Query 008842
Match_columns 551
No_of_seqs 344 out of 2514
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:59:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008842.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008842hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 7.2E-87 2.5E-91 719.6 49.9 502 26-542 2-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 6.5E-85 2.2E-89 702.9 49.6 494 30-541 1-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 2.8E-80 9.6E-85 672.4 46.9 490 27-541 7-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 2.5E-75 8.5E-80 627.2 44.6 457 30-541 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.8E-72 6.2E-77 607.5 38.7 448 52-539 11-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 1.5E-68 5E-73 581.3 37.7 447 54-539 35-523 (523)
7 2y3s_A TAML; oxidoreductase; H 100.0 5.6E-67 1.9E-71 569.3 42.9 448 52-540 35-528 (530)
8 1zr6_A Glucooligosaccharide ox 100.0 6.2E-67 2.1E-71 566.8 42.8 464 29-549 7-488 (503)
9 2ipi_A Aclacinomycin oxidoredu 100.0 1.6E-66 5.6E-71 565.4 43.2 446 53-540 32-520 (521)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 2E-64 6.7E-69 542.5 36.4 435 53-539 16-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2.2E-39 7.5E-44 354.0 35.0 198 74-279 61-269 (534)
12 4bby_A Alkyldihydroxyacetoneph 100.0 6.1E-35 2.1E-39 325.5 32.8 200 80-281 204-410 (658)
13 4feh_A Oxidoreductase DPRE1; a 100.0 6.6E-34 2.2E-38 305.3 35.8 196 73-275 35-235 (481)
14 2exr_A Cytokinin dehydrogenase 100.0 4.5E-33 1.5E-37 302.7 38.5 201 74-281 54-264 (524)
15 2vfr_A Xylitol oxidase, aldito 100.0 3.1E-32 1E-36 289.4 26.5 191 74-279 13-207 (422)
16 3pm9_A Putative oxidoreductase 100.0 1.8E-32 6.2E-37 294.0 21.7 203 74-281 44-253 (476)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 1.6E-31 5.4E-36 293.0 20.9 200 80-281 136-340 (584)
18 3js8_A Cholesterol oxidase; ch 100.0 1E-29 3.4E-34 273.0 33.7 184 73-260 21-223 (540)
19 1wvf_A 4-cresol dehydrogenase 100.0 7.4E-30 2.5E-34 277.8 22.6 195 80-281 55-266 (520)
20 2i0k_A Oxidoreductase; MIX alp 100.0 1.5E-29 5.3E-34 276.9 19.6 200 53-262 12-229 (561)
21 1e8g_A Vanillyl-alcohol oxidas 100.0 1.7E-28 5.9E-33 268.9 23.4 198 80-282 69-299 (560)
22 1f0x_A DLDH, D-lactate dehydro 100.0 9.2E-29 3.1E-33 269.4 15.4 198 80-281 44-298 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.2E-25 4E-30 228.6 15.2 161 80-256 53-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 3.1E-24 1E-28 220.3 14.7 163 80-256 29-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 4E-24 1.4E-28 218.6 14.3 160 80-254 47-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 8.3E-23 2.8E-27 209.1 18.0 163 80-256 13-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 1.9E-22 6.7E-27 199.4 11.3 151 81-255 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 8.7E-20 3E-24 175.3 11.5 118 141-264 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.1 1.3E-05 4.5E-10 79.9 10.3 154 81-254 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.3 0.0004 1.4E-08 69.1 7.8 156 81-254 4-177 (288)
31 2w3s_A Xanthine dehydrogenase; 96.9 0.00078 2.7E-08 71.3 5.2 152 84-253 179-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 96.2 0.017 5.9E-07 57.7 9.6 155 81-253 9-190 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.0 0.012 4E-07 58.4 7.3 150 81-252 4-174 (288)
34 3hrd_C Nicotinate dehydrogenas 90.9 0.53 1.8E-05 46.6 7.9 75 82-163 3-82 (296)
35 2i0k_A Oxidoreductase; MIX alp 88.9 0.2 6.9E-06 54.2 3.3 23 513-535 533-555 (561)
36 1rm6_B 4-hydroxybenzoyl-COA re 86.4 1.1 3.6E-05 44.9 6.6 74 81-164 5-84 (324)
37 1wvf_A 4-cresol dehydrogenase 82.0 1.7 5.8E-05 46.4 6.3 30 506-535 481-511 (520)
38 3unc_A Xanthine dehydrogenase/ 64.5 5.9 0.0002 47.1 5.4 79 81-166 232-313 (1332)
39 1e8g_A Vanillyl-alcohol oxidas 59.8 5.9 0.0002 42.7 3.9 24 513-536 523-546 (560)
40 3pm9_A Putative oxidoreductase 50.3 7.3 0.00025 41.0 2.6 29 504-532 442-471 (476)
41 1f0x_A DLDH, D-lactate dehydro 34.9 19 0.00066 38.7 2.9 27 512-539 536-562 (571)
42 2uuu_A Alkyldihydroxyacetoneph 31.2 18 0.00062 39.0 2.0 26 508-533 554-580 (584)
43 3zyv_A AOH1; oxidoreductase, m 27.5 35 0.0012 40.7 3.7 79 84-167 242-321 (1335)
44 1wn2_A Peptidyl-tRNA hydrolase 26.1 1.1E+02 0.0038 25.4 5.6 36 80-115 54-90 (121)
45 1xty_A PTH, peptidyl-tRNA hydr 25.9 1.2E+02 0.0039 25.2 5.7 36 80-115 53-89 (120)
46 1rlk_A Hypothetical protein TA 22.1 1.2E+02 0.0042 24.9 5.1 37 80-116 50-87 (117)
47 2zv3_A PTH, peptidyl-tRNA hydr 21.8 1.2E+02 0.0041 24.9 4.9 36 80-115 48-84 (115)
48 2crl_A Copper chaperone for su 20.9 1.8E+02 0.0061 22.5 5.8 32 140-171 48-79 (98)
49 3p04_A Uncharacterized BCR; SE 20.3 1.1E+02 0.0038 23.9 4.1 35 82-140 6-40 (87)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=7.2e-87 Score=719.62 Aligned_cols=502 Identities=41% Similarity=0.770 Sum_probs=422.1
Q ss_pred CCcccHHhHHhhcCCCCcccCCCCCCCCCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCC
Q 008842 26 TPTLNFISCLNRYNVNNFTLFPNIQNDHSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNES 105 (551)
Q Consensus 26 ~~~~~~~~cl~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~ 105 (551)
+|.++|.+||.....+...+ + +.|+.|+|+.|+..+....+|.||+.....+|.+||+|+|++||+++|++|++++
T Consensus 2 ~~~~~f~~c~~~~~~~~~~~-~---~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~ 77 (518)
T 3vte_A 2 NPRENFLKCFSKHIPNNVAN-P---KLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVG 77 (518)
T ss_dssp CHHHHHHHHHHHHCCC-----C---CCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHT
T ss_pred ChhHHHHHHHHhcCCccCCC-C---ceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcC
Confidence 46778999998754322211 2 3578899999998765678899999888899999999999999999999999999
Q ss_pred CeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCceEEeCCCCEEEEecCCCHHHHHHHHHHcCCcccccCCCCCccccc
Q 008842 106 MELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKISVDLESETAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVG 185 (551)
Q Consensus 106 ~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvg 185 (551)
++++|||||||+.|.+..... ++++|||++||+|++|+++++++||+|++|++|+++|.++|+++.+++|.|++||||
T Consensus 78 ~~v~vrggGh~~~g~~~~~~~--~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvg 155 (518)
T 3vte_A 78 LQIRTRSGGHDAEGMSYISQV--PFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVG 155 (518)
T ss_dssp CEEEEESSCCCTTCTTTCCSS--SEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHH
T ss_pred CcEEEECCCcCCCCCccCCCC--CeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeee
Confidence 999999999999887753212 369999999999999999999999999999999999999887789999999999999
Q ss_pred cccccCCccccccccCccccceeeeEEEecCCcEEEccCCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEc
Q 008842 186 GHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNREAMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSR 265 (551)
Q Consensus 186 G~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~ 265 (551)
|+++|||+|+++++||+++|+|+++|||++||++++.+.+++|||||+||||+|+|||||+++|||+|.|+.++.|.+.+
T Consensus 156 G~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~ 235 (518)
T 3vte_A 156 GHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKK 235 (518)
T ss_dssp HHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEE
T ss_pred eeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEe
Confidence 99999999999999999999999999999999999765568999999999867899999999999999999888888776
Q ss_pred CCCHhHHHHHHHHHHHHCCCCCccceeEEEEecCCCC--c--CCcceEEEEEEEeeCChHHHHHHhhhhCCCCCCCcCCc
Q 008842 266 PGSKQHVAKLVNKWQHVAPNLTDDFYLSCFIGAGLPE--T--KSIGLSATFKGFYLGPKHEALTILNNFFPELRVSEKDG 341 (551)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~--~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~l~~~~~~~ 341 (551)
..+.+++.+++.+||++.+.+|+++.+.+.+....+. . ....+.+.+.++|.|+.+++.+.|.+.+++++....++
T Consensus 236 ~~~~~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~ 315 (518)
T 3vte_A 236 NMEIHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDC 315 (518)
T ss_dssp CCCHHHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGE
T ss_pred cCCHHHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccce
Confidence 6566788999999999999999999888766532110 1 11235678889999999999888988888887666778
Q ss_pred eeecHHHHHHHhcCCCCC-Cc---hhhhccccCCCCcccccccccccCCCCHHHHHHHHHHHhcC--CceEEEEeecCCc
Q 008842 342 KEMSWIESILFFSGLSNG-ST---ISDLKKRYNQDKNYFKAKSDYVRTPISVTGIRTALEILDKE--PKGYVIFDPYGGI 415 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~g-~~---~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~--p~~~~~~~~~gGa 415 (551)
.+++|++.+.++++.+.+ .+ +..+.++......+||.||.++.++++.++++.+++++.+. +.+.+.++++||+
T Consensus 316 ~~~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa 395 (518)
T 3vte_A 316 KEFSWIDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGI 395 (518)
T ss_dssp EEECHHHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGG
T ss_pred eecchhhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCcc
Confidence 999999998887755332 22 33343333333457788999999899999999999988763 3578999999999
Q ss_pred cccCCCCCCCCCCCCCCeEEEEEEEEecCCCCcchhhHHHHHHHHHHhhccCcCCCCCceeccCCCCccC-cc-ccccCC
Q 008842 416 MHKIGSEEIAFPHRNGNLFTIQYIVAWYGEDNDKSNGYIDWIRAFYNAMTPFVSWGPRAAYINYMDIDLG-EM-ELINSS 493 (551)
Q Consensus 416 i~~~~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~Y~Ny~d~~l~-~~-~~~~~~ 493 (551)
|++++.++|||+||++.+|.+++...|.++ +..++.++|++++++.|.|+.+..++|+|+||+|.+++ .+ .+
T Consensus 396 ~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~---- 469 (518)
T 3vte_A 396 MEEISESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHAS---- 469 (518)
T ss_dssp GGTSCTTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTS----
T ss_pred ccCCCCCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCcccccccccc----
Confidence 999999999999999658999999999653 33467899999999999999776678999999999886 32 11
Q ss_pred CCCchhHHHHHHHhhhhhcccHHHHHHHHhhcCCCCcccCCCCCCCCcc
Q 008842 494 FPSKDAVEIARVWGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPPTFS 542 (551)
Q Consensus 494 ~~~~~~~~~~~~~~~~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~~~~ 542 (551)
++.++..+.|+++|||+||+||++||+||||+|||+++|||+|...
T Consensus 470 ---~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 470 ---PNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp ---CCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred ---ccchhhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 2335667889999999999999999999999999999999999754
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=6.5e-85 Score=702.91 Aligned_cols=494 Identities=49% Similarity=0.890 Sum_probs=417.0
Q ss_pred cHHhHHhhcCCCCcccCCCCCCCCCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEE
Q 008842 30 NFISCLNRYNVNNFTLFPNIQNDHSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELR 109 (551)
Q Consensus 30 ~~~~cl~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~ 109 (551)
+|.+||.....+. ...|+.|+|+.|.+.+....+|.||+....+.|.+|++|+|++||+++|++|+++++|++
T Consensus 1 ~~~~cl~~~~~~~-------~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 73 (495)
T 3fw9_A 1 DLLSCLTFNGVRN-------HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIR 73 (495)
T ss_dssp CHHHHHHHTTCCC-------EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEE
T ss_pred ChhHHHhhcCCCC-------CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEE
Confidence 4789998865321 134788889999987656789999998888999999999999999999999999999999
Q ss_pred EEcCCCCCCCCccccCCCCeEEEEEcCCCCceEEeCCCCEEEEecCCCHHHHHHHHHHcCCcccccCCCCCccccccccc
Q 008842 110 VRCGGHSYEGTSSFSSDGASFVILDMSNLNKISVDLESETAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHIG 189 (551)
Q Consensus 110 vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~ 189 (551)
|||||||+.|.++..+++ +++|||++|++|++|+++++++||+|+++++|+++|.++++++.+++|.|+++||||+++
T Consensus 74 vrGgGh~~~g~~~~~~~g--gvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~ 151 (495)
T 3fw9_A 74 LRSGGHSYEGLSYTSDTP--FILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHIS 151 (495)
T ss_dssp EESSCCCTTCTTSCCSSC--EEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHH
T ss_pred EECCCcCCCCccccCCCC--eEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeecc
Confidence 999999999888764333 699999999999999999999999999999999999999666889999999999999999
Q ss_pred cCCccccccccCccccceeeeEEEecCCcEEEccCCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCH
Q 008842 190 GGGFGLLSRKYGLAADNVVDALLMDANGRLLNREAMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSK 269 (551)
Q Consensus 190 ~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~ 269 (551)
|||+|+.+++||+++|+|++++||++||++++...+++|||||+|||++|+|||||+++|||+|.|+....+.+.++.+.
T Consensus 152 gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~ 231 (495)
T 3fw9_A 152 GGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAI 231 (495)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECH
T ss_pred CCCCcccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcH
Confidence 99999999999999999999999999999998445689999999996689999999999999999998888877765455
Q ss_pred hHHHHHHHHHHHHCCCCCccceeEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCCCCCCcCCceeecHHHH
Q 008842 270 QHVAKLVNKWQHVAPNLTDDFYLSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPELRVSEKDGKEMSWIES 349 (551)
Q Consensus 270 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ 349 (551)
+++.+++.+||++.+.+|+++.+.+.... ..+...+.+.++|.|+.+++.+.|.+.+++++.....+.+++|++.
T Consensus 232 ~~a~~~l~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~ 306 (495)
T 3fw9_A 232 DEATSLLHKWQFVAEELEEDFTLSVLGGA-----DEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGES 306 (495)
T ss_dssp HHHHHHHHHHHHHHHHSCTTEEEEEEEEE-----ETTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHH
T ss_pred HHHHHHHHHHHHHHhcCChhHeEEEEEcC-----CCCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHH
Confidence 78889999999999899999987665321 1234567788999999999988888888888766678999999999
Q ss_pred HHHhcCCCCCCchhhhccccCC-CCcccccccccccCCCCHHHHHHHHHHHhcCCceEEEEeecCCccccCCCCCCCCCC
Q 008842 350 ILFFSGLSNGSTISDLKKRYNQ-DKNYFKAKSDYVRTPISVTGIRTALEILDKEPKGYVIFDPYGGIMHKIGSEEIAFPH 428 (551)
Q Consensus 350 ~~~~~~~~~g~~~~~~~~~~~~-~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~p~~~~~~~~~gGai~~~~~~~tafph 428 (551)
+.++++.+ ....+.++... ...+||.||.++.++++.++++.+++++.+.+.+.+.++++||++++++.++|||+|
T Consensus 307 ~~~~~~~~---~~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~h 383 (495)
T 3fw9_A 307 FAYLAGLE---TVSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPH 383 (495)
T ss_dssp HHHHTTCS---CGGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCC
T ss_pred HHHHhccc---chhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccc
Confidence 88776542 12223222221 235788999999999999999999999987777889999999999999999999999
Q ss_pred CCCCeEEEEEEEEecCCCCcchhhHHHHHHHHHHhhccCcCCCCCceeccCCCCccCccccccCCCCCchhHHHHHHHhh
Q 008842 429 RNGNLFTIQYIVAWYGEDNDKSNGYIDWIRAFYNAMTPFVSWGPRAAYINYMDIDLGEMELINSSFPSKDAVEIARVWGE 508 (551)
Q Consensus 429 R~~~~~~i~~~~~w~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 508 (551)
|++.+|.+++...|.++.++..++.++|++++++.|.++.+..++++|+||+|.+++.+.+.+. ....+.++..+.|++
T Consensus 384 R~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~-~~~~~~~~~~~~w~~ 462 (495)
T 3fw9_A 384 RSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNK-TVVNNAIEISRSWGE 462 (495)
T ss_dssp CTTCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCH-HHHHTHHHHHHHHHH
T ss_pred cCccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccc-cccccccchhhhhHH
Confidence 9966899999999975323344678899999999999998766789999999998863221000 000234566788999
Q ss_pred hhhcccHHHHHHHHhhcCCCCcccCCCCCCCCc
Q 008842 509 KYFLKNYDRLVKAKTIIDPNNIFSNQQGIPPTF 541 (551)
Q Consensus 509 ~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~~~ 541 (551)
+|||+||+||++||+||||+|||+++|||||..
