------------- 437 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDT---------AEKIGGHLNQVAALPGL-------------------- 437 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS---------SSSTTTTHHHHTTSTTC--------------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeC---------CCCcCCeeeecccCCCh--------------------
Confidence 4468999999999999999999999999999993 45688887655444421
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEE-cCEEEEeCeEEEcCCCC--------
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV-DGKLYSARHILISVGGR-------- 220 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v-~g~~~~~d~lviAtG~~-------- 220 (551)
.+|..+..+....++.+. .....++++..+ ..+.+ ++..+.||+||+|||+.
T Consensus 438 -------~~~~~~~~~~~~~i~~~~-----~~~~~~v~i~~~-------~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~ 498 (729)
T 1o94_A 438 -------GEWSYHRDYRETQITKLL-----KKNKESQLALGQ-------KPMTADDVLQYGADKVIIATGARWNTDGTNC 498 (729)
T ss_dssp -------GGGHHHHHHHHHHHHHHH-----HHSTTCEEECSC-------CCCCHHHHHTSCCSEEEECCCEEECSSCCCT
T ss_pred -------HHHHHHHHHHHHHHHHhh-----cccCCceEEEeC-------eEEehhhccccCCCEEEEcCCCCcccccccC
Confidence 122333333222222110 011124554322 22333 34467899999999988
Q ss_pred CCCCCCCCCC----ceecchhhhcCCC-CCCeEEEEc--CcHHHHHHHHHHHhCCCeEEEEeecCccCCC--CCHHHHHH
Q 008841 221 PFIPDIPGSE----YAIDSDAALDLPS-KPEKIAIVG--GGYIALEFAGIFSGLTSEVHVFIRQKKVLRG--FDEDIRDF 291 (551)
Q Consensus 221 p~~p~i~g~~----~~~~~~~~~~~~~-~~~~vvViG--~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~--~~~~~~~~ 291 (551)
|..|++||.+ .+++..+++.... .+++|+||| +|++|+|+|..|++.|.+|+++++.+ +++. ++.. ...
T Consensus 499 p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~ 576 (729)
T 1o94_A 499 LTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPN 576 (729)
T ss_dssp TTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHH
T ss_pred ccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHH
Confidence 5677899876 5778777766443 467999999 99999999999999999999999988 5542 2322 467
Q ss_pred HHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE--CCC-eE------------------EEeeEEEEecCcCCCCCCCCc
Q 008841 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT--NKG-TV------------------DGFSHVMFATGRRPNTKNLGL 350 (551)
Q Consensus 292 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~--~~G-~~------------------i~~d~vi~a~G~~p~~~~l~l 350 (551)
+.+.|++.||++++++.+++|..+ + +.+.. .++ ++ +++|.||+|+|..|++++ +
T Consensus 577 ~~~~l~~~GV~i~~~~~v~~i~~~--~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l--~ 651 (729)
T 1o94_A 577 MMRRLHELHVEELGDHFCSRIEPG--R-MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTL--W 651 (729)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETT--E-EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHH--H
T ss_pred HHHHHHhCCCEEEcCcEEEEEECC--e-EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHH--H
Confidence 788899999999999999999743 3 44432 233 22 899999999999999886 3
Q ss_pred cccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCC
Q 008841 351 EKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQA 406 (551)
Q Consensus 351 ~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 406 (551)
+..+ ..+|++++|++|+|||+|||+. +..+..|+.||+.+|.+|.+.
T Consensus 652 ~~l~--------~~vd~~~~t~~~~VyAiGD~~~-~~~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 652 NELK--------ARESEWAENDIKGIYLIGDAEA-PRLIADATFTGHRVAREIEEA 698 (729)
T ss_dssp HHHH--------HTGGGTGGGTCCEEEECGGGTS-CCCHHHHHHHHHHHHHTTTSS
T ss_pred HHHh--------hhcccccccCCCCeEEEeCccc-hhhHHHHHHHHHHHHHHhhhh
Confidence 3321 1368899999999999999997 567788999999999999863
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=1e-30 Score=288.40 Aligned_cols=268 Identities=15% Similarity=0.208 Sum_probs=202.4
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCC
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGF 147 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 147 (551)
++...+||+|||||+||++||+.|++.|++|+|||+ ...+||+|....+.|.
T Consensus 387 ~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~---------~~~~GG~~~~~~~~p~------------------- 438 (690)
T 3k30_A 387 AKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEA---------GRDLGGRVTQESALPG------------------- 438 (690)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECS---------SSSSCTHHHHHHTSTT-------------------
T ss_pred cccccceEEEECCCHHHHHHHHHHHHCCCeEEEEec---------CCCCCCEeeeccCCCc-------------------
Confidence 345578999999999999999999999999999993 4568888754333331
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEeEEEEecCCEEEE-cCEEEEeCeEEEcCCCC-----
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINA-GITLIEGRGKIVDPHTVDV-DGKLYSARHILISVGGR----- 220 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~i~~~~v~v-~g~~~~~d~lviAtG~~----- 220 (551)
..++..+..+ ....+.+. +++++.++ .+.. +.+.+.||+||+|||+.
T Consensus 439 --------~~~~~~~~~~-----------~~~~~~~~~gv~~~~~~-------~v~~~~~~~~~~d~lvlAtG~~~~~~~ 492 (690)
T 3k30_A 439 --------LSAWGRVKEY-----------REAVLAELPNVEIYRES-------PMTGDDIVEFGFEHVITATGATWRTDG 492 (690)
T ss_dssp --------CGGGGHHHHH-----------HHHHHHTCTTEEEESSC-------CCCHHHHHHTTCCEEEECCCEEECSSC
T ss_pred --------hhHHHHHHHH-----------HHHHHHHcCCCEEEECC-------eecHHHHhhcCCCEEEEcCCCcccccc
Confidence 1122332222 22344554 78877653 1222 33467899999999998
Q ss_pred ---CCCCCCCCCC--ceecchhhhcCC-CCCCeEEEEc--CcHHHHHHHHHHHhCCCeEEEEeecCccCCCC-CHHHHHH
Q 008841 221 ---PFIPDIPGSE--YAIDSDAALDLP-SKPEKIAIVG--GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGF-DEDIRDF 291 (551)
Q Consensus 221 ---p~~p~i~g~~--~~~~~~~~~~~~-~~~~~vvViG--~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~-~~~~~~~ 291 (551)
|..|++||.+ .+++..+++... ..+++++||| +|.+|+|+|..|.+.|.+|+++++.+.+++.. ++.....
T Consensus 493 ~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~ 572 (690)
T 3k30_A 493 VARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNR 572 (690)
T ss_dssp CSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHH
T ss_pred ccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHH
Confidence 4577888875 467777776643 3467899999 99999999999999999999999998877653 3566788
Q ss_pred HHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE---CCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCC
Q 008841 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT---NKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY 368 (551)
Q Consensus 292 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~---~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~ 368 (551)
+.+.+++.||+++++++|++++.++ ..+.. .+++++++|.||+|+|++|++.+ ++..+. .+.
T Consensus 573 l~~~l~~~GV~i~~~~~V~~i~~~~---~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l--~~~l~~----~~~------ 637 (690)
T 3k30_A 573 IQRRLIENGVARVTDHAVVAVGAGG---VTVRDTYASIERELECDAVVMVTARLPREEL--YLDLVA----RRD------ 637 (690)
T ss_dssp HHHHHHHTTCEEEESEEEEEEETTE---EEEEETTTCCEEEEECSEEEEESCEEECCHH--HHHHHH----HHH------
T ss_pred HHHHHHHCCCEEEcCcEEEEEECCe---EEEEEccCCeEEEEECCEEEECCCCCCChHH--HHHHhh----hhc------
Confidence 8999999999999999999997532 44443 35568999999999999999886 333221 111
Q ss_pred CCCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcCC
Q 008841 369 SGTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQA 406 (551)
Q Consensus 369 ~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 406 (551)
+|+.|+|||+|||+.. +....|+.||+.+|.||.+.
T Consensus 638 -~t~~~~VyaiGD~~~~-~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 638 -AGEIASVRGIGDAWAP-GTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp -HTSCSEEEECGGGTSC-BCHHHHHHHHHHHHHHTTCC
T ss_pred -ccCCCCEEEEeCCCch-hhHHHHHHHHHHHHHHHHhh
Confidence 7899999999999985 45667999999999999864
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=3.5e-29 Score=284.51 Aligned_cols=271 Identities=18% Similarity=0.154 Sum_probs=197.7
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.++||+|||||+||++||..|++.|++|+|||+ ...+||+|.+ | |+. .
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~---------~~~~GG~~~~--~-~k~--------------------~ 174 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDE---------RAEAGGTLLD--T-AGE--------------------Q 174 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSSGGGGG--S-SCC--------------------E
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeC---------CCCCCceecc--C-Ccc--------------------c
Confidence 468999999999999999999999999999993 4568888872 2 210 0
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHh-CCeEEEEeE-EEEecCC-EE----------EE---------cCEEE
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILIN-AGITLIEGR-GKIVDPH-TV----------DV---------DGKLY 208 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~-~~~i~~~-~v----------~v---------~g~~~ 208 (551)
+.+. ...++. ....+.+.+ .+++++.+. +..++.. .+ .+ ++..+
T Consensus 175 i~~~---~~~~~~-----------~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i 240 (965)
T 2gag_A 175 IDGM---DSSAWI-----------EQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHI 240 (965)
T ss_dssp ETTE---EHHHHH-----------HHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEE
T ss_pred cCCC---CHHHHH-----------HHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEE
Confidence 0000 001111 111222334 378887653 3333321 11 00 11368
Q ss_pred EeCeEEEcCCCCCCCCCCCCCC--ceecchhh---hc-CCC-CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC
Q 008841 209 SARHILISVGGRPFIPDIPGSE--YAIDSDAA---LD-LPS-KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL 281 (551)
Q Consensus 209 ~~d~lviAtG~~p~~p~i~g~~--~~~~~~~~---~~-~~~-~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l 281 (551)
.||+||||||+.|+.|++||.+ .+++..++ +. ... .+++++|||+|++|+|+|..|.+.|.+|+++++.+.++
T Consensus 241 ~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 241 RAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp EEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred ECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 9999999999999999999865 35554332 32 222 24899999999999999999999999999999988764
Q ss_pred CCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEc-CCceEEEEECC-------C--eEEEeeEEEEecCcCCCCCCCCcc
Q 008841 282 RGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKS-TDGSLSVKTNK-------G--TVDGFSHVMFATGRRPNTKNLGLE 351 (551)
Q Consensus 282 ~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~V~~~~-------G--~~i~~d~vi~a~G~~p~~~~l~l~ 351 (551)
+ . .+.+++.||++++++.|+++..+ +++...|++.+ | +++++|.|++|+|++|++++ +.
T Consensus 321 ~----~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l--~~ 389 (965)
T 2gag_A 321 A----A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHL--HS 389 (965)
T ss_dssp H----H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHH--HH
T ss_pred h----h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHH--HH
Confidence 3 1 56788999999999999999874 33323455543 5 57999999999999999986 32
Q ss_pred ccCeeecCCCCeEeCCCCC-----CCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcC
Q 008841 352 KVGVKMTKNGAIEVDEYSG-----TAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 352 ~~gl~~~~~G~i~vd~~~~-----t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g 405 (551)
. ..|+|.+|++++ |+.|+|||+|||++.+.+. .|..||++||.+|++
T Consensus 390 ~------~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~-~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 390 Q------RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTA-SALSTGAATGAAAAT 441 (965)
T ss_dssp H------TTCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHH-HHHHHHHHHHHHHHH
T ss_pred h------CCCcEEEcCcccccccCCCCCCEEEEEecCCchhHH-HHHHHHHHHHHHHHH
Confidence 2 246799999887 8999999999999977654 899999999999874
No 86
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=1.5e-28 Score=259.45 Aligned_cols=220 Identities=18% Similarity=0.233 Sum_probs=151.4
Q ss_pred HHHHhCCeEEEEeE-EEEecC----C-----EEEE-cCE----EEEeCeEEEcCCCCCCCCC-CCCCC---ceecchhhh
Q 008841 179 NILINAGITLIEGR-GKIVDP----H-----TVDV-DGK----LYSARHILISVGGRPFIPD-IPGSE---YAIDSDAAL 239 (551)
Q Consensus 179 ~~~~~~~v~~~~~~-~~~i~~----~-----~v~v-~g~----~~~~d~lviAtG~~p~~p~-i~g~~---~~~~~~~~~ 239 (551)
...++.++++..+. +..++. . .+.+ ++. ++.||+||+|||+.|.+|+ +++.. .+++..+..
T Consensus 135 ~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~ 214 (463)
T 3s5w_A 135 WVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYL 214 (463)
T ss_dssp HHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHH
T ss_pred HHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHH
Confidence 33445566666653 444432 1 3333 443 7999999999999988876 33321 334333322
Q ss_pred c-CCC------CCCeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccCCCC--------------------CHHHHH
Q 008841 240 D-LPS------KPEKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVLRGF--------------------DEDIRD 290 (551)
Q Consensus 240 ~-~~~------~~~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l~~~--------------------~~~~~~ 290 (551)
. +.. .+++|+|||+|.+|+|+|..|.+. +.+|++++|.+.+++.. +++...
T Consensus 215 ~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~ 294 (463)
T 3s5w_A 215 EHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERE 294 (463)
T ss_dssp HHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHH
T ss_pred hhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHH
Confidence 2 222 478999999999999999999998 89999999998775521 222222
Q ss_pred HHHHHHHh--------------------------cCcEEEcCcccEEEEEcCCceEEEEEC---CCe--EEEeeEEEEec
Q 008841 291 FVAEQMSL--------------------------RGIEFHTEESPQAILKSTDGSLSVKTN---KGT--VDGFSHVMFAT 339 (551)
Q Consensus 291 ~l~~~l~~--------------------------~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G~--~i~~d~vi~a~ 339 (551)
.+.+.+.. .||++++++.|++++.++++ +.|.+. +|+ ++++|.||+||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~-~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 295 RLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG-IELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp HHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE-EEEEEEETTTCCEEEEEESEEEECC
T ss_pred HHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE-EEEEEEEcCCCCeEEEECCEEEEee
Confidence 23332222 59999999999999887665 667765 665 49999999999
Q ss_pred CcCCC--CCCCCccccCeeecCCCCeEeCCCCCCC-----CCcEEEeCcCCCC-----CCChHHHHHhHHHHHHHHc
Q 008841 340 GRRPN--TKNLGLEKVGVKMTKNGAIEVDEYSGTA-----VPSIWAVGDVTDR-----INLTPVALMEGGALAKTLF 404 (551)
Q Consensus 340 G~~p~--~~~l~l~~~gl~~~~~G~i~vd~~~~t~-----~~~vya~GD~~~~-----~~~~~~A~~~g~~aa~~i~ 404 (551)
|++|+ ..+ +......+ |++.||+++++. .|+|||+|||... +.+...|.+++++++.++-
T Consensus 374 G~~p~~~~~~--l~~l~~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 374 GYERQLHRQL--LEPLAEYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp CEECCC-CTT--TGGGGGGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred CCCCCCccch--hHHHHHHh---CCcccCcccccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 99999 555 33333222 789999999863 4679999999852 4566789999999877654
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.4e-28 Score=270.54 Aligned_cols=257 Identities=20% Similarity=0.271 Sum_probs=193.2
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
....+||+|||||+||++||..|++.|++|+|||+ ...+||++...+++|.+
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~---------~~~~gg~~~~~~~~~~~------------------- 421 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDA---------HSEIGGQFNIAKQIPGK------------------- 421 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEES---------SSSSCTTHHHHTTSTTC-------------------
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeC---------CCCCCCeeeccccCCCH-------------------
Confidence 34468999999999999999999999999999993 45678876543333310
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEE-EeCeEEEcCCCCCCCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLY-SARHILISVGGRPFIPDIP 227 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~-~~d~lviAtG~~p~~p~i~ 227 (551)
.++..+. ..+...+++.+++++.++... ...+ .||+||+|||++|+.|++|
T Consensus 422 --------~~~~~~~-----------~~~~~~~~~~gv~~~~~~~v~---------~~~~~~~d~lviAtG~~p~~~~i~ 473 (671)
T 1ps9_A 422 --------EEFYETL-----------RYYRRMIEVTGVTLKLNHTVT---------ADQLQAFDETILASGIVPRTPPID 473 (671)
T ss_dssp --------TTHHHHH-----------HHHHHHHHHHTCEEEESCCCC---------SSSSCCSSEEEECCCEEECCCCCB
T ss_pred --------HHHHHHH-----------HHHHHHHHHcCCEEEeCcEec---------HHHhhcCCEEEEccCCCcCCCCCC
Confidence 1122111 123344556689988864211 1124 8999999999999999999
Q ss_pred CCC--ceecchhhhcCC-CCCCeEEEEcCcHHHHHHHHHHHhCCC-----------------------------------
Q 008841 228 GSE--YAIDSDAALDLP-SKPEKIAIVGGGYIALEFAGIFSGLTS----------------------------------- 269 (551)
Q Consensus 228 g~~--~~~~~~~~~~~~-~~~~~vvViG~G~~g~e~a~~l~~~g~----------------------------------- 269 (551)
|.+ .+++..+.+... ..+++|+|||+|++|+|+|..|++.|.
T Consensus 474 G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 553 (671)
T 1ps9_A 474 GIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRS 553 (671)
T ss_dssp TTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCC
T ss_pred CCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCC
Confidence 975 367776666543 357899999999999999999998773
Q ss_pred --eEEEEeecCccCCC-CCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCC
Q 008841 270 --EVHVFIRQKKVLRG-FDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPN 344 (551)
Q Consensus 270 --~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~ 344 (551)
+|+++++.+..+.. +++.....+.+.|++.||+++++++|++++. ++ +.+. .+| +++++|.||+|+|++|+
T Consensus 554 ~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 554 PRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG-LHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp SSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET--TE-EEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred CcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-EEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 56677776655543 6777788888999999999999999999973 33 4444 577 57999999999999999
Q ss_pred CCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCCC-CChHHHHHhHHHHHHHH
Q 008841 345 TKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRI-NLTPVALMEGGALAKTL 403 (551)
Q Consensus 345 ~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~~-~~~~~A~~~g~~aa~~i 403 (551)
++++ +. ++. ..++||++|||+... ..+..|++||..+|.||
T Consensus 630 ~~l~--~~----l~~------------~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 630 RALA--QP----LID------------SGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp CTTH--HH----HHT------------TTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred HHHH--HH----HHh------------cCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 9863 22 111 226899999999864 46889999999999986
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=2.2e-27 Score=253.55 Aligned_cols=297 Identities=18% Similarity=0.293 Sum_probs=192.7
Q ss_pred CccEEEECCChHHHHHHHHHH-hCCCcEEEEccCCCCCCCCCCCCCCCeeccC---CC---cchHHHHHhhhhhhHhhhc
Q 008841 72 DFDLFTIGAGSGGVRASRFAA-NFGASVAICELPFSTISSETTGGVGGTCVLR---GC---VPKKLLVYASKFSHEFDES 144 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~-~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~---g~---~p~~~l~~~~~~~~~~~~~ 144 (551)
++||+|||||++|+++|..|+ +.|++|+|||+ ...+||+|... || +|++.+... +.....
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~---------~~~~GGtw~~~~ypg~~~d~~s~~~~~~--~~~~~~-- 74 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDK---------ADGPGGTWYWNRYPGALSDTESHLYRFS--FDRDLL-- 74 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEES---------SSSSCTHHHHCCCTTCEEEEEGGGSSCC--SCHHHH--
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEEC---------CCCCCCcccccCCCCceecCCcceeeec--cccccc--
Confidence 589999999999999999999 89999999993 56789998643 44 443222111 000000
Q ss_pred cCCCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCe--EEEEe-EEEEe--cCC----EEEE-cCEEEEeCeEE
Q 008841 145 NGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGI--TLIEG-RGKIV--DPH----TVDV-DGKLYSARHIL 214 (551)
Q Consensus 145 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~i--~~~----~v~v-~g~~~~~d~lv 214 (551)
..+.|.. ...+..++. ..+....++.++ .+..+ ++..+ +.. .+.+ +++++.||+||
T Consensus 75 ~~~~~~~---~~~~~~ei~-----------~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV 140 (540)
T 3gwf_A 75 QESTWKT---TYITQPEIL-----------EYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVV 140 (540)
T ss_dssp HHCCCSB---SEEEHHHHH-----------HHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEE
T ss_pred cCCCCcc---cCCCHHHHH-----------HHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEE
Confidence 0111110 011222222 222333444455 34333 23322 222 4445 67789999999
Q ss_pred EcCC--CCCCCCCCCCCCc-----eecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc-cCCCCCH
Q 008841 215 ISVG--GRPFIPDIPGSEY-----AIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK-VLRGFDE 286 (551)
Q Consensus 215 iAtG--~~p~~p~i~g~~~-----~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~-~l~~~~~ 286 (551)
+||| ++|..|++||.+. +++..........+++|+|||+|.+|+|+|..|++.+.+|++++|.+. +++.+++
T Consensus 141 ~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~ 220 (540)
T 3gwf_A 141 NAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNR 220 (540)
T ss_dssp ECCCSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCC
T ss_pred ECCcccccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccC
Confidence 9999 7899999999763 334333334555689999999999999999999999999999999987 3444433
Q ss_pred HHHHHHHHHHH---------------------------------------------------------------------
Q 008841 287 DIRDFVAEQMS--------------------------------------------------------------------- 297 (551)
Q Consensus 287 ~~~~~l~~~l~--------------------------------------------------------------------- 297 (551)
++...+++.++
T Consensus 221 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 300 (540)
T 3gwf_A 221 PVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAA 300 (540)
T ss_dssp BCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHH
T ss_pred CCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHH
Confidence 32222221111
Q ss_pred -----------------------------------------hcCcEEEc--CcccEEEEEcCCceEEEEECCCeEEEeeE
Q 008841 298 -----------------------------------------LRGIEFHT--EESPQAILKSTDGSLSVKTNKGTVDGFSH 334 (551)
Q Consensus 298 -----------------------------------------~~Gv~i~~--~~~v~~i~~~~~~~~~V~~~~G~~i~~d~ 334 (551)
+.+|+++. +..|++|.. ++ |.+.||+++++|.
T Consensus 301 ~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~--~g---v~~~dG~~~~~Dv 375 (540)
T 3gwf_A 301 SFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA--KG---VVTEDGVLHELDV 375 (540)
T ss_dssp HHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS--SE---EEETTCCEEECSE
T ss_pred HHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec--Ce---EEcCCCCEEECCE
Confidence 34778874 568888854 33 8899999999999
Q ss_pred EEEecCcCCCCCCCCccccCeeecCCCCeEeCC--------C--CC-CCCCcEEEe-CcCCCCCCChHHHHHhHHHHHHH
Q 008841 335 VMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDE--------Y--SG-TAVPSIWAV-GDVTDRINLTPVALMEGGALAKT 402 (551)
Q Consensus 335 vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~--------~--~~-t~~~~vya~-GD~~~~~~~~~~A~~~g~~aa~~ 402 (551)
||+|||+.+++.+ +.. +++..++++.+++ + +. .+.||+|++ |..+........+..|++++++.
T Consensus 376 IV~ATGf~~~~~~--~~~--~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~ 451 (540)
T 3gwf_A 376 LVFATGFDAVDGN--YRR--IEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDT 451 (540)
T ss_dssp EEECCCBSCSSHH--HHT--SEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHH
T ss_pred EEECCccCccccC--cCc--ceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999998743 222 2332223344442 2 22 278999999 87765334455678899999887
Q ss_pred Hc
Q 008841 403 LF 404 (551)
Q Consensus 403 i~ 404 (551)
|-
T Consensus 452 i~ 453 (540)
T 3gwf_A 452 IG 453 (540)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 89
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.95 E-value=1.7e-27 Score=252.64 Aligned_cols=249 Identities=19% Similarity=0.251 Sum_probs=182.4
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWK 150 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 150 (551)
.++||+|||||++|+++|.+|++. ++|+|||+ ...+||.+...... .+++.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~---------~~~~GG~~~~~~~~-------------------~~g~~ 157 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEE---------RGWLGGDMWLKGIK-------------------QEGFN 157 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECT---------TSSSSCSGGGTCSE-------------------ETTTT
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeC---------CCCCCCeeeccccc-------------------cCCCC
Confidence 357999999999999999999999 99999993 44577776531100 01110
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEec--CCEEEE----cCE--EEEeCeEEEcCCCCC
Q 008841 151 YGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIVD--PHTVDV----DGK--LYSARHILISVGGRP 221 (551)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i~--~~~v~v----~g~--~~~~d~lviAtG~~p 221 (551)
. ...++. ..+.+.+ +.+++++.+. +..++ ...+.+ +++ .+.||++|+|||+.|
T Consensus 158 -----~-~~~~~~-----------~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 158 -----K-DSRKVV-----------EELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp -----E-EHHHHH-----------HHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred -----C-CHHHHH-----------HHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 0 111111 1111122 4578776543 22222 222221 343 689999999999999
Q ss_pred CCCCCCCCC--ceecchhhhcC----C-CCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHH
Q 008841 222 FIPDIPGSE--YAIDSDAALDL----P-SKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAE 294 (551)
Q Consensus 222 ~~p~i~g~~--~~~~~~~~~~~----~-~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~ 294 (551)
+.|++||.+ .+++.+++..+ . ..+++++|+|+|++|+| +
T Consensus 220 ~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle----------------------------------~ 265 (493)
T 1y56_A 220 STMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI----------------------------------Q 265 (493)
T ss_dssp CCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH----------------------------------H
T ss_pred cCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH----------------------------------H
Confidence 999999865 35655554421 1 23589999999999988 4
Q ss_pred HHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeee--cCCCCeE-eCCCCCC
Q 008841 295 QMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKM--TKNGAIE-VDEYSGT 371 (551)
Q Consensus 295 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~--~~~G~i~-vd~~~~t 371 (551)
.+++.||++++++.|+++..+++ ...+.+.+|+++++|.||+|+|.+|+.++ ++..|+++ +++|+|. ||++++
T Consensus 266 ~l~~~GV~v~~~~~v~~i~~~~~-v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l--~~~~g~~~~~~~~g~i~~vd~~~~- 341 (493)
T 1y56_A 266 ELERWGIDYVHIPNVKRVEGNEK-VERVIDMNNHEYKVDALIFADGRRPDINP--ITQAGGKLRFRRGYYSPVLDEYHR- 341 (493)
T ss_dssp HHHHHTCEEEECSSEEEEECSSS-CCEEEETTCCEEECSEEEECCCEEECCHH--HHHTTCCEEEETTEEEECCCTTSE-
T ss_pred HHHhCCcEEEeCCeeEEEecCCc-eEEEEeCCCeEEEeCEEEECCCcCcCchH--HHhcCCCccccCCceeeccccccC-
Confidence 56788999999999999986543 35677888989999999999999999987 56667654 5778887 899999
Q ss_pred CCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcC
Q 008841 372 AVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 372 ~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g 405 (551)
+.|+|||+|||++. .++..|..||+++|.||.+
T Consensus 342 s~~~vya~GD~~~~-~~~~~A~~~g~~aa~~i~~ 374 (493)
T 1y56_A 342 IKDGIYVAGSAVSI-KPHYANYLEGKLVGAYILK 374 (493)
T ss_dssp EETTEEECSTTTCC-CCHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeccCCc-cCHHHHHHHHHHHHHHHHH
Confidence 99999999999985 5788999999999999986
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=1.1e-25 Score=240.70 Aligned_cols=299 Identities=17% Similarity=0.201 Sum_probs=183.1
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhh-Hhh--hccCCC
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSH-EFD--ESNGFG 148 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~-~~~--~~~~~g 148 (551)
++||||||||++|+++|..|++.|++|+|||+ ...+||+|. ..|.|............ .+. ....+.
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~---------~~~~GGtw~-~~~yPg~~~d~~~~~y~~~f~~~~~~~~~ 78 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEA---------GEDVGGTWY-WNRYPGCRLDTESYAYGYFALKGIIPEWE 78 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTHHH-HCCCTTCBCSSCHHHHCHHHHTTSSTTCC
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCccc-cCCCCceeecCchhhcccccCcccccCCC
Confidence 58999999999999999999999999999993 567899984 33444211000000000 000 001111
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCe--EEEEe-EEEE---ecC-C--EEEE-cCEEEEeCeEEEcCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGI--TLIEG-RGKI---VDP-H--TVDV-DGKLYSARHILISVG 218 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~---i~~-~--~v~v-~g~~~~~d~lviAtG 218 (551)
|.. ...+..++..+.. ...++.++ .+..+ ++.. .+. . .+.+ +++++.||+||+|||
T Consensus 79 ~~~---~~~~~~ei~~yl~-----------~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG 144 (545)
T 3uox_A 79 WSE---NFASQPEMLRYVN-----------RAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATG 144 (545)
T ss_dssp CSB---SSCBHHHHHHHHH-----------HHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCC
T ss_pred ccc---cCCCHHHHHHHHH-----------HHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 211 1122233332222 22222233 22211 2222 222 2 4555 778999999999999
Q ss_pred --CCCCCCCCCCCCc-----eecchhhhc-------CCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc-CCC
Q 008841 219 --GRPFIPDIPGSEY-----AIDSDAALD-------LPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV-LRG 283 (551)
Q Consensus 219 --~~p~~p~i~g~~~-----~~~~~~~~~-------~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~-l~~ 283 (551)
++|..|++||.+. +++...... ....+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+ ++.
T Consensus 145 ~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~ 224 (545)
T 3uox_A 145 PLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPL 224 (545)
T ss_dssp SCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEEC
T ss_pred CCCCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccC
Confidence 8999999999763 334333333 4446899999999999999999999999999999999874 333
Q ss_pred CCH----HHHHHH-------------------------------------------------------------------
Q 008841 284 FDE----DIRDFV------------------------------------------------------------------- 292 (551)
Q Consensus 284 ~~~----~~~~~l------------------------------------------------------------------- 292 (551)
.++ ...+.+
T Consensus 225 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (545)
T 3uox_A 225 GNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKF 304 (545)
T ss_dssp CCCBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHH
T ss_pred CcCCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHH
Confidence 222 111111
Q ss_pred ----------------------------------------HHHHHhcCcEEEc--CcccEEEEEcCCceEEEEECCCeEE
Q 008841 293 ----------------------------------------AEQMSLRGIEFHT--EESPQAILKSTDGSLSVKTNKGTVD 330 (551)
Q Consensus 293 ----------------------------------------~~~l~~~Gv~i~~--~~~v~~i~~~~~~~~~V~~~~G~~i 330 (551)
.+.|.+.+|+++. ++.|++|.. ++ |.+.|| ++
T Consensus 305 ~~~~~~~~~~~~v~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~--~g---v~~~dG-~~ 378 (545)
T 3uox_A 305 LADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTP--EG---IKTADA-AY 378 (545)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEET--TE---EEESSC-EE
T ss_pred HHHHHHHHHHHHcCCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEcc--Ce---EEeCCC-ee
Confidence 1112223777775 668888854 33 788999 89
Q ss_pred EeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCC--------C---CCCCCcEEEeCcCCCC---CCChHHHHHhH
Q 008841 331 GFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY--------S---GTAVPSIWAVGDVTDR---INLTPVALMEG 396 (551)
Q Consensus 331 ~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~--------~---~t~~~~vya~GD~~~~---~~~~~~A~~~g 396 (551)
++|.||+|||+.+++.++ . ++++..++++.+++. + -.+.||+|.+.--... ......+..|+
T Consensus 379 ~~D~IV~ATGf~~~~~~~--~--~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~ 454 (545)
T 3uox_A 379 DLDVIIYATGFDAVTGSL--D--RIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQA 454 (545)
T ss_dssp ECSEEEECCCCBSSSCSC--T--TSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHH
T ss_pred ecCEEEECCccccccccC--C--CceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHH
Confidence 999999999999987653 2 333433334444422 1 2378999998433221 23445677899
Q ss_pred HHHHHHHc
Q 008841 397 GALAKTLF 404 (551)
Q Consensus 397 ~~aa~~i~ 404 (551)
+++++.|-
T Consensus 455 ~~i~~~i~ 462 (545)
T 3uox_A 455 EWVLRMIS 462 (545)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988774
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=5.1e-25 Score=235.71 Aligned_cols=297 Identities=19% Similarity=0.290 Sum_probs=185.6
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeecc---CCC---cchHHHHHhhhhhhHhhhc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVL---RGC---VPKKLLVYASKFSHEFDES 144 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~---~g~---~p~~~l~~~~~~~~~~~~~ 144 (551)
.++||+|||||++|+++|..|++.|++|+|||+ ...+||+|.. .|| +|++.+... +...+ .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~---------~~~~GGtw~~~~ypg~~~dv~s~~y~~~--f~~~~--~ 86 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEA---------ASGVGGVWYWNRYPGARCDVESIDYSYS--FSPEL--E 86 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTHHHHCCCTTCBCSSCTTTSSCC--SCHHH--H
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCccccCCCCCceeCCCchhcccc--ccccc--c
Confidence 468999999999999999999999999999993 5678999963 254 443322111 00000 0
Q ss_pred cCCCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCe--EEEEe-EEEEe--cCC----EEEE-cCEEEEeCeEE
Q 008841 145 NGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGI--TLIEG-RGKIV--DPH----TVDV-DGKLYSARHIL 214 (551)
Q Consensus 145 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~i--~~~----~v~v-~g~~~~~d~lv 214 (551)
..+.|. ....+..++..+ +....++.++ .+..+ ++..+ +.. .+.+ +++++.||+||
T Consensus 87 ~~~~~~---~~~~~~~ei~~y-----------l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV 152 (549)
T 4ap3_A 87 QEWNWS---EKYATQPEILAY-----------LEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLV 152 (549)
T ss_dssp HHCCCS---SSSCBHHHHHHH-----------HHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEE
T ss_pred cCCCCc---cCCCCHHHHHHH-----------HHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEE
Confidence 011111 111222232222 2233444454 33322 23322 222 4555 67789999999
Q ss_pred EcCC--CCCCCCCCCCCCc-----eecchhh-hcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc-CCCCC
Q 008841 215 ISVG--GRPFIPDIPGSEY-----AIDSDAA-LDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV-LRGFD 285 (551)
Q Consensus 215 iAtG--~~p~~p~i~g~~~-----~~~~~~~-~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~-l~~~~ 285 (551)
+||| ++|..|++||.+. +++.... ......+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+ ++..+
T Consensus 153 ~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~ 232 (549)
T 4ap3_A 153 VAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGN 232 (549)
T ss_dssp ECCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC-
T ss_pred ECcCCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcC
Confidence 9999 8999999999763 2332222 123345899999999999999999999999999999999874 33333
Q ss_pred HHHHHHHHHH----------------------------------------------------------------------
Q 008841 286 EDIRDFVAEQ---------------------------------------------------------------------- 295 (551)
Q Consensus 286 ~~~~~~l~~~---------------------------------------------------------------------- 295 (551)
+++...+.+.
