Your job contains 1 sequence.
>008844
MNAPIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKE
LRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGS
STPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC
FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI
RIYDNLLPLKNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALFREFQDSITKMHWKAPCF
SGDGEWVIAGSASKGEHKIYIWDRAGYLVKILEGPKEALIDLAWHPVHPIIVSVSLTGWV
YIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLNTETEKVKESNVNEDEEVDIVAVD
KDAFSDSDMSQEELCFLPAIPCPDVPERQGKCVGSSSKLMDRNHSGSPLSEEAMQNGQAA
NHASSPLEEDTGGTRLKRKRKPSEKGLELQAEKVRKPLKSSGRSSKVKSKSMADQDMSNG
VYGDDISDEYQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008844
(551 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092930 - symbol:RBL "AT3G21060" species:3702 ... 1970 1.3e-203 1
DICTYBASE|DDB_G0285847 - symbol:rbbE "putative Retinoblas... 338 9.2e-62 3
FB|FBgn0036973 - symbol:Rbbp5 species:7227 "Drosophila me... 337 1.7e-61 3
MGI|MGI:1918367 - symbol:Rbbp5 "retinoblastoma binding pr... 357 1.2e-54 2
UNIPROTKB|A4FUE3 - symbol:RBBP5 "RBBP5 protein" species:9... 355 2.2e-54 2
UNIPROTKB|Q15291 - symbol:RBBP5 "Retinoblastoma-binding p... 355 2.2e-54 2
UNIPROTKB|F1NSH5 - symbol:RBBP5 "Uncharacterized protein"... 354 2.5e-54 2
RGD|1305532 - symbol:Rbbp5 "retinoblastoma binding protei... 354 3.4e-54 2
UNIPROTKB|F1S359 - symbol:RBBP5 "Uncharacterized protein"... 355 3.3e-53 2
POMBASE|SPAC23H3.05c - symbol:swd1 "Set1C complex subunit... 280 2.1e-46 2
UNIPROTKB|G4MT88 - symbol:MGG_04651 "SET1 complex compone... 269 5.5e-40 2
WB|WBGene00017683 - symbol:rbbp-5 species:6239 "Caenorhab... 252 1.1e-35 2
CGD|CAL0004413 - symbol:SWD1 species:5476 "Candida albica... 347 2.0e-31 1
SGD|S000000064 - symbol:SWD1 "Subunit of the COMPASS (Set... 204 3.7e-30 2
ASPGD|ASPL0000062656 - symbol:AN0808 species:162425 "Emer... 302 1.7e-24 1
FB|FBgn0036972 - symbol:CG6434 species:7227 "Drosophila m... 145 8.0e-20 2
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 94 1.0e-09 3
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 114 1.6e-09 3
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 93 2.9e-09 3
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 92 5.4e-09 3
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 91 7.0e-09 3
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 90 9.2e-09 3
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 90 9.2e-09 3
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 90 9.2e-09 3
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 130 1.1e-08 3
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 100 1.2e-08 3
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 89 3.2e-08 3
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 114 5.1e-08 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 102 1.8e-07 3
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 84 1.8e-07 3
UNIPROTKB|A8XEN7 - symbol:wdr-23 "DDB1- and CUL4-associat... 114 3.1e-07 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 111 5.8e-07 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 96 7.9e-07 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 111 9.3e-07 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 109 2.0e-06 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 103 2.3e-06 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 127 2.6e-06 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 127 2.6e-06 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 101 2.7e-06 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 108 4.0e-06 2
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 84 4.3e-06 3
UNIPROTKB|Q2TBM8 - symbol:WDR26 "WD repeat domain 26" spe... 100 5.2e-06 2
UNIPROTKB|F1PIR1 - symbol:WDR26 "Uncharacterized protein"... 100 5.2e-06 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 120 5.7e-06 2
UNIPROTKB|F1SGL8 - symbol:DCAF11 "Uncharacterized protein... 125 6.9e-06 2
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 105 8.2e-06 2
GENEDB_PFALCIPARUM|PFL0970w - symbol:PFL0970w "pre-mRNA s... 116 8.5e-06 2
UNIPROTKB|Q8I5L1 - symbol:PFL0970w "Pre-mRNA splicing fac... 116 8.5e-06 2
TAIR|locus:2139335 - symbol:AT4G03020 "AT4G03020" species... 103 9.0e-06 2
TAIR|locus:2157762 - symbol:AT5G50230 "AT5G50230" species... 91 9.0e-06 3
TAIR|locus:2135393 - symbol:AT4G04940 "AT4G04940" species... 87 9.1e-06 3
UNIPROTKB|F1S8S6 - symbol:WDR26 "Uncharacterized protein"... 100 9.7e-06 2
UNIPROTKB|Q9H7D7 - symbol:WDR26 "WD repeat-containing pro... 100 9.7e-06 2
UNIPROTKB|F1P3E7 - symbol:WDR26 "Uncharacterized protein"... 101 1.0e-05 2
RGD|1565589 - symbol:Wdr26 "WD repeat domain 26" species:... 100 1.1e-05 2
ZFIN|ZDB-GENE-041014-277 - symbol:wdr26b "WD repeat domai... 100 1.4e-05 2
RGD|1311288 - symbol:Dcaf11 "DDB1 and CUL4 associated fac... 124 1.4e-05 2
MGI|MGI:1923825 - symbol:Wdr26 "WD repeat domain 26" spec... 100 1.4e-05 2
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 87 1.5e-05 3
FB|FBgn0034646 - symbol:Rae1 "Rae1" species:7227 "Drosoph... 107 1.7e-05 2
MGI|MGI:90168 - symbol:Dcaf11 "DDB1 and CUL4 associated f... 123 3.2e-05 3
UNIPROTKB|Q5R7H5 - symbol:DCAF11 "DDB1- and CUL4-associat... 120 3.8e-05 2
UNIPROTKB|Q8TEB1 - symbol:DCAF11 "DDB1- and CUL4-associat... 120 3.8e-05 2
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 130 5.4e-05 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 125 6.1e-05 1
UNIPROTKB|F1MVT2 - symbol:DCAF11 "DDB1- and CUL4-associat... 118 6.3e-05 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 125 7.3e-05 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 125 7.3e-05 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 125 7.3e-05 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 125 7.3e-05 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 125 7.3e-05 1
UNIPROTKB|E1C9D6 - symbol:GNB3 "Uncharacterized protein" ... 94 7.6e-05 2
TAIR|locus:2159697 - symbol:AT5G50550 "AT5G50550" species... 100 7.7e-05 2
TAIR|locus:2832497 - symbol:AT5G50650 "AT5G50650" species... 100 7.7e-05 2
UNIPROTKB|Q5E9I8 - symbol:DCAF11 "DDB1- and CUL4-associat... 117 8.1e-05 2
RGD|1307063 - symbol:Cdc40 "cell division cycle 40" speci... 89 8.7e-05 2
UNIPROTKB|F1LMQ0 - symbol:Cdc40 "Protein Cdc40" species:1... 89 8.9e-05 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 124 9.4e-05 1
TAIR|locus:2161840 - symbol:TEX1 "AT5G56130" species:3702... 124 9.7e-05 2
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 89 0.00011 2
POMBASE|SPAC343.04c - symbol:SPAC343.04c "WD repeat prote... 88 0.00011 3
ZFIN|ZDB-GENE-050809-116 - symbol:dcaf11 "ddb1 and cul4 a... 107 0.00014 2
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 89 0.00014 2
WB|WBGene00008419 - symbol:wdr-23 species:6239 "Caenorhab... 96 0.00015 2
UNIPROTKB|P90794 - symbol:wdr-23 "DDB1- and CUL4-associat... 96 0.00015 2
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 93 0.00016 2
DICTYBASE|DDB_G0269686 - symbol:DDB_G0269686 "WD40 repeat... 98 0.00017 2
FB|FBgn0037094 - symbol:CG7611 species:7227 "Drosophila m... 87 0.00017 2
UNIPROTKB|F1MBS9 - symbol:CDC40 "Uncharacterized protein"... 89 0.00017 2
UNIPROTKB|O60508 - symbol:CDC40 "Pre-mRNA-processing fact... 89 0.00017 2
UNIPROTKB|F1RSY9 - symbol:CDC40 "Uncharacterized protein"... 89 0.00017 2
MGI|MGI:1918963 - symbol:Cdc40 "cell division cycle 40" s... 89 0.00017 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 123 0.00018 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 123 0.00019 1
SGD|S000002772 - symbol:CDC40 "Pre-mRNA splicing factor" ... 85 0.00020 2
UNIPROTKB|E2RSW2 - symbol:CDC40 "Uncharacterized protein"... 89 0.00024 2
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 101 0.00027 2
TAIR|locus:2096489 - symbol:AT3G42660 "AT3G42660" species... 125 0.00035 1
DICTYBASE|DDB_G0276031 - symbol:DDB_G0276031 "WD40 repeat... 73 0.00038 4
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 84 0.00040 2
WARNING: Descriptions of 10 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2092930 [details] [associations]
symbol:RBL "AT3G21060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=IMP]
[GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0010228 GO:GO:0048188 KO:K14961
HOGENOM:HOG000204856 OMA:VNRLQWN UniGene:At.5579 UniGene:At.72877
EMBL:BT021105 IPI:IPI00538883 RefSeq:NP_188743.3
ProteinModelPortal:Q5E915 SMR:Q5E915 PRIDE:Q5E915
EnsemblPlants:AT3G21060.1 GeneID:821658 KEGG:ath:AT3G21060
TAIR:At3g21060 InParanoid:Q5E915 PhylomeDB:Q5E915
ProtClustDB:CLSN2680851 Genevestigator:Q5E915 Uniprot:Q5E915
Length = 547
Score = 1970 (698.5 bits), Expect = 1.3e-203, P = 1.3e-203
Identities = 385/551 (69%), Positives = 435/551 (78%)
Query: 1 MNAPIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
MNAPIIDPLQGDFPEVIEEYLEHGV+KC+AFN RG+LLAAGC+DG CVIWDFETRGIAKE
Sbjct: 1 MNAPIIDPLQGDFPEVIEEYLEHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKE 60
Query: 61 LRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGS 120
+RD +C AAITSV WSKYGHR+LVSAADKSLTLWDV GEKI R +LQQTPLQARL+PG
Sbjct: 61 IRDNDCSAAITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIARTILQQTPLQARLNPGL 120
Query: 121 STPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC 180
S+PSLCLACPLSSAPMIVD T++LP++VP++ + +AP R+K + PPF+P AAC
Sbjct: 121 SSPSLCLACPLSSAPMIVDFDIDCTTLLPVSVPEMPDVLAPPQRSKCPESNPPFSPAAAC 180
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FNK GDLVY+GNSKGEIL++D+KS ++ ALV SGAA +KNIVFSRNGQYLLTNS+DRTI
Sbjct: 181 FNKCGDLVYIGNSKGEILIVDYKSVRVLALVSASGAAPVKNIVFSRNGQYLLTNSHDRTI 240
Query: 241 RIYDNLLPLKNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALFREFQDSITKMHWKAPCF 300
RIY+NLLP KN L++L D+ K I +GIEKMK VGSKCL LFREFQDS+TKMHWKAPCF
Sbjct: 241 RIYENLLPAKNVLKSLEDLGKNIDGLDGIEKMKTVGSKCLTLFREFQDSVTKMHWKAPCF 300
Query: 301 SGDGEWVIAGSASKGEHKIYIWDRAGYLVKILEGPKEALIDLAWHPVHPIIVSVSLTGWV 360
SGDGEWV+ GSA KGEHKIYIWDRAG+LVKILEGPKEALIDLAWHPVHPIIVSVSL G V
Sbjct: 301 SGDGEWVVGGSACKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVHPIIVSVSLAGLV 360
Query: 361 YIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETEKVKESNVNEDEEVDIVAVD 420
YIWAKDYTENWSAFAPDFK FDL ETEKVK +VNEDEEVDI V+
Sbjct: 361 YIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKVLDVNEDEEVDIDTVE 420
Query: 421 KDAFSDSDMSQEELCFLPAIPCPDVPERQGKCVGSSSKLMDRNHSGSPLSEEAMQNGQAA 480
KDAFSDSDMS EEL +LPA P PD ++Q V S KL++ S SP SEEA QNG
Sbjct: 421 KDAFSDSDMSVEELRYLPAEPIPDTNDQQDNLV-ESIKLIEGQISASPASEEAGQNG--- 476
Query: 481 NHASSPLEEDTGGTRLKRKRKPSEKGLELQAEKVRKPLXXXXXXXXXXXXXMADQDMSNG 540
+HASSP E+ G TR KRKRKPSEK +ELQAEK KPL DQ+ +
Sbjct: 477 HHASSPQAEEMGETRGKRKRKPSEKAMELQAEKA-KPLKGSGKTVRAKNRAAFDQETDDS 535
Query: 541 VYG-DDISDEY 550
+ G DD D Y
Sbjct: 536 INGGDDDDDAY 546
>DICTYBASE|DDB_G0285847 [details] [associations]
symbol:rbbE "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0285847 GO:GO:0005634
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000082 KO:K14961
OMA:VNRLQWN RefSeq:XP_638014.1 ProteinModelPortal:Q54MH6
STRING:Q54MH6 EnsemblProtists:DDB0191415 GeneID:8625365
KEGG:ddi:DDB_G0285847 InParanoid:Q54MH6 ProtClustDB:CLSZ2728907
Uniprot:Q54MH6
Length = 525
Score = 338 (124.0 bits), Expect = 9.2e-62, Sum P(3) = 9.2e-62
Identities = 59/131 (45%), Positives = 80/131 (61%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKILEGPKEALIDLA 343
RE+QDS+ +MHWK CFS + E+V+ G K H I+IW +G LVK LEGPKE L+D+
Sbjct: 263 REYQDSVNRMHWKKCCFSSNNEYVVGGMNHKSIHSIFIWSVSGSLVKDLEGPKEGLVDVV 322
Query: 344 WHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETEKV 403
WHP+ PIIVS+S TG +Y+W + ENWS+FAPDF+ FD +
Sbjct: 323 WHPLRPIIVSISFTGVIYVWTAYFEENWSSFAPDFQELEENLDYVEDEDEFDAKDSDNEN 382
Query: 404 KESNVNEDEEV 414
+E N N + +
Sbjct: 383 QEVNNNNNNNI 393
Score = 330 (121.2 bits), Expect = 9.2e-62, Sum P(3) = 9.2e-62
Identities = 84/258 (32%), Positives = 136/258 (52%)
Query: 1 MNAPIIDPL-QGDFPEVIEEYL---EHGVMKCIAFNRRGTLLAAGCSD--GSCVIWDFET 54
MN +IDP Q D PE +E YL ++ C +FNRRGTLLA GC+ G ++WDF+T
Sbjct: 1 MNLCLIDPFKQSDVPETVEYYLVDPKNIKSNCASFNRRGTLLAVGCASPIGKILVWDFDT 60
Query: 55 RGIAKELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQA 114
+ I + L + S+ WS+ G ++L ++ D SL LWD+ + + + L+ L A
Sbjct: 61 KKIVRTLYHH--TGCVNSISWSRNGKKLLTASNDGSLVLWDLATSKILYSLELESPILFA 118
Query: 115 RLHPGSSTPSLCL-ACPLSSAPMIVDLSTGSTSILPIAV--------PDVANGIAPSSRN 165
HP ++ LCL + P++++ + + L I + + G+ P+S N
Sbjct: 119 EFHPRNN--DLCLIVLQKGTDPILLNFKSSEKTPLNIKSLVTSYIKREENSTGVIPTSVN 176
Query: 166 KYSDGTPPFTPTAACFNKYGDLVYVGNSKGEILVIDHKSNQI-RALVPVSGAAVIKNIVF 224
+G F A FN+ G+ ++ G+S G I V+D KS I R S +K I F
Sbjct: 177 SNYNGVATF----ASFNRRGEKIFFGDSCGMISVLDFKSMTIDRQFKVASSNTTVKQIEF 232
Query: 225 SRNGQYLLTNSNDRTIRI 242
SRN +++L +S+D+ +R+
Sbjct: 233 SRNHRFMLVSSSDKVLRL 250
Score = 98 (39.6 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 179 ACFNKYGDLVYVGNSK--GEILVIDHKSNQI-RALVPVSGAAVIKNIVFSRNGQYLLTNS 235
A FN+ G L+ VG + G+ILV D + +I R L +G + +I +SRNG+ LLT S
Sbjct: 33 ASFNRRGTLLAVGCASPIGKILVWDFDTKKIVRTLYHHTGC--VNSISWSRNGKKLLTAS 90
Query: 236 NDRTIRIYD 244
ND ++ ++D
Sbjct: 91 NDGSLVLWD 99
Score = 53 (23.7 bits), Expect = 9.2e-62, Sum P(3) = 9.2e-62
Identities = 28/121 (23%), Positives = 46/121 (38%)
Query: 396 LNTETEKVKESNVNEDEEVDIVAVDKDAFSDSDMSQEELCFLPAIPCPDVPERQGKCVGS 455
+ T+ E + + N E+E VD+ D+ SD ++ CF AI D K
Sbjct: 401 IKTQQE-LNDKNSEEEEFVDVDHNDRITEFSSDEEEDLFCF-SAID--DRYVSNVKFDDP 456
Query: 456 SSKLMDRNHSGSPLSEEAMQNGQAANHAS-SPLEEDTGGTRLKRKRKPSEKGLELQAEKV 514
L ++ S N ++ +S SP T T ++K + E +K
Sbjct: 457 RHPLYEKYQKDKEDSSSTTSNSTISSSSSPSPSSSSTTTTTTTSQKKDETQKKEKSTKKE 516
Query: 515 R 515
R
Sbjct: 517 R 517
>FB|FBgn0036973 [details] [associations]
symbol:Rbbp5 species:7227 "Drosophila melanogaster"
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0044666
"MLL3/4 complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0048188 GO:GO:0051568
HSSP:P16649 GO:GO:0044666 KO:K14961 OMA:YPEEFDG
GeneTree:ENSGT00530000064100 EMBL:AY071120 EMBL:BT032759
RefSeq:NP_649209.1 UniGene:Dm.6107 SMR:Q9VPH8 MINT:MINT-833391
STRING:Q9VPH8 EnsemblMetazoa:FBtr0078242 GeneID:40239
KEGG:dme:Dmel_CG5585 UCSC:CG5585-RA FlyBase:FBgn0036973
InParanoid:Q9VPH8 OrthoDB:EOG4V9S5V GenomeRNAi:40239 NextBio:817732
Uniprot:Q9VPH8
Length = 489
Score = 337 (123.7 bits), Expect = 1.7e-61, Sum P(3) = 1.7e-61
Identities = 78/173 (45%), Positives = 103/173 (59%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPK-EALID 341
++ QD + K WK CFSGDGE++ AGSA +H +YIW+++ G LVKIL G K E L+D
Sbjct: 242 QKLQDLVNKTTWKKCCFSGDGEYICAGSAR--QHALYIWEKSIGNLVKILHGTKGELLLD 299
Query: 342 LAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETE 401
+ WHPV PII S+S +G V IWA++ ENWSAFAPDFK FD+ E +
Sbjct: 300 VVWHPVRPIIASIS-SGLVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIADEDK 358
Query: 402 KVK-ESNVNEDEE--VDIVAVDK-DAFSDSDMSQEE---LCFLPAIPCPDVPE 447
V ++ +DEE VD+ V+ AF SD E+ L FLP P + PE
Sbjct: 359 SVDLNADAQQDEEIEVDVQKVEPVAAFCSSDEEGEDENALQFLPMAPEVEDPE 411
Score = 228 (85.3 bits), Expect = 1.7e-61, Sum P(3) = 1.7e-61
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 1 MNAPIIDPLQGDFPEVIEEYLEH-GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK 59
MN +++ ++PE + L+ + AFN+ GTLLA GC+DG VIWDF TRGIAK
Sbjct: 1 MNLELLESFGQNYPEEFDGSLDCISLAVTCAFNKYGTLLAVGCNDGRIVIWDFLTRGIAK 60
Query: 60 ELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPG 119
+ V + S+ W++ GH++L ++ D ++ +WDVL GE + L+ + P
Sbjct: 61 IISAH--VHPVCSLSWTRNGHKLLSASTDNNVCIWDVLTGELEHKYRFPSPVLKVQFDPR 118
Query: 120 SSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSR 164
+ + L CP+ A ++V++ G+ LP+ N +A R
Sbjct: 119 ND--NRLLVCPMRYAAVLVEVG-GTHRCLPLDSDGDLNIVASFDR 160
Score = 145 (56.1 bits), Expect = 1.7e-61, Sum P(3) = 1.7e-61
Identities = 35/104 (33%), Positives = 62/104 (59%)
Query: 179 ACFNKYGDLVYVGNSKGEILVIDHKSNQI----RALVPVSGAAVIKNIVFSRNGQYLLTN 234
A F++ G +Y GN+KG+ILV+D ++ ++ R +V S A +K+I F+R G L N
Sbjct: 156 ASFDRRGKHIYTGNAKGKILVLDVETFEVVASFRIIVGTSSATAVKSIEFARRGDAFLIN 215
Query: 235 SNDRTIRIYDNLLPLKNGLEALVDIEKGIAEPNGIEKMKMVGSK 278
++DR IR+YD+ + ++ + K EP I+K++ + +K
Sbjct: 216 TSDRVIRVYDS--------KEIITLGKD-GEPEPIQKLQDLVNK 250
Score = 72 (30.4 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 18/76 (23%), Positives = 38/76 (50%)
Query: 24 GVMKCIA-FNRRGTLLAAGCSDGSCVIWDFETRGIAKELR---DKECVAAITSVCWSKYG 79
G + +A F+RRG + G + G ++ D ET + R A+ S+ +++ G
Sbjct: 150 GDLNIVASFDRRGKHIYTGNAKGKILVLDVETFEVVASFRIIVGTSSATAVKSIEFARRG 209
Query: 80 HRILVSAADKSLTLWD 95
L++ +D+ + ++D
Sbjct: 210 DAFLINTSDRVIRVYD 225
Score = 49 (22.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 178 AACFNKYGDLVYVGNSKGEILVI--DHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNS 235
A N ++ V +SK EI+ + D + I+ L + K FS +G+Y+ S
Sbjct: 211 AFLINTSDRVIRVYDSK-EIITLGKDGEPEPIQKLQDLVNKTTWKKCCFSGDGEYICAGS 269
Query: 236 -NDRTIRIYD----NLLPLKNGL--EALVDI 259
+ I++ NL+ + +G E L+D+
Sbjct: 270 ARQHALYIWEKSIGNLVKILHGTKGELLLDV 300
Score = 44 (20.5 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 161 PSSRNKYSDGTPPFTPTAACFNKYGDLVYVGNSKGEILVIDHKS--NQIRALVPVSGAAV 218
P K D T CF+ G+ + G+++ L I KS N ++ L G +
Sbjct: 238 PEPIQKLQDLVNKTTWKKCCFSGDGEYICAGSARQHALYIWEKSIGNLVKILHGTKGELL 297
Query: 219 I 219
+
Sbjct: 298 L 298
>MGI|MGI:1918367 [details] [associations]
symbol:Rbbp5 "retinoblastoma binding protein 5"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0035064
"methylated histone residue binding" evidence=ISO] [GO:0035097
"histone methyltransferase complex" evidence=ISO] [GO:0043627
"response to estrogen stimulus" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0048188 "Set1C/COMPASS complex" evidence=ISO] [GO:0051568
"histone H3-K4 methylation" evidence=ISO] [GO:0071339 "MLL1
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1918367 GO:GO:0006355 Gene3D:2.130.10.10
PROSITE:PS00678 eggNOG:COG2319 EMBL:CH466520 GO:GO:0006351
GO:GO:0006974 GO:GO:0044212 GO:GO:0043627 GO:GO:0042800
GO:GO:0048188 GO:GO:0071339 CTD:5929 HOVERGEN:HBG054324 KO:K14961
OMA:YPEEFDG OrthoDB:EOG4STS4D EMBL:AK049247 EMBL:AK154782
EMBL:AK171177 EMBL:BC057632 EMBL:BC060186 IPI:IPI00226384
IPI:IPI00955092 RefSeq:NP_766105.2 UniGene:Mm.132868 PDB:2XL2
PDB:2XL3 PDBsum:2XL2 PDBsum:2XL3 ProteinModelPortal:Q8BX09
SMR:Q8BX09 IntAct:Q8BX09 STRING:Q8BX09 PhosphoSite:Q8BX09
PaxDb:Q8BX09 PRIDE:Q8BX09 Ensembl:ENSMUST00000027700 GeneID:213464
KEGG:mmu:213464 UCSC:uc007cow.2 UCSC:uc007coy.2
GeneTree:ENSGT00530000064100 HOGENOM:HOG000204856 InParanoid:Q3TBL4
EvolutionaryTrace:Q8BX09 NextBio:373990 Bgee:Q8BX09
Genevestigator:Q8BX09 Uniprot:Q8BX09
Length = 538
Score = 357 (130.7 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 85/207 (41%), Positives = 116/207 (56%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPK-EALID 341
++ QD + + WK CFSGDGE+++AGSA +H +YIW+++ G LVKIL G + E L+D
Sbjct: 243 QKLQDLVNRTPWKKCCFSGDGEYIVAGSAR--QHALYIWEKSIGNLVKILHGTRGELLLD 300
Query: 342 LAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETE 401
+AWHPV PII S+S +G V IWA++ ENWSAFAPDFK FD+ E +
Sbjct: 301 VAWHPVRPIIASIS-SGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDK 359
Query: 402 KVKE---SNVNEDEEVDIVAVDK-DAFSDSDMSQEE---LCFLPAIPCPDVPERQ--GKC 452
E ++ EDEEVD+ +VD AF SD E+ L +LP P + PE G
Sbjct: 360 SEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPP 419
Query: 453 VGS-SSKLMDRNHSGSPLSEEAMQNGQ 478
+ S LMD S + + Q
Sbjct: 420 PDAVPSSLMDEGASSEKKRQSSADGSQ 446
Score = 259 (96.2 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 58/166 (34%), Positives = 89/166 (53%)
Query: 1 MNAPIIDPLQGDFPEVIEEYLE--HGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIA 58
MN +++ ++PE + L+ + C FNR GTLLA GC+DG VIWDF TRGIA
Sbjct: 1 MNLELLESFGQNYPEEADGTLDCISMALTC-TFNRWGTLLAVGCNDGRIVIWDFLTRGIA 59
Query: 59 KELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHP 118
K + + + S+CWS+ GH+++ ++ D ++ WDVL G+ R L+ + HP
Sbjct: 60 KIISAH--IHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHP 117
Query: 119 GSSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSR 164
L CP+ SAP+++ LS +LP+ N +A R
Sbjct: 118 RDQNK--VLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDR 161
Score = 143 (55.4 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 42/122 (34%), Positives = 59/122 (48%)
Query: 127 LACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGD 186
L CP+ SAP+++ LS +LP V D S N A F++ G+
Sbjct: 124 LVCPMKSAPVMLTLSDSKHVVLP--VDD------DSDLN-----------VVASFDRRGE 164
Query: 187 LVYVGNSKGEILVIDHKSNQI----RALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRI 242
+Y GN+KG+ILV+ S + R S IK+I F+R G L N+ DR IR+
Sbjct: 165 YIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRV 224
Query: 243 YD 244
YD
Sbjct: 225 YD 226
Score = 78 (32.5 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 168 SDGTPPFTPTA-AC-FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFS 225
+DGT A C FN++G L+ VG + G I++ D + I ++ V ++ +S
Sbjct: 17 ADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVC-SLCWS 75
Query: 226 RNGQYLLTNSNDRTIRIYDNL 246
R+G L++ S D + +D L
Sbjct: 76 RDGHKLVSASTDNIVSQWDVL 96
Score = 65 (27.9 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 2 NAPIIDPLQGDFPEVIEEYLEHGVMKCIA-FNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
+AP++ L D V+ + + +A F+RRG + G + G ++ +++ +
Sbjct: 130 SAPVMLTLS-DSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVAS 188
Query: 61 LR---DKECVAAITSVCWSKYGHRILVSAADKSLTLWD 95