T Consensus 463 ~Yyg~n~~RL~~vK~~yDP~n~F~~~qsI~p~~ 495 (495)
T 3fw9_A 463 SYFLSNYERLIRAKTLIDPNNVFNHPQSIPPMA 495 (495)
T ss_dssp HHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred HHhHhHHHHHHHHHHhhCcHhhCCCCCCCCCCC
Confidence 999999999999999999999999999999863
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2.8e-80 Score=672.45 Aligned_cols=490 Identities=41% Similarity=0.746 Sum_probs=403.6
Q ss_pred CcccHHhHHhhcCCCCcccCCCCCCCCCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCC
Q 008842 27 PTLNFISCLNRYNVNNFTLFPNIQNDHSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESM 106 (551)
Q Consensus 27 ~~~~~~~cl~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~ 106 (551)
..+++.+||.... |. +.|+.|+|+.|...+....+|.||+.....+|.+||+|+|++||+++|++|+++++
T Consensus 7 ~~~~f~~~L~~~~-------~~--~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~ 77 (500)
T 3tsh_A 7 AKEDFLGCLVKEI-------PP--RLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSV 77 (500)
T ss_dssp --CHHHHHHHHHS-------CG--GGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHhhC-------CC--CEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCC
Confidence 3578999998743 22 12456779999988777889999998888999999999999999999999999999
Q ss_pred eEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCceEEeCCCCEEEEecCCCHHHHHHHHHHcCCcccccCCCCCcccccc
Q 008842 107 ELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKISVDLESETAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGG 186 (551)
Q Consensus 107 ~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG 186 (551)
+|+|||||||+.|.+.+.....++++|||++||+|++|+++++++||+|++|+||+++|.++|+.+.+++|.|++|||||
T Consensus 78 ~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG 157 (500)
T 3tsh_A 78 RIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGG 157 (500)
T ss_dssp EEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHH
T ss_pred cEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecC
Confidence 99999999999987754211112699999999999999999999999999999999999999988899999999999999
Q ss_pred ccccCCccccccccCccccceeeeEEEecCCcEEEccCCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcC
Q 008842 187 HIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNREAMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRP 266 (551)
Q Consensus 187 ~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~ 266 (551)
+++|||+|+++++||+++|+|+++|||++||++++++++++|||||+||||+|+|||||+++||++|.|+.+..+.+.+.
T Consensus 158 ~~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~ 237 (500)
T 3tsh_A 158 NFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKT 237 (500)
T ss_dssp HHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEE
T ss_pred ccccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecC
Confidence 99999999999999999999999999999999998777899999999988788999999999999999998877766654
Q ss_pred CCHhHHHHHHHHHHHHCCCCCccceeEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCCCCCCcCCceeecH
Q 008842 267 GSKQHVAKLVNKWQHVAPNLTDDFYLSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPELRVSEKDGKEMSW 346 (551)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 346 (551)
..+.+.+++.+|+.+.+.+|+++...+.... ....+.++|.|+.++....+.+.+++++.....+.++.|
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 307 (500)
T 3tsh_A 238 -VSEGAVDIINKWQVVAPQLPADLMIRIIAQG---------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSW 307 (500)
T ss_dssp -TTTTHHHHHHHHHHHGGGSCTTEEEEEEESS---------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECH
T ss_pred -cHHHHHHHHHHHHHhhhccChhhEEEEEecC---------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhh
Confidence 3356778899999999999999876654321 235577889999988888887888887766677888999
Q ss_pred HHHHHHhcCCCCCCchhhhccccCCCCcccccccccccCCCCHHHHHHHHHHHhcCC-ceEEEEeecCCccccCCCCCCC
Q 008842 347 IESILFFSGLSNGSTISDLKKRYNQDKNYFKAKSDYVRTPISVTGIRTALEILDKEP-KGYVIFDPYGGIMHKIGSEEIA 425 (551)
Q Consensus 347 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~p-~~~~~~~~~gGai~~~~~~~ta 425 (551)
.+................+..+......+.+.++.++..+++.+.++.+++.+...+ ...++++++||++.+++.++++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata 387 (500)
T 3tsh_A 308 IQSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATP 387 (500)
T ss_dssp HHHHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSS
T ss_pred hccchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCc
Confidence 887655432211111122222222223344556677777888888888887766555 4577889999999999999999
Q ss_pred CCCCCCCeEEEEEEEEecCCCCcchhhHHHHHHHHHHhhccCcCCCCCceeccCCCCccCccccccCCCCCchhHHHHHH
Q 008842 426 FPHRNGNLFTIQYIVAWYGEDNDKSNGYIDWIRAFYNAMTPFVSWGPRAAYINYMDIDLGEMELINSSFPSKDAVEIARV 505 (551)
Q Consensus 426 fphR~~~~~~i~~~~~w~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~~~~~~~~~ 505 (551)
|+||++.+|.+++...|.++.++ ++..+|++++++.|.++....++++|+||+|.+++.++..+ ....+...+.
T Consensus 388 ~~~R~~~l~~i~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~----~~~~~~~~~~ 461 (500)
T 3tsh_A 388 FPHRKGVLFNIQYVNYWFAPGAA--AAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVN----DVSTYASGKV 461 (500)
T ss_dssp CCCCTTCCEEEEEEEEECSTTCC--HHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEET----TEECHHHHHH
T ss_pred CcccCCcEEEEEEEEecCCcchh--HHHHHHHHHHHHHHHHHhcCCCCeEEecccccccccccccc----ccccccccch
Confidence 99999888999999999865443 56789999999999999877778999999999987654332 1233556789
Q ss_pred HhhhhhcccHHHHHHHHhhcCCCCcccCCCCCCCCc
Q 008842 506 WGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPPTF 541 (551)
Q Consensus 506 ~~~~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~~~ 541 (551)
|+++|||+||+||++||+||||+|||+++|||||..
T Consensus 462 w~~~Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 462 WGQKYFKGNFERLAITKGKVDPTDYFRNEQSIPPLI 497 (500)
T ss_dssp HHHHHHGGGHHHHHHHHHHHCTTCCSCCTTSCCCCC
T ss_pred HHHHhhhHHHHHHHHHHHHhCcccccCCCCCCCCCC
Confidence 999999999999999999999999999999999974
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.5e-75 Score=627.17 Aligned_cols=457 Identities=24% Similarity=0.413 Sum_probs=374.6
Q ss_pred cHHhHHhhcCCCCcccCCCCCCCCCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEE
Q 008842 30 NFISCLNRYNVNNFTLFPNIQNDHSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELR 109 (551)
Q Consensus 30 ~~~~cl~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~ 109 (551)
++.+||...+.. |+.|+|+.|.... +.||.|+. ..|.+|++|+|++||+++|++|+++++|+.
T Consensus 2 ~l~~cl~~~~~~-----------v~~p~~~~y~~~~--~~~n~~~~----~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~ 64 (473)
T 3rja_A 2 AIEACLSAAGVP-----------IDIPGTADYERDV--EPFNIRLP----YIPTAIAQTQTTAHIQSAVQCAKKLNLKVS 64 (473)
T ss_dssp HHHHHHHHTTCC-----------BCCTTSHHHHHHT--CCSBTTSC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEE
T ss_pred hHHHHHHhCCCc-----------EECCCCCchHHHH--HHhhcccC----CCCCEEEEeCCHHHHHHHHHHHHHcCCeEE
Confidence 478899987542 2445599998764 67787765 699999999999999999999999999999
Q ss_pred EEcCCCCCCCCccccCCCCeEEEEEcCCCCceE-EeCCCCEEEEecCCCHHHHHHHHHHcCCcccccCCCCCcccccccc
Q 008842 110 VRCGGHSYEGTSSFSSDGASFVILDMSNLNKIS-VDLESETAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHI 188 (551)
Q Consensus 110 vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~ 188 (551)
+||||||+.|.+....++ +++|||++|++|. +|+++.+++||+|++|++|+++|.++| .+.+++|.|+++||||++
T Consensus 65 v~ggGh~~~g~~~~~~~~--~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~ 141 (473)
T 3rja_A 65 AKSGGHSYASFGFGGENG--HLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHF 141 (473)
T ss_dssp EESSCCCTTCGGGTSSSS--CEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHH
T ss_pred EEcCCCCCCCCcccCCCC--eEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeec
Confidence 999999998766543344 4999999999996 999999999999999999999999987 367889999999999999
Q ss_pred ccCCccccccccCccccceeeeEEEecCCcEEEcc-CCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCC
Q 008842 189 GGGGFGLLSRKYGLAADNVVDALLMDANGRLLNRE-AMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPG 267 (551)
Q Consensus 189 ~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~-~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~ 267 (551)
+|||+|+.+++||+++|+|+++|||++||++++++ .+++|||||+||+ +|+|||||+++|||+|.|+....+.+.+..
T Consensus 142 ~ggg~G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~ 220 (473)
T 3rja_A 142 AHGGFGFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGA-GSNFGIVAVWKLATFPAPKVLTRFGVTLNW 220 (473)
T ss_dssp HTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHH-GGGTCEEEEEEEECEECCSCEEEEEEECCC
T ss_pred cCCCCCcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCC-CCceEEEEEEEEEEEeCCCceEEEEEEecC
Confidence 99999999999999999999999999999999987 5789999999999 799999999999999999888888777765
Q ss_pred C-HhHHHHHHHHHHHHCC-CCCccceeEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCCCC-CCcCCce-e
Q 008842 268 S-KQHVAKLVNKWQHVAP-NLTDDFYLSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPELR-VSEKDGK-E 343 (551)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~l~-~~~~~~~-~ 343 (551)
+ .+++.+++.+||++.. ++|+++.+.+.+. . . . .+.+.++|.|+.+++.+++++++...+ .....+. +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~-~---~--~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~ 292 (473)
T 3rja_A 221 KNKTSALKGIEAVEDYARWVAPREVNFRIGDY-G---A--G--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTS 292 (473)
T ss_dssp CSHHHHHHHHHHHHHHHHHTCCTTEEEEEEES-S---S--S--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEE
T ss_pred ccHHHHHHHHHHHHHHhhhCCChhHEEEEEEc-C---C--C--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecc
Confidence 5 6678899999999987 8999998777654 1 1 1 156778999999999988887665544 3446778 9
Q ss_pred ecHHHHHHHhcCCCCCCchhhhccccCCCCcccccccccccCCCCHHHHHHHHHHHhcC-C-----ceEEEEeecCC---
Q 008842 344 MSWIESILFFSGLSNGSTISDLKKRYNQDKNYFKAKSDYVRTPISVTGIRTALEILDKE-P-----KGYVIFDPYGG--- 414 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~-p-----~~~~~~~~~gG--- 414 (551)
++|++.+..+... ....... ......|+.|+.+. .+++.++++.+++++.+. + .+++++++|||
T Consensus 293 ~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ 365 (473)
T 3rja_A 293 LNWIESVLSYSNF---DHVDFIT---PQPVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNS 365 (473)
T ss_dssp ECHHHHHHHTSSS---SCCCCSS---CCCCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTC
T ss_pred cCHHHHHHhhhcC---CCccccc---CCCCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcch
Confidence 9999988766532 1111100 00134567788775 468999999999888542 1 23678999998
Q ss_pred ccccCCCCCCCCCCCCCCeEEEEEEEEecCCCCcchhhHHHHHHHHHHhhccCcCCCCCceeccCCCCccCccccccCCC
Q 008842 415 IMHKIGSEEIAFPHRNGNLFTIQYIVAWYGEDNDKSNGYIDWIRAFYNAMTPFVSWGPRAAYINYMDIDLGEMELINSSF 494 (551)
Q Consensus 415 ai~~~~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~ 494 (551)
++.+++.++|||+||+. +|.++++..|.+. +...++..+|++++++.+.+..+..++++|+||+|.+++.
T Consensus 366 ai~~v~~~~TAf~hR~~-~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~-------- 435 (473)
T 3rja_A 366 QVTKVTNAETAYPHRDK-LWLIQFYDRYDNN-QTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMDR-------- 435 (473)
T ss_dssp GGGGSCTTTSSCCCTTC-SEEEEEEEEECTT-SCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSCH--------
T ss_pred hhcCCCCCCCccccCCc-cEEEEEEEEeCCC-CccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCccccc--------
Confidence 67888899999999995 7889999999531 1122456788988888886655444568999999988742
Q ss_pred CCchhHHHHHHHhhhhhcccHHHHHHHHhhcCCCCcccCCCCCCCCc
Q 008842 495 PSKDAVEIARVWGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPPTF 541 (551)
Q Consensus 495 ~~~~~~~~~~~~~~~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~~~ 541 (551)
..|+++|||+||+||++||+||||+|+|+++|||+|..