T Consensus 233 ~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (549)
T 4ap3_A 233 VPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARA 312 (549)
T ss_dssp ---CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHH
Confidence 3222111111
Q ss_pred ----------------------------------------HHhcCcEEE--cCcccEEEEEcCCceEEEEECCCeEEEee
Q 008841 296 ----------------------------------------MSLRGIEFH--TEESPQAILKSTDGSLSVKTNKGTVDGFS 333 (551)
Q Consensus 296 ----------------------------------------l~~~Gv~i~--~~~~v~~i~~~~~~~~~V~~~~G~~i~~d 333 (551)
+.+.+|+++ ....|++|.. ++ |.+.|| ++++|
T Consensus 313 ~~~~~~~~~v~d~~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~--~g---v~~~dG-~~~~D 386 (549)
T 4ap3_A 313 FWEEKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDE--TG---IVTTGA-HYDLD 386 (549)
T ss_dssp HHHHHHHHHCSCHHHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEET--TE---EEESSC-EEECS
T ss_pred HHHHHHHHHcCCHHHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeC--Cc---EEeCCC-ceecC
Confidence 112377777 2457888864 33 788999 89999
Q ss_pred EEEEecCcCCCCCCCCccccCeeecCCCCeEeCCC--------CC---CCCCcEEEe-CcCCC--CCCChHHHHHhHHHH
Q 008841 334 HVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEY--------SG---TAVPSIWAV-GDVTD--RINLTPVALMEGGAL 399 (551)
Q Consensus 334 ~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~--------~~---t~~~~vya~-GD~~~--~~~~~~~A~~~g~~a 399 (551)
.||+|||+.+++.+ +.. +.+..++++.+++. +- .+.||+|.+ |-.+. .......+..|++++
T Consensus 387 ~iI~ATGf~~~~~~--~~~--~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i 462 (549)
T 4ap3_A 387 MIVLATGFDAMTGS--LDK--LEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWV 462 (549)
T ss_dssp EEEECCCEEESSTT--GGG--SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHH
T ss_pred EEEECCcccccccc--cCc--eeEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHH
Confidence 99999999998754 222 33333344555532 21 278999997 33222 123345677889988
Q ss_pred HHHHc
Q 008841 400 AKTLF 404 (551)
Q Consensus 400 a~~i~ 404 (551)
++.|-
T Consensus 463 ~~~i~ 467 (549)
T 4ap3_A 463 ADAIA 467 (549)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.91 E-value=2.1e-24 Score=231.67 Aligned_cols=301 Identities=17% Similarity=0.244 Sum_probs=182.6
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhH---hhhccCC
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHE---FDESNGF 147 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~---~~~~~~~ 147 (551)
.++||+|||||++|+++|..|++.|++|+|||+ ...+||+|.. .|.|...+......... ......+
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~---------~~~~GG~w~~-~~~pg~~~d~~~~~~~~~f~~~~~~~~ 84 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIET---------AGDVGGVWYW-NRYPGARCDIESIEYCYSFSEEVLQEW 84 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTHHHH-CCCTTCBCSSCTTTSSCCSCHHHHHHC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCcccc-cCCCceeecccccccccccChhhhhcc
Confidence 368999999999999999999999999999993 5678999852 34443111000000000 0000001
Q ss_pred CcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCC--eEEEEe-EEE---EecC---CEEEE-cCEEEEeCeEEEcC
Q 008841 148 GWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAG--ITLIEG-RGK---IVDP---HTVDV-DGKLYSARHILISV 217 (551)
Q Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~-~~~---~i~~---~~v~v-~g~~~~~d~lviAt 217 (551)
.|. ....+..++..+.. ...++.+ ..+..+ ++. ..+. ..+.+ +++++.+|+||+||
T Consensus 85 ~~~---~~~~~~~~i~~yl~-----------~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~At 150 (542)
T 1w4x_A 85 NWT---ERYASQPEILRYIN-----------FVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMAS 150 (542)
T ss_dssp CCC---BSSCBHHHHHHHHH-----------HHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECC
T ss_pred Ccc---cccCCHHHHHHHHH-----------HHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECc
Confidence 111 01112222222222 1222222 222222 222 2222 24444 66789999999999
Q ss_pred C--CCCCCCCCCCCCc-----eecchhhhc-CCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc-CCCC----
Q 008841 218 G--GRPFIPDIPGSEY-----AIDSDAALD-LPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV-LRGF---- 284 (551)
Q Consensus 218 G--~~p~~p~i~g~~~-----~~~~~~~~~-~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~-l~~~---- 284 (551)
| +.|..|++||.+. +++.....+ ....+++|+|||+|.+|+|++..+++.+.+|+++.|.+.+ ++..
T Consensus 151 G~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~ 230 (542)
T 1w4x_A 151 GQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPL 230 (542)
T ss_dssp CSCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBC
T ss_pred CCCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCC
Confidence 9 6789999999752 333322212 3345899999999999999999999999999999998765 2321
Q ss_pred CHHHHHH-----------------------------------------------------------------------HH
Q 008841 285 DEDIRDF-----------------------------------------------------------------------VA 293 (551)
Q Consensus 285 ~~~~~~~-----------------------------------------------------------------------l~ 293 (551)
.++..+. +.
T Consensus 231 ~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (542)
T 1w4x_A 231 DPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIR 310 (542)
T ss_dssp CHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHH
Confidence 1111100 00
Q ss_pred HH-----------------------------------HHhcCcEEE--cCcccEEEEEcCCceEEEEECCCeEEEeeEEE
Q 008841 294 EQ-----------------------------------MSLRGIEFH--TEESPQAILKSTDGSLSVKTNKGTVDGFSHVM 336 (551)
Q Consensus 294 ~~-----------------------------------l~~~Gv~i~--~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi 336 (551)
+. +.+.+|+++ .++.|+++.. ++ |.+.| +++++|.||
T Consensus 311 ~~~~~~~~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~--~g---v~~~d-~~~~~D~ii 384 (542)
T 1w4x_A 311 NKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP--RG---VRTSE-REYELDSLV 384 (542)
T ss_dssp HHHHHHCSSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS--SE---EEESS-CEEECSEEE
T ss_pred HHHHHHcCCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC--Ce---EEeCC-eEEecCEEE
Confidence 11 111346665 3557777742 33 78888 889999999
Q ss_pred EecCcCCCCCCCCccccCeeecCCCCeEeCC--------C--CC-CCCCcEEEe-CcCCC--CCCChHHHHHhHHHHHHH
Q 008841 337 FATGRRPNTKNLGLEKVGVKMTKNGAIEVDE--------Y--SG-TAVPSIWAV-GDVTD--RINLTPVALMEGGALAKT 402 (551)
Q Consensus 337 ~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~--------~--~~-t~~~~vya~-GD~~~--~~~~~~~A~~~g~~aa~~ 402 (551)
+|||+.+++.+ +...++. ..+| +.+++ + +. ...||+|++ |+.+. .......|..|+++++++
T Consensus 385 ~atG~~~~~~~--~~~~~i~-g~~G-~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~ 460 (542)
T 1w4x_A 385 LATGFDALTGA--LFKIDIR-GVGN-VALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDH 460 (542)
T ss_dssp ECCCCCCTTHH--HHTSEEE-CGGG-CBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHH
T ss_pred EcCCccccccC--cCceeeE-CCCC-CCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHH
Confidence 99999998765 3332222 2333 44443 2 22 278999998 99864 234457899999999999
Q ss_pred HcC
Q 008841 403 LFQ 405 (551)
Q Consensus 403 i~g 405 (551)
|..
T Consensus 461 i~~ 463 (542)
T 1w4x_A 461 IAY 463 (542)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.90 E-value=3.9e-23 Score=189.02 Aligned_cols=151 Identities=19% Similarity=0.301 Sum_probs=134.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC---------CC-----CHHHHHHHHHHHHhcCcEEEcCcccEEE
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR---------GF-----DEDIRDFVAEQMSLRGIEFHTEESPQAI 312 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~---------~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i 312 (551)
+++|||+|++|+++|..|++.|.+|+++++.+.++. .+ ++++.+.+.+.+++.|++++.+ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 689999999999999999999999999999876552 23 4788899999999999999999 99999
Q ss_pred EEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCCCCC-ChHH
Q 008841 313 LKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTDRIN-LTPV 391 (551)
Q Consensus 313 ~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~~~~-~~~~ 391 (551)
+.++++ +.+.+.+| ++++|.||+|+|..|+. ++..+++++ +|.|.||+++||+.|+|||+|||+..+. ++..
T Consensus 82 ~~~~~~-~~v~~~~g-~i~ad~vI~A~G~~~~~----~~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~~~~~~~~ 154 (180)
T 2ywl_A 82 RDMGGV-FEVETEEG-VEKAERLLLCTHKDPTL----PSLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGKVPGHAII 154 (180)
T ss_dssp EECSSS-EEEECSSC-EEEEEEEEECCTTCCHH----HHHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTCCSCCHHH
T ss_pred EEcCCE-EEEEECCC-EEEECEEEECCCCCCCc----cccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCcchhhHHH
Confidence 987666 77888888 79999999999999853 456678888 8999999999999999999999999865 8999
Q ss_pred HHHhHHHHHHHHcC
Q 008841 392 ALMEGGALAKTLFQ 405 (551)
Q Consensus 392 A~~~g~~aa~~i~g 405 (551)
|..||+++|.||.+
T Consensus 155 A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 155 SAGDGAYVAVHLVS 168 (180)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHH
Confidence 99999999999985
No 94
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.81 E-value=6.2e-21 Score=200.82 Aligned_cols=308 Identities=15% Similarity=0.214 Sum_probs=175.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCe--eccCCCcchHHHHHhh----------------
Q 008841 74 DLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGT--CVLRGCVPKKLLVYAS---------------- 135 (551)
Q Consensus 74 dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~--~~~~g~~p~~~l~~~~---------------- 135 (551)
||+|||||+||+++|+.|++.|.+|+||||. ..........||. +.+.+|.|.+.+....
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~--~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR--IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC--CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 7999999999999999999999999999953 1111111123333 2344566655433220
Q ss_pred -hhhhHhhhccCCCcccCCC----CCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEe--cCCEE---EE-
Q 008841 136 -KFSHEFDESNGFGWKYGTE----PQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIV--DPHTV---DV- 203 (551)
Q Consensus 136 -~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i--~~~~v---~v- 203 (551)
+....+..+..+|+.+... ....+..........-..+...+.+.+++.+++++.+. + .+ +...+ .+
T Consensus 79 ~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~ 157 (472)
T 2e5v_A 79 SEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEE
Confidence 1122233344445443210 00000000000000011222223334456789988774 5 43 34443 33
Q ss_pred -cCEEEEeCeEEEcCCCCCCCCCCCCCCceecchh----------hhcCCCC--CCeEEEEcCcHHHHHHHHHHHhCCCe
Q 008841 204 -DGKLYSARHILISVGGRPFIPDIPGSEYAIDSDA----------ALDLPSK--PEKIAIVGGGYIALEFAGIFSGLTSE 270 (551)
Q Consensus 204 -~g~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~----------~~~~~~~--~~~vvViG~G~~g~e~a~~l~~~g~~ 270 (551)
++..+.+|.||+|||+.+..++++......+.+. +.+++.. ...++++|+| +++++..++..|..
T Consensus 158 ~~~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~ 235 (472)
T 2e5v_A 158 KRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQ 235 (472)
T ss_dssp TTEEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCE
T ss_pred eCCCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCceE
Confidence 2345789999999998887665432211222222 1112211 1234455766 88888899999988
Q ss_pred EEEEeecCccCCCCCHHH--------HHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEE-eeEEEEecCc
Q 008841 271 VHVFIRQKKVLRGFDEDI--------RDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDG-FSHVMFATGR 341 (551)
Q Consensus 271 Vtlv~~~~~~l~~~~~~~--------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~-~d~vi~a~G~ 341 (551)
+ +..+.+++++.++++. ...+.+.+++.|. ++++... + + . + .+.++ .+.++++.|.
T Consensus 236 ~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~---~-~-----~--~~~~~~~~~~~~~~G~ 300 (472)
T 2e5v_A 236 I-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I---E-D-----F--ERKFPVVAKYLARHGH 300 (472)
T ss_dssp E-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C---T-T-----H--HHHCHHHHHHHHHTTC
T ss_pred E-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h---H-H-----H--HHHhHHHHHHHHHhCc
Confidence 7 7788888887665543 5666677766653 3333211 0 0 0 0 01233 4677888999
Q ss_pred CCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCCC-CC----CChHHHHHhHHHHHHHHc
Q 008841 342 RPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVTD-RI----NLTPVALMEGGALAKTLF 404 (551)
Q Consensus 342 ~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~~-~~----~~~~~A~~~g~~aa~~i~ 404 (551)
.|+ +++.... ......|+|.||+++||++|||||+|||++ .. .++..+..++.+.++++.
T Consensus 301 dp~-~~i~v~p--~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~ 365 (472)
T 2e5v_A 301 NYK-VKIPIFP--AAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLP 365 (472)
T ss_dssp CTT-SCEECEE--EEEEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGG
T ss_pred Ccc-cceEeeh--hhceeCCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHH
Confidence 999 6643222 223346899999999999999999999988 32 566777777655555543
No 95
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.79 E-value=9.7e-17 Score=170.09 Aligned_cols=199 Identities=18% Similarity=0.200 Sum_probs=122.9
Q ss_pred EEEEeCeEEEcCCCCCCCCCCCCC-Cceecchhhhc-------CCCCCCeEEEEcCcHHHHHHHHHHHhC--CCeEEEEe
Q 008841 206 KLYSARHILISVGGRPFIPDIPGS-EYAIDSDAALD-------LPSKPEKIAIVGGGYIALEFAGIFSGL--TSEVHVFI 275 (551)
Q Consensus 206 ~~~~~d~lviAtG~~p~~p~i~g~-~~~~~~~~~~~-------~~~~~~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~ 275 (551)
+++.++.||+|||..|.+|..++. ..++++.+... ....+|+|+|||+|.+|+|++..|.+. +.+|+++.
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~ 278 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIM 278 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEe
Confidence 478999999999999888875443 34554444332 223589999999999999999999764 78999999
Q ss_pred ecCccCCC---------CCHHHHHH-------------------------------HHHHH-H---------hcCcEEEc
Q 008841 276 RQKKVLRG---------FDEDIRDF-------------------------------VAEQM-S---------LRGIEFHT 305 (551)
Q Consensus 276 ~~~~~l~~---------~~~~~~~~-------------------------------l~~~l-~---------~~Gv~i~~ 305 (551)
|++.+.+. +.++..+. +.+.+ + .....+..
T Consensus 279 R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~ 358 (501)
T 4b63_A 279 RDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILP 358 (501)
T ss_dssp SSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEEC
T ss_pred CCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecC
Confidence 98765432 11111111 00000 0 01224555
Q ss_pred CcccEEEEEcCC-ceEE------------EEECCCeEEEeeEEEEecCcCCCCC--CCCccccCeeecCCCCeEeCCCCC
Q 008841 306 EESPQAILKSTD-GSLS------------VKTNKGTVDGFSHVMFATGRRPNTK--NLGLEKVGVKMTKNGAIEVDEYSG 370 (551)
Q Consensus 306 ~~~v~~i~~~~~-~~~~------------V~~~~G~~i~~d~vi~a~G~~p~~~--~l~l~~~gl~~~~~G~i~vd~~~~ 370 (551)
+..+..+..... +.+. +.+.+|+++++|.||+|||++++.. ++.. ...+..+.+|...|+.+.+
T Consensus 359 ~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~-~~~l~~d~~g~~~v~rdy~ 437 (501)
T 4b63_A 359 ERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSK-VQHLRPTGQDQWKPHRDYR 437 (501)
T ss_dssp SEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGG-GGGGSSTTCCSCCBCTTSB
T ss_pred CcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcch-hhhcCcCcCCCeeeCCCcE
Confidence 555555543322 1122 3456788999999999999998753 2211 1235556777888887654
Q ss_pred C--------CCCcEEEeCcCCC-----CCCChHHHHHhHHHHHHHHcCC
Q 008841 371 T--------AVPSIWAVGDVTD-----RINLTPVALMEGGALAKTLFQA 406 (551)
Q Consensus 371 t--------~~~~vya~GD~~~-----~~~~~~~A~~~g~~aa~~i~g~ 406 (551)
. ..++||+.|-+-. .+.+...|.+.|+++ +.|+|.
T Consensus 438 ~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~-~~l~g~ 485 (501)
T 4b63_A 438 VEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMV-QSIFGE 485 (501)
T ss_dssp BCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHH-HHHHHH
T ss_pred EeecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHH-HHHhcc
Confidence 2 2467999985432 144555788888765 445553
No 96
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.68 E-value=4.5e-20 Score=185.26 Aligned_cols=244 Identities=13% Similarity=0.017 Sum_probs=145.2
Q ss_pred CCccEEEECCChHHHHHHHHHHh--CCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCC
Q 008841 71 YDFDLFTIGAGSGGVRASRFAAN--FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFG 148 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 148 (551)
.++||+|||||||||+||++|++ .|++|+|||+ ...+||.|.+.+|++++..+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk---------~~~~GG~~~~~~~~~~~~~l~~-------------- 120 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES---------SVAPGGGSWLGGQLFSAMVMRK-------------- 120 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS---------SSSCCTTTTCCSTTCCCEEEET--------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC---------CCCCCceEEeCCccCCHHHHHH--------------
Confidence 35899999999999999999975 6999999993 5678999988887764321100
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecCCEEEEcCEEEEeCeEEEcCCCCCCCCCCCC
Q 008841 149 WKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGRPFIPDIPG 228 (551)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~v~v~g~~~~~d~lviAtG~~p~~p~i~g 228 (551)
.....+++.++++.... ......+.++++++..+..+.++|
T Consensus 121 ---------------------------~~~~~~~e~Gv~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~g 161 (326)
T 3fpz_A 121 ---------------------------PAHLFLQELEIPYEDEG------------DYVVVKHAALFISTVLSKVLQLPN 161 (326)
T ss_dssp ---------------------------TTHHHHHHTTCCCEECS------------SEEEESCHHHHHHHHHHHHHTSTT
T ss_pred ---------------------------HHHHHHHHcCCEEEECC------------cceecceeEEEEcchhhhcccccc
Confidence 00112344566654421 223344445556666666666666
Q ss_pred CCce-----ecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEE
Q 008841 229 SEYA-----IDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEF 303 (551)
Q Consensus 229 ~~~~-----~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 303 (551)
.+.. ..+..........++++++|+|.++++.|..+...+.++++..+.......... ... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~~----------~~~-~~- 229 (326)
T 3fpz_A 162 VKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRDL----------SQK-HG- 229 (326)
T ss_dssp EEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBCT----------TSC-CC-
T ss_pred ceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccccc----------eee-cc-
Confidence 4311 111111112234689999999999999999999999999998876543221100 000 00
Q ss_pred EcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCCCccccCeeecCCCCeEeCCCCCCCCCcEEEeCcCC
Q 008841 304 HTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNLGLEKVGVKMTKNGAIEVDEYSGTAVPSIWAVGDVT 383 (551)
Q Consensus 304 ~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~vya~GD~~ 383 (551)
.+......+.. . ........+.+|.++.+.|..|.. ....+ +.|.+|+.++|++|+|||+||++
T Consensus 230 ----~~~~~~g~~~~-~-~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~e-~~iv~~~~~~t~vpGv~aaGDaa 293 (326)
T 3fpz_A 230 ----VILSTTGHDGP-F-GAFCAKRIVDIDQNQKLGGMKGLD---------MNHAE-HDVVIHSGAYAGVDNMYFAGMEV 293 (326)
T ss_dssp ----EEEECCCSCSS-S-CSHHHHHHHHHCTTCCCCCCCCBC---------HHHHH-HHHHHHCEECTTSBTEEECTHHH
T ss_pred ----eEEEEecceee-E-eecceeEEEecCceeeecceeccc---------ccccC-CeEEECCCeEECCCCEEEEchHh
Confidence 01111110000 0 000000123455555555555432 22222 46888899999999999999997
Q ss_pred CC----C---CChHHHHHhHHHHHHHHc
Q 008841 384 DR----I---NLTPVALMEGGALAKTLF 404 (551)
Q Consensus 384 ~~----~---~~~~~A~~~g~~aa~~i~ 404 (551)
+. + +....++.+|+.||+.|+
T Consensus 294 ~~v~g~~rmGp~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 294 AELDGLNRMGPTFGAMALSGVHAAEQIL 321 (326)
T ss_dssp HHHHTCCBCCSCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCcCchHHHHHHHHHHHHHHHHH
Confidence 52 1 233356788999999876
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.67 E-value=3.7e-17 Score=168.24 Aligned_cols=197 Identities=18% Similarity=0.256 Sum_probs=110.2
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCC--------CCee--ccCCCcchHHHHHhhhh--
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGV--------GGTC--VLRGCVPKKLLVYASKF-- 137 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~--------GG~~--~~~g~~p~~~l~~~~~~-- 137 (551)
+.++||+|||||++|+++|+.|++.|.+|+|||+ ...+ ||.| .+.+|.|.+.+....++
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk---------~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~ 72 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDN---------GKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVK 72 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeC---------CCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHH
Confidence 3468999999999999999999999999999993 2222 5566 55666654322100000
Q ss_pred --------hhHhhhccCCCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEe--c----CCE--
Q 008841 138 --------SHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIV--D----PHT-- 200 (551)
Q Consensus 138 --------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i--~----~~~-- 200 (551)
...+..+..+|+.+... ++..++... ....+...+.+.+++.|++++.+. +..+ + ...
T Consensus 73 ~~l~~~~~~~~~~~~~~~Gi~~~~~---~~g~~~p~~--~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~ 147 (401)
T 2gqf_A 73 SALARYTNWDFISLVAEQGITYHEK---ELGQLFCDE--GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFV 147 (401)
T ss_dssp HHHHHSCHHHHHHHHHHTTCCEEEC---STTEEEETT--CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEE
T ss_pred HHHHhCCHHHHHHHHHhCCCceEEC---cCCEEccCC--CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEE
Confidence 01111122233321100 000000000 011122233444556689988764 3333 3 233
Q ss_pred EEEcCEEEEeCeEEEcCCCCCC--------------------CCCCCCCCcee-cchh-h---hcCCCCCCeEEEEc---
Q 008841 201 VDVDGKLYSARHILISVGGRPF--------------------IPDIPGSEYAI-DSDA-A---LDLPSKPEKIAIVG--- 252 (551)
Q Consensus 201 v~v~g~~~~~d~lviAtG~~p~--------------------~p~i~g~~~~~-~~~~-~---~~~~~~~~~vvViG--- 252 (551)
+..++..+.+|+||+|||+.+. .|..|+...+. +.++ + +.....+.++.|+|
T Consensus 148 v~~~~g~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~~~~~i~G~~~ 227 (401)
T 2gqf_A 148 LQVNSTQWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLPVTITALCGKS 227 (401)
T ss_dssp EEETTEEEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEEEEEEETTSCE
T ss_pred EEECCCEEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccCCCeeeeeEEEEcCCce
Confidence 3334558999999999998772 23344443222 2332 3 23333355666668
Q ss_pred ------------CcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCH
Q 008841 253 ------------GGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDE 286 (551)
Q Consensus 253 ------------~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~ 286 (551)
+|+++++++..+++ |.+|++ .++|.++.
T Consensus 228 ~~g~~l~t~~g~sG~~~l~~s~~~~~-~~~~~i-----~~~p~~~~ 267 (401)
T 2gqf_A 228 FYNQLLFTHRGISGPAVLQISNYWQP-TESVEI-----DLLPNHNV 267 (401)
T ss_dssp EEEEEEECSSEEESHHHHHHTTTCCT-TCCEEE-----ESCSSSCH
T ss_pred EEeCEEEECCCccHHHHHHHHHHHhc-CCEEEE-----ECCCCCCH
Confidence 89999999998876 777775 35666553
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.62 E-value=1.1e-15 Score=145.19 Aligned_cols=158 Identities=17% Similarity=0.198 Sum_probs=115.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc-----------------cCCCC-------CHHHHHHHHHHHHhc-C
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK-----------------VLRGF-------DEDIRDFVAEQMSLR-G 300 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~-----------------~l~~~-------~~~~~~~l~~~l~~~-G 300 (551)
.+|+|||+|+.|+++|..|++.|.+|+++++... ++..+ ...+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 3699999999999999999999999999998721 11111 126667788888887 9
Q ss_pred cEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCCC-C--------------------ccccCeeecC
Q 008841 301 IEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKNL-G--------------------LEKVGVKMTK 359 (551)
Q Consensus 301 v~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~l-~--------------------l~~~gl~~~~ 359 (551)
++++ +++|+++..+++....|.+.+|+++++|.||+|+|..++...+ + +.+.+++++.
T Consensus 84 v~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~ 162 (232)
T 2cul_A 84 LHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFVE 162 (232)
T ss_dssp EEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEEE
T ss_pred cEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEEc
Confidence 9999 5699999887665456888889889999999999996553210 0 1122333321
Q ss_pred CCC---------------eEeCC------CC-CCCCCcEEEeCcCCCCCCChHHHHHhHHHHHHHHcC
Q 008841 360 NGA---------------IEVDE------YS-GTAVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 360 ~G~---------------i~vd~------~~-~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~g 405 (551)
..+ ..+.. .+ +|++|+|||+|||+ .......|+.||+.+|.+|..
T Consensus 163 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 163 REGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHh
Confidence 110 00110 11 26999999999999 777888899999999999864
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.60 E-value=9.4e-17 Score=167.38 Aligned_cols=98 Identities=17% Similarity=0.060 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecC--------cCCCCCCCCccccCee
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATG--------RRPNTKNLGLEKVGVK 356 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G--------~~p~~~~l~l~~~gl~ 356 (551)
+..+...+.+.+++.| +++++++|++|+.++++ +.|++.+|+++.+|.||+|+| +.|+......+..+..
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~ 280 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDV-VNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEG 280 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSS-EEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHC
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe-EEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhC
Confidence 4445666667777778 99999999999887776 779999998899999999999 7887764222222222
Q ss_pred ecCCCCeEeCCCCCCCCCcEEEeCcCCCC
Q 008841 357 MTKNGAIEVDEYSGTAVPSIWAVGDVTDR 385 (551)
Q Consensus 357 ~~~~G~i~vd~~~~t~~~~vya~GD~~~~ 385 (551)
.. ...++|+..++|+.+++|+.||+...
T Consensus 281 ~~-~~~~kv~~~~~~~~~~i~~~~d~~~~ 308 (431)
T 3k7m_X 281 HG-GQGLKILIHVRGAEAGIECVGDGIFP 308 (431)
T ss_dssp CC-CCEEEEEEEEESCCTTEEEEBSSSSS
T ss_pred CC-cceEEEEEEECCCCcCceEcCCCCEE
Confidence 12 23599999999999999999998653
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.46 E-value=1.1e-13 Score=147.98 Aligned_cols=167 Identities=17% Similarity=0.187 Sum_probs=96.6
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhcc-----
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESN----- 145 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~----- 145 (551)
.+|||+|||||+||++||+.|++.|.+|+|||+. ...+| +.+|.|+........+...+..+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~--------~~~iG----~~~Cnps~ggia~~~lv~ei~algg~~~~ 94 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHN--------IDTLG----QMSCNPAIGGIGKGHLVKEVDALGGLMAK 94 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESC--------GGGTT----CCSSSSEEESTTHHHHHHHHHHTTCSHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeec--------ccccc----cccccccccchhhHHHHHHHHHhccHHHH
Confidence 3699999999999999999999999999999931 01222 234544321111111111111110
Q ss_pred -------CCCcccC-CCC-------CCChHHHHHHHHHHHHHHHHHHHHHHHh-CCeEEEEeEEEEe--cCCE---EEE-
Q 008841 146 -------GFGWKYG-TEP-------QHDWSTLIANKNAELQRLTGIYKNILIN-AGITLIEGRGKIV--DPHT---VDV- 203 (551)
Q Consensus 146 -------~~g~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~i--~~~~---v~v- 203 (551)
.|.+... ..+ ..+.. .+...+.+.+++ .+++++.+.+..+ +... +.+
T Consensus 95 ~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~-----------~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~ 163 (651)
T 3ces_A 95 AIDQAGIQFRILNASKGPAVRATRAQADRV-----------LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQ 163 (651)
T ss_dssp HHHHHEEEEEEESTTSCGGGCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEET
T ss_pred HhhhcccchhhhhcccCcccccchhhCCHH-----------HHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEEC
Confidence 0000000 000 01111 122334445566 5899988877776 3443 333
Q ss_pred cCEEEEeCeEEEcCCCCCCCCCCCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEe
Q 008841 204 DGKLYSARHILISVGGRPFIPDIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFI 275 (551)
Q Consensus 204 ~g~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~ 275 (551)
++..+.+|.||+|||+.+..+.++|.... .+.+ +| |.++++++..|.++|.+|+.+.
T Consensus 164 dG~~I~Ad~VVLATGt~s~~~~i~G~~~~-----------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 164 MGLKFRAKAVVLTVGTFLDGKIHIGLDNY-----------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp TSEEEEEEEEEECCSTTTCCEEECC----------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred CCCEEECCEEEEcCCCCccCccccCcccC-----------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 67889999999999998887777775421 1233 56 7899999999999999998885
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.33 E-value=2.1e-11 Score=129.83 Aligned_cols=167 Identities=19% Similarity=0.221 Sum_probs=98.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhcc------
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESN------ 145 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~------ 145 (551)
+|||+|||||+||++||+.|++.|.+|+|||+. ...+| ..+|.|+........+...+..+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~--------~~~iG----~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLN--------ADTIG----QMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC--------GGGTT----CCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEec--------ccccC----CcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 599999999999999999999999999999931 11233 234544321000000111111000
Q ss_pred ------CCCcccC-CCC-------CCChHHHHHHHHHHHHHHHHHHHHHHHh-CCeEEEEeEEEEe--cCCE---EEE-c
Q 008841 146 ------GFGWKYG-TEP-------QHDWSTLIANKNAELQRLTGIYKNILIN-AGITLIEGRGKIV--DPHT---VDV-D 204 (551)
Q Consensus 146 ------~~g~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~i--~~~~---v~v-~ 204 (551)
.|.+... ..+ ..+.. .+...+.+.+++ .+++++.+.+..+ +... +.+ +
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~-----------~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~d 163 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKK-----------RYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNL 163 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETT
T ss_pred hhhcccceeecccccCccccchhhhCCHH-----------HHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECC
Confidence 0100000 000 01111 122334445565 5899988777764 3343 333 6
Q ss_pred CEEEEeCeEEEcCCCCCCCCCCCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEee
Q 008841 205 GKLYSARHILISVGGRPFIPDIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIR 276 (551)
Q Consensus 205 g~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~ 276 (551)
+..+.+|.||+|||..+..+.++|..... +.+ + |+..+++++..|.++|.+++.+..
T Consensus 164 G~~i~AdaVVLATG~~s~~~~~~G~~~~~-----------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 164 GVEYKTKAVVVTTGTFLNGVIYIGDKMIP-----------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp SCEEECSEEEECCTTCBTCEEEETTEEEE-----------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred CcEEEeCEEEEccCCCccCceeccceecC-----------CCC---C-CchhHHHHHHHHHhcCCceEEecC
Confidence 77899999999999988877677654211 122 2 356788999999999988776653
No 102
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.27 E-value=1.2e-11 Score=121.11 Aligned_cols=160 Identities=13% Similarity=0.157 Sum_probs=111.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC-CCeEEEEeecCccCCC--------------------------------------CCH
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL-TSEVHVFIRQKKVLRG--------------------------------------FDE 286 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 286 (551)
.+|+|||+|++|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 3799999999999999999997 9999999988654210 123
Q ss_pred HHHHHHHHHHHh-cCcEEEcCcccEEEEEcCCceEEEEEC---------CC-----eEEEeeEEEEecCcCCCCCCCCcc
Q 008841 287 DIRDFVAEQMSL-RGIEFHTEESPQAILKSTDGSLSVKTN---------KG-----TVDGFSHVMFATGRRPNTKNLGLE 351 (551)
Q Consensus 287 ~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~~~V~~~---------~G-----~~i~~d~vi~a~G~~p~~~~l~l~ 351 (551)
++...+.+.+.+ .|++++++++|+++..+++.+..|.+. +| .++++|.||+|+|..++......+
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 444556666655 699999999999998776653345442 32 579999999999988765421111
Q ss_pred ---ccC--eeecCCCCeEeCC-------CCCCCCCcEEEeCcCCCC-------CCChHHHHHhHHHHHHHHcC
Q 008841 352 ---KVG--VKMTKNGAIEVDE-------YSGTAVPSIWAVGDVTDR-------INLTPVALMEGGALAKTLFQ 405 (551)
Q Consensus 352 ---~~g--l~~~~~G~i~vd~-------~~~t~~~~vya~GD~~~~-------~~~~~~A~~~g~~aa~~i~g 405 (551)
..+ +.+....++.+|. ..+++.|++|++||++.. .+.+..+..+|+.+|.++..
T Consensus 200 ~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 111 1112222344442 345678999999998741 24566889999999999874
No 103
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.24 E-value=9.3e-11 Score=118.83 Aligned_cols=59 Identities=8% Similarity=0.009 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRP 343 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p 343 (551)
+..+.+.+.+.+++.|++++++++|++++.++++.+.|.+.+| .++.+|.||+|+|...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 4567888899999999999999999999987665467888888 4799999999999875
No 104
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.16 E-value=3.2e-10 Score=116.89 Aligned_cols=57 Identities=21% Similarity=0.373 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
.++.+.+.+.+++.|++++++++|+++..++++ +.|.+.+| ++.+|.||+|+|..+.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~~V~~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-FRVTTSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEEECCc-EEEeeEEEECCCCccC
Confidence 456777888899999999999999999887766 78888888 7999999999999874
No 105
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.07 E-value=1.8e-09 Score=110.16 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
+..+.+.+.+.+++.|++++.+++|+++..++++ +.|.+.+| ++.+|.||+|+|....
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEA-LFIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSS-EEEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCE-EEEEcCCc-eEEcCEEEECCChhHH
Confidence 4567888889999999999999999999877666 57888777 7999999999998654
No 106
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.06 E-value=4.1e-10 Score=121.55 Aligned_cols=32 Identities=38% Similarity=0.494 Sum_probs=30.5
Q ss_pred CccEEEECCChHHHHHHHHHHhCC--CcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFG--ASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~ 103 (551)
++||||||||+||+++|+.|++.| .+|+||||
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk 38 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISK 38 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeC
Confidence 589999999999999999999999 99999995
No 107
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.05 E-value=1.3e-10 Score=123.27 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
..+.+.+.+.+++.|++++++++|+++..++++...|.+.+|+++.+|.||+|+|..+..
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARD 279 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 567778888899999999999999999987766566899999999999999999998853
No 108
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.05 E-value=9.4e-09 Score=104.77 Aligned_cols=58 Identities=21% Similarity=0.117 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
+..+...+.+.+++.|++++.+++|++++.++++...|.+.+| ++.+|.||+|+|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 4566778888899999999999999999987766333888887 699999999999875
No 109
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.05 E-value=1.2e-08 Score=104.29 Aligned_cols=72 Identities=18% Similarity=0.177 Sum_probs=56.4
Q ss_pred CeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 269 SEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 269 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
..+.++...+..+. +..+...+.+.+++.|++++.+++|++++.++++ +.|.+.+| ++.+|.||+|+|..+.
T Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-VKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp TEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-EEEEETTE-EEEEEEEEECCGGGHH
T ss_pred CceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-EEEEeCCC-EEEeCEEEEecCccHH
Confidence 44566655443332 4577888899999999999999999999987666 67888776 6999999999998754
No 110
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.04 E-value=5.3e-09 Score=114.96 Aligned_cols=59 Identities=15% Similarity=0.154 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
...+...+.+.+++.|++++++++|+++..++++ +.|.+.+|.++.+|.||+|+|....
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC-WLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe-EEEEECCCCEEECCEEEECCCcchh
Confidence 4567788888999999999999999999987776 7888888888999999999998754
No 111
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.03 E-value=1.4e-10 Score=123.62 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=29.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
++||||||||+||++||+.|++ |.+|+||||
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk 38 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSK 38 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECS
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEEC
Confidence 5899999999999999999999 999999994
No 112
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.03 E-value=5.9e-09 Score=114.76 Aligned_cols=59 Identities=15% Similarity=0.222 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCe-EEEeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGT-VDGFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~-~i~~d~vi~a~G~~p~ 344 (551)
+..+...+.+.+++.|++++++++|+++..++++ +.|.+.+|+ ++.+|.||+|+|....
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-WQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-EEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-EEEEeCCCcEEEECCEEEECCCcchh
Confidence 4567788888999999999999999999988777 788888886 7999999999998753
No 113
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.02 E-value=5.5e-09 Score=107.31 Aligned_cols=57 Identities=16% Similarity=0.184 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
..+.+.+.+.+++.|++++.+++|+++..++++.+.|.+.+| ++.+|.||+|+|...
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 467788889999999999999999999987666567888888 699999999999865
No 114
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.02 E-value=1e-08 Score=105.13 Aligned_cols=56 Identities=20% Similarity=0.286 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
..+...+.+.+++.|++++++++|++++.++++ +.|.+.+| ++.+|.||+|+|...
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADG-VSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-EEEEECCC-EEEcCEEEEcCCcCh
Confidence 356677888888999999999999999887665 66777766 699999999999863
No 115
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.00 E-value=1.4e-08 Score=105.55 Aligned_cols=60 Identities=12% Similarity=0.146 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCc---ccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEE---SPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~---~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
...+...+.+.+++.|+++++++ +|++|..++++...|++.+|+++.+|.||+|+|....
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 35677888899999999999999 9999988766644499999988999999999998754
No 116
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.99 E-value=1.4e-09 Score=116.36 Aligned_cols=168 Identities=17% Similarity=0.144 Sum_probs=96.7
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhcc-----
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESN----- 145 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~----- 145 (551)
.+|||+|||||+||++||+.|++.|.+|+|||+. ...+|+ .+|.|+.......++...+....
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~--------~~~iG~----~~c~ps~gGia~~~lv~el~al~g~~~~ 87 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSD--------LSAVAR----MSCNPAIGGVAKGQITREIDALGGEMGK 87 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESC--------GGGTTC----CSSCSEEECHHHHHHHHHHHHHTCSHHH
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEec--------ccccCC----CccccchhhhhHHHHHHHHHhcccHHHH
Confidence 4699999999999999999999999999999931 112333 33444321111111111111000
Q ss_pred -------CCCcccC-CCC-------CCChHHHHHHHHHHHHHHHHHHHHHHHh-CCeEEEEeEEEEe--cCCEEE---E-
Q 008841 146 -------GFGWKYG-TEP-------QHDWSTLIANKNAELQRLTGIYKNILIN-AGITLIEGRGKIV--DPHTVD---V- 203 (551)
Q Consensus 146 -------~~g~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~i--~~~~v~---v- 203 (551)
.|..... ..+ ..+.. .+...+.+.+++ .+++++.+.+..+ +...+. +
T Consensus 88 ~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~-----------~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~ 156 (641)
T 3cp8_A 88 AIDATGIQFRMLNRSKGPAMHSPRAQADKT-----------QYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVR 156 (641)
T ss_dssp HHHHHEEEEEEECSSSCTTTCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEET
T ss_pred HHHhcCCchhhcccccCccccchhhhcCHH-----------HHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEEC
Confidence 0100000 001 11211 122233444555 4899988877664 345443 3
Q ss_pred cCEEEEeCeEEEcCCCCCCCCCCCCCCceecchhhhcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEe
Q 008841 204 DGKLYSARHILISVGGRPFIPDIPGSEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFI 275 (551)
Q Consensus 204 ~g~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~ 275 (551)
++..+.+|.||+|||..+..+.++|....- ..+++ |+.++++++..|.+.|.+|..+.