R AI S+ +++ G L++ AD+ + ++D
Sbjct: 189 FRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYD 226
Score = 46 (21.3 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVI--DHKSNQIRALVPVSGAAVIKNIVFSRNGQ 229
F +CF N ++ V + + EIL D + ++ L + K FS +G+
Sbjct: 206 FARKGSCFLINTADRIIRVYDGR-EILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGE 264
Query: 230 YLLTNS-NDRTIRIYD----NLLPLKNGL--EALVDI 259
Y++ S + I++ NL+ + +G E L+D+
Sbjct: 265 YIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDV 301
>UNIPROTKB|A4FUE3 [details] [associations]
symbol:RBBP5 "RBBP5 protein" species:9913 "Bos taurus"
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188 "Set1C/COMPASS
complex" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0043627 "response to estrogen
stimulus" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 eggNOG:COG2319
GO:GO:0006974 GO:GO:0044212 GO:GO:0043627 GO:GO:0042800
GO:GO:0048188 GO:GO:0071339 CTD:5929 HOVERGEN:HBG054324 KO:K14961
OMA:YPEEFDG OrthoDB:EOG4STS4D GeneTree:ENSGT00530000064100
HOGENOM:HOG000204856 EMBL:DAAA02041932 EMBL:BC114753
IPI:IPI00733210 RefSeq:NP_001076871.1 UniGene:Bt.98637 SMR:A4FUE3
STRING:A4FUE3 Ensembl:ENSBTAT00000021204 GeneID:510455
KEGG:bta:510455 InParanoid:A4FUE3 NextBio:20869451 Uniprot:A4FUE3
Length = 538
Score = 355 (130.0 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 84/207 (40%), Positives = 116/207 (56%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPK-EALID 341
++ QD + + WK CFSGDGE+++AGSA +H +YIW+++ G LVKIL G + E L+D
Sbjct: 243 QKLQDLVNRTPWKKCCFSGDGEYIVAGSAR--QHALYIWEKSIGNLVKILHGTRGELLLD 300
Query: 342 LAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETE 401
+AWHPV PII S+S +G V IWA++ ENWSAFAPDFK FD+ E +
Sbjct: 301 VAWHPVRPIIASIS-SGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDK 359
Query: 402 KVKE---SNVNEDEEVDIVAVDK-DAFSDSDMSQEE---LCFLPAIPCPDVPERQ--GKC 452
E ++ EDEEVD+ +VD AF SD E+ L +LP P + PE G
Sbjct: 360 SEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPP 419
Query: 453 VGS-SSKLMDRNHSGSPLSEEAMQNGQ 478
+ + LMD S + + Q
Sbjct: 420 PDAVQTSLMDEGASSEKKRQSSADGSQ 446
Score = 259 (96.2 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 58/166 (34%), Positives = 89/166 (53%)
Query: 1 MNAPIIDPLQGDFPEVIEEYLE--HGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIA 58
MN +++ ++PE + L+ + C FNR GTLLA GC+DG VIWDF TRGIA
Sbjct: 1 MNLELLESFGQNYPEEADGTLDCISMALTC-TFNRWGTLLAVGCNDGRIVIWDFLTRGIA 59
Query: 59 KELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHP 118
K + + + S+CWS+ GH+++ ++ D ++ WDVL G+ R L+ + HP
Sbjct: 60 KIISAH--IHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHP 117
Query: 119 GSSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSR 164
L CP+ SAP+++ LS +LP+ N +A R
Sbjct: 118 RDQNK--VLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDR 161
Score = 143 (55.4 bits), Expect = 3.5e-42, Sum P(2) = 3.5e-42
Identities = 42/122 (34%), Positives = 59/122 (48%)
Query: 127 LACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGD 186
L CP+ SAP+++ LS +LP V D S N A F++ G+
Sbjct: 124 LVCPMKSAPVMLTLSDSKHVVLP--VDD------DSDLN-----------VVASFDRRGE 164
Query: 187 LVYVGNSKGEILVIDHKSNQI----RALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRI 242
+Y GN+KG+ILV+ S + R S IK+I F+R G L N+ DR IR+
Sbjct: 165 YIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRV 224
Query: 243 YD 244
YD
Sbjct: 225 YD 226
Score = 78 (32.5 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 168 SDGTPPFTPTA-AC-FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFS 225
+DGT A C FN++G L+ VG + G I++ D + I ++ V ++ +S
Sbjct: 17 ADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVC-SLCWS 75
Query: 226 RNGQYLLTNSNDRTIRIYDNL 246
R+G L++ S D + +D L
Sbjct: 76 RDGHKLVSASTDNIVSQWDVL 96
Score = 65 (27.9 bits), Expect = 5.4e-34, Sum P(2) = 5.4e-34
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 2 NAPIIDPLQGDFPEVIEEYLEHGVMKCIA-FNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
+AP++ L D V+ + + +A F+RRG + G + G ++ +++ +
Sbjct: 130 SAPVMLTLS-DSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVAS 188
Query: 61 LR---DKECVAAITSVCWSKYGHRILVSAADKSLTLWD 95
R AI S+ +++ G L++ AD+ + ++D
Sbjct: 189 FRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYD 226
Score = 46 (21.3 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVI--DHKSNQIRALVPVSGAAVIKNIVFSRNGQ 229
F +CF N ++ V + + EIL D + ++ L + K FS +G+
Sbjct: 206 FARKGSCFLINTADRIIRVYDGR-EILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGE 264
Query: 230 YLLTNS-NDRTIRIYD----NLLPLKNGL--EALVDI 259
Y++ S + I++ NL+ + +G E L+D+
Sbjct: 265 YIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDV 301
>UNIPROTKB|Q15291 [details] [associations]
symbol:RBBP5 "Retinoblastoma-binding protein 5"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0048188 "Set1C/COMPASS complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0043627
"response to estrogen stimulus" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0035097
"histone methyltransferase complex" evidence=IDA;IPI] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
PROSITE:PS00678 eggNOG:COG2319 EMBL:CH471067 GO:GO:0006351
GO:GO:0006974 GO:GO:0044212 GO:GO:0043627 GO:GO:0035064
GO:GO:0048188 GO:GO:0051568 GO:GO:0071339 EMBL:AL583832
EMBL:AC093422 PDB:3P4F PDBsum:3P4F EMBL:X85134 EMBL:AK290137
EMBL:BC037284 EMBL:BC053856 EMBL:BC075059 EMBL:BC075060
IPI:IPI00478230 IPI:IPI00645975 PIR:A57624 RefSeq:NP_001180201.1
RefSeq:NP_001180202.1 RefSeq:NP_005048.2 UniGene:Hs.519230
ProteinModelPortal:Q15291 SMR:Q15291 DIP:DIP-29224N IntAct:Q15291
STRING:Q15291 PhosphoSite:Q15291 DMDM:209572664 PaxDb:Q15291
PRIDE:Q15291 DNASU:5929 Ensembl:ENST00000264515
Ensembl:ENST00000367164 GeneID:5929 KEGG:hsa:5929 UCSC:uc001hbu.2
UCSC:uc001hbv.2 CTD:5929 GeneCards:GC01M205055 H-InvDB:HIX0023636
HGNC:HGNC:9888 MIM:600697 neXtProt:NX_Q15291 PharmGKB:PA34252
HOVERGEN:HBG054324 InParanoid:Q15291 KO:K14961 OMA:YPEEFDG
OrthoDB:EOG4STS4D PhylomeDB:Q15291 GenomeRNAi:5929 NextBio:23098
Bgee:Q15291 CleanEx:HS_RBBP5 Genevestigator:Q15291
GermOnline:ENSG00000117222 Uniprot:Q15291
Length = 538
Score = 355 (130.0 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 84/207 (40%), Positives = 116/207 (56%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPK-EALID 341
++ QD + + WK CFSGDGE+++AGSA +H +YIW+++ G LVKIL G + E L+D
Sbjct: 243 QKLQDLVNRTPWKKCCFSGDGEYIVAGSAR--QHALYIWEKSIGNLVKILHGTRGELLLD 300
Query: 342 LAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETE 401
+AWHPV PII S+S +G V IWA++ ENWSAFAPDFK FD+ E +
Sbjct: 301 VAWHPVRPIIASIS-SGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDK 359
Query: 402 KVKE---SNVNEDEEVDIVAVDK-DAFSDSDMSQEE---LCFLPAIPCPDVPERQ--GKC 452
E ++ EDEEVD+ +VD AF SD E+ L +LP P + PE G
Sbjct: 360 SEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPP 419
Query: 453 VGS-SSKLMDRNHSGSPLSEEAMQNGQ 478
+ + LMD S + + Q
Sbjct: 420 PDAVQTSLMDEGASSEKKRQSSADGSQ 446
Score = 259 (96.2 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 58/166 (34%), Positives = 89/166 (53%)
Query: 1 MNAPIIDPLQGDFPEVIEEYLE--HGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIA 58
MN +++ ++PE + L+ + C FNR GTLLA GC+DG VIWDF TRGIA
Sbjct: 1 MNLELLESFGQNYPEEADGTLDCISMALTC-TFNRWGTLLAVGCNDGRIVIWDFLTRGIA 59
Query: 59 KELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHP 118
K + + + S+CWS+ GH+++ ++ D ++ WDVL G+ R L+ + HP
Sbjct: 60 KIISAH--IHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHP 117
Query: 119 GSSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSR 164
L CP+ SAP+++ LS +LP+ N +A R
Sbjct: 118 RDQNK--VLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDR 161
Score = 143 (55.4 bits), Expect = 3.5e-42, Sum P(2) = 3.5e-42
Identities = 42/122 (34%), Positives = 59/122 (48%)
Query: 127 LACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGD 186
L CP+ SAP+++ LS +LP V D S N A F++ G+
Sbjct: 124 LVCPMKSAPVMLTLSDSKHVVLP--VDD------DSDLN-----------VVASFDRRGE 164
Query: 187 LVYVGNSKGEILVIDHKSNQI----RALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRI 242
+Y GN+KG+ILV+ S + R S IK+I F+R G L N+ DR IR+
Sbjct: 165 YIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRV 224
Query: 243 YD 244
YD
Sbjct: 225 YD 226
Score = 78 (32.5 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 168 SDGTPPFTPTA-AC-FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFS 225
+DGT A C FN++G L+ VG + G I++ D + I ++ V ++ +S
Sbjct: 17 ADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVC-SLCWS 75
Query: 226 RNGQYLLTNSNDRTIRIYDNL 246
R+G L++ S D + +D L
Sbjct: 76 RDGHKLVSASTDNIVSQWDVL 96
Score = 65 (27.9 bits), Expect = 5.4e-34, Sum P(2) = 5.4e-34
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 2 NAPIIDPLQGDFPEVIEEYLEHGVMKCIA-FNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
+AP++ L D V+ + + +A F+RRG + G + G ++ +++ +
Sbjct: 130 SAPVMLTLS-DSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVAS 188
Query: 61 LR---DKECVAAITSVCWSKYGHRILVSAADKSLTLWD 95
R AI S+ +++ G L++ AD+ + ++D
Sbjct: 189 FRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYD 226
Score = 46 (21.3 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVI--DHKSNQIRALVPVSGAAVIKNIVFSRNGQ 229
F +CF N ++ V + + EIL D + ++ L + K FS +G+
Sbjct: 206 FARKGSCFLINTADRIIRVYDGR-EILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGE 264
Query: 230 YLLTNS-NDRTIRIYD----NLLPLKNGL--EALVDI 259
Y++ S + I++ NL+ + +G E L+D+
Sbjct: 265 YIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDV 301
>UNIPROTKB|F1NSH5 [details] [associations]
symbol:RBBP5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0048188 "Set1C/COMPASS complex"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 GO:GO:0006974 GO:GO:0044212 GO:GO:0043627
GO:GO:0042800 GO:GO:0048188 GO:GO:0071339 OMA:YPEEFDG
GeneTree:ENSGT00530000064100 EMBL:AADN02044912 IPI:IPI00651381
Ensembl:ENSGALT00000000943 ArrayExpress:F1NSH5 Uniprot:F1NSH5
Length = 530
Score = 354 (129.7 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 78/173 (45%), Positives = 106/173 (61%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPK-EALID 341
++ QD + + WK CFSGDGE+++AGSA +H +YIW+++ G LVKIL G + E L+D
Sbjct: 243 QKLQDLVNRTPWKKCCFSGDGEYIVAGSAR--QHALYIWEKSIGNLVKILHGTRGELLLD 300
Query: 342 LAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETE 401
+AWHPV PII S+S +G V IWA++ ENWSAFAPDFK FD+ E +
Sbjct: 301 VAWHPVRPIIASIS-SGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDK 359
Query: 402 KVKE---SNVNEDEEVDIVAVDK-DAFSDSDMSQEE---LCFLPAIPCPDVPE 447
E ++ EDEEVD+ +VD AF SD E+ L +LP P + PE
Sbjct: 360 SEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPE 412
Score = 259 (96.2 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 58/166 (34%), Positives = 90/166 (54%)
Query: 1 MNAPIIDPLQGDFPEVIEEYLE--HGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIA 58
MN +++ ++PE + L+ + C FNR GTLLA GC+DG VIWDF TRGIA
Sbjct: 1 MNLELLESFGQNYPEEADGTLDCISMALTC-TFNRWGTLLAVGCNDGRIVIWDFLTRGIA 59
Query: 59 KELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHP 118
K + + + S+CWS+ GH+++ ++ D ++ WDVL G+ R L+ + HP
Sbjct: 60 KIISAH--IHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHP 117
Query: 119 GSSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSR 164
+ L CP+ SAP+++ LS +LP+ N +A R
Sbjct: 118 RDQ--NRVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDR 161
Score = 140 (54.3 bits), Expect = 8.1e-42, Sum P(2) = 8.1e-42
Identities = 41/122 (33%), Positives = 59/122 (48%)
Query: 127 LACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGD 186
L CP+ SAP+++ LS +LP V D S N A F++ G+
Sbjct: 124 LVCPMKSAPVMLTLSDSKHVVLP--VDD------DSDLN-----------VVASFDRRGE 164
Query: 187 LVYVGNSKGEILVIDHKSNQI----RALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRI 242
+Y GN+KG+ILV+ + + R S IK+I F+R G L N+ DR IR+
Sbjct: 165 YIYTGNAKGKILVLKTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRV 224
Query: 243 YD 244
YD
Sbjct: 225 YD 226
Score = 78 (32.5 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 168 SDGTPPFTPTA-AC-FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFS 225
+DGT A C FN++G L+ VG + G I++ D + I ++ V ++ +S
Sbjct: 17 ADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVC-SLCWS 75
Query: 226 RNGQYLLTNSNDRTIRIYDNL 246
R+G L++ S D + +D L
Sbjct: 76 RDGHKLVSASTDNIVSQWDVL 96
Score = 69 (29.3 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 2 NAPIIDPLQGDFPEVIEEYLEHGVMKCIA-FNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
+AP++ L D V+ + + +A F+RRG + G + G ++ +T+ +
Sbjct: 130 SAPVMLTLS-DSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDTQDLVAS 188
Query: 61 LR---DKECVAAITSVCWSKYGHRILVSAADKSLTLWD 95
R AI S+ +++ G L++ AD+ + ++D
Sbjct: 189 FRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYD 226
Score = 46 (21.3 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVI--DHKSNQIRALVPVSGAAVIKNIVFSRNGQ 229
F +CF N ++ V + + EIL D + ++ L + K FS +G+
Sbjct: 206 FARKGSCFLINTADRIIRVYDGR-EILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGE 264
Query: 230 YLLTNS-NDRTIRIYD----NLLPLKNGL--EALVDI 259
Y++ S + I++ NL+ + +G E L+D+
Sbjct: 265 YIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDV 301
>RGD|1305532 [details] [associations]
symbol:Rbbp5 "retinoblastoma binding protein 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISO] [GO:0035064
"methylated histone residue binding" evidence=IEA;ISO] [GO:0035097
"histone methyltransferase complex" evidence=ISO] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043627 "response to estrogen stimulus"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0048188 "Set1C/COMPASS complex"
evidence=IEA;ISO] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO] [GO:0071339 "MLL1 complex" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305532 Gene3D:2.130.10.10 GO:GO:0006974 GO:GO:0044212
GO:GO:0043627 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
EMBL:CH473958 CTD:5929 KO:K14961 OrthoDB:EOG4STS4D
GeneTree:ENSGT00530000064100 IPI:IPI00371988 RefSeq:NP_001100644.1
UniGene:Rn.11774 Ensembl:ENSRNOT00000036110 GeneID:304794
KEGG:rno:304794 UCSC:RGD:1305532 NextBio:653624 Uniprot:D3ZC01
Length = 538
Score = 354 (129.7 bits), Expect = 3.4e-54, Sum P(2) = 3.4e-54
Identities = 78/173 (45%), Positives = 106/173 (61%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPK-EALID 341
++ QD + + WK CFSGDGE+++AGSA +H +YIW+++ G LVKIL G + E L+D
Sbjct: 243 QKLQDLVNRTPWKKCCFSGDGEYIVAGSAR--QHALYIWEKSIGNLVKILHGTRGELLLD 300
Query: 342 LAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETE 401
+AWHPV PII S+S +G V IWA++ ENWSAFAPDFK FD+ E +
Sbjct: 301 VAWHPVRPIIASIS-SGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDK 359
Query: 402 KVKE---SNVNEDEEVDIVAVDK-DAFSDSDMSQEE---LCFLPAIPCPDVPE 447
E ++ EDEEVD+ +VD AF SD E+ L +LP P + PE
Sbjct: 360 SEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPE 412
Score = 259 (96.2 bits), Expect = 3.4e-54, Sum P(2) = 3.4e-54
Identities = 58/166 (34%), Positives = 89/166 (53%)
Query: 1 MNAPIIDPLQGDFPEVIEEYLE--HGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIA 58
MN +++ ++PE + L+ + C FNR GTLLA GC+DG VIWDF TRGIA
Sbjct: 1 MNLELLESFGQNYPEEADGTLDCISMALTC-TFNRWGTLLAVGCNDGRIVIWDFLTRGIA 59
Query: 59 KELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHP 118
K + + + S+CWS+ GH+++ ++ D ++ WDVL G+ R L+ + HP
Sbjct: 60 KIISAH--IHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHP 117
Query: 119 GSSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSR 164
L CP+ SAP+++ LS +LP+ N +A R
Sbjct: 118 RDQNK--VLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDR 161
Score = 143 (55.4 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 42/122 (34%), Positives = 59/122 (48%)
Query: 127 LACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGD 186
L CP+ SAP+++ LS +LP V D S N A F++ G+
Sbjct: 124 LVCPMKSAPVMLTLSDSKHVVLP--VDD------DSDLN-----------VVASFDRRGE 164
Query: 187 LVYVGNSKGEILVIDHKSNQI----RALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRI 242
+Y GN+KG+ILV+ S + R S IK+I F+R G L N+ DR IR+
Sbjct: 165 YIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRV 224
Query: 243 YD 244
YD
Sbjct: 225 YD 226
Score = 78 (32.5 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 168 SDGTPPFTPTA-AC-FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFS 225
+DGT A C FN++G L+ VG + G I++ D + I ++ V ++ +S
Sbjct: 17 ADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVC-SLCWS 75
Query: 226 RNGQYLLTNSNDRTIRIYDNL 246
R+G L++ S D + +D L
Sbjct: 76 RDGHKLVSASTDNIVSQWDVL 96
Score = 65 (27.9 bits), Expect = 8.1e-34, Sum P(2) = 8.1e-34
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 2 NAPIIDPLQGDFPEVIEEYLEHGVMKCIA-FNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
+AP++ L D V+ + + +A F+RRG + G + G ++ +++ +
Sbjct: 130 SAPVMLTLS-DSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVAS 188
Query: 61 LR---DKECVAAITSVCWSKYGHRILVSAADKSLTLWD 95
R AI S+ +++ G L++ AD+ + ++D
Sbjct: 189 FRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYD 226
Score = 46 (21.3 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVI--DHKSNQIRALVPVSGAAVIKNIVFSRNGQ 229
F +CF N ++ V + + EIL D + ++ L + K FS +G+
Sbjct: 206 FARKGSCFLINTADRIIRVYDGR-EILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGE 264
Query: 230 YLLTNS-NDRTIRIYD----NLLPLKNGL--EALVDI 259
Y++ S + I++ NL+ + +G E L+D+
Sbjct: 265 YIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDV 301
>UNIPROTKB|F1S359 [details] [associations]
symbol:RBBP5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043627 "response
to estrogen stimulus" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 GO:GO:0006974 GO:GO:0044212 GO:GO:0043627
GO:GO:0042800 GO:GO:0048188 GO:GO:0071339 OMA:YPEEFDG
GeneTree:ENSGT00530000064100 EMBL:FP103014
Ensembl:ENSSSCT00000016659 Uniprot:F1S359
Length = 546
Score = 355 (130.0 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 84/207 (40%), Positives = 116/207 (56%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPK-EALID 341
++ QD + + WK CFSGDGE+++AGSA +H +YIW+++ G LVKIL G + E L+D
Sbjct: 248 QKLQDLVNRTPWKKCCFSGDGEYIVAGSAR--QHALYIWEKSIGNLVKILHGTRGELLLD 305
Query: 342 LAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETE 401
+AWHPV PII S+S +G V IWA++ ENWSAFAPDFK FD+ E +
Sbjct: 306 VAWHPVRPIIASIS-SGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDK 364
Query: 402 KVKE---SNVNEDEEVDIVAVDK-DAFSDSDMSQEE---LCFLPAIPCPDVPERQ--GKC 452
E ++ EDEEVD+ +VD AF SD E+ L +LP P + PE G
Sbjct: 365 SEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPP 424
Query: 453 VGS-SSKLMDRNHSGSPLSEEAMQNGQ 478
+ + LMD S + + Q
Sbjct: 425 PDAVQTSLMDEGASSEKKRQSSADGSQ 451
Score = 249 (92.7 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 56/155 (36%), Positives = 84/155 (54%)
Query: 12 DFPEVIEEYLE--HGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAA 69
++PE + L+ + C FNR GTLLA GC+DG VIWDF TRGIAK + +
Sbjct: 17 NYPEEADGTLDCISMALTC-TFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAH--IHP 73
Query: 70 ITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLAC 129
+ S+CWS+ GH+++ ++ D ++ WDVL G+ R L+ + HP L C
Sbjct: 74 VCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNK--VLVC 131
Query: 130 PLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSR 164
P+ SAP+++ LS +LP+ N +A R
Sbjct: 132 PMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDR 166
Score = 143 (55.4 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 42/122 (34%), Positives = 59/122 (48%)
Query: 127 LACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGD 186
L CP+ SAP+++ LS +LP V D S N A F++ G+
Sbjct: 129 LVCPMKSAPVMLTLSDSKHVVLP--VDD------DSDLN-----------VVASFDRRGE 169
Query: 187 LVYVGNSKGEILVIDHKSNQI----RALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRI 242
+Y GN+KG+ILV+ S + R S IK+I F+R G L N+ DR IR+
Sbjct: 170 YIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRV 229
Query: 243 YD 244
YD
Sbjct: 230 YD 231
Score = 78 (32.5 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 168 SDGTPPFTPTA-AC-FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFS 225
+DGT A C FN++G L+ VG + G I++ D + I ++ V ++ +S
Sbjct: 22 ADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVC-SLCWS 80
Query: 226 RNGQYLLTNSNDRTIRIYDNL 246
R+G L++ S D + +D L
Sbjct: 81 RDGHKLVSASTDNIVSQWDVL 101
Score = 65 (27.9 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 2 NAPIIDPLQGDFPEVIEEYLEHGVMKCIA-FNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
+AP++ L D V+ + + +A F+RRG + G + G ++ +++ +
Sbjct: 135 SAPVMLTLS-DSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVAS 193
Query: 61 LR---DKECVAAITSVCWSKYGHRILVSAADKSLTLWD 95
R AI S+ +++ G L++ AD+ + ++D
Sbjct: 194 FRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYD 231
Score = 46 (21.3 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVI--DHKSNQIRALVPVSGAAVIKNIVFSRNGQ 229
F +CF N ++ V + + EIL D + ++ L + K FS +G+
Sbjct: 211 FARKGSCFLINTADRIIRVYDGR-EILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGE 269
Query: 230 YLLTNS-NDRTIRIYD----NLLPLKNGL--EALVDI 259
Y++ S + I++ NL+ + +G E L+D+
Sbjct: 270 YIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDV 306
>POMBASE|SPAC23H3.05c [details] [associations]
symbol:swd1 "Set1C complex subunit Swd1" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0016571 "histone methylation" evidence=IMP] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC23H3.05c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006338