T Consensus 436 ---------~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 436 ---------DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp ---------HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred ---------hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 45889999999999999999999999999999999863
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.8e-72 Score=607.46 Aligned_cols=448 Identities=24% Similarity=0.394 Sum_probs=351.4
Q ss_pred CCCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEE
Q 008842 52 DHSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFV 131 (551)
Q Consensus 52 ~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~v 131 (551)
.++.|+|+.|++.+ +.+|.||. ..|.+||+|+|++||+++|++|++++++++|||||||+.+.+... ++ ++
T Consensus 11 ~~~~p~~~~y~~~~--~~~n~~~~----~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~-~~--gv 81 (501)
T 3pop_A 11 FTVGREDPRYIELS--HSDNHRFV----VEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTP-RR--DL 81 (501)
T ss_dssp EEEETTSTTHHHHT--CCSCTTSC----CCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSS-CC--SE
T ss_pred ceECCCCcchHHHH--HHHhhccC----CCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccC-CC--EE
Confidence 35677799999875 67888885 699999999999999999999999999999999999998877643 33 49
Q ss_pred EEEcCCCCceEEeCCCCEEEEecCCCHHHHHHHHH-HcCCcccccCCCCCccccccccccCCccccccccCccccceeee
Q 008842 132 ILDMSNLNKISVDLESETAWVQGGATLGETYSAIS-EASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDA 210 (551)
Q Consensus 132 vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~ 210 (551)
+|||++||+|++|+++++++||+|++|++|+++|. ++| +.+++|.|++|||||+++|||+|+++++||+++|+|+++
T Consensus 82 vIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~ 159 (501)
T 3pop_A 82 VLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAV 159 (501)
T ss_dssp EEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEE
T ss_pred EEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEE
Confidence 99999999999999999999999999999999996 467 778999999999999999999999999999999999999
Q ss_pred EEEe--cCCc--EEEc---c-CCCchhHHHhhcCCCCcceeeEEEEEee----------eec-CceEEEEEEEcCC---C
Q 008842 211 LLMD--ANGR--LLNR---E-AMGEDVFWAIRGGGGGVWGIVYAWKIKL----------LQV-PRVVSGFVLSRPG---S 268 (551)
Q Consensus 211 ~vV~--~~G~--i~~~---~-~~~~dLf~a~rG~g~g~fGiVt~~~~~l----------~p~-p~~~~~~~~~~~~---~ 268 (551)
|||+ +||+ ++++ + .+++|||||+||||+|+|||||+++||+ +|. |..+..+.+.++. +
T Consensus 160 evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~~ 239 (501)
T 3pop_A 160 EVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMID 239 (501)
T ss_dssp EEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGCC
T ss_pred EEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhcC
Confidence 9999 8999 5665 2 4679999999998679999999999999 664 4456665555542 3
Q ss_pred HhHHHHHHHHHHHHCC--CCCccc----eeEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCC----CC-CC
Q 008842 269 KQHVAKLVNKWQHVAP--NLTDDF----YLSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPE----LR-VS 337 (551)
Q Consensus 269 ~~~~~~~~~~~~~~~~--~~p~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~----l~-~~ 337 (551)
.+.+.+++..|+++.. ..|++. ...+.+.. ...+ .+.+...|.|+.+++.+++++++.. ++ .+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p 313 (501)
T 3pop_A 240 ETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNH----VSSG--VLQLMVQQDADVDPEGEILARFVASLTEGTGVVG 313 (501)
T ss_dssp HHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEEC----GGGC--EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHHHHHHhhccCCCccccceEEEEEecC----CCCC--eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCc
Confidence 4456778888877643 345442 22222221 1111 3455667788877766666665542 12 11
Q ss_pred cCCceeecHHHHHHHhcCCCCCCchhhhccccCCCCcccccccccccCCCCHHHHHHHHHHHhcC---CceEEEEeecCC
Q 008842 338 EKDGKEMSWIESILFFSGLSNGSTISDLKKRYNQDKNYFKAKSDYVRTPISVTGIRTALEILDKE---PKGYVIFDPYGG 414 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~---p~~~~~~~~~gG 414 (551)
..++.+++|++........ .+.+. ...+++.|+.++.++++.+.++.+++++... +.+.++++++||
T Consensus 314 ~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GG 383 (501)
T 3pop_A 314 IPRGGVMSWLTGTRYMSQA-DCGDV---------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGG 383 (501)
T ss_dssp EEEEEEEEHHHHHHHTCBC-SCGGG---------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCG
T ss_pred cceeEEeCHHHHHhhhcCC-CCCcc---------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCc
Confidence 2237889999887653211 11100 0234677888988889999999999988653 356788999999
Q ss_pred ccccCCCCCCCCCCCCCCeEEEEEEEEecCCCCcchhhHHHHHHHHHHhhccCc------CCCCCceeccCCCCccCccc
Q 008842 415 IMHKIGSEEIAFPHRNGNLFTIQYIVAWYGEDNDKSNGYIDWIRAFYNAMTPFV------SWGPRAAYINYMDIDLGEME 488 (551)
Q Consensus 415 ai~~~~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~g~Y~Ny~d~~l~~~~ 488 (551)
++++++.++|||+||+. +|.+++...|.++ +..++.++|++++++.|.++. +...+++|+||+|.+++.++
T Consensus 384 av~~v~~~~TAf~hR~~-~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~ 460 (501)
T 3pop_A 384 EINRRGPSDAAVPQRDS-VVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPA 460 (501)
T ss_dssp GGGGSCTTTSSCCCCSC-SEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTT
T ss_pred ccccCCCCCCCccCcCc-cEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccccc
Confidence 99999999999999995 7899999999753 334668899999999997653 22257899999999886544
Q ss_pred cccCCCCCchhHHHHHHHhhhhhcccHHHHHHHHhhcCCCCcccCCCCCCC
Q 008842 489 LINSSFPSKDAVEIARVWGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPP 539 (551)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~ 539 (551)
|..+ ...|+++|||+||+||++||+||||+|||+++|||+|
T Consensus 461 ~~~~----------~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 461 RNRS----------GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp TCCS----------SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccc----------cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 3211 2358999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1.5e-68 Score=581.31 Aligned_cols=447 Identities=26% Similarity=0.392 Sum_probs=337.2
Q ss_pred CCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEE
Q 008842 54 SEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVIL 133 (551)
Q Consensus 54 ~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvI 133 (551)
+.|.|+.|...+ .+.||.||. ..|.+||+|+|++||+++|++|+++++||.|||||||+.+.+... ++ +++|
T Consensus 35 ~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~-~~--gvvI 106 (523)
T 2wdx_A 35 VTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNP-DV--KVII 106 (523)
T ss_dssp ECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSST-TC--CEEE
T ss_pred ECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCC-CC--eEEE
Confidence 445599999764 477899986 589999999999999999999999999999999999998876542 23 4999
Q ss_pred EcCCCCceEEeCCCCEEEEecCCCHHHHHHHHH-HcCCcccccCCCCCccccccccccCCccccccccCccccceeeeEE
Q 008842 134 DMSNLNKISVDLESETAWVQGGATLGETYSAIS-EASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALL 212 (551)
Q Consensus 134 dl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~v 212 (551)
||++||+|++|+++.+|+||+|++|.+|+++|. ++| +.+++|.|++|||||+++|||+|+++++||+++|+|+++||
T Consensus 107 dl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ev 184 (523)
T 2wdx_A 107 DMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEV 184 (523)
T ss_dssp ECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEE
T ss_pred EcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEE
Confidence 999999999999999999999999999999998 478 67888999999999999999999999999999999999999
Q ss_pred EecC--CcEEEc--cC--CCch--hHHHhhcCCCCcceeeEEEEEee-----------eecCc-eEEEEEEEcCC---CH
Q 008842 213 MDAN--GRLLNR--EA--MGED--VFWAIRGGGGGVWGIVYAWKIKL-----------LQVPR-VVSGFVLSRPG---SK 269 (551)
Q Consensus 213 V~~~--G~i~~~--~~--~~~d--Lf~a~rG~g~g~fGiVt~~~~~l-----------~p~p~-~~~~~~~~~~~---~~ 269 (551)
|++| |+++++ +. +++| ||||+||||+|+|||||+++||+ +|.|+ .+..+.+.++. +.
T Consensus 185 V~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 264 (523)
T 2wdx_A 185 VVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTE 264 (523)
T ss_dssp EEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCGGGCCH
T ss_pred EEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEecccccCH
Confidence 9955 997543 42 4555 99999987679999999999999 99875 45566666652 23
Q ss_pred hHHHHHHHHHHHHCCC--CCccce--eEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCC----CC-CCcCC
Q 008842 270 QHVAKLVNKWQHVAPN--LTDDFY--LSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPE----LR-VSEKD 340 (551)
Q Consensus 270 ~~~~~~~~~~~~~~~~--~p~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~----l~-~~~~~ 340 (551)
+.+.++++.|++|... .|++.. +..++...........+.+.+.++|.|+.+++.+++++++.. ++ .....
T Consensus 265 ~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~ 344 (523)
T 2wdx_A 265 AAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAHIEAVIDGVPPAEVPE 344 (523)
T ss_dssp HHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHHHHHHHHTTCTTCBCCC
T ss_pred HHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 5567788888776432 455522 222111110001111234556677888877776666664432 22 22234
Q ss_pred ceeecHHHHHHHhcCCCCCCchhhhccccCCCCcccccccccccCCCCHHHHHHHHHHHhcC---CceEEEEeecCCccc
Q 008842 341 GKEMSWIESILFFSGLSNGSTISDLKKRYNQDKNYFKAKSDYVRTPISVTGIRTALEILDKE---PKGYVIFDPYGGIMH 417 (551)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~---p~~~~~~~~~gGai~ 417 (551)
+..++|.+....+. .....++.++.++...++.+.+..+++.+... +...+.++.+||+++
T Consensus 345 ~~~~~~~~~~~~~~----------------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v~ 408 (523)
T 2wdx_A 345 PIEQRWLASTPGRG----------------GRGPASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVN 408 (523)
T ss_dssp CEEEETTSSCCCCC----------------SSCCEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGGG
T ss_pred ceeccHHHHHHhhc----------------CCCCceeeecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCccc
Confidence 55666643210000 00113445677766668889999999888653 345678899999999
Q ss_pred cCCCCCCCCCCCCCCeEEEEEEEEecCCCCcchhhHHHHHHHHHHhhccCc------CCCCCceeccCCCCccCcccccc
Q 008842 418 KIGSEEIAFPHRNGNLFTIQYIVAWYGEDNDKSNGYIDWIRAFYNAMTPFV------SWGPRAAYINYMDIDLGEMELIN 491 (551)
Q Consensus 418 ~~~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~g~Y~Ny~d~~l~~~~~~~ 491 (551)
+++.++++|+||+. +|.+++...|.++.+ .++..+|++++++.+.... +....|+|+||+|.++..++|..
T Consensus 409 ~~~~~~ta~~~R~~-~~~~~~~~~w~~~~~--~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~~~~ 485 (523)
T 2wdx_A 409 TVDPAATALPQRDA-ILKVNYITGWANPGN--EAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLADPGLNT 485 (523)
T ss_dssp GSCTTTSSCCCCSC-SEEEEEEEEESSGGG--HHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGCTTTCC
T ss_pred cCCCccccccccCc-eEEEEEEEEcCCCcc--HHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCccccccccccc
Confidence 99999999999995 788888999976432 3667899999999887321 11135799999998764333321
Q ss_pred CCCCCchhHHHHHHHhhhhhcccHHHHHHHHhhcCCCCcccCCCCCCC
Q 008842 492 SSFPSKDAVEIARVWGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPP 539 (551)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~ 539 (551)
++ ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 486 s~----------~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 486 SG----------VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp SS----------CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ch----------hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 10 138899999999999999999999999999999987
No 7
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=5.6e-67 Score=569.27 Aligned_cols=448 Identities=27% Similarity=0.436 Sum_probs=340.6
Q ss_pred CCCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEE
Q 008842 52 DHSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFV 131 (551)
Q Consensus 52 ~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~v 131 (551)
.|+.|.|+.|+.++ +.||.||. ..|.+|++|+|++||+++|++|++++++|+|||||||+.+.+... ++ ++
T Consensus 35 ~v~~p~~~~Y~~~~--~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~-~~--gv 105 (530)
T 2y3s_A 35 DSVAPGDIRYEDLR--RGENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANS-DV--RV 105 (530)
T ss_dssp CEECTTSTTHHHHT--CCSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCT-TC--CE
T ss_pred eEECCCCccHHHHH--hHhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccC-CC--eE
Confidence 46778899999875 67888885 589999999999999999999999999999999999998866542 23 49
Q ss_pred EEEcCCCCceEEeCCCCEEEEecCCCHHHHHHHHHH-cCCcccccCCCCCccccccccccCCccccccccCccccceeee
Q 008842 132 ILDMSNLNKISVDLESETAWVQGGATLGETYSAISE-ASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDA 210 (551)
Q Consensus 132 vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~ 210 (551)
+|||++|++|++|+++.+|+||+|++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+++|+|+++
T Consensus 106 vIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 106 VMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 999999999999999999999999999999999985 77 678899999999999999999999999999999999999
Q ss_pred EEEe--cCCcEEE--ccC--CCch--hHHHhhcCCCCcceeeEEEEEee------------eecCc-eEEEEEEEcCC--
Q 008842 211 LLMD--ANGRLLN--REA--MGED--VFWAIRGGGGGVWGIVYAWKIKL------------LQVPR-VVSGFVLSRPG-- 267 (551)
Q Consensus 211 ~vV~--~~G~i~~--~~~--~~~d--Lf~a~rG~g~g~fGiVt~~~~~l------------~p~p~-~~~~~~~~~~~-- 267 (551)
|||+ ++|++++ ++. +++| ||||+||+|+|+|||||+++||+ +|.|+ .+..+.+.++.
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 9999 5599843 343 5554 99999998678999999999999 99865 44454444432
Q ss_pred -CHhHHHHHHHHHHHHCCC--CCccc----eeEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCC----CC-
Q 008842 268 -SKQHVAKLVNKWQHVAPN--LTDDF----YLSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPE----LR- 335 (551)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~--~p~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~----l~- 335 (551)
+.+.+.++++.|+++... .|++. ...+.+.. ...+ .+.+...|.|+.+++.+++++++.. ++
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~ 337 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTR----SQSG--ALAMTTQLDATGPDAEKRLETYLAAVSEGVGV 337 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC----GGGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTTCSS
T ss_pred cCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEecc----CCCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCC
Confidence 335566778877776432 45442 22222211 1111 3445566888877776777664432 22
Q ss_pred CCcCCceeecHHHHHHHhcCCCCCCchhhhccccCCCCcccccccccccCCCCHHHHHHHHHHHhcC----CceEEEEee
Q 008842 336 VSEKDGKEMSWIESILFFSGLSNGSTISDLKKRYNQDKNYFKAKSDYVRTPISVTGIRTALEILDKE----PKGYVIFDP 411 (551)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~----p~~~~~~~~ 411 (551)
.....+..++|.+....+...+.+ .. ...++.++.++...++.+.++.+++.+... +.+.+.+++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 406 (530)
T 2y3s_A 338 QPHSDTRRLPWLHSTRWPGIAGDG--------DM---TGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIA 406 (530)
T ss_dssp CCEEEEEEEEHHHHTTCHHHHCCC--------CC---CSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEE
T ss_pred CccceeeeccHHHHHHhhcCCCCC--------cc---cccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEe
Confidence 223456678898754322111000 00 013455677776678889999999888653 236788999
Q ss_pred cCCccccCCCCCCCCCCCCCCeEEEEEEEEecCCCCcchhhHHHHHHHHHHhhccCcC------CCCCceeccCCCCccC
Q 008842 412 YGGIMHKIGSEEIAFPHRNGNLFTIQYIVAWYGEDNDKSNGYIDWIRAFYNAMTPFVS------WGPRAAYINYMDIDLG 485 (551)
Q Consensus 412 ~gGai~~~~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~~~~i~~~~~~~~~~~~------~~~~g~Y~Ny~d~~l~ 485 (551)
+||++++++.++++|+||+. +|.+++...|.++.+ .++..+|++++++.+.+... ....|+|+||+|.++.
T Consensus 407 ~GGav~~~~~~~ta~~~R~~-~~~~~~~~~w~~~~~--~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~ 483 (530)
T 2y3s_A 407 YGGKVNAVPADRTAVAQRDS-ILKIVYVTTWEDPAQ--DPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLA 483 (530)
T ss_dssp CCGGGGGSCTTSSSCCCCSC-SEEEEEEEEECCTTC--HHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGG
T ss_pred cCCccccCCCCcCccccccc-ceeEEEEEecCCCcc--hHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcccc
Confidence 99999999999999999995 788888999976443 35678999999998873321 1135799999998865
Q ss_pred ccccccCCCCCchhHHHHHHHhhhhhcccHHHHHHHHhhcCCCCcccCCCCCCCC
Q 008842 486 EMELINSSFPSKDAVEIARVWGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPPT 540 (551)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~~ 540 (551)
.++|..+ ...|++.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 484 ~~~~~~s----------~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 484 DEEWNTS----------GVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp CTTTCCS----------SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccccccc----------hhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 4333211 02388999999999999999999999999999999986
No 8
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=6.2e-67 Score=566.77 Aligned_cols=464 Identities=24% Similarity=0.413 Sum_probs=352.6
Q ss_pred ccHHhHHhhcCCCCcccCCCCCCCCCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeE
Q 008842 29 LNFISCLNRYNVNNFTLFPNIQNDHSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMEL 108 (551)
Q Consensus 29 ~~~~~cl~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~ 108 (551)
+.+..|+...+. . ++.|.++.|... .+.||.|+. ..|.+|++|+|++||+++|++|+++++|+
T Consensus 7 ~~l~~~l~~~~~--~---------~~~~~~~~y~~~--~~~~~~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~ 69 (503)
T 1zr6_A 7 NSINACLAAADV--E---------FHEEDSEGWDMD--GTAFNLRVD----YDPAAIAIPRSTEDIAAAVQCGLDAGVQI 69 (503)
T ss_dssp CHHHHHHHHTTC--E---------ECCTTSHHHHHH--TSCSBGGGC----CCCSEEEECCSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHhhCcCCc--e---------ecCCCccchHHH--hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCeE
Confidence 567788875431 1 123448889875 356666654 68999999999999999999999999999
Q ss_pred EEEcCCCCCCCCccccCCCCeEEEEEcCCCCceEEeCCCCEEEEecCCCHHHHHHHHHHcCCcccccCCCCCcccccccc
Q 008842 109 RVRCGGHSYEGTSSFSSDGASFVILDMSNLNKISVDLESETAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHI 188 (551)
Q Consensus 109 ~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~ 188 (551)
.|||||||+.+.+..+.++ +++|||++||+|++| ++++|+||+|++|.+|+++|.+++ ++.+|+|.|++|||||++
T Consensus 70 ~v~ggGh~~~~~~~~~~~~--gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~ 145 (503)
T 1zr6_A 70 SAKGGGHSYGSYGFGGEDG--HLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHV 145 (503)
T ss_dssp EEESSCCCTTCTTTTSSSS--CEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHH
T ss_pred EEECCCcCCCCCcccCCCC--cEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhh
Confidence 9999999998766542233 499999999999999 888999999999999999996654 378899999999999999
Q ss_pred ccCCccccccccCccccceeeeEEEecCCcEEEcc-CCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCC
Q 008842 189 GGGGFGLLSRKYGLAADNVVDALLMDANGRLLNRE-AMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPG 267 (551)
Q Consensus 189 ~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~-~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~ 267 (551)
+|||+|+++++||+++|+|+++|||++||++++++ .+++|||||+||| +|+|||||+++||++|.|+....+.+.+..