T Consensus 157 ~G~~i~Ad~VVLATG~~s~~~i~~G~~~~~-----------~g~~v---G~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 157 SGRAIQAKAAILACGTFLNGLIHIGMDHFP-----------GGRST---AEPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp TSCEEEEEEEEECCTTCBTCEEEETTEEEE-----------CSSST---TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred CCcEEEeCEEEECcCCCCCccceeeeeeec-----------ccccc---CCchhhhhHHHHHhCCceEEeec
Confidence 677899999999999887654443432110 01111 35678899999999999987664
No 117
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.97 E-value=9.4e-09 Score=106.22 Aligned_cols=57 Identities=12% Similarity=0.135 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCc-eEEEEECCCe--EEEeeEEEEecCcCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDG-SLSVKTNKGT--VDGFSHVMFATGRRP 343 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~V~~~~G~--~i~~d~vi~a~G~~p 343 (551)
.+.+.+.+.+++.|++++.+++|++++.++++ .+.+.+.+|+ ++.+|.||.|+|..+
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 45667778888889999999999999887655 3456778887 699999999999876
No 118
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.97 E-value=2.5e-09 Score=111.51 Aligned_cols=59 Identities=19% Similarity=0.262 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
..+.+.+.+.+++.||+++++++|+++..++++++.|.+.+|+++.+|.||+|+|..+.
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~ 192 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKSV 192 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCcC
Confidence 45677788888899999999999999987665557788888888999999999999873
No 119
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.91 E-value=2.4e-08 Score=101.29 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
..+...+.+.+++.|++++.+++|++++.++++ +.|.+.+|+ +.+|.||+|+|....
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-VTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESSCE-EEEEEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-EEEEECCCe-EEcCEEEEcCCccHH
Confidence 366778888899999999999999999987666 778888885 999999999998653
No 120
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.89 E-value=1.2e-08 Score=108.05 Aligned_cols=58 Identities=9% Similarity=-0.101 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
..+.+.+.+.+++.|++|+++++|++|..++++...|++.||+++.+|.||++++...
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 4577888899999999999999999999988876779999999999999999887644
No 121
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.84 E-value=4.9e-08 Score=104.89 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEEC-CC--eEEEeeEEEEecCcCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN-KG--TVDGFSHVMFATGRRPN 344 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~-~G--~~i~~d~vi~a~G~~p~ 344 (551)
.+...+.+.+++.|++++.+++|+++..+++..+.|.+. +| .++.+|.||.|+|..+.
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCH
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcch
Confidence 456777888888999999999999998764444777776 67 57999999999999764
No 122
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.83 E-value=1.5e-08 Score=110.06 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=30.4
Q ss_pred CccEEEECCChHHHHHHHHHHhC------CCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANF------GASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~------G~~V~liE~ 103 (551)
++||||||||+||++||+.|++. |.+|+||||
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK 59 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDK 59 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEe
Confidence 58999999999999999999997 999999995
No 123
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.82 E-value=2.5e-08 Score=102.06 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE---CCCeEEEeeEEEEecCcCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT---NKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~---~~G~~i~~d~vi~a~G~~p 343 (551)
.+.+.+.+.+++.|++++.+++|++++.+++....|.+ .++.++.+|.||.|+|..+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 45677778888899999999999999887665333666 3556899999999999876
No 124
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.82 E-value=7.6e-09 Score=107.94 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEE---------------cCCceEEEEECCCeEE--EeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILK---------------STDGSLSVKTNKGTVD--GFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---------------~~~~~~~V~~~~G~~i--~~d~vi~a~G~~p~ 344 (551)
...+...+.+.+++.|++++.+++|+++.. +++++..|.+.+| ++ .+|.||+|+|....
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 347788899999999999999999999987 4444346888888 58 99999999998643
No 125
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.82 E-value=1.7e-08 Score=95.43 Aligned_cols=118 Identities=14% Similarity=0.156 Sum_probs=68.5
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||+|||||++|+.+|..|++.|.+|+|||+. ....| .+ |.|...-+...++...+.+ ..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~--------~~~~G-~~----~~~~~~~~~~~~~~~~~~d--~~---- 63 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS--------LDAVM-MP----FLPPKPPFPPGSLLERAYD--PK---- 63 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC--------GGGTT-CC----SSCCCSCCCTTCHHHHHCC--TT----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC--------CCcCC-cc----cCccccccchhhHHhhhcc--CC----
Confidence 589999999999999999999999999999931 12233 22 2221000000000000000 00
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEeEEEEec--CCE---EEE-cCEEEEeCeEEEcCCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINA-GITLIEGRGKIVD--PHT---VDV-DGKLYSARHILISVGGRPFI 223 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~i~--~~~---v~v-~g~~~~~d~lviAtG~~p~~ 223 (551)
+ + + ...+...+.+.+++. +++++..++..+. ... +.+ ++.++.+|.||+|+|.....
T Consensus 64 -g-~--~-----------~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 64 -D-E--R-----------VWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp -C-C--C-----------HHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred -C-C--C-----------HHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 0 0 1 112233444556665 8998876665542 333 333 56689999999999986543
No 126
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.80 E-value=5.2e-08 Score=109.56 Aligned_cols=58 Identities=16% Similarity=0.159 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
+..+...+.+.+++.|++++.+++|++++.++++...|.+.+| ++.+|.||+|+|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 4467788899999999999999999999887666456888877 699999999999864
No 127
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.80 E-value=7.5e-08 Score=99.52 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
..+.+.+.+.+++.|++|+++++|++|..++++...|.+. |+++.+|.||+|+|......+
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~l 256 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAVL 256 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHh
Confidence 5577888899999999999999999999877663447665 778999999999997654433
No 128
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.78 E-value=4.7e-08 Score=99.36 Aligned_cols=57 Identities=9% Similarity=0.045 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
...+...+.+.+++.|++++++++|+++..++++ +.|++.+| ++.+|.||+|+|...
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEeCCC-EEEcCEEEECCChhH
Confidence 3567788889999999999999999999987766 78888887 699999999999854
No 129
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.77 E-value=2.1e-08 Score=106.31 Aligned_cols=58 Identities=16% Similarity=0.149 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEc-CCceEEEEEC-CCe--EEEee-EEEEecCcCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKS-TDGSLSVKTN-KGT--VDGFS-HVMFATGRRPN 344 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~V~~~-~G~--~i~~d-~vi~a~G~~p~ 344 (551)
.+...+.+.+++.|++++++++|+++..+ ++.++.|.+. +++ ++.+| .||+|+|-...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 67888889999999999999999999987 4444456553 343 58996 99999998763
No 130
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.76 E-value=2.8e-08 Score=102.25 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
.+.+.+.+.+++ ++++++++|++++.++++ +.|++.+|+++.+|.||.|.|.....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADG-VTVWFTDGSSASGDLLIAADGSHSAL 183 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECCCTTCSS
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCc-EEEEEcCCCEEeeCEEEECCCcChHH
Confidence 455666666666 899999999999988776 88999999999999999999997654
No 131
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.76 E-value=2.2e-07 Score=99.80 Aligned_cols=60 Identities=15% Similarity=0.182 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcC-CceEEEEEC--CCe--EEEeeEEEEecCcCCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKST-DGSLSVKTN--KGT--VDGFSHVMFATGRRPNT 345 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~V~~~--~G~--~i~~d~vi~a~G~~p~~ 345 (551)
..+.+.+.+.+++.||+++++++|+++..++ +.+..|.+. +|+ ++.+|.||+|+|.....
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 4566778888889999999999999998876 554445543 776 68999999999987653
No 132
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.76 E-value=8.1e-09 Score=109.91 Aligned_cols=51 Identities=18% Similarity=0.053 Sum_probs=41.2
Q ss_pred HHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 292 VAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 292 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
.....+..|++++++++|++|+.++++ +.|.+.+|+++.+|.||+|++...
T Consensus 218 ~~~l~~~lg~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 218 SERIMDLLGDRVKLERPVIYIDQTREN-VLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHGGGEESSCCEEEEECSSSS-EEEEETTSCEEEESEEEECSCGGG
T ss_pred HHHHHHHcCCcEEcCCeeEEEEECCCe-EEEEECCCeEEEeCEEEECCCHHH
Confidence 333344458899999999999887766 778999998899999999998643
No 133
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.75 E-value=3e-08 Score=102.56 Aligned_cols=60 Identities=13% Similarity=0.027 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 284 FDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 284 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
-...+.+.+.+.+++.|++|+++++|++|..++++ + | +.+|+++.+|.||+|+|......
T Consensus 187 G~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-v-V-~~~g~~~~ad~Vv~a~~~~~~~~ 246 (421)
T 3nrn_A 187 GCKAVIDELERIIMENKGKILTRKEVVEINIEEKK-V-Y-TRDNEEYSFDVAISNVGVRETVK 246 (421)
T ss_dssp CHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTE-E-E-ETTCCEEECSEEEECSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCE-E-E-EeCCcEEEeCEEEECCCHHHHHH
Confidence 34678888999999999999999999999876665 5 5 56777899999999999765433
No 134
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.74 E-value=2.5e-09 Score=112.91 Aligned_cols=138 Identities=14% Similarity=0.104 Sum_probs=99.0
Q ss_pred EeCeEEEcCCCCCCCCCCCCCC--cee---cchhhhcC--------------CCCCCeEEEEcCcHHHHHHHHHHHhCCC
Q 008841 209 SARHILISVGGRPFIPDIPGSE--YAI---DSDAALDL--------------PSKPEKIAIVGGGYIALEFAGIFSGLTS 269 (551)
Q Consensus 209 ~~d~lviAtG~~p~~p~i~g~~--~~~---~~~~~~~~--------------~~~~~~vvViG~G~~g~e~a~~l~~~g~ 269 (551)
.||++++++|++|..+++++.+ .+. ...+.... .....+|+|||+|+.|+.+|..|++.|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 4677888999988766544321 111 11111111 2345799999999999999999999999
Q ss_pred eEEEEeecCccCCC-----CC----------------------------HHHHHHHHHHHHhcCcEEEcCcccEEEEEcC
Q 008841 270 EVHVFIRQKKVLRG-----FD----------------------------EDIRDFVAEQMSLRGIEFHTEESPQAILKST 316 (551)
Q Consensus 270 ~Vtlv~~~~~~l~~-----~~----------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~ 316 (551)
+|+++++.+.+... .+ .++.+.+.+.+++.|++++++++|+++..++
T Consensus 117 ~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~ 196 (497)
T 2bry_A 117 RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPP 196 (497)
T ss_dssp EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCC
T ss_pred eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEec
Confidence 99999987653210 00 4556677788888999999999999998642
Q ss_pred --CceEEEEE--C-CC--eEEEeeEEEEecCcCCCCC
Q 008841 317 --DGSLSVKT--N-KG--TVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 317 --~~~~~V~~--~-~G--~~i~~d~vi~a~G~~p~~~ 346 (551)
+..+.|.+ . +| +++.+|.||+|+|..+...
T Consensus 197 ~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 197 RKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp STTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred CCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 22356666 4 66 4699999999999988764
No 135
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.74 E-value=8.5e-09 Score=113.90 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=37.2
Q ss_pred cCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCc
Q 008841 299 RGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGR 341 (551)
Q Consensus 299 ~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~ 341 (551)
.|++|+++++|++|+.++++ +.|++.+|+++.+|.||+|+..
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~-v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDE-VQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSS-EEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCE-EEEEECCCcEEEcCEEEECCCH
Confidence 37899999999999987777 7899999988999999999854
No 136
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.74 E-value=5.3e-08 Score=99.29 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE-CCCe--EEEeeEEEEecCcCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT-NKGT--VDGFSHVMFATGRRPN 344 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~-~~G~--~i~~d~vi~a~G~~p~ 344 (551)
.+...+.+..++.|++++.+++++.+..+++....+.. .+++ ++.+|.||-|.|....
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccH
Confidence 34566777788899999999999999887766343433 2333 6899999999998654
No 137
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.73 E-value=2.2e-07 Score=99.91 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcC-CceEEEEEC--CCe--EEEeeEEEEecCcCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKST-DGSLSVKTN--KGT--VDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~V~~~--~G~--~i~~d~vi~a~G~~p~ 344 (551)
..+.+.+.+.+++.||+++++++|+++..++ +.+..|.+. +|+ ++.+|.||+|+|....
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 4567778888889999999999999998866 444445543 676 6899999999998654
No 138
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.72 E-value=1.4e-07 Score=94.64 Aligned_cols=96 Identities=14% Similarity=0.127 Sum_probs=80.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc---------------------CCCCC-----------HHHHHHHH
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV---------------------LRGFD-----------EDIRDFVA 293 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~---------------------l~~~~-----------~~~~~~l~ 293 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++.+. .++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 37999999999999999999999999999987642 11110 57778888
Q ss_pred HHHHhcCcEEEcCcccEEEEEcCCceEE-EEECCCeEEEeeEEEEecCcCC
Q 008841 294 EQMSLRGIEFHTEESPQAILKSTDGSLS-VKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 294 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~-V~~~~G~~i~~d~vi~a~G~~p 343 (551)
+.+++.|++++++++|++++.+++. +. |.+.+| ++.+|.||+|+|..+
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGER-LRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTE-EEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCc-EEEEEeCCC-EEEeCEEEECCCCCC
Confidence 8899999999999999999987765 66 888887 799999999999643
No 139
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.71 E-value=5.4e-08 Score=87.89 Aligned_cols=108 Identities=20% Similarity=0.268 Sum_probs=66.2
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCccc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKY 151 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 151 (551)
+|||+|||||++|+.+|..|++.|.+|+|||+ .. +.+... ..+..++.+ +
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~----------~~--~~~~~~---------------~~~~~~~~~--~- 50 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDG----------GR--SKVKGV---------------SRVPNYPGL--L- 50 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC----------SC--CTTTTC---------------SCCCCSTTC--T-
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeC----------CC--CcccCc---------------hhhhccCCC--c-
Confidence 37999999999999999999999999999993 11 000000 000000000 0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeEEEEecC--C--EEEE-cCEEEEeCeEEEcCCCCCCCC
Q 008841 152 GTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDP--H--TVDV-DGKLYSARHILISVGGRPFIP 224 (551)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~--~--~v~v-~g~~~~~d~lviAtG~~p~~p 224 (551)
....... +...+.+.+++.+++++.+++..++. . .+.+ ++ ++.+|.||+|+|..|.++
T Consensus 51 ---~~~~~~~-----------~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~ 113 (180)
T 2ywl_A 51 ---DEPSGEE-----------LLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLP 113 (180)
T ss_dssp ---TCCCHHH-----------HHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHH
T ss_pred ---CCCCHHH-----------HHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCcc
Confidence 0111222 22233445667799998875544432 2 3343 45 899999999999998543
No 140
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.69 E-value=8.9e-08 Score=93.39 Aligned_cols=32 Identities=34% Similarity=0.458 Sum_probs=30.3
Q ss_pred CccEEEECCChHHHHHHHHHHhC-CCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANF-GASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~ 103 (551)
++||+|||||++|+++|..|++. |.+|+|||+
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk 71 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 71 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEES
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEEC
Confidence 58999999999999999999996 999999994
No 141
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.66 E-value=1.6e-07 Score=99.64 Aligned_cols=59 Identities=12% Similarity=0.277 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCce--EEEEECCCe--EEEeeEEEEecCcCCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGS--LSVKTNKGT--VDGFSHVMFATGRRPNT 345 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~--~~V~~~~G~--~i~~d~vi~a~G~~p~~ 345 (551)
.+.+.+.+.+++.|++++.+++|+++..+++.+ +.+...+|+ ++.+|.||.|+|.....
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSS
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHH
Confidence 456777888888999999999999999876653 334445674 79999999999997654
No 142
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.66 E-value=2.8e-07 Score=98.66 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECC---C--eEEEeeEEEEecCcCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNK---G--TVDGFSHVMFATGRRP 343 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~---G--~~i~~d~vi~a~G~~p 343 (551)
+..+...+.+.+++.|++++++++|+++..+++++..|++.+ | .++.+|.||+|+|...
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 456778888888999999999999999998776644566643 3 4689999999999864
No 143
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.65 E-value=1.5e-07 Score=94.39 Aligned_cols=48 Identities=15% Similarity=0.171 Sum_probs=39.9
Q ss_pred HHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 294 EQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 294 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
...++.|++++++++|++|+.++++ +.|.+.+|+.+.+|.||+|+...
T Consensus 117 ~l~~~~g~~i~~~~~V~~i~~~~~~-~~v~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 117 HYLKESGAEVYFRHRVTQINLRDDK-WEVSKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp HHHHHHTCEEESSCCEEEEEECSSS-EEEEESSSCCEEESEEEECSCHH
T ss_pred HHHHhcCCEEEeCCEEEEEEEcCCE-EEEEECCCCEEEcCEEEECCCHH
Confidence 3334448999999999999988777 78999999878999999998753
No 144
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.62 E-value=2.2e-07 Score=99.92 Aligned_cols=58 Identities=24% Similarity=0.298 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCc-eEEEEEC------CC---------eEEEeeEEEEecCcCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDG-SLSVKTN------KG---------TVDGFSHVMFATGRRPN 344 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~V~~~------~G---------~~i~~d~vi~a~G~~p~ 344 (551)
.+.+.+.+.+++.|++++++++|+++..++++ +..|.+. +| .++.+|.||.|.|..+.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 45677788888889999999999999887644 3447765 33 57999999999999875
No 145
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.62 E-value=4e-08 Score=97.28 Aligned_cols=47 Identities=28% Similarity=0.406 Sum_probs=37.2
Q ss_pred CccEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANF--GASVAICELPFSTISSETTGGVGGTCVLRGCVP 127 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p 127 (551)
++||+|||||++|+++|+.|++. |++|+|||+ ....||.+...++.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk---------~~~~GGg~~~~g~~~ 127 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEA---------GVAPGGGAWLGGQLF 127 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEES---------SSSCCTTTTCCBTTC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeC---------CCccCCccccCCccc
Confidence 58999999999999999999996 999999993 334555544444443
No 146
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.61 E-value=9e-07 Score=95.03 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcC-CceEEEEEC--CCe--EEEeeEEEEecCcCCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKST-DGSLSVKTN--KGT--VDGFSHVMFATGRRPNT 345 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~V~~~--~G~--~i~~d~vi~a~G~~p~~ 345 (551)
..+...+.+.+++.||+++++++|+++..++ +.+..|.+. +|+ ++.+|.||+|+|..++.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 3566778888889999999999999998766 554445553 675 58999999999987753
No 147
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.61 E-value=1.2e-07 Score=100.11 Aligned_cols=32 Identities=34% Similarity=0.478 Sum_probs=30.7
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..+||+|||||++|+++|..|++.|.+|+|||
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE 122 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVE 122 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEE
Confidence 46899999999999999999999999999999
No 148
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.60 E-value=1.6e-07 Score=93.45 Aligned_cols=100 Identities=23% Similarity=0.296 Sum_probs=83.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC---------------CCC----CHHHHHHHHHHHHhcCcEEEcC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL---------------RGF----DEDIRDFVAEQMSLRGIEFHTE 306 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l---------------~~~----~~~~~~~l~~~l~~~Gv~i~~~ 306 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 479999999999999999999999999999976321 111 2567777888888899999999
Q ss_pred cccEEEEEcCCceEEEEECCCeEEEeeEEEEecCc---CCCCC
Q 008841 307 ESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGR---RPNTK 346 (551)
Q Consensus 307 ~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~---~p~~~ 346 (551)
++|.+++.++++.+.|.+.+|+ +.+|.||+|+|. .|...
T Consensus 88 ~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 88 QAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp CCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCC
T ss_pred CEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCC
Confidence 9999999877644788998887 999999999999 66543
No 149
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.60 E-value=8.5e-07 Score=95.40 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEc-CCceEEEEE---CCCe--EEEeeEEEEecCcCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKS-TDGSLSVKT---NKGT--VDGFSHVMFATGRRP 343 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~V~~---~~G~--~i~~d~vi~a~G~~p 343 (551)
..+...+.+.+++.||++++++.|+++..+ ++.+..|.. .+|+ .+.++.||+|+|...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 466777888888899999999999999875 444444543 4665 589999999999754
No 150
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.59 E-value=8.1e-07 Score=93.23 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
.+.+.+.+.+++.|++|+++++|++|+.++++.+.|.+ ++.++.+|.||+|++..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHH
Confidence 57788888899999999999999999886655466766 45579999999999764
No 151
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.59 E-value=3.4e-08 Score=94.91 Aligned_cols=41 Identities=24% Similarity=0.423 Sum_probs=36.2
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeec
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCV 121 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~ 121 (551)
.+||+|||||||||+||+.|++.|++|+|||+ ...+||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek---------~~~~GG~~~ 42 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK---------SRGSGGRMS 42 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---------CCCCCCccc
Confidence 48999999999999999999999999999994 456777653
No 152
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.58 E-value=2.5e-07 Score=91.51 Aligned_cols=99 Identities=16% Similarity=0.120 Sum_probs=81.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec--Ccc--------CCCC----CHHHHHHHHHHHHhcCcEEEcCcccEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ--KKV--------LRGF----DEDIRDFVAEQMSLRGIEFHTEESPQA 311 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~--~~~--------l~~~----~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 311 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+ .+.+ ..++.+.+.+.+++.|++++. ++|.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999985 111 1222 246777788888899999999 89999
Q ss_pred EEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 312 ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 312 i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
+..+++. +.+.+.+|+++.+|.||+|+|..|...
T Consensus 95 i~~~~~~-~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENRGDE-FVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC--C-EEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEecCCE-EEEEECCCCEEEcCEEEECcCCCCccC
Confidence 9887655 778899988999999999999987654
No 153
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.58 E-value=2.3e-07 Score=97.97 Aligned_cols=57 Identities=11% Similarity=0.075 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhcC-cEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 285 DEDIRDFVAEQMSLRG-IEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
...+.+.+.+.+++.| ++++++++|++|+.++++ +.|++.+|+++.+|.||+|+|..
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-ARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-EEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-EEEEECCCCEEEcCEEEECCCHH
Confidence 3467777888888888 999999999999987766 78889999889999999999864
No 154
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.57 E-value=2.8e-07 Score=98.76 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE--CCC-eEEEeeEEEEecCcCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT--NKG-TVDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~--~~G-~~i~~d~vi~a~G~~p~ 344 (551)
..+.+.+.+.+++.|++++++++|++++.++++ +.|++ .+| +++.+|.||.|.|.+..
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v~v~~~~~~G~~~~~a~~vV~ADG~~S~ 208 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-VEVTVAGPSGPYPVRARYGVGCDGGRST 208 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-EEEEEEETTEEEEEEESEEEECSCSSCH
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-EEEEEEeCCCcEEEEeCEEEEcCCCCch
Confidence 456677888888889999999999999887776 66776 788 68999999999998764
No 155
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.56 E-value=1.5e-07 Score=99.44 Aligned_cols=57 Identities=9% Similarity=0.085 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCe---EEEeeEEEEecCcCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGT---VDGFSHVMFATGRRPN 344 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~---~i~~d~vi~a~G~~p~ 344 (551)
.+.+.+.+.+++.|++++++++|++++.++++ ++|++.+++ ++.+|.||.|.|.+..
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAG-VTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-EEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 45677788888889999999999999988776 677777664 7999999999999764
No 156
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.55 E-value=4.1e-08 Score=101.93 Aligned_cols=57 Identities=11% Similarity=0.148 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEE-cCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILK-STDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
.++.+.+.+.+++.|++++++++|++|.. +++++..|++.+|+++.||.||++++..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 57888999999999999999999999998 4455567999999899999999999988
No 157
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.55 E-value=4.6e-07 Score=96.92 Aligned_cols=59 Identities=19% Similarity=0.245 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhc-CcEEEcCcccEEEEEcCCc-eEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 286 EDIRDFVAEQMSLR-GIEFHTEESPQAILKSTDG-SLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 286 ~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~-~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
..+.+.+.+.+++. |++++.+ +|+++..++++ .+.|.+.+|+++.+|.||.|+|..+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 35778888888888 9999999 99999875543 467888899889999999999997755
No 158
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.55 E-value=7e-07 Score=88.97 Aligned_cols=96 Identities=19% Similarity=0.157 Sum_probs=80.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC---------------CCC----CHHHHHHHHHHHHhcCcEEEcC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL---------------RGF----DEDIRDFVAEQMSLRGIEFHTE 306 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l---------------~~~----~~~~~~~l~~~l~~~Gv~i~~~ 306 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.+.+.+.+++.+++++.+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 579999999999999999999999999999876431 111 2456677778888889999999
Q ss_pred cccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 307 ESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 307 ~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
++|.+++.+++. +.|.+.+|+++.+|.||+|+|..
T Consensus 86 ~~v~~i~~~~~~-~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGDL-FKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETTE-EEEEETTSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCCE-EEEEECCCCEEEeCEEEECCCCC
Confidence 999999887654 77888888889999999999994
No 159
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.54 E-value=8.8e-07 Score=89.28 Aligned_cols=98 Identities=20% Similarity=0.219 Sum_probs=81.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC---------------CCC----CHHHHHHHHHHHHhcCcEEEcC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL---------------RGF----DEDIRDFVAEQMSLRGIEFHTE 306 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l---------------~~~----~~~~~~~l~~~l~~~Gv~i~~~ 306 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.+.+.+.+++.|++++.+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 94 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLN 94 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcC
Confidence 589999999999999999999999999999875431 111 1566777788888889999999
Q ss_pred cccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 307 ESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 307 ~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
++|++++.++++.+.|.+.+|+++.+|.||+|+|..+
T Consensus 95 ~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 95 ETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp CCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred CEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 9999998876534788899998899999999999954
No 160
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.54 E-value=3e-07 Score=97.02 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCe---EEEeeEEEEecCcCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGT---VDGFSHVMFATGRRPN 344 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~---~i~~d~vi~a~G~~p~ 344 (551)
.+.+.+.+.+++.|++++++++|++++.++++ +.|++.+++ ++.+|.||.|.|.+..
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDH-VVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-EEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 45677788888889999999999999988777 778887764 7999999999999764
No 161
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.52 E-value=1.3e-06 Score=89.81 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHh-cC-cEEEcCcccEEEEEcCCceEEEEECC---C--eEEEeeEEEEecCcCCCC
Q 008841 287 DIRDFVAEQMSL-RG-IEFHTEESPQAILKSTDGSLSVKTNK---G--TVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 287 ~~~~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~~~~V~~~~---G--~~i~~d~vi~a~G~~p~~ 345 (551)
.+.+.+.+.+++ .| ++++++++|++++. +++ +.|.+.+ | +++.+|.||.|.|..+..
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~v 171 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RVLIGARDGHGKPQALGADVLVGADGIHSAV 171 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EEEEEEEETTSCEEEEEESEEEECCCTTCHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cEEEEecCCCCCceEEecCEEEECCCccchh
Confidence 456667777766 36 68999999999988 556 6677654 7 579999999999987654
No 162
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.51 E-value=8.4e-07 Score=86.56 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=79.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc---------CCC----CCHHHHHHHHHHHHhc-CcEEEcCcccEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV---------LRG----FDEDIRDFVAEQMSLR-GIEFHTEESPQA 311 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~---------l~~----~~~~~~~~l~~~l~~~-Gv~i~~~~~v~~ 311 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ++. ...++...+.+.+++. +++++.+ +|++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 47999999999999999999999999999974321 111 1235667777778776 7888755 9999
Q ss_pred EEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 312 ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 312 i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
++.++++ ..|.+.+|+++.+|.||+|+|..|...
T Consensus 82 i~~~~~~-~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFGE-FIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETTE-EEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCCe-EEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 9887665 788999998999999999999988654
No 163
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.50 E-value=1.7e-07 Score=98.19 Aligned_cols=41 Identities=10% Similarity=0.108 Sum_probs=36.8
Q ss_pred cEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 301 IEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 301 v~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
++|+++++|++|+.++++ +.|++.+|+++.+|.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~~-~~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC-YSLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSSS-EEEEESSSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCCe-EEEEECCCCEEECCEEEECCCHH
Confidence 799999999999988777 88999999889999999999753
No 164
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.50 E-value=4.7e-07 Score=90.14 Aligned_cols=100 Identities=20% Similarity=0.216 Sum_probs=81.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC----cc------------CCCC-----CHHHHHHHHHHHHhcCcEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK----KV------------LRGF-----DEDIRDFVAEQMSLRGIEF 303 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~----~~------------l~~~-----~~~~~~~l~~~l~~~Gv~i 303 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ ++.+ ..++...+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 4689999999999999999999999999999843 11 1122 2467788888999999999
Q ss_pred EcCcccEEEEEcCCceEEEEE---CCCeEEEeeEEEEecCcCCCCC
Q 008841 304 HTEESPQAILKSTDGSLSVKT---NKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 304 ~~~~~v~~i~~~~~~~~~V~~---~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
+.++ |.+++.+++. +.+.+ .++..+.+|.+|+|+|..|...
T Consensus 102 ~~~~-v~~i~~~~~~-~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 102 ITET-VSKVDLSSKP-FKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp ECSC-EEEEECSSSS-EEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEeE-EEEEEEcCCE-EEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 9997 9999877665 66776 4677899999999999988754
No 165
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.49 E-value=1.1e-06 Score=86.65 Aligned_cols=98 Identities=20% Similarity=0.203 Sum_probs=79.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCC-eEEEEeecCc-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEcCccc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTS-EVHVFIRQKK-----------VLRGF-----DEDIRDFVAEQMSLRGIEFHTEESP 309 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~-~Vtlv~~~~~-----------~l~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v 309 (551)
+|+|||+|+.|+.+|..|++.|. +|+++++... ..+.+ ..++.+.+.+.+++.|++++. ++|
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999998521 01222 245667778888889999998 689
Q ss_pred EEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 310 QAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 310 ~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.+++.+++. +.|.+.+|+++.+|.||+|+|..|...
T Consensus 82 ~~i~~~~~~-~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 82 QRVSKKDSH-FVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp EEEEEETTE-EEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEcCCE-EEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 999876654 678788888899999999999988654
No 166
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.49 E-value=8.4e-07 Score=91.10 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=42.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccE---------EEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQ---------AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~---------~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
...+...+.+.+++.|++++.+++|+ ++..++++ +.|.+.+| ++.+|.||+|+|...
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~-v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTH-QIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCe-EEEEECCc-EEECCEEEECCCccH
Confidence 34577888888999999999999999 88765555 56767666 699999999999865
No 167
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.47 E-value=1.3e-06 Score=85.96 Aligned_cols=33 Identities=33% Similarity=0.374 Sum_probs=30.6
Q ss_pred CCccEEEECCChHHHHHHHHHHhC--CCcEEEEcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANF--GASVAICEL 103 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~ 103 (551)
.++||+|||||++|+++|..|++. |++|+|+|+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~ 98 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEec
Confidence 358999999999999999999997 999999993
No 168
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.46 E-value=9.3e-07 Score=94.32 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=30.9
Q ss_pred CCccEEEECCChHHHHHHHHHHh---CCCcEEEEcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAAN---FGASVAICEL 103 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~---~G~~V~liE~ 103 (551)
..+||+|||||++|+++|+.|++ .|.+|+|||+
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 39 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIES 39 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 35899999999999999999999 9999999993
No 169
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.45 E-value=4.5e-06 Score=89.97 Aligned_cols=59 Identities=14% Similarity=0.066 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE---CCCe--EEEeeEEEEecCcCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT---NKGT--VDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~---~~G~--~i~~d~vi~a~G~~p~ 344 (551)
..+...+.+.+++.||+++.++.|.++..+++.+..|.. .+|+ .+.++.||+|+|....
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 356677777888899999999999999876554444544 4675 6899999999997653
No 170
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.45 E-value=1.2e-06 Score=89.57 Aligned_cols=98 Identities=18% Similarity=0.165 Sum_probs=79.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC--------------CC----------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL--------------RG---------------------------- 283 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l--------------~~---------------------------- 283 (551)
.+|+|||+|+.|+.+|..+++.|.+|+++++.+.+. ..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 369999999999999999999999999999876430 00
Q ss_pred ----------------------CCHHHHHHHHHHHHhcCcEEEcCcccEEEEEc----CCceEEEEECCCeEEEeeEEEE
Q 008841 284 ----------------------FDEDIRDFVAEQMSLRGIEFHTEESPQAILKS----TDGSLSVKTNKGTVDGFSHVMF 337 (551)
Q Consensus 284 ----------------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~----~~~~~~V~~~~G~~i~~d~vi~ 337 (551)
...++.+.+.+.+++.|++++++++|+++..+ +++ +.|.+.+| ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 12344566778888899999999999999876 444 77888777 699999999
Q ss_pred ecCcCCCC
Q 008841 338 ATGRRPNT 345 (551)
Q Consensus 338 a~G~~p~~ 345 (551)
|+|..+..
T Consensus 163 AtG~~s~p 170 (401)
T 2gqf_A 163 ATGGLSMP 170 (401)
T ss_dssp CCCCSSCG
T ss_pred CCCCccCC
Confidence 99998854
No 171
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.44 E-value=5.6e-07 Score=91.65 Aligned_cols=99 Identities=19% Similarity=0.214 Sum_probs=78.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC---CCCC---------HHHHHHHHHHHHhcCcEEEcCcccEEEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL---RGFD---------EDIRDFVAEQMSLRGIEFHTEESPQAIL 313 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l---~~~~---------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 313 (551)
.+|+|||+|+.|+.+|..|...+.+|+++++.+.+. +.+. .++.....+.+++.||+++++++|++++
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id 89 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSID 89 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEE
Confidence 479999999999999999988889999999877531 1011 1122224566788999999999999998
Q ss_pred EcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 314 KSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 314 ~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
.+.. .|++.+|+++.+|.+|+|||.+|....
T Consensus 90 ~~~~---~v~~~~g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 90 PNNK---LVTLKSGEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp TTTT---EEEETTSCEEECSEEEECCCEEECCCC
T ss_pred CCCC---EEEECCCCEEECCEEEEecCCCcCCCC
Confidence 6653 478899999999999999999887643
No 172
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.44 E-value=1.5e-06 Score=88.37 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=30.6
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
.+||+|||||++|+++|..|++.|.+|+|||+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 58999999999999999999999999999993
No 173
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.43 E-value=1e-06 Score=93.11 Aligned_cols=59 Identities=17% Similarity=0.093 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE---CCCe--EEEeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT---NKGT--VDGFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~---~~G~--~i~~d~vi~a~G~~p~ 344 (551)
+..+...+.+.+++.|++++.+++|+++..+++ ...|.+ .+|+ ++.+|.||+|+|....
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCC-EEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 456778888889999999999999999987663 366766 3565 6899999999998653
No 174
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.41 E-value=1.3e-06 Score=85.87 Aligned_cols=100 Identities=14% Similarity=0.147 Sum_probs=79.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC--ccC--------CC----CCHHHHHHHHHHHHhcCcEEEcCcccEEE
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK--KVL--------RG----FDEDIRDFVAEQMSLRGIEFHTEESPQAI 312 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~--~~l--------~~----~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i 312 (551)
+|+|||+|+.|+.+|..|++.|.+|+++++.. .+. .. ..+++.+.+.+.+++.|++++.+++|..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999997531 110 00 12466777888888899999999999999
Q ss_pred EEcCC--ceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 313 LKSTD--GSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 313 ~~~~~--~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
..+.+ +...|.+.+|+++.+|.+|+|+|..|...
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 76432 23778888898899999999999987653
No 175
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.41 E-value=2.7e-06 Score=85.92 Aligned_cols=98 Identities=13% Similarity=0.188 Sum_probs=77.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCC-eEEEEeecC------c------cC-CC----------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTS-EVHVFIRQK------K------VL-RG---------------------------- 283 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~-~Vtlv~~~~------~------~l-~~---------------------------- 283 (551)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ . ++ +.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999999875 0 00 00
Q ss_pred CC-HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 284 FD-EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 284 ~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
.. .++...+.+.+++.|++++++++|.+++.++++ +.|.+.+| ++.+|.||+|+|..+..
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-YTIATTTE-TYHADYIFVATGDYNFP 145 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESSC-CEEEEEEEECCCSTTSB
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-EEEEeCCC-EEEeCEEEECCCCCCcc
Confidence 00 234556677778899999999999999887655 77888777 49999999999998653
No 176
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.40 E-value=1.8e-06 Score=87.76 Aligned_cols=97 Identities=14% Similarity=0.181 Sum_probs=79.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-----------------------------------------
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG----------------------------------------- 283 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 283 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 358999999999999999999999999999987654210
Q ss_pred ---CC-----------HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 284 ---FD-----------EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 284 ---~~-----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
++ ..+.+.+.+.+++.|++++++++|++++. ++ .|++.+|+++.+|.||.|+|..+..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~--~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG--RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT--EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC--EEEECCCCEEEcCEEEECCCccHHH
Confidence 00 34466677888889999999999999986 33 6788899899999999999998754
No 177
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.39 E-value=1.9e-06 Score=85.54 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=79.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEcCccc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK-----------VLRGF-----DEDIRDFVAEQMSLRGIEFHTEESP 309 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~-----------~l~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v 309 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 4799999999999999999999999999998721 01122 235667778888899999987 589
Q ss_pred EEEEEc--CCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 310 QAILKS--TDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 310 ~~i~~~--~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.+++.+ ++..+.|.+.+|+++.+|.||+|+|..|...