GO:GO:0000790 GO:GO:0048188 GO:GO:0051568 KO:K14961
HOGENOM:HOG000204856 PIR:T38298 RefSeq:NP_593795.1
ProteinModelPortal:O42858 STRING:O42858 EnsemblFungi:SPAC23H3.05c.1
GeneID:2541776 KEGG:spo:SPAC23H3.05c OMA:VNRLQWN OrthoDB:EOG4PP1RS
NextBio:20802867 Uniprot:O42858
Length = 398
Score = 280 (103.6 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 56/123 (45%), Positives = 76/123 (61%)
Query: 285 EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDLA 343
+FQD + ++ W + FS GE+V A + H IY+W+R G LVKILEGPKE L+D+
Sbjct: 247 KFQDVVNRLQWNSCGFSQTGEFVFATTYQMA-HAIYVWERGMGSLVKILEGPKEELVDVD 305
Query: 344 WHPVHPIIVSVSL-TGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETEK 402
WHPV P + SV L +G +YIWA + E+WSAFAPDF+ FD++ ET K
Sbjct: 306 WHPVFPCVASVGLDSGSIYIWAVEQKESWSAFAPDFQELEENIEYEEPEDEFDIHDETGK 365
Query: 403 VKE 405
+E
Sbjct: 366 SEE 368
Score = 259 (96.2 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 76/242 (31%), Positives = 112/242 (46%)
Query: 1 MNAPIIDPLQ-GDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK 59
MN ++DP D+PE + L+HG I F+ G LA+G +GS VIWD T +++
Sbjct: 1 MNLELLDPFSIPDYPEALTTTLKHGHATSIRFSTNGYHLASGLVNGSVVIWDLSTFSVSR 60
Query: 60 ELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPG 119
L AI SVCWS +L ++ D LWD+ G + ++VL A LHP
Sbjct: 61 VLTGH--TRAIQSVCWSSCDRFLLTASRDWKCILWDLRDGSIVYQVVLSAPVWSASLHPH 118
Query: 120 SSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAA 179
+ S +IVD LP PD+ + RN+ T +
Sbjct: 119 KINTFVASLLDESPQLIIVDDGIPKHKYLPTN-PDIDENYS-DRRNRSKHVT-----LVS 171
Query: 180 CFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRT 239
F+ G+ + G SKG VID + +IR+ ++ + IK I S ++L+ NS DR
Sbjct: 172 FFHPSGEYILSGTSKGWFHVIDASTTKIRSSHRITSQS-IKQIRLSFCKRFLIFNSTDRV 230
Query: 240 IR 241
IR
Sbjct: 231 IR 232
Score = 44 (20.5 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 17/96 (17%), Positives = 43/96 (44%)
Query: 149 PIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGDLVYVGNSKGEILVIDHKSNQIR 208
P ++PD + + ++ ++ T+ F+ G + G G +++ D + +
Sbjct: 8 PFSIPDYPEALTTTLKHGHA--------TSIRFSTNGYHLASGLVNGSVVIWDLSTFSVS 59
Query: 209 ALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYD 244
++ I+++ +S ++LLT S D ++D
Sbjct: 60 RVL-TGHTRAIQSVCWSSCDRFLLTASRDWKCILWD 94
>UNIPROTKB|G4MT88 [details] [associations]
symbol:MGG_04651 "SET1 complex component swd1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CM001232 KO:K14961
RefSeq:XP_003713641.1 ProteinModelPortal:G4MT88
EnsemblFungi:MGG_04651T0 GeneID:2678091 KEGG:mgr:MGG_04651
Uniprot:G4MT88
Length = 468
Score = 269 (99.8 bits), Expect = 5.5e-40, Sum P(2) = 5.5e-40
Identities = 70/239 (29%), Positives = 117/239 (48%)
Query: 7 DPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKEC 66
D L D+PE I + G C+ FNR+G LA+G DG+ V+WD +T G+A++LR
Sbjct: 8 DYLLQDYPENITNTIRSGHATCLRFNRKGDYLASGRVDGAVVVWDLDTMGVARKLRGHS- 66
Query: 67 VAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLC 126
++TS+ WS G +L + +WD+ G + + + A +P + P
Sbjct: 67 -KSVTSLSWSTCGRYLLSACQGWKAIIWDLRNGARHREVRFRAPVYIAEFNPRN--PLQF 123
Query: 127 LACPLSSAPMIVDLST--GSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKY 184
+A P++VD + ILP A + + ++K++ T A ++
Sbjct: 124 VASIFEDQPVVVDATNPIDVKHILPCKPKRPATDDS-ALKDKWAKEDAKQMTTVAIYDSA 182
Query: 185 GDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIY 243
GD + G SKG + +ID K++++ + A VI + + NG+ LL NS DR IR +
Sbjct: 183 GDYILAGTSKGWLNIIDAKTHEV-IFSKKTCALVITTMRLTHNGKILLLNSQDRIIRTF 240
Score = 224 (83.9 bits), Expect = 5.5e-40, Sum P(2) = 5.5e-40
Identities = 57/205 (27%), Positives = 103/205 (50%)
Query: 285 EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDLA 343
+FQD + ++ W FS GE+V A + + H++YIW+R G LV++LEG KE +
Sbjct: 262 KFQDVVNRLQWNHVTFSATGEYVAASTYNN--HELYIWERNHGSLVRMLEGTKEEQGTIE 319
Query: 344 WHPVHPIIVSVSL-TGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETEK 402
WHP ++ + L TG + IW+ + WSA APDF FD+ E E+
Sbjct: 320 WHPHRAMLAACGLETGRINIWSVTSPQRWSALAPDFVEVEENVQYVEREDEFDI-LEQEE 378
Query: 403 VKESNVN-EDEEVDIVAVD-KDAFSDSDMSQEELCFLPAIPCPDVPERQGKCVGSSSKLM 460
+ + ++ ED++V+++A+ D ++ D + + +P + + + + V S+ M
Sbjct: 379 IAKRRLDLEDDDVEVLAMHANDGYTGDDTTFQ----VPILYNLGESDSEEEFVAVSTGTM 434
Query: 461 DRNHSGSPLSEEAMQNGQAANHASS 485
R G + ++ N A A++
Sbjct: 435 RRRSPGDGEGDGSVDNRATAKKATT 459
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 224 FSRNGQYLLTNSNDRTIRIYD 244
F+R G YL + D + ++D
Sbjct: 32 FNRKGDYLASGRVDGAVVVWD 52
>WB|WBGene00017683 [details] [associations]
symbol:rbbp-5 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008340 GO:GO:0009792
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0040027 EMBL:FO080717 KO:K14961 OMA:YPEEFDG
GeneTree:ENSGT00530000064100 HOGENOM:HOG000204856 PIR:T16130
RefSeq:NP_495222.2 ProteinModelPortal:Q09309 SMR:Q09309
STRING:Q09309 PaxDb:Q09309 EnsemblMetazoa:F21H12.1 GeneID:174019
KEGG:cel:CELE_F21H12.1 UCSC:F21H12.1 CTD:174019 WormBase:F21H12.1
InParanoid:Q09309 NextBio:882151 Uniprot:Q09309
Length = 454
Score = 252 (93.8 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 58/153 (37%), Positives = 84/153 (54%)
Query: 288 DSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPK-EALIDLAWH 345
D + K WK C DG +V G+++K H +YIW+ G L+KIL G K EAL+D+ WH
Sbjct: 246 DMVNKAAWKNVCTDSDGLYV-CGASTKA-HSLYIWESNTGSLIKILHGNKGEALLDVQWH 303
Query: 346 PVHPIIVSVSLTGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTET---EK 402
P PII+S++ G V +W + + ENWSAFAP+F+ FD+ E +
Sbjct: 304 PTRPIILSIA-QGTVSMWTQAHVENWSAFAPEFQELEENEKYIEKENEFDMEDEDADEDM 362
Query: 403 VKESNVNEDEEVDIVAVDKDAFSDSDMSQEELC 435
+S ED+ +D+V V + + S S EE C
Sbjct: 363 TSKSQDAEDDIIDVVNVRPEDYLAS--SDEEDC 393
Score = 202 (76.2 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 51/170 (30%), Positives = 88/170 (51%)
Query: 5 IIDPLQG-DFPEVIEEYLE--HGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKEL 61
I+D G FPE +E +L+ + C FNR G+++A GC+DG +I+DF TR IA+
Sbjct: 4 ILDRTYGAQFPEELECHLDLQNASANCCKFNRWGSIVAVGCTDGRVLIYDFMTRNIARTF 63
Query: 62 RDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSS 121
C+ ++ + WS+ G ++L S+AD S+ ++DVL G + RI A HP +
Sbjct: 64 -SAHCLP-VSCLSWSRDGRKLLTSSADNSIAMFDVLAGTLLHRIRFNSMVTFAMFHPRND 121
Query: 122 TPSLCLACPLSSAPMIVDLSTGSTSILPIAVP----DVANGIAPSSRNKY 167
++ L ++ P + S ++L P + A+ ++ + KY
Sbjct: 122 NKAIVLQ--VNKQPTVEQFSPRIQTVLANDTPGSSDESASCVSYDRKGKY 169
Score = 94 (38.1 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 177 TAAC--FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTN 234
+A C FN++G +V VG + G +L+ D + I A + + + +SR+G+ LLT+
Sbjct: 27 SANCCKFNRWGSIVAVGCTDGRVLIYDFMTRNI-ARTFSAHCLPVSCLSWSRDGRKLLTS 85
Query: 235 SNDRTIRIYDNL 246
S D +I ++D L
Sbjct: 86 SADNSIAMFDVL 97
Score = 91 (37.1 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
Identities = 21/101 (20%), Positives = 50/101 (49%)
Query: 147 ILPIAVPDVANGIAPSSRNKYSDGTPPFTP-TAAC--FNKYGDLVYVGNSKGEILVIDHK 203
+L + +P + ++ TP + +A+C +++ G + G KG++L+ + +
Sbjct: 126 VLQVNKQPTVEQFSPRIQTVLANDTPGSSDESASCVSYDRKGKYIIAGTGKGKLLIYNAE 185
Query: 204 SNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYD 244
+ + A + I+ I+ ++++TN+ DR IR Y+
Sbjct: 186 TLKCVAWCKQNTVQQIRQIIVPMKSRFIITNTQDRVIRTYE 226
Score = 58 (25.5 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFET 54
C++++R+G + AG G +I++ ET
Sbjct: 160 CVSYDRKGKYIIAGTGKGKLLIYNAET 186
>CGD|CAL0004413 [details] [associations]
symbol:SWD1 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0042800 "histone methyltransferase activity
(H3-K4 specific)" evidence=IEA] [GO:0051568 "histone H3-K4
methylation" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004413 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K14961 RefSeq:XP_717669.1 RefSeq:XP_717763.1
ProteinModelPortal:Q5A7S8 STRING:Q5A7S8 GeneID:3640535
GeneID:3640663 KEGG:cal:CaO19.12843 KEGG:cal:CaO19.5388
Uniprot:Q5A7S8
Length = 447
Score = 347 (127.2 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 116/451 (25%), Positives = 197/451 (43%)
Query: 1 MNAPIIDPLQ--GDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIA 58
MN + DP +FPE + L +G I FN +G LA+G SDGS VI++ + G+
Sbjct: 1 MNLSLQDPFSVAKEFPETLTNTLNYGHSVAIQFNHKGDYLASGLSDGSIVIYEMVSSGVI 60
Query: 59 KELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLK---------GEK-ITRIVLQ 108
L + ITS+ WSK G +L S+ D + LWD+ K E + R V
Sbjct: 61 AHLNQYCHIRPITSITWSKCGRYLLTSSQDWWVKLWDLSKVNITDAKDIDESPVIREVKF 120
Query: 109 QTPL-QARLHPGSSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKY 167
P+ A +HP + P + A +P+ VD + P + + P N+
Sbjct: 121 DGPIWSACMHP--TNPFVFTASLFEDSPVYVDFTAKDQ---PPQITRLTT--TPLEMNEP 173
Query: 168 SDGTPP---FTPTAACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVF 224
++G K+ LV + +G + + S N+V
Sbjct: 174 TEGDDEEEIARKRRKKMEKHMTLVSIFTHEGNYIFTGTSKGWLNIFDTTSSNL---NLVR 230
Query: 225 SRNGQYLLTNSNDRTIRIYDNLLPLK-NGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
S + NSN + + I N L N + ++ + I P+ I ++ +
Sbjct: 231 SIK----IANSNIKNLMISQNGRKLAVNSSDRII---RQIDLPDLIN-VEDSNDWDFEID 282
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDL 342
++QD + ++ W + F+ + E+++A + + H +Y+W+ + LVKILEG E L+D+
Sbjct: 283 HKYQDVVNRLQWNSISFNHNAEFLVASTHGQSSHDLYLWETSMASLVKILEGSNEELVDV 342
Query: 343 AWHPVHPIIVSVSL-TGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETE 401
W+ I S+ L +G +Y+W+ + + WSA APDF FD+ E E
Sbjct: 343 KWNYSRCTIGSIGLDSGIIYLWSVQFPQKWSALAPDFVEIEENIEYLEKEDEFDIIDEDE 402
Query: 402 KVKESNVNEDEEVDIVAVDKDAFSDSDMSQE 432
K+ ED D++ +D D++Q+
Sbjct: 403 LHKKRLEEEDYVADVLKMDTTDARGFDITQD 433
>SGD|S000000064 [details] [associations]
symbol:SWD1 "Subunit of the COMPASS (Set1C) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0048188 "Set1C/COMPASS
complex" evidence=IPI] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IMP;IDA] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000064 EMBL:BK006935 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006348
GO:GO:0048188 GO:GO:0051568 GO:GO:0000781 GO:GO:0000723 EMBL:L22015
KO:K14961 GeneTree:ENSGT00530000064100 HOGENOM:HOG000204856
OMA:VNRLQWN OrthoDB:EOG4PP1RS PIR:S40901 RefSeq:NP_009403.1
ProteinModelPortal:P39706 SMR:P39706 DIP:DIP-1753N IntAct:P39706
MINT:MINT-393563 STRING:P39706 PaxDb:P39706 EnsemblFungi:YAR003W
GeneID:851265 KEGG:sce:YAR003W CYGD:YAR003w NextBio:968231
Genevestigator:P39706 GermOnline:YAR003W Uniprot:P39706
Length = 426
Score = 204 (76.9 bits), Expect = 3.7e-30, Sum P(2) = 3.7e-30
Identities = 47/140 (33%), Positives = 73/140 (52%)
Query: 280 LALFREFQDSITKMHWKAPCFSGD-GEWVIAGSASKGEHKIYIWDR-AGYLVKILEGPKE 337
L L ++QD I K+ W FS + E+++A + H++YIW+ +G LV++LEG +E
Sbjct: 254 LTLEHKYQDVINKLQWNCILFSNNTAEYLVASTHGSSAHELYIWETTSGTLVRVLEGAEE 313
Query: 338 ALIDLAWHPVHPIIVSVSL-TGWVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDL 396
LID+ W IVS +G VY+W+ WSA APDF+ FD
Sbjct: 314 ELIDINWDFYSMSIVSNGFESGNVYVWSVVIPPKWSALAPDFEEVEENVDYLEKEDEFDE 373
Query: 397 NTETEKVKESNVNEDEEVDI 416
E E+ + + ++EE+ I
Sbjct: 374 VDEAEQ--QQGLEQEEEIAI 391
Score = 202 (76.2 bits), Expect = 3.7e-30, Sum P(2) = 3.7e-30
Identities = 72/254 (28%), Positives = 117/254 (46%)
Query: 1 MNAPIIDPLQ--GDFPEVIEEYLEHGVM-KCIAFNRRGTLLAAGCSDGSCVIWDFET-RG 56
MN + DP + PE + +E+ + +C+ F+ G LA GC++G+ VI+D +T R
Sbjct: 1 MNILLQDPFAVLKEHPEKLTHTIENPLRTECLQFSPCGDYLALGCANGALVIYDMDTFRP 60
Query: 57 IAKELRDKEC-VAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQAR 115
I V ITS+ WS G +L S+ D S+ LWD+ K K + + +P+
Sbjct: 61 ICVPGNMLGAHVRPITSIAWSPDGRLLLTSSRDWSIKLWDLSKPSKPLKEIRFDSPIWGC 120
Query: 116 LHPGSSTPSLCLACPLS-SAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPF 174
+ LC+A S ++D S P+A + S K TP
Sbjct: 121 QWLDAKR-RLCVATIFEESDAYVIDFSND-----PVA------SLLSKSDEKQLSSTPDH 168
Query: 175 TPTAAC--FNKYGDLVYVGNSKGEILVID-HKSNQIRALVPVS-GAAVIKNIVFSRNGQY 230
C K+ +++ VG SKG + H Q + + ++ IK+++ S+NG+
Sbjct: 169 GYVLVCTVHTKHPNIIIVGTSKGWLDFYKFHSLYQTECIHSLKITSSNIKHLIVSQNGER 228
Query: 231 LLTNSNDRTIRIYD 244
L N +DRTIR Y+
Sbjct: 229 LAINCSDRTIRQYE 242
Score = 79 (32.9 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRAL-VP--VSGAAV--IKNIVFSRNGQYLLTNS 235
F+ GD + +G + G +++ D + R + VP + GA V I +I +S +G+ LLT+S
Sbjct: 34 FSPCGDYLALGCANGALVIYD--MDTFRPICVPGNMLGAHVRPITSIAWSPDGRLLLTSS 91
Query: 236 NDRTIRIYDNLLPLK 250
D +I+++D P K
Sbjct: 92 RDWSIKLWDLSKPSK 106
Score = 56 (24.8 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 16/97 (16%), Positives = 43/97 (44%)
Query: 2 NAPIIDPLQGDFPEVIEEYLEHG-VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
N P+ L + + +HG V+ C + ++ G S G + F + +
Sbjct: 147 NDPVASLLSKSDEKQLSSTPDHGYVLVCTVHTKHPNIIIVGTSKGWLDFYKFHSLYQTEC 206
Query: 61 LRDKECVAA-ITSVCWSKYGHRILVSAADKSLTLWDV 96
+ + ++ I + S+ G R+ ++ +D+++ +++
Sbjct: 207 IHSLKITSSNIKHLIVSQNGERLAINCSDRTIRQYEI 243
>ASPGD|ASPL0000062656 [details] [associations]
symbol:AN0808 species:162425 "Emericella nidulans"
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 EMBL:AACD01000013
KO:K14961 HOGENOM:HOG000204856 OMA:VNRLQWN OrthoDB:EOG4PP1RS
RefSeq:XP_658412.1 ProteinModelPortal:Q5BF72 STRING:Q5BF72
EnsemblFungi:CADANIAT00001853 GeneID:2876584 KEGG:ani:AN0808.2
Uniprot:Q5BF72
Length = 477
Score = 302 (111.4 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 104/369 (28%), Positives = 168/369 (45%)
Query: 67 VAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQ-ARLHPGSSTPSL 125
+ I S+ WS+ G +L S+ D LWD+ G ++ R V + P+ A LHP + L
Sbjct: 67 IRQIQSLSWSRDGRYLLSSSQDWKCILWDLKDGSRV-RTVRFEAPVYIAELHPYNHL--L 123
Query: 126 CLACPLSSAPMIVDLSTGST--SILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNK 183
+A P++VD+S+ ILP A P A APS + AA K
Sbjct: 124 FVASLFEDQPVLVDISSPKPVKRILPSA-PFRA---APSKDEEIDPAVA--AKQAAQDAK 177
Query: 184 YGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLT-NSNDRTIRI 242
+ V + + G ++ I ++ I + LL SN R + +
Sbjct: 178 HSTCVTIFTALGNHIIAGTSKGWIN-IIETQTCTTIHSTKLCAGVIILLRLASNGRDLLV 236
Query: 243 YDNLLPLKNGLEALVDIEK-GI-AEPNGIEKMKMVGSKCLALFREFQDSITKMHWKAPCF 300
+ ++ L + D+ + GI EP I+ L + +FQD + ++ W F
Sbjct: 237 NSSDRVIRTIL--MPDLSQLGIDLEPTNIK---------LQVEHKFQDVVNRLSWNHVAF 285
Query: 301 SGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDLAWHPVHPIIVSVSL-TG 358
S GE+V A + + IY+W+R+ G LVKILEGP+E L + WHP P +V+ L +G
Sbjct: 286 SSTGEFVTASTFMNPD--IYVWERSHGSLVKILEGPREELGVVEWHPTRPFVVACGLESG 343
Query: 359 WVYIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXXFDLNTETEKVKESNVN-EDEEVDIV 417
+Y W+ + WSA APDF FD++ E++ + ++ EDEE D++
Sbjct: 344 CIYTWSIVTPQKWSALAPDFGEVEENVIYVEREDEFDIHP-AEEIHQRRLDAEDEEPDVL 402
Query: 418 AVDKDAFSD 426
++ D
Sbjct: 403 TIEPSKSGD 411
Score = 291 (107.5 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 81/251 (32%), Positives = 128/251 (50%)
Query: 1 MNAPIIDP--LQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIA 58
MN ++DP L D+P+ + E L G C+ FNR+G LA+G DG+ VI+D ET G+A
Sbjct: 1 MNLSLVDPFVLAQDYPDTLSEKLRSGHATCLRFNRKGDYLASGRVDGTVVIFDVETNGVA 60
Query: 59 KELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQ-ARLH 117
++L+ + I S+ WS+ G +L S+ D LWD+ G ++ R V + P+ A LH
Sbjct: 61 RKLKGH--IRQIQSLSWSRDGRYLLSSSQDWKCILWDLKDGSRV-RTVRFEAPVYIAELH 117
Query: 118 PGSSTPSLCLACPLSSAPMIVDLSTGST--SILPIA----VPDVANGIAPSSRNKYSDGT 171
P + L +A P++VD+S+ ILP A P I P+ K +
Sbjct: 118 PYNHL--LFVASLFEDQPVLVDISSPKPVKRILPSAPFRAAPSKDEEIDPAVAAKQAAQD 175
Query: 172 PPFTPTAACFNKYGDLVYVGNSKGEILVIDHKS-NQIRALVPVSGAAVIKNIVFSRNGQY 230
+ F G+ + G SKG I +I+ ++ I + +G ++ + + NG+
Sbjct: 176 AKHSTCVTIFTALGNHIIAGTSKGWINIIETQTCTTIHSTKLCAGVIILLRL--ASNGRD 233
Query: 231 LLTNSNDRTIR 241
LL NS+DR IR
Sbjct: 234 LLVNSSDRVIR 244
>FB|FBgn0036972 [details] [associations]
symbol:CG6434 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0046427 "positive
regulation of JAK-STAT cascade" evidence=IMP] InterPro:IPR001680
InterPro:IPR015943 SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10
GO:GO:0046427 GeneTree:ENSGT00530000064100 RefSeq:NP_649208.1
UniGene:Dm.20125 ProteinModelPortal:Q9VWB6 SMR:Q9VWB6 STRING:Q9VWB6
PRIDE:Q9VWB6 EnsemblMetazoa:FBtr0074844 GeneID:40238
KEGG:dme:Dmel_CG6434 UCSC:CG6434-RA FlyBase:FBgn0036972
InParanoid:Q9VWB6 PhylomeDB:Q9VWB6 GenomeRNAi:40238 NextBio:817727
ArrayExpress:Q9VWB6 Bgee:Q9VWB6 Uniprot:Q9VWB6
Length = 211
Score = 145 (56.1 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEAL 339
++ QD + K WK CFSGDGE++ AGSA +H +YIW+++ G LVKIL G K L
Sbjct: 115 QKLQDLVNKTTWKKCCFSGDGEYICAGSAR--QHALYIWEKSIGNLVKILHGTKGEL 169
Score = 145 (56.1 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 179 ACFNKYGDLVYVGNSKGEILVIDHKSNQI----RALVPVSGAAVIKNIVFSRNGQYLLTN 234
A F++ G +Y GN+KG+ILV+D ++ ++ R +V S A +K+I F+R G L N
Sbjct: 29 ASFDRRGKHIYTGNAKGKILVLDAETFEVVASFRIIVGTSSATAVKSIEFARRGDAFLIN 88
Query: 235 SNDRTIRIYDN 245
++DR IR+YD+
Sbjct: 89 TSDRVIRVYDS 99
Score = 71 (30.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 18/76 (23%), Positives = 38/76 (50%)
Query: 24 GVMKCIA-FNRRGTLLAAGCSDGSCVIWDFETRGIAKELR---DKECVAAITSVCWSKYG 79
G + +A F+RRG + G + G ++ D ET + R A+ S+ +++ G
Sbjct: 23 GDLNIVASFDRRGKHIYTGNAKGKILVLDAETFEVVASFRIIVGTSSATAVKSIEFARRG 82
Query: 80 HRILVSAADKSLTLWD 95
L++ +D+ + ++D
Sbjct: 83 DAFLINTSDRVIRVYD 98
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 94 (38.1 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSN 236
TA + G V++G G I + D ++N ++ +I ++ S++G LL+NS
Sbjct: 181 TAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLK-GHKDIITSLAISKDGSSLLSNSM 239
Query: 237 DRTIRIYD 244
D T+RI+D
Sbjct: 240 DNTVRIFD 247
Score = 89 (36.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKE-CVAAITSVCWSKYGHRILVSAADK 89
F+ G+ A+G D ++W+ G K C AIT + WS+ + S++D
Sbjct: 58 FDPSGSYFASGGMDRQILLWN--VFGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDT 115
Query: 90 SLTLWDVLKGEKITR 104
L WD + G+KI +
Sbjct: 116 HLMSWDAVSGQKIRK 130
Score = 72 (30.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 300 FSGDGEWVIAGSASKGEHKIYIWDRAGYLVKILEGPKEALIDLAWHPVHPIIVSVSLTGW 359
+S + +V AGS+ K +Y+W G L +L G + ++ + +HP II+S S
Sbjct: 277 WSRNSRFVGAGSSDKN---VYVWSATGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSDRT 333
Query: 360 VYI 362
+++
Sbjct: 334 IFL 336
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 114 (45.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 17 IEEYLEHG--VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVC 74
I++ EH V C R L+ +G DG+ +WD RG + DK IT+V
Sbjct: 131 IKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKY---QITAVS 187
Query: 75 WSKYGHRILVSAADKSLTLWDVLKGE 100
+S +I D + +WD+ KGE
Sbjct: 188 FSDAADKIFTGGVDNDVKVWDLRKGE 213
Score = 96 (38.9 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRILVSAADK 89
FN GTL+A+G D +W G K K AI + W+ G +I+ ++ DK
Sbjct: 61 FNPAGTLIASGSHDREIFLW--RVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDK 118
Query: 90 SLTLWDVLKGEKITRI 105
++ WDV G++I ++
Sbjct: 119 TVRAWDVETGKQIKKM 134
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 277 SKCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGY-LVKILEGP 335
++C+ +F Q + K K +S DG V AGS+ + ++IWD + L G
Sbjct: 258 NRCVKIFEGHQHNFEKNLLKCS-WSPDGTKVTAGSSDR---MVHIWDTTSRRTIYKLPGH 313
Query: 336 KEALIDLAWHPVHPIIVSVSLTGWVYI 362
++ + +HP PII S S +Y+
Sbjct: 314 TGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 73 (30.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAA-VIKNIVFSRNGQYLLTNS 235
TA F+ D ++ G ++ V D + + A + + G I + S +G YLLTN
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGE--ATMTLEGHQDTITGMSLSPDGSYLLTNG 241
Query: 236 NDRTIRIYD 244
D + ++D
Sbjct: 242 MDNKLCVWD 250
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 93 (37.8 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 278 KCLALFR----EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGY-LVKIL 332
+C+ +F+ F+ ++ + W A DG + AGSA + +YIWD +V L
Sbjct: 262 RCVKIFQGNVHNFEKNLLRCSWSA-----DGSKIAAGSADRF---VYIWDTTTRRIVYKL 313
Query: 333 EGPKEALIDLAWHPVHPIIVSVSLTGWVYI 362
G ++ ++A+HP PI++S S +YI
Sbjct: 314 PGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
Score = 83 (34.3 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FN D + G +I V D + N++ + G +V + S +G YLL+NS D ++
Sbjct: 191 FNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVT-GLSLSADGSYLLSNSMDNSV 249
Query: 241 RIYD 244
R++D
Sbjct: 250 RVWD 253
Score = 75 (31.5 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRIL 83
G + + +N G+LL + +D + +WD ET K L+ + + S ++ G ++
Sbjct: 100 GAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGH--TSFVNSCFPARRGPQLA 157
Query: 84 VSAADK-SLTLWDVLK 98
+ +D ++ LWD+ K
Sbjct: 158 CTGSDDGTVKLWDIRK 173
Score = 70 (29.7 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRI 82
G + C F+ G LA+ D ++W+ G + K A+ + ++ G +
Sbjct: 57 GEVYCCKFHPNGATLASSGYDRLILMWN--VYGDCENYATLKGHSGAVMELHYNTDGSLL 114
Query: 83 LVSAADKSLTLWDVLKGEKITRI 105
++ DK++ +WD GE++ R+
Sbjct: 115 FSASTDKTVCVWDSETGERVKRL 137
Score = 68 (29.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 33 RRGTLLAA-GCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADKSL 91
RRG LA G DG+ +WD + ++ V ++T ++ +I+ D +
Sbjct: 151 RRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVT---FNDTSDQIISGGIDNDI 207
Query: 92 TLWDVLKGEKI 102
+WD+ + + I
Sbjct: 208 KVWDLRQNKLI 218
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 92 (37.4 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 278 KCLALFR----EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-L 332
+C+ +F+ F+ ++ + W S DG + AGSA + +Y+WD + L
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCSW-----SPDGSKIAAGSADRF---VYVWDTTSRRILYKL 323