T Consensus 146 ~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~-~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~ 224 (503)
T 1zr6_A 146 LGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGG-GGGFAIVSEFEFNTFEAPEIITTYQVTTTW 224 (503)
T ss_dssp HHCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTC-CSSSCEEEEEEECCEECCSCEEEEEEEECC
T ss_pred cCCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhcc-CCCcEEEEEEEEEEEecCceeEEEEEEEeC
Confidence 99999999999999999999999999999999987 5789999999999 579999999999999999876666666554
Q ss_pred CHhHHHHHHHHHHHHCCC-CCccceeEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCCCCCC--cCCceee
Q 008842 268 SKQHVAKLVNKWQHVAPN-LTDDFYLSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPELRVS--EKDGKEM 344 (551)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~l~~~--~~~~~~~ 344 (551)
+.+++.+++..|+++... +|+++...+.+.. ..+.+.++|+|+.+++.+++++++..++.. ...+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---------~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~ 295 (503)
T 1zr6_A 225 NRKQHVAGLKALQDWAQNTMPRELSMRLEINA---------NALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVET 295 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCTTBCCEEEEET---------TEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhhcCChhHEEEEEEeC---------CeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeC
Confidence 567788889999888654 7887765554432 145566788999988888888765544431 2345678
Q ss_pred cHHHHHHHhcCCCCCCchhhhccccCCCCcccccccccccCCCCHHHHHHHHHHHh-cCC-----ceEEEEeecCC---c
Q 008842 345 SWIESILFFSGLSNGSTISDLKKRYNQDKNYFKAKSDYVRTPISVTGIRTALEILD-KEP-----KGYVIFDPYGG---I 415 (551)
Q Consensus 345 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~-~~p-----~~~~~~~~~gG---a 415 (551)
+|.+.+..+.+. ...... .....+..++.++.++.+ ++.+.++.+++.+. ..+ .+.+.++++|| +
T Consensus 296 ~~~~~~~~~~~~---~~~~~~--~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~a 369 (503)
T 1zr6_A 296 DWYGQINTYLYG---ADLNIT--YNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSA 369 (503)
T ss_dssp CHHHHHTTSCTT---CCSSCS--SCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCS
T ss_pred CHHHHHHHHcCC---Cccccc--CCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhh
Confidence 898765333211 000000 000112245667777666 78899999998886 432 13578899999 8
Q ss_pred cccCCCCCCCCCCCCCCeEEEEEEEEe-----cCCCCcchhhHHHHHHHHHHhhccCcCCCCCceeccCCCCccCccccc
Q 008842 416 MHKIGSEEIAFPHRNGNLFTIQYIVAW-----YGEDNDKSNGYIDWIRAFYNAMTPFVSWGPRAAYINYMDIDLGEMELI 490 (551)
Q Consensus 416 i~~~~~~~tafphR~~~~~~i~~~~~w-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~Y~Ny~d~~l~~~~~~ 490 (551)
+.+++.++++|+||+. +|.++++..| .++.. .++..+|++++++.+.........|+|+||+|.++.
T Consensus 370 v~~~~~~~ta~~~R~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~----- 441 (503)
T 1zr6_A 370 LAAVSNDETAYAHRDQ-LWLWQFYDSIYDYENNTSPY--PESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT----- 441 (503)
T ss_dssp GGGSCTTTSSCCCTTC-SEEEEEEEEETTTTTCCTTT--TTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----
T ss_pred hcCCCcccCCcccccc-eeEEEEEeeeccccCCCccc--hHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----
Confidence 9998889999999995 6777776776 22211 244567888877766654322134799999997652
Q ss_pred cCCCCCchhHHHHHHHhhhhhcccHHHHHHHHhhcCCCCcccCCCCCCCCcccCcCCCC
Q 008842 491 NSSFPSKDAVEIARVWGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPPTFSLGFKGKS 549 (551)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~~~~~~~~~~~ 549 (551)
...|++.|||+||+||++||+||||+|||+++|+|+|..-....+.|
T Consensus 442 ------------~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~w~~~~~~~ 488 (503)
T 1zr6_A 442 ------------KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAYLEQKLIS 488 (503)
T ss_dssp ------------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCCC-------
T ss_pred ------------cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchhhhhhhccC
Confidence 13688999999999999999999999999999999998654444443
No 9
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.6e-66 Score=565.38 Aligned_cols=446 Identities=24% Similarity=0.417 Sum_probs=337.7
Q ss_pred CCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEE
Q 008842 53 HSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVI 132 (551)
Q Consensus 53 ~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vv 132 (551)
|+.|+|+.|+..+ .+.||.||. ..|.+||+|+|++||+++|++|+++++++.||||||++.|.+... ++ +|+
T Consensus 32 v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~-~~--gvv 103 (521)
T 2ipi_A 32 KVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDP-AV--RAV 103 (521)
T ss_dssp EEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCT-TC--CEE
T ss_pred EECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccC-CC--eEE
Confidence 3445599999764 467888885 589999999999999999999999999999999999998876542 23 499
Q ss_pred EEcCCCCceEEeCCCCEEEEecCCCHHHHHHHHH-HcCCcccccCCCCCccccccccccCCccccccccCccccceeeeE
Q 008842 133 LDMSNLNKISVDLESETAWVQGGATLGETYSAIS-EASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDAL 211 (551)
Q Consensus 133 Idl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~ 211 (551)
|||++||+|++|+++.+|+||+|++|++|+++|. ++| +.+++|.|++|||||+++|||+|+++++||+++|+|+++|
T Consensus 104 Idl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~e 181 (521)
T 2ipi_A 104 IDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVE 181 (521)
T ss_dssp EECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEE
T ss_pred EecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEE
Confidence 9999999999999999999999999999999997 677 7789999999999999999999999999999999999999
Q ss_pred EEecC--CcEEE--ccC--CCc--hhHHHhhcCCCCcceeeEEEEEee-----------eecCc-eEEEEEEEcCC---C
Q 008842 212 LMDAN--GRLLN--REA--MGE--DVFWAIRGGGGGVWGIVYAWKIKL-----------LQVPR-VVSGFVLSRPG---S 268 (551)
Q Consensus 212 vV~~~--G~i~~--~~~--~~~--dLf~a~rG~g~g~fGiVt~~~~~l-----------~p~p~-~~~~~~~~~~~---~ 268 (551)
||++| |++++ ++. +++ |||||+||||+|+|||||+++||+ +|.|+ .+..+.+.++. +
T Consensus 182 vV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 261 (521)
T 2ipi_A 182 VVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSALT 261 (521)
T ss_dssp EEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTCC
T ss_pred EEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEecccccC
Confidence 99977 99743 342 455 599999997679999999999999 99875 34444444432 3
Q ss_pred HhHHHHHHHHHHHHCCC--CCcc----ceeEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCC----CC-CC
Q 008842 269 KQHVAKLVNKWQHVAPN--LTDD----FYLSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPE----LR-VS 337 (551)
Q Consensus 269 ~~~~~~~~~~~~~~~~~--~p~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~----l~-~~ 337 (551)
.+.+.++++.|+++... .|++ +...+.+.. ...+ .+.+...|.|+.+++.+++++++.. ++ ..
T Consensus 262 ~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~----~~~~--~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~g~~~ 335 (521)
T 2ipi_A 262 EEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNS----RAAG--QILLDIQIDGGLDGAEALLNDFVAAVNEGTGVEP 335 (521)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEEC----TTSC--EEEEEEEEETTSTTHHHHHHHHHHHHTTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHhccCCCccccceEEEEEecc----CCCC--ceEEEEEeccCHHHHHHHHHHHHHHHHhhcCCCc
Confidence 34566788888776432 4554 222222211 1112 3445566888877776666664432 22 22
Q ss_pred cCCceeecHHHHHHHhcCCCCCCchhhhccccCCCCcccccccccccCCCCHHHHHHHHHHHhcCC--ceEEEEeecCCc
Q 008842 338 EKDGKEMSWIESILFFSGLSNGSTISDLKKRYNQDKNYFKAKSDYVRTPISVTGIRTALEILDKEP--KGYVIFDPYGGI 415 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~p--~~~~~~~~~gGa 415 (551)
...+..++|.+....+..... ....++.++.++...++.+.++++++.+...+ .+.+.++++||+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~GG~ 402 (521)
T 2ipi_A 336 AVQRSTEPWLRATLANKFDTG-------------GFDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYSYGGK 402 (521)
T ss_dssp EEEEEEECHHHHHTCCCCCCT-------------TCCEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEEEEEECCGG
T ss_pred cceeeecCHHHHHHhhcCCCC-------------CCccceeeccccccCCCHHHHHHHHHHHHhCCCCceEEEEEecCCc
Confidence 244567899886533221100 00123445666666688899999998887543 467889999999
Q ss_pred cccCCCCCCCCCCCCCCeEEEEEEEEecCCCCcchhhHHHHHHHHHHhhccCcCC------CCCceeccCCCCccCcccc
Q 008842 416 MHKIGSEEIAFPHRNGNLFTIQYIVAWYGEDNDKSNGYIDWIRAFYNAMTPFVSW------GPRAAYINYMDIDLGEMEL 489 (551)
Q Consensus 416 i~~~~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~g~Y~Ny~d~~l~~~~~ 489 (551)
+++++.++++|+||+. ++.+++...|.++. ..++..+|++++++.+.+.... ...|+|+||+|.++..++|
T Consensus 403 v~~~~~~~ta~~~R~~-~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~~ 479 (521)
T 2ipi_A 403 VNSVPETATATAQRDS-IIKVWMSATWMDPA--HDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVDERW 479 (521)
T ss_dssp GGGSCTTTSSCCCCSC-SEEEEEEEEESCGG--GHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGCTTT
T ss_pred ccCCCCccccccccch-hhhcceeEecCCCC--chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCcccccccc
Confidence 9999999999999995 78888889997543 2356789999999998733211 1357999999987643222
Q ss_pred ccCCCCCchhHHHHHHHhhhhhcccHHHHHHHHhhcCCCCcccCCCCCCCC
Q 008842 490 INSSFPSKDAVEIARVWGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPPT 540 (551)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~Y~G~n~~RL~~IK~kyDP~~vF~~~qsI~~~ 540 (551)
..+ ...|++.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 480 ~~~----------~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 480 NTS----------GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SCC----------SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccc----------hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 110 02388999999999999999999999999999999985
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=2e-64 Score=542.53 Aligned_cols=435 Identities=23% Similarity=0.317 Sum_probs=330.1
Q ss_pred CCCCCCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEE
Q 008842 53 HSEEANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVI 132 (551)
Q Consensus 53 ~~~~~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vv 132 (551)
|+.|.|+.|.... ..||.++. ..|.+|++|+|++||+++|++|+++++++.+||||||+.+.+.. ++ +++
T Consensus 16 v~~p~~~~y~~~~--~~~~~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~--~~--gvv 85 (459)
T 2bvf_A 16 VIYPDDSGFDAIA--NIWDGRHL----QRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATN--DG--GIV 85 (459)
T ss_dssp EECTTSTTHHHHH--CCSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCC--SS--SEE
T ss_pred EECCCCccHHHHH--HHhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCcccc--CC--eEE
Confidence 5666799999753 55565544 68999999999999999999999999999999999999886643 33 499
Q ss_pred EEcCCCCceEEeCCCCEEEEecCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCCccccccccCccccceeeeEE
Q 008842 133 LDMSNLNKISVDLESETAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALL 212 (551)
Q Consensus 133 Idl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~v 212 (551)
|||++|++|++|+++.+++||+|++|++|+++|.++| +.+++|.|+++||||+++|||+|+++++||+++|+|+++||
T Consensus 86 i~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~v 163 (459)
T 2bvf_A 86 LDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATL 163 (459)
T ss_dssp EECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEE
T ss_pred EECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEE
Confidence 9999999999999999999999999999999999887 78888999999999999999999999999999999999999
Q ss_pred EecCCcEEEcc-CCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHHHHHHHHHCCCCCccce
Q 008842 213 MDANGRLLNRE-AMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKLVNKWQHVAPNLTDDFY 291 (551)
Q Consensus 213 V~~~G~i~~~~-~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 291 (551)
|++||++++++ .+++|||||+||| +|+|||||+++||++|.|..+....+.++.+.....+++..++++.+.+|+++.
T Consensus 164 V~~~G~i~~~~~~~~~dLf~a~rg~-~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (459)
T 2bvf_A 164 VTATGDVIYCSDDERPELFWAVRGA-GPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALNEMADHIY 242 (459)
T ss_dssp ECTTSCEEEEESSSSHHHHHHHHHH-GGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred EcCCCeEEEeCCCCChhhHhHhhcc-CCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHHhCcHhhc
Confidence 99999999987 5789999999998 699999999999999997665555555553222222677777777655666653
Q ss_pred eEEEEecCCCCcCCcceEEEEEEEeeCChHHHHHHhhhhCCCCC-CCcCCceeecHHHHHHHhcCCCCCCchhhhccccC
Q 008842 292 LSCFIGAGLPETKSIGLSATFKGFYLGPKHEALTILNNFFPELR-VSEKDGKEMSWIESILFFSGLSNGSTISDLKKRYN 370 (551)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 370 (551)
..+.+.. ...+...+.+...|.|+.+++.+.++++. +++ .....+..++|.+........ . ...