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp EEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 999876 3322456777888899999999999987654
No 178
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.39 E-value=1.2e-06 Score=87.30 Aligned_cols=98 Identities=19% Similarity=0.149 Sum_probs=78.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEee----cCcc------------CCCC-----CHHHHHHHHHHHHhcCcEEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIR----QKKV------------LRGF-----DEDIRDFVAEQMSLRGIEFH 304 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~----~~~~------------l~~~-----~~~~~~~l~~~l~~~Gv~i~ 304 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+ .+.+ ..++.+.+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4799999999999999999999999999998 2211 1111 23566777888889999999
Q ss_pred cCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 305 TEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 305 ~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.++ +..++.+++. +.|.+ +|+++.+|.||+|+|.+|...
T Consensus 89 ~~~-v~~i~~~~~~-~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 89 TET-VTKVDFSSKP-FKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp CCC-CCEEECSSSS-EEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred EeE-EEEEEEcCCE-EEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 986 9999876655 66777 778899999999999987654
No 179
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.39 E-value=9.5e-06 Score=86.21 Aligned_cols=58 Identities=12% Similarity=0.143 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHh-cCcEEEcCcccEEEEEcCCc-eEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 287 DIRDFVAEQMSL-RGIEFHTEESPQAILKSTDG-SLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 287 ~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~-~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
.+.+.+.+.+++ .|++++.+ +|++++.++++ .+.|.+.+|+++.+|.||.|+|..+..
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 456777888888 89999999 69999876554 356888887789999999999998764
No 180
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.38 E-value=1.6e-06 Score=88.66 Aligned_cols=99 Identities=20% Similarity=0.162 Sum_probs=80.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC-------------------------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR------------------------------------------- 282 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 282 (551)
.+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998653300
Q ss_pred --C--------------C-CHHHHHHHHHHHHhc-CcEEEcCcccEEEEEcCCceE--EEEECCCeEEEeeEEEEecCcC
Q 008841 283 --G--------------F-DEDIRDFVAEQMSLR-GIEFHTEESPQAILKSTDGSL--SVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 283 --~--------------~-~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~--~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
. . ...+.+.+.+.+++. |++++++++|++++.++++ + .|++.+|+++.+|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCC
Confidence 0 0 013445566777777 9999999999999987776 5 7889999889999999999997
Q ss_pred CCC
Q 008841 343 PNT 345 (551)
Q Consensus 343 p~~ 345 (551)
+..
T Consensus 166 s~v 168 (399)
T 2x3n_A 166 SYV 168 (399)
T ss_dssp CHH
T ss_pred hHH
Confidence 753
No 181
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.37 E-value=3.4e-07 Score=95.01 Aligned_cols=98 Identities=19% Similarity=0.239 Sum_probs=78.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---CCCeEEEEeecCccC--CC---------CCHHHHHHHHHHHHhcCcEEEcCcccEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSG---LTSEVHVFIRQKKVL--RG---------FDEDIRDFVAEQMSLRGIEFHTEESPQA 311 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~---~g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 311 (551)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. +. ...++...+.+.+++.||+++. .+|+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 799999999987642 10 1122333356778889999985 59999
Q ss_pred EEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 312 ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 312 i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
++.+++ .|.+.+|+++.+|.+|+|+|.+|+...
T Consensus 84 id~~~~---~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDAEAQ---NITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EETTTT---EEEETTSCEEECSEEEECCCCEECGGG
T ss_pred EEcCCC---EEEECCCCEEECCEEEECCCCCcCccc
Confidence 976554 478889988999999999999987643
No 182
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.37 E-value=5.9e-06 Score=87.51 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCc-eEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDG-SLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
..+.+.+.+.+++.|++++.+ +|+++..++++ .+.|.+.+|+++.+|.||.|+|.....
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 356677888888899999999 99999875544 467888899889999999999997654
No 183
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.36 E-value=3.1e-06 Score=83.15 Aligned_cols=101 Identities=17% Similarity=0.220 Sum_probs=74.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc----------cC--CC-CCHHHHHHHHHHHHhcCcEEEcCcccEEEE
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK----------VL--RG-FDEDIRDFVAEQMSLRGIEFHTEESPQAIL 313 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~----------~l--~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 313 (551)
.|+|||+|+.|+.+|..+++.|.+|+++++... +. +. ..+++.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 589999999999999999999999999997531 11 01 124455555555666554444555677776
Q ss_pred EcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 314 KSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 314 ~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
..+++...+.+.+|+++.+|.||+|||.+|....
T Consensus 88 ~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~ 121 (304)
T 4fk1_A 88 KQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPS 121 (304)
T ss_dssp ECTTSCEEEEETTCCEEEEEEEEECCCCEEECCS
T ss_pred ecCCCcEEEEECCCCEEEeCEEEEccCCcccccc
Confidence 6555557889999999999999999999886543
No 184
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.35 E-value=2.7e-06 Score=90.68 Aligned_cols=101 Identities=17% Similarity=0.236 Sum_probs=81.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC--------C-------------CC----------------CHHH
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL--------R-------------GF----------------DEDI 288 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l--------~-------------~~----------------~~~~ 288 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .+ .+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 479999999999999999999999999999865321 0 01 1356
Q ss_pred HHHHHHHHHhcCc--EEEcCcccEEEEEcCC-ceEEEEECCCeEEEeeEEEEecC--cCCCCC
Q 008841 289 RDFVAEQMSLRGI--EFHTEESPQAILKSTD-GSLSVKTNKGTVDGFSHVMFATG--RRPNTK 346 (551)
Q Consensus 289 ~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~-~~~~V~~~~G~~i~~d~vi~a~G--~~p~~~ 346 (551)
.+.+.+.+++.|+ +++++++|++++.+++ +.+.|++.+|+++.+|.||+|+| ..|...
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 6777788888888 8999999999987654 34789999999999999999999 555543
No 185
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.35 E-value=3.6e-06 Score=91.44 Aligned_cols=58 Identities=14% Similarity=0.116 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE---CCCe--EEEeeEEEEecCcCC
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT---NKGT--VDGFSHVMFATGRRP 343 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~---~~G~--~i~~d~vi~a~G~~p 343 (551)
..+...+.+.+++.||+++.++.|.++..+++.+..|.. .+|+ .+.++.||+|+|...
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 356677778888889999999999999876554344443 5675 489999999999754
No 186
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.35 E-value=5.1e-06 Score=88.33 Aligned_cols=100 Identities=18% Similarity=0.202 Sum_probs=81.0
Q ss_pred CeEEEEcCcHHHHHHHHHHH-hCCCeEEEEeecCccC--------CC-------------C----------------CHH
Q 008841 246 EKIAIVGGGYIALEFAGIFS-GLTSEVHVFIRQKKVL--------RG-------------F----------------DED 287 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~-~~g~~Vtlv~~~~~~l--------~~-------------~----------------~~~ 287 (551)
.+|+|||+|+.|+.+|..|+ +.|.+|+++++.+.+. +. + .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 9999999999865321 00 1 235
Q ss_pred HHHHHHHHHHhcCc--EEEcCcccEEEEEcCC-ceEEEEECCCeEEEeeEEEEecCc--CCCC
Q 008841 288 IRDFVAEQMSLRGI--EFHTEESPQAILKSTD-GSLSVKTNKGTVDGFSHVMFATGR--RPNT 345 (551)
Q Consensus 288 ~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~-~~~~V~~~~G~~i~~d~vi~a~G~--~p~~ 345 (551)
+.+.+.+.+++.|+ +++++++|++++.+++ +.+.|++.+|+++.+|.||+|+|. .|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 66677788888898 8999999999987665 347899999999999999999995 5544
No 187
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.34 E-value=2.4e-07 Score=96.01 Aligned_cols=97 Identities=21% Similarity=0.229 Sum_probs=74.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCC--CeEEEEeecCccCC--C--------C-CHHHHHHHHHHHHhcCcEEEcCcccEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLT--SEVHVFIRQKKVLR--G--------F-DEDIRDFVAEQMSLRGIEFHTEESPQA 311 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g--~~Vtlv~~~~~~l~--~--------~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 311 (551)
.|+|+|||+|+.|+.+|..|++++ .+|+++++.+.+.- . . .+++...+.+.+++.||+++.+ +|++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~ 80 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEE
Confidence 478999999999999999999875 68999999875321 0 1 1111222345667889999877 8999
Q ss_pred EEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 312 ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 312 i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
|+.+.+ +|++.+|+++++|.+|+|||.++..
T Consensus 81 Id~~~~---~V~~~~g~~i~YD~LViAtG~~~~~ 111 (430)
T 3hyw_A 81 IDPDAN---TVTTQSGKKIEYDYLVIATGPKLVF 111 (430)
T ss_dssp EETTTT---EEEETTCCEEECSEEEECCCCEEEC
T ss_pred EECCCC---EEEECCCCEEECCEEEEeCCCCccC
Confidence 987654 4889999999999999999987643
No 188
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.34 E-value=2.1e-06 Score=89.27 Aligned_cols=100 Identities=21% Similarity=0.183 Sum_probs=77.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCC--eEEEEeecCccCCC---------------------------------------
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTS--EVHVFIRQKKVLRG--------------------------------------- 283 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~--~Vtlv~~~~~~l~~--------------------------------------- 283 (551)
..+|+|||+|+.|+.+|..|++.|. +|+++++.+.+...
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4689999999999999999999999 99999987532100
Q ss_pred -------------C--------------CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECC---Ce---EE
Q 008841 284 -------------F--------------DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNK---GT---VD 330 (551)
Q Consensus 284 -------------~--------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~---G~---~i 330 (551)
+ ..++.+.+.+.+++.++.++++++|++++.++++ +.|++.+ |+ ++
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~-~~V~~~~~~~G~~~~~~ 164 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS-WVVTYKGTKAGSPISKD 164 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE-EEEEEEESSTTCCEEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe-EEEEEeecCCCCeeEEE
Confidence 0 0134455666666778889999999999887654 6676654 66 79
Q ss_pred EeeEEEEecCc--CCCC
Q 008841 331 GFSHVMFATGR--RPNT 345 (551)
Q Consensus 331 ~~d~vi~a~G~--~p~~ 345 (551)
.+|.||+|+|. .|+.
T Consensus 165 ~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 165 IFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EESEEEECCCSSSSBCB
T ss_pred EeCEEEECCCCCCCCCC
Confidence 99999999999 5554
No 189
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.30 E-value=3.3e-06 Score=86.36 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=30.6
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
++||+|||||++|+++|..|++.|++|+|||+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~ 37 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQ 37 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence 48999999999999999999999999999994
No 190
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.30 E-value=6.2e-06 Score=88.39 Aligned_cols=59 Identities=14% Similarity=0.043 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEEC---CCe--EEEeeEEEEecCcCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN---KGT--VDGFSHVMFATGRRP 343 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G~--~i~~d~vi~a~G~~p 343 (551)
+..+...+.+.+++.|++++.+++|+++..+++++..|.+. +|+ ++.+|.||+|+|...
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 45666777788889999999999999998876654456542 343 699999999999764
No 191
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.30 E-value=9e-06 Score=88.38 Aligned_cols=56 Identities=18% Similarity=0.159 Sum_probs=41.9
Q ss_pred HHHHHHHHHhc-Cc-EEEcCcccEEEEEcCC---ceEEEEE---CCCe--EEEeeEEEEecCcCCC
Q 008841 289 RDFVAEQMSLR-GI-EFHTEESPQAILKSTD---GSLSVKT---NKGT--VDGFSHVMFATGRRPN 344 (551)
Q Consensus 289 ~~~l~~~l~~~-Gv-~i~~~~~v~~i~~~~~---~~~~V~~---~~G~--~i~~d~vi~a~G~~p~ 344 (551)
...+.+.+++. || +++.++.|+++..+++ .+..|.. .+|+ .+.++.||+|+|....
T Consensus 154 ~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 154 KPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp HHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 44556666666 99 9999999999987665 5444443 5665 5899999999997654
No 192
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.29 E-value=4.9e-06 Score=82.19 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=77.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc-----------cCCC----CCHHHHHHHHHHHHhcCcEEEcCcccE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK-----------VLRG----FDEDIRDFVAEQMSLRGIEFHTEESPQ 310 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~-----------~l~~----~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 310 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+. ...++.+.+.+.+++.|++++. .++.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 4799999999999999999999999999998421 0111 1245667777888889999998 6899
Q ss_pred EEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 311 AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 311 ~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
+++.+++. +.|.+ +++++.+|.+|+|+|..|...
T Consensus 96 ~i~~~~~~-~~v~~-~~~~~~~~~li~AtG~~~~~~ 129 (319)
T 3cty_A 96 SIKKTQGG-FDIET-NDDTYHAKYVIITTGTTHKHL 129 (319)
T ss_dssp EEEEETTE-EEEEE-SSSEEEEEEEEECCCEEECCC
T ss_pred EEEEeCCE-EEEEE-CCCEEEeCEEEECCCCCcccC
Confidence 99876654 56766 556799999999999987654
No 193
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.28 E-value=1.4e-06 Score=90.81 Aligned_cols=34 Identities=21% Similarity=0.409 Sum_probs=31.5
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
.+++||+|||||++|+++|+.|++.|++|+|||+
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~ 37 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDS 37 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 3468999999999999999999999999999994
No 194
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.27 E-value=4e-06 Score=82.81 Aligned_cols=98 Identities=12% Similarity=0.055 Sum_probs=77.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEcCccc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK-----------VLRGF-----DEDIRDFVAEQMSLRGIEFHTEESP 309 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~-----------~l~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v 309 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ .+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 4799999999999999999999999999986320 01112 24666777888889999999985 8
Q ss_pred EEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 310 QAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 310 ~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
..++.+++. +.+ +.+++++.+|.+|+|+|..|...
T Consensus 85 ~~i~~~~~~-~~v-~~~~~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 85 NKVDLQNRP-FRL-NGDNGEYTCDALIIATGASARYL 119 (320)
T ss_dssp EEEECSSSS-EEE-EESSCEEEEEEEEECCCEEECCC
T ss_pred eEEEecCCE-EEE-EeCCCEEEcCEEEECCCCCcCCC
Confidence 888776555 556 66778899999999999987654
No 195
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.27 E-value=7e-06 Score=81.64 Aligned_cols=99 Identities=21% Similarity=0.321 Sum_probs=74.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc--------------------CCCCCHHHHHHHH------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV--------------------LRGFDEDIRDFVA------------ 293 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~--------------------l~~~~~~~~~~l~------------ 293 (551)
.+|+|||+|.+|+.+|..|++.|.+|+++++.+.+ +....+.+.+.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999987532 1111222322222
Q ss_pred -------------------------------HHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEE-eeEEEEecCc
Q 008841 294 -------------------------------EQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDG-FSHVMFATGR 341 (551)
Q Consensus 294 -------------------------------~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~-~d~vi~a~G~ 341 (551)
+.+. .|++++++++|++++.++++ +.|++.+|+.+. +|.||+|+|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~a~~vV~a~g~ 160 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH-WNLLDAEGQNHGPFSHVIIATPA 160 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC-EEEEETTSCEEEEESEEEECSCH
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE-EEEEeCCCcCccccCEEEEcCCH
Confidence 2222 28899999999999988777 788899998664 9999999997
Q ss_pred CCCCC
Q 008841 342 RPNTK 346 (551)
Q Consensus 342 ~p~~~ 346 (551)
.....
T Consensus 161 ~~~~~ 165 (336)
T 1yvv_A 161 PQAST 165 (336)
T ss_dssp HHHGG
T ss_pred HHHHH
Confidence 65433
No 196
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.27 E-value=4.4e-07 Score=93.35 Aligned_cols=97 Identities=20% Similarity=0.278 Sum_probs=75.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---CCCeEEEEeecCccCC---------C--CCHHHHHHHHHHHHhcCcEEEcCcccEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSG---LTSEVHVFIRQKKVLR---------G--FDEDIRDFVAEQMSLRGIEFHTEESPQA 311 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~---~g~~Vtlv~~~~~~l~---------~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 311 (551)
++|+|||+|+.|+++|..|++ .|.+|+++++.+.+.. . ...++...+.+.+++.|++++.+ +|++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 8999999998875421 1 12334455777888899999988 8999
Q ss_pred EEEcCCceEEEEECCCe----EEEeeEEEEecCcCCCCC
Q 008841 312 ILKSTDGSLSVKTNKGT----VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 312 i~~~~~~~~~V~~~~G~----~i~~d~vi~a~G~~p~~~ 346 (551)
++.+++. |.+.+++ ++.+|.||+|+|.+|+..
T Consensus 81 i~~~~~~---V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAKSSM---VYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETTTTE---EEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCCCCE---EEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 8765543 5554554 489999999999988764
No 197
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.27 E-value=4e-06 Score=85.70 Aligned_cols=100 Identities=19% Similarity=0.284 Sum_probs=77.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC------CCHHHHH----------------------------
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG------FDEDIRD---------------------------- 290 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~------~~~~~~~---------------------------- 290 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653111 1222111
Q ss_pred ---------------HHHHHHHh--cCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 291 ---------------FVAEQMSL--RGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 291 ---------------~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
.+.+.|.+ .|++++++++|++++.++++ +.|++.+|+++.+|.||.|.|..+..
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET-VQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-EEEEETTSCEEEESEEEECCCTTCHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-EEEEECCCCEEECCEEEECCCcchhH
Confidence 12223322 38899999999999987776 78999999899999999999997653
No 198
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.27 E-value=1.7e-06 Score=89.57 Aligned_cols=100 Identities=17% Similarity=0.246 Sum_probs=76.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCC--eEEEEeecCccCC-------CC------CHHHHHHHHHHHHhcCcEEEcCccc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTS--EVHVFIRQKKVLR-------GF------DEDIRDFVAEQMSLRGIEFHTEESP 309 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~--~Vtlv~~~~~~l~-------~~------~~~~~~~l~~~l~~~Gv~i~~~~~v 309 (551)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.- .+ ...+.....+.+++.|++++.+++|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 3689999999999999999999998 7999998654210 00 0111111245677889999999999
Q ss_pred EEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 310 QAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 310 ~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
+.++.++. .|.+.+|+++.+|.+|+|+|.+|+...
T Consensus 84 ~~i~~~~~---~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINRDRQ---QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEETTTT---EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEEECCCC---EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 99976543 477788888999999999999987643
No 199
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.26 E-value=8.6e-06 Score=86.77 Aligned_cols=33 Identities=33% Similarity=0.603 Sum_probs=31.1
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
.++||+|||||++|+++|+.|++.|.+|+|||+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr 36 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVER 36 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 358999999999999999999999999999994
No 200
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.26 E-value=4.9e-06 Score=81.80 Aligned_cols=98 Identities=19% Similarity=0.214 Sum_probs=75.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEE-EeecCc---c--------CCCCC-----HHHHHHHHHHHHhcCcEEEcCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHV-FIRQKK---V--------LRGFD-----EDIRDFVAEQMSLRGIEFHTEES 308 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtl-v~~~~~---~--------l~~~~-----~~~~~~l~~~l~~~Gv~i~~~~~ 308 (551)
.+|+|||+|+.|+.+|..|++.|.+|++ +++... + .+.++ .++...+.+.+++.|++++.+ +
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 83 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV-G 83 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-C
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-E
Confidence 5899999999999999999999999999 887320 0 12222 567788888899999999998 8
Q ss_pred cEEEEEcC--CceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 309 PQAILKST--DGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 309 v~~i~~~~--~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
|.++ .++ +. +.+.+.++.++.+|.+|+|+|..|+..
T Consensus 84 v~~i-~~~~~~~-~~v~~~~~~~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 84 VEQI-LKNSDGS-FTIKLEGGKTELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp EEEE-EECTTSC-EEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEE-ecCCCCc-EEEEEecCCEEEeCEEEEeeCCCCCCC
Confidence 9998 554 44 554233222899999999999988654
No 201
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.26 E-value=4.8e-06 Score=85.15 Aligned_cols=34 Identities=24% Similarity=0.372 Sum_probs=31.7
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
+.++||+|||||++|+++|..|++.|.+|+|||+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 3468999999999999999999999999999994
No 202
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.26 E-value=3.9e-06 Score=87.66 Aligned_cols=101 Identities=19% Similarity=0.318 Sum_probs=77.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---CCCe---EEEEeecCccCC-------------------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSG---LTSE---VHVFIRQKKVLR------------------------------------- 282 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~---~g~~---Vtlv~~~~~~l~------------------------------------- 282 (551)
++|+|||+|+.|+.+|..|.+ .|.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 999998754210
Q ss_pred CC---------------CHHHHHHHHHHHHhcCcE--EEcCcccEEEEEcCC-ceEEEEECC---C--eEEEeeEEEEec
Q 008841 283 GF---------------DEDIRDFVAEQMSLRGIE--FHTEESPQAILKSTD-GSLSVKTNK---G--TVDGFSHVMFAT 339 (551)
Q Consensus 283 ~~---------------~~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~-~~~~V~~~~---G--~~i~~d~vi~a~ 339 (551)
.+ ..++.+.+.+.+++.|++ ++++++|++++.+++ +...|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 134556677777888998 999999999987654 235666654 4 568999999999
Q ss_pred C--cCCCCC
Q 008841 340 G--RRPNTK 346 (551)
Q Consensus 340 G--~~p~~~ 346 (551)
| ..|+..
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 666654
No 203
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.26 E-value=3.2e-06 Score=86.93 Aligned_cols=97 Identities=19% Similarity=0.187 Sum_probs=76.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCe--EEEEeecCccCCCCCHHHHH-------------HHHHHHHhcCcEEEcCcccE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSE--VHVFIRQKKVLRGFDEDIRD-------------FVAEQMSLRGIEFHTEESPQ 310 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~--Vtlv~~~~~~l~~~~~~~~~-------------~l~~~l~~~Gv~i~~~~~v~ 310 (551)
++|+|||+|+.|+.+|..|++.|.+ |+++++.+.+.- ..+.+.. ...+.+++.|++++.+++++
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y-~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY-DRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB-CSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc-CCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 5899999999999999999999986 999998765311 1111111 12345678899999999999
Q ss_pred EEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 311 AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 311 ~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.++.+.. .|.+.+|+++.+|.+|+|||..|...
T Consensus 82 ~id~~~~---~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 82 ALDVQTR---TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EEETTTT---EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEECCCC---EEEECCCCEEECCEEEEccCCcccCC
Confidence 9976543 47888998999999999999988764
No 204
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.26 E-value=6.6e-07 Score=92.67 Aligned_cols=98 Identities=19% Similarity=0.197 Sum_probs=76.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHh--CCCeEEEEeecCccCCC-----------CCHHHHHHHHHHHHhcCcEEEcCcccEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSG--LTSEVHVFIRQKKVLRG-----------FDEDIRDFVAEQMSLRGIEFHTEESPQA 311 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~--~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 311 (551)
.++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+.-. ...++...+.+.+++.|++++.+ +++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEE
Confidence 3689999999999999999999 78999999998764210 11122222445667789999975 8999
Q ss_pred EEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 312 ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 312 i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
++.+.+ .|.+.+|+++.+|.+|+|+|.+|+..
T Consensus 81 id~~~~---~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 81 IDPDAN---TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp EETTTT---EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EECCCC---EEEECCCcEEECCEEEEcCCcccccC
Confidence 976543 47888888899999999999998764
No 205
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.25 E-value=1.7e-05 Score=86.19 Aligned_cols=57 Identities=18% Similarity=0.119 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhcCc--EEEcCcccEEEEEcCC---ceEEEEEC------CC--eEEEeeEEEEecCcCC
Q 008841 287 DIRDFVAEQMSLRGI--EFHTEESPQAILKSTD---GSLSVKTN------KG--TVDGFSHVMFATGRRP 343 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~---~~~~V~~~------~G--~~i~~d~vi~a~G~~p 343 (551)
.+.+.+.+.+++.|+ +++++++|++++.+++ ..++|++. +| +++.+|.||.|.|.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 456778888888877 9999999999988653 13666654 46 4799999999999754
No 206
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.25 E-value=5.5e-06 Score=87.84 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=81.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC--ccC-----------CC-CCHHHHHHHHHHHHhcCcEEEcCcccE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK--KVL-----------RG-FDEDIRDFVAEQMSLRGIEFHTEESPQ 310 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~--~~l-----------~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 310 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.. .+. +. ..+++...+.+.+++.|++++.+++|.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 4579999999999999999999999999997531 111 01 234677778888899999999999999
Q ss_pred EEEEcC--CceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 311 AILKST--DGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 311 ~i~~~~--~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.+..+. ++...|.+.+|+++.+|.||+|+|.+|...
T Consensus 292 ~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNM 329 (521)
T ss_dssp EEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCC
Confidence 997542 223778889998899999999999987643
No 207
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.23 E-value=1.2e-05 Score=85.78 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECC---C--eEEEeeEEEEecCcCCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNK---G--TVDGFSHVMFATGRRPN 344 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~---G--~~i~~d~vi~a~G~~p~ 344 (551)
.+.+.+.+.+++. ++++++|++++.++++ +++++.+ | +++.+|.||.|.|....
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v~v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDH-VRATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCE-EEEEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 3456666777666 8999999999988777 6666654 6 47999999999998764
No 208
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.23 E-value=4.8e-06 Score=82.99 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=78.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEcCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK-----------VLRGF-----DEDIRDFVAEQMSLRGIEFHTEES 308 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~-----------~l~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~ 308 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ .+++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 35899999999999999999999999999985310 01112 24666777788888999999986
Q ss_pred cEEEEEcCCceEEE-EECCCeEEEeeEEEEecCcCCCCC
Q 008841 309 PQAILKSTDGSLSV-KTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 309 v~~i~~~~~~~~~V-~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
+.+++. ++. +.| .+.+|+++.+|.||+|+|..|...
T Consensus 93 v~~i~~-~~~-~~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 93 VESVSL-HGP-LKSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp EEEEEC-SSS-SEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEe-CCc-EEEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 888876 333 556 778888899999999999988654
No 209
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.23 E-value=1.2e-06 Score=89.83 Aligned_cols=99 Identities=18% Similarity=0.141 Sum_probs=74.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCC--CeEEEEeecCccCCC----------CCHHHHHHHHHHHHhcCcEEEcCcccEEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLT--SEVHVFIRQKKVLRG----------FDEDIRDFVAEQMSLRGIEFHTEESPQAI 312 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g--~~Vtlv~~~~~~l~~----------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i 312 (551)
+|+|+|||+|+.|+.+|..|++.+ .+|+++++.+..... .+.+-...-.+.+.+.||+++.+ +|+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 689999999999999999998875 589999987753211 11110001123456789999877 79999
Q ss_pred EEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 313 LKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 313 ~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
+.+.+ .|.+.+|+++.+|.+|+|+|.+++...
T Consensus 81 d~~~~---~v~~~~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 81 DPDKK---LVKTAGGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp ETTTT---EEEETTSCEEECSEEEECCCEEECGGG
T ss_pred EccCc---EEEecccceeecceeeeccCCccccCC
Confidence 77654 478899999999999999999887643
No 210
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.22 E-value=1.6e-06 Score=89.05 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=76.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCC--eEEEEeecCccC-----------CC--CCHHHHHHHHHHHHhcCcEEEcCcccE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTS--EVHVFIRQKKVL-----------RG--FDEDIRDFVAEQMSLRGIEFHTEESPQ 310 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~--~Vtlv~~~~~~l-----------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 310 (551)
++|+|||+|+.|+.+|..|++.|. +|+++++.+.+. .. ...++.....+.+++.|++++. ++++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 899999876321 00 0111222345667889999999 8999
Q ss_pred EEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 311 AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 311 ~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.++.+.. .|.+.+|+++.+|.+|+|||.+|...
T Consensus 81 ~id~~~~---~v~~~~g~~~~~d~lvlAtG~~p~~~ 113 (404)
T 3fg2_P 81 SIDREGR---KLLLASGTAIEYGHLVLATGARNRML 113 (404)
T ss_dssp EEETTTT---EEEESSSCEEECSEEEECCCEEECCC
T ss_pred EEECCCC---EEEECCCCEEECCEEEEeeCCCccCC
Confidence 9976543 47888998999999999999987654
No 211
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=1.5e-06 Score=88.00 Aligned_cols=98 Identities=23% Similarity=0.285 Sum_probs=74.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC----------C-CC-HHHHHHHHHHHHhcCcEEEcCcccEEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR----------G-FD-EDIRDFVAEQMSLRGIEFHTEESPQAI 312 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~----------~-~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i 312 (551)
+.+++|||+|+.|+.+|..|++.| +|+++++.+.... . .+ .++.....+.+++.|++++.+++|+.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~i 86 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLI 86 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEE
Confidence 568999999999999999999999 9999998764211 0 11 112222346677889999999999999
Q ss_pred EEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 313 LKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 313 ~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
+.+. ..|. .+|+++.+|.+|+|||.+|....
T Consensus 87 d~~~---~~V~-~~g~~~~~d~lViATGs~p~~p~ 117 (367)
T 1xhc_A 87 DRGR---KVVI-TEKGEVPYDTLVLATGARAREPQ 117 (367)
T ss_dssp ETTT---TEEE-ESSCEEECSEEEECCCEEECCCC
T ss_pred ECCC---CEEE-ECCcEEECCEEEECCCCCCCCCC
Confidence 7654 2355 57778999999999999987643
No 212
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.22 E-value=6.6e-06 Score=87.57 Aligned_cols=101 Identities=12% Similarity=0.100 Sum_probs=79.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC-------------------------C---------C---CCHHH
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL-------------------------R---------G---FDEDI 288 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l-------------------------~---------~---~~~~~ 288 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + . ..+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 479999999999999999999999999999875320 0 0 12566
Q ss_pred HHHHHHHHHhcCc--EEEcCcccEEEEEcCC-ceEEEEECCCeEEEeeEEEEecC--cCCCCC
Q 008841 289 RDFVAEQMSLRGI--EFHTEESPQAILKSTD-GSLSVKTNKGTVDGFSHVMFATG--RRPNTK 346 (551)
Q Consensus 289 ~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~-~~~~V~~~~G~~i~~d~vi~a~G--~~p~~~ 346 (551)
.+.+.+..++.|+ .++++++|++++.+++ +...|++.+|+++.+|.||+|+| ..|+..
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---C
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCC
Confidence 6777778888888 7899999999987554 34789999999999999999999 555543
No 213
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.21 E-value=7.9e-06 Score=80.37 Aligned_cols=99 Identities=19% Similarity=0.162 Sum_probs=77.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc----------------CCCC-----CHHHHHHHHHHHHhcCcEEEc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV----------------LRGF-----DEDIRDFVAEQMSLRGIEFHT 305 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~----------------l~~~-----~~~~~~~l~~~l~~~Gv~i~~ 305 (551)
.|+|||+|+.|+.+|..+++.|.+|+++++.... .+.+ .+++.+.+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 6999999999999999999999999999875420 0111 245677788888899999887
Q ss_pred CcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 306 EESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 306 ~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
. .+..+....+. ..+.+.++.++.+|.+|+|||.+|....
T Consensus 86 ~-~v~~~~~~~~~-~~~~~~~~~~~~~~~liiATG~~~~~~~ 125 (314)
T 4a5l_A 86 E-TIDHVDFSTQP-FKLFTEEGKEVLTKSVIIATGATAKRMH 125 (314)
T ss_dssp C-CEEEEECSSSS-EEEEETTCCEEEEEEEEECCCEEECCCC
T ss_pred e-EEEEeecCCCc-eEEEECCCeEEEEeEEEEcccccccccC
Confidence 6 56666555544 6677888889999999999999887543
No 214
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.21 E-value=1e-05 Score=86.59 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=77.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc-cC-----------------------CC------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK-VL-----------------------RG------------------ 283 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~-~l-----------------------~~------------------ 283 (551)
-.|+|||+|..|+++|..+++.|.+|.++++... +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999998631 10 00
Q ss_pred ------------CC-HHHHHHHHHHHHh-cCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 284 ------------FD-EDIRDFVAEQMSL-RGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 284 ------------~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
.+ ..+...+.+.+++ .|++++ +++|+++..+++.+..|.+.+|.++.+|.||+|+|..+..
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 01 1345566777777 699994 6799999877666567889899889999999999987643
No 215
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.20 E-value=1.3e-05 Score=81.68 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=30.5
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
++||+|||||++|+++|..|++.|++|+|+|+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 33 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILER 33 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 48999999999999999999999999999993
No 216
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.19 E-value=3.5e-06 Score=86.73 Aligned_cols=98 Identities=20% Similarity=0.190 Sum_probs=77.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCe--EEEEeecCccC------C-C------CCHHHHHHHHHHHHhcCcEEEcCcccE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSE--VHVFIRQKKVL------R-G------FDEDIRDFVAEQMSLRGIEFHTEESPQ 310 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~--Vtlv~~~~~~l------~-~------~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 310 (551)
.+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+. . . ....+.....+.+++.|++++.++++.
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 89 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVV 89 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCEE
T ss_pred CcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEEE
Confidence 5899999999999999999999987 99999876421 0 0 112222334567788999999999999
Q ss_pred EEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 311 AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 311 ~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.++.+.. .|.+.+|+.+.+|.+|+|||..|...
T Consensus 90 ~id~~~~---~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 90 SLDPAAH---TVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp EEETTTT---EEEETTSCEEEEEEEEECCCEECCCC
T ss_pred EEECCCC---EEEECCCCEEEeeEEEEccCCccCCC
Confidence 9976543 47888998999999999999988764
No 217
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.18 E-value=7.2e-07 Score=94.49 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCc
Q 008841 286 EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGR 341 (551)
Q Consensus 286 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~ 341 (551)
..+.+.+.+.+++.|++++++++|++|..+++. +++.+|+++.+|.||+++..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~---v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT---VTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE---EEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE---EEEcCCCEEECCEEEECCCH
Confidence 456677888888999999999999999876643 67899999999999998754
No 218
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.15 E-value=2.4e-06 Score=85.06 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=30.3
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
++||+|||||+||+.||+.|++.|.+|+|||+
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~ 32 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEM 32 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEec
Confidence 37999999999999999999999999999994
No 219
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.13 E-value=3.6e-06 Score=87.59 Aligned_cols=98 Identities=23% Similarity=0.368 Sum_probs=71.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccC------CCC------CHHHHHHHHHHH-HhcCcEEEcCcccE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVL------RGF------DEDIRDFVAEQM-SLRGIEFHTEESPQ 310 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l------~~~------~~~~~~~l~~~l-~~~Gv~i~~~~~v~ 310 (551)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+. +.+ ..++.....+.+ ++.|++++.+++|+
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~ 83 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEVI 83 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEEE
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEEE
Confidence 6899999999999999999988 78999999987531 110 011111122333 67899999999999
Q ss_pred EEEEcCCceEEEEECCCe-EEEeeEEEEecCcCCCCC
Q 008841 311 AILKSTDGSLSVKTNKGT-VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 311 ~i~~~~~~~~~V~~~~G~-~i~~d~vi~a~G~~p~~~ 346 (551)
.++.+. ..|.+.+++ ++.+|.+|+|||.+|...
T Consensus 84 ~i~~~~---~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 84 EVDTGY---VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EECSSE---EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEecCC---CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 985432 557777774 799999999999988654
No 220
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.13 E-value=1.9e-06 Score=89.78 Aligned_cols=59 Identities=17% Similarity=0.047 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEc--CCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKS--TDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
...+.+.+.+.+++.|++++++++|++|..+ +++...|.+ +|+++.||.||+|+|..|.
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 3478888999999999999999999999887 555445666 5788999999999998764
No 221
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.13 E-value=9.1e-06 Score=82.88 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=77.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc------CC-------------------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV------LR------------------------------------- 282 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~------l~------------------------------------- 282 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987631 00
Q ss_pred -----------C-----CC-HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE-CCCe--EEEeeEEEEecCcC
Q 008841 283 -----------G-----FD-EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT-NKGT--VDGFSHVMFATGRR 342 (551)
Q Consensus 283 -----------~-----~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~-~~G~--~i~~d~vi~a~G~~ 342 (551)
. ++ ..+.+.+.+.+.+.|++++++++|++++.++++.+.|++ .+|+ ++.+|.||.|.|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFH 162 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCC
Confidence 0 01 234455666777789999999999999875432256776 6887 79999999999998
Q ss_pred CCC
Q 008841 343 PNT 345 (551)
Q Consensus 343 p~~ 345 (551)
+..