Query: 333 EGPKEALIDLAWHPVHPIIVSVSLTGWVYI 362
G ++ ++A+HP PII+S S +Y+
Sbjct: 324 PGHAGSINEVAFHPDEPIIISASSDKRLYM 353
Score = 84 (34.6 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSND 237
A FN D + G +I V D + N++ + A + + S G YLL+N+ D
Sbjct: 198 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSVTGLSLSSEGSYLLSNAMD 256
Query: 238 RTIRIYD 244
T+R++D
Sbjct: 257 NTVRVWD 263
Score = 77 (32.2 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 25 VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILV 84
V C R L+ G DG+ +WD + + ++ V A+T ++ +I+
Sbjct: 154 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVT---FNDTSDQIIS 210
Query: 85 SAADKSLTLWDVLKGEKIT 103
D + +WD L+ K+T
Sbjct: 211 GGIDNDIKVWD-LRQNKLT 228
Score = 73 (30.8 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRI 82
G + C F+ G+ LA+ D ++W+ G K A+ + ++ G +
Sbjct: 67 GEVYCCKFHPNGSTLASAGFDRLILLWN--VYGDCDNYATLKGHSGAVMELHYNTDGSML 124
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSL 125
++ DK++ +WD GE++ R+ T +P P L
Sbjct: 125 FSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQL 166
Score = 72 (30.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+ FN + +G D +WD + +R ++T + S G +L +A D
Sbjct: 199 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH--ADSVTGLSLSSEGSYLLSNAMD 256
Query: 89 KSLTLWDV 96
++ +WDV
Sbjct: 257 NTVRVWDV 264
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 91 (37.1 bits), Expect = 7.0e-09, Sum P(3) = 7.0e-09
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 278 KCLALFR----EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-L 332
+C+ +F+ F+ ++ + W S DG + AGSA + +Y+WD V L
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSW-----SPDGSKIAAGSADRF---VYVWDTTSRRVLYKL 324
Query: 333 EGPKEALIDLAWHPVHPIIVSVSLTGWVYI 362
G ++ ++A+HP PII+S S +Y+
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Score = 84 (34.6 bits), Expect = 7.0e-09, Sum P(3) = 7.0e-09
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSND 237
A FN D + G +I V D + N++ + A + + S G YLL+N+ D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 238 RTIRIYD 244
T+R++D
Sbjct: 258 NTVRVWD 264
Score = 78 (32.5 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 25 VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILV 84
V C R L+ G DG+ +WD + + ++ V A+T ++ +I+
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVT---FNDTSDQIIS 211
Query: 85 SAADKSLTLWDVLKGEKIT 103
D + +WD L+ K+T
Sbjct: 212 GGIDNDIKVWD-LRQNKLT 229
Score = 73 (30.8 bits), Expect = 7.0e-09, Sum P(3) = 7.0e-09
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRI 82
G + C F+ G+ LA+ D ++W+ G K A+ + ++ G +
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDRLILLWN--VYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSL 125
++ DK++ +WD GE++ R+ T +P P L
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQL 167
Score = 72 (30.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+ FN + +G D +WD + +R ++T + S G +L +A D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH--ADSVTGLSLSSEGSYLLSNAMD 257
Query: 89 KSLTLWDV 96
++ +WDV
Sbjct: 258 NTVRVWDV 265
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 90 (36.7 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 278 KCLALFR----EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-L 332
+C+ +F+ F+ ++ + W S DG + AGSA + +Y+WD + L
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSW-----SPDGSKIAAGSADRF---VYVWDTTSRRILYKL 324
Query: 333 EGPKEALIDLAWHPVHPIIVSVSLTGWVYI 362
G ++ ++A+HP PII+S S +Y+
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Score = 84 (34.6 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSND 237
A FN D + G +I V D + N++ + A + + S G YLL+N+ D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 238 RTIRIYD 244
T+R++D
Sbjct: 258 NTVRVWD 264
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 25 VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILV 84
V C R L+ G DG+ +WD + + ++ V A+T ++ +I+
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVT---FNDTSDQIIS 211
Query: 85 SAADKSLTLWDVLKGEKIT 103
D + +WD L+ K+T
Sbjct: 212 GGIDNDIKVWD-LRQNKLT 229
Score = 73 (30.8 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRI 82
G + C F+ G+ LA+ D ++W+ G K A+ + ++ G +
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDRLILLWN--VYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSL 125
++ DK++ +WD GE++ R+ T +P P L
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQL 167
Score = 72 (30.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+ FN + +G D +WD + +R ++T + S G +L +A D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH--ADSVTGLSLSSEGSYLLSNAMD 257
Query: 89 KSLTLWDV 96
++ +WDV
Sbjct: 258 NTVRVWDV 265
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 90 (36.7 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 278 KCLALFR----EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-L 332
+C+ +F+ F+ ++ + W S DG + AGSA + +Y+WD + L
Sbjct: 273 RCVRIFQGNVHNFEKNLLRCSW-----SPDGSKIAAGSADRF---VYVWDTTSRRILYKL 324
Query: 333 EGPKEALIDLAWHPVHPIIVSVSLTGWVYI 362
G ++ ++A+HP PII+S S +Y+
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Score = 84 (34.6 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSND 237
A FN D + G +I V D + N++ + A + + S G YLL+N+ D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 238 RTIRIYD 244
T+R++D
Sbjct: 258 NTVRVWD 264
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 25 VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILV 84
V C R L+ G DG+ +WD + + ++ V A+T ++ +I+
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVT---FNDTSDQIIS 211
Query: 85 SAADKSLTLWDVLKGEKIT 103
D + +WD L+ K+T
Sbjct: 212 GGIDNDIKVWD-LRQNKLT 229
Score = 73 (30.8 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRI 82
G + C F+ G+ LA+ D ++W+ G K A+ + ++ G +
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDRLILLWN--VYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSL 125
++ DK++ +WD GE++ R+ T +P P L
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQL 167
Score = 72 (30.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+ FN + +G D +WD + +R ++T + S G +L +A D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH--ADSVTGLSLSSEGSYLLSNAMD 257
Query: 89 KSLTLWDV 96
++ +WDV
Sbjct: 258 NTVRVWDV 265
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 90 (36.7 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 278 KCLALFR----EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-L 332
+C+ +F+ F+ ++ + W S DG + AGSA + +Y+WD + L
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSW-----SPDGSKIAAGSADRF---VYVWDTTSRRILYKL 324
Query: 333 EGPKEALIDLAWHPVHPIIVSVSLTGWVYI 362
G ++ ++A+HP PII+S S +Y+
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Score = 84 (34.6 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSND 237
A FN D + G +I V D + N++ + A + + S G YLL+N+ D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 238 RTIRIYD 244
T+R++D
Sbjct: 258 NTVRVWD 264
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 25 VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILV 84
V C R L+ G DG+ +WD + + ++ V A+T ++ +I+
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVT---FNDTSDQIIS 211
Query: 85 SAADKSLTLWDVLKGEKIT 103
D + +WD L+ K+T
Sbjct: 212 GGIDNDIKVWD-LRQNKLT 229
Score = 73 (30.8 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRI 82
G + C F+ G+ LA+ D ++W+ G K A+ + ++ G +
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDRLILLWN--VYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSL 125
++ DK++ +WD GE++ R+ T +P P L
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQL 167
Score = 72 (30.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+ FN + +G D +WD + +R ++T + S G +L +A D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH--ADSVTGLSLSSEGSYLLSNAMD 257
Query: 89 KSLTLWDV 96
++ +WDV
Sbjct: 258 NTVRVWDV 265
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 130 (50.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/169 (27%), Positives = 84/169 (49%)
Query: 211 VPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYD----NLLPLKNGLEA-LVDIE----- 260
V SG I+++ FS +G+YL T + D+ IR++D + + +G E + ++
Sbjct: 311 VDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNG 370
Query: 261 KGIAEPNGIEKMKM--VGSKCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHK 318
+ IA +G + +++ + L +D +T + S DG +V AGS K
Sbjct: 371 RYIASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTV-----AMSPDGLYVAAGSLDK---T 422
Query: 319 IYIWDRA-GYLVKILEGP---KEALIDLAWHPVHPIIVSVSLTGWVYIW 363
+ +WD GYLV+ LE P K+++ +A+ P +VS SL + +W
Sbjct: 423 VRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLW 471
Score = 106 (42.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 15 EVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFET-RGIA---KELRDKECVAAI 70
E++ + V+ C+ F+R G LA GC+ S I+D + +A E DK I
Sbjct: 261 ELVHHLVHDSVVCCVRFSRDGKYLATGCNR-SAQIFDVTLGQNVAVLQDESVDKSGDLYI 319
Query: 71 TSVCWSKYGHRILVSAADKSLTLWDV 96
SVC+S G + A DK + +WD+
Sbjct: 320 RSVCFSPDGKYLATGAEDKQIRVWDI 345
Score = 94 (38.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 26 MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
++ + F+ G LA G D +WD TR I E I S+ ++ G I
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHE--QDIYSLDFAGNGRYIASG 376
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQARLHP 118
+ DK++ LWD+ +G+ + + ++ + P
Sbjct: 377 SGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSP 409
Score = 89 (36.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 276 GSKCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEG 334
G KC F +D + + C + DG WV++GS +G + WD G +L+G
Sbjct: 486 GGKCHRTFEGHKDFVLSV-----CLTPDGHWVMSGSKDRG---VQFWDPITGNAQMMLQG 537
Query: 335 PKEALIDLAWHPVHPIIVSVSLTGWVYIW 363
K ++I +A P + + S IW
Sbjct: 538 HKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 82 (33.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 21 LEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA-AITSVCWSKYG 79
+E GV +A + G +AAG D + +WD T + + L + + ++ SV ++ G
Sbjct: 398 IEDGVTT-VAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNG 456
Query: 80 HRILVSAADKSLTLWDV 96
++ + DK++ LW++
Sbjct: 457 KELVSGSLDKTIKLWEL 473
Score = 75 (31.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADKS 90
F G +A+G D + +WD + L ++ +T+V S G + + DK+
Sbjct: 366 FAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIED---GVTTVAMSPDGLYVAAGSLDKT 422
Query: 91 LTLWDVLKGEKITRI 105
+ +WD G + R+
Sbjct: 423 VRVWDTTTGYLVERL 437
Score = 58 (25.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 219 IKNIVFSRNGQYLLTNSNDRTIRIYDNLLP 248
+ ++ F+ NG+ L++ S D+TI++++ LP
Sbjct: 447 VYSVAFAPNGKELVSGSLDKTIKLWELNLP 476
Score = 39 (18.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 135 PMIVDL-STG--STSILPIAVPDVANGIAPSSRNKYSD 169
P++ L S+G TS LP+ + + G+ P+ ++ ++
Sbjct: 7 PLLTRLPSSGRAQTSQLPLTMYNAHRGMVPAPNSRLNE 44
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 100 (40.3 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 28/118 (23%), Positives = 52/118 (44%)
Query: 26 MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
++ + F+ G LA G D +WD TR I + E I S+ +++ G I
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHE--QDIYSLDFARDGRTIASG 406
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLACPLSSAPMIVDLSTG 143
+ D+++ LWD+ G +T ++ + P + + A L + + DL+ G
Sbjct: 407 SGDRTVRLWDIENGTALTVFTIEDGVTTVAISPDTKYVA---AGSLDKSVRVWDLTQG 461
Score = 94 (38.1 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 21 LEH-GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAA----ITSVCW 75
L+H V+ C+ F+ G +A GC+ S I+D T L+D I SVC+
Sbjct: 296 LQHESVVCCVRFSADGKYVATGCNR-SAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCF 354
Query: 76 SKYGHRILVSAADKSLTLWDV 96
S G + A DK + +WD+
Sbjct: 355 SPDGKYLATGAEDKQIRVWDI 375
Score = 91 (37.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 263 IAEPNG-IEKMKMVGSKCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYI 321
+A P G ++ G +C+ F +D + + + D +WV++GS +G +
Sbjct: 503 LATPRGNMQNQGSKGGRCVKTFEGHRDFVLSV-----ALTPDNQWVMSGSKDRG---VQF 554
Query: 322 WD-RAGYLVKILEGPKEALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTEN 370
WD R G +L+G K ++I +A P + S IW+ +N
Sbjct: 555 WDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYTRMDN 604
Score = 84 (34.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 168 SDGTPPFTPTAACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAV-IKNIVFSR 226
+D T + CF+ G + G +I V D + IR + +G I ++ F+R
Sbjct: 341 ADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIR--IQFAGHEQDIYSLDFAR 398
Query: 227 NGQYLLTNSNDRTIRIYDNLLPLKNGLEALV-DIEKGI 263
+G+ + + S DRT+R++D ++NG V IE G+
Sbjct: 399 DGRTIASGSGDRTVRLWD----IENGTALTVFTIEDGV 432
Score = 82 (33.9 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADKS 90
F R G +A+G D + +WD E G A + E +T+V S + + DKS
Sbjct: 396 FARDGRTIASGSGDRTVRLWDIEN-GTALTVFTIE--DGVTTVAISPDTKYVAAGSLDKS 452
Query: 91 LTLWDVLKGEKITRI 105
+ +WD+ +G + R+
Sbjct: 453 VRVWDLTQGCPVERL 467
Score = 74 (31.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 21 LEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKE-LRDKECVA-AITSVCWSKY 78
+E GV +A + +AAG D S +WD T+G E L + ++ SV +S
Sbjct: 428 IEDGVTT-VAISPDTKYVAAGSLDKSVRVWDL-TQGCPVERLEGPDGHKDSVYSVAFSPN 485
Query: 79 GHRILVSAADKSLTLWDV 96
G ++ + DK++ LW++
Sbjct: 486 GRDLVTGSLDKTIKLWEL 503
Score = 63 (27.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 219 IKNIVFSRNGQYLLTNSNDRTIRIYDNLLPLKN 251
+ ++ FS NG+ L+T S D+TI++++ P N
Sbjct: 477 VYSVAFSPNGRDLVTGSLDKTIKLWELATPRGN 509
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 73 VCWSKYGH--RILVSAADKSLTLWDVLKGEKITRIVLQ 108
VC ++ + + + ++S ++DV GEK+ VLQ
Sbjct: 302 VCCVRFSADGKYVATGCNRSAQIFDVNTGEKVC--VLQ 337
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 278 KCLALFR----EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-L 332
+C+ +F+ F+ ++ + W S DG + GSA + +Y+WD + L
Sbjct: 299 RCVKIFQGNVHNFEKNLLRCSW-----SPDGSKIAGGSADRF---VYVWDTTSRRILYKL 350
Query: 333 EGPKEALIDLAWHPVHPIIVSVSLTGWVYI 362
G ++ +LA+HP PII+S S +Y+
Sbjct: 351 PGHAGSVNELAFHPEEPIILSASSDKRLYM 380
Score = 85 (35.0 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSND 237
A FN D + G +I V D + N++ + A + + S G YLL+N+ D
Sbjct: 225 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSVTGLSLSSEGSYLLSNAMD 283
Query: 238 RTIRIYD 244
T+RI+D
Sbjct: 284 NTVRIWD 290
Score = 78 (32.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 25 VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILV 84
V C R L+ G DG+ +WD + + ++ V A+T ++ +I+
Sbjct: 181 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVT---FNDTSDQIIS 237
Query: 85 SAADKSLTLWDVLKGEKIT 103
D + +WD L+ K+T
Sbjct: 238 GGIDNDIKVWD-LRQNKLT 255
Score = 73 (30.8 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+ FN + +G D +WD + +R ++T + S G +L +A D
Sbjct: 226 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH--ADSVTGLSLSSEGSYLLSNAMD 283
Query: 89 KSLTLWDV 96
++ +WDV
Sbjct: 284 NTVRIWDV 291
Score = 69 (29.3 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 23/103 (22%), Positives = 43/103 (41%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRI 82
G + C F+ G LA+ D ++W+ G K A+ + ++ G +
Sbjct: 94 GEVYCCKFHPWGNTLASAGFDRLILLWN--VYGDCDNYATLKGHSGAVMELHYNTDGSML 151
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSL 125
++ DK++ +WD GE++ R+ T +P P L
Sbjct: 152 FSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQL 193
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 114 (45.2 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 49/206 (23%), Positives = 99/206 (48%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FN +L+ G+ I + + K+ + ++ I ++ F+R+G +++ S+D +
Sbjct: 136 FNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP-ISSVHFNRDGSLIVSASHDGSC 194
Query: 241 RIYDNLLPLKNG--LEALVDIEKGIA------EPNG-------IEKMKMVGSKCLALF-R 284
+I+D K G L+ L+D +K A PNG ++ + + F +
Sbjct: 195 KIWD----AKEGTCLKTLID-DKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLK 249
Query: 285 EFQDSITKMHWKAPCFS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDL 342
+ K+ FS +G+++++GS ++ +Y+WD +A +++ LEG +A+I +
Sbjct: 250 VYTGHTNKVFCITSAFSVTNGKYIVSGSE---DNCVYLWDLQARNILQRLEGHTDAVISV 306
Query: 343 AWHPVHPIIVSVS--LTGWVYIWAKD 366
+ HPV I S L + IW +D
Sbjct: 307 SCHPVQNEISSSGNHLDKTIRIWKQD 332
Score = 84 (34.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 2 NAPIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKEL 61
N PI P + + +E + + C+ F+ G LLA+ D + ++W +
Sbjct: 26 NVPIYKPYR--HLKTLEGHT--AAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY 81
Query: 62 RDKECVAAITSVCWSKYGHRILVSAADKSLTLWD 95
+ I+ + WS H ++ D +L +WD
Sbjct: 82 EGHS--SGISDLAWSSDSHYTCSASDDCTLRIWD 113
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 68 AAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITR 104
AAI+ V +S G+ + ++ DK++ LW I R
Sbjct: 44 AAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHR 80
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 102 (41.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 163 SRNKYSDGT--PPFTPTAACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAA-VI 219
+R K++ T PF TA CF G+ V G E+ + D + + L + G + I
Sbjct: 170 ARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV--LHHLRGHSDTI 227
Query: 220 KNIVFSRNGQYLLTNSNDRTIRIYDNLLPLKNGLEALVDIEKG 262
+ S G ++LTN+ D T+R++D + P G E V + +G
Sbjct: 228 TGMSLSPEGDFILTNAMDNTLRVWD-VRPYAPG-ERCVKVFQG 268
Score = 95 (38.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 23 HG-VMKCIAFNRRGT-LLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGH 80
HG + + +RRG LL +G D + IWD + A L E +T+VC+ G
Sbjct: 139 HGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTL---ESPFQVTAVCFGDTGE 195
Query: 81 RILVSAADKSLTLWDVLK 98
+++ D + +WD+ K
Sbjct: 196 QVISGGIDNEVKIWDIRK 213
Score = 69 (29.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 22/88 (25%), Positives = 44/88 (50%)
Query: 276 GSKCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEG 334
G +C+ +F+ Q + K + +S + + +GSA + H +YIWD ++ L G
Sbjct: 259 GERCVKVFQGHQHNFEKNLLRC-AWSPGSDKITSGSADR--H-VYIWDVNTRRILYKLPG 314
Query: 335 PKEALIDLAWHPVHPIIVSVSLTGWVYI 362
++ + + P P+I+S S +Y+
Sbjct: 315 HNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 61 (26.5 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 31 FNRRGTLLAAGCSDGSCVIWD-FETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADK 89
F+ G LL + D IW +E + A+ ++ G I + DK
Sbjct: 63 FHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHS--GAVMEAHFTPDGSHIFTCSTDK 120
Query: 90 SLTLWDVLKGEKITR 104
+L WD+ G++ R
Sbjct: 121 TLAFWDIATGQRQRR 135
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 84 (34.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSND 237
A FN D + G +I V D + N++ + A + + S G YLL+N+ D
Sbjct: 198 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSVTGLSLSSEGSYLLSNAMD 256
Query: 238 RTIRIYD 244
T+R++D
Sbjct: 257 NTVRVWD 263
Score = 80 (33.2 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 278 KCLALFR----EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-L 332
+C+ +F+ F+ ++ + W S DG + AGSA + +Y+WD + L
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCSW-----SPDGSKIAAGSADRF---VYVWDTTSRRILYKL 323
Query: 333 EGPKEALIDLAWHPVHPII 351
G ++ ++A+HP PII
Sbjct: 324 PGHAGSINEVAFHPDEPII 342
Score = 73 (30.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD-KECVAAITSVCWSKYGHRI 82
G + C F+ G+ LA+ D ++W+ G K A+ + ++ G +
Sbjct: 67 GEVYCCKFHPNGSTLASAGFDRLILLWN--VYGDCDNYATLKGHSGAVMELHYNTDGSML 124
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSL 125
++ DK++ +WD GE++ R+ T +P P L
Sbjct: 125 FSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQL 166
>UNIPROTKB|A8XEN7 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0008340 "determination
of adult lifespan" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008340 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:HE601540 ProteinModelPortal:A8XEN7
STRING:A8XEN7 EnsemblMetazoa:CBG11954 WormBase:CBG11954
Uniprot:A8XEN7
Length = 554
Score = 114 (45.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 178 AACFNKYG-DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKN---IVFSRNGQ-YLL 232
+ CF YG +L+Y G + V D ++ ++PV A ++ V SR + YLL
Sbjct: 295 SVCFADYGSNLIYSAGDDGLVKVWDKRAWSDGDVIPVGVFAGHRDGVTYVDSRQDERYLL 354
Query: 233 TNSNDRTIRIYD-NLLPLKNGLEAL---VDIE----KGIAEPNGIEKMKMVGSKCLALFR 284
+NS D+TI+++D + G+EA V + + P G+ + + G + R
Sbjct: 355 SNSKDQTIKVWDLRKFSCQGGVEATRACVQSQHWDYRWQPAPPGLCQ-PVQGDTSVMTLR 413
Query: 285 EFQDSITKMHWK-APCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDL 342
T + K +P +G ++ G A +GE I ++D G + + L+G + + +
Sbjct: 414 GHSVLHTLVRAKFSPENTGR-RFIYTGCA-RGE--IVVYDIVTGTVSRRLKGHQAVVREC 469
Query: 343 AWHPVHPIIVSVSLTGWVYIWAKD 366
WHP IVS S G +W D
Sbjct: 470 DWHPQENEIVSTSWDGVTTVWTWD 493
Score = 83 (34.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 25/89 (28%), Positives = 42/89 (47%)
Query: 13 FPEVIEEYLEHGVMK-----CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECV 67
FP I+ + EH V C+ F+ + G S+ S ++D E R + + +
Sbjct: 234 FP--IDWHGEHAVQNQCAVFCVRFSDDSEQIVCGTSEYSIHVFDVEQRRRIRTIVNAH-E 290
Query: 68 AAITSVCWSKYGHRILVSAADKSLT-LWD 95
+ SVC++ YG ++ SA D L +WD
Sbjct: 291 DDVNSVCFADYGSNLIYSAGDDGLVKVWD 319
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 111 (44.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAA 87
C++FN + TL+A G D + +WD + LR A I S+ ++ G RI+ +