T Consensus 243 ~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~ 307 (459)
T 2bvf_A 243 PSVFVGV----DENRAPSVTVCVGHLGGLDIAERDIARLR-GLGRTVSDSIAVRSYDEVVALNAEV---------G-SFE 307 (459)
T ss_dssp CEEEEEE----CTTCCEEEEEEEECCSCHHHHHHHHHHHH-TTSCCSEECCEEECHHHHHHHHHHH---------S-CCC
T ss_pred cccccCc----ccCCCceEEEEEEEeCCHHHHHHHHHHHH-HhCcchhcceeecCHHHHHhccccc---------c-cCC
Confidence 3221111 11223445566778899887777776543 332 233456778888754331100 0 001
Q ss_pred CCCccccc-ccccccCCCCHHHHHHHHHHHhcCC-ce-EEEEeecCCccccCCCCCCCCCCCCCCeEEEEEEEEecCCCC
Q 008842 371 QDKNYFKA-KSDYVRTPISVTGIRTALEILDKEP-KG-YVIFDPYGGIMHKIGSEEIAFPHRNGNLFTIQYIVAWYGEDN 447 (551)
Q Consensus 371 ~~~~~f~~-~s~~~~~~~~~~~i~~~~~~~~~~p-~~-~~~~~~~gGai~~~~~~~tafphR~~~~~~i~~~~~w~~~~~ 447 (551)
.....+.. ++.++...++.+.++++++.+.+.+ .. .+.++.+||++.+ .+.++|+||+. .| +++...|.++.+
T Consensus 308 ~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~~-~~-~~~~~~w~~~~~ 383 (459)
T 2bvf_A 308 DGMSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRDA-MG-VLALAEWSGAAP 383 (459)
T ss_dssp CSCEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCSS-CE-EEEEEEECTTST
T ss_pred CCCcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCCc-ce-EEEEEEeCCCcc
Confidence 11122232 4555543355667777766665433 22 4456666888776 66799999997 56 888899976541
Q ss_pred cchhhHHHHHHHHHHhhccCcCCCCCceeccCCCCccCccccccCCCCCchhHHHHHHHhhhhhccc-HHHHHHHHhhcC
Q 008842 448 DKSNGYIDWIRAFYNAMTPFVSWGPRAAYINYMDIDLGEMELINSSFPSKDAVEIARVWGEKYFLKN-YDRLVKAKTIID 526 (551)
Q Consensus 448 ~~~~~~~~~i~~~~~~~~~~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~Y~G~n-~~RL~~IK~kyD 526 (551)
..+.+.+|++++++.+.++....++|+|+||+|.+. +.|.+.|||+| |+||++||+|||
T Consensus 384 -~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------------~~~~~~~yG~~n~~rL~~iK~kyD 443 (459)
T 2bvf_A 384 -GSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------------AEMVAEVYKPEVYSRLAAVKREYD 443 (459)
T ss_dssp -TTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------------HHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred -chHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------------hHHHHHHhCcchHHHHHHHHHHhC
Confidence 124568999999999998753334789999999652 45788999987 999999999999
Q ss_pred CCCcccCCCCCCC
Q 008842 527 PNNIFSNQQGIPP 539 (551)
Q Consensus 527 P~~vF~~~qsI~~ 539 (551)
|+|+|+++|+|+|
T Consensus 444 P~~vF~~~~~I~p 456 (459)
T 2bvf_A 444 PENRFRHNYNIDP 456 (459)
T ss_dssp TTCCCCSSSCCCC
T ss_pred cccccCCCCCCCC
Confidence 9999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.2e-39 Score=354.01 Aligned_cols=198 Identities=18% Similarity=0.248 Sum_probs=169.5
Q ss_pred cCCCCCCCceEEEeeCCHHHHHHHHHHHHh--C-CCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCce------EEe
Q 008842 74 FTDSSVPKPVAIILPESIDQLANSVLCCRN--E-SMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKI------SVD 144 (551)
Q Consensus 74 ~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~--~-~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i------~~d 144 (551)
|.......|.+|++|+|++||+++|++|++ + ++|+.+||||||+.|.+.+ .+ +++|||++||+| ++|
T Consensus 61 ~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~~--~~--gvvi~l~~m~~i~~~~~~~~d 136 (534)
T 1w1o_A 61 FGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFA--PG--GVVVNMASLGDAAAPPRINVS 136 (534)
T ss_dssp TTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCC--TT--SEEEEGGGGGCSSSSCSEEEC
T ss_pred ccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcCC--CC--eEEEECccccccccCccEEEc
Confidence 433344689999999999999999999998 6 9999999999999887765 33 499999999984 899
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHcCCccccc-CCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEcc
Q 008842 145 LESETAWVQGGATLGETYSAISEASNTHGFS-AGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNRE 223 (551)
Q Consensus 145 ~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~-~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~ 223 (551)
+++.+++||||++|.+|++++.++|+ ..+ .+.+..++|||.+++||.|..+++||.++|+|+++|||++||++++++
T Consensus 137 ~~~~~v~v~aGv~~~~l~~~~~~~Gl--~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~ 214 (534)
T 1w1o_A 137 ADGRYVDAGGEQVWIDVLRASLARGV--APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCS 214 (534)
T ss_dssp TTSSEEEEETTCBHHHHHHHHHTTTE--EESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEE
T ss_pred CCCCEEEECCCcCHHHHHHHHHHCCC--cccCCCCCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEEC
Confidence 88899999999999999999999884 333 344467889999999999999999999999999999999999999997
Q ss_pred -CCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHHHHHH
Q 008842 224 -AMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKLVNKW 279 (551)
Q Consensus 224 -~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~ 279 (551)
.+++||||++||+ +|+|||||+++||++|.|+....+.+.+. +.+.+.+.+..+
T Consensus 215 ~~~~~dL~~~~rGs-~G~~GIVt~~~l~l~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 269 (534)
T 1w1o_A 215 KQLNADLFDAVLGG-LGQFGVITRARIAVEPAPARARWVRFVYT-DFAAFSADQERL 269 (534)
T ss_dssp SSSSHHHHHHHTTC-TTCSEEEEEEEEEEEECCSEEEEEEEEES-CHHHHHHHHHHH
T ss_pred CCCChhhHhhhcCC-CCCcEEEEEEEEEEEECCcceEEEEEEeC-CHHHHHHHHHHH
Confidence 5789999999999 68999999999999999987666656554 455555554443
No 12
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=6.1e-35 Score=325.54 Aligned_cols=200 Identities=22% Similarity=0.252 Sum_probs=177.6
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccC-CCCeEEEEEcCCCCce-EEeCCCCEEEEecCCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSS-DGASFVILDMSNLNKI-SVDLESETAWVQGGAT 157 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~-~g~~~vvIdl~~l~~i-~~d~~~~~v~v~~G~~ 157 (551)
..|.+||+|+|++||+++|++|++++++|++||||||+.|.+.+.. +...+|+|||++||+| +||+++.+++||||++
T Consensus 204 ~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~ 283 (658)
T 4bby_A 204 RIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGIT 283 (658)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred CCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCch
Confidence 6899999999999999999999999999999999999877655421 2223699999999998 9999999999999999
Q ss_pred HHHHHHHHHHcCCcccccCCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEcc-----CCCchhHHH
Q 008842 158 LGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNRE-----AMGEDVFWA 232 (551)
Q Consensus 158 ~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~-----~~~~dLf~a 232 (551)
+.+|.++|.++|+.+++.+++....+|||++++++.|..+.+||.++|+|+++|||++||++++.. ..++||+|+
T Consensus 284 ~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aGyDL~~L 363 (658)
T 4bby_A 284 GQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTGPDIHHF 363 (658)
T ss_dssp HHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSSSCTHHH
T ss_pred HHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCCcCHHHH
Confidence 999999999999777777788888899999999999999999999999999999999999998753 357999999
Q ss_pred hhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHHHHHHHH
Q 008842 233 IRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKLVNKWQH 281 (551)
Q Consensus 233 ~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (551)
++|+ .|+|||||+++|||+|.|+....+.+.|+ +.+++.+++..+.+
T Consensus 364 ~iGS-EGTLGIITeatLrL~P~P~~~~~~~~~f~-d~~~a~~av~~i~~ 410 (658)
T 4bby_A 364 IMGS-EGTLGVITEATIKIRPTPEYQKYGSVAFP-NFEQGVACLREIAK 410 (658)
T ss_dssp HTTC-TTSSCEEEEEEEECEECCSEEEEEEEEES-SHHHHHHHHHHHHH
T ss_pred hccC-CCcCcceeeeeeeeccCCccccccccccC-CchhhhhhHHHHHH
Confidence 9999 89999999999999999998877777776 67777777766543
No 13
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=6.6e-34 Score=305.32 Aligned_cols=196 Identities=20% Similarity=0.254 Sum_probs=167.0
Q ss_pred ccCCCCCCCceEEEeeCCHHHHHHHHHHHHhC--CCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCce-EEeCCCCE
Q 008842 73 RFTDSSVPKPVAIILPESIDQLANSVLCCRNE--SMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKI-SVDLESET 149 (551)
Q Consensus 73 r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~--~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i-~~d~~~~~ 149 (551)
+|.. ....|.+|++|+|++||+++|++|+++ ++++.++|+|||+.+.+.. .+ +++|||++||+| ++|+++++
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~-~~---gvvIdl~~l~~i~~~d~~~~~ 109 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN-GG---GLVIDMTPLNTIHSIDADTKL 109 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC-TT---SEEEECTTCCCEEEEETTTTE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC-cC---eEEEECccCCCceEEcCCCCE
Confidence 4532 357999999999999999999999999 7999999999999776653 23 499999999999 99999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEcc-C-CCc
Q 008842 150 AWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNRE-A-MGE 227 (551)
Q Consensus 150 v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~-~-~~~ 227 (551)
|+||||+++.+|+++|.++|+.+...+|. +.++|||.+.+|++|..++.||..+|+|+++|||++||++++++ . +++
T Consensus 110 v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~ 188 (481)
T 4feh_A 110 VDIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDA 188 (481)
T ss_dssp EEEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTH
T ss_pred EEEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCCh
Confidence 99999999999999999999654444555 46789999999999999999999999999999999999999998 4 689
Q ss_pred hhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHH
Q 008842 228 DVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKL 275 (551)
Q Consensus 228 dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~ 275 (551)
|||||+||| +|+|||||+++||++|.|+...........+.+++.+.
T Consensus 189 dLf~a~rgs-~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~ 235 (481)
T 4feh_A 189 ELFWATVGG-NGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIAL 235 (481)
T ss_dssp HHHHHHTTC-TTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHH
T ss_pred HHHHHhhcc-CCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHH
Confidence 999999998 79999999999999999876554433322244444443
No 14
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=4.5e-33 Score=302.72 Aligned_cols=201 Identities=21% Similarity=0.318 Sum_probs=168.4
Q ss_pred cCCCCCCCceEEEeeCCHHHHHHHHHHHHh-CCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCceEEeC-----CC
Q 008842 74 FTDSSVPKPVAIILPESIDQLANSVLCCRN-ESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKISVDL-----ES 147 (551)
Q Consensus 74 ~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~-~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~~d~-----~~ 147 (551)
|.......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+.+ .+ +|+|||++||+|++|+ ++
T Consensus 54 ~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~--~~--gvvidl~~m~~i~i~~~~~~~~~ 129 (524)
T 2exr_A 54 FGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMA--EG--GLVVDMSTTAENHFEVGYLSGGD 129 (524)
T ss_dssp TTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCC--TT--SEEEEGGGGTTSCEEEEECCSSS
T ss_pred ccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccC--CC--EEEEECcCCCCcEEeecccCCCC
Confidence 433334689999999999999999999996 99999999999999887765 23 4999999999987776 55
Q ss_pred --CEEEEecCCCHHHHHHHH-HHcCCcccccCCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEcc-
Q 008842 148 --ETAWVQGGATLGETYSAI-SEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNRE- 223 (551)
Q Consensus 148 --~~v~v~~G~~~~~l~~~l-~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~- 223 (551)
.+++||||++|.++++++ .++|+. ....+.++.++|||.+.++|.|..+.+||.++|+|+++|||++||++++++
T Consensus 130 ~~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~ 208 (524)
T 2exr_A 130 ATAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSE 208 (524)
T ss_dssp SSEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEES
T ss_pred CceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECC
Confidence 799999999999986654 488853 222344566889999999999999999999999999999999999999987
Q ss_pred CCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHHHHHHHH
Q 008842 224 AMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKLVNKWQH 281 (551)
Q Consensus 224 ~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (551)
.+++||||++||+ .|+|||||+++|||+|.|+....+.+.+. +.+++.+.+..+..
T Consensus 209 ~~~~dL~~~~~Gs-~GtlGiIt~~tl~l~p~p~~~~~~~~~f~-~~~~~~~~~~~l~~ 264 (524)
T 2exr_A 209 IENSELFFSVLGG-LGQFGIITRARVLLQPAPDMVRWIRVVYT-EFDEFTQDAEWLVS 264 (524)
T ss_dssp SSSHHHHHHHTTC-TTSSEEEEEEEEEEEECCSEEEEEEEEES-CHHHHHHHHHHHHT
T ss_pred CCChhHHhHhhcC-CCccEEEEEEEEEEEEcCCeeEEEEEEeC-CHHHHHHHHHHHHH
Confidence 4689999999999 79999999999999999987766656665 56666666655543
No 15
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=3.1e-32 Score=289.40 Aligned_cols=191 Identities=19% Similarity=0.233 Sum_probs=160.8
Q ss_pred cCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCce-EEeCCCCEEEE
Q 008842 74 FTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKI-SVDLESETAWV 152 (551)
Q Consensus 74 ~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i-~~d~~~~~v~v 152 (551)
|.......|.+|++|+|++||+++|++| +++.++|||||+.+.+....+ +++|||++||+| ++|+++++++|
T Consensus 13 w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~~---g~vi~l~~l~~i~~~d~~~~~v~v 85 (422)
T 2vfr_A 13 WAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGDG---GVLLSLAGLPSVVDVDTAARTVRV 85 (422)
T ss_dssp SSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCTT---CEEECSTTSCCCEEEETTTTEEEE
T ss_pred CCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCCC---cEEEEhhhCCCcEEEcCCCCEEEE
Confidence 4444447899999999999999999998 899999999999887773223 499999999998 99999999999
Q ss_pred ecCCCHHHHHHHHHHcCCccccc-CCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEccC-CCchhH
Q 008842 153 QGGATLGETYSAISEASNTHGFS-AGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNREA-MGEDVF 230 (551)
Q Consensus 153 ~~G~~~~~l~~~l~~~g~~~~~~-~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~~-~~~dLf 230 (551)
|||+++.+|+++|.++|+. ++ .+.++.++|||.+++|++|.. .+||.++|+|+++++|++||++++++. +++ |
T Consensus 86 ~aG~~l~~l~~~l~~~Gl~--l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f 160 (422)
T 2vfr_A 86 GGGVRYAELARVVHARGLA--LPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--F 160 (422)
T ss_dssp ETTCBHHHHHHHHHHTTEE--CSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--G
T ss_pred cCCCCHHHHHHHHHHcCCc--ccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--c
Confidence 9999999999999999954 44 477788999999999999976 799999999999999999999999974 444 9
Q ss_pred HHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHH-HHHHHH
Q 008842 231 WAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVA-KLVNKW 279 (551)
Q Consensus 231 ~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~-~~~~~~ 279 (551)
|+++|+ +|++||||+++||++|.|+......... +.+++. +.+..+
T Consensus 161 ~~~~g~-~G~lGvit~~~l~l~p~~~~~~~~~~~~--~~~~~~~~~~~~~ 207 (422)
T 2vfr_A 161 GGAVTS-LGALGVVTSLTLDLEPAYEMEQHVFTEL--PLAGLDPATFETV 207 (422)
T ss_dssp GGTSSC-TTTTCEEEEEEEECEECCEEEEEEEEEE--CSTTCCHHHHHHH
T ss_pred ceEEec-CCCCEEEEEEEEEEEecCceEEEEEecC--CHHHHHHHHHHHH
Confidence 999998 7999999999999999998765443222 344444 555443
No 16
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.8e-32 Score=294.03 Aligned_cols=203 Identities=23% Similarity=0.305 Sum_probs=178.4
Q ss_pred cCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCce-EEeCCCCEEEE
Q 008842 74 FTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKI-SVDLESETAWV 152 (551)
Q Consensus 74 ~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i-~~d~~~~~v~v 152 (551)
|.......|.+|++|+|++||+++|++|+++++|+++||||||+.|.+.. +++ +++|||++||+| ++|+++.+++|
T Consensus 44 ~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~-~~g--gvvIdl~~m~~i~~id~~~~~v~V 120 (476)
T 3pm9_A 44 ERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTP-HNG--EVVISLKRMDKIREIDTSSNTITV 120 (476)
T ss_dssp TTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCC-CSS--CEEEECTTCCCEEEEETTTTEEEE
T ss_pred cccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccC-CCC--cEEEEeeCCCceEEEcCCCCeEEE
Confidence 43333468999999999999999999999999999999999999888776 233 599999999999 89999999999
Q ss_pred ecCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEcc------CCC
Q 008842 153 QGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNRE------AMG 226 (551)
Q Consensus 153 ~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~------~~~ 226 (551)
|||++|.+|++++.++|+.+++.++.+..++|||.+.+++.|+.+.+||.++|+|+++|||++||++++++ ..+
T Consensus 121 ~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g 200 (476)
T 3pm9_A 121 EAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTG 200 (476)
T ss_dssp ETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSS
T ss_pred CCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCC
Confidence 99999999999999999655555677778899999999999999999999999999999999999999863 246
Q ss_pred chhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHHHHHHHH
Q 008842 227 EDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKLVNKWQH 281 (551)
Q Consensus 227 ~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (551)
+||+|+++|+ +|+|||||+++||++|.|+......+.++ +.+++.+++..++.
T Consensus 201 ~dl~~l~~Gs-~GtlGIIt~~tl~l~p~p~~~~~~~~~~~-~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 201 YDLRDLFIGA-EGTLGIITAATLKLFPKPRAVETAFVGLQ-SPDDALKLLGIAQG 253 (476)
T ss_dssp CCCHHHHTTS-TTSSCEEEEEEEECEECCSEEEEEEEEES-CHHHHHHHHHHHHH
T ss_pred cCHHHHhccC-CCCcEEEEEEEEEEeecCceeEEEEEEcC-CHHHHHHHHHHHHH
Confidence 8999999998 79999999999999999987766666665 67788888877764
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=1.6e-31 Score=293.02 Aligned_cols=200 Identities=24% Similarity=0.271 Sum_probs=170.1
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCce-EEeCCCCEEEEecCCCH
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKI-SVDLESETAWVQGGATL 158 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i-~~d~~~~~v~v~~G~~~ 158 (551)
..|.+|++|+|++||+++|++|+++++|+++||||||+.|.+....+...+|+|||++||+| ++|+++.+++||||+++
T Consensus 136 ~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~ 215 (584)
T 2uuu_A 136 NAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMG 215 (584)
T ss_dssp CCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBH
T ss_pred CCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcH
Confidence 57999999999999999999999999999999999999877665211012699999999999 89999999999999999
Q ss_pred HHHHHHHHHcCCcccccCCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEc----cCCCchhHHHhh
Q 008842 159 GETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNR----EAMGEDVFWAIR 234 (551)
Q Consensus 159 ~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~----~~~~~dLf~a~r 234 (551)
.+|+++|.++|+.++..+++...++|||.+++|+.|+.+.+||.++|+|+++|||++||++++. +..++||+|+++
T Consensus 216 ~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~ 295 (584)
T 2uuu_A 216 PELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIIL 295 (584)
T ss_dssp HHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHHT
T ss_pred HHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhhc
Confidence 9999999999854433333345578999999999999999999999999999999999998862 246899999999
Q ss_pred cCCCCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHHHHHHHH
Q 008842 235 GGGGGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKLVNKWQH 281 (551)
Q Consensus 235 G~g~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (551)
|+ +|+|||||+++||++|.|+....+.+.++ +.+++.+++..+..