T Consensus 163 S~v 165 (394)
T 1k0i_A 163 GIS 165 (394)
T ss_dssp CST
T ss_pred cHH
Confidence 765
No 222
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.12 E-value=1.9e-05 Score=84.19 Aligned_cols=99 Identities=19% Similarity=0.288 Sum_probs=77.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc-cC-----------------------CC------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK-VL-----------------------RG------------------ 283 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~-~l-----------------------~~------------------ 283 (551)
-.|+|||+|..|+++|..+++.|.+|.++++... +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999998631 10 00
Q ss_pred ------------CC-HHHHHHHHHHHHh-cCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 284 ------------FD-EDIRDFVAEQMSL-RGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 284 ------------~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
.+ ..+.+.+.+.+++ .|++++ ++.|+++..+++.+..|.+.+|+++.+|.||+|+|..++.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 00 1244556677777 599995 6799999887766567899999899999999999987654
No 223
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.7e-06 Score=88.50 Aligned_cols=46 Identities=28% Similarity=0.416 Sum_probs=39.6
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhC-CCcEEEEccCCCCCCCCCCCCCCCeecc
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANF-GASVAICELPFSTISSETTGGVGGTCVL 122 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~~~~~~~~~~GG~~~~ 122 (551)
+|+.++||+|||||++|++||..|++. |++|+|+|+ ...+||.|..
T Consensus 3 ~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~---------~~~~GG~~~~ 49 (399)
T 1v0j_A 3 PMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLER---------RPHIGGNAYS 49 (399)
T ss_dssp -CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECS---------SSSSSGGGCE
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCeeee
Confidence 355579999999999999999999998 999999994 5678888753
No 224
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.11 E-value=2.2e-05 Score=83.94 Aligned_cols=99 Identities=14% Similarity=0.125 Sum_probs=76.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC------------------------CC-----------------
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL------------------------RG----------------- 283 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l------------------------~~----------------- 283 (551)
.-.|+|||+|..|+++|..+++.|.+|.++++.+..+ ..
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 3589999999999999999999999999999863100 00
Q ss_pred -------------CC-HHHHHHHHHHHHhc-CcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 284 -------------FD-EDIRDFVAEQMSLR-GIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 284 -------------~~-~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
.+ ..+...+.+.+++. |++++. ..|+++..+++.+..|.+.+|+++.+|.||+|+|..++
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 01 13455666777774 999964 58999887666644588899989999999999998755
No 225
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.10 E-value=3.7e-06 Score=87.59 Aligned_cols=100 Identities=16% Similarity=0.222 Sum_probs=75.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccC--CC-C----CH------HHHHHHHHHHHhcCcEEEcCcccE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVL--RG-F----DE------DIRDFVAEQMSLRGIEFHTEESPQ 310 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l--~~-~----~~------~~~~~l~~~l~~~Gv~i~~~~~v~ 310 (551)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. +. . .. ++.....+.+++.|++++.+++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999887542 10 0 01 111113467788999999999999
Q ss_pred EEEEcCCceEEEEE-CCCeEEEeeEEEEecCcCCCCC
Q 008841 311 AILKSTDGSLSVKT-NKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 311 ~i~~~~~~~~~V~~-~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
+++.+.+. +.+.. .+++++.+|.+|+|||.+|...
T Consensus 83 ~id~~~~~-v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDVENQL-IAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEETTTTE-EEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEECCCCE-EEEEecCceEEEEcCEEEECCCcccCCC
Confidence 99876554 54542 3456799999999999988764
No 226
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.09 E-value=6.8e-06 Score=84.00 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=30.6
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
.+||+|||||++|+++|..|++.|++|+|+|+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 58999999999999999999999999999994
No 227
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.09 E-value=2.5e-05 Score=76.76 Aligned_cols=98 Identities=18% Similarity=0.123 Sum_probs=74.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc---c--------CCC----CCHHHHHHHHHHHHhcCcEEEcCcccEE
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK---V--------LRG----FDEDIRDFVAEQMSLRGIEFHTEESPQA 311 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~---~--------l~~----~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 311 (551)
.|+|||+|+.|+.+|..+++.|.+|+++++... + ++. ..+++.....+...+.+..+..+..+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 689999999999999999999999999987531 1 111 1246666677778888888888866666
Q ss_pred EEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 312 ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 312 i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
..... ..+...+++++.+|.+|+|||.+|....
T Consensus 88 ~~~~~---~~~~~~~~~~~~~d~liiAtGs~~~~~~ 120 (312)
T 4gcm_A 88 EDKGE---YKVINFGNKELTAKAVIIATGAEYKKIG 120 (312)
T ss_dssp EECSS---CEEEECSSCEEEEEEEEECCCEEECCCC
T ss_pred eeeec---ceeeccCCeEEEeceeEEcccCccCcCC
Confidence 55433 2355667788999999999999887543
No 228
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.08 E-value=2e-05 Score=81.99 Aligned_cols=100 Identities=15% Similarity=0.049 Sum_probs=77.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC-----C-------------------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR-----G------------------------------------- 283 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~-----~------------------------------------- 283 (551)
-+|+|||+|+.|+.+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 3699999999999999999999999999998653210 0
Q ss_pred ----------CC-HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEEC---CCe--EEEeeEEEEecCcCCCC
Q 008841 284 ----------FD-EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN---KGT--VDGFSHVMFATGRRPNT 345 (551)
Q Consensus 284 ----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~---~G~--~i~~d~vi~a~G~~p~~ 345 (551)
++ ..+.+.+.+.+++.|++++.+++|+++..+++.+..|++. +|+ ++.+|.||.|+|..+..
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 00 1345566777778899999999999998876653335553 676 79999999999998754
No 229
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.07 E-value=2.5e-05 Score=79.76 Aligned_cols=99 Identities=11% Similarity=0.098 Sum_probs=74.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-------CCHHHHH-----------------------------
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-------FDEDIRD----------------------------- 290 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-------~~~~~~~----------------------------- 290 (551)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... +.+...+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999986543211 1111111
Q ss_pred ------------------------------HHHHHHH-hcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEec
Q 008841 291 ------------------------------FVAEQMS-LRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFAT 339 (551)
Q Consensus 291 ------------------------------~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~ 339 (551)
.+.+.|. ..+..+++++++++++..+++.++|++.||+++++|+||-|-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgAD 162 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGAD 162 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECC
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECC
Confidence 1223332 235568889999999887666588999999999999999999
Q ss_pred CcCCCC
Q 008841 340 GRRPNT 345 (551)
Q Consensus 340 G~~p~~ 345 (551)
|.+...
T Consensus 163 G~~S~v 168 (412)
T 4hb9_A 163 GSNSKV 168 (412)
T ss_dssp CTTCHH
T ss_pred CCCcch
Confidence 987643
No 230
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.05 E-value=7e-06 Score=84.27 Aligned_cols=99 Identities=13% Similarity=0.194 Sum_probs=74.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCC--eEEEEeecCccCC---CCCHHHHHH-H-----HHHHHhcCcEEEcCcccEEEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTS--EVHVFIRQKKVLR---GFDEDIRDF-V-----AEQMSLRGIEFHTEESPQAIL 313 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~--~Vtlv~~~~~~l~---~~~~~~~~~-l-----~~~l~~~Gv~i~~~~~v~~i~ 313 (551)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.- .+...+... . .+.+++.|++++.+++|+.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 3579999999999999999999987 5999998765321 111111100 0 003567799999999999997
Q ss_pred EcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 314 KSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 314 ~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.+.. .|.+.+|+++.+|.+|+|||.+|...
T Consensus 87 ~~~~---~v~~~~g~~~~~d~lviAtG~~~~~~ 116 (408)
T 2gqw_A 87 PQAH---TVALSDGRTLPYGTLVLATGAAPRAL 116 (408)
T ss_dssp TTTT---EEEETTSCEEECSEEEECCCEEECCC
T ss_pred CCCC---EEEECCCCEEECCEEEECCCCCCCCC
Confidence 6543 47778888899999999999988764
No 231
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.04 E-value=1.8e-05 Score=80.84 Aligned_cols=100 Identities=14% Similarity=0.191 Sum_probs=74.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-------CCH-H---H-------------------------
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-------FDE-D---I------------------------- 288 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-------~~~-~---~------------------------- 288 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... +.+ . +
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 358999999999999999999999999999987643110 000 0 0
Q ss_pred ---------------------HHHHHHHHHhc--CcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 289 ---------------------RDFVAEQMSLR--GIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 289 ---------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
...+.+.|.+. +++++++++|++++.++++ +.|++.+|+++.+|.||.|.|..+..
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK-WTLTFENKPSETADLVILANGGMSKV 184 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS-EEEEETTSCCEEESEEEECSCTTCSC
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE-EEEEECCCcEEecCEEEECCCcchhH
Confidence 01122222221 3578899999999987766 78999999889999999999998765
No 232
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.04 E-value=3.5e-05 Score=82.13 Aligned_cols=97 Identities=19% Similarity=0.188 Sum_probs=74.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC--------C-------------CCC----------------HHH
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL--------R-------------GFD----------------EDI 288 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l--------~-------------~~~----------------~~~ 288 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 379999999999999999999999999999875420 1 011 233
Q ss_pred HHHHHHHHHhcC--cEEEcCcccEEEEEcCC-ceEEEEECCCeEEEeeEEEEecCcC
Q 008841 289 RDFVAEQMSLRG--IEFHTEESPQAILKSTD-GSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 289 ~~~l~~~l~~~G--v~i~~~~~v~~i~~~~~-~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
.+.+.+..++.+ ++++++++|++++.+++ +...|++.+|+++.+|.||+|+|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 444555555555 67899999999987653 3477889999889999999999964
No 233
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.02 E-value=4e-06 Score=84.45 Aligned_cols=43 Identities=28% Similarity=0.387 Sum_probs=38.0
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCC-CCCCCeec
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETT-GGVGGTCV 121 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~-~~~GG~~~ 121 (551)
...+||+|||||++||+||+.|++.|++|+|+|+ . ..+||.|.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~---------~~~~vGGr~~ 85 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEA---------NANRVGGRIK 85 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECS---------CSSCCBTTCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEec---------cccccCCcee
Confidence 3458999999999999999999999999999993 4 57889875
No 234
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.02 E-value=9.7e-06 Score=87.41 Aligned_cols=101 Identities=16% Similarity=0.248 Sum_probs=77.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccC----------CC-C-C--HHHHHHHHHHHHhcCcEEEcCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVL----------RG-F-D--EDIRDFVAEQMSLRGIEFHTEES 308 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l----------~~-~-~--~~~~~~l~~~l~~~Gv~i~~~~~ 308 (551)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. .. . + ..+...+....++.|++++++++
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 47899999999999999999998 88999999987631 11 1 1 11233455666788999999999
Q ss_pred cEEEEEcCCceEEEEE-CCCe--EEEeeEEEEecCcCCCCC
Q 008841 309 PQAILKSTDGSLSVKT-NKGT--VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 309 v~~i~~~~~~~~~V~~-~~G~--~i~~d~vi~a~G~~p~~~ 346 (551)
|++++.+++. +.+.. .+|+ .+.+|.+|+|||.+|...
T Consensus 116 V~~id~~~~~-v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 116 VVKINKEEKT-ITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEECCCCE-EEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999876554 55544 4565 689999999999988754
No 235
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.01 E-value=2.9e-05 Score=82.59 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=77.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC--------------------------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL-------------------------------------------- 281 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 281 (551)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999875220
Q ss_pred -------C----C------------------C-CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCC----ceEEEEECCC
Q 008841 282 -------R----G------------------F-DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTD----GSLSVKTNKG 327 (551)
Q Consensus 282 -------~----~------------------~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----~~~~V~~~~G 327 (551)
. . + ...+.+.+.+.+++.|++++++++|++++.+++ + +.+++.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~-v~v~~~~~ 164 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAG-VTARLAGP 164 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSE-EEEEEEET
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCcccc-EEEEEEcC
Confidence 0 0 0 123445567777888999999999999998776 5 77777665
Q ss_pred ---eEEEeeEEEEecCcCC
Q 008841 328 ---TVDGFSHVMFATGRRP 343 (551)
Q Consensus 328 ---~~i~~d~vi~a~G~~p 343 (551)
.++.+|.||.|.|...
T Consensus 165 ~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 165 DGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TEEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCCcc
Confidence 6799999999999865
No 236
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.00 E-value=5.1e-06 Score=85.64 Aligned_cols=55 Identities=4% Similarity=-0.038 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
.+.....+..+..+.+++++++|++|..++++ +.|++.+|+ +.+|.||+|++..-
T Consensus 204 g~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~-v~v~~~~g~-~~ad~Vv~a~~~~~ 258 (424)
T 2b9w_A 204 GTQAMFEHLNATLEHPAERNVDITRITREDGK-VHIHTTDWD-RESDVLVLTVPLEK 258 (424)
T ss_dssp CHHHHHHHHHHHSSSCCBCSCCEEEEECCTTC-EEEEESSCE-EEESEEEECSCHHH
T ss_pred hHHHHHHHHHHhhcceEEcCCEEEEEEEECCE-EEEEECCCe-EEcCEEEECCCHHH
Confidence 34444445555556788999999999887666 678888886 99999999998753
No 237
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.99 E-value=5.1e-06 Score=84.38 Aligned_cols=43 Identities=28% Similarity=0.414 Sum_probs=38.2
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeec
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCV 121 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~ 121 (551)
..++||+|||||++|+++|..|++.|.+|+|+|+ ...+||.|.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~---------~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDR---------RPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEec---------cCCCCCccc
Confidence 3469999999999999999999999999999993 567888875
No 238
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.98 E-value=5.1e-06 Score=82.62 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=30.5
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
++||+|||||++|+++|+.|++.|.+|+|||+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEEC
Confidence 47999999999999999999999999999994
No 239
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.98 E-value=9.2e-06 Score=87.13 Aligned_cols=101 Identities=20% Similarity=0.251 Sum_probs=73.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccC----------CC-C-C-H-HHHHHHHHHHHhcCcEEEcCccc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVL----------RG-F-D-E-DIRDFVAEQMSLRGIEFHTEESP 309 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l----------~~-~-~-~-~~~~~l~~~l~~~Gv~i~~~~~v 309 (551)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+. .. . + . .+........++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5899999999999999999988 78999999987631 00 0 0 0 11122334445589999999999
Q ss_pred EEEEEcCCceEEEEE-CCCe--EEEeeEEEEecCcCCCCCC
Q 008841 310 QAILKSTDGSLSVKT-NKGT--VDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 310 ~~i~~~~~~~~~V~~-~~G~--~i~~d~vi~a~G~~p~~~~ 347 (551)
++++.+.+. +.+.. .+|+ ++.+|.+|+|||.+|....
T Consensus 82 ~~id~~~~~-v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ 121 (565)
T 3ntd_A 82 VAIDRAAKL-VTVRRLLDGSEYQESYDTLLLSPGAAPIVPP 121 (565)
T ss_dssp EEEETTTTE-EEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCE-EEEEecCCCCeEEEECCEEEECCCCCCCCCC
Confidence 999876554 55544 2343 7899999999999887643
No 240
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.97 E-value=1.1e-05 Score=84.08 Aligned_cols=100 Identities=16% Similarity=0.087 Sum_probs=75.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhCC-----CeEEEEeecCccC-------CC--C----------------------------
Q 008841 247 KIAIVGGGYIALEFAGIFSGLT-----SEVHVFIRQKKVL-------RG--F---------------------------- 284 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g-----~~Vtlv~~~~~~l-------~~--~---------------------------- 284 (551)
+|+|||+|+.|+.+|..|++.| .+|+++++.+.+. +. .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 6999999999999999999999 9999999877321 00 0
Q ss_pred --------------CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcC--Cce--EEEEECCCe----EEEeeEEEEecCcC
Q 008841 285 --------------DEDIRDFVAEQMSLRGIEFHTEESPQAILKST--DGS--LSVKTNKGT----VDGFSHVMFATGRR 342 (551)
Q Consensus 285 --------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~--~~V~~~~G~----~i~~d~vi~a~G~~ 342 (551)
..++.+.+....++.+++++++++|++++.++ ++. +.|.+.+|+ ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 12334445555666789999999999998752 221 367776664 79999999999998
Q ss_pred CCCC
Q 008841 343 PNTK 346 (551)
Q Consensus 343 p~~~ 346 (551)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 7643
No 241
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.96 E-value=1.2e-05 Score=84.15 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=65.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCcc------CCC-C------CHHH-------HHHHHHHHHhcCcEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKV------LRG-F------DEDI-------RDFVAEQMSLRGIEF 303 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~------l~~-~------~~~~-------~~~l~~~l~~~Gv~i 303 (551)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+ ++. + ..++ ........++.|+++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 83 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVEA 83 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcEE
Confidence 6899999999999999999998 8999999998763 111 1 1111 112222333579999
Q ss_pred EcCcccEEEEEcCCceEEEEE-CCCe--EEEeeEEEEecCcCCCCC
Q 008841 304 HTEESPQAILKSTDGSLSVKT-NKGT--VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 304 ~~~~~v~~i~~~~~~~~~V~~-~~G~--~i~~d~vi~a~G~~p~~~ 346 (551)
+.+++|++++.+.+. +.+.. .+|+ .+.+|.+|+|||.+|...
T Consensus 84 ~~~~~V~~id~~~~~-v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 84 LVETRAHAIDRAAHT-VEIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp ECSEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EECCEEEEEECCCCE-EEEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999876554 55544 3354 789999999999988754
No 242
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.93 E-value=7.4e-06 Score=82.57 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=32.3
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
|++++||+|||||++|+++|++|++.|++|+|||+
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEec
Confidence 44578999999999999999999999999999993
No 243
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.92 E-value=1.2e-05 Score=83.60 Aligned_cols=99 Identities=14% Similarity=0.191 Sum_probs=73.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccC----------CC-C---C-HHHHHHHHHHHHhcCcEEEcCccc
Q 008841 247 KIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVL----------RG-F---D-EDIRDFVAEQMSLRGIEFHTEESP 309 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l----------~~-~---~-~~~~~~l~~~l~~~Gv~i~~~~~v 309 (551)
+++|||+|+.|+.+|..|++. |.+|+++++.+.+. .. . + .++...+.+.+++.|++++.++++
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 689999999999999999998 99999999987421 11 1 1 112222346677889999999999
Q ss_pred EEEEEcCCceEEEEEC-C--CeEEEeeEEEEecCcCCCCC
Q 008841 310 QAILKSTDGSLSVKTN-K--GTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 310 ~~i~~~~~~~~~V~~~-~--G~~i~~d~vi~a~G~~p~~~ 346 (551)
..++.+++. +.+... + ++++.+|.+|+|+|.+|...
T Consensus 82 ~~i~~~~~~-v~v~~~~~g~~~~~~~d~lviAtGs~p~~p 120 (452)
T 2cdu_A 82 TNVDPETKT-IKVKDLITNEEKTEAYDKLIMTTGSKPTVP 120 (452)
T ss_dssp EEEEGGGTE-EEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEcCCCE-EEEEecCCCceEEEECCEEEEccCCCcCCC
Confidence 999765544 555431 2 45799999999999988754
No 244
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.91 E-value=5.6e-06 Score=87.77 Aligned_cols=40 Identities=28% Similarity=0.414 Sum_probs=36.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCC-CcEEEEccCCCCCCCCCCCCCCCee
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFG-ASVAICELPFSTISSETTGGVGGTC 120 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G-~~V~liE~~~~~~~~~~~~~~GG~~ 120 (551)
.+||+|||||++||+||..|++.| ++|+|+|+ ...+||.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa---------~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEA---------RDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECS---------SSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeC---------CCCCCCce
Confidence 579999999999999999999999 99999994 66788876
No 245
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.91 E-value=1.6e-05 Score=82.52 Aligned_cols=99 Identities=20% Similarity=0.368 Sum_probs=74.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccC----------CC-C-C-HHHHHHHHHHHHhcCcEEEcCcccEE
Q 008841 247 KIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVL----------RG-F-D-EDIRDFVAEQMSLRGIEFHTEESPQA 311 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l----------~~-~-~-~~~~~~l~~~l~~~Gv~i~~~~~v~~ 311 (551)
+++|||+|+.|+.+|..|++. |.+|+++++.+.+. .. . + .++.....+.+++.|++++.++.+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 81 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITA 81 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEEE
Confidence 699999999999999999988 89999999876431 01 0 1 11222245667788999999999999
Q ss_pred EEEcCCceEEEEE-CCCe--EEEeeEEEEecCcCCCCC
Q 008841 312 ILKSTDGSLSVKT-NKGT--VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 312 i~~~~~~~~~V~~-~~G~--~i~~d~vi~a~G~~p~~~ 346 (551)
++.+++. +.+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 82 i~~~~~~-v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 118 (447)
T 1nhp_A 82 IQPKEHQ-VTVKDLVSGEERVENYDKLIISPGAVPFEL 118 (447)
T ss_dssp EETTTTE-EEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EeCCCCE-EEEEecCCCceEEEeCCEEEEcCCCCcCCC
Confidence 9765544 55544 3464 489999999999988754
No 246
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.91 E-value=8.6e-06 Score=85.72 Aligned_cols=101 Identities=20% Similarity=0.224 Sum_probs=74.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCC---CeEEEEeecCccC----------CC---CCHHHHHHHHHHHHhcCcEEEcCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLT---SEVHVFIRQKKVL----------RG---FDEDIRDFVAEQMSLRGIEFHTEES 308 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g---~~Vtlv~~~~~~l----------~~---~~~~~~~~l~~~l~~~Gv~i~~~~~ 308 (551)
..+|+|||+|+.|+.+|..|++.| .+|+++++.+.+. .. ..+++.....+.+++.|++++.+++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 368999999999999999999988 9999999876421 11 0112222234567788999999999
Q ss_pred cEEEEEcCCceEEEEEC-CCeEEEeeEEEEecCcCCCCC
Q 008841 309 PQAILKSTDGSLSVKTN-KGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 309 v~~i~~~~~~~~~V~~~-~G~~i~~d~vi~a~G~~p~~~ 346 (551)
+..++.+++. +.+... +++++.+|.+|+|||.+|...
T Consensus 115 v~~i~~~~~~-v~v~~~g~~~~~~~d~lviAtG~~p~~p 152 (490)
T 2bc0_A 115 VQSIDYDAKT-VTALVDGKNHVETYDKLIFATGSQPILP 152 (490)
T ss_dssp EEEEETTTTE-EEEEETTEEEEEECSEEEECCCEEECCC
T ss_pred EEEEECCCCE-EEEEeCCcEEEEECCEEEECCCCCcCCC
Confidence 9999765543 444321 235799999999999988754
No 247
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.89 E-value=1.6e-05 Score=83.79 Aligned_cols=100 Identities=17% Similarity=0.263 Sum_probs=71.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC-----C-----CCCH-HHHHHHHHHH--HhcCcEEEcCcccEEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL-----R-----GFDE-DIRDFVAEQM--SLRGIEFHTEESPQAI 312 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l-----~-----~~~~-~~~~~l~~~l--~~~Gv~i~~~~~v~~i 312 (551)
++|||||+|+.|+.+|..|.+.+.+|+++++.+.+. + .+++ ++...+.+.+ ++.+++++.. ++++|
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~I 121 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATSI 121 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEEE
Confidence 589999999999999999999999999999987532 1 1221 1222233333 2447888866 78888
Q ss_pred EEcCCceEEEEE------------------CCCeEEEeeEEEEecCcCCCCCC
Q 008841 313 LKSTDGSLSVKT------------------NKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 313 ~~~~~~~~~V~~------------------~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
+.+.+. +.+.. .++.++++|.+|+|+|..|+...
T Consensus 122 D~~~k~-V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ 173 (502)
T 4g6h_A 122 NPDRNT-VTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG 173 (502)
T ss_dssp EGGGTE-EEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT
T ss_pred EhhhCE-EEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC
Confidence 876554 44432 34668999999999999998754
No 248
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.89 E-value=1.2e-05 Score=83.20 Aligned_cols=54 Identities=13% Similarity=0.101 Sum_probs=39.3
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHH
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLL 131 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l 131 (551)
++||+|||||++|+++|+.|++.|++|+|||+. ......+|.+...+|.....+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~------~~~~~~~g~~~~~~~~~~~~~ 75 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDR------KPDEYSGLRLLNTVAHNAVTV 75 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESC------CGGGSTTSCCCCCCCBCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCC------ChHhhcccccccchhccchhh
Confidence 479999999999999999999999999999931 111223445555566655444
No 249
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.89 E-value=0.00025 Score=77.28 Aligned_cols=32 Identities=28% Similarity=0.430 Sum_probs=30.6
Q ss_pred CccEEEECCChHHHHHHHHHHh-----CCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAAN-----FGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~-----~G~~V~liE~ 103 (551)
++||+||||||+||++|..|++ .|++|+|||+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~ 44 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDK 44 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeC
Confidence 5899999999999999999999 9999999994
No 250
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.88 E-value=9.9e-06 Score=85.20 Aligned_cols=53 Identities=8% Similarity=0.058 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC---eEEEeeEEEEecCcC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG---TVDGFSHVMFATGRR 342 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G---~~i~~d~vi~a~G~~ 342 (551)
.+.+.+.+.+.+ .+++++++|++|+.++++ +.|++.+| +++.+|.||+|++..
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSEG-VTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCCe-EEEEEecCCeEEEEECCEEEECCCHH
Confidence 455555555532 689999999999987776 77887776 679999999998654
No 251
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.88 E-value=6.8e-06 Score=85.51 Aligned_cols=41 Identities=34% Similarity=0.459 Sum_probs=36.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeec
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCV 121 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~ 121 (551)
++||+|||||++||+||+.|++.|++|+|+|+ ...+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~---------~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEA---------RDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEEC---------CCCCCCcee
Confidence 58999999999999999999999999999993 566788764
No 252
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.88 E-value=8.4e-06 Score=85.44 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE---CCCeEEEeeEEEEecCcC
Q 008841 287 DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT---NKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 287 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~---~~G~~i~~d~vi~a~G~~ 342 (551)
.+.+.+.+.+ |++++++++|++|..++++ +.|++ .+|+++.+|.||+|++..
T Consensus 239 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~-~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 239 VLIDALAASL---GDAAHVGARVEGLAREDGG-WRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHHH---GGGEESSEEEEEEECC--C-CEEEEEETTEEEEEECSEEEECSCHH
T ss_pred HHHHHHHHHh---hhhEEcCCEEEEEEecCCe-EEEEEeecCCCceEEcCEEEECCCHH
Confidence 4444444444 6799999999999877666 77887 778889999999999764
No 253
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.87 E-value=8.3e-06 Score=82.41 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=37.1
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeecc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVL 122 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~ 122 (551)
++||+|||||++|+++|.+|++.|++|+|+|+ ...+||.|..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~---------~~~~GG~~~~ 42 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEK---------RNHIGGNAYT 42 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECS---------SSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEec---------CCCCCcceEe
Confidence 37999999999999999999999999999993 5678888753
No 254
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.87 E-value=9.2e-06 Score=85.77 Aligned_cols=43 Identities=28% Similarity=0.360 Sum_probs=36.0
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCee
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTC 120 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~ 120 (551)
|...+||+|||||++||++|+.|++.|++|+|+|+ ...+||.+
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~---------~~~~GG~~ 52 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEA---------EGKAGGKL 52 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECS---------SSSSCSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEe---------CCCCCCce
Confidence 44568999999999999999999999999999994 56677765
No 255
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.87 E-value=1.1e-05 Score=83.77 Aligned_cols=89 Identities=18% Similarity=0.253 Sum_probs=70.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc-------CCC--CCHHHHHHHHHHHHhcCcEEEcCcccEEEEE
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV-------LRG--FDEDIRDFVAEQMSLRGIEFHTEESPQAILK 314 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~-------l~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~ 314 (551)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++. ++.++.+...+.+++.||++++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 3578999999999999999999999999999998764 233 466777788888999999999997763
Q ss_pred cCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 315 STDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 315 ~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
.. +.+.++. +++|.||+|+|..
T Consensus 197 --~~---v~~~~~~-~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 --RD---ASLPELR-RKHVAVLVATGVY 218 (456)
T ss_dssp --TT---BCHHHHH-SSCSEEEECCCCC
T ss_pred --cE---EEhhHhH-hhCCEEEEecCCC
Confidence 11 2233332 5799999999996
No 256
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.85 E-value=1.3e-05 Score=82.87 Aligned_cols=59 Identities=14% Similarity=0.211 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
...+.+.+.+.+++.|++++++++|++|..++++...|. .+|+++.||.||+|+|..+.
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 347888899999999999999999999988766533344 47888999999999998874
No 257
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.85 E-value=2.7e-05 Score=81.72 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=73.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccC------C----C--C-CHHHHHHHHHHH-HhcCcEEEcCccc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVL------R----G--F-DEDIRDFVAEQM-SLRGIEFHTEESP 309 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l------~----~--~-~~~~~~~l~~~l-~~~Gv~i~~~~~v 309 (551)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+... + . . ..++.....+.+ +..|++++.+++|
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 4899999999999999999986 89999999876531 0 0 0 111111223445 4459999999999
Q ss_pred EEEEEcCCceEEEEE-CCCe--EEEeeEEEEecCcCCCCC
Q 008841 310 QAILKSTDGSLSVKT-NKGT--VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 310 ~~i~~~~~~~~~V~~-~~G~--~i~~d~vi~a~G~~p~~~ 346 (551)
..++.+++. +.+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 117 ~~i~~~~~~-v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDTEKKI-VYAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEETTTTE-EEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEECCCCE-EEEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 999765544 55554 4566 799999999999988754
No 258
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.82 E-value=5.6e-05 Score=78.92 Aligned_cols=97 Identities=13% Similarity=0.110 Sum_probs=72.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC-------------------------------CCCH-HH------
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR-------------------------------GFDE-DI------ 288 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~~~-~~------ 288 (551)
+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-. .++- .+
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKDY 85 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHHh
Confidence 699999999999999999999999999996654310 0110 00
Q ss_pred ----H--HHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeE--EEeeEEEEecCcCCCCCC
Q 008841 289 ----R--DFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTV--DGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 289 ----~--~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~--i~~d~vi~a~G~~p~~~~ 347 (551)
. ..+.+.+++.|++++.+ ++..++ .+ .+.|.+.+|++ +.+|.+|+|+|..|....
T Consensus 86 ~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~~-~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~ 148 (466)
T 3l8k_A 86 VQELRFKQHKRNMSQYETLTFYKG-YVKIKD--PT-HVIVKTDEGKEIEAETRYMIIASGAETAKLR 148 (466)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--TT-EEEEEETTSCEEEEEEEEEEECCCEEECCCC
T ss_pred heeccccchHHHHHHhCCCEEEEe-EEEEec--CC-eEEEEcCCCcEEEEecCEEEECCCCCccCCC
Confidence 1 33444556779999988 566664 22 37788888888 999999999999887643
No 259
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.81 E-value=2e-05 Score=82.89 Aligned_cols=97 Identities=16% Similarity=0.274 Sum_probs=70.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccC------CC-C--CH--HHHHH--------------------H
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVL------RG-F--DE--DIRDF--------------------V 292 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l------~~-~--~~--~~~~~--------------------l 292 (551)
.+++|||+|+.|+.+|..|++. +.+|+++++.+.+. .. + .. ...+. +
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFY 91 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGGS
T ss_pred CCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHhh
Confidence 4799999999999999998876 88999999876431 00 0 00 00000 0
Q ss_pred H--HH---HHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 293 A--EQ---MSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 293 ~--~~---l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
. +. +.+.||+++.+++|..++.+.. .|.+.+|+++.+|.+|+|||.+|..
T Consensus 92 ~~~~~l~~~~~~gv~~~~g~~v~~id~~~~---~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 92 VSAQDLPHIENGGVAVLTGKKVVQLDVRDN---MVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp BCTTTTTTSTTCEEEEEETCCEEEEEGGGT---EEEETTSCEEEEEEEEECCCEEECC
T ss_pred cchhhhhhhhcCCeEEEcCCEEEEEECCCC---EEEECCCCEEECCEEEECCCCCCCC
Confidence 0 00 1246899999999999976543 4778899899999999999998864
No 260
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.80 E-value=1.3e-05 Score=86.53 Aligned_cols=60 Identities=12% Similarity=0.060 Sum_probs=43.8
Q ss_pred HhcCcEEEcCcccEEEEEcCC--ceEEEEEC---CCe--EEEeeEEEEecCcCCCCCCCCccccCee
Q 008841 297 SLRGIEFHTEESPQAILKSTD--GSLSVKTN---KGT--VDGFSHVMFATGRRPNTKNLGLEKVGVK 356 (551)
Q Consensus 297 ~~~Gv~i~~~~~v~~i~~~~~--~~~~V~~~---~G~--~i~~d~vi~a~G~~p~~~~l~l~~~gl~ 356 (551)
++.|+++++++.|++|..+++ ....|++. +|+ ++.+|.||+|+|..|++.+|.+...|..
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~ 337 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQL 337 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCC
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCcc
Confidence 345899999999999987643 34456553 454 6889999999999999887544444443
No 261
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.80 E-value=2.5e-05 Score=80.85 Aligned_cols=100 Identities=17% Similarity=0.195 Sum_probs=71.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhCC--CeEEEEeecCccCC----------C--CCHH--HHHHHHHHHHhcCcEEEcCcccE
Q 008841 247 KIAIVGGGYIALEFAGIFSGLT--SEVHVFIRQKKVLR----------G--FDED--IRDFVAEQMSLRGIEFHTEESPQ 310 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g--~~Vtlv~~~~~~l~----------~--~~~~--~~~~l~~~l~~~Gv~i~~~~~v~ 310 (551)
||+|||+|+.|+.+|..|+++| .+|+++++.+...- . .+.. +.....+.+++.|++++.+++|+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 5999999999999999999987 47999998764310 0 0110 11112455678899999999999
Q ss_pred EEEEcCCceEEEEEC---CCeEEEeeEEEEecCcCCCCCC
Q 008841 311 AILKSTDGSLSVKTN---KGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 311 ~i~~~~~~~~~V~~~---~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
.|+.+... +.+... ++.++.+|.+|+|||.+|+...
T Consensus 82 ~id~~~~~-~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~ 120 (437)
T 4eqs_A 82 AINDERQT-VSVLNRKTNEQFEESYDKLILSPGASANSLG 120 (437)
T ss_dssp EEETTTTE-EEEEETTTTEEEEEECSEEEECCCEEECCCC
T ss_pred EEEccCcE-EEEEeccCCceEEEEcCEEEECCCCcccccc
Confidence 99866544 444432 2346889999999999987643
No 262
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.79 E-value=9e-05 Score=77.38 Aligned_cols=97 Identities=13% Similarity=0.143 Sum_probs=71.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC--------------------------------------CCC-H
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR--------------------------------------GFD-E 286 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~--------------------------------------~~~-~ 286 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ..+ +
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSA 82 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 4799999999999999999999999999999854210 000 0
Q ss_pred H-----------HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCCCC
Q 008841 287 D-----------IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 287 ~-----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~~~ 346 (551)
. +...+.+.+++.|++++.++.+ .+ +.+. +.|.+.+| +++.+|.+|+|||.+|...
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~~~-~~v~~~~G~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 83 KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FE--TAHS-IRVNGLDGKQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EE--ETTE-EEEEETTSCEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--eCCE-EEEEecCCceEEEEcCEEEECCCCCcCCC
Confidence 0 1112345667789999988643 34 2333 77888888 6899999999999988754
No 263
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.74 E-value=2.1e-05 Score=80.00 Aligned_cols=41 Identities=27% Similarity=0.410 Sum_probs=36.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeec
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCV 121 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~ 121 (551)
++||+|||||++|+++|..|++.|++|+|+|+ ...+||.|.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~---------~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQ---------RDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEES---------SSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEe---------cCCcCCccc
Confidence 47999999999999999999999999999993 567888764
No 264
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.73 E-value=1.8e-05 Score=82.94 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=35.3
Q ss_pred cEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 301 IEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 301 v~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
++|+++++|++|+.++++ +.|++.+| ++.+|.||+|++..
T Consensus 249 ~~i~~~~~V~~i~~~~~~-~~v~~~~g-~~~ad~vV~a~p~~ 288 (475)
T 3lov_A 249 SEIRLETPLLAISREDGR-YRLKTDHG-PEYADYVLLTIPHP 288 (475)
T ss_dssp CEEESSCCCCEEEEETTE-EEEECTTC-CEEESEEEECSCHH
T ss_pred CEEEcCCeeeEEEEeCCE-EEEEECCC-eEECCEEEECCCHH
Confidence 799999999999987766 77888888 69999999999863
No 265
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.73 E-value=0.00012 Score=76.36 Aligned_cols=98 Identities=21% Similarity=0.208 Sum_probs=70.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc--------------------------cCCC----------CC-HH
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK--------------------------VLRG----------FD-ED 287 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~--------------------------~l~~----------~~-~~ 287 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++... ..+. .+ ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSK 83 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHHH
Confidence 35899999999999999999999999999998730 0010 11 11
Q ss_pred HHH-------H-----HHHHHHhc-CcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCCCC
Q 008841 288 IRD-------F-----VAEQMSLR-GIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 288 ~~~-------~-----l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~~~ 346 (551)
+.. . +.+.+++. |++++.+ ++..++ .+ .+.|.+.+| +++.+|.+|+|||.+|...