Sbjct: 182 CLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHS--AEIISLSFNTSGDRIITGSF 239
Query: 88 DKSLTLWDVLKGEKITRIV 106
D ++ +WD G K+ ++
Sbjct: 240 DHTVVVWDADTGRKVNILI 258
Score = 101 (40.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 43/197 (21%), Positives = 87/197 (44%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FN GD + G+ ++V D + + + + + A I + F+ + +LT S D+T
Sbjct: 227 FNTSGDRIITGSFDHTVVVWDADTGR-KVNILIGHCAEISSASFNWDCSLILTGSMDKTC 285
Query: 241 RIYD----NLLPLKNG-----LEALVDIEKGI---AEPNGIEKMKMVGS-KCLALFREFQ 287
+++D + G L++ D + A +G ++ + KC+A +
Sbjct: 286 KLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHE 345
Query: 288 DSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHP 346
I+K+ F+ G ++ GS+ K IWD + G +++LEG + + A++
Sbjct: 346 GEISKIS-----FNPQGNHLLTGSSDKTAR---IWDAQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 347 VHPIIVSVSLTGWVYIW 363
I+++ S IW
Sbjct: 398 KGNIVITGSKDNTCRIW 414
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 7 DPLQGDFPEVIEEYLEHGVMKCIAFNRR-GTLLAAGCSDGSCVIWDFETRGIAKELRDKE 65
D G+ +E + V+ IAFN G +A G D +C +W ET R
Sbjct: 120 DTASGEELNTLEGH--RNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGH- 176
Query: 66 CVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKI 102
A I + ++ + + D + LWD+ GE++
Sbjct: 177 -TAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEV 212
Score = 86 (35.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
++FN G + G D + V+WD +T G + C A I+S ++ IL + D
Sbjct: 225 LSFNTSGDRIITGSFDHTVVVWDADT-GRKVNILIGHC-AEISSASFNWDCSLILTGSMD 282
Query: 89 KSLTLWDVLKGEKITRI 105
K+ LWD G+ + +
Sbjct: 283 KTCKLWDATNGKCVATL 299
Score = 80 (33.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 179 ACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSG-AAVIKNIVFSRNGQYLLTNSND 237
+CF+ G L+ ++ G + + + + + G I I F+ G +LLT S+D
Sbjct: 309 SCFDYTGKLIATASADGTARIFSAATR--KCIAKLEGHEGEISKISFNPQGNHLLTGSSD 366
Query: 238 RTIRIYD 244
+T RI+D
Sbjct: 367 KTARIWD 373
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 96 (38.9 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 24/91 (26%), Positives = 48/91 (52%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+A++ +G L+A+ D + IW+ + RG++ E A+ SV + GH +L ++ D
Sbjct: 66 VAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHS--KAVRSVDFDSTGHLMLTASDD 123
Query: 89 KSLTLWDVLKGEKITRIVLQQTPLQ-ARLHP 118
KS +W V + + ++ Q ++ A+ P
Sbjct: 124 KSAKIWRVARRQFVSSFAQQNNWVRSAKFSP 154
Score = 94 (38.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 176 PTAACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNS 235
P ++ +G+++ V I + D +Q+ L V A V ++ F +G +LL+ S
Sbjct: 189 PRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPV-NDVAFHPSGHFLLSGS 247
Query: 236 NDRTIRIYDNL 246
+DRTIRI D L
Sbjct: 248 DDRTIRILDLL 258
Score = 81 (33.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/95 (23%), Positives = 45/95 (47%)
Query: 9 LQGDF--PEVIEEYLEH-GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKE 65
+QG F P + + H G + + F G +A +D + ++W+ A+ +R
Sbjct: 1 MQGLFRDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQA--ARCIRFAS 58
Query: 66 CVAAITSVCWSKYGHRILVSAADKSLTLWDV-LKG 99
A + V WS G+ + + D+++ +W+ L+G
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRG 93
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 111 (44.1 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAA 87
C++FN + T++A G D + +WD ++ L +A I S+ + G RI+ +
Sbjct: 182 CLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGH--LAEIISLSFDTSGDRIITGSF 239
Query: 88 DKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLACPLSSAPMIVDLSTG 143
D ++ +WD G K+ ++ + + L S SL L + M+ D ++G
Sbjct: 240 DHTVVVWDASTGRKVHTLIGHCAEISSALF--SWDCSLILTGSMDKTCMLWDATSG 293
Score = 90 (36.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 42/197 (21%), Positives = 84/197 (42%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
F+ GD + G+ ++V D + + + + A I + +FS + +LT S D+T
Sbjct: 227 FDTSGDRIITGSFDHTVVVWDASTGR-KVHTLIGHCAEISSALFSWDCSLILTGSMDKTC 285
Query: 241 RIYD----NLLPLKNG-----LEALVDIEKGI---AEPNGIEKM-KMVGSKCLALFREFQ 287
++D + G L++ D + A +G ++ KC+ +
Sbjct: 286 MLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHE 345
Query: 288 DSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHP 346
I+K+ F+ G ++ GS+ K IWD + G +++LEG + + A++
Sbjct: 346 GEISKIS-----FNPQGNRLLTGSSDKTAR---IWDVQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 347 VHPIIVSVSLTGWVYIW 363
I+++ S IW
Sbjct: 398 KGNIVITGSKDNSCRIW 414
Score = 87 (35.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 7 DPLQGDFPEVIEEYLEHGVMKCIAFNRR-GTLLAAGCSDGSCVIWDFETRGIAKELRDKE 65
D G+ +E + V+ IAFN G +A G D +C +W ET R
Sbjct: 120 DTASGEELHTLEGH--RNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGH- 176
Query: 66 CVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRI 105
A I + ++ + + D + LWD+ GE++ +
Sbjct: 177 -TAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL 215
Score = 78 (32.5 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 179 ACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSG-AAVIKNIVFSRNGQYLLTNSND 237
+CF+ G L+ ++ G V + + + + + G I I F+ G LLT S+D
Sbjct: 309 SCFDYTGKLIATASADGTARV--YNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSD 366
Query: 238 RTIRIYD 244
+T RI+D
Sbjct: 367 KTARIWD 373
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 109 (43.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 46/203 (22%), Positives = 90/203 (44%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FN +L+ G+ + + D ++ + +P V + F+R+G ++++S D
Sbjct: 164 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLC 222
Query: 241 RIYDNLLPLKNGLEALVDIEKGIAE-----PNGIEKMKMVGSKCLALFREFQDSITKMHW 295
RI+D L+ L+D + PNG + L L+ + K +
Sbjct: 223 RIWDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 280
Query: 296 ----KAPC----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWH 345
+ C FS G+W+++GS ++ +YIW+ ++ +V+ L+G + ++ A H
Sbjct: 281 GHKNEKYCIFANFSVTGGKWIVSGSE---DNMVYIWNLQSKEVVQKLQGHTDTVLCTACH 337
Query: 346 PVHPIIVSVSLTG--WVYIWAKD 366
P II S +L + +W D
Sbjct: 338 PTENIIASAALENDKTIKLWKSD 360
Score = 75 (31.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 26 MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+ + F+ G LA+ +D IW K + + I+ V WS R+LVS
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS-DSRLLVS 131
Query: 86 AAD-KSLTLWDVLKGEKI 102
+D K+L +W++ G+ +
Sbjct: 132 GSDDKTLKVWELSTGKSL 149
Score = 50 (22.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDVLKGE 100
A+++V +S G + S+ADK + +W G+
Sbjct: 74 AVSAVKFSPNGEWLASSSADKLIKIWGAYDGK 105
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 103 (41.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 25/96 (26%), Positives = 49/96 (51%)
Query: 5 IIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDK 64
I DP G+ + ++ + G ++ +AF+ G LLA+G D + +WD T + +
Sbjct: 776 IWDPATGELLQTLDGH--SGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGH 833
Query: 65 ECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGE 100
+I SV ++ G + ++ D ++ +WD+ GE
Sbjct: 834 P--HSIWSVAFAPDGKELASASDDSTIKIWDLATGE 867
Score = 96 (38.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 15 EVIEEYLEHGV-MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSV 73
E+ + + H + ++ +AF+ G L +G D + +WD T + + L D ++ +V
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHS--RSVHAV 1050
Query: 74 CWSKYGHRILVSAADKSLTLWDVLKGE 100
+S ++ S+ D ++ LWD GE
Sbjct: 1051 AFSPDDKQLASSSLDSTIKLWDSATGE 1077
Score = 95 (38.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 58/237 (24%), Positives = 106/237 (44%)
Query: 139 DLSTGSTSI-LPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGDLVYVGNSKGEI 197
D S+S+ I + D A G + +S G T F+ G L+ + G I
Sbjct: 1056 DKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVT-----FSPDGKLLASNSYDGTI 1110
Query: 198 LVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL-PLKNGLEAL 256
+ + + +++ + + + ++ FS +G+ L + D TI+++D+ L LE
Sbjct: 1111 KLWNPLTGELQQTL-TGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGH 1169
Query: 257 VD-IEKGIAEPNGIEKMKMVGS--KCLALFREFQDSITKM---H--W-KAPCFSGDGEWV 307
D I+ + P+G K+ GS + L+ + ++ H W ++ FS DG+
Sbjct: 1170 SDRIQSVVFSPDG--KLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGK-- 1225
Query: 308 IAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDLAWHPVHPIIVSVSLTGWVYIW 363
+ S+S GE I +WD G L++ L P E+ +A+ P + SV + IW
Sbjct: 1226 LLASSSYGE-TIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD-TKIW 1280
Score = 94 (38.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 42/197 (21%), Positives = 92/197 (46%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSG-AAVIKNIVFSRNGQYLLTNSN 236
+ F+ G + G+ K + + + + ++ L + G + ++++ FS +G+ L ++S+
Sbjct: 923 SVAFSPDGKKLASGSEKNTVKLWNPATGEL--LQTLEGHSQSVRSVAFSPDGKQLASSSS 980
Query: 237 DRTIRIYDNLL-PLKNGLEALVDIEKGIA-EPNGIEKMKMVGSKCLALF----REFQDSI 290
D TI+++++ L+ + + +A P+G + + L+ E Q S+
Sbjct: 981 DTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSL 1040
Query: 291 TKMHWK---APCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDLAWHP 346
H + A FS D + + + S + I +WD A G L + LEG + + + + P
Sbjct: 1041 ED-HSRSVHAVAFSPDDKQLASSSL---DSTIKLWDSATGELQRTLEGHSQGVRSVTFSP 1096
Query: 347 VHPIIVSVSLTGWVYIW 363
++ S S G + +W
Sbjct: 1097 DGKLLASNSYDGTIKLW 1113
Score = 92 (37.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 7 DPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKEC 66
+P G+ + +E G +K +AF+ G LA+G + +W+ T + + L
Sbjct: 904 NPATGELQQSLEG--RSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHS- 960
Query: 67 VAAITSVCWSKYGHRILVSAADKSLTLWDVLKGE 100
++ SV +S G ++ S++D ++ LW+ GE
Sbjct: 961 -QSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE 993
Score = 86 (35.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 7 DPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKEC 66
D G+ + E + H + +AF G LA+ D + IWD T G ++ D
Sbjct: 820 DSATGELLQTFEGH-PHSIWS-VAFAPDGKELASASDDSTIKIWDLAT-GELQQTLDSHS 876
Query: 67 VAAITSVCWSKYGHRILVSAADKSLTLWDVLKGE 100
++ SV +S G + S+ D ++ +W+ GE
Sbjct: 877 -QSVRSVAFSPDGKLLASSSLDSTIKVWNPATGE 909
Score = 81 (33.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 15 EVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVC 74
+ +E +L G ++ + F+ G L +G D + IWD T + + L + S+
Sbjct: 744 QTLENHL--GPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHS--GTVESLA 799
Query: 75 WSKYGHRILVSAADKSLTLWDVLKGE 100
+S G + + D ++ LWD GE
Sbjct: 800 FSPDGKLLASGSYDNTIDLWDSATGE 825
Score = 80 (33.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 21/96 (21%), Positives = 46/96 (47%)
Query: 5 IIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDK 64
I D G+ + ++ + + ++ +AF+ G LLA+ D + +W+ T + + L +
Sbjct: 860 IWDLATGELQQTLDSHSQS--VRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGR 917
Query: 65 ECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGE 100
+ SV +S G ++ + ++ LW+ GE
Sbjct: 918 S--GWVKSVAFSPDGKKLASGSEKNTVKLWNPATGE 951
Score = 71 (30.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 36/156 (23%), Positives = 71/156 (45%)
Query: 219 IKNIVFSRNGQYLLTNSNDRTIRIYDNLLPLKNGLEALVDIEKGIAEPNGIEKMKMVGSK 278
I+ + FS +G++L++ S+D TI+++D L ++L D + + K + S
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWD--LATSELQQSLEDHSRSVHAVAFSPDDKQLASS 1062
Query: 279 CLALFREFQDSIT-------KMHW---KAPCFSGDGEWVIAGSASKGEHKIYIWDR-AGY 327
L + DS T + H ++ FS DG+ ++A ++ G K+ W+ G
Sbjct: 1063 SLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGK-LLASNSYDGTIKL--WNPLTGE 1119
Query: 328 LVKILEGPKEALIDLAWHPVHPIIVSVSLTGWVYIW 363
L + L G + + +A+ P + S + +W
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLW 1155
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 127 (49.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 58/205 (28%), Positives = 91/205 (44%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FN LV G+ + + D K+ +P V + F+R+G + + S D +
Sbjct: 179 FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPV-SAVSFNRDGSLIASGSYDGLV 237
Query: 241 RIYDNLLPLKNG--LEALVDIEKG-IA----EPNGIEKMKMVGSKCLALFREFQDSITKM 293
RI+D NG ++ LVD E +A PNG + L L+ + K
Sbjct: 238 RIWDTA----NGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ 293
Query: 294 ---HWKAP-C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLA 343
H + C FS G+W+I+GS + KIYIW+ + +V+ LEG + ++
Sbjct: 294 YTGHENSKYCIFANFSVTGGKWIISGSE---DCKIYIWNLQTREIVQCLEGHTQPVLASD 350
Query: 344 WHPVHPIIVSVSLT--GWVYIWAKD 366
HPV II S +L ++IW D
Sbjct: 351 CHPVQNIIASGALEPDNKIHIWRSD 375
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 26 MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+ ++FNR G+L+A+G DG IWD K L D E + V +S G IL S
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN-PPVAFVKFSPNGKYILAS 274
Query: 86 AADKSLTLWDVLKGEKI 102
D +L LWD KG+ +
Sbjct: 275 NLDSTLKLWDFSKGKTL 291
Score = 55 (24.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 16/68 (23%), Positives = 33/68 (48%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD-K 89
F+ G L +D + IW+ + + L + + + WS R +VSA+D K
Sbjct: 95 FSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL--GVNDIAWSS-DSRCVVSASDDK 151
Query: 90 SLTLWDVL 97
+L +++++
Sbjct: 152 TLKIFEIV 159
Score = 46 (21.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDV 96
+I+S +S G + S+ADK++ +W++
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNM 116
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 127 (49.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 58/205 (28%), Positives = 91/205 (44%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FN LV G+ + + D K+ +P V + F+R+G + + S D +
Sbjct: 179 FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPV-SAVSFNRDGSLIASGSYDGLV 237
Query: 241 RIYDNLLPLKNG--LEALVDIEKG-IA----EPNGIEKMKMVGSKCLALFREFQDSITKM 293
RI+D NG ++ LVD E +A PNG + L L+ + K
Sbjct: 238 RIWDTA----NGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ 293
Query: 294 ---HWKAP-C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLA 343
H + C FS G+W+I+GS + KIYIW+ + +V+ LEG + ++
Sbjct: 294 YTGHENSKYCIFANFSVTGGKWIISGSE---DCKIYIWNLQTREIVQCLEGHTQPVLASD 350
Query: 344 WHPVHPIIVSVSLT--GWVYIWAKD 366
HPV II S +L ++IW D
Sbjct: 351 CHPVQNIIASGALEPDNKIHIWRSD 375
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 26 MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+ ++FNR G+L+A+G DG IWD K L D E + V +S G IL S
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN-PPVAFVKFSPNGKYILAS 274
Query: 86 AADKSLTLWDVLKGEKI 102
D +L LWD KG+ +
Sbjct: 275 NLDSTLKLWDFSKGKTL 291
Score = 55 (24.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 16/68 (23%), Positives = 33/68 (48%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD-K 89
F+ G L +D + IW+ + + L + + + WS R +VSA+D K
Sbjct: 95 FSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL--GVNDIAWSS-DSRCVVSASDDK 151
Query: 90 SLTLWDVL 97
+L +++++
Sbjct: 152 TLKIFEIV 159
Score = 46 (21.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDV 96
+I+S +S G + S+ADK++ +W++
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNM 116
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 101 (40.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 21 LEHG-VMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRD---KECVAAITSVCWS 76
L+H V+ C+ F+ G LA GC+ S I+D +T D K+ I SVC+S
Sbjct: 278 LQHNSVVCCVNFSNDGKYLATGCNR-SAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFS 336
Query: 77 KYGHRILVSAADKSLTLWDV 96
G+ + A DK++ +WD+
Sbjct: 337 PDGNYLATGAEDKTVKVWDI 356
Score = 96 (38.9 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 26 MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
++ + F+ G LA G D + +WD T+ I E I S+ +S G I+
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHEL--DIYSLDYSSDGRFIVSG 387
Query: 86 AADKSLTLWDVLKGE 100
+ DK +WD+ KG+
Sbjct: 388 SGDKKAKIWDIEKGK 402
Score = 92 (37.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 22 EHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHR 81
++GV +A + G L+AAG D +WD +T G E R + + ++ SV +S G
Sbjct: 415 KNGVTS-VAMSPDGRLVAAGSLDNIVRLWDAQT-GYFLE-RYEGHLDSVYSVAFSPDGKS 471
Query: 82 ILVSAADKSLTLWDVLKGEK 101
+ + DKSL LWD L G +
Sbjct: 472 LASGSLDKSLKLWD-LSGSR 490
Score = 88 (36.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 277 SKCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGP 335
S+C A F +D + + FS DG W+I+GS + + WD R G +L+G
Sbjct: 493 SRCRATFNGHKDFVLSV-----AFSPDGSWLISGSKDRS---VQFWDPRNGTTHMMLQGH 544
Query: 336 KEALIDLAWHP 346
K ++I +A P
Sbjct: 545 KNSVISVALSP 555
Score = 81 (33.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 181 FNKYGDLVYVG-NSKGEILVIDHKSNQIRALVPVS---GAAVIKNIVFSRNGQYLLTNSN 236
F+ G + G N +I +D ++ A V S G I+++ FS +G YL T +
Sbjct: 289 FSNDGKYLATGCNRSAQIYDVD-TGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAE 347
Query: 237 DRTIRIYD 244
D+T++++D
Sbjct: 348 DKTVKVWD 355
Score = 79 (32.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 21/76 (27%), Positives = 32/76 (42%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA--AITSVCWSKYGHRILVSAAD 88
++ G + +G D IWD E A L ++E +TSV S G + + D
Sbjct: 377 YSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLD 436
Query: 89 KSLTLWDVLKGEKITR 104
+ LWD G + R
Sbjct: 437 NIVRLWDAQTGYFLER 452
Score = 69 (29.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/206 (19%), Positives = 88/206 (42%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSND 237
+ CF+ G+ + G + V D + +I+ I ++ +S +G+++++ S D
Sbjct: 332 SVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTF-YGHELDIYSLDYSSDGRFIVSGSGD 390
Query: 238 RTIRIYD-------------NLLPLKNGLEALVDIEKG-IAEPNGIEKMKMVGSKCLALF 283
+ +I+D + P KNG+ ++ G + ++ + + F
Sbjct: 391 KKAKIWDIEKGKCAFTLGNEEVGP-KNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 284 RE-FQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVK-----ILEGPKE 337
E ++ + ++ A FS DG+ + +GS K + +WD +G + G K+
Sbjct: 450 LERYEGHLDSVYSVA--FSPDGKSLASGSLDKS---LKLWDLSGSRSRSRCRATFNGHKD 504
Query: 338 ALIDLAWHPVHPIIVSVSLTGWVYIW 363
++ +A+ P ++S S V W
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFW 530
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 108 (43.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 22/79 (27%), Positives = 43/79 (54%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAA 87
C++FN + TL+A G D + +WD ++ L A I S+ ++ G+RI+ +
Sbjct: 182 CLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHS--AEIISLSFNTSGNRIITGSF 239
Query: 88 DKSLTLWDVLKGEKITRIV 106
D ++T+W+ G K+ ++
Sbjct: 240 DHTVTVWEADTGRKVYTLI 258
Score = 88 (36.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 7 DPLQGDFPEVIEEYLEHGVMKCIAFNRR-GTLLAAGCSDGSCVIWDFETRGIAKELRDKE 65
D G+ +E + V+ IAFN G +A G D +C +W ET R
Sbjct: 120 DTASGEELHTLEGH--RNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGH- 176
Query: 66 CVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKI 102
A I + ++ + + D + LWD+ GE++
Sbjct: 177 -TAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEV 212
Score = 88 (36.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 41/197 (20%), Positives = 86/197 (43%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FN G+ + G+ + V + + + + + A I + VF+ + +LT S D+T
Sbjct: 227 FNTSGNRIITGSFDHTVTVWEADTGR-KVYTLIGHCAEISSAVFNWDCSLILTGSMDKTC 285
Query: 241 RIYDNL----LPLKNG-----LEALVDIEKGI---AEPNGIEKMKMVGSK-CLALFREFQ 287
+++D + + G L++ D + A +G ++ ++ C+ +
Sbjct: 286 KLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHE 345
Query: 288 DSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHP 346
I+K+ F+ G ++ GS+ K IWD + G +++LEG + + A++
Sbjct: 346 GEISKIS-----FNPQGNRLLTGSSDKTAR---IWDAQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 347 VHPIIVSVSLTGWVYIW 363
II++ S IW
Sbjct: 398 KGDIIITGSKDNTCRIW 414
Score = 75 (31.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 179 ACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSG-AAVIKNIVFSRNGQYLLTNSND 237
+CF+ G L+ ++ G + + + + + G I I F+ G LLT S+D
Sbjct: 309 SCFDYTGKLIATASADGTARIFSAATRE--CVTKLEGHEGEISKISFNPQGNRLLTGSSD 366
Query: 238 RTIRIYD 244
+T RI+D
Sbjct: 367 KTARIWD 373
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 84 (34.6 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 17 IEEYLEH-GVMKCIAFNRRGTLLAAGCSDGSCVIWDF----ETRGIAKELRDKECVAAIT 71
I E H G + + F+ +A+G D S ++W+ E GI + AI
Sbjct: 59 IMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHK-----GAIL 113
Query: 72 SVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIV 106
+ WS+ I ++AD +L WD+ G++I R +
Sbjct: 114 DLQWSRDSKTIFSASADMTLASWDIESGQRIRRYI 148
Score = 69 (29.3 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 304 GEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVH-PIIVSVS 355
G+ + AGS G+ + +WD + G ++ L G K + D+ + P + PIIVS S
Sbjct: 297 GDKIAAGS---GDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSAS 347
Score = 68 (29.0 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 30/109 (27%), Positives = 49/109 (44%)
Query: 138 VDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTP-TAACFNKYGDLVYVGNSKGE 196
V++S +L A D GI + + D P TA ++ G+ V+ G
Sbjct: 157 VEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNA 216
Query: 197 ILVIDHKSNQIRALVPVSGAA-VIKNIVFSRNGQYLLTNSNDRTIRIYD 244
I V D + I + ++G I ++ S + Q LL+NS D T+R +D
Sbjct: 217 IHVWDIRKKAI--VYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWD 263
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 100 (40.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSN--------QIRALVPVS-GAAVIKNIVFSRN 227