T Consensus 296 Gs-eGtlGIIT~~tlrl~p~p~~~~~~~~~f~-~~~~a~~~~~~~~~ 340 (584)
T 2uuu_A 296 GS-EGTLGIITEAVMKVHAVPQAVEYYGFLFP-TFAHAVSALQQIRS 340 (584)
T ss_dssp TC-TTSSCEEEEEEEECEECCSEEEEEEEEES-SHHHHHHHHHHHHH
T ss_pred cC-CCCcEEEEEEEEEEEecccceEEEEEEcC-CHHHHHHHHHHHHh
Confidence 98 79999999999999999987766666665 56777777776654
No 18
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.97 E-value=1e-29 Score=272.96 Aligned_cols=184 Identities=15% Similarity=0.183 Sum_probs=151.7
Q ss_pred ccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccC-CCCeEEEEEcC-CCCceEEeCC--CC
Q 008842 73 RFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSS-DGASFVILDMS-NLNKISVDLE--SE 148 (551)
Q Consensus 73 r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~-~g~~~vvIdl~-~l~~i~~d~~--~~ 148 (551)
+|.......|.+|++|+|++||+++|++|++++++|+++|||||+.+.++... ...++|+|||+ +||+|++|++ ..
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 36555567899999999999999999999999999999999999964433210 00136999995 6999999985 57
Q ss_pred EEEEecCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCCcccc----------ccccCccccceeeeEEEecCCc
Q 008842 149 TAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLL----------SRKYGLAADNVVDALLMDANGR 218 (551)
Q Consensus 149 ~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~----------s~~~G~~~D~v~~~~vV~~~G~ 218 (551)
+|+||+|+++.+|+++|.++|+.+...+| ++.++|||.+++|++|.. +++||.++|+|++++||++||+
T Consensus 101 tVtV~AGv~l~~L~~~L~~~GL~l~~~~g-i~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG~ 179 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAGLGVTAAPA-PGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDKA 179 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTTEECSCCCS-CSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEETT
T ss_pred EEEEccCCCHHHHHHHHHHcCCEEEecCC-CCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCCC
Confidence 99999999999999999999854333244 466899999999999886 6899999999999999999998
Q ss_pred -----EEEccCCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEE
Q 008842 219 -----LLNREAMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSG 260 (551)
Q Consensus 219 -----i~~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~ 260 (551)
+++++.+++||+ ++|+| .|. ||||+++||++|.++....
T Consensus 180 ~~~~~i~~~s~~~~DL~-a~r~G-~G~-gIVTevtlrl~P~~~l~~~ 223 (540)
T 3js8_A 180 SGAYALRKFARNDPQIA-PLLAH-VGR-SLIVEATLQAAPNQRLRCQ 223 (540)
T ss_dssp TTEEEEEEEETTSGGGH-HHHTC-TTS-SCEEEEEEEEEECCEEEEE
T ss_pred CceeeEEEeCCCChhHH-HHHhc-CCC-eEEEEEEEEEEECCceEEE
Confidence 777777789985 55555 355 6999999999999876543
No 19
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=7.4e-30 Score=277.84 Aligned_cols=195 Identities=23% Similarity=0.347 Sum_probs=162.3
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCC-CCccccCCCCeEEEEEcCCCCce-EEeCCCCEEEEecCCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYE-GTSSFSSDGASFVILDMSNLNKI-SVDLESETAWVQGGAT 157 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~-g~~~~~~~g~~~vvIdl~~l~~i-~~d~~~~~v~v~~G~~ 157 (551)
..|.+|++|+|++||+++|++|+++++|+.+||||||+. |.+.....+ +|+|||++||+| ++|+++.+++||||++
T Consensus 55 ~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~--gvvidl~~m~~i~~id~~~~~v~v~aGv~ 132 (520)
T 1wvf_A 55 HAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRG--QVILDLKKMNKIIKIDPEMCYALVEPGVT 132 (520)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTT--CEEEECTTCCCEEEEETTTTEEEECTTCC
T ss_pred CCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCC--eEEEECCCCCceEEECCCCCEEEECCCCC
Confidence 579999999999999999999999999999999999986 654431123 499999999999 9999999999999999
Q ss_pred HHHHHHHHHHcCCcccccCC---CCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEccC---CCchhHH
Q 008842 158 LGETYSAISEASNTHGFSAG---SCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNREA---MGEDVFW 231 (551)
Q Consensus 158 ~~~l~~~l~~~g~~~~~~~g---~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~~---~~~dLf~ 231 (551)
|.+|+++|.++|+. ++++ ....+||||.+++||.|.. +||.++|+|+++|||++||++++++. .++|+|+
T Consensus 133 ~~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~ 208 (520)
T 1wvf_A 133 FGQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQ 208 (520)
T ss_dssp HHHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTT
T ss_pred HHHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHh
Confidence 99999999999854 4433 2236889999988888875 99999999999999999999999862 5789877
Q ss_pred HhhcCCC---------CcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHHHHHHHH
Q 008842 232 AIRGGGG---------GVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKLVNKWQH 281 (551)
Q Consensus 232 a~rG~g~---------g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (551)
+.||+.+ ++|||||+++|||+|.|+.+..+.+.|+ +.+++.+++..+++
T Consensus 209 ~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~-~~~~~~~~~~~~~~ 266 (520)
T 1wvf_A 209 IFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFE-DEADIVEIVDALRP 266 (520)
T ss_dssp TCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEEC-CGGGHHHHHHHHHH
T ss_pred hhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeC-CHHHHHHHHHHHHH
Confidence 7766622 4899999999999999998877777776 45555555544444
No 20
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=1.5e-29 Score=276.91 Aligned_cols=200 Identities=11% Similarity=0.102 Sum_probs=164.6
Q ss_pred CCCC-CCcCcHHHhhhcccccccCCCCCCCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCC-CCeE
Q 008842 53 HSEE-ANYNYYELLNFSIQNLRFTDSSVPKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSD-GASF 130 (551)
Q Consensus 53 ~~~~-~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~-g~~~ 130 (551)
|++| +++.|... +.. |.......|.+|+.|+|++||+++|++|+++++++.++|||||+.+.++.... ..++
T Consensus 12 ~~~p~~~~~y~~~--~~~----w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~g 85 (561)
T 2i0k_A 12 PNFPNDIALFQQA--YQN----WSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKV 85 (561)
T ss_dssp TTCCTTSCCEEEE--EEC----TTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTE
T ss_pred eecCCCCHhHHHH--Hhh----hhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCe
Confidence 4555 78999863 233 44334478999999999999999999999999999999999999876654210 1136
Q ss_pred EEEEc-CCCCceEEeC--CCCEEEEecCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCCcccc----------c
Q 008842 131 VILDM-SNLNKISVDL--ESETAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLL----------S 197 (551)
Q Consensus 131 vvIdl-~~l~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~----------s 197 (551)
++||| ++||+|++|+ ++++|+||||++|.+|+++|.++|+.+...++. +.++|||.+.+|++|.. +
T Consensus 86 vvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~TvGG~i~~~~~G~~l~~gG~~~~s~ 164 (561)
T 2i0k_A 86 ILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAP-GVLSIGGALAVNAHGAALPAVGQTTLPG 164 (561)
T ss_dssp EEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSC-TTCBHHHHHHTTCCCSCCCCTTCCCCTT
T ss_pred EEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCC-CCcccCCCcccCCcccccccCCcccccc
Confidence 99999 8999999998 788999999999999999999999654444444 55788999888777765 7
Q ss_pred cccCccccceeeeEEEecCCc---EEEccCCCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEE
Q 008842 198 RKYGLAADNVVDALLMDANGR---LLNREAMGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFV 262 (551)
Q Consensus 198 ~~~G~~~D~v~~~~vV~~~G~---i~~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~ 262 (551)
++||..+|+|+++|||++||+ +++++.+++||+|+++|. |. ||||+++||++|.|+......
T Consensus 165 ~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~--G~-giIt~~tl~l~p~~~~~~~~~ 229 (561)
T 2i0k_A 165 HTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNL--GR-CFLTSVTMQAGPNFRQRCQSY 229 (561)
T ss_dssp CCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCT--TS-SCEEEEEEECEECCEEEEEEE
T ss_pred cccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcC--CC-EEEEEEEEEEEECCceEEEEE
Confidence 789999999999999999999 777776789999999865 34 899999999999997655443
No 21
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=1.7e-28 Score=268.89 Aligned_cols=198 Identities=20% Similarity=0.196 Sum_probs=162.8
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCC-CCccccCCCCeEEEEEc-CCCCce-EEeCCCCEEEEecCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYE-GTSSFSSDGASFVILDM-SNLNKI-SVDLESETAWVQGGA 156 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~-g~~~~~~~g~~~vvIdl-~~l~~i-~~d~~~~~v~v~~G~ 156 (551)
..|.+||+|+|++||+++|++|+++++||++||+|||+. |.+.+..++ +|+||| ++||+| ++|+++.+++||||+
T Consensus 69 ~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~--gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 69 FLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSG--SVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp SCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTT--CEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCC--EEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 579999999999999999999999999999999999985 554431123 499999 999999 999999999999999
Q ss_pred CHHHHHHHHHHcCCc--ccccCCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEEEccC---CCc----
Q 008842 157 TLGETYSAISEASNT--HGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLLNREA---MGE---- 227 (551)
Q Consensus 157 ~~~~l~~~l~~~g~~--~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~~---~~~---- 227 (551)
++.+|+++|.++|+. +.+.++.....||||.++++|.|+. +||..+|+|+++|||++||++++++. .++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999965 4433444446779999988888864 99999999999999999999999863 221
Q ss_pred -----------hhHHHhhcCC----------CCcceeeEEEEEeeeecCceEEEEEEEcCCCHhHHHHHHHHHHHH
Q 008842 228 -----------DVFWAIRGGG----------GGVWGIVYAWKIKLLQVPRVVSGFVLSRPGSKQHVAKLVNKWQHV 282 (551)
Q Consensus 228 -----------dLf~a~rG~g----------~g~fGiVt~~~~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (551)
+++|+++++| +|+|||||+++|||+|.|+....+.+.|+ +.+++.+++..++++
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~-~~~~a~~~~~~~~~~ 299 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLP-KDGDLKQAVDIIRPL 299 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEEC-STTHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcC-CHHHHHHHHHHHHHH
Confidence 6677776542 47999999999999999998777777776 556666666555544
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=9.2e-29 Score=269.38 Aligned_cols=198 Identities=15% Similarity=0.184 Sum_probs=166.7
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCC--eEEEEEcCCCCce-EEeCCCCEEEEecCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGA--SFVILDMSNLNKI-SVDLESETAWVQGGA 156 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~--~~vvIdl~~l~~i-~~d~~~~~v~v~~G~ 156 (551)
..|.+||+|+|++||+++|++|++++++|.++|||||+.|.+.+..++. ++|+|||++||+| ++|+ +++|+||||+
T Consensus 44 ~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aGv 122 (571)
T 1f0x_A 44 GDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPGT 122 (571)
T ss_dssp BCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTTC
T ss_pred CCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCCc
Confidence 6899999999999999999999999999999999999988877632211 2699999999999 7995 5789999999
Q ss_pred CHHHHHHHHHHcCCcccc-cCCCCCccccccccccCCccccccccCcccc----------------ceeeeEEEecCCcE
Q 008842 157 TLGETYSAISEASNTHGF-SAGSCPTVGVGGHIGGGGFGLLSRKYGLAAD----------------NVVDALLMDANGRL 219 (551)
Q Consensus 157 ~~~~l~~~l~~~g~~~~~-~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D----------------~v~~~~vV~~~G~i 219 (551)
++.+|.++|.++|+.+.. +++.|..++|||.+.++++|..+.+||..+| +|++++||++||++
T Consensus 123 ~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i 202 (571)
T 1f0x_A 123 TLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQI 202 (571)
T ss_dssp BHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHH
T ss_pred CHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcE
Confidence 999999999999853222 2234555689999999999999999999999 99999999999999
Q ss_pred EEcc------------------CCCc-----------------hhHHHh--hcCCCCcceeeEEEEEeeeecCceEEEEE
Q 008842 220 LNRE------------------AMGE-----------------DVFWAI--RGGGGGVWGIVYAWKIKLLQVPRVVSGFV 262 (551)
Q Consensus 220 ~~~~------------------~~~~-----------------dLf~a~--rG~g~g~fGiVt~~~~~l~p~p~~~~~~~ 262 (551)
++++ ..++ ||+|++ +|+ +|+||| |+++|||+|.|+....+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gs-eGtlGV-t~~tl~l~p~p~~~~~~~ 280 (571)
T 1f0x_A 203 LSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGC-AGKLAV-FAVRLDTFEAEKNQQVFY 280 (571)
T ss_dssp HHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTC-TTSSEE-EEEEEECEECCSSCEEEE
T ss_pred EEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCC-CCceeE-EEEEEEEEecCCeEEEEE
Confidence 8754 1223 888887 888 799999 999999999998776666
Q ss_pred EEcCCCHhHHHHHHHHHHH
Q 008842 263 LSRPGSKQHVAKLVNKWQH 281 (551)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~ 281 (551)
+.++ +.+++.+++..+++
T Consensus 281 ~~~~-~~~~a~~~~~~~~~ 298 (571)
T 1f0x_A 281 IGTN-QPEVLTEIRRHILA 298 (571)
T ss_dssp EEES-CHHHHHHHHHHHHH
T ss_pred EEeC-CHHHHHHHHHHHHH
Confidence 6665 67787788777764
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=1.2e-25 Score=228.56 Aligned_cols=161 Identities=20% Similarity=0.242 Sum_probs=133.8
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCceEEeCCCCEEEEecCCCHH
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKISVDLESETAWVQGGATLG 159 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~ 159 (551)
..|.+++.|+|++||+++|++|+++++|+.++|||||+.+ .+.+.++++|||++|++|++|. .+++||||++|.
T Consensus 53 g~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~----~~~~~~gvvI~l~~~~~I~~d~--~~v~v~aG~~~~ 126 (322)
T 3tx1_A 53 GAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLII----KDGGIRGVILHLDLLQTIERNN--TQIVAMSGAKLI 126 (322)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEE----CTTCEEEEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred ceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCc----CCCCCCeEEEECCCCCcEEECC--CEEEEecCcCHH
Confidence 5899999999999999999999999999999999999842 2223357999999999998864 599999999999
Q ss_pred HHHHHHHHcCC-cccccCCCCCccccccccc--cCCccccccccCccccceeeeEEEecCCcEEEccCCCchhHHHhhcC
Q 008842 160 ETYSAISEASN-THGFSAGSCPTVGVGGHIG--GGGFGLLSRKYGLAADNVVDALLMDANGRLLNREAMGEDVFWAIRGG 236 (551)
Q Consensus 160 ~l~~~l~~~g~-~~~~~~g~~~~vgvgG~~~--~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~ 236 (551)
+|++++.++|+ ++.+..|.+.+|| |.+. .||+| |.++|+|++++||++||++++.+ .+|++|++|++
T Consensus 127 ~l~~~l~~~Gl~Gle~~~giPgTVG--Gav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s 196 (322)
T 3tx1_A 127 DTAKFALNESLSGLEFACGIPGSIG--GALHMNAGAYG------GEISDVLEAATVLTQTGELKKLK--RSELKAAYRFS 196 (322)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSBHH--HHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-C
T ss_pred HHHHHHHHcCCcccccCCCCcchhH--HHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhc
Confidence 99999999985 4557778877655 5554 44433 68999999999999999999987 57999999987
Q ss_pred CCC-cceeeEEEEEeeeecCc
Q 008842 237 GGG-VWGIVYAWKIKLLQVPR 256 (551)
Q Consensus 237 g~g-~fGiVt~~~~~l~p~p~ 256 (551)
..+ .+||||+++|||+|.|+
T Consensus 197 ~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 197 TIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTTGGGCEEEEEEEECEECCH
T ss_pred ccCCCCEEEEEEEEEEEeCCH
Confidence 544 57899999999999874
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=3.1e-24 Score=220.30 Aligned_cols=163 Identities=18% Similarity=0.091 Sum_probs=141.0
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCceEEeC--CCCEEEEecCCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKISVDL--ESETAWVQGGAT 157 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~~d~--~~~~v~v~~G~~ 157 (551)
..|.+++.|+|++||+++|++|+++++|+.++|||||+. .+++ .+|+||+++ |++|+++. +..+++|++|++
T Consensus 29 g~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll----~~d~-~~GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 29 QLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNML----FTCH-YTGMIVVNR-LNGIEHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp CEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEE----ECSC-EEEEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred ccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcc----cCCC-CCeEEEEcC-CCceEEeccCCceEEEEeCCCc
Confidence 578899999999999999999999999999999999983 3222 457999998 99998764 456899999999
Q ss_pred HHHHHHHHHHcCCcccccCCCCCccccccccccCCccccccccCc-cccceeeeEEEec-CCcEEEccCCCchhHHHhhc
Q 008842 158 LGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGL-AADNVVDALLMDA-NGRLLNREAMGEDVFWAIRG 235 (551)
Q Consensus 158 ~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~-~~D~v~~~~vV~~-~G~i~~~~~~~~dLf~a~rG 235 (551)
|.+|.+++.++|+. |.++.+||+| ..||+.+++.+.||. ++|+|+++++|++ +|++++.+ +.||+|++|+
T Consensus 103 ~~~l~~~a~~~Gl~-----GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~ 174 (357)
T 3i99_A 103 WPSLVSWCVEQGIG-----GLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRD 174 (357)
T ss_dssp HHHHHHHHHHTTCT-----TCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTB
T ss_pred HHHHHHHHHHcCCc-----CccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccccc
Confidence 99999999999853 6666777777 457888899999997 8999999999998 99999987 5799999998
Q ss_pred CCC----CcceeeEEEEEeeeecCc
Q 008842 236 GGG----GVWGIVYAWKIKLLQVPR 256 (551)
Q Consensus 236 ~g~----g~fGiVt~~~~~l~p~p~ 256 (551)
+.. +++||||+++|||+|.++
T Consensus 175 s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 175 SIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCCccCCCEEEEEEEEEEEeCCc
Confidence 743 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=4e-24 Score=218.60 Aligned_cols=160 Identities=14% Similarity=0.127 Sum_probs=132.1
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCceEEeCCCCEEEEecCCCHH
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKISVDLESETAWVQGGATLG 159 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~ 159 (551)
..|.+|++|+|++||+++|++|+++++|+.++|||||+.+...+ .++++|||++||+|++|. .+++||||++|.