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~--~~-~~~v~~~~g~~~~~~~d~lviAtGs~p~~p 153 (467)
T 1zk7_A 84 LLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKD--DQ-SLTVRLNEGGERVVMFDRCLVATGASPAVP 153 (467)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEE--TT-EEEEEETTSSEEEEECSEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEcc--CC-EEEEEeCCCceEEEEeCEEEEeCCCCCCCC
Confidence 111 1 22445566 9999887 355553 23 377888888 6799999999999988754
No 266
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.73 E-value=8.1e-05 Score=77.89 Aligned_cols=97 Identities=10% Similarity=0.119 Sum_probs=70.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC--------------------------------------CCC-H
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR--------------------------------------GFD-E 286 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~--------------------------------------~~~-~ 286 (551)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+.. ..+ +
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 86 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLD 86 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCHH
Confidence 4799999999999999999999999999999863200 000 0
Q ss_pred H-----------HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECC-C-eEEEeeEEEEecCcCCCCC
Q 008841 287 D-----------IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNK-G-TVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 287 ~-----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~-G-~~i~~d~vi~a~G~~p~~~ 346 (551)
. +...+.+.+++.||+++.++. ..+ +.+. +.|.+.+ | +++.+|.+|+|||.+|...
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~-~~~--~~~~-~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 87 KMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYG-KIT--GKNQ-VTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEE-EEE--ETTE-EEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEe--cCCE-EEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 0 111235667788999998854 333 2333 6777777 4 5799999999999988754
No 267
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.72 E-value=2.6e-05 Score=81.85 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=36.8
Q ss_pred CCccEEEECCChHHHHHHHHHHhCC-CcEEEEccCCCCCCCCCCCCCCCeec
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFG-ASVAICELPFSTISSETTGGVGGTCV 121 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G-~~V~liE~~~~~~~~~~~~~~GG~~~ 121 (551)
+++||+|||||++|+++|+.|++.| .+|+|+|+ ...+||.|.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~---------~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYEC---------NDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEES---------SSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeC---------CCCCCCeee
Confidence 3589999999999999999999998 79999993 556888764
No 268
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.71 E-value=4.7e-05 Score=79.60 Aligned_cols=97 Identities=19% Similarity=0.175 Sum_probs=71.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-------------------------------------CCH-H
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-------------------------------------FDE-D 287 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~~~-~ 287 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .+. .
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAA 86 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 57999999999999999999999999999998643100 000 0
Q ss_pred -----------HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCCCC
Q 008841 288 -----------IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 288 -----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~~~ 346 (551)
+...+.+.+++.|++++.++.+. + +.+. +.|.+.+| +++.+|.+|+|+|.+|...
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~-~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 87 MMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SPSE-ISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ETTE-EEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCE-EEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 11123456677899999996543 3 2333 66777777 6899999999999988754
No 269
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.71 E-value=7.5e-05 Score=77.70 Aligned_cols=96 Identities=18% Similarity=0.164 Sum_probs=70.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC------------------------------------CCCH-H-
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR------------------------------------GFDE-D- 287 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~------------------------------------~~~~-~- 287 (551)
.+++|||+|+.|+.+|..|++.|.+|+++++. .+.. ..+. .
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKV 82 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHH
Confidence 36999999999999999999999999999986 2100 0010 0
Q ss_pred ----------HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC-eEEEeeEEEEecCcCCCCC
Q 008841 288 ----------IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG-TVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 288 ----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G-~~i~~d~vi~a~G~~p~~~ 346 (551)
+.+.+.+.+++.|++++.++.+. + +.+. +.|.+.+| +++.+|.+|+|||.+|...
T Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~~~-v~V~~~~G~~~i~~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 83 QEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DANT-VRVVNGDSAQTYTFKNAIIATGSRPIEL 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ETTE-EEEEETTEEEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cCCe-EEEEeCCCcEEEEeCEEEEecCCCCCCC
Confidence 12223556778899999986543 3 2333 77888888 6799999999999988754
No 270
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.70 E-value=6.4e-05 Score=78.85 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=69.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC----------------------------------C--CCCH-H-
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL----------------------------------R--GFDE-D- 287 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l----------------------------------~--~~~~-~- 287 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. . .++. .
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~~ 86 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDML 86 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 369999999999999999999999999999854321 0 0111 1
Q ss_pred ----------HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC------------eEEEeeEEEEecCcCCCC
Q 008841 288 ----------IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG------------TVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 288 ----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G------------~~i~~d~vi~a~G~~p~~ 345 (551)
+...+.+.+++.|++++.++.+. + +.+. +.|.+.+| .++.+|.+|+|+|.+|..
T Consensus 87 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~-v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 87 RAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-L--DPHH-LEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-E--ETTE-EEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-c--cCCE-EEEEecCCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 11123456677899999886543 2 2333 66666566 579999999999999875
Q ss_pred C
Q 008841 346 K 346 (551)
Q Consensus 346 ~ 346 (551)
.
T Consensus 163 ~ 163 (482)
T 1ojt_A 163 L 163 (482)
T ss_dssp C
T ss_pred C
Confidence 4
No 271
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.69 E-value=5.5e-05 Score=79.24 Aligned_cols=95 Identities=13% Similarity=0.169 Sum_probs=68.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC----------------------------CC----------CC-H
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL----------------------------RG----------FD-E 286 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l----------------------------~~----------~~-~ 286 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+- .. ++ .
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINVA 85 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 469999999999999999999999999999854320 00 00 0
Q ss_pred H-----------HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eE------EEeeEEEEecCcCCC
Q 008841 287 D-----------IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TV------DGFSHVMFATGRRPN 344 (551)
Q Consensus 287 ~-----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~------i~~d~vi~a~G~~p~ 344 (551)
+ +...+.+.+++.||+++.++.+.. +.+ .+.|.+.+| ++ +.+|.||+|+|.+|.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~~~-~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~ 158 (478)
T 1v59_A 86 NFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---DET-KIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVT 158 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---SSS-EEEEECCTTCTTCCSSCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---cCC-eEEEEecCCCcccccccceEEeCEEEECcCCCCC
Confidence 0 111234566778999999875531 333 367777777 56 999999999999884
No 272
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.68 E-value=4.1e-05 Score=80.53 Aligned_cols=98 Identities=17% Similarity=0.176 Sum_probs=72.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC----------CCC---HHHHHHHHHHHHhcCcEEEcCcccEEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR----------GFD---EDIRDFVAEQMSLRGIEFHTEESPQAI 312 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~----------~~~---~~~~~~l~~~l~~~Gv~i~~~~~v~~i 312 (551)
.+|+|||+|+.|+.+|..|++. .+|+++++.+.+.. .++ .++...+.+.+ +.|++++.++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 4799999999999999999999 99999998775411 111 12223333333 569999999999998
Q ss_pred EEcCCceEEEEE-CCCe--EEEeeEEEEecCcCCCCC
Q 008841 313 LKSTDGSLSVKT-NKGT--VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 313 ~~~~~~~~~V~~-~~G~--~i~~d~vi~a~G~~p~~~ 346 (551)
..+++. +.+.. .+++ .+.+|.+|+|+|..|...
T Consensus 187 ~~~~~~-~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 187 FDKGEY-FLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp EECSSS-EEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EcCCcE-EEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 876655 33333 4554 689999999999988754
No 273
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.00025 Score=74.20 Aligned_cols=97 Identities=12% Similarity=0.134 Sum_probs=70.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc--------------------------CC---------------CC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV--------------------------LR---------------GF 284 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~--------------------------l~---------------~~ 284 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++...- .. .+
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 91 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLTF 91 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGCCB
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccCcc
Confidence 47999999999999999999999999999986310 00 00
Q ss_pred CH------------HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCe--EEEeeEEEEecCcCCCCC
Q 008841 285 DE------------DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGT--VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 285 ~~------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~--~i~~d~vi~a~G~~p~~~ 346 (551)
+- .+...+.+.+++.|++++.++ +..+ +.+. +.|.+.+|+ ++.+|.+|+|||.+|...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~~~-~~v~~~~g~~~~~~~d~lviAtGs~p~~p 163 (479)
T 2hqm_A 92 NWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--KDGN-VEVQKRDNTTEVYSANHILVATGGKAIFP 163 (479)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--TTSC-EEEEESSSCCEEEEEEEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eCCE-EEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 10 111223455677899999884 5444 2333 677777886 799999999999988764
No 274
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.67 E-value=2.8e-05 Score=81.98 Aligned_cols=41 Identities=27% Similarity=0.394 Sum_probs=36.4
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCee
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTC 120 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~ 120 (551)
..+||+|||||++|+++|..|++.|.+|+|+|+ ...+||.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~---------~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEA---------SERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECS---------SSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEEC---------CCCCCCce
Confidence 457999999999999999999999999999993 56678865
No 275
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.67 E-value=0.00015 Score=75.66 Aligned_cols=95 Identities=18% Similarity=0.070 Sum_probs=69.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC---------C---------------------------CCCH----
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL---------R---------------------------GFDE---- 286 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l---------~---------------------------~~~~---- 286 (551)
+|+|||+|+.|+.+|..|++.|.+|+++++.. +. | ..+.
T Consensus 5 dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 83 (464)
T 2a8x_A 5 DVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAY 83 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHHHH
Confidence 69999999999999999999999999999862 10 0 0000
Q ss_pred --------HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCCCC
Q 008841 287 --------DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 287 --------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~~~ 346 (551)
.+...+.+.+++.|++++.++.+. + +.+ .+.|.+.+| +++.+|.+|+|+|.+|...
T Consensus 84 ~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d~~-~v~V~~~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 84 DRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--DAN-TLLVDLNDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--SSS-EEEEEETTSCCEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCC-eEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 011223456777899999986543 2 333 377888888 6899999999999988654
No 276
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.65 E-value=2.5e-05 Score=81.29 Aligned_cols=90 Identities=13% Similarity=0.177 Sum_probs=69.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCC--CeEEEEeecCccC--------CCC--CHHHHHHHHHHHHhcCcEEEcCcccEE
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLT--SEVHVFIRQKKVL--------RGF--DEDIRDFVAEQMSLRGIEFHTEESPQA 311 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g--~~Vtlv~~~~~~l--------~~~--~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 311 (551)
.+.+|+|||+|+.|+.+|..|.+.| .+|+++++.+.+. +.+ ..++...+.+.+++.|++++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3578999999999999999999988 8999999987654 222 23566677788889999999997762
Q ss_pred EEEcCCceEEEEECCCeEEEeeEEEEecCcCC
Q 008841 312 ILKSTDGSLSVKTNKGTVDGFSHVMFATGRRP 343 (551)
Q Consensus 312 i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p 343 (551)
.. |.+.+. .+.+|.||+|||..|
T Consensus 84 -----~~---V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -----RD---VTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp -----TT---BCHHHH-HHHSSEEEECCCCCE
T ss_pred -----eE---EEeccc-eEEcCEEEEecCcCC
Confidence 11 333333 368999999999985
No 277
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.65 E-value=0.00022 Score=74.90 Aligned_cols=95 Identities=20% Similarity=0.173 Sum_probs=68.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC----------------------------CC---------C---
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR----------------------------GF---------D--- 285 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~----------------------------~~---------~--- 285 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .+ +
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 105 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQK 105 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCHHH
Confidence 5799999999999999999999999999998654310 00 0
Q ss_pred ---------HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCC
Q 008841 286 ---------EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 ---------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~ 344 (551)
..+...+...+++.|++++.+... .+ + ...+.|.+.+| +++.+|.||+|||..|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~~--~-~~~~~v~~~~g~~~~~~~d~lViATGs~p~ 171 (491)
T 3urh_A 106 MMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGK-VL--G-QGKVSVTNEKGEEQVLEAKNVVIATGSDVA 171 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EC--S-SSEEEEECTTSCEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--c-CCEEEEEeCCCceEEEEeCEEEEccCCCCC
Confidence 011122345567789999887432 22 2 23377777777 57999999999999874
No 278
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.63 E-value=0.00035 Score=74.30 Aligned_cols=55 Identities=16% Similarity=0.154 Sum_probs=44.3
Q ss_pred HHHHHHHHhcCcEEEcCcccEEEEEcCCc-eEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 290 DFVAEQMSLRGIEFHTEESPQAILKSTDG-SLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 290 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
+.+.+.+++.|++++.+ +|+++..++++ .+.|.+.+|+++.+|.||.|+|.....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 34555666789999999 89999876554 357888899889999999999998765
No 279
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.62 E-value=8e-05 Score=77.49 Aligned_cols=95 Identities=20% Similarity=0.147 Sum_probs=67.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC-----------------------------------CCCH-H---
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR-----------------------------------GFDE-D--- 287 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~-----------------------------------~~~~-~--- 287 (551)
+++|||+|+.|+.+|..+++.|.+|+++++.+.+-. ..+. .
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 82 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALMA 82 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHHH
T ss_pred CEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHHH
Confidence 689999999999999999999999999998753210 0010 1
Q ss_pred --------HHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 288 --------IRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 288 --------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
+...+.+.+++.|++++.++.+ .+ +. ..+.|.+ +|+++.+|.+|+|||.+|...
T Consensus 83 ~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~-~~~~v~~-~g~~~~~d~lviAtG~~p~~~ 144 (455)
T 2yqu_A 83 HKDKVVQANTQGVEFLFKKNGIARHQGTAR-FL--SE-RKVLVEE-TGEELEARYILIATGSAPLIP 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESCEE-ES--SS-SEEEETT-TCCEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cC-CeEEEee-CCEEEEecEEEECCCCCCCCC
Confidence 1112345667789999988543 22 22 2255555 677899999999999988654
No 280
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.62 E-value=0.0001 Score=76.83 Aligned_cols=95 Identities=26% Similarity=0.332 Sum_probs=64.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcccC
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYG 152 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 152 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+ ...+ +|
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~---------~~~~---------l~------------------------- 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEA---------RERI---------LP------------------------- 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECS---------SSSS---------ST-------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEc---------CCcc---------cc-------------------------
Confidence 5799999999999999999999999999992 1111 00
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecCCEEEE---cC--EEEEeCeEEEcCCCCCCCCC
Q 008841 153 TEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDPHTVDV---DG--KLYSARHILISVGGRPFIPD 225 (551)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~~~v~v---~g--~~~~~d~lviAtG~~p~~p~ 225 (551)
..+ +. +...+.+.+++.||+++.+ .+..++...+.+ ++ .++.+|.|++|+|.+|+.+.
T Consensus 209 ---~~~-~~-----------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 209 ---TYD-SE-----------LTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp ---TSC-HH-----------HHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred ---ccC-HH-----------HHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 001 11 1112233455669998876 455554333444 35 58999999999999887653
No 281
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.61 E-value=0.0001 Score=77.65 Aligned_cols=99 Identities=21% Similarity=0.272 Sum_probs=71.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC---CCeEEEEeecCcc---------------------------CC--CC---------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL---TSEVHVFIRQKKV---------------------------LR--GF--------- 284 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~---g~~Vtlv~~~~~~---------------------------l~--~~--------- 284 (551)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+ + +. .+
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 3699999999999999999999 99999999874 1 00 01
Q ss_pred CH-H-----------HHHHHHHHHHhcCcEEEcCcccEEEEEc---CCceEEEEECCCe--EEEeeEEEEecCcCCCCC
Q 008841 285 DE-D-----------IRDFVAEQMSLRGIEFHTEESPQAILKS---TDGSLSVKTNKGT--VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 285 ~~-~-----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~~~~~V~~~~G~--~i~~d~vi~a~G~~p~~~ 346 (551)
+. . +...+.+.+++.|++++.++ +..+... +++.+.|.+.+|+ .+.+|.+|+|+|..|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p 159 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 159 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 11 1 12224566788899999985 5555431 0133667777776 799999999999988654
No 282
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.61 E-value=7.9e-05 Score=75.67 Aligned_cols=97 Identities=13% Similarity=0.173 Sum_probs=71.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCC--CeEEEEeecCcc------CCC-C----C-HHHHH-HHHHHHHhcCcEEEcCcccE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLT--SEVHVFIRQKKV------LRG-F----D-EDIRD-FVAEQMSLRGIEFHTEESPQ 310 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g--~~Vtlv~~~~~~------l~~-~----~-~~~~~-~l~~~l~~~Gv~i~~~~~v~ 310 (551)
.+++|||+|+.|+.+|..|++.| .+|+++++.+.. ++. + . .++.. .+.+.+++.|++++.++++.
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 84 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRVT 84 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCCC
T ss_pred CcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEEE
Confidence 57999999999999999999998 568999875421 111 1 1 11111 23455678899999999999
Q ss_pred EEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 311 AILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 311 ~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.++.++. .|.+.+ .++.+|.+|+|||.+|...
T Consensus 85 ~i~~~~~---~v~~~~-~~~~~d~lviAtG~~p~~p 116 (384)
T 2v3a_A 85 GIDPGHQ---RIWIGE-EEVRYRDLVLAWGAEPIRV 116 (384)
T ss_dssp EEEGGGT---EEEETT-EEEECSEEEECCCEEECCC
T ss_pred EEECCCC---EEEECC-cEEECCEEEEeCCCCcCCC
Confidence 9976543 355554 4699999999999988754
No 283
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.56 E-value=0.00036 Score=68.91 Aligned_cols=158 Identities=13% Similarity=0.114 Sum_probs=99.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccCCC--------------------------------------CC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVLRG--------------------------------------FD 285 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l~~--------------------------------------~~ 285 (551)
..|+|||+|..|+.+|..|++. |.+|.++++.+.+... ..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 3699999999999999999997 9999999987532100 01
Q ss_pred HHHHHHHHHHHHh-cCcEEEcCcccEEEEEcCC-------------------ceEEEEE------C--------CCeEEE
Q 008841 286 EDIRDFVAEQMSL-RGIEFHTEESPQAILKSTD-------------------GSLSVKT------N--------KGTVDG 331 (551)
Q Consensus 286 ~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~-------------------~~~~V~~------~--------~G~~i~ 331 (551)
.++.+.+.+.+++ .|++++.++.++++..+++ .+..|.+ . +..++.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 2334556666666 5999999999999876552 2233433 1 234799
Q ss_pred eeEEEEecCcCCCCC-CC--CccccCee--ecCCCCeEeC-------CCCCCCCCcEEEeCcCCCC--------CCChHH
Q 008841 332 FSHVMFATGRRPNTK-NL--GLEKVGVK--MTKNGAIEVD-------EYSGTAVPSIWAVGDVTDR--------INLTPV 391 (551)
Q Consensus 332 ~d~vi~a~G~~p~~~-~l--~l~~~gl~--~~~~G~i~vd-------~~~~t~~~~vya~GD~~~~--------~~~~~~ 391 (551)
++.||.|+|...... ++ .+...++. +...+..+.+ ++-+--+|++|++|=.+.. |.+. .
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~~g~~rmgp~fg-~ 318 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEIDGANRMGPTFG-A 318 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHHHTCEECCSCCH-H
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhhcCCCCCCcccc-e
Confidence 999999999876531 10 01122221 1111112221 1111136999999987651 2222 3
Q ss_pred HHHhHHHHHHHHc
Q 008841 392 ALMEGGALAKTLF 404 (551)
Q Consensus 392 A~~~g~~aa~~i~ 404 (551)
=...|+.+|+.++
T Consensus 319 m~~sg~~~a~~~~ 331 (344)
T 3jsk_A 319 MALSGVKAAHEAI 331 (344)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHH
Confidence 3477888888776
No 284
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.55 E-value=5.6e-05 Score=79.08 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhc--------CcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcC
Q 008841 287 DIRDFVAEQMSLR--------GIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRR 342 (551)
Q Consensus 287 ~~~~~l~~~l~~~--------Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~ 342 (551)
.+.+.+.+.+.+. |.+++++++|++|..++++ +.|++.+|+++.+|.||+|++..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-VTVKTEDNSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-EEEEETTSCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-EEEEECCCCEEEcCEEEEecCHH
Confidence 4555566655544 7899999999999987777 77999999889999999999863
No 285
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.52 E-value=0.00045 Score=71.65 Aligned_cols=94 Identities=13% Similarity=0.209 Sum_probs=66.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC----------------------------C---------CC---
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR----------------------------G---------FD--- 285 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~----------------------------~---------~~--- 285 (551)
.+++|||+|+.|+.+|..|++.|.+|+++++.. +.. . ++
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWET 83 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 479999999999999999999999999999863 100 0 00
Q ss_pred ---------HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 286 ---------EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 286 ---------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
..+...+.+.+++.|++++.++ +..+. .. .|.+ +|+++.+|.+|+|||.+|....
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i~--~~---~v~~-~g~~~~~d~lviAtGs~p~~p~ 147 (450)
T 1ges_A 84 LIASRTAYIDRIHTSYENVLGKNNVDVIKGF-ARFVD--AK---TLEV-NGETITADHILIATGGRPSHPD 147 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CEEEE--TT---EEEE-TTEEEEEEEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEec--CC---EEEE-CCEEEEeCEEEECCCCCCCCCC
Confidence 0111123345577899999884 44453 22 2444 6778999999999999887643
No 286
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.51 E-value=4.1e-05 Score=79.64 Aligned_cols=91 Identities=18% Similarity=0.152 Sum_probs=69.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHh-C------CCeEEEEeecCccC--------CC--CCHHHHHHHHHHHHhcCcEEEcCc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSG-L------TSEVHVFIRQKKVL--------RG--FDEDIRDFVAEQMSLRGIEFHTEE 307 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~-~------g~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~ 307 (551)
+++|+|||+|+.|+.+|..|.+ . |.+|+++++.+.+. +. ...++...+.+.+++.|++++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999999 7 99999999986543 21 234567778888888999999885
Q ss_pred ccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcC-CCC
Q 008841 308 SPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRR-PNT 345 (551)
Q Consensus 308 ~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~-p~~ 345 (551)
.+ +.. |.+.++ .+.+|.||+|||.. |..
T Consensus 83 ~v------~~~---v~~~~~-~~~~d~lViAtG~~~~~~ 111 (456)
T 1lqt_A 83 VV------GEH---VQPGEL-SERYDAVIYAVGAQSDRM 111 (456)
T ss_dssp CB------TTT---BCHHHH-HHHSSEEEECCCCCEECC
T ss_pred EE------CCE---EEECCC-eEeCCEEEEeeCCCCCCC
Confidence 53 222 444455 37899999999997 443
No 287
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.51 E-value=0.00031 Score=74.42 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=69.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc---------------------------------CCCC------CH
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV---------------------------------LRGF------DE 286 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~---------------------------------l~~~------~~ 286 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++.+ ..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 123 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGIK 123 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhHH
Confidence 57999999999999999999999999999998732 1110 11
Q ss_pred HHHHHH----H---HHH-----HhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCCC
Q 008841 287 DIRDFV----A---EQM-----SLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 287 ~~~~~l----~---~~l-----~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
++.+.+ . +.+ ++.|++++++.++..+.. . .|.+. |+++.+|.+|+|||.+|....
T Consensus 124 ~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~---~v~~~-g~~~~~d~lViATGs~p~~p~ 190 (523)
T 1mo9_A 124 EVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--H---TVEAA-GKVFKAKNLILAVGAGPGTLD 190 (523)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--T---EEEET-TEEEEBSCEEECCCEECCCCC
T ss_pred HHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--C---EEEEC-CEEEEeCEEEECCCCCCCCCC
Confidence 222222 2 455 778999996668877752 2 24444 678999999999999887643
No 288
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.51 E-value=5.8e-05 Score=77.03 Aligned_cols=31 Identities=32% Similarity=0.386 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
.+|+||||||+|+++|..|++.|++|+|+|+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 4799999999999999999999999999994
No 289
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.47 E-value=0.00022 Score=75.45 Aligned_cols=98 Identities=19% Similarity=0.161 Sum_probs=68.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc--------cC------------------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK--------VL------------------------------------ 281 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~--------~l------------------------------------ 281 (551)
-.|+|||+|+.|+.+|..+++.|.+|+++++.+. +-
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 112 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 112 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4799999999999999999999999999997430 00
Q ss_pred -CCCCH------------HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCe--EEEeeEEEEecCcCCCCC
Q 008841 282 -RGFDE------------DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGT--VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 282 -~~~~~------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~--~i~~d~vi~a~G~~p~~~ 346 (551)
..++- .+...+...++..||+++.+. +..+. .+. +.|.+.+|+ ++.+|.||+|||.+|...
T Consensus 113 ~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d--~~~-v~v~~~~g~~~~i~~d~lViATGs~p~~p 188 (519)
T 3qfa_A 113 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIG--PHR-IKATNNKGKEKIYSAERFLIATGERPRYL 188 (519)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE--TTE-EEEECTTCCCCEEEEEEEEECCCEEECCC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee--CCE-EEEEcCCCCEEEEECCEEEEECCCCcCCC
Confidence 00010 011112345667899998773 44332 222 667777775 799999999999988764
Q ss_pred C
Q 008841 347 N 347 (551)
Q Consensus 347 ~ 347 (551)
.
T Consensus 189 ~ 189 (519)
T 3qfa_A 189 G 189 (519)
T ss_dssp C
T ss_pred C
Confidence 3
No 290
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.47 E-value=5.4e-05 Score=86.67 Aligned_cols=93 Identities=23% Similarity=0.370 Sum_probs=71.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCC-eEEEEeecCccC-------CC--CCHHHHHHHHHHHHhcCcEEEcCcccEEEEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTS-EVHVFIRQKKVL-------RG--FDEDIRDFVAEQMSLRGIEFHTEESPQAILK 314 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~-~Vtlv~~~~~~l-------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~ 314 (551)
.++|+|||+|+.|+.+|..|++.|. +|+++++.+.+. +. ++.++.+...+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999999 799999976542 21 3556666677888999999999977631
Q ss_pred cCCceEEEEECCCeEEEeeEEEEecCc-CCCC
Q 008841 315 STDGSLSVKTNKGTVDGFSHVMFATGR-RPNT 345 (551)
Q Consensus 315 ~~~~~~~V~~~~G~~i~~d~vi~a~G~-~p~~ 345 (551)
.. +++.+++++.+|.||+|||. .|..
T Consensus 264 --~~---v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 --NE---ITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp --TS---BCHHHHHHTTCCEEEECCCCCEECC
T ss_pred --ce---EEhhhcCccCCCEEEEecCCCCCCC
Confidence 11 33444445789999999998 4754
No 291
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.46 E-value=0.00034 Score=72.90 Aligned_cols=93 Identities=19% Similarity=0.246 Sum_probs=66.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC--------------------------------C----CCCH---
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL--------------------------------R----GFDE--- 286 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l--------------------------------~----~~~~--- 286 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.. +. . ..+-
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 83 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPRL 83 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHHH
Confidence 479999999999999999999999999999863 10 0 0110
Q ss_pred ---------HHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 287 ---------DIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 287 ---------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
.+...+.+.+++.||+++.++ +..+. .. .|.+ +|+++.+|.+|+|||.+|...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~--~~---~v~~-~g~~~~~d~lviAtGs~p~~p 145 (463)
T 2r9z_A 84 VAGRDRYIGAINSFWDGYVERLGITRVDGH-ARFVD--AH---TIEV-EGQRLSADHIVIATGGRPIVP 145 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEE--TT---EEEE-TTEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEcc--CC---EEEE-CCEEEEcCEEEECCCCCCCCC
Confidence 111223445677899999884 44442 22 2444 677899999999999988764
No 292
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.45 E-value=0.00027 Score=73.62 Aligned_cols=93 Identities=18% Similarity=0.165 Sum_probs=65.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC---------C--------------------------CCCH-HHH
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL---------R--------------------------GFDE-DIR 289 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l---------~--------------------------~~~~-~~~ 289 (551)
.+++|||+|+.|+.+|..+++.|.+|+++++.+ +. | ..+. .+.
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 85 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLG 85 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHHH
Confidence 479999999999999999999999999999875 10 0 0010 010
Q ss_pred -----------HHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 290 -----------DFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 290 -----------~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
..+.+.+++.||+++.++.+ .+ +.+ .|.+. |+++.+|.+|+|||.+|...
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~~---~v~v~-g~~~~~d~lViATGs~p~~p 146 (464)
T 2eq6_A 86 GWRDQVVKKLTGGVGTLLKGNGVELLRGFAR-LV--GPK---EVEVG-GERYGAKSLILATGSEPLEL 146 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCEE-EE--ETT---EEEET-TEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEeeeEE-Ec--cCC---EEEEc-cEEEEeCEEEEcCCCCCCCC
Confidence 11244567789999988543 33 222 24444 67899999999999988753
No 293
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.44 E-value=0.00032 Score=73.48 Aligned_cols=92 Identities=12% Similarity=0.167 Sum_probs=67.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC------------------------------------CCC----
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR------------------------------------GFD---- 285 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~------------------------------------~~~---- 285 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.. +.. .++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 105 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKL 105 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 479999999999999999999999999999832 100 000
Q ss_pred --------HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEEC-CCeEEEeeEEEEecCcCCC
Q 008841 286 --------EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN-KGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 --------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~-~G~~i~~d~vi~a~G~~p~ 344 (551)
..+...+.+.+++.|++++.+ .+..+. .. .+.+. +++.+.+|.+|+|+|..|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~~---~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 106 VAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--EH---TLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TT---EEEETTTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--CC---EEEEecCCeEEEeCEEEEccCCCcc
Confidence 122333556677889999988 555553 22 25554 7778999999999999887
No 294
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.43 E-value=0.00031 Score=73.46 Aligned_cols=96 Identities=17% Similarity=0.224 Sum_probs=68.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc----------------------------------CCCC-------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV----------------------------------LRGF------- 284 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~----------------------------------l~~~------- 284 (551)
-.|+|||+|+.|+.+|..|++.|.+|+++++.+.+ +..+
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~ 83 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEV 83 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 36999999999999999999999999999987510 0000
Q ss_pred --C------------HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCCC
Q 008841 285 --D------------EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 285 --~------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~~ 345 (551)
+ ..+...+...+++.|++++.+..+ .+ +.+. +.|.+.+| +++.+|.+|+|||.+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~~--~~~~-~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 156 (476)
T 3lad_A 84 AIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGK-LL--AGKK-VEVTAADGSSQVLDTENVILASGSKPVE 156 (476)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEE-EC--STTC-EEEECTTSCEEEECCSCEEECCCEEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cCCE-EEEEcCCCceEEEEcCEEEEcCCCCCCC
Confidence 0 011122335567789999888432 22 3333 77777777 578999999999998864
No 295
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.43 E-value=6.5e-05 Score=75.17 Aligned_cols=48 Identities=15% Similarity=0.345 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~ 345 (551)
+..+...+.+.+++.|++++. ++|++++..+ .+.+|.||+|+|.....
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~------------~~~a~~VV~A~G~~s~~ 188 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEVA------------REGADVIVNCTGVWAGA 188 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH------------HTTCSEEEECCGGGGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh------------cCCCCEEEECCCcChHh
Confidence 456778888999999999998 7887774321 16689999999986643
No 296
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.42 E-value=0.00012 Score=79.94 Aligned_cols=42 Identities=31% Similarity=0.501 Sum_probs=36.0
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCee
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTC 120 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~ 120 (551)
...+||+|||||++|+++|..|++.|++|+|+|+ ...+||.+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~---------~~~~gg~~ 146 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEA---------RDRVGGRV 146 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECS---------SSSSBTTC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEec---------CCCCCCcc
Confidence 3468999999999999999999999999999993 45566654
No 297
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.40 E-value=0.00059 Score=71.80 Aligned_cols=94 Identities=15% Similarity=0.235 Sum_probs=64.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcccC
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYG 152 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 152 (551)
.+|+|||||+.|+-+|..|++.|.+|+++|. ...+ +|
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~---------~~~~---------l~------------------------- 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFAR---------GNRI---------LR------------------------- 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECS---------SSSS---------CT-------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEec---------CCcc---------Cc-------------------------
Confidence 5799999999999999999999999999992 1110 00
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEecC---C--EEEE-cCEE-EEeCeEEEcCCCCCCCC
Q 008841 153 TEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIVDP---H--TVDV-DGKL-YSARHILISVGGRPFIP 224 (551)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i~~---~--~v~v-~g~~-~~~d~lviAtG~~p~~p 224 (551)
.++. . +...+.+.+++.||+++.+. +..++. . .+.+ +++. +.+|.|++|+|.+|+..
T Consensus 214 ---~~d~-~-----------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 214 ---KFDE-S-----------VINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp ---TSCH-H-----------HHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred ---ccch-h-----------hHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 0111 1 11223345677799998773 444431 2 3444 6666 99999999999998763
No 298
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.38 E-value=0.00012 Score=74.22 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEcc
Q 008841 73 FDLFTIGAGSGGVRASRFAANF--GASVAICEL 103 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~ 103 (551)
+||+|||||++|+++|+.|++. |++|+|+|+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~ 33 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEK 33 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 4899999999999999999998 999999994
No 299
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.38 E-value=0.00069 Score=70.68 Aligned_cols=98 Identities=18% Similarity=0.254 Sum_probs=71.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc-------------CCC------------------------------
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV-------------LRG------------------------------ 283 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~-------------l~~------------------------------ 283 (551)
.|+|||+|..|+-+|..+++.|.+|+++++...- +..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 3899999999999999999999999999876100 000
Q ss_pred --------------C----------------------CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEEC-C
Q 008841 284 --------------F----------------------DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN-K 326 (551)
Q Consensus 284 --------------~----------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~-~ 326 (551)
+ ...+.+.+.+.+++.|++++.++.+ ++..+++.+..+... +
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~ 159 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKR 159 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeC
Confidence 0 0123445556667789999999999 997766553345543 2
Q ss_pred CeEEEeeEEEEecCcCCCC
Q 008841 327 GTVDGFSHVMFATGRRPNT 345 (551)
Q Consensus 327 G~~i~~d~vi~a~G~~p~~ 345 (551)
+.++.+|.||+|+|..+..
T Consensus 160 ~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 160 GLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp EEECCCSEEEECCCCCGGG
T ss_pred CCeEEeeeEEECCCCCccc
Confidence 2357899999999987754
No 300
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.37 E-value=0.0006 Score=71.53 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=66.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHh-CCCeEEEEee--------cCccCC----------------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSG-LTSEVHVFIR--------QKKVLR---------------------------------- 282 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~-~g~~Vtlv~~--------~~~~l~---------------------------------- 282 (551)
.+|+|||+|+.|+.+|..+++ .|.+|+++++ .+.+-.
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~ 83 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELD 83 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcccC
Confidence 379999999999999999999 9999999992 222100
Q ss_pred ----CCC-HH-----------HHHHHHHHHHhc-CcEEEcCcccEEEEEcCCceEEEEE---CCC---eEEEeeEEEEec
Q 008841 283 ----GFD-ED-----------IRDFVAEQMSLR-GIEFHTEESPQAILKSTDGSLSVKT---NKG---TVDGFSHVMFAT 339 (551)
Q Consensus 283 ----~~~-~~-----------~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~V~~---~~G---~~i~~d~vi~a~ 339 (551)
.++ +. +...+.+.+++. ||+++.++ +..+. .+ .+.+.. .+| +++.+|.+|+||
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~~-~v~v~~~~~~~g~~~~~~~~d~lviAt 159 (490)
T 1fec_A 84 RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD--NH-TVLVRESADPNSAVLETLDTEYILLAT 159 (490)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE--TT-EEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee--CC-EEEEEeeccCCCCceEEEEcCEEEEeC
Confidence 001 01 112234456677 99999885 55553 22 244443 366 679999999999
Q ss_pred CcCCCCC
Q 008841 340 GRRPNTK 346 (551)
Q Consensus 340 G~~p~~~ 346 (551)
|.+|...
T Consensus 160 Gs~p~~p 166 (490)
T 1fec_A 160 GSWPQHL 166 (490)
T ss_dssp CEEECCC
T ss_pred CCCCCCC
Confidence 9988754
No 301
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.36 E-value=0.0003 Score=73.29 Aligned_cols=94 Identities=16% Similarity=0.242 Sum_probs=67.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC------------------------------------CCCC----
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL------------------------------------RGFD---- 285 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l------------------------------------~~~~---- 285 (551)
-+|+|||+|+.|+.+|..|++.|.+|+++++.. +- +.++
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 84 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKL 84 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHHH
Confidence 379999999999999999999999999999832 10 0011
Q ss_pred --------HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE-CCCeEEEeeEEEEecCcCCC-CC
Q 008841 286 --------EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT-NKGTVDGFSHVMFATGRRPN-TK 346 (551)
Q Consensus 286 --------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~-~~G~~i~~d~vi~a~G~~p~-~~ 346 (551)
..+...+.+.+++.|++++.+ .+..+ +. ..+.+ .+++++.+|.+|+|+|..|. ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i---~~--~~v~~~~~~~~~~~d~lviAtG~~p~~~p 149 (463)
T 4dna_A 85 VAAKEQEIARLEGLYRKGLANAGAEILDT-RAELA---GP--NTVKLLASGKTVTAERIVIAVGGHPSPHD 149 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEES---SS--SEEEETTTTEEEEEEEEEECCCEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEe---eC--CEEEEecCCeEEEeCEEEEecCCCcccCC
Confidence 022233455667789999888 44443 22 23555 57788999999999999887 53
No 302
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.35 E-value=0.00042 Score=78.76 Aligned_cols=100 Identities=12% Similarity=0.064 Sum_probs=71.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC--------C----CHHHHHHHHHHHHhc-CcEEEcCcccEEE
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG--------F----DEDIRDFVAEQMSLR-GIEFHTEESPQAI 312 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~--------~----~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i 312 (551)
.+|+|||+|+.|+.+|..+++.|.+|+++++.+.+... + ..++...+.+.+.+. +++++.+++|..+
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 57999999999999999999999999999987643200 1 123344455566664 9999999999888
Q ss_pred EEcCCceEEEE---------E------CCCeEEEeeEEEEecCcCCCCC
Q 008841 313 LKSTDGSLSVK---------T------NKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 313 ~~~~~~~~~V~---------~------~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
...+ ....+. + .++.++.+|.||+|||..|...