T+ +N G G +G+ D N +++ L +S G V+ + R
Sbjct: 303 TSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRI 362
Query: 228 GQYLLTNSNDRTIRIYDN-LLPL---KNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
Y + DR I D+ ++ KNG AL+++ G+ + L
Sbjct: 363 RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVAT-----QGVHLWDLQDR---VLV 414
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKEALIDL 342
R++Q + CF G E IA S S+ +HK+YIW + L + L G + +
Sbjct: 415 RKYQGVTQGFYTIHSCFGGHNEDFIA-SGSE-DHKVYIWHKRSELPIAELTGHTRTVNCV 472
Query: 343 AWHPVHP-IIVSVSLTGWVYIW 363
+W+P P ++ S S G V IW
Sbjct: 473 SWNPQIPSMMASASDDGTVRIW 494
Score = 85 (35.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 13 FPEVIEEYL-EH--GVMKCIAFNRRGTLLAAGCSDGSCVIW--DFETRGIAKELRDKECV 67
FP ++ L EH V C F+ GT LA G D + +IW D +T + K L+ E
Sbjct: 196 FPCYTQQILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGH 253
Query: 68 A-AITSVCWSKYGHRILVSAAD--KSLTLWDVLKGEKITRI 105
A ++ + WS + ++ D L LW+V GE T++
Sbjct: 254 AYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKM 294
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 100 (40.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSN--------QIRALVPVS-GAAVIKNIVFSRN 227
T+ +N G G +G+ D N +++ L +S G V+ + R
Sbjct: 303 TSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRI 362
Query: 228 GQYLLTNSNDRTIRIYDN-LLPL---KNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
Y + DR I D+ ++ KNG AL+++ G+ + L
Sbjct: 363 RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVAT-----QGVHLWDLQDR---VLV 414
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKEALIDL 342
R++Q + CF G E IA S S+ +HK+YIW + L + L G + +
Sbjct: 415 RKYQGVTQGFYTIHSCFGGHNEDFIA-SGSE-DHKVYIWHKRSELPIAELTGHTRTVNCV 472
Query: 343 AWHPVHP-IIVSVSLTGWVYIW 363
+W+P P ++ S S G V IW
Sbjct: 473 SWNPQIPSMMASASDDGTVRIW 494
Score = 85 (35.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 13 FPEVIEEYL-EH--GVMKCIAFNRRGTLLAAGCSDGSCVIW--DFETRGIAKELRDKECV 67
FP ++ L EH V C F+ GT LA G D + +IW D +T + K L+ E
Sbjct: 196 FPCYTQQILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGH 253
Query: 68 A-AITSVCWSKYGHRILVSAAD--KSLTLWDVLKGEKITRI 105
A ++ + WS + ++ D L LW+V GE T++
Sbjct: 254 AYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKM 294
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 120 (47.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 54/205 (26%), Positives = 91/205 (44%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
FN LV G+ + + D ++ +P V + F+R+G + + S D +
Sbjct: 171 FNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPV-SAVSFNRDGSLITSGSYDGLV 229
Query: 241 RIYDNLLPLKNG--LEALVDIEKG-IA----EPNGIEKMKMVGSKCLALF--------RE 285
RI+D NG ++ LVD E +A PNG + L L+ ++
Sbjct: 230 RIWDTA----NGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQ 285
Query: 286 FQDSITKMHWKAPCFS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLA 343
+Q + FS G+W+I+GS + KIY+W+ + +V+ LEG +A+I
Sbjct: 286 YQGHENNKYCIFANFSVTGGKWIISGSE---DCKIYVWNLQTKEVVQSLEGHTQAVIASD 342
Query: 344 WHPVHPIIVSVSLT--GWVYIWAKD 366
HP+ +I S +L + IW D
Sbjct: 343 CHPMQNMIASGALEPDNTIRIWRSD 367
Score = 59 (25.8 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 14/71 (19%), Positives = 30/71 (42%)
Query: 26 MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+ + F+ G L +D + IW+ + L + + WS I+ +
Sbjct: 82 ISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKL--GVNDFAWSADSKSIVTA 139
Query: 86 AADKSLTLWDV 96
+ DK+L +++V
Sbjct: 140 SDDKTLKIYEV 150
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDV 96
+I++V +S G + S+ADK++ +W++
Sbjct: 81 SISAVKFSPCGKFLGTSSADKTVKIWNM 108
>UNIPROTKB|F1SGL8 [details] [associations]
symbol:DCAF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:CT961055 RefSeq:XP_001928394.1 UniGene:Ssc.26086
ProteinModelPortal:F1SGL8 Ensembl:ENSSSCT00000002247
GeneID:100157270 KEGG:ssc:100157270 Uniprot:F1SGL8
Length = 546
Score = 125 (49.1 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 42/162 (25%), Positives = 76/162 (46%)
Query: 227 NGQYLLTNSNDRTIRIYD-NLLPLKNGLEALV--------DIEKGIAEPNGIEKMKMVGS 277
+ +YL++NS D+TI+++D + G+EA D K+K+ G
Sbjct: 366 DARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQDWDYRWQQVPKKAWRKLKLPGD 425
Query: 278 KCLALFREFQDSITKMHWK-APCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGP 335
L +R T + + +P +S +++ +G S G K+ ++D +G++VK L
Sbjct: 426 SSLMTYRGHGVLHTLIRCRFSPTYSTGQQYIYSG-CSTG--KVVVYDLLSGHIVKKLTSH 482
Query: 336 KEALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPD 377
K + D++WHP IVS S G + +W E + P+
Sbjct: 483 KACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQAEYFQDDMPE 524
Score = 58 (25.5 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
FTP F + + D +++ N GE H + +R PV + +I S +G+ +
Sbjct: 226 FTPDGNHFLYSSWSDYIHICNIYGE--GDTHTALDLR---PVERRFAVFSIAVSSDGREV 280
Query: 232 LTNSNDRTIRIYD 244
L +ND + ++D
Sbjct: 281 LGGANDGCLYVFD 293
Score = 58 (25.5 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 26 MKCIAF-NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS----VCW--SKY 78
+ +AF + +L +G D C +WD T +E D + V A+ + + SK
Sbjct: 310 VNAVAFADMSSQILFSGGDDAICKVWDRRTM---RE-DDPKPVGALAGHQDGITFIDSKG 365
Query: 79 GHRILVS-AADKSLTLWDV 96
R L+S + D+++ LWD+
Sbjct: 366 DARYLISNSKDQTIKLWDI 384
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 29 IAFNRRGT-LLAAGCSD--GSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+AF G L + SD C I+ A +LR E A+ S+ S G +L
Sbjct: 224 VAFTPDGNHFLYSSWSDYIHICNIYGEGDTHTALDLRPVERRFAVFSIAVSSDGREVLGG 283
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQA 114
A D L ++D + + +I + + A
Sbjct: 284 ANDGCLYVFDREQNRRTLQIESHEDDVNA 312
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 105 (42.0 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 34/132 (25%), Positives = 58/132 (43%)
Query: 2 NAPIIDPLQGDFPEV-IEEYLEH--GVMKCIAFNRRGTLLAAGCSDGSCVIWDF--ETRG 56
NAP P + P+ I + H G+ F + LL +G D +W+ E R
Sbjct: 265 NAP---PTKCFLPKAHIHTWSGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRC 321
Query: 57 IAKELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARL 116
I ++ AI + W+ G L ++ D+ + LWD G+ ++R ++ P +
Sbjct: 322 IRTFSGHRQ---AIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKF 378
Query: 117 HPGSSTPSLCLA 128
HP +S L +A
Sbjct: 379 HPDNSKQHLFVA 390
Score = 79 (32.9 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 46/199 (23%), Positives = 81/199 (40%)
Query: 182 NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIR 241
N L G S +I+ D +S I +V I F + + +T S+D+++R
Sbjct: 382 NSKQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGSV-STITFVDDNRRFVTTSDDKSMR 440
Query: 242 IYDNLLP--LKNGLEALVDIEKGIA-EPNG----IEKM--KMVGSKCLALFREFQDSITK 292
I++ +P +K + + + PNG + + K+V L F+ +
Sbjct: 441 IWEWDIPVDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFT 500
Query: 293 MHWKA--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHP 346
H + C FS D ++++G G+ K YIWD + + K + I WHP
Sbjct: 501 GHMVSGYACQLDFSPDMSYLVSGD---GDGKCYIWDWKTTKMYKKWQAHDGVCISALWHP 557
Query: 347 VHPI--IVSVSLTGWVYIW 363
H +V+ G + W
Sbjct: 558 -HEASKVVTAGWDGQIKYW 575
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 116 (45.9 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 52/207 (25%), Positives = 87/207 (42%)
Query: 175 TPTAACFNKYGDLVY-VGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLT 233
TP C N + VG + +I ID ++ I L I I N + L++
Sbjct: 416 TPYCLCLNPDDTNTFLVGGANNKICHIDFRTGNIE-LEYNEHLQAINTITLCENNKKLIS 474
Query: 234 NSNDRTIRIYDNLLPL--KNGLEA-LVDIEKGIAEPNG----IEKMKMVGS--KCLALFR 284
S+D+ I I++ LP+ K +A + I P+ + M V + + FR
Sbjct: 475 TSDDKKIFIWEYGLPVVVKYISDASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFR 534
Query: 285 EFQDSITKMHWK------APCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKE 337
F K H C S DG++VI+G ++ G ++IW+ + K ++ K
Sbjct: 535 LFSKKTFKGHHNIGYSINVSC-SNDGKYVISGDSNGG---LFIWNWKKMVNFKNIKAHKN 590
Query: 338 ALIDLAWHPVHP-IIVSVSLTGWVYIW 363
ID WHP ++ + S G + +W
Sbjct: 591 VCIDCVWHPFKTSMLATASWDGTIKLW 617
Score = 68 (29.0 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 9 LQGDFP--EVIEEYLEH--GVMKCIAFNRRGTLLAAGCSDGSCVIWD-FETRGIAKELRD 63
++ +FP + I Y H GV K F + G L + D + +W ++++ + +
Sbjct: 312 IEENFPPKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYKG 371
Query: 64 KECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQ-TPLQARLHPGSST 122
+ V + G L + D ++ WD G KI I Q+ TP L+P +
Sbjct: 372 H--FKGVKDVLFDNDGSSFLSCSYDNNVIYWDTEYG-KIKGIYNQKKTPYCLCLNPDDTN 428
Query: 123 PSL 125
L
Sbjct: 429 TFL 431
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 116 (45.9 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 52/207 (25%), Positives = 87/207 (42%)
Query: 175 TPTAACFNKYGDLVY-VGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLT 233
TP C N + VG + +I ID ++ I L I I N + L++
Sbjct: 416 TPYCLCLNPDDTNTFLVGGANNKICHIDFRTGNIE-LEYNEHLQAINTITLCENNKKLIS 474
Query: 234 NSNDRTIRIYDNLLPL--KNGLEA-LVDIEKGIAEPNG----IEKMKMVGS--KCLALFR 284
S+D+ I I++ LP+ K +A + I P+ + M V + + FR
Sbjct: 475 TSDDKKIFIWEYGLPVVVKYISDASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFR 534
Query: 285 EFQDSITKMHWK------APCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKE 337
F K H C S DG++VI+G ++ G ++IW+ + K ++ K
Sbjct: 535 LFSKKTFKGHHNIGYSINVSC-SNDGKYVISGDSNGG---LFIWNWKKMVNFKNIKAHKN 590
Query: 338 ALIDLAWHPVHP-IIVSVSLTGWVYIW 363
ID WHP ++ + S G + +W
Sbjct: 591 VCIDCVWHPFKTSMLATASWDGTIKLW 617
Score = 68 (29.0 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 9 LQGDFP--EVIEEYLEH--GVMKCIAFNRRGTLLAAGCSDGSCVIWD-FETRGIAKELRD 63
++ +FP + I Y H GV K F + G L + D + +W ++++ + +
Sbjct: 312 IEENFPPKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYKG 371
Query: 64 KECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQ-TPLQARLHPGSST 122
+ V + G L + D ++ WD G KI I Q+ TP L+P +
Sbjct: 372 H--FKGVKDVLFDNDGSSFLSCSYDNNVIYWDTEYG-KIKGIYNQKKTPYCLCLNPDDTN 428
Query: 123 PSL 125
L
Sbjct: 429 TFL 431
>TAIR|locus:2139335 [details] [associations]
symbol:AT4G03020 "AT4G03020" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GO:GO:0080008 KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135
OMA:RMLHQRE EMBL:AY099735 EMBL:BT000357 IPI:IPI00532225
RefSeq:NP_001190666.1 RefSeq:NP_192211.2 UniGene:At.34236
ProteinModelPortal:Q8LPI5 SMR:Q8LPI5 IntAct:Q8LPI5 STRING:Q8LPI5
PaxDb:Q8LPI5 PRIDE:Q8LPI5 EnsemblPlants:AT4G03020.1
EnsemblPlants:AT4G03020.2 GeneID:828111 KEGG:ath:AT4G03020
TAIR:At4g03020 InParanoid:Q8LPI5 PhylomeDB:Q8LPI5
ProtClustDB:CLSN2690277 Genevestigator:Q8LPI5 Uniprot:Q8LPI5
Length = 493
Score = 103 (41.3 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 47/200 (23%), Positives = 94/200 (47%)
Query: 180 CF-NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAV--IKNIVF--SR-NGQYLLT 233
CF ++ G+L+ G+ V D + I P +G V ++ + F SR +G+Y ++
Sbjct: 278 CFADESGNLILSGSDDNLCKVWDRRCF-IGRDKP-AGVLVGHLEGVTFIDSRGDGRYFIS 335
Query: 234 NSNDRTIRIYD-----NLLPLKNGLEALVDIE---KGIAEPNGIEKMKMVGSKCLALFRE 285
N D+TI+++D + P ++ E L + E + + P +K + ++ ++
Sbjct: 336 NGKDQTIKLWDIRKMSSSAPARH--EVLRNYEWDYRWMDYPTEARDLKHPLDQSVSTYKG 393
Query: 286 FQDSITKMH-WKAPCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGPKEALIDLA 343
T + + +P S +++ GS + +YI+D +G V +L+ + D
Sbjct: 394 HSVLRTLIRCYFSPAHSTGQKYIYTGS---NDSSVYIYDLVSGDKVAVLKHHSSPVRDCN 450
Query: 344 WHPVHPIIVSVSLTGWVYIW 363
WHP +P ++S S G + W
Sbjct: 451 WHPYYPTLISSSWDGDLVKW 470
Score = 79 (32.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+ F+ G + AG SD S ++D E ++ LR + + +VC++ +++S +D
Sbjct: 235 VKFSTDGREVVAGSSDDSIYVYDLEANRVS--LRTVAHTSDVNTVCFADESGNLILSGSD 292
Query: 89 KSLT-LWD 95
+L +WD
Sbjct: 293 DNLCKVWD 300
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 91 (37.1 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 294 HWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDLAWHPVHPIIV 352
+W C S D ++V AGSA + +++W + G +V IL+ ++ +W + +
Sbjct: 441 NWSRSCISPDDDYVAAGSA---DGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLA 497
Query: 353 SVSLTGWVYIW 363
S G+V W
Sbjct: 498 SADKNGYVCTW 508
Score = 86 (35.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAA 87
C++ + G + +G DG+ +WD +T + E+ +A+TSV S+ G+RIL S
Sbjct: 358 CLSID--GLTVFSGHMDGNLRLWDIQTGKLLSEVAGHS--SAVTSVSLSRNGNRILTSGR 413
Query: 88 DKSLTLWD 95
D ++D
Sbjct: 414 DNVHNVFD 421
Score = 78 (32.5 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 167 YSDGTPPFTPT--AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSG-AAVIKNIV 223
Y T FT A C + G V+ G+ G + + D ++ ++ L V+G ++ + ++
Sbjct: 343 YCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKL--LSEVAGHSSAVTSVS 400
Query: 224 FSRNGQYLLTNSNDRTIRIYD 244
SRNG +LT+ D ++D
Sbjct: 401 LSRNGNRILTSGRDNVHNVFD 421
Score = 54 (24.1 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 35 GTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADKSLTLW 94
GTL G D + +WD + + K L + I + + ++ + + +L +W
Sbjct: 238 GTLFTGG-QDRAVKMWDTNSGTLIKSLYGS--LGNILDMAVTHDNKSVIAATSSNNLFVW 294
Query: 95 DVLKG 99
DV G
Sbjct: 295 DVSSG 299
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 87 (35.7 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 15 EVIE-EYLEHGVMKCIAFNRRGT-LLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS 72
E++ E+ G + ++F+ G LLA+G S G IW+ + + +RD ++I S
Sbjct: 215 EIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHD-SSIIS 273
Query: 73 VCWSKYGHRILVSA-ADKSLTLW--DVLKGEKITRIVLQQTPLQARLHPGSSTPSLCL 127
+ + +L+SA AD SL +W D G+ P R G S P LC+
Sbjct: 274 LNFLA-NEPVLMSASADNSLKMWIFDTNDGD----------PRLLRFRSGHSAPPLCI 320
Score = 74 (31.1 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 263 IAEPNGIEKMKMVGSKCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIW 322
+A+ I +V K + FR D IT + CFS DG+WVI+ S + + IW
Sbjct: 533 VADDFVIRLYDVVTLKMVREFRGHTDRITDL-----CFSEDGKWVISSSM---DGSLRIW 584
Query: 323 DRAGYLVKILEGPKE--ALIDLAWHPVHPIIVSV-SLTGWVYIW 363
D L K ++G + L+ P ++ + S VY+W
Sbjct: 585 DVI--LAKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 71 (30.1 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 35/139 (25%), Positives = 62/139 (44%)
Query: 116 LHPGSSTPSLCLACPLSSAPMIVDLSTGSTSILPIAVPD-VANG--IAPSSRNKYS-DGT 171
L P P+ AC +S+ + T I + ++ G S + +Y+ DG
Sbjct: 417 LKPCPENPTPIKACAISACGNFAVVGTAGGWIERFNLQSGISRGSYFDMSEKRRYAHDGE 476
Query: 172 PPFTPTAACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
AC + L+ G++ V D K ++++ V G +++K IV+ R L
Sbjct: 477 ---VIGVAC-DSTNTLMISAGYHGDLKVWDFKKRELKSQWDV-GCSLVK-IVYHRVNGLL 530
Query: 232 LTNSNDRTIRIYDNLLPLK 250
T ++D IR+YD ++ LK
Sbjct: 531 ATVADDFVIRLYD-VVTLK 548
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 100 (40.3 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSN--------QIRALVPVS-GAAVIKNIVFSRN 227
T+ +N G G +G+ D N +++ L +S G V+ + R
Sbjct: 449 TSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRI 508
Query: 228 GQYLLTNSNDRTIRIYDN-LLPL---KNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
Y + DR I D+ ++ KNG AL+++ G+ + L
Sbjct: 509 RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVAT-----QGVHLWDLQDR---VLV 560
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKEALIDL 342
R++Q + CF G E IA S S+ +HK+YIW + L + L G + +
Sbjct: 561 RKYQGVTQGFYTIHSCFGGHNEDFIA-SGSE-DHKVYIWHKRSELPIAELTGHTRTVNCV 618
Query: 343 AWHPVHP-IIVSVSLTGWVYIW 363
+W+P P ++ S S G V IW
Sbjct: 619 SWNPQIPSMMASASDDGTVRIW 640
Score = 85 (35.0 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 13 FPEVIEEYL-EH--GVMKCIAFNRRGTLLAAGCSDGSCVIW--DFETRGIAKELRDKECV 67
FP ++ L EH V C F+ GT LA G D + +IW D +T + K L+ E
Sbjct: 342 FPCYTQQILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGH 399
Query: 68 A-AITSVCWSKYGHRILVSAAD--KSLTLWDVLKGEKITRI 105
A ++ + WS + ++ D L LW+V GE T++
Sbjct: 400 AYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKM 440
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 100 (40.3 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSN--------QIRALVPVS-GAAVIKNIVFSRN 227
T+ +N G G +G+ D N +++ L +S G V+ + R
Sbjct: 450 TSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRI 509
Query: 228 GQYLLTNSNDRTIRIYDN-LLPL---KNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
Y + DR I D+ ++ KNG AL+++ G+ + L
Sbjct: 510 RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVAT-----QGVHLWDLQDR---VLV 561
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKEALIDL 342
R++Q + CF G E IA S S+ +HK+YIW + L + L G + +
Sbjct: 562 RKYQGVTQGFYTIHSCFGGHNEDFIA-SGSE-DHKVYIWHKRSELPIAELTGHTRTVNCV 619
Query: 343 AWHPVHP-IIVSVSLTGWVYIW 363
+W+P P ++ S S G V IW
Sbjct: 620 SWNPQIPSMMASASDDGTVRIW 641
Score = 85 (35.0 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 13 FPEVIEEYL-EH--GVMKCIAFNRRGTLLAAGCSDGSCVIW--DFETRGIAKELRDKECV 67
FP ++ L EH V C F+ GT LA G D + +IW D +T + K L+ E
Sbjct: 343 FPCYTQQILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGH 400
Query: 68 A-AITSVCWSKYGHRILVSAAD--KSLTLWDVLKGEKITRI 105
A ++ + WS + ++ D L LW+V GE T++
Sbjct: 401 AYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKM 441
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 101 (40.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSN--------QIRALVPVS-GAAVIKNIVFSRN 227
T+ +N G G +G+ D N +++ L +S G V+ + R
Sbjct: 473 TSVAWNPDGKRFVTGGQRGQFYQCDLNGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRI 532
Query: 228 GQYLLTNSNDRTIRIYDN-LLPL---KNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
Y + DR I D+ ++ KNG AL+++ G+ + L
Sbjct: 533 RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVAT-----QGVHLWDLQDR---VLV 584
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKEALIDL 342
R++Q + CF G E IA S S+ +HK+YIW + L + L G + +
Sbjct: 585 RKYQGVTQGFYTIHSCFGGHNEDFIA-SGSE-DHKVYIWHKRSELPIAELTGHTRTVNCV 642
Query: 343 AWHPVHP-IIVSVSLTGWVYIW 363
+W+P P ++ S S G V IW
Sbjct: 643 SWNPQIPSMMASASDDGTVRIW 664
Score = 84 (34.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 13 FPEVIEEYL-EH--GVMKCIAFNRRGTLLAAGCSDGSCVIW--DFETRGIAKELRDKECV 67
FP ++ L EH V C F+ GT LA G D + +IW D +T + K L+ E
Sbjct: 366 FPCYTQQILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQVDPDTHQL-KLLKTLEGH 423
Query: 68 A-AITSVCWSKYGHRILVSAAD--KSLTLWDVLKGEKITRI 105
A ++ + WS + ++ D L LW+V GE T++
Sbjct: 424 AYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKM 464
>RGD|1565589 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1565589 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 IPI:IPI00767527 PRIDE:F1LTR1
Ensembl:ENSRNOT00000005059 Uniprot:F1LTR1
Length = 622
Score = 100 (40.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSN--------QIRALVPVS-GAAVIKNIVFSRN 227
T+ +N G G +G+ D N +++ L +S G V+ + R
Sbjct: 411 TSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRI 470
Query: 228 GQYLLTNSNDRTIRIYDN-LLPL---KNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
Y + DR I D+ ++ KNG AL+++ G+ + L
Sbjct: 471 RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVAT-----QGVHLWDLQDR---VLV 522
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKEALIDL 342
R++Q + CF G E IA S S+ +HK+YIW + L + L G + +
Sbjct: 523 RKYQGVTQGFYTIHSCFGGHNEDFIA-SGSE-DHKVYIWHKRSELPIAELTGHTRTVNCV 580
Query: 343 AWHPVHP-IIVSVSLTGWVYIW 363
+W+P P ++ S S G V IW
Sbjct: 581 SWNPQIPSMMASASDDGTVRIW 602
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 13 FPEVIEEYL-EH--GVMKCIAFNRRGTLLAAGCSDGSCVIW--DFETRGIAKELRDKECV 67
FP ++ L EH V C F+ GT LA G D + ++W D +T + K L+ E
Sbjct: 304 FPCYTQQILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIVWQVDADTH-LLKLLKTLEGH 361
Query: 68 A-AITSVCWSKYGHRILVSAAD--KSLTLWDVLKGEKITRI 105
A ++ + WS ++ D L LW+V GE T++
Sbjct: 362 AYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKM 402
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 100 (40.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 50/202 (24%), Positives = 81/202 (40%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPV---------SGAAVIKNIVFSRN 227
T+ +N G G +G+ D N + + V G V+ + R
Sbjct: 362 TSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLESWEGVRVQCLWCMGDGRTVLASDTHQRI 421
Query: 228 GQYLLTNSNDRTIRIYDN-LLPL---KNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
Y + DR I D+ ++ KNG AL+++ G+ + L
Sbjct: 422 RGYSFEDLTDRNIVQEDHPIMSFTVSKNGRLALLNVAT-----QGVHLWDLQDR---VLV 473
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-LEGPKEALIDL 342
R++Q + CF G E IA S S+ +HK+YIW + L + L G + +
Sbjct: 474 RKYQGVTQGFYTIHSCFGGHNEDFIA-SGSE-DHKVYIWHKRSELPIVELTGHTRTVNCV 531
Query: 343 AWHPVHP-IIVSVSLTGWVYIW 363
+W+P P ++ S S G V IW
Sbjct: 532 SWNPCIPSLMASASDDGTVRIW 553
Score = 82 (33.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/101 (32%), Positives = 47/101 (46%)
Query: 13 FPEVIEEYL-EH--GVMKCIAFNRRGTLLAAGCSDGSCVIWDFE--TRGIAKELRDKECV 67
FP ++ L EH V C F+ GT LA G D + +IW E T + K LR E
Sbjct: 255 FPCYTQQILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQVEPDTHQL-KLLRTLEGH 312
Query: 68 A-AITSVCWSKYGHRILVSAAD--KSLTLWDVLKGEKITRI 105
A ++ + WS ++ D L LW+V GE T++
Sbjct: 313 AYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKM 353
>RGD|1311288 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1311288 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:BC087110 EMBL:BC091364 IPI:IPI00196528 RefSeq:NP_001009686.1
UniGene:Rn.16542 ProteinModelPortal:Q5M9G8 STRING:Q5M9G8
Ensembl:ENSRNOT00000059987 GeneID:305895 KEGG:rno:305895
UCSC:RGD:1311288 InParanoid:Q5M9G8 NextBio:655204
Genevestigator:Q5M9G8 Uniprot:Q5M9G8
Length = 549
Score = 124 (48.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 40/148 (27%), Positives = 74/148 (50%)