T Consensus 47 ~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~----~~gvvI~l~~m~~i~id~--~~v~v~aGv~~~ 120 (326)
T 1hsk_A 47 GNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGG----IRGIVISLLSLDHIEVSD--DAIIAGSGAAII 120 (326)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTC----EEEEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred CcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCC----CCeEEEEeCCCCceEEcC--CEEEEeCCCcHH
Confidence 57999999999999999999999999999999999998543322 236999999999999873 699999999999
Q ss_pred HHHHHHHHcCC-cccccCCCCCccccccccccCCccccccccC-ccccceeeeEEEecCCcEEEccCCCchhHHHhhcCC
Q 008842 160 ETYSAISEASN-THGFSAGSCPTVGVGGHIGGGGFGLLSRKYG-LAADNVVDALLMDANGRLLNREAMGEDVFWAIRGGG 237 (551)
Q Consensus 160 ~l~~~l~~~g~-~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G-~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~g 237 (551)
+|++++.++|+ ++.+.++.+. +|||.+.+++.| || .++|+|++++||++||++++++. .|++|++|...
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 99999999885 3334445444 366777665544 88 99999999999999999999873 48899999742
Q ss_pred C-CcceeeEEEEEeeeec
Q 008842 238 G-GVWGIVYAWKIKLLQV 254 (551)
Q Consensus 238 ~-g~fGiVt~~~~~l~p~ 254 (551)
. +..||||+++||++|.
T Consensus 192 l~s~ggIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEHLVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTTCEEEEEEEECEEC
T ss_pred cCCCCEEEEEEEEEEEcC
Confidence 1 1129999999999998
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.89 E-value=8.3e-23 Score=209.11 Aligned_cols=163 Identities=13% Similarity=0.031 Sum_probs=139.3
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCceE-EeCCC-CEEEEecCCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKIS-VDLES-ETAWVQGGAT 157 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i~-~d~~~-~~v~v~~G~~ 157 (551)
..|.+++.|+|++||+++|++|+++++|+.++|||||+. ..++ .+|+||+|+ |++|. ++.++ .+++||||++
T Consensus 13 g~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll----~~d~-~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~ 86 (340)
T 1uxy_A 13 HNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVL----FLED-YRGTVIINR-IKGIEIHDEPDAWYLHVGAGEN 86 (340)
T ss_dssp CBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEE----ECSC-EEEEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred ccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCc----ccCC-CCeEEEEcc-CCCcEEEecCCCeEEEEecCCC
Confidence 568999999999999999999999999999999999983 2222 457999996 99984 66666 6899999999
Q ss_pred HHHHHHHHHHcCCcccccCCCCCccccccccccCCccccccccCc-cccceeeeEEEec-CCcEEEccCCCchhHHHhhc
Q 008842 158 LGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGL-AADNVVDALLMDA-NGRLLNREAMGEDVFWAIRG 235 (551)
Q Consensus 158 ~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~-~~D~v~~~~vV~~-~G~i~~~~~~~~dLf~a~rG 235 (551)
|.+|.+++.++|+ .|.++.+||+| ..||+..++.+.||. ++|+|+++++|++ +|++++.+ ..|++|++|+
T Consensus 87 ~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~ 158 (340)
T 1uxy_A 87 WHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRD 158 (340)
T ss_dssp HHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTB
T ss_pred HHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCc
Confidence 9999999999885 25666677777 457888888999995 8999999999996 99999987 5799999998
Q ss_pred CCC----CcceeeEEEEEeeeecCc
Q 008842 236 GGG----GVWGIVYAWKIKLLQVPR 256 (551)
Q Consensus 236 ~g~----g~fGiVt~~~~~l~p~p~ 256 (551)
+.. +++||||+++||+.|.++
T Consensus 159 s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 159 SIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CccCCcCCCCEEEEEEEEEEEcCCC
Confidence 732 259999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=1.9e-22 Score=199.36 Aligned_cols=151 Identities=19% Similarity=0.201 Sum_probs=127.1
Q ss_pred CceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCe-EEEEEcCCCCceEEeCCCCEEEEecCCCHH
Q 008842 81 KPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGAS-FVILDMSNLNKISVDLESETAWVQGGATLG 159 (551)
Q Consensus 81 ~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~-~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~ 159 (551)
.|+.+++|+|++||+++| ++|+.++|+|||+. ..+++.+ ++||+|++|++|++|. +|+||++|.
T Consensus 21 g~a~vv~p~s~edv~~~v------~ipv~v~GgGsnll----~~d~~~~~GvVI~l~~~~~I~vd~-----~v~aG~~~~ 85 (268)
T 2gqt_A 21 GPAELWTVETREELKRAT------EAPYRVLGNGSNLL----VLDEGVPERVIRLAGEFQTYDLKG-----WVGAGTLLP 85 (268)
T ss_dssp CEEEEEEECSHHHHHHHT------TSCEEECSSSSSEE----ECTTCCSSEEEEECGGGGCBCTTS-----EEETTSBHH
T ss_pred cceEEEEeCCHHHHHHHh------CCCeEEcCCCcCce----ecCCCcCCeEEEEcCCCCCcEEcC-----EEECCCCHH
Confidence 344499999999999999 89999999999984 3333334 7999999999998752 999999999
Q ss_pred HHHHHHHHcCCcccccCCCCCccccccccccCCccccccccC-ccccceeeeEEEecCCcEEEccCCCchhHHHhhcCCC
Q 008842 160 ETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYG-LAADNVVDALLMDANGRLLNREAMGEDVFWAIRGGGG 238 (551)
Q Consensus 160 ~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G-~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~g~ 238 (551)
+|.+++.++|+. |.++.+||+| ..||+..++.+.|| .++|+|++++|| +||++++.+ +.|++|++|++..
T Consensus 86 ~l~~~~~~~Gl~-----Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~ 156 (268)
T 2gqt_A 86 LLVQEAARAGLS-----GLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHL 156 (268)
T ss_dssp HHHHHHHHTTEE-----SCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCC
T ss_pred HHHHHHHHcCCc-----CCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCc
Confidence 999999998842 6677777877 56888888999999 699999999999 999999987 5789999999842
Q ss_pred CcceeeEEEEEeeeecC
Q 008842 239 GVWGIVYAWKIKLLQVP 255 (551)
Q Consensus 239 g~fGiVt~~~~~l~p~p 255 (551)
..-||||+++|||+|.+
T Consensus 157 ~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 157 PPGGIVTRVRLKLKERP 173 (268)
T ss_dssp STTCEEEEEEECCEECC
T ss_pred CCCceEEEEEEEEEeCC
Confidence 22259999999999984
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.81 E-value=8.7e-20 Score=175.34 Aligned_cols=118 Identities=19% Similarity=0.218 Sum_probs=102.1
Q ss_pred eEEeCCCCEEEEecCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCCccccccccCccccceeeeEEEecCCcEE
Q 008842 141 ISVDLESETAWVQGGATLGETYSAISEASNTHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLMDANGRLL 220 (551)
Q Consensus 141 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~G~~s~~~G~~~D~v~~~~vV~~~G~i~ 220 (551)
|++|+++.+++||+|+++.+|++++.++|+.+...+|.++. +|||++.+|++| ++||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 47899999999999999999999999988544444465665 899999999998 899999 9999999999999999
Q ss_pred EccC------CCchhHHHhhcCCCCcceeeEEEEEeeeecCceEEEEEEE
Q 008842 221 NREA------MGEDVFWAIRGGGGGVWGIVYAWKIKLLQVPRVVSGFVLS 264 (551)
Q Consensus 221 ~~~~------~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~p~~~~~~~~~ 264 (551)
+++. .++||||+++|+ +|+|||||+++||++|.|+....+.+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs-~G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGS-FGLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTC-TTTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EECCccccCCCCcchHHHhccC-CCceEEEEEEEEEEEECCcccEEEEEe
Confidence 8762 348999999998 789999999999999999876665443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.07 E-value=1.3e-05 Score=79.88 Aligned_cols=154 Identities=14% Similarity=0.116 Sum_probs=99.5
Q ss_pred CceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCC-CCeEEEEEcCC---CCceEEeCCCCEEEEecCC
Q 008842 81 KPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSD-GASFVILDMSN---LNKISVDLESETAWVQGGA 156 (551)
Q Consensus 81 ~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~-g~~~vvIdl~~---l~~i~~d~~~~~v~v~~G~ 156 (551)
.|...+.|+|.+|+.++++.. +.+..+.+||++..-. . .+. ..++++||+++ |+.|+.+ ++.++||+|+
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~-~-~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~ 76 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPM-M-KLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMT 76 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHH-H-HTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTC
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHH-H-hcCCCCCCEEEECCCChhhcceEec--CCEEEEccCC
Confidence 455688999999999988753 3578999999996210 0 011 12359999985 6777764 4479999999
Q ss_pred CHHHHHH--HHHHcCC-ccc----ccCCCC--CccccccccccCCccccccccCcccccee-------eeEEEecCCcEE
Q 008842 157 TLGETYS--AISEASN-THG----FSAGSC--PTVGVGGHIGGGGFGLLSRKYGLAADNVV-------DALLMDANGRLL 220 (551)
Q Consensus 157 ~~~~l~~--~l~~~g~-~~~----~~~g~~--~~vgvgG~~~~gg~G~~s~~~G~~~D~v~-------~~~vV~~~G~i~ 220 (551)
++.+|.+ .+.+ ++ .+. ...|.. +..+|||.+..+.. ..|.+. .+++..++| ..
T Consensus 77 tl~~l~~~~~~~~-~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r 145 (287)
T 1ffv_C 77 VENDLISSPIVQA-RLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RR 145 (287)
T ss_dssp BHHHHHHCHHHHH-HCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EE
T ss_pred cHHHHhhChHHHH-HhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eE
Confidence 9999996 3433 22 111 122221 12457888876632 345544 578888898 44
Q ss_pred EccCCCchhHHHhhcCCCCcceeeEEEEEeeeec
Q 008842 221 NREAMGEDVFWAIRGGGGGVWGIVYAWKIKLLQV 254 (551)
Q Consensus 221 ~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~ 254 (551)
+.. -.|+|+.+|-.....-.|||+++|.+.+.
T Consensus 146 ~i~--~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 146 TVP--ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EEE--STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEE--HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 444 35888777643233335999999987654
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.31 E-value=0.0004 Score=69.14 Aligned_cols=156 Identities=13% Similarity=0.040 Sum_probs=92.9
Q ss_pred CceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCC---CCceEEeCCCCEEEEecCCC
Q 008842 81 KPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSN---LNKISVDLESETAWVQGGAT 157 (551)
Q Consensus 81 ~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~---l~~i~~d~~~~~v~v~~G~~ 157 (551)
.|...+.|+|.+|+.++++.. +-+..+.+||++..-. .........++||+++ |+.|+.+ ++.++||++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~-~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t 77 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPI-MKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTT 77 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHH-HHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCB
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHH-HhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCc
Confidence 455678999999999988533 3457889999995211 0000011249999987 5666664 45799999999
Q ss_pred HHHHHH--HHHHcCCcccc--c-CCCC---CccccccccccCCccccccccCcccccee-------eeEEEecCCcEEEc
Q 008842 158 LGETYS--AISEASNTHGF--S-AGSC---PTVGVGGHIGGGGFGLLSRKYGLAADNVV-------DALLMDANGRLLNR 222 (551)
Q Consensus 158 ~~~l~~--~l~~~g~~~~~--~-~g~~---~~vgvgG~~~~gg~G~~s~~~G~~~D~v~-------~~~vV~~~G~i~~~ 222 (551)
+.+|.+ .+.++-..+.- . .+.. +..+|||.+..+. ...|.+. .+++..++|+ .+.
T Consensus 78 ~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v 147 (288)
T 1n62_C 78 QHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIV 147 (288)
T ss_dssp HHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEE
T ss_pred HHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEE
Confidence 999994 44432111111 0 1111 1236788887662 2455554 5566677884 333
Q ss_pred cCCCchhHHHhhcCCCCcceeeEEEEEeeeec
Q 008842 223 EAMGEDVFWAIRGGGGGVWGIVYAWKIKLLQV 254 (551)
Q Consensus 223 ~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p~ 254 (551)
. -.|+|...+-.....--|||++.|...+.
T Consensus 148 ~--~~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 148 A--ARDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp E--HHHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred E--HHHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 2 24666555422122335899999876543
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.86 E-value=0.00078 Score=71.32 Aligned_cols=152 Identities=18% Similarity=0.137 Sum_probs=95.3
Q ss_pred EEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCC-CeEEEEEcCC---CCceEEeCCCCEEEEecCCCHH
Q 008842 84 AIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDG-ASFVILDMSN---LNKISVDLESETAWVQGGATLG 159 (551)
Q Consensus 84 ~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g-~~~vvIdl~~---l~~i~~d~~~~~v~v~~G~~~~ 159 (551)
..+.|+|.+|+.++++.. . +..+.+||++..-.- .+.. ...++||+++ |+.|+.+ ++.++||+|+++.
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~--k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~ 250 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWV--TKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIA 250 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHH--HTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhh--hccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHH
Confidence 357899999999888642 2 468899999973210 0111 1248999988 6777765 3469999999999
Q ss_pred HHHHHHHHcCCc-c----cccCCCC--CccccccccccCCccccccccCcccccee----eeEEEecCCcEEEccCCCch
Q 008842 160 ETYSAISEASNT-H----GFSAGSC--PTVGVGGHIGGGGFGLLSRKYGLAADNVV----DALLMDANGRLLNREAMGED 228 (551)
Q Consensus 160 ~l~~~l~~~g~~-~----~~~~g~~--~~vgvgG~~~~gg~G~~s~~~G~~~D~v~----~~~vV~~~G~i~~~~~~~~d 228 (551)
+|.+.+.+ .+. + ...++.. +..+|||.+..+.++ +-...-++ .+++..++|+ .+.. -.|
T Consensus 251 ~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~d 320 (462)
T 2w3s_A 251 ALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMP--LED 320 (462)
T ss_dssp HHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCB--GGG
T ss_pred HHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEE--HHH
Confidence 99987432 221 1 1112211 224688988876633 44445555 6677777873 2232 357
Q ss_pred hHHHhhcCCCCcceeeEEEEEeeee
Q 008842 229 VFWAIRGGGGGVWGIVYAWKIKLLQ 253 (551)
Q Consensus 229 Lf~a~rG~g~g~fGiVt~~~~~l~p 253 (551)
+|..+|-.....-.||+++.|...+
T Consensus 321 F~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 321 FFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp GEEETTEESCCTTCEEEEEEEESCC
T ss_pred hhcccccccCCCCcEEEEEEEecCC
Confidence 7776653322223599999987654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.15 E-value=0.017 Score=57.69 Aligned_cols=155 Identities=16% Similarity=0.123 Sum_probs=87.7
Q ss_pred CceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCC---CceEEeCCCCEEEEecCCC
Q 008842 81 KPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNL---NKISVDLESETAWVQGGAT 157 (551)
Q Consensus 81 ~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l---~~i~~d~~~~~v~v~~G~~ 157 (551)
.+...+.|+|.+|+.++++- +. ...+.+||++..-.--. .......+||++++ +.|+. +++.++||++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~-~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 81 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKF-KNQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 81 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHH-SCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhc-CCCCCCEEEECCCChhhcceEE--CCCeEEEccCCc
Confidence 46678899999999887743 22 35788999996211000 01112389999975 55555 456899999999
Q ss_pred HHHHHHHHHHc----C---C----ccc--c--cCCC--CCccccccccccCCccccccccCccccce---e----eeEEE
Q 008842 158 LGETYSAISEA----S---N----THG--F--SAGS--CPTVGVGGHIGGGGFGLLSRKYGLAADNV---V----DALLM 213 (551)
Q Consensus 158 ~~~l~~~l~~~----g---~----~~~--~--~~g~--~~~vgvgG~~~~gg~G~~s~~~G~~~D~v---~----~~~vV 213 (551)
+.++.+.+.++ . . .+. + .++. -+..+|||.+..+.. ..|.. + .+++.