T Consensus 209 ~~~~-~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~ 256 (965)
T 2gag_A 209 YDAN-YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPI 256 (965)
T ss_dssp ETTT-EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCC
T ss_pred ecCC-ceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCC
Confidence 6332 111111 1 1123689999999999987654
No 303
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.35 E-value=0.00024 Score=77.64 Aligned_cols=87 Identities=20% Similarity=0.299 Sum_probs=66.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC---------CCCC--HHHHHHHHHHHHhcCcEEEcCcccEEEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL---------RGFD--EDIRDFVAEQMSLRGIEFHTEESPQAIL 313 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l---------~~~~--~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 313 (551)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +... .++...+.+.+++.||+++.++.+...
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~- 451 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTAD- 451 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCSS-
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecHH-
Confidence 4689999999999999999999999999999876541 2111 233455677788899999998765320
Q ss_pred EcCCceEEEEECCCeEE-EeeEEEEecCcCCCCCC
Q 008841 314 KSTDGSLSVKTNKGTVD-GFSHVMFATGRRPNTKN 347 (551)
Q Consensus 314 ~~~~~~~~V~~~~G~~i-~~d~vi~a~G~~p~~~~ 347 (551)
.+ .+|.||+|||.+|....
T Consensus 452 ---------------~~~~~d~lviAtG~~p~~~~ 471 (671)
T 1ps9_A 452 ---------------QLQAFDETILASGIVPRTPP 471 (671)
T ss_dssp ---------------SSCCSSEEEECCCEEECCCC
T ss_pred ---------------HhhcCCEEEEccCCCcCCCC
Confidence 13 78999999999887643
No 304
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.35 E-value=0.00016 Score=80.51 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=31.5
Q ss_pred CCCccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 70 HYDFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 70 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
...+||+|||||++||++|+.|++.|++|+|+|+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~ 309 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEA 309 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEe
Confidence 3468999999999999999999999999999993
No 305
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.33 E-value=0.00021 Score=74.72 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=67.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC------------------------------------CCCC----
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL------------------------------------RGFD---- 285 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l------------------------------------~~~~---- 285 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.. +. ..++
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 99 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVI 99 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHHH
Confidence 479999999999999999999999999999763 10 0011
Q ss_pred --------HHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 286 --------EDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 286 --------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
..+...+...+++.|++++.+. +..+. ... ..|. .+++++.+|.||+|||..|...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~~--~~~-~~v~-~~g~~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 100 KEKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFTS--DPK-PTIE-VSGKKYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEECS--CSS-CEEE-ETTEEEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEee--CCe-EEEE-ECCEEEEeeEEEEccCCCCCCC
Confidence 1122334556677899998873 33332 222 3455 4667899999999999988754
No 306
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.30 E-value=0.00064 Score=71.39 Aligned_cols=94 Identities=19% Similarity=0.292 Sum_probs=64.6
Q ss_pred ccEEEECCChHHHHHHHHHHhC---CCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCc
Q 008841 73 FDLFTIGAGSGGVRASRFAANF---GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW 149 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~---G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 149 (551)
.+++|||||..|+..|..|++. |.+|+||+. ...+ +|
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~---------~~~~---------l~---------------------- 231 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYR---------NNLI---------LR---------------------- 231 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEES---------SSSS---------CT----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEc---------CCcc---------cc----------------------
Confidence 5799999999999999999998 999999992 1110 00
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe-EEEEecC---C--EEEE-cCEEEEeCeEEEcCCCCCC
Q 008841 150 KYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEG-RGKIVDP---H--TVDV-DGKLYSARHILISVGGRPF 222 (551)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~i~~---~--~v~v-~g~~~~~d~lviAtG~~p~ 222 (551)
.++. . +...+.+.+++.||+++.+ .+..++. . .+.+ +++.+.+|.||+|+|.+|+
T Consensus 232 ------~~d~-~-----------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 232 ------GFDE-T-----------IREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp ------TSCH-H-----------HHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred ------ccCH-H-----------HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 0111 1 1122334566779999887 3444431 2 3444 6778999999999998887
Q ss_pred CC
Q 008841 223 IP 224 (551)
Q Consensus 223 ~p 224 (551)
..
T Consensus 294 ~~ 295 (495)
T 2wpf_A 294 TN 295 (495)
T ss_dssp CG
T ss_pred cc
Confidence 53
No 307
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.28 E-value=0.001 Score=70.47 Aligned_cols=93 Identities=18% Similarity=0.165 Sum_probs=64.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeeccCCCcchHHHHHhhhhhhHhhhccCCCcccC
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYG 152 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 152 (551)
.+++|||||+.|+-.|..+++.|.+|+|++ +..+ +|
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~----------~~~~---------L~------------------------- 259 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAV----------RSIV---------LR------------------------- 259 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEE----------SSCS---------ST-------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEec----------cccc---------cc-------------------------
Confidence 579999999999999999999999999998 2110 01
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEEeE-EEEe--cCCEEEE---cCEEEEeCeEEEcCCCCCCCC
Q 008841 153 TEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGR-GKIV--DPHTVDV---DGKLYSARHILISVGGRPFIP 224 (551)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~i--~~~~v~v---~g~~~~~d~lviAtG~~p~~p 224 (551)
..|.+ +...+...+++.|+++..+. +..+ ....+.+ ++..+.+|.|++|+|-+|+..
T Consensus 260 ---~~D~e------------i~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 260 ---GFDQQ------------CAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp ---TSCHH------------HHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred ---ccchh------------HHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 11111 11223345677899998873 2222 2334433 667888999999999988764
No 308
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.27 E-value=0.0016 Score=68.06 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=66.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec---C----c---------------------------------c-CC--
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ---K----K---------------------------------V-LR-- 282 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~---~----~---------------------------------~-l~-- 282 (551)
-.|+|||+|+.|+.+|..+++.|.+|+++++. + . + +.
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 89 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVD 89 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcccC
Confidence 47999999999999999999999999999831 0 0 0 00
Q ss_pred ---CCCH-HHH-----------HHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCe-EEEeeEEEEecCcCCCCC
Q 008841 283 ---GFDE-DIR-----------DFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGT-VDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 283 ---~~~~-~~~-----------~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~-~i~~d~vi~a~G~~p~~~ 346 (551)
.++- .+. ..+...++..||+++.+. ..-+ +.+ .+.|.+.+|+ ++.+|.+|+|||.+|...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-a~~~--~~~-~v~v~~~~g~~~~~~d~lviATGs~p~~p 165 (483)
T 3dgh_A 90 DKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGL-GSFV--DSH-TLLAKLKSGERTITAQTFVIAVGGRPRYP 165 (483)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE--ETT-EEEEECTTCCEEEEEEEEEECCCEEECCC
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEc--cCC-EEEEEeCCCeEEEEcCEEEEeCCCCcCCC
Confidence 0111 111 112244667899988773 2222 222 3677777774 799999999999988764
Q ss_pred C
Q 008841 347 N 347 (551)
Q Consensus 347 ~ 347 (551)
.
T Consensus 166 ~ 166 (483)
T 3dgh_A 166 D 166 (483)
T ss_dssp S
T ss_pred C
Confidence 3
No 309
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.26 E-value=0.00013 Score=79.99 Aligned_cols=87 Identities=20% Similarity=0.206 Sum_probs=67.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccC---------CC--CCHHHHHHHHHHHHhc-CcEEEcCcccEEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVL---------RG--FDEDIRDFVAEQMSLR-GIEFHTEESPQAI 312 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l---------~~--~~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i 312 (551)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++. ||+++.++.++
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~-- 468 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT-- 468 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC--
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec--
Confidence 4689999999999999999999999999999976431 22 1234566677778887 99999886542
Q ss_pred EEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 313 LKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 313 ~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
..+++++.+|.||+|+|..|.
T Consensus 469 -----------~~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 469 -----------GDDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp -----------HHHHHHTTCCEEEECCCEEEC
T ss_pred -----------HHHHhhcCCCEEEEcCCCccc
Confidence 123345789999999999865
No 310
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.23 E-value=0.0012 Score=69.15 Aligned_cols=97 Identities=19% Similarity=0.175 Sum_probs=66.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC--------ccC------------------------------------
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK--------KVL------------------------------------ 281 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~--------~~l------------------------------------ 281 (551)
-.|+|||+|+.|+.+|..+++.|.+|+++++.+ .+-
T Consensus 7 ~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 86 (488)
T 3dgz_A 7 FDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQ 86 (488)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 379999999999999999999999999998621 000
Q ss_pred -CCCCH-HH-----------HHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCCCC
Q 008841 282 -RGFDE-DI-----------RDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 282 -~~~~~-~~-----------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~~~ 346 (551)
...+- .+ ...+...+++.||+++.+. +..+ +...+.|.+.+| .++.+|.||+|||.+|...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~---~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p 162 (488)
T 3dgz_A 87 PVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV---DEHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 162 (488)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES---SSSEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc---cCCeEEEEeCCCceEEEECCEEEEcCCCCCCCC
Confidence 01110 11 1113345667899987663 3322 223366777777 4799999999999988754
No 311
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.15 E-value=0.0021 Score=69.17 Aligned_cols=99 Identities=14% Similarity=0.192 Sum_probs=65.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec-Ccc------CC--------------------------------CCC
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ-KKV------LR--------------------------------GFD 285 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~-~~~------l~--------------------------------~~~ 285 (551)
..+|+|||+|+.|+.+|..+++.|.+|+++++. +.. +. .++
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~~ 186 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLD 186 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcccc
Confidence 458999999999999999999999999999962 210 00 000
Q ss_pred --------HHHHHHH-----------HHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCC--eEEEeeEEEEecCcCCC
Q 008841 286 --------EDIRDFV-----------AEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKG--TVDGFSHVMFATGRRPN 344 (551)
Q Consensus 286 --------~~~~~~l-----------~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G--~~i~~d~vi~a~G~~p~ 344 (551)
+++.+.+ ...+++.||+++.+ ....+. .. .+.+...+| +++.+|.||+|||.+|.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~--~~-~v~v~~~~g~~~~~~~d~lviAtGs~p~ 262 (598)
T 2x8g_A 187 RSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLIS--PH-EVQITDKNQKVSTITGNKIILATGERPK 262 (598)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEE--TT-EEEEECTTCCEEEEEEEEEEECCCEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcC--CC-EEEEEeCCCCeEEEEeCEEEEeCCCCCC
Confidence 1111111 22355678888866 233332 22 255666677 46899999999999887
Q ss_pred CCC
Q 008841 345 TKN 347 (551)
Q Consensus 345 ~~~ 347 (551)
...
T Consensus 263 ~p~ 265 (598)
T 2x8g_A 263 YPE 265 (598)
T ss_dssp CCS
T ss_pred CCC
Confidence 643
No 312
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.13 E-value=0.0017 Score=69.75 Aligned_cols=97 Identities=18% Similarity=0.090 Sum_probs=71.2
Q ss_pred eEEEEcCcHHHHHHHHHHHhCC--CeEEEEeecCccCC-----------C------------------------------
Q 008841 247 KIAIVGGGYIALEFAGIFSGLT--SEVHVFIRQKKVLR-----------G------------------------------ 283 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g--~~Vtlv~~~~~~l~-----------~------------------------------ 283 (551)
.|+|||+|..|+-+|..|++.| .+|.++++.+.... .
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~ 86 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYF 86 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 6999999999999999999999 99999997532100 0
Q ss_pred -----------------C----------------------------CHHHHHHHHHHHHhcC-cEEEcCcccEEEEEcCC
Q 008841 284 -----------------F----------------------------DEDIRDFVAEQMSLRG-IEFHTEESPQAILKSTD 317 (551)
Q Consensus 284 -----------------~----------------------------~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~~~~ 317 (551)
| ...+...+.+.+++.| |+++.++.|+++..+++
T Consensus 87 ~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g 166 (602)
T 1kf6_A 87 VHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDG 166 (602)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCC
Confidence 0 0123344455566678 99999999999987765
Q ss_pred ceEEEE---ECCCe--EEEeeEEEEecCcCC
Q 008841 318 GSLSVK---TNKGT--VDGFSHVMFATGRRP 343 (551)
Q Consensus 318 ~~~~V~---~~~G~--~i~~d~vi~a~G~~p 343 (551)
.+..|. +.+|+ .+.++.||+|+|...
T Consensus 167 ~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 167 HVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp EEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred EEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 433443 25776 689999999999743
No 313
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.10 E-value=0.0003 Score=74.90 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=41.5
Q ss_pred HHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECC---Ce--EE---EeeEEEEecCcCCCCCC
Q 008841 291 FVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNK---GT--VD---GFSHVMFATGRRPNTKN 347 (551)
Q Consensus 291 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~---G~--~i---~~d~vi~a~G~~p~~~~ 347 (551)
.+....++.|+++++++.|++|..+++....|++.+ |+ ++ .++.||+|+|......+
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 344444446999999999999988765556677754 64 34 78999999998655444
No 314
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.08 E-value=0.00018 Score=79.31 Aligned_cols=87 Identities=23% Similarity=0.236 Sum_probs=59.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCC---------CCC--HHHHHHHHHHHHhc------CcEEEcCc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLR---------GFD--EDIRDFVAEQMSLR------GIEFHTEE 307 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~---------~~~--~~~~~~l~~~l~~~------Gv~i~~~~ 307 (551)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ... ..+.+.+.+.++.. ++++..++
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~ 468 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQK 468 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCe
Confidence 46899999999999999999999999999999775421 111 12223333333332 45554432
Q ss_pred ccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 308 SPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 308 ~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
. +.+.++..+.+|.||+|||..|.
T Consensus 469 ~-------------v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 469 P-------------MTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp C-------------CCHHHHHTSCCSEEEECCCEEEC
T ss_pred E-------------EehhhccccCCCEEEEcCCCCcc
Confidence 1 23334445889999999999864
No 315
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.04 E-value=0.0018 Score=67.93 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|||||+.|+.+|..|++.|.+|++++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~ 204 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFG 204 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEE
Confidence 579999999999999999999999999999
No 316
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.00 E-value=0.00035 Score=74.03 Aligned_cols=51 Identities=8% Similarity=0.086 Sum_probs=37.4
Q ss_pred HhcCcEEEcCcccEEEEEcCCceEEEEE--CCCe-EEEeeEEEEecCcCCCCCC
Q 008841 297 SLRGIEFHTEESPQAILKSTDGSLSVKT--NKGT-VDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 297 ~~~Gv~i~~~~~v~~i~~~~~~~~~V~~--~~G~-~i~~d~vi~a~G~~p~~~~ 347 (551)
.+.++.+..++.|.++..+++....|.. .++. .+.++.||+|.|..-...+
T Consensus 222 ~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~L 275 (526)
T 3t37_A 222 GRKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPAL 275 (526)
T ss_dssp TCTTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHH
T ss_pred CCCCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcch
Confidence 4568999999999999887776455544 3332 5778999999997554444
No 317
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.96 E-value=0.00031 Score=74.57 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=30.2
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
.+||+||||||+||+.+|.+|++ |.+|+|+|+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEa 56 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLER 56 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECS
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEec
Confidence 46999999999999999999999 999999993
No 318
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.93 E-value=0.00049 Score=73.40 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=30.6
Q ss_pred CCccEEEECCChHHHHHHHHHHhCC-CcEEEEcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFG-ASVAICEL 103 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G-~~V~liE~ 103 (551)
..||+||||||.||+.+|.+|++.+ .+|+|||+
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEa 38 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEA 38 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEec
Confidence 4699999999999999999999987 79999994
No 319
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.91 E-value=0.00044 Score=70.00 Aligned_cols=86 Identities=15% Similarity=0.223 Sum_probs=66.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCcc----------------------C-CC------------------
Q 008841 247 KIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKV----------------------L-RG------------------ 283 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~----------------------l-~~------------------ 283 (551)
+|+|||+|+.|+.+|..|++. |.+|+++++.+.+ . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 699999999999999999998 9999999987543 0 00
Q ss_pred --------------CCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 284 --------------FDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 284 --------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
...++.+.+.+.+++.|++++++++|++++.. +++.+|.||.|.|..+.
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------CGGGCSEEEECCGGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------ccccCCEEEECCCCCch
Confidence 01235566777778889999999998887421 12578999999998775
No 320
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.90 E-value=0.0024 Score=67.18 Aligned_cols=34 Identities=12% Similarity=0.118 Sum_probs=30.4
Q ss_pred eEEEEcCcHHHHHHHHHHHh-CCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSG-LTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~-~g~~Vtlv~~~~~~ 280 (551)
.|+|||+|..|+-+|..|++ .|.+|+++++.+++
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 69999999999999999987 59999999987654
No 321
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.75 E-value=0.00098 Score=70.20 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=32.9
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
++..+||++|||+|++|+.+|.+|++.|.+|+|||+
T Consensus 7 ~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~ 42 (507)
T 1coy_A 7 ADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEM 42 (507)
T ss_dssp CTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEEC
Confidence 445579999999999999999999999999999994
No 322
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.71 E-value=0.0015 Score=69.82 Aligned_cols=60 Identities=10% Similarity=0.062 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcC--CceEEEEECCCeEEEeeEEEEecCcCCC
Q 008841 285 DEDIRDFVAEQMSLRGIEFHTEESPQAILKST--DGSLSVKTNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 285 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~~V~~~~G~~i~~d~vi~a~G~~p~ 344 (551)
...+.+.+.+.++..|.++++++.|.+|..++ +++..|.+.+|+++.||.||......|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 45788999999999999999999999998776 4555677788999999999997776654
No 323
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.68 E-value=0.00088 Score=71.43 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=30.1
Q ss_pred CccEEEECCChHHHHHHHHHHh-CCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAAN-FGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~ 103 (551)
.||+||||||.||+.+|.+|++ .+.+|+|||+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEa 51 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIES 51 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECS
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEec
Confidence 6999999999999999999997 5899999995
No 324
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.67 E-value=0.004 Score=65.99 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=29.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
-.|+|||+|..|+-+|..+++ |.+|.++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 369999999999999999999 999999998653
No 325
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.67 E-value=0.00067 Score=73.59 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=29.9
Q ss_pred CccEEEECCChHHHHHHHHHHhCC--------CcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFG--------ASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G--------~~V~liE~ 103 (551)
.++|+|||||++||+||+.|++.| ++|+|+|+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~ 95 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEA 95 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEec
Confidence 478999999999999999999988 99999994
No 326
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.54 E-value=0.0014 Score=68.96 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=30.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
+||++|||+|++|+.+|.+|++.|.+|+|||+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~ 36 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEM 36 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeC
Confidence 58999999999999999999999999999994
No 327
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.51 E-value=0.001 Score=70.84 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=30.3
Q ss_pred CccEEEECCChHHHHHHHHHHh-CCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAAN-FGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~ 103 (551)
.||+||||||.||+.+|.+|++ .+.+|+|||+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEa 34 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEA 34 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECS
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEec
Confidence 4999999999999999999999 7999999994
No 328
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.33 E-value=0.008 Score=64.79 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=30.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
..|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 47 ~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~ 79 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYARELVGAGYKVAMFDIGE 79 (623)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCcEEEEeccC
Confidence 379999999999999999999999999998765
No 329
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.25 E-value=0.0025 Score=68.27 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=30.9
Q ss_pred CCccEEEECCChHHHHHHHHHHh-CCCcEEEEcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAAN-FGASVAICEL 103 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~ 103 (551)
.+||++|||+|++|+.+|.+|++ .|.+|+|||+
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~ 56 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEK 56 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEES
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEec
Confidence 35999999999999999999999 8999999994
No 330
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.21 E-value=0.0026 Score=67.60 Aligned_cols=33 Identities=30% Similarity=0.473 Sum_probs=30.7
Q ss_pred CCccEEEECCChHHHHHHHHHHhC-CCcEEEEcc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANF-GASVAICEL 103 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~ 103 (551)
..||++|||+|++|+.+|.+|++. |.+|+|+|+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~ 45 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEA 45 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEec
Confidence 359999999999999999999997 899999994
No 331
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.08 E-value=0.025 Score=59.28 Aligned_cols=100 Identities=15% Similarity=0.173 Sum_probs=69.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhCC--------------CeEEEEeecCcc-------CCC----------------------
Q 008841 247 KIAIVGGGYIALEFAGIFSGLT--------------SEVHVFIRQKKV-------LRG---------------------- 283 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g--------------~~Vtlv~~~~~~-------l~~---------------------- 283 (551)
.|+|||+|+.|+-+|..|.+.| ....++++.+.+ ++.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999999887632 345677765431 110
Q ss_pred --------------------C--CHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCC-------ceEEEEECCC-----eE
Q 008841 284 --------------------F--DEDIRDFVAEQMSLRGIEFHTEESPQAILKSTD-------GSLSVKTNKG-----TV 329 (551)
Q Consensus 284 --------------------~--~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-------~~~~V~~~~G-----~~ 329 (551)
+ -.++.+.++...++.+..+.++++|++++..+. ....|++.++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0 123445555555666778999999999986442 1356766543 36
Q ss_pred EEeeEEEEecCcCCCCC
Q 008841 330 DGFSHVMFATGRRPNTK 346 (551)
Q Consensus 330 i~~d~vi~a~G~~p~~~ 346 (551)
+.|+.||+|+|..|...
T Consensus 201 ~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEeCEEEECcCCCCCCC
Confidence 88999999999988765
No 332
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.38 E-value=0.012 Score=55.29 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=31.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999987654
No 333
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.05 E-value=0.041 Score=59.57 Aligned_cols=52 Identities=12% Similarity=-0.031 Sum_probs=36.7
Q ss_pred HHHHHHhc--CcEEEcCcccEEEEEcCC---ceEEEEE---CCCe--EEEeeEEEEecCcCC
Q 008841 292 VAEQMSLR--GIEFHTEESPQAILKSTD---GSLSVKT---NKGT--VDGFSHVMFATGRRP 343 (551)
Q Consensus 292 l~~~l~~~--Gv~i~~~~~v~~i~~~~~---~~~~V~~---~~G~--~i~~d~vi~a~G~~p 343 (551)
+.+.+++. ||+++.++.+.++..+++ .+..|.. .+|+ .+.++.||+|||-..
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 34444555 899999988888877665 4444433 4554 588999999999654
No 334
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.32 E-value=0.053 Score=45.88 Aligned_cols=31 Identities=13% Similarity=0.063 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
+-+|+|||.|..|...|..|.+.|++|+++|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid 37 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIE 37 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 4579999999999999999999999999999
No 335
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.25 E-value=0.029 Score=58.61 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=30.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
|+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 68999999999999999999999999999998765
No 336
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.20 E-value=0.048 Score=46.09 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+++|+|+|..|...|..|.+.|++|+++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 579999999999999999999999999999
No 337
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.13 E-value=0.052 Score=49.92 Aligned_cols=75 Identities=16% Similarity=0.192 Sum_probs=51.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEE
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVK 323 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~ 323 (551)
.+++|+|||+|.+|...+..|.+.|++|+++.+. +.++ +.+..++.+++++...-
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~------~~~~----l~~l~~~~~i~~i~~~~--------------- 84 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT------VSAE----INEWEAKGQLRVKRKKV--------------- 84 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS------CCHH----HHHHHHTTSCEEECSCC---------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC------CCHH----HHHHHHcCCcEEEECCC---------------
Confidence 3689999999999999999999999999999753 2333 34444555676653311
Q ss_pred ECCCeEEEeeEEEEecCcCCC
Q 008841 324 TNKGTVDGFSHVMFATGRRPN 344 (551)
Q Consensus 324 ~~~G~~i~~d~vi~a~G~~p~ 344 (551)
.....-.+|.||.|||-...
T Consensus 85 -~~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 85 -GEEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp -CGGGSSSCSEEEECCCCTHH
T ss_pred -CHhHhCCCCEEEECCCCHHH
Confidence 01111237999999887543
No 338
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.04 E-value=0.048 Score=45.75 Aligned_cols=30 Identities=13% Similarity=0.297 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
++|+|||+|..|...|..|.+.|++|+++|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLID 34 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 579999999999999999999999999999
No 339
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.81 E-value=0.05 Score=55.10 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=32.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 358999999999999999999999999999998754
No 340
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.77 E-value=0.057 Score=56.33 Aligned_cols=61 Identities=20% Similarity=0.312 Sum_probs=46.7
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCC----------HH--------HHHHHHHHHHhcCcEEE
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFD----------ED--------IRDFVAEQMSLRGIEFH 304 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~----------~~--------~~~~l~~~l~~~Gv~i~ 304 (551)
.+.+|+|||+|.+|+.+|..|.+.|.+|+++++.+++..... .+ ....+.+.+++.|+++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 467899999999999999999999999999998876543210 01 13556778888888653
No 341
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.61 E-value=0.096 Score=45.07 Aligned_cols=38 Identities=24% Similarity=0.226 Sum_probs=32.9
Q ss_pred CCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 242 PSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 242 ~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
....++++|+|+|.+|..++..|.+.|.+|+++++.+.
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 33467999999999999999999999999999988653
No 342
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.60 E-value=0.062 Score=43.48 Aligned_cols=31 Identities=19% Similarity=0.364 Sum_probs=28.9
Q ss_pred CccEEEECCChHHHHHHHHHHhCC-CcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFG-ASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G-~~V~liE 102 (551)
+.+|+|+|+|..|...+..|.+.| ++|++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~ 36 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVAD 36 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 357999999999999999999999 8999999
No 343
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.60 E-value=0.081 Score=51.91 Aligned_cols=78 Identities=14% Similarity=0.072 Sum_probs=56.9
Q ss_pred CCeEEEEcCcHHHHH-HHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEE
Q 008841 245 PEKIAIVGGGYIALE-FAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVK 323 (551)
Q Consensus 245 ~~~vvViG~G~~g~e-~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~ 323 (551)
.+++.+||.|-+|+. +|..|.+.|.+|++.+..+. + . ..+.|++.|++++.+.....+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~-----~-~----~~~~L~~~gi~v~~g~~~~~l----------- 62 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY-----P-P----MSTQLEALGIDVYEGFDAAQL----------- 62 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC-----T-T----HHHHHHHTTCEEEESCCGGGG-----------
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC-----c-H----HHHHHHhCCCEEECCCCHHHc-----------
Confidence 578999999999996 89999999999999987653 1 1 235577889998876332111
Q ss_pred ECCCeEEEeeEEEEecCcCCCCCC
Q 008841 324 TNKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 324 ~~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
.. -.+|.||++.|..|....
T Consensus 63 -~~---~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 63 -DE---FKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp -GS---CCCSEEEECTTCCTTCHH
T ss_pred -CC---CCCCEEEECCCcCCCCHH
Confidence 00 136899999998776543
No 344
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.54 E-value=0.08 Score=45.45 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=29.2
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
+.+++|+|+|..|...|..|.+.|++|+++|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid 33 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVIS 33 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 3579999999999999999999999999999
No 345
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.51 E-value=0.075 Score=45.79 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|||+|..|...|..|.+.|.+|+++|
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid 49 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVD 49 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 579999999999999999999999999999
No 346
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=93.38 E-value=0.068 Score=54.24 Aligned_cols=35 Identities=20% Similarity=0.181 Sum_probs=32.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCe-EEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSE-VHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~-Vtlv~~~~~~ 280 (551)
.+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 4799999999999999999999999 9999998754
No 347
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.36 E-value=0.098 Score=53.86 Aligned_cols=80 Identities=16% Similarity=0.107 Sum_probs=58.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKT 324 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~ 324 (551)
++++.|||.|.+|+.+|..|.+.|.+|++.+..+.-. ....+.|++.|++++.+....++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~--------~~~~~~L~~~gi~~~~g~~~~~~------------ 68 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE--------NPTAQSLLEEGIKVVCGSHPLEL------------ 68 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG--------CHHHHHHHHTTCEEEESCCCGGG------------
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC--------ChHHHHHHhCCCEEEECCChHHh------------
Confidence 6899999999999999999999999999998765210 12335677889999877431100
Q ss_pred CCCeEEEeeEEEEecCcCCCCCC
Q 008841 325 NKGTVDGFSHVMFATGRRPNTKN 347 (551)
Q Consensus 325 ~~G~~i~~d~vi~a~G~~p~~~~ 347 (551)
-++ .+|.||+++|..+....
T Consensus 69 ~~~---~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 69 LDE---DFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp GGS---CEEEEEECTTSCTTSHH
T ss_pred hcC---CCCEEEECCcCCCCChh
Confidence 001 17999999999876543
No 348
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.24 E-value=0.07 Score=53.38 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=31.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4899999999999999999999999999997764
No 349
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.19 E-value=0.15 Score=52.58 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=39.4
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeecc
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVL 122 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~~ 122 (551)
|..++||||||||++||+||..|++.|++|+|+|+ ...+||.+..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~---------~~~~GG~~~t 52 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDK---------QDHYGGEAAS 52 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCGGGCE
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeC---------CCCCCccccc
Confidence 44568999999999999999999999999999994 6678888743
No 350
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.15 E-value=0.076 Score=54.31 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=31.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45689999999999999999999999999999876
No 351
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.06 E-value=0.096 Score=53.61 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=39.2
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeec
Q 008841 68 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCV 121 (551)
Q Consensus 68 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~ 121 (551)
.|..++||+|||+|++|+++|..|++.|++|+++|+ ....||.|.
T Consensus 2 ~~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~---------~~~~gg~~~ 46 (433)
T 1d5t_A 2 HMDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDR---------NPYYGGESS 46 (433)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTTSC
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEec---------CCCcccccc
Confidence 355679999999999999999999999999999994 566788764
No 352
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=92.95 E-value=0.098 Score=54.66 Aligned_cols=56 Identities=21% Similarity=0.194 Sum_probs=40.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-CCHHHHHHHHHHHHhcCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-FDEDIRDFVAEQMSLRGI 301 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv 301 (551)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+..... -...+...-.+.|++.|+
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl 69 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGI 69 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCC
Confidence 47999999999999999999999999999997654321 111122333445555554
No 353
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.94 E-value=0.068 Score=54.28 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=31.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 354
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=92.61 E-value=0.12 Score=55.21 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
..+|+|||||..|+-+|..|++.|.+|+++++.+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 36899999999999999999999999999998753
No 355
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.57 E-value=0.15 Score=49.69 Aligned_cols=84 Identities=19% Similarity=0.296 Sum_probs=49.2
Q ss_pred hcCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCc
Q 008841 239 LDLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDG 318 (551)
Q Consensus 239 ~~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 318 (551)
.++.....+|.|||+|.+|.-+|..|.+.|.+|+++ +.+. -.+.+++.|+.+... .. .... .
T Consensus 13 ~~~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~------------~~~~i~~~g~~~~~~-~~-~~~~---~ 74 (318)
T 3hwr_A 13 ENLYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQ------------HVQAIEATGLRLETQ-SF-DEQV---K 74 (318)
T ss_dssp -------CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHH------------HHHHHHHHCEEEECS-SC-EEEE---C
T ss_pred hhhhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHh------------HHHHHHhCCeEEEcC-CC-cEEE---e
Confidence 334445679999999999999999999999999998 5321 123455567776532 11 1110 0
Q ss_pred eEEEEECCCeE-EEeeEEEEecCcC
Q 008841 319 SLSVKTNKGTV-DGFSHVMFATGRR 342 (551)
Q Consensus 319 ~~~V~~~~G~~-i~~d~vi~a~G~~ 342 (551)
+.+. .+-+. -.+|.||+|+...
T Consensus 75 -~~~~-~~~~~~~~~D~vilavk~~ 97 (318)
T 3hwr_A 75 -VSAS-SDPSAVQGADLVLFCVKST 97 (318)
T ss_dssp -CEEE-SCGGGGTTCSEEEECCCGG
T ss_pred -eeee-CCHHHcCCCCEEEEEcccc
Confidence 1121 22111 2589999997654
No 356
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=92.53 E-value=0.1 Score=54.52 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=31.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 47999999999999999999999999999997754
No 357
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=92.41 E-value=0.12 Score=54.70 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=32.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 37999999999999999999999999999998754
No 358
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.38 E-value=0.33 Score=40.82 Aligned_cols=51 Identities=12% Similarity=0.098 Sum_probs=39.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcC
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTE 306 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 306 (551)
..++++|+|.|.+|..++..|.+.|.+|+++++.+ +.. +.+++.|+.++.+
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~--------~~~----~~~~~~g~~~i~g 56 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR--------TRV----DELRERGVRAVLG 56 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH--------HHH----HHHHHTTCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH--------HHH----HHHHHcCCCEEEC
Confidence 45789999999999999999999999999999853 222 2344567776654
No 359
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.38 E-value=0.12 Score=52.58 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=32.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
++|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 37999999999999999999999999999987654
No 360
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=92.20 E-value=0.12 Score=54.47 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=31.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHh------------CCCeEEEEeecC
Q 008841 245 PEKIAIVGGGYIALEFAGIFSG------------LTSEVHVFIRQK 278 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~------------~g~~Vtlv~~~~ 278 (551)
..+|+|||||..|+-+|..|++ .|.+|+++++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 3689999999999999999999 899999999865
No 361
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=92.04 E-value=0.13 Score=54.59 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=31.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
..|+|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 46999999999999999999999999999987654
No 362
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.02 E-value=0.13 Score=43.12 Aligned_cols=30 Identities=20% Similarity=0.202 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|+|+|..|...|..|.+.|.+|+++|
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d 36 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVD 36 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 469999999999999999999999999999
No 363
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.90 E-value=0.15 Score=51.84 Aligned_cols=34 Identities=32% Similarity=0.331 Sum_probs=31.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 6999999999999999999999999999997654
No 364
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=91.85 E-value=0.1 Score=51.04 Aligned_cols=63 Identities=19% Similarity=0.176 Sum_probs=44.2
Q ss_pred CeEEEEcCcHHHHHHHHHHH--hCCCeEEEEeecCccCCC-------CC-HHHHHHHHHHHHhcCcEEEcCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFS--GLTSEVHVFIRQKKVLRG-------FD-EDIRDFVAEQMSLRGIEFHTEES 308 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~--~~g~~Vtlv~~~~~~l~~-------~~-~~~~~~l~~~l~~~Gv~i~~~~~ 308 (551)
..|+|||+|+.|+-+|..|+ +.|.+|+++++.+.+-.. ++ ..+...+.+.+++.|+++..+..
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~ 138 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGD 138 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCc
Confidence 36999999999999999996 469999999987654211 11 11223345567778888876644
No 365
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.61 E-value=0.17 Score=48.47 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..+|.|||+|.-|...|..+++.|++|+++|
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 4579999999999999999999999999999
No 366
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.50 E-value=0.18 Score=48.83 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|.|||+|.-|...|..|++.|++|+++|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 469999999999999999999999999999
No 367
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=91.49 E-value=0.16 Score=52.37 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=32.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCC--eEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTS--EVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~--~Vtlv~~~~~~ 280 (551)
++|+|||+|.+|+-+|..|++.|. +|+++++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999987654
No 368
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=91.45 E-value=0.16 Score=50.16 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=31.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3799999999999999999999999999999753
No 369
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=91.44 E-value=0.16 Score=51.72 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=31.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999999999999999986643
No 370
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.37 E-value=0.17 Score=46.38 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
...|+|||||..|...+..|.+.|.+|+||+
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVva 61 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVA 61 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 4679999999999999999999999999998
No 371
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=91.33 E-value=0.16 Score=51.74 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=32.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 57999999999999999999999999999987753
No 372
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=91.33 E-value=0.21 Score=51.86 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=33.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 468999999999999999999999999999987654
No 373
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=91.20 E-value=0.21 Score=49.90 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=32.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec-Cc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ-KK 279 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~-~~ 279 (551)
+.+|+|||+|..|+-+|..|.+.|.+|+++++. +.
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 568999999999999999999999999999988 54
No 374
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=91.18 E-value=0.18 Score=50.63 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=30.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
.|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 699999999999999999999999999998754
No 375
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=91.07 E-value=0.18 Score=50.34 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=30.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
.+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999864
No 376
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.97 E-value=0.17 Score=46.27 Aligned_cols=29 Identities=17% Similarity=0.151 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 74 DLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 74 dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
+|+|||+|..|...|..|.+.|++|+++|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid 30 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIIN 30 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 69999999999999999999999999999
No 377
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=90.90 E-value=0.19 Score=50.27 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=31.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 6999999999999999999999999999998743
No 378
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=90.84 E-value=0.22 Score=50.58 Aligned_cols=60 Identities=20% Similarity=0.250 Sum_probs=44.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCC-CeEEEEeecCccCCC----------CC------HHHHHHHHHHHHhcCcEEE
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLT-SEVHVFIRQKKVLRG----------FD------EDIRDFVAEQMSLRGIEFH 304 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g-~~Vtlv~~~~~~l~~----------~~------~~~~~~l~~~l~~~Gv~i~ 304 (551)
..+|+|||+|..|+-+|..|++.| .+|+++++.+++... ++ ......+.+.+++.|+++.