Query: 227 NGQYLLTNSNDRTIRIYD-NLLPLKNGLEA--LVDIEKGI------AEPNGIEKMKMVGS 277
+ +YL++NS D+TI+++D + G+EA L ++ +K+K+ G
Sbjct: 366 DARYLISNSKDQTIKLWDIRRFSSREGMEASRLAATQQNWDYRWQQVPKKAWKKLKLPGD 425
Query: 278 KCLALFREFQDSITKMHWK-APCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGP 335
L +R T + + +P S +++ +G S G K+ ++D +G++VK L
Sbjct: 426 SSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSG-CSTG--KVVVYDLLSGHIVKKLTNH 482
Query: 336 KEALIDLAWHPVHPIIVSVSLTGWVYIW 363
K + D++WHP IVS S G + +W
Sbjct: 483 KACVRDVSWHPFEEKIVSSSWDGSLRLW 510
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 26 MKCIAF-NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS----VCW--SKY 78
+ +AF + +L +G D C +WD T +E D + V A+ + + SK
Sbjct: 310 VNAVAFADISSQILFSGGDDAICKVWDRRTM---RE-DDPKPVGALAGHQDGITFIDSKG 365
Query: 79 GHRILVS-AADKSLTLWDV 96
R L+S + D+++ LWD+
Sbjct: 366 DARYLISNSKDQTIKLWDI 384
Score = 48 (22.0 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 29 IAFNRRGT-LLAAGCSD--GSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+AF G L + SD C I+ A +LR E A+ S+ S G +L
Sbjct: 224 VAFTPDGNHFLYSSWSDYIHICSIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREVLGG 283
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQA 114
A D L ++D + + +I + + A
Sbjct: 284 ANDGCLYVFDREQNRRTLQIESHEDDVNA 312
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
FTP F + + D +++ + GE H + +R P + +I S +G+ +
Sbjct: 226 FTPDGNHFLYSSWSDYIHICSIYGE--GDTHTALDLR---PDERRFAVFSIAVSSDGREV 280
Query: 232 LTNSNDRTIRIYD 244
L +ND + ++D
Sbjct: 281 LGGANDGCLYVFD 293
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 16/90 (17%), Positives = 38/90 (42%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK--ELRDKECVAAITSVCWSKYGHRILVS 85
C +++ G + + C D + ++D K ++ ++ ++ V ++ G+ L S
Sbjct: 177 CGIYSKDGQIFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYS 236
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQAR 115
+ + + + GE T L P + R
Sbjct: 237 SWSDYIHICSIY-GEGDTHTALDLRPDERR 265
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 100 (40.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 TAACFNKYGDLVYVGNSKGEILVIDHKSN--------QIRALVPVS-GAAVIKNIVFSRN 227
T+ +N G G +G+ D N +++ L +S G V+ + R
Sbjct: 430 TSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRV 489
Query: 228 GQYLLTNSNDRTIRIYDN-LLPL---KNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALF 283
Y + DR I D+ ++ KNG AL+++ G+ + L
Sbjct: 490 RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVAT-----QGVHLWDLQDR---VLV 541
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRAGYL-VKILEGPKEALIDL 342
R++Q + CF G E IA S S+ +HK+YIW + L + L G + +
Sbjct: 542 RKYQGVTQGFYTIHSCFGGHNEDFIA-SGSE-DHKVYIWHKRSELPIAELTGHTRTVNCV 599
Query: 343 AWHPVHP-IIVSVSLTGWVYIW 363
+W+P P ++ S S G V IW
Sbjct: 600 SWNPQIPSMMASASDDGTVRIW 621
Score = 83 (34.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 13 FPEVIEEYL-EH--GVMKCIAFNRRGTLLAAGCSDGSCVIW--DFETRGIAKELRDKECV 67
FP ++ L EH V C F+ GT LA G D + +IW D +T + K L+ E
Sbjct: 323 FPCYTQQILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGH 380
Query: 68 A-AITSVCWSKYGHRILVSAAD--KSLTLWDVLKGEKITRI 105
A ++ + WS ++ D L LW+V GE T++
Sbjct: 381 AYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKM 421
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 30/121 (24%), Positives = 53/121 (43%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK-ELRDKECVAAITSVCWSKYGHRI 82
G + C+ FN T++ +G DG+ WD +R + ++ D E I+S+ S+ H +
Sbjct: 110 GKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILD-ESQDGISSLKVSE--HEL 166
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLACPLSSAPMIVDLST 142
L + D + +D+ G+ + G T L+ L S ++D ST
Sbjct: 167 LTGSVDGRVRRYDLRMGQLQVDYIGSPITCVCFSRDGQCT----LSSSLDSTVRLLDKST 222
Query: 143 G 143
G
Sbjct: 223 G 223
Score = 77 (32.2 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 285 EFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDRA-GYLVKILEGPKEALIDLA 343
E+ + K +K C D + + S S+ H +Y WD G L L K + L+
Sbjct: 228 EYSGHVNK-GYKLDCCLTDKDTHVL-SCSEDGH-VYYWDLVEGSLTLKLPVGKAVVQSLS 284
Query: 344 WHPVHPIIVSVSLTGWVYIWA---KDYTENWS 372
+HP P +++ S+ G V +W +D EN S
Sbjct: 285 FHPTEPRLLT-SMEGRVQVWGAEPEDAAENES 315
Score = 74 (31.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 22 EHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHR 81
+ G ++ + FN G L SD S +W +RG + + + Y +
Sbjct: 24 QQGAVRAVRFNADGNYLLTCGSDKSLKLWSV-SRGTLLKTYSGHGYEVLDAD--GSYDNS 80
Query: 82 ILVS-AADKSLTLWDVLKGEKITR 104
L S ++DK++ LWDV G+ +TR
Sbjct: 81 QLCSCSSDKTVILWDVASGQ-VTR 103
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 191 GNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYD 244
G+ G + D + Q++ V G+ I + FSR+GQ L++S D T+R+ D
Sbjct: 169 GSVDGRVRRYDLRMGQLQ--VDYIGSP-ITCVCFSRDGQCTLSSSLDSTVRLLD 219
Score = 62 (26.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 62 RDKECV-AAITSVCWSKYGHRILVSAADKSLTLWDVLKG 99
R +C A+ +V ++ G+ +L +DKSL LW V +G
Sbjct: 19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRG 57
>FB|FBgn0034646 [details] [associations]
symbol:Rae1 "Rae1" species:7227 "Drosophila melanogaster"
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0051297
"centrosome organization" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045886 "negative regulation of synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0010506 "regulation of
autophagy" evidence=IMP] [GO:0005643 "nuclear pore" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005635 GO:GO:0051297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:2000045 EMBL:AY118568
UniGene:Dm.11463 ProteinModelPortal:Q7JVX4 STRING:Q7JVX4
PaxDb:Q7JVX4 PRIDE:Q7JVX4 FlyBase:FBgn0034646 InParanoid:Q7JVX4
OrthoDB:EOG42NGFW ArrayExpress:Q7JVX4 Bgee:Q7JVX4 Uniprot:Q7JVX4
Length = 360
Score = 107 (42.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 38 LAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADKSLTLWDVL 97
L AG D + W+ E G K + VCWS G ++ V++ DK + LWD L
Sbjct: 53 LVAGSWDSTVRCWEVEQNGATVPKSMKTMGGPVLDVCWSDDGSKVFVASCDKQVKLWD-L 111
Query: 98 KGEKITRIVLQQTPLQARLHPGSSTPSLCL 127
+++ ++ P++ H CL
Sbjct: 112 ASDQVMQVAAHDGPVKT-CHMVKGPTYTCL 140
Score = 68 (29.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 338 ALIDLAWHPVHPIIVSVSLTGWVYIWAKD 366
A+ D+A+HPVH +V+V G W KD
Sbjct: 268 AVNDIAFHPVHGTLVTVGSDGTFSFWDKD 296
>MGI|MGI:90168 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:90168 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:AK033540 EMBL:AK152395 EMBL:BC008545 EMBL:BC037001
IPI:IPI00127271 IPI:IPI00378419 RefSeq:NP_001185938.1
RefSeq:NP_598495.1 UniGene:Mm.11535 UniGene:Mm.488383
ProteinModelPortal:Q91VU6 SMR:Q91VU6 STRING:Q91VU6
PhosphoSite:Q91VU6 PaxDb:Q91VU6 PRIDE:Q91VU6 DNASU:28199
Ensembl:ENSMUST00000072530 Ensembl:ENSMUST00000117236
Ensembl:ENSMUST00000121622 GeneID:28199 KEGG:mmu:28199
UCSC:uc007tyz.2 InParanoid:Q91VU6 ChiTaRS:DCAF11 NextBio:306796
Bgee:Q91VU6 CleanEx:MM_WDR23 Genevestigator:Q91VU6
GermOnline:ENSMUSG00000022214 Uniprot:Q91VU6
Length = 549
Score = 123 (48.4 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 43/162 (26%), Positives = 79/162 (48%)
Query: 227 NGQYLLTNSNDRTIRIYD-NLLPLKNGLEA--LVDIEKGI-----AEPN-GIEKMKMVGS 277
+ +YL++NS D+TI+++D + G+EA L ++ P +K+K+ G
Sbjct: 366 DARYLISNSKDQTIKLWDIRRFSSREGMEASRLAATQQNWDYRWQQVPKIAWKKLKLPGD 425
Query: 278 KCLALFREFQDSITKMHWK-APCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGP 335
L +R T + + +P S +++ +G S G K+ ++D +G++VK L
Sbjct: 426 SSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSG-CSTG--KVVVYDLLSGHIVKKLTNH 482
Query: 336 KEALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPD 377
K + D++WHP IVS S G + +W E + P+
Sbjct: 483 KACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQAEYFQDDMPE 524
Score = 56 (24.8 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 26 MKCIAF-NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS----VCW--SKY 78
+ +AF + +L +G D C +WD T +E D + V A+ + + SK
Sbjct: 310 VNAVAFADISSQILFSGGDDAICKVWDRRTM---RE-DDPKPVGALAGHQDGITFIDSKG 365
Query: 79 GHRILVS-AADKSLTLWDV 96
R L+S + D+++ LWD+
Sbjct: 366 DARYLISNSKDQTIKLWDI 384
Score = 51 (23.0 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
FTP F + + D +++ N GE H + +R P + +I S +G+ +
Sbjct: 226 FTPDGNHFLYSSWSDYIHICNIYGE--GDTHTALDLR---PDERRFAVFSIAVSSDGREV 280
Query: 232 LTNSNDRTIRIYD 244
L +ND + ++D
Sbjct: 281 LGGANDGCLYVFD 293
Score = 47 (21.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 29 IAFNRRGT-LLAAGCSD--GSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+AF G L + SD C I+ A +LR E A+ S+ S G +L
Sbjct: 224 VAFTPDGNHFLYSSWSDYIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREVLGG 283
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQA 114
A D L ++D + + +I + + A
Sbjct: 284 ANDGCLYVFDREQNRRTLQIESHEDDVNA 312
Score = 46 (21.3 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 16/90 (17%), Positives = 39/90 (43%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK--ELRDKECVAAITSVCWSKYGHRILVS 85
C +++ G + + C D + ++D K ++ ++ ++ V ++ G+ L S
Sbjct: 177 CGIYSKDGQIFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYS 236
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQAR 115
+ + + ++ GE T L P + R
Sbjct: 237 SWSDYIHICNIY-GEGDTHTALDLRPDERR 265
Score = 37 (18.1 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 421 KDAFSDSDMSQEELCFL-PA-IPCPDV 445
+D +SDM++ +C P +PCP V
Sbjct: 519 QDDMPESDMNR--VCSSGPTPVPCPSV 543
>UNIPROTKB|Q5R7H5 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 GO:GO:0080008 CTD:80344 HOGENOM:HOG000241217
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:CR857585
EMBL:CR860141 RefSeq:NP_001126335.1 RefSeq:NP_001128756.1
UniGene:Pab.18820 UniGene:Pab.19847 ProteinModelPortal:Q5R7H5
GeneID:100173316 GeneID:100189652 KEGG:pon:100173316
KEGG:pon:100189652 InParanoid:Q5R7H5 Uniprot:Q5R7H5
Length = 546
Score = 120 (47.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 227 NGQYLLTNSNDRTIRIYD-NLLPLKNGLEALV--------DIEKGIAEPNGIEKMKMVGS 277
+ +YL++NS D+TI+++D + G+EA D K+K+ G
Sbjct: 366 DARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGD 425
Query: 278 KCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGPK 336
L +R T + + G+ I S G K+ ++D +G++VK L K
Sbjct: 426 SSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTG--KVVVYDLLSGHIVKKLTNHK 483
Query: 337 EALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPD 377
+ D++WHP IVS S G + +W E + P+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQAEYFQDDMPE 524
Score = 56 (24.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 26 MKCIAF-NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS----VCW--SKY 78
+ +AF + +L +G D C +WD T +E D + V A+ + + SK
Sbjct: 310 VNAVAFADISSQILFSGGDDAICKVWDRRTM---RE-DDPKPVGALAGHQDGITFIDSKG 365
Query: 79 GHRILVS-AADKSLTLWDV 96
R L+S + D+++ LWD+
Sbjct: 366 DARYLISNSKDQTIKLWDI 384
Score = 54 (24.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
FTP + F + + D +++ N GE H + +R P + +I S +G+ +
Sbjct: 226 FTPDGSHFLYSSWSDYIHICNIYGE--GDTHTALDLR---PDERRFAVFSIAVSSDGREV 280
Query: 232 LTNSNDRTIRIYD 244
L +ND + ++D
Sbjct: 281 LGGANDGCLYVFD 293
Score = 48 (22.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 29 IAFNRRGT-LLAAGCSD--GSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+AF G+ L + SD C I+ A +LR E A+ S+ S G +L
Sbjct: 224 VAFTPDGSHFLYSSWSDYIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREVLGG 283
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQA 114
A D L ++D + + +I + + A
Sbjct: 284 ANDGCLYVFDREQNRRTLQIESHEDDVNA 312
Score = 45 (20.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 16/90 (17%), Positives = 38/90 (42%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK--ELRDKECVAAITSVCWSKYGHRILVS 85
C +++ G + + C D + ++D K ++ ++ ++ V ++ G L S
Sbjct: 177 CGIYSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGSHFLYS 236
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQAR 115
+ + + ++ GE T L P + R
Sbjct: 237 SWSDYIHICNIY-GEGDTHTALDLRPDERR 265
>UNIPROTKB|Q8TEB1 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 EMBL:CH471078 EMBL:AL136295 GO:GO:0080008 CTD:80344
HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:AF267858 EMBL:AK027223 EMBL:AK057636
EMBL:AK074296 EMBL:BX161405 EMBL:BX247970 EMBL:BC008858
EMBL:BC067132 EMBL:AF130070 EMBL:AL833831 IPI:IPI00178972
IPI:IPI00328589 IPI:IPI00328631 RefSeq:NP_001156956.1
RefSeq:NP_079506.3 RefSeq:NP_852002.1 UniGene:Hs.525251
ProteinModelPortal:Q8TEB1 SMR:Q8TEB1 IntAct:Q8TEB1 STRING:Q8TEB1
PhosphoSite:Q8TEB1 DMDM:37538034 PaxDb:Q8TEB1 PRIDE:Q8TEB1
Ensembl:ENST00000396936 Ensembl:ENST00000396941
Ensembl:ENST00000446197 Ensembl:ENST00000559115 GeneID:80344
KEGG:hsa:80344 UCSC:uc001wlv.3 UCSC:uc001wlz.3 UCSC:uc001wmb.4
GeneCards:GC14P024583 HGNC:HGNC:20258 HPA:HPA031157 MIM:613317
neXtProt:NX_Q8TEB1 PharmGKB:PA165478701 InParanoid:Q8TEB1
OMA:RMLHQRE PhylomeDB:Q8TEB1 GenomeRNAi:80344 NextBio:70930
Bgee:Q8TEB1 CleanEx:HS_WDR23 Genevestigator:Q8TEB1
GermOnline:ENSG00000100897 Uniprot:Q8TEB1
Length = 546
Score = 120 (47.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 227 NGQYLLTNSNDRTIRIYD-NLLPLKNGLEALV--------DIEKGIAEPNGIEKMKMVGS 277
+ +YL++NS D+TI+++D + G+EA D K+K+ G
Sbjct: 366 DARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGD 425
Query: 278 KCLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGPK 336
L +R T + + G+ I S G K+ ++D +G++VK L K
Sbjct: 426 SSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTG--KVVVYDLLSGHIVKKLTNHK 483
Query: 337 EALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPD 377
+ D++WHP IVS S G + +W E + P+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQAEYFQDDMPE 524
Score = 56 (24.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 26 MKCIAF-NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS----VCW--SKY 78
+ +AF + +L +G D C +WD T +E D + V A+ + + SK
Sbjct: 310 VNAVAFADISSQILFSGGDDAICKVWDRRTM---RE-DDPKPVGALAGHQDGITFIDSKG 365
Query: 79 GHRILVS-AADKSLTLWDV 96
R L+S + D+++ LWD+
Sbjct: 366 DARYLISNSKDQTIKLWDI 384
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
FTP F + + D +++ N GE H + +R P + +I S +G+ +
Sbjct: 226 FTPDGNHFLYSSWSDYIHICNIYGE--GDTHTALDLR---PDERRFAVFSIAVSSDGREV 280
Query: 232 LTNSNDRTIRIYD 244
L +ND + ++D
Sbjct: 281 LGGANDGCLYVFD 293
Score = 47 (21.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 29 IAFNRRGT-LLAAGCSD--GSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+AF G L + SD C I+ A +LR E A+ S+ S G +L
Sbjct: 224 VAFTPDGNHFLYSSWSDYIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREVLGG 283
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQA 114
A D L ++D + + +I + + A
Sbjct: 284 ANDGCLYVFDREQNRRTLQIESHEDDVNA 312
Score = 47 (21.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/90 (17%), Positives = 39/90 (43%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK--ELRDKECVAAITSVCWSKYGHRILVS 85
C +++ G + + C D + ++D K ++ ++ ++ V ++ G+ L S
Sbjct: 177 CGIYSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYS 236
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQAR 115
+ + + ++ GE T L P + R
Sbjct: 237 SWSDYIHICNIY-GEGDTHTALDLRPDERR 265
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 215 GAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLLPLKNGLEALVDIEKGIAE----PNGIE 270
G ++++ FS +G+YL T D+ IRI+D + K L E+ I +G
Sbjct: 345 GDLYVRSVAFSPDGKYLATGVEDQQIRIWD--IAQKRVYRLLTGHEQEIYSLDFSKDGKT 402
Query: 271 KMKMVGSKCLALFR-EFQDSITKMHWK----APCFSGDGEWVIAGSASKGEHKIYIWDRA 325
+ G + + L+ E + +H FS DG+++ AGS K I IW +
Sbjct: 403 LVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDK---VIRIWTSS 459
Query: 326 GYLVKILEGPKEALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTEN 370
G LV+ L G +E++ +A+ P +VS SL + +W N
Sbjct: 460 GTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSN 504
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 73/316 (23%), Positives = 136/316 (43%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
A++SV +S G + S+ADK + +W G+ ++T +L G S +
Sbjct: 21 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK------FEKTISGHKL--GISDVAWS-- 70
Query: 129 CPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC-FNKYGDL 187
S + ++V S T + + DV++G + +S+ F C FN +L
Sbjct: 71 ---SDSNLLVSASDDKT----LKIWDVSSGKCLKTLKGHSNYV--F----CCNFNPQSNL 117
Query: 188 VYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL 247
+ G+ + + D K+ + +P V + F+R+G ++++S D RI+D
Sbjct: 118 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 248 PLKNGLEALVDIEKGIAE-----PNGIEKMKMVGSKCLALFREFQDSITKMHW----KAP 298
L+ L+D + PNG + L L+ + K + +
Sbjct: 177 G--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 234
Query: 299 C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPIIV 352
C FS G+W+++GS ++ +YIW+ + +V+ L+G + +I A HP II
Sbjct: 235 CIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 291
Query: 353 SVSLTG--WVYIWAKD 366
S +L + +W D
Sbjct: 292 SAALENDKTIKLWKSD 307
>UNIPROTKB|F1MVT2 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 IPI:IPI00710208 UniGene:Bt.20137
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:DAAA02028032 ProteinModelPortal:F1MVT2
Ensembl:ENSBTAT00000028515 ArrayExpress:F1MVT2 Uniprot:F1MVT2
Length = 546
Score = 118 (46.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 227 NGQYLLTNSNDRTIRIYD-NLLPLKNGLEALV--------DIEKGIAEPNGIEKMKMVGS 277
+ +YL++NS D+TI+++D + G+EA D K+K+ G
Sbjct: 366 DARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGD 425
Query: 278 KCLALFREFQDSITKMHWK-APCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGP 335
L +R T + + +P S +++ +G S G K+ ++D +G++VK L
Sbjct: 426 SSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSG-CSTG--KVVVYDLLSGHIVKKLTTH 482
Query: 336 KEALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPD 377
K + D++WHP IVS S G + +W E + P+
Sbjct: 483 KACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQAEYFQDDMPE 524
Score = 56 (24.8 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 26 MKCIAF-NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS----VCW--SKY 78
+ +AF + +L +G D C +WD T +E D + V A+ + + SK
Sbjct: 310 VNAVAFADVSSQILFSGGDDAICKVWDRRTM---RE-DDPKPVGALAGHQDGITFIDSKG 365
Query: 79 GHRILVS-AADKSLTLWDV 96
R L+S + D+++ LWD+
Sbjct: 366 DARYLISNSKDQTIKLWDI 384
Score = 51 (23.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
FTP F + + D +++ N GE H + +R P + +I S +G+ +
Sbjct: 226 FTPDGNHFLYSSWSDYIHICNIYGE--GDTHTALDLR---PDERRFAVFSIAVSSDGREV 280
Query: 232 LTNSNDRTIRIYD 244
L +ND + ++D
Sbjct: 281 LGGANDGCLYVFD 293
Score = 47 (21.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 29 IAFNRRGT-LLAAGCSD--GSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+AF G L + SD C I+ A +LR E A+ S+ S G +L
Sbjct: 224 VAFTPDGNHFLYSSWSDYIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREVLGG 283
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQA 114
A D L ++D + + +I + + A
Sbjct: 284 ANDGCLYVFDREQNRRTLQIESHEDDVNA 312
Score = 47 (21.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 16/90 (17%), Positives = 39/90 (43%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK--ELRDKECVAAITSVCWSKYGHRILVS 85
C +++ G + + C D + ++D K ++ ++ ++ V ++ G+ L S
Sbjct: 177 CGIYSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYS 236
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQAR 115
+ + + ++ GE T L P + R
Sbjct: 237 SWSDYIHICNIY-GEGDTHTALDLRPDERR 265
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 73/316 (23%), Positives = 136/316 (43%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
A++SV +S G + S+ADK + +W G+ ++T +L G S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK------FEKTISGHKL--GISDVAWS-- 96
Query: 129 CPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC-FNKYGDL 187
S + ++V S T + + DV++G + +S+ F C FN +L
Sbjct: 97 ---SDSNLLVSASDDKT----LKIWDVSSGKCLKTLKGHSNYV--F----CCNFNPQSNL 143
Query: 188 VYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL 247
+ G+ + + D K+ + +P V + F+R+G ++++S D RI+D
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 248 PLKNGLEALVDIEKGIAE-----PNGIEKMKMVGSKCLALFREFQDSITKMHW----KAP 298
L+ L+D + PNG + L L+ + K + +
Sbjct: 203 G--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 299 C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPIIV 352
C FS G+W+++GS ++ +YIW+ + +V+ L+G + +I A HP II
Sbjct: 261 CIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 353 SVSLTG--WVYIWAKD 366
S +L + +W D
Sbjct: 318 SAALENDKTIKLWKSD 333
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 73/316 (23%), Positives = 136/316 (43%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
A++SV +S G + S+ADK + +W G+ ++T +L G S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK------FEKTISGHKL--GISDVAWS-- 96
Query: 129 CPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC-FNKYGDL 187
S + ++V S T + + DV++G + +S+ F C FN +L
Sbjct: 97 ---SDSNLLVSASDDKT----LKIWDVSSGKCLKTLKGHSNYV--F----CCNFNPQSNL 143
Query: 188 VYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL 247
+ G+ + + D K+ + +P V + F+R+G ++++S D RI+D
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 248 PLKNGLEALVDIEKGIAE-----PNGIEKMKMVGSKCLALFREFQDSITKMHW----KAP 298
L+ L+D + PNG + L L+ + K + +
Sbjct: 203 G--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 299 C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPIIV 352
C FS G+W+++GS ++ +YIW+ + +V+ L+G + +I A HP II
Sbjct: 261 CIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 353 SVSLTG--WVYIWAKD 366