T Consensus 82 ~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p---------~sD~~~~L~AldA~v~l~ 152 (305)
T 3nvz_B 82 LSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP---------ISDLNPVFMASGTKLTIV 152 (305)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT---------TCSSHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC---------chHHHHHHHHcCCEEEEE
Confidence 99998876421 0 0 000 1 1111 023467888876542 23332 2 45666
Q ss_pred ecCCcEEEccCCCchhHHHhhcCCCCcceeeEEEEEeeee
Q 008842 214 DANGRLLNREAMGEDVFWAIRGGGGGVWGIVYAWKIKLLQ 253 (551)
Q Consensus 214 ~~~G~i~~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~p 253 (551)
.++|+ .+.. -..|+|-+.+--....--|||++.+...+
T Consensus 153 ~~~G~-R~vp-~~~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 153 SRGTR-RTVP-MDHTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp ETTEE-EEEE-CCGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred cCCCc-EEEE-eehHhhcCcccccCCCCcEEEEEEecCCC
Confidence 67774 2222 11255544432212222499999886433
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=95.97 E-value=0.012 Score=58.37 Aligned_cols=150 Identities=12% Similarity=0.083 Sum_probs=87.6
Q ss_pred CceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCC---CccccCCCCeEEEEEcCCC---CceEEeCCCCEEEEec
Q 008842 81 KPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEG---TSSFSSDGASFVILDMSNL---NKISVDLESETAWVQG 154 (551)
Q Consensus 81 ~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g---~~~~~~~g~~~vvIdl~~l---~~i~~d~~~~~v~v~~ 154 (551)
.|...+.|+|.+|+.++++- +-...+.+||+++.- .... . ...+||++++ +.|+. +++.++||+
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~--~--~~~lIdl~~i~eL~~I~~--~~~~l~IGA 73 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLV--Y--PSCLVDLRNVSELFEISQ--SAGILSVGA 73 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCC--C--CSEEEECTTCGGGGCEEE--ETTEEEEET
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCC--C--CCEEEECCCChhhcCeEE--cCCEEEEcC
Confidence 45567899999999988853 223677899999521 1111 1 1389999985 56665 456799999
Q ss_pred CCCHHHHHH--HHHHcCCccc--cc-CCCC---CccccccccccCCccccccccCcccccee-------eeEEEecCCcE
Q 008842 155 GATLGETYS--AISEASNTHG--FS-AGSC---PTVGVGGHIGGGGFGLLSRKYGLAADNVV-------DALLMDANGRL 219 (551)
Q Consensus 155 G~~~~~l~~--~l~~~g~~~~--~~-~g~~---~~vgvgG~~~~gg~G~~s~~~G~~~D~v~-------~~~vV~~~G~i 219 (551)
++++.+|.+ .+.++-..+. +. .|.. +..++||.+..+- ...|... .+++..++|+
T Consensus 74 ~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~- 143 (288)
T 1t3q_C 74 MVTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGV- 143 (288)
T ss_dssp TCBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEE-
T ss_pred CCcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCce-
Confidence 999999986 3433211111 00 1111 2236788886542 1456654 5666667774
Q ss_pred EEccCCCchhHHHhhcCCCCcceeeEEEEEeee
Q 008842 220 LNREAMGEDVFWAIRGGGGGVWGIVYAWKIKLL 252 (551)
Q Consensus 220 ~~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~l~ 252 (551)
.+.. -.|+|...+--....--|||++.+...
T Consensus 144 R~vp--~~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 144 RSVS--ATDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp EEEE--HHHHEEETTEESCCTTCEEEEEEEECC
T ss_pred EEEE--HHHHhcCcccccCCCCCEEEEEEecCC
Confidence 2222 135554332111222358999988643
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=90.86 E-value=0.53 Score=46.56 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=51.2
Q ss_pred ceEEEeeCCHHHHHHHHHHHHhCCC-eEEEEcCCCCCCCC-ccccCCCCeEEEEEcCCC---CceEEeCCCCEEEEecCC
Q 008842 82 PVAIILPESIDQLANSVLCCRNESM-ELRVRCGGHSYEGT-SSFSSDGASFVILDMSNL---NKISVDLESETAWVQGGA 156 (551)
Q Consensus 82 P~~vv~p~s~~dv~~~v~~a~~~~~-~~~vrggGhs~~g~-~~~~~~g~~~vvIdl~~l---~~i~~d~~~~~v~v~~G~ 156 (551)
|-..+.|+|.+|..++++ +++- ...+.+||+++.-. -.. .-....+||++++ +.|+. +++.++||+++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~--~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~v 75 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDR--WEKPDVVIDIKKLKELEYIRV--EENTIHIGALS 75 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTT--SCCCSEEEECTTCGGGCCEEE--CSSEEEEETTC
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcC--CCCCCeEEEcccChhhcceEE--cCCeEEEccCC
Confidence 445788999999887763 3332 46778999996211 000 0012389999986 45554 45689999999
Q ss_pred CHHHHHH
Q 008842 157 TLGETYS 163 (551)
Q Consensus 157 ~~~~l~~ 163 (551)
++.+|.+
T Consensus 76 t~~~l~~ 82 (296)
T 3hrd_C 76 TFTQIEN 82 (296)
T ss_dssp BHHHHHH
T ss_pred cHHHHHh
Confidence 9999974
No 35
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=88.90 E-value=0.2 Score=54.24 Aligned_cols=23 Identities=30% Similarity=0.515 Sum_probs=21.7
Q ss_pred ccHHHHHHHHhhcCCCCcccCCC
Q 008842 513 KNYDRLVKAKTIIDPNNIFSNQQ 535 (551)
Q Consensus 513 ~n~~RL~~IK~kyDP~~vF~~~q 535 (551)
+++++++++++++||+++|.+++
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999999999875
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=86.43 E-value=1.1 Score=44.94 Aligned_cols=74 Identities=15% Similarity=0.132 Sum_probs=52.1
Q ss_pred CceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCC---CccccCCCCeEEEEEcCCC---CceEEeCCCCEEEEec
Q 008842 81 KPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEG---TSSFSSDGASFVILDMSNL---NKISVDLESETAWVQG 154 (551)
Q Consensus 81 ~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g---~~~~~~~g~~~vvIdl~~l---~~i~~d~~~~~v~v~~ 154 (551)
.|-..+.|+|.+|..++++ +. .-.+..||+++.- .... . ...+||++++ +.|+.++ ++.++||+
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~~--~a~~lAGGT~l~~~~k~~~~--~--p~~lIdi~~i~eL~~I~~~~-~~~l~IGA 74 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---AE--ATLPLGAGTDLLPNLRRGLG--H--PAALVDLTGIDGLATISTLA-DGSLRIGA 74 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---ST--TEEEESSCTTHHHHHHTTSC--C--CSEEEECTTSTTTTCEEECT-TSCEEEET
T ss_pred CceEEEccCCHHHHHHHHh---CC--CCEEEECchhHHHHHhccCC--C--CCEEEECCCChhhcceEECC-CCeEEEcc
Confidence 3445789999999988875 22 4678899999621 1111 1 2389999886 5666543 34699999
Q ss_pred CCCHHHHHHH
Q 008842 155 GATLGETYSA 164 (551)
Q Consensus 155 G~~~~~l~~~ 164 (551)
++++.+|.+.
T Consensus 75 ~vt~~~l~~~ 84 (324)
T 1rm6_B 75 GATLEAIAEH 84 (324)
T ss_dssp TCBHHHHHHC
T ss_pred CCcHHHHHhC
Confidence 9999999863
No 37
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=82.05 E-value=1.7 Score=46.44 Aligned_cols=30 Identities=20% Similarity=0.169 Sum_probs=23.0
Q ss_pred Hhhhhhccc-HHHHHHHHhhcCCCCcccCCC
Q 008842 506 WGEKYFLKN-YDRLVKAKTIIDPNNIFSNQQ 535 (551)
Q Consensus 506 ~~~~Y~G~n-~~RL~~IK~kyDP~~vF~~~q 535 (551)
|...+||++ ++-+++||+.+||+|+|+---
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGk 511 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGR 511 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 446777765 455699999999999997543
No 38
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=64.53 E-value=5.9 Score=47.13 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=53.0
Q ss_pred CceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCC---CceEEeCCCCEEEEecCCC
Q 008842 81 KPVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNL---NKISVDLESETAWVQGGAT 157 (551)
Q Consensus 81 ~P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l---~~i~~d~~~~~v~v~~G~~ 157 (551)
.+...++|.|.+|+.++++-. . .-.+.+||++..-.--. ..-...++||++++ +.|+. +++.++||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~--~--~a~lvaGgT~l~~~~k~-~~~~~~~lIdl~~i~EL~~I~~--~~~~l~IGA~vt 304 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQH--P--EAKLVVGNTEIGIEMKF-KNQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 304 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHC--T--TCEECSSCTTHHHHHHH-SCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHhhC--C--CCEEEEeCcHHHHHhhc-CCCCCCeEEEcCCCHHhCceEE--eCCEEEEEecCh
Confidence 455688999999998876432 1 24677999985211000 00011389999985 45555 456799999999
Q ss_pred HHHHHHHHH
Q 008842 158 LGETYSAIS 166 (551)
Q Consensus 158 ~~~l~~~l~ 166 (551)
+.+|.+.+.
T Consensus 305 l~~l~~~l~ 313 (1332)
T 3unc_A 305 LSSVEKTLL 313 (1332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988664
No 39
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=59.80 E-value=5.9 Score=42.66 Aligned_cols=24 Identities=21% Similarity=0.200 Sum_probs=20.0
Q ss_pred ccHHHHHHHHhhcCCCCcccCCCC
Q 008842 513 KNYDRLVKAKTIIDPNNIFSNQQG 536 (551)
Q Consensus 513 ~n~~RL~~IK~kyDP~~vF~~~qs 536 (551)
..++-+++||+.+||+|+|+--.-
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~ 546 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKS 546 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGG
T ss_pred HHHHHHHHHHHHcCccCCCCCCcc
Confidence 468889999999999999975443
No 40
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=50.33 E-value=7.3 Score=41.01 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=23.7
Q ss_pred HHHhhhhhc-ccHHHHHHHHhhcCCCCccc
Q 008842 504 RVWGEKYFL-KNYDRLVKAKTIIDPNNIFS 532 (551)
Q Consensus 504 ~~~~~~Y~G-~n~~RL~~IK~kyDP~~vF~ 532 (551)
+.|-+..|| +.++-+++||+.+||+|+++
T Consensus 442 ~~~l~~~~~~~~~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 442 RDELAEVKDKTAIELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHCTTSCBS
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 345556666 57999999999999999996
No 41
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=34.88 E-value=19 Score=38.71 Aligned_cols=27 Identities=22% Similarity=0.101 Sum_probs=20.5
Q ss_pred cccHHHHHHHHhhcCCCCcccCCCCCCC
Q 008842 512 LKNYDRLVKAKTIIDPNNIFSNQQGIPP 539 (551)
Q Consensus 512 G~n~~RL~~IK~kyDP~~vF~~~qsI~~ 539 (551)
+.... |++||+.+||+|+|+---.+.|
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 34444 9999999999999986555544
No 42
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=31.24 E-value=18 Score=39.05 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=18.6
Q ss_pred hhhhc-ccHHHHHHHHhhcCCCCcccC
Q 008842 508 EKYFL-KNYDRLVKAKTIIDPNNIFSN 533 (551)
Q Consensus 508 ~~Y~G-~n~~RL~~IK~kyDP~~vF~~ 533 (551)
...+| ..++-+++||+.+||+|+|+-
T Consensus 554 ~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 554 TRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -----CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 34444 468999999999999999963
No 43
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=27.54 E-value=35 Score=40.69 Aligned_cols=79 Identities=14% Similarity=0.139 Sum_probs=48.9
Q ss_pred EEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCce-EEeCCCCEEEEecCCCHHHHH
Q 008842 84 AIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNKI-SVDLESETAWVQGGATLGETY 162 (551)
Q Consensus 84 ~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~i-~~d~~~~~v~v~~G~~~~~l~ 162 (551)
.-+.|.|.+|+.++..- .-+.+ +..|++...=. ....+-...++|++.+..++ .+..++..++||+++++.++.
T Consensus 242 ~w~~P~tl~el~~l~~~--~p~a~--lvaGnT~~gl~-~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMK--HPSAP--LVIGNTYLGLH-MKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp EEEECSSHHHHHHHHHH--CTTSC--BCSSCTTHHHH-HC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred eEecCCCHHHHHHHHHH--CCCCe--EEEecccceee-EeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 35789999999887532 22333 34566663100 00001111389998875544 344556689999999999998
Q ss_pred HHHHH
Q 008842 163 SAISE 167 (551)
Q Consensus 163 ~~l~~ 167 (551)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 44
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=26.06 E-value=1.1e+02 Score=25.37 Aligned_cols=36 Identities=14% Similarity=0.078 Sum_probs=31.0
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeE-EEEcCCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMEL-RVRCGGH 115 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~-~vrggGh 115 (551)
..|..|+...+++|+.++.+-|++.|++. .++-.|+
T Consensus 54 g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 54 GQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 58999999999999999999999999986 4555665
No 45
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=25.93 E-value=1.2e+02 Score=25.22 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=31.2
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeE-EEEcCCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMEL-RVRCGGH 115 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~-~vrggGh 115 (551)
..|..|+.+.+++|+.++.+-|++.|++. .++-.|+
T Consensus 53 g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 53 GQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 58999999999999999999999999986 4555665
No 46
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=22.12 E-value=1.2e+02 Score=24.95 Aligned_cols=37 Identities=8% Similarity=0.066 Sum_probs=31.1
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMEL-RVRCGGHS 116 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~-~vrggGhs 116 (551)
..|..|+.+.+++++.++.+-|++.|++. .++-.|+.
T Consensus 50 g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 50 GQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 68999999999999999999999999986 45555553
No 47
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=21.77 E-value=1.2e+02 Score=24.94 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=29.3
Q ss_pred CCceEEEeeCCHHHHHHHHHHHHhCCCeE-EEEcCCC
Q 008842 80 PKPVAIILPESIDQLANSVLCCRNESMEL-RVRCGGH 115 (551)
Q Consensus 80 ~~P~~vv~p~s~~dv~~~v~~a~~~~~~~-~vrggGh 115 (551)
..|..|+...+++|+.++.+-|++.|++. .++-.|+
T Consensus 48 g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 48 GQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 68999999999999999999999999875 3444443
No 48
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.93 E-value=1.8e+02 Score=22.55 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=23.4
Q ss_pred ceEEeCCCCEEEEecCCCHHHHHHHHHHcCCc
Q 008842 140 KISVDLESETAWVQGGATLGETYSAISEASNT 171 (551)
Q Consensus 140 ~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~ 171 (551)
.+++|...+.++|..-+...+|.+.+...|+.
T Consensus 48 ~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~ 79 (98)
T 2crl_A 48 DVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQ 79 (98)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTTSC
T ss_pred EEEEECCCCEEEEEEeCCHHHHHHHHHHhCCc
Confidence 34566667777777667888999999887754
No 49
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=20.31 E-value=1.1e+02 Score=23.91 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=27.6
Q ss_pred ceEEEeeCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCccccCCCCeEEEEEcCCCCc
Q 008842 82 PVAIILPESIDQLANSVLCCRNESMELRVRCGGHSYEGTSSFSSDGASFVILDMSNLNK 140 (551)
Q Consensus 82 P~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGhs~~g~~~~~~~g~~~vvIdl~~l~~ 140 (551)
-..++.|++-+|+++++...++.. .|+|||..|+.
T Consensus 6 ~Ivv~~P~sy~Da~~I~d~Lr~~~------------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 6 TIVPVELHSFEDAQVIGGAFRDGD------------------------AVVFDMSLLSR 40 (87)
T ss_dssp SCEEEECSSGGGHHHHHHHHHTTC------------------------CEEEECTTSCH
T ss_pred EEEEEecCcHHHHHHHHHHHHCCC------------------------EEEEECCCCCH
Confidence 456899999999999998876532 28899888764
Done!