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHCCCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhCCccc
Confidence 468999999999999999999999 899999987764210 00 0112456677888887654
No 379
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=90.83 E-value=0.2 Score=54.12 Aligned_cols=35 Identities=17% Similarity=0.221 Sum_probs=32.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHh-CCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSG-LTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~-~g~~Vtlv~~~~~~ 280 (551)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 379999999999999999999 99999999988754
No 380
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.83 E-value=0.15 Score=48.44 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
...|+|||||-.|...+..|.+.|.+|+||+
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtVia 43 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVS 43 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEc
Confidence 3579999999999999999999999999999
No 381
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=90.81 E-value=0.19 Score=53.16 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=31.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHh---CCCeEEEEeecC
Q 008841 245 PEKIAIVGGGYIALEFAGIFSG---LTSEVHVFIRQK 278 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~---~g~~Vtlv~~~~ 278 (551)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 999999999864
No 382
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=90.80 E-value=0.15 Score=50.65 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=30.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 699999999999999999999999999998753
No 383
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.79 E-value=0.21 Score=48.73 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=29.1
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
..+|+|||+|..|...|..|+..|+ +|+|+|
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~D 35 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFD 35 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 4689999999999999999999998 999999
No 384
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=90.79 E-value=0.21 Score=49.97 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=30.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
++|+|||+|..|+++|..+++.|.+|.++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999765
No 385
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.76 E-value=0.18 Score=49.21 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=30.4
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
|.+..+|.|||+|..|.+.|..|++.|+ +|+++|
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D 35 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFD 35 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 3445689999999999999999999998 999999
No 386
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=90.74 E-value=0.23 Score=49.21 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=30.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ 277 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~ 277 (551)
.+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 57999999999999999999999999999975
No 387
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=90.72 E-value=0.2 Score=50.08 Aligned_cols=34 Identities=9% Similarity=0.078 Sum_probs=31.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3799999999999999999999999999998653
No 388
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=90.69 E-value=0.2 Score=54.09 Aligned_cols=32 Identities=31% Similarity=0.416 Sum_probs=30.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 103 (551)
++||||||||.||++||+.|++.|.+|+||||
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK 36 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSL 36 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEec
Confidence 58999999999999999999999999999995
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.63 E-value=0.21 Score=44.24 Aligned_cols=30 Identities=20% Similarity=0.104 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhC-CCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANF-GASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE 102 (551)
.+|+|||+|..|...|..|.+. |++|+++|
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid 70 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIE 70 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEE
Confidence 4799999999999999999998 99999999
No 390
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=90.61 E-value=0.2 Score=49.23 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---CCCeEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSG---LTSEVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~---~g~~Vtlv~~~~~ 279 (551)
.+|+|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 369999999999999999999 8999999998753
No 391
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.40 E-value=0.22 Score=48.42 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
-+|.|||+|.-|..-|..++..|++|+|+|
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D 36 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEE
Confidence 469999999999999999999999999999
No 392
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=90.37 E-value=0.22 Score=52.22 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=31.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCC-CeEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLT-SEVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g-~~Vtlv~~~~~ 279 (551)
.+|+|||+|..|+-+|..|.+.| .+|+++++.++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~r 43 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 57999999999999999999999 99999997664
No 393
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=90.32 E-value=0.73 Score=49.27 Aligned_cols=44 Identities=23% Similarity=0.268 Sum_probs=39.4
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCCCCeec
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCV 121 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~~~~~~~~~~GG~~~ 121 (551)
|.++|||+|||+|..|...|..|++.|.+|++||+ +...||.|.
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~---------~~~~gg~~~ 48 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDS---------RSYYGGNWA 48 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCGGGC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcC---------CCcccCccc
Confidence 44479999999999999999999999999999994 778888774
No 394
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.30 E-value=0.22 Score=49.99 Aligned_cols=30 Identities=33% Similarity=0.571 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|||+|.+|+.+|..|...|.+|+++|
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D 220 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATD 220 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEc
Confidence 579999999999999999999999999999
No 395
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.27 E-value=0.14 Score=53.64 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=29.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---CCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSG---LTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~---~g~~Vtlv~~~~ 278 (551)
.+|+|||||..|+-+|..|++ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 579999999999999999999 999999999865
No 396
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.19 E-value=0.17 Score=51.96 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|||.|.+|+++|..|+++|++|+++|
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D 35 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMD 35 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEE
Confidence 479999999999999999999999999999
No 397
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=90.19 E-value=0.3 Score=50.38 Aligned_cols=41 Identities=27% Similarity=0.445 Sum_probs=34.7
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCCCCCCCCCCCCCee
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGA-SVAICELPFSTISSETTGGVGGTC 120 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE~~~~~~~~~~~~~~GG~~ 120 (551)
..+||+|||||++|+++|..|++.|+ +|+|+|+ ...+||.|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~---------~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEA---------TDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECS---------SSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeC---------CCCCCCce
Confidence 35899999999999999999999998 8999993 45577765
No 398
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.18 E-value=0.22 Score=49.72 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=30.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
.+|+|||+|.+|+.+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999864
No 399
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=90.17 E-value=0.25 Score=53.48 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.3
Q ss_pred eEEEEcCcHHHHHHHHHHHh-----CCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSG-----LTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~-----~g~~Vtlv~~~~~~ 280 (551)
.|+|||+|+.|+-+|..|++ .|.+|+++++.+..
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 69999999999999999999 99999999987653
No 400
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=89.91 E-value=0.24 Score=51.84 Aligned_cols=59 Identities=17% Similarity=0.207 Sum_probs=45.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC------------------CCHHHHHHHHHHHHhcCcEEEc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG------------------FDEDIRDFVAEQMSLRGIEFHT 305 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~~~~~l~~~l~~~Gv~i~~ 305 (551)
.+|+|||+|..|+-+|..|++.|.+|+++++.+++... +... ...+.+.+++.|++...
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~ 81 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETYK 81 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCccee
Confidence 57999999999999999999999999999987765211 0111 24566778888887643
No 401
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.91 E-value=0.64 Score=38.89 Aligned_cols=32 Identities=6% Similarity=0.107 Sum_probs=29.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ 277 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~ 277 (551)
++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 58999999999999999999999999999874
No 402
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=89.86 E-value=0.32 Score=48.81 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=32.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.+++|||+|..|+.+|..|.+.|.+|+++++.+.+
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 47999999999999999999999999999987654
No 403
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.85 E-value=0.24 Score=50.99 Aligned_cols=31 Identities=26% Similarity=0.491 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..+|.|||.|.+|+++|..|+++|++|++.|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D 39 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVND 39 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEe
Confidence 3579999999999999999999999999999
No 404
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.82 E-value=0.26 Score=48.78 Aligned_cols=31 Identities=26% Similarity=0.336 Sum_probs=29.3
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
+.+|.|||+|..|...|..|++.|++|++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~ 34 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWD 34 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 4689999999999999999999999999998
No 405
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=89.56 E-value=0.25 Score=49.07 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=31.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.++|+|||+|..|+-+|..|+ .|.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 468999999999999999999 59999999997543
No 406
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=89.49 E-value=0.3 Score=51.10 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=31.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999986
No 407
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.48 E-value=0.25 Score=49.06 Aligned_cols=31 Identities=26% Similarity=0.474 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
+.+|||+|||.||+.+|..|...|. +|+++|
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D 219 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVD 219 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEE
Confidence 4689999999999999999999998 999999
No 408
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=89.46 E-value=0.29 Score=50.50 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=32.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 468999999999999999999999999999998764
No 409
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=89.41 E-value=0.18 Score=51.91 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=32.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCC------CeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLT------SEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g------~~Vtlv~~~~~~ 280 (551)
.+|+|||+|.+|+-+|..|++.| .+|+++++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 58999999999999999999999 999999998654
No 410
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.29 E-value=0.3 Score=47.65 Aligned_cols=30 Identities=23% Similarity=0.433 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
++|.|||+|.-|.+.|..|++.|.+|++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~ 32 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVS 32 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEe
Confidence 579999999999999999999999999999
No 411
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=89.20 E-value=0.36 Score=50.23 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=33.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 468999999999999999999999999999998765
No 412
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=89.09 E-value=0.34 Score=50.86 Aligned_cols=81 Identities=12% Similarity=0.022 Sum_probs=55.1
Q ss_pred cCCCCCCeEEEEcCcHHHHH-HHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCc
Q 008841 240 DLPSKPEKIAIVGGGYIALE-FAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDG 318 (551)
Q Consensus 240 ~~~~~~~~vvViG~G~~g~e-~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 318 (551)
++....+++.+||-|-+|+- +|..|.+.|.+|+..+.... + . ..+.|++.|++++.+.....+.
T Consensus 14 ~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~-----~-~----~~~~L~~~gi~~~~G~~~~~~~----- 78 (524)
T 3hn7_A 14 NLYFQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY-----P-P----MSTQLEQAGVTIEEGYLIAHLQ----- 78 (524)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----T-T----HHHHHHHTTCEEEESCCGGGGC-----
T ss_pred ceeecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC-----c-H----HHHHHHHCCCEEECCCCHHHcC-----
Confidence 34445689999999999997 68899999999999887542 1 1 2456778899998763321110
Q ss_pred eEEEEECCCeEEEeeEEEEecCcCCCCC
Q 008841 319 SLSVKTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 319 ~~~V~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
-.+|.||+..|..+...
T Consensus 79 -----------~~~d~vV~Spgi~~~~p 95 (524)
T 3hn7_A 79 -----------PAPDLVVVGNAMKRGMD 95 (524)
T ss_dssp -----------SCCSEEEECTTCCTTSH
T ss_pred -----------CCCCEEEECCCcCCCCH
Confidence 13688888888876554
No 413
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=89.02 E-value=0.33 Score=49.69 Aligned_cols=59 Identities=20% Similarity=0.213 Sum_probs=44.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCC-----------------CCHHHHHHHHHHHHhcCcEEEc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRG-----------------FDEDIRDFVAEQMSLRGIEFHT 305 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~-----------------~~~~~~~~l~~~l~~~Gv~i~~ 305 (551)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+... +... ...+.+.+++.|++...
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~~g~~~~~ 81 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPD-QTALISLLDELGLKTFE 81 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTT-CHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCc-cHHHHHHHHHcCCcccc
Confidence 47999999999999999999999999999987654211 1111 34566778888887643
No 414
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.93 E-value=0.32 Score=47.27 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
++|.|||+|.-|.+.|..|++.|.+|++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~ 32 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLL 32 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEE
Confidence 579999999999999999999999999998
No 415
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=88.90 E-value=0.33 Score=49.42 Aligned_cols=34 Identities=21% Similarity=0.099 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCC-eEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTS-EVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~-~Vtlv~~~~~ 279 (551)
.+|+|||+|..|+-+|..|++.|. +|+++++.+.
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 479999999999999999999999 9999998764
No 416
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=88.79 E-value=0.28 Score=49.26 Aligned_cols=33 Identities=27% Similarity=0.242 Sum_probs=30.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHh-CC-CeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSG-LT-SEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~-~g-~~Vtlv~~~~ 278 (551)
.+|+|||+|..|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 89 9999999876
No 417
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=88.71 E-value=0.27 Score=51.84 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=32.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 46899999999999999999999999999998754
No 418
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.66 E-value=0.41 Score=49.82 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=54.9
Q ss_pred CCCeEEEEcCcHHHHH-HHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEE
Q 008841 244 KPEKIAIVGGGYIALE-FAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSV 322 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e-~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V 322 (551)
..+++.|||-|-+|+- +|..|.+.|.+|+..+.... + ..+.|++.|++++.+.....+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~------~-----~~~~l~~~gi~~~~g~~~~~~---------- 79 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN------S-----VTQHLTALGAQIYFHHRPENV---------- 79 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC------H-----HHHHHHHTTCEEESSCCGGGG----------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC------H-----HHHHHHHCCCEEECCCCHHHc----------
Confidence 4589999999999996 89999999999998876431 1 234578889999877332111
Q ss_pred EECCCeEEEeeEEEEecCcCCCCC
Q 008841 323 KTNKGTVDGFSHVMFATGRRPNTK 346 (551)
Q Consensus 323 ~~~~G~~i~~d~vi~a~G~~p~~~ 346 (551)
..+|.||++.|..+...
T Consensus 80 -------~~~d~vV~Spgi~~~~p 96 (494)
T 4hv4_A 80 -------LDASVVVVSTAISADNP 96 (494)
T ss_dssp -------TTCSEEEECTTSCTTCH
T ss_pred -------CCCCEEEECCCCCCCCH
Confidence 12688888888877543
No 419
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.65 E-value=0.58 Score=47.87 Aligned_cols=30 Identities=17% Similarity=0.124 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|.|||+|.-|...|..|++.|++|+++|
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 579999999999999999999999999999
No 420
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.64 E-value=0.35 Score=46.73 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
++|.|||+|..|...|..|++.|++|++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLID 33 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEE
Confidence 579999999999999999999999999999
No 421
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.62 E-value=0.28 Score=48.77 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|||+|..|+.+|..|...|.+|+++|
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D 214 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYD 214 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEe
Confidence 579999999999999999999999999999
No 422
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=88.61 E-value=0.25 Score=53.33 Aligned_cols=32 Identities=34% Similarity=0.442 Sum_probs=30.2
Q ss_pred CccEEEECCChHHHHHHHHHH---h-CCCcEEEEcc
Q 008841 72 DFDLFTIGAGSGGVRASRFAA---N-FGASVAICEL 103 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~---~-~G~~V~liE~ 103 (551)
++||||||||+||++||+.|+ + .|.+|+||||
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK 57 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEK 57 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECS
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeC
Confidence 589999999999999999999 6 8999999995
No 423
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=88.58 E-value=0.39 Score=48.35 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=32.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.+++|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 47999999999999999999999999999987654
No 424
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.55 E-value=0.41 Score=46.97 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|.|||+|.-|.+.|..|++.|++|++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 579999999999999999999999999999
No 425
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.52 E-value=0.37 Score=46.83 Aligned_cols=30 Identities=30% Similarity=0.348 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGA--SVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE 102 (551)
++|+|||+|..|...|..|++.|+ +|+++|
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d 39 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLED 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 579999999999999999999998 999999
No 426
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=88.45 E-value=0.35 Score=49.58 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
.+|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4799999999999999999999999999998764
No 427
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=88.38 E-value=0.42 Score=51.89 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 6899999999999999999999999999998643
No 428
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=88.19 E-value=0.41 Score=49.68 Aligned_cols=35 Identities=14% Similarity=0.304 Sum_probs=32.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 58999999999999999999999999999988765
No 429
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=88.16 E-value=0.42 Score=52.07 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=31.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQ 298 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 35899999999999999999999999999998643
No 430
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=88.08 E-value=0.33 Score=47.84 Aligned_cols=32 Identities=19% Similarity=0.354 Sum_probs=29.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhCC------CeEEEEeecC
Q 008841 247 KIAIVGGGYIALEFAGIFSGLT------SEVHVFIRQK 278 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g------~~Vtlv~~~~ 278 (551)
+|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999864
No 431
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.04 E-value=0.37 Score=47.26 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
.+|+|||+|..|.+.|..|++.|+ +|+|+|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D 40 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYD 40 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 589999999999999999999998 999999
No 432
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.89 E-value=0.23 Score=51.19 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.++|+|+|+|-.|...|..|.+.|++|++||
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId 33 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVD 33 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 3679999999999999999999999999999
No 433
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=87.83 E-value=0.46 Score=46.48 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
.+|.|||+|..|...|..|+..|+ +|+|+|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~D 45 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFD 45 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 479999999999999999999998 999999
No 434
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=87.75 E-value=0.39 Score=50.07 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=30.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 5 DLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 69999999999999999999999999999865
No 435
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.73 E-value=0.66 Score=39.49 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=30.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ 277 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~ 277 (551)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 368999999999999999999999999999875
No 436
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.67 E-value=0.44 Score=48.89 Aligned_cols=30 Identities=27% Similarity=0.460 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
++|.|||.|..|+..|..|++.|++|+++|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D 32 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCID 32 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEE
Confidence 579999999999999999999999999999
No 437
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=87.64 E-value=0.36 Score=48.77 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=30.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~ 278 (551)
.+|+|||+|.+|+-+|..|++. |.+|+++++..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4799999999999999999999 99999999864
No 438
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=87.60 E-value=0.86 Score=44.04 Aligned_cols=75 Identities=23% Similarity=0.341 Sum_probs=48.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCccCCCCCHHHHHHHHHHHHhcCcEEEcCcccEEEEEcCCceEEEEEC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKVLRGFDEDIRDFVAEQMSLRGIEFHTEESPQAILKSTDGSLSVKTN 325 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~V~~~ 325 (551)
.++.|||+|.+|.-+|..|. .|.+|+++.|.+. -.+.+++.|+.+..... ... . .+...
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~------------~~~~l~~~G~~~~~~~~-~~~--~-----~~~~~ 61 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQE------------QAAAIQSEGIRLYKGGE-EFR--A-----DCSAD 61 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH------------HHHHHHHHCEEEEETTE-EEE--E-----CCEEE
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHH------------HHHHHHhCCceEecCCC-eec--c-----ccccc
Confidence 47999999999999999999 8999999987531 12345567887763211 111 0 01111
Q ss_pred CCeEEEeeEEEEecCc
Q 008841 326 KGTVDGFSHVMFATGR 341 (551)
Q Consensus 326 ~G~~i~~d~vi~a~G~ 341 (551)
....-.+|.||+|+-.
T Consensus 62 ~~~~~~~D~vilavK~ 77 (307)
T 3ego_A 62 TSINSDFDLLVVTVKQ 77 (307)
T ss_dssp SSCCSCCSEEEECCCG
T ss_pred ccccCCCCEEEEEeCH
Confidence 1111358999998754
No 439
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=87.54 E-value=0.4 Score=47.56 Aligned_cols=31 Identities=19% Similarity=0.484 Sum_probs=29.2
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
+.+|||+|+|.+|..+|..|...|. +|+++|
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~D 223 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVD 223 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 4689999999999999999999998 899999
No 440
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.51 E-value=0.43 Score=46.43 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=30.2
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCC--cEEEEc
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGA--SVAICE 102 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE 102 (551)
|+++.+|+|||+|..|.+.|..|+..+. ++.|+|
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~D 37 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVD 37 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEe
Confidence 4556789999999999999999998776 899999
No 441
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.49 E-value=0.51 Score=45.94 Aligned_cols=31 Identities=23% Similarity=0.174 Sum_probs=29.0
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC--cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA--SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE 102 (551)
..+|+|||+|..|.+.|..|+..+. +|+|+|
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~D 39 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLID 39 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 3689999999999999999999887 899999
No 442
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.45 E-value=0.6 Score=42.33 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=30.5
Q ss_pred cCCCCCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 240 DLPSKPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 240 ~~~~~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
+.+....++.|||.|.+|..+|..|.+.|.+|+++.|.+
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 333345789999999999999999999999999988754
No 443
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=87.43 E-value=0.37 Score=48.63 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=31.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC-CCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL-TSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~-g~~Vtlv~~~~~~ 280 (551)
.+++|||+|..|+-+|..|++. |.+|+++++.+++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4799999999999999999998 9999999987654
No 444
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.41 E-value=0.44 Score=48.05 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..|+|||+|.+|+.++..|...|.+|+++|
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D 202 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFD 202 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 579999999999999999999999999999
No 445
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=87.36 E-value=0.46 Score=47.32 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=31.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
+++|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999987643
No 446
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.32 E-value=0.62 Score=38.62 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=29.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ 277 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~ 277 (551)
.+++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 47999999999999999999999999999874
No 447
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.21 E-value=0.5 Score=45.71 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEc
Q 008841 74 DLFTIGAGSGGVRASRFAANFGA--SVAICE 102 (551)
Q Consensus 74 dVvIIGgG~aGl~aA~~l~~~G~--~V~liE 102 (551)
+|+|||+|..|.+.|..|+..|+ +|+++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D 32 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVD 32 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 69999999999999999999998 999999
No 448
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.20 E-value=0.48 Score=49.02 Aligned_cols=30 Identities=30% Similarity=0.447 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
++|.|||.|..|+..|..|++.|++|+++|
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d 38 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLD 38 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEE
Confidence 679999999999999999999999999999
No 449
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.06 E-value=0.44 Score=45.82 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=29.6
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
|+++.+|.|||.|.-|...|..|++.|++|+++|
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~d 45 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYD 45 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEEC
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEe
Confidence 3345689999999999999999999999999999
No 450
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=87.05 E-value=0.52 Score=46.08 Aligned_cols=30 Identities=23% Similarity=0.334 Sum_probs=27.7
Q ss_pred ccEEEECCChHHHH-HHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVR-ASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~-aA~~l~~~G~~V~liE 102 (551)
.+|.|||.|.+|++ +|..|.++|++|++.|
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEc
Confidence 57999999999997 7888889999999999
No 451
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.02 E-value=0.53 Score=45.60 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
.+|+|||+|..|...|..|+..|+ +|+|+|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~D 33 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLD 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Confidence 579999999999999999999986 999999
No 452
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.90 E-value=0.39 Score=46.67 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=31.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
.++|.|||+|..|..+|..++..|.+|++++..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999987654
No 453
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=86.83 E-value=0.47 Score=50.39 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=30.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999865
No 454
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=86.80 E-value=0.55 Score=37.56 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=29.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCC-CeEEEEeec
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLT-SEVHVFIRQ 277 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g-~~Vtlv~~~ 277 (551)
.++++|+|+|.+|..++..|.+.| .+|+++.|.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 368999999999999999999999 889988875
No 455
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.77 E-value=0.63 Score=45.14 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=29.1
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
..+|.|||+|..|.+.|..|+..|+ +|+|+|
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D 39 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVD 39 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 3579999999999999999999999 999999
No 456
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=86.75 E-value=0.65 Score=50.25 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=33.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
..++|+|||+|..|+.+|..|.+.|.+|+++++.+.+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3579999999999999999999999999999987654
No 457
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.73 E-value=0.39 Score=46.18 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
++|.|||+|.-|.+.|..|++.|.+|++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~ 32 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIG 32 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 579999999999999999999999999999
No 458
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.69 E-value=0.56 Score=45.65 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|.|||+|.-|.+.|..|++.|++|+++|
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d 36 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEe
Confidence 579999999999999999999999999999
No 459
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.58 E-value=0.55 Score=46.53 Aligned_cols=30 Identities=17% Similarity=0.317 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..|+|||||.-|..+++.+++.|++|+++|
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd 31 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVD 31 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 579999999999999999999999999999
No 460
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=86.54 E-value=0.51 Score=50.07 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=32.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
..|+|||+|..|+.+|..+++.|.+|+++++.+.+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 47999999999999999999999999999987654
No 461
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.38 E-value=0.47 Score=44.39 Aligned_cols=30 Identities=23% Similarity=0.470 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
.+|+|||+|..|..+|..|++.|. +++|+|
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD 62 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLD 62 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEc
Confidence 579999999999999999999997 899999
No 462
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=86.35 E-value=0.69 Score=51.39 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=32.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
..++|+|||+|..|+.+|..|.+.|.+|+++++.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 356999999999999999999999999999997764
No 463
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.31 E-value=0.68 Score=44.80 Aligned_cols=32 Identities=19% Similarity=0.114 Sum_probs=30.0
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+.+|.|||.|.-|...|..|++.|++|+++|
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~d 51 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWN 51 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEe
Confidence 34689999999999999999999999999999
No 464
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.28 E-value=0.55 Score=47.05 Aligned_cols=30 Identities=27% Similarity=0.436 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|||+|.+|+.++..|...|.+|+++|
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d 202 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATD 202 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 579999999999999999999999999999
No 465
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=86.23 E-value=0.51 Score=48.65 Aligned_cols=31 Identities=19% Similarity=0.086 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhC-CC-cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANF-GA-SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~-G~-~V~liE 102 (551)
..+|.|||+|.-|+..|..|++. |+ +|+++|
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 35799999999999999999999 99 999999
No 466
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.10 E-value=0.61 Score=45.37 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=27.8
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEE
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAIC 101 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~li 101 (551)
..+|.|||+|.-|.+.|..|++.|++|+++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 457999999999999999999999999998
No 467
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.09 E-value=0.66 Score=45.91 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=29.4
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..+|.|||+|.-|.+.|..|++.|++|++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~ 59 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWS 59 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEe
Confidence 3589999999999999999999999999999
No 468
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.07 E-value=0.49 Score=48.85 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=30.3
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhC--CCcEEEEc
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANF--GASVAICE 102 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE 102 (551)
|.++.+|.|||.|..|+..|..|++. |++|+++|
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d 37 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVD 37 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 44446899999999999999999998 89999999
No 469
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.03 E-value=0.68 Score=41.96 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=28.8
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..+|.|||+|..|.+.|..|++.|.+|++++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~ 49 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYG 49 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3579999999999999999999999999999
No 470
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.92 E-value=0.64 Score=44.27 Aligned_cols=29 Identities=17% Similarity=0.087 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 74 DLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 74 dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
+|.|||+|..|...|..|++.|++|++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 30 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWL 30 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEE
Confidence 59999999999999999999999999999
No 471
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=85.89 E-value=0.67 Score=49.03 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=31.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
-.|+|||+|..|+-+|..|++.|.+|.++++.+
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 479999999999999999999999999999874
No 472
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.87 E-value=0.6 Score=46.34 Aligned_cols=30 Identities=30% Similarity=0.521 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..|+|+|+|.+|+.++..|+..|.+|++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~d 197 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFD 197 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 579999999999999999999999999999
No 473
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=85.86 E-value=0.72 Score=47.48 Aligned_cols=41 Identities=22% Similarity=0.355 Sum_probs=36.0
Q ss_pred CccEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCCCCeec
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFG--ASVAICELPFSTISSETTGGVGGTCV 121 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~~~~~~~~~~GG~~~ 121 (551)
++||+|||||++|+++|++|++.| ++|+|+|+ ...+||.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~---------~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEA---------GERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECS---------SSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEEC---------CCCCCceeE
Confidence 589999999999999999999999 99999993 466777654
No 474
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=85.84 E-value=0.44 Score=48.68 Aligned_cols=31 Identities=23% Similarity=0.205 Sum_probs=29.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCC-CeEEEEee
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLT-SEVHVFIR 276 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g-~~Vtlv~~ 276 (551)
.+|+|||+|..|+.+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 475
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.72 E-value=0.57 Score=47.63 Aligned_cols=31 Identities=26% Similarity=0.142 Sum_probs=29.6
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
+.+|.|||.|..||..|..+++.|++|+.+|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~D 51 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYD 51 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEE
Confidence 4689999999999999999999999999999
No 476
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.38 E-value=0.66 Score=44.54 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=29.2
Q ss_pred CCccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 71 YDFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 71 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+.+|.|||+|..|...|..|.+.|++|++++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 34 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFD 34 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEe
Confidence 34689999999999999999999999999998
No 477
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=85.29 E-value=0.57 Score=49.65 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=31.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
-.|+|||+|..|+.+|..+++.|.+|+++++.+.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS 156 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 37999999999999999999999999999987643
No 478
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.23 E-value=0.76 Score=46.48 Aligned_cols=30 Identities=17% Similarity=0.303 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|||.|..|...|..|.+.|.+|++||
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId 34 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLD 34 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 469999999999999999999999999999
No 479
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=85.20 E-value=0.7 Score=44.66 Aligned_cols=29 Identities=21% Similarity=0.367 Sum_probs=27.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
++|+|||+|.-|.+.|..|+ .|.+|++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~ 31 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVT 31 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEE
Confidence 57999999999999999999 999999998
No 480
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=84.97 E-value=0.61 Score=45.46 Aligned_cols=157 Identities=15% Similarity=0.150 Sum_probs=97.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhC--CCeEEEEeecCccCCC--------------------------------------CCH
Q 008841 247 KIAIVGGGYIALEFAGIFSGL--TSEVHVFIRQKKVLRG--------------------------------------FDE 286 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~--g~~Vtlv~~~~~~l~~--------------------------------------~~~ 286 (551)
+|+|||+|+.|+.+|..|++. |.+|+++++.+..... ...
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~~ 146 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAA 146 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCHH
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcchH
Confidence 799999999999999999998 9999999986543100 112
Q ss_pred HHHHHHHHHHHh-cCcEEEcCcccEEEEEcC----C--ceEEEEEC--------------CCeEEEe-------------
Q 008841 287 DIRDFVAEQMSL-RGIEFHTEESPQAILKST----D--GSLSVKTN--------------KGTVDGF------------- 332 (551)
Q Consensus 287 ~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~----~--~~~~V~~~--------------~G~~i~~------------- 332 (551)
++...+.+.+.+ .|++++.+++|+++..++ + .+..|.+. ++.++.+
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~ 226 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQ 226 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSST
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccc
Confidence 334455666666 499999999999998763 2 33445432 3457999
Q ss_pred --eEEEEecCcCCCCCCCCccccCeeecCCC------CeEeC-------CCCCC--CCCcEEEeCcCCC----CC---CC
Q 008841 333 --SHVMFATGRRPNTKNLGLEKVGVKMTKNG------AIEVD-------EYSGT--AVPSIWAVGDVTD----RI---NL 388 (551)
Q Consensus 333 --d~vi~a~G~~p~~~~l~l~~~gl~~~~~G------~i~vd-------~~~~t--~~~~vya~GD~~~----~~---~~ 388 (551)
+.||.|+|......-. +...-..++..+ ....+ ++.+- -+|++|++|-... .+ +.
T Consensus 227 ~~~~VV~ATG~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~~ 305 (326)
T 2gjc_A 227 KHGVILSTTGHDGPFGAF-CAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPT 305 (326)
T ss_dssp TCCEEEECCCCC--CCSH-HHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCSC
T ss_pred cCCEEEECcCCCchHHHH-HHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCChh
Confidence 9999999987644211 111000011111 11111 12222 5799999998874 22 22
Q ss_pred hHHHHHhHHHHHHHHc
Q 008841 389 TPVALMEGGALAKTLF 404 (551)
Q Consensus 389 ~~~A~~~g~~aa~~i~ 404 (551)
.-.-...|+.+|+.|+
T Consensus 306 fg~m~~sg~~~a~~~~ 321 (326)
T 2gjc_A 306 FGAMALSGVHAAEQIL 321 (326)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHH
Confidence 2233477888888775
No 481
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=84.93 E-value=0.8 Score=47.44 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=32.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCC-CeEEEEeecCcc
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLT-SEVHVFIRQKKV 280 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g-~~Vtlv~~~~~~ 280 (551)
..+++|||+|..|+-+|..|.+.| .+|+++++.+.+
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 458999999999999999999998 799999988654
No 482
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.87 E-value=0.7 Score=38.44 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=29.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeec
Q 008841 245 PEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ 277 (551)
Q Consensus 245 ~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~ 277 (551)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999988874
No 483
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=84.87 E-value=0.67 Score=42.18 Aligned_cols=32 Identities=28% Similarity=0.137 Sum_probs=29.3
Q ss_pred CCccEEEECC-ChHHHHHHHHHHhCCCcEEEEc
Q 008841 71 YDFDLFTIGA-GSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 71 ~~~dVvIIGg-G~aGl~aA~~l~~~G~~V~liE 102 (551)
.+.+|+|+|| |..|...+..|.+.|++|.+++
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~ 35 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVV 35 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEEC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE
Confidence 3467999996 9999999999999999999999
No 484
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=84.86 E-value=0.83 Score=44.49 Aligned_cols=31 Identities=19% Similarity=0.191 Sum_probs=29.0
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
..+|.|||+|..|.+.|..|+..|+ +|+|+|
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~D 38 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFD 38 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 4589999999999999999999988 999999
No 485
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=84.76 E-value=0.65 Score=44.32 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=31.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKK 279 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~ 279 (551)
++|.|||+|.+|..+|..+.+.|.+|+++++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 6899999999999999999999999999987653
No 486
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.70 E-value=0.74 Score=44.90 Aligned_cols=31 Identities=23% Similarity=0.183 Sum_probs=28.5
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC--cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA--SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE 102 (551)
..+|.|||+|..|.+.|..|+..|. +++++|
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D 37 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVID 37 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEe
Confidence 3579999999999999999999887 899999
No 487
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=84.68 E-value=0.8 Score=45.34 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=29.8
Q ss_pred CCCCccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 69 SHYDFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 69 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
|....+|.|||.|.-|...|..|++.|++|+++|
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~d 52 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYD 52 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEe
Confidence 4445789999999999999999999999999999
No 488
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=84.60 E-value=0.8 Score=47.78 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=31.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeecCcc
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQKKV 280 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~~~ 280 (551)
.|+|||+|..|+-+|..+++.|.+|.++++.+.+
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 6999999999999999999999999999987653
No 489
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.56 E-value=0.38 Score=40.64 Aligned_cols=30 Identities=10% Similarity=0.144 Sum_probs=28.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|+|||+|..|...+..|.+.|.+|++++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~ 51 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAG 51 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEc
Confidence 479999999999999999999999999998
No 490
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=84.52 E-value=0.87 Score=43.10 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=31.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhCCCeEEEEeecC
Q 008841 244 KPEKIAIVGGGYIALEFAGIFSGLTSEVHVFIRQK 278 (551)
Q Consensus 244 ~~~~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~~ 278 (551)
.+++|+|||+|.+|...+..|.+.|++|+++....
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 36899999999999999999999999999998643
No 491
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.35 E-value=0.89 Score=46.78 Aligned_cols=30 Identities=27% Similarity=0.231 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.+|.|||+|.-|...|..|++.|++|+++|
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEE
Confidence 479999999999999999999999999999
No 492
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=84.31 E-value=0.84 Score=44.66 Aligned_cols=31 Identities=26% Similarity=0.464 Sum_probs=29.3
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..+|.|||+|.-|...|..|++.|++|++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~ 44 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWA 44 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEe
Confidence 4679999999999999999999999999998
No 493
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.04 E-value=2.2 Score=38.62 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=29.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhCCCeEEEEeec
Q 008841 247 KIAIVGGGYIALEFAGIFSGLTSEVHVFIRQ 277 (551)
Q Consensus 247 ~vvViG~G~~g~e~a~~l~~~g~~Vtlv~~~ 277 (551)
+++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5899999999999999999999999999874
No 494
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=84.04 E-value=0.69 Score=45.17 Aligned_cols=33 Identities=18% Similarity=0.029 Sum_probs=29.0
Q ss_pred CCCccEEEECC-ChHHHHHHHHHHhCCC-------cEEEEc
Q 008841 70 HYDFDLFTIGA-GSGGVRASRFAANFGA-------SVAICE 102 (551)
Q Consensus 70 ~~~~dVvIIGg-G~aGl~aA~~l~~~G~-------~V~liE 102 (551)
.+..+|+|+|| |..|...+..|.+.|+ +|.++|
T Consensus 2 ~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 33467999998 9999999999999886 899999
No 495
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=83.90 E-value=1 Score=43.86 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=28.7
Q ss_pred CccEEEECCChHHHHHHHHHHhCCC-cEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGA-SVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE 102 (551)
..+|.|||+|..|.+.|..|+..|+ ++.|+|
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~D 36 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFD 36 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 3589999999999999999999888 999999
No 496
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=83.84 E-value=0.81 Score=47.00 Aligned_cols=30 Identities=23% Similarity=0.388 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 73 FDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 73 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
..|+|||+|..|...+..|.+.|.+|++++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~ 42 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNA 42 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEc
Confidence 579999999999999999999999999999
No 497
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=83.82 E-value=0.84 Score=46.29 Aligned_cols=30 Identities=17% Similarity=0.210 Sum_probs=28.2
Q ss_pred CccEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 72 DFDLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 72 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
.++|.|||.|..|+..|..|++ |++|+++|
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D 65 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALD 65 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEe
Confidence 4689999999999999999998 99999999
No 498
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.82 E-value=0.95 Score=45.05 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=28.7
Q ss_pred ccEEEECC-ChHHHHHHHHHHhCCC---cEEEEc
Q 008841 73 FDLFTIGA-GSGGVRASRFAANFGA---SVAICE 102 (551)
Q Consensus 73 ~dVvIIGg-G~aGl~aA~~l~~~G~---~V~liE 102 (551)
.+|+|||| |.+|+.|+..+...|. +|+++|
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D 248 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKVGIPDANILKWD 248 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEee
Confidence 58999999 9999999999999998 999999
No 499
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=83.81 E-value=0.78 Score=46.80 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=28.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEc
Q 008841 74 DLFTIGAGSGGVRASRFAANFGASVAICE 102 (551)
Q Consensus 74 dVvIIGgG~aGl~aA~~l~~~G~~V~liE 102 (551)
+|.|||+|..|+..|..|++.|++|+++|
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d 30 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVD 30 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 59999999999999999999999999999
No 500
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=83.75 E-value=0.67 Score=49.28 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=31.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhC------CCeEEEEeecCcc
Q 008841 246 EKIAIVGGGYIALEFAGIFSGL------TSEVHVFIRQKKV 280 (551)
Q Consensus 246 ~~vvViG~G~~g~e~a~~l~~~------g~~Vtlv~~~~~~ 280 (551)
-.|+|||+|+.|+.+|..|++. |.+|+++++.+.+
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 4799999999999999999998 9999999998654
Done!