S +L + +W D
Sbjct: 318 SAALENDKTIKLWKSD 333
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 73/316 (23%), Positives = 136/316 (43%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
A++SV +S G + S+ADK + +W G+ ++T +L G S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK------FEKTISGHKL--GISDVAWS-- 96
Query: 129 CPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC-FNKYGDL 187
S + ++V S T + + DV++G + +S+ F C FN +L
Sbjct: 97 ---SDSNLLVSASDDKT----LKIWDVSSGKCLKTLKGHSNYV--F----CCNFNPQSNL 143
Query: 188 VYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL 247
+ G+ + + D K+ + +P V + F+R+G ++++S D RI+D
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 248 PLKNGLEALVDIEKGIAE-----PNGIEKMKMVGSKCLALFREFQDSITKMHW----KAP 298
L+ L+D + PNG + L L+ + K + +
Sbjct: 203 G--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 299 C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPIIV 352
C FS G+W+++GS ++ +YIW+ + +V+ L+G + +I A HP II
Sbjct: 261 CIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 353 SVSLTG--WVYIWAKD 366
S +L + +W D
Sbjct: 318 SAALENDKTIKLWKSD 333
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 73/316 (23%), Positives = 136/316 (43%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
A++SV +S G + S+ADK + +W G+ ++T +L G S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK------FEKTISGHKL--GISDVAWS-- 96
Query: 129 CPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC-FNKYGDL 187
S + ++V S T + + DV++G + +S+ F C FN +L
Sbjct: 97 ---SDSNLLVSASDDKT----LKIWDVSSGKCLKTLKGHSNYV--F----CCNFNPQSNL 143
Query: 188 VYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL 247
+ G+ + + D K+ + +P V + F+R+G ++++S D RI+D
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 248 PLKNGLEALVDIEKGIAE-----PNGIEKMKMVGSKCLALFREFQDSITKMHW----KAP 298
L+ L+D + PNG + L L+ + K + +
Sbjct: 203 G--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 299 C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPIIV 352
C FS G+W+++GS ++ +YIW+ + +V+ L+G + +I A HP II
Sbjct: 261 CIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 353 SVSLTG--WVYIWAKD 366
S +L + +W D
Sbjct: 318 SAALENDKTIKLWKSD 333
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 73/316 (23%), Positives = 136/316 (43%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
A++SV +S G + S+ADK + +W G+ ++T +L G S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK------FEKTISGHKL--GISDVAWS-- 96
Query: 129 CPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC-FNKYGDL 187
S + ++V S T + + DV++G + +S+ F C FN +L
Sbjct: 97 ---SDSNLLVSASDDKT----LKIWDVSSGKCLKTLKGHSNYV--F----CCNFNPQSNL 143
Query: 188 VYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL 247
+ G+ + + D K+ + +P V + F+R+G ++++S D RI+D
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 248 PLKNGLEALVDIEKGIAE-----PNGIEKMKMVGSKCLALFREFQDSITKMHW----KAP 298
L+ L+D + PNG + L L+ + K + +
Sbjct: 203 G--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 299 C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPIIV 352
C FS G+W+++GS ++ +YIW+ + +V+ L+G + +I A HP II
Sbjct: 261 CIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 353 SVSLTG--WVYIWAKD 366
S +L + +W D
Sbjct: 318 SAALENDKTIKLWKSD 333
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 94 (38.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 25 VMKCIAFNRRGTLLAAGCSDGSCVIWDFETR-GIAKELRDKECVAAITSVCWSKYGHRIL 83
VM C A+ G +A G D C I++ +TR G K R+ S C + I+
Sbjct: 100 VMTC-AYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIV 158
Query: 84 VSAADKSLTLWDVLKGEKIT 103
S+ D + LWD+ G++ T
Sbjct: 159 TSSGDTTCALWDIETGQQKT 178
Score = 75 (31.5 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 178 AACFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVI---KNIVFSRNGQYLLTN 234
A CF G+ + G+ + D +++Q L+ S ++I ++ FSR+G+ LL
Sbjct: 231 AICFFPNGEAICTGSDDATCRLFDLRADQ--ELIVYSHESIICGITSVAFSRSGRLLLAG 288
Query: 235 SNDRTIRIYDNLLPLKNGL 253
+D I+D+L + G+
Sbjct: 289 YDDFNCNIWDSLKAERVGI 307
>TAIR|locus:2159697 [details] [associations]
symbol:AT5G50550 "AT5G50550" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AB025619 KO:K14003 HOGENOM:HOG000070543
ProtClustDB:CLSN2683533 EMBL:BT029728 EMBL:AK221493 IPI:IPI00529177
RefSeq:NP_568738.1 RefSeq:NP_680414.1 UniGene:At.49156
ProteinModelPortal:Q9FGP3 SMR:Q9FGP3 STRING:Q9FGP3 PaxDb:Q9FGP3
PRIDE:Q9FGP3 EnsemblPlants:AT5G50550.1 EnsemblPlants:AT5G50650.1
GeneID:835123 GeneID:835135 KEGG:ath:AT5G50550 KEGG:ath:AT5G50650
TAIR:At5g50550 TAIR:At5g50650 InParanoid:Q9FGP3 OMA:ASSHEHY
PhylomeDB:Q9FGP3 ArrayExpress:Q9FGP3 Genevestigator:Q9FGP3
Uniprot:Q9FGP3
Length = 383
Score = 100 (40.3 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 5 IIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDK 64
I D + + +V++E + G ++FN+ GT+LA G DG+ + FE + L +
Sbjct: 124 IEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRV--FEWPSMKTLLNES 181
Query: 65 ECVAAITSVCWSKYGHRILVSAADKSLTLWDV 96
+ A++ S+ +S+ G + LVS +WDV
Sbjct: 182 KTHASVKSLTFSESG-KFLVSLGAPLCRVWDV 212
Score = 70 (29.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 185 GDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRI 242
G L+ VG +G++L+ID Q +V + ++ + FS + + L++ S D R+
Sbjct: 287 GKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARL 344
>TAIR|locus:2832497 [details] [associations]
symbol:AT5G50650 "AT5G50650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AB025619 KO:K14003 HOGENOM:HOG000070543
ProtClustDB:CLSN2683533 EMBL:BT029728 EMBL:AK221493 IPI:IPI00529177
RefSeq:NP_568738.1 RefSeq:NP_680414.1 UniGene:At.49156
ProteinModelPortal:Q9FGP3 SMR:Q9FGP3 STRING:Q9FGP3 PaxDb:Q9FGP3
PRIDE:Q9FGP3 EnsemblPlants:AT5G50550.1 EnsemblPlants:AT5G50650.1
GeneID:835123 GeneID:835135 KEGG:ath:AT5G50550 KEGG:ath:AT5G50650
TAIR:At5g50550 TAIR:At5g50650 InParanoid:Q9FGP3 OMA:ASSHEHY
PhylomeDB:Q9FGP3 ArrayExpress:Q9FGP3 Genevestigator:Q9FGP3
Uniprot:Q9FGP3
Length = 383
Score = 100 (40.3 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 5 IIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDK 64
I D + + +V++E + G ++FN+ GT+LA G DG+ + FE + L +
Sbjct: 124 IEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRV--FEWPSMKTLLNES 181
Query: 65 ECVAAITSVCWSKYGHRILVSAADKSLTLWDV 96
+ A++ S+ +S+ G + LVS +WDV
Sbjct: 182 KTHASVKSLTFSESG-KFLVSLGAPLCRVWDV 212
Score = 70 (29.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 185 GDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRI 242
G L+ VG +G++L+ID Q +V + ++ + FS + + L++ S D R+
Sbjct: 287 GKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARL 344
>UNIPROTKB|Q5E9I8 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 EMBL:BT020932 IPI:IPI00710208
RefSeq:NP_001014954.1 UniGene:Bt.20137 ProteinModelPortal:Q5E9I8
STRING:Q5E9I8 GeneID:539433 KEGG:bta:539433 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 InParanoid:Q5E9I8 KO:K11801
OrthoDB:EOG44TP7K NextBio:20877986 InterPro:IPR017399
PIRSF:PIRSF038135 Uniprot:Q5E9I8
Length = 546
Score = 117 (46.2 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 227 NGQYLLTNSNDRTIRIYD-NLLPLKNGLEALV--------DIEKGIAEPNGIEKMKMVGS 277
+ +YL++NS D+TI+++D + G+EA D K+K+ G
Sbjct: 366 DARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGD 425
Query: 278 KCLALFREFQDSITKMHWK-APCFSGDGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGP 335
L +R T + + +P S +++ +G S G K+ ++D +G++VK L
Sbjct: 426 SSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSG-CSTG--KVVVYDLLSGHVVKKLTTH 482
Query: 336 KEALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAPD 377
K + D++WHP IVS S G + +W E + P+
Sbjct: 483 KACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQAEYFQDDMPE 524
Score = 56 (24.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 26 MKCIAF-NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS----VCW--SKY 78
+ +AF + +L +G D C +WD T +E D + V A+ + + SK
Sbjct: 310 VNAVAFADVSSQILFSGGDDAICKVWDRRTM---RE-DDPKPVGALAGHQDGITFIDSKG 365
Query: 79 GHRILVS-AADKSLTLWDV 96
R L+S + D+++ LWD+
Sbjct: 366 DARYLISNSKDQTIKLWDI 384
Score = 51 (23.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 174 FTPTAACF--NKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
FTP F + + D +++ N GE H + +R P + +I S +G+ +
Sbjct: 226 FTPDGNHFLYSSWSDYIHICNIYGE--GDTHTALDLR---PDERRFAVFSIAVSSDGREV 280
Query: 232 LTNSNDRTIRIYD 244
L +ND + ++D
Sbjct: 281 LGGANDGCLYVFD 293
Score = 47 (21.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 29 IAFNRRGT-LLAAGCSD--GSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
+AF G L + SD C I+ A +LR E A+ S+ S G +L
Sbjct: 224 VAFTPDGNHFLYSSWSDYIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREVLGG 283
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQA 114
A D L ++D + + +I + + A
Sbjct: 284 ANDGCLYVFDREQNRRTLQIESHEDDVNA 312
Score = 47 (21.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 16/90 (17%), Positives = 39/90 (43%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAK--ELRDKECVAAITSVCWSKYGHRILVS 85
C +++ G + + C D + ++D K ++ ++ ++ V ++ G+ L S
Sbjct: 177 CGIYSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYS 236
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQAR 115
+ + + ++ GE T L P + R
Sbjct: 237 SWSDYIHICNIY-GEGDTHTALDLRPDERR 265
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 89 (36.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA-AITSVCWSKYGHRI 82
GV F G LL + D +W E G + LR + A+ +C++ G +
Sbjct: 155 GVSAVRLFPLSGHLLLSCSMDCKIKLW--EVYGDRRCLRTFIGHSKAVRDICFNTAGTQF 212
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ L LWD G+ I+R ++ P + +P +L +A
Sbjct: 213 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 258
Score = 83 (34.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L G S +I+ D +S +I AV IVF + ++ S+D+++R+++
Sbjct: 254 NLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV-NTIVFVDENRRFVSTSDDKSLRVWEW 312
Query: 246 LLPL--KNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P+ K E + + PNG + + ++ L FR + I K H
Sbjct: 313 DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 372
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +VI+G G K+ IWD + L + + I WHP H
Sbjct: 373 AGYACQVDFSPDMSYVISGD---GNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP-HET 428
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 429 SKVITCGWDGLIKLW 443
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 89 (36.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA-AITSVCWSKYGHRI 82
GV F G LL + D +W E G + LR + A+ +C++ G +
Sbjct: 158 GVSAVRLFPLSGHLLLSCSMDCKIKLW--EVYGDRRCLRTFIGHSKAVRDICFNTAGTQF 215
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ L LWD G+ I+R ++ P + +P +L +A
Sbjct: 216 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 261
Score = 83 (34.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L G S +I+ D +S +I AV IVF + ++ S+D+++R+++
Sbjct: 257 NLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV-NTIVFVDENRRFVSTSDDKSLRVWEW 315
Query: 246 LLPL--KNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P+ K E + + PNG + + ++ L FR + I K H
Sbjct: 316 DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 375
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +VI+G G K+ IWD + L + + I WHP H
Sbjct: 376 AGYACQVDFSPDMSYVISGD---GNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP-HET 431
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 432 SKVITCGWDGLIKLW 446
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 124 (48.7 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 73/316 (23%), Positives = 136/316 (43%)
Query: 69 AITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
A++SV +S G + S+ADK + +W G+ ++T +L G S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK------FEKTISGHKL--GISDVAWS-- 96
Query: 129 CPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC-FNKYGDL 187
S + ++V S T + + DV++G + +S+ F C FN +L
Sbjct: 97 ---SDSNLLVSASDDKT----LKIWDVSSGKCLKTLKGHSNYV--F----CCNFNPQSNL 143
Query: 188 VYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL 247
+ G+ + + D K+ + +P V + F+R+G ++++S D RI+D
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 248 PLKNGLEALVDIEKGIAE-----PNGIEKMKMVGSKCLALFREFQDSITKMHW----KAP 298
L+ L+D + PNG + L L+ + K + +
Sbjct: 203 G--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKY 260
Query: 299 C----FS-GDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPIIV 352
C FS G+W+++GS ++ +YIW+ + +V+ L+G + +I A HP II
Sbjct: 261 CIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIA 317
Query: 353 SVSLTG--WVYIWAKD 366
S +L + +W D
Sbjct: 318 SAALENDKTIKLWKSD 333
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 124 (48.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 32/92 (34%), Positives = 48/92 (52%)
Query: 19 EYLEHGV-MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGI--AKELRDKECVAAITSVCW 75
EY H + +A+N GT LA+G D + IW+ E G AK+L K ++ +CW
Sbjct: 15 EYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW 74
Query: 76 S-KYGHRILVSAADKSLTLWDVLKGEKITRIV 106
K+ + ++ DKS+ LWD G K T+ V
Sbjct: 75 DPKHSDLVATASGDKSVRLWDARSG-KCTQQV 105
Score = 40 (19.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 219 IKNIVFSRNGQYLLTNSNDRTIRI 242
++ I F+ +G+Y+ + S D I I
Sbjct: 236 VRTISFNYSGEYIASASEDLFIDI 259
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 89 (36.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/106 (26%), Positives = 47/106 (44%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA-AITSVCWSKYGHRI 82
GV F G +L + D +W E G + LR A+ +C++ G R
Sbjct: 291 GVSAVRLFPLSGHMLLSCSMDCKIKLW--EVYGDRRCLRTFIGHGKAVRDICFNNAGTRF 348
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ + LWD G+ I+R ++ P + +P +L +A
Sbjct: 349 LSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 394
Score = 85 (35.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L G S +I+ D +S +I AV IVF + ++ S+D+++R+++
Sbjct: 390 NLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV-NTIVFVDENRRFVSTSDDKSLRVWEW 448
Query: 246 LLPL--KNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P+ K E + + PNG + + ++ L FR + I K H
Sbjct: 449 DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 508
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +VI+G A + K+ IWD + L ++ + I WHP H
Sbjct: 509 AGYACQVDFSPDMSYVISGDA---DGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHP-HET 564
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 565 SKVITCGWDGLIKLW 579
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 88 (36.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
I+++ G LA+ D + +I F+ + + R + + + WS +L + D
Sbjct: 219 ISYSHNGRYLASASKDKTAII--FDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCD 276
Query: 89 KSLTLWDVLKGEKI 102
KS+ LWD GEK+
Sbjct: 277 KSVILWDAFTGEKL 290
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 299 CFSG-DGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGPKEALIDLAWHPVHPI-IVSVS 355
CF G D +V++GS + KI IW R +G L+ L G + + +A++PV P S
Sbjct: 434 CFGGKDDTFVLSGSE---DDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAG 490
Query: 356 LTGWVYIWA-KD 366
V IW+ KD
Sbjct: 491 DDNTVRIWSNKD 502
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 213 VSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYD 244
+S + + +I S++ +Y LTN T ++D
Sbjct: 380 ISLQSKVTSICLSKDSKYALTNLEPHTTFLWD 411
>ZFIN|ZDB-GENE-050809-116 [details] [associations]
symbol:dcaf11 "ddb1 and cul4 associated factor 11"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050809-116 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:80344 HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801
OrthoDB:EOG44TP7K InterPro:IPR017399 PIRSF:PIRSF038135
GeneTree:ENSGT00700000104507 OMA:RMLHQRE EMBL:CR405710
EMBL:BC099999 IPI:IPI00491931 RefSeq:NP_001026845.1
UniGene:Dr.134153 STRING:Q499B0 Ensembl:ENSDART00000002992
GeneID:567578 KEGG:dre:567578 InParanoid:Q499B0 NextBio:20888741
Uniprot:Q499B0
Length = 541
Score = 107 (42.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 43/156 (27%), Positives = 75/156 (48%)
Query: 227 NGQYLLTNSNDRTIRIYD--NLLPLKNGLEA--LV------DIEKGIAEPNGIEKMKMVG 276
+ +YL++NS D+TI+++D P K GL A L D +++ K+ G
Sbjct: 370 DARYLISNSKDQTIKLWDVRKFSP-KEGLAASRLAVTQQNWDYRWQQVPQRALKRHKLTG 428
Query: 277 SKCLALFREFQDSITKMHWK-APCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEG 334
+ +R T + + +P FS +++ G S G KI I+D G +V L
Sbjct: 429 DTSVMTYRGHGVLHTLIRCRFSPEFSTGQKFIYTG-CSTG--KIVIYDVLTGSVVCKLSN 485
Query: 335 PKEALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTEN 370
+ D++WHP + +VS S G + +W ++T+N
Sbjct: 486 HDACVRDVSWHPYNNNMVSSSWDGAIRLW--EHTQN 519
Score = 64 (27.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 26 MKCIAF-NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKEC--VAA----ITSVCWSKY 78
+ +AF + LL +G D C +WD T +E R + +A IT + SK
Sbjct: 314 VNAVAFADSSSQLLFSGSDDALCKVWDRRT---LREDRPQPVGHLAGHRDGITFI-HSKG 369
Query: 79 GHRILVS-AADKSLTLWDVLK 98
R L+S + D+++ LWDV K
Sbjct: 370 DARYLISNSKDQTIKLWDVRK 390
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 19/91 (20%), Positives = 41/91 (45%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRG---IAKELRDKECVAAITSVCWSKYGHRILV 84
C ++ G + + C D + ++D +RG + K ++ ++ +I VC++ +L
Sbjct: 181 CGVYSDEGNMFLSACQDQNIRLYD-TSRGRFTLKKTVKARDVGWSILDVCFTPDARCVLY 239
Query: 85 SAADKSLTLWDVLKGEKITRIVLQQTPLQAR 115
S+ + + V G+ T L P + R
Sbjct: 240 SSWSDYIHVCSV-DGDNETHTALDLNPDERR 269
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 89 (36.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 45/189 (23%), Positives = 83/189 (43%)
Query: 191 GNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLLP-- 248
G S +I+ D KSNQI AV I F + + +T+S+D+++R++D +P
Sbjct: 410 GGSDKKIIQWDIKSNQIVQEYDQHLGAV-NTITFLDDNRRFVTSSDDKSLRVWDWGIPVV 468
Query: 249 LKNGLEALVDIEKGIA-EPNG--IEKMKMVGSKCLALFRE-FQDSITKM---HWKA--PC 299
+K + + +A P G + + R+ F+ + K H + C
Sbjct: 469 IKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGHNVSGYAC 528
Query: 300 ---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI-IVSV 354
FS DG+++ +G S G K + WD + ++K + I + W P+ P + +
Sbjct: 529 QLGFSPDGKFIYSGD-STG--KAFFWDWKTSKIIKTINAHNNVCIGIEWAPLEPSKVATC 585
Query: 355 SLTGWVYIW 363
S + +W
Sbjct: 586 SWNNEIKLW 594
Score = 84 (34.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/108 (25%), Positives = 45/108 (41%)
Query: 15 EVIEEYLEH--GVMKCIAFNRRGTLLAAGCSDGSCVIWDF--ETRGIAKELRDKECVAAI 70
++I Y H GV + G LL + D + IWD + R I + + A+
Sbjct: 295 KLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQ---AV 351
Query: 71 TSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHP 118
+C+S G R L D+ LWD G+ ++ + P + +P
Sbjct: 352 RDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYCIKFNP 399
>WB|WBGene00008419 [details] [associations]
symbol:wdr-23 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0080135 "regulation of
cellular response to stress" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122 KO:K11801
InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906 PIR:T20359
PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 54/214 (25%), Positives = 92/214 (42%)
Query: 178 AACFNKYG-DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVF---SRNGQ-YLL 232
+ CF G +L+Y G + V D ++ + PV A ++ V SR + YLL
Sbjct: 316 SVCFADLGSNLIYSAGDDGLVKVWDKRAWSDGDVEPVGVFAGHRDGVTHVDSRQDERYLL 375
Query: 233 TNSNDRTIRIYDNLLPLKN--GLEAL---VDIE----KGIAEPNGIEKMKMVGSKCLALF 283
+NS D+TI+++D L N G+EA V + + P G+ + + G +
Sbjct: 376 SNSKDQTIKVWD-LRKFSNMSGVEATRACVQSQHWDYRWQPAPPGLCQ-PVAGDTSVMTL 433
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDL 342
R T + S ++ G A +GE + ++D +G + + L+G + +
Sbjct: 434 RGHSVLHTLVRANFSPESTGRRYIYTGCA-RGE--VVVYDIMSGTVSRRLKGHTAVVREC 490
Query: 343 AWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAP 376
WHP IVS + G +W D + AP
Sbjct: 491 DWHPTENEIVSSAWDGVTTVWTWDERQE-GVIAP 523
Score = 76 (31.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 22 EHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHR 81
+H + C+ F+ + G S S ++D E R + + + + SVC++ G
Sbjct: 267 DHCAVFCVKFSDSSEQIVCGTSQYSIHVFDVEQRRRIRTIVNAH-EDDVNSVCFADLGSN 325
Query: 82 ILVSAADKSLT-LWD 95
++ SA D L +WD
Sbjct: 326 LIYSAGDDGLVKVWD 340
>UNIPROTKB|P90794 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0018991
GO:GO:0040010 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906
PIR:T20359 PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 54/214 (25%), Positives = 92/214 (42%)
Query: 178 AACFNKYG-DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVF---SRNGQ-YLL 232
+ CF G +L+Y G + V D ++ + PV A ++ V SR + YLL
Sbjct: 316 SVCFADLGSNLIYSAGDDGLVKVWDKRAWSDGDVEPVGVFAGHRDGVTHVDSRQDERYLL 375
Query: 233 TNSNDRTIRIYDNLLPLKN--GLEAL---VDIE----KGIAEPNGIEKMKMVGSKCLALF 283
+NS D+TI+++D L N G+EA V + + P G+ + + G +
Sbjct: 376 SNSKDQTIKVWD-LRKFSNMSGVEATRACVQSQHWDYRWQPAPPGLCQ-PVAGDTSVMTL 433
Query: 284 REFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDL 342
R T + S ++ G A +GE + ++D +G + + L+G + +
Sbjct: 434 RGHSVLHTLVRANFSPESTGRRYIYTGCA-RGE--VVVYDIMSGTVSRRLKGHTAVVREC 490
Query: 343 AWHPVHPIIVSVSLTGWVYIWAKDYTENWSAFAP 376
WHP IVS + G +W D + AP
Sbjct: 491 DWHPTENEIVSSAWDGVTTVWTWDERQE-GVIAP 523
Score = 76 (31.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 22 EHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHR 81
+H + C+ F+ + G S S ++D E R + + + + SVC++ G
Sbjct: 267 DHCAVFCVKFSDSSEQIVCGTSQYSIHVFDVEQRRRIRTIVNAH-EDDVNSVCFADLGSN 325
Query: 82 ILVSAADKSLT-LWD 95
++ SA D L +WD
Sbjct: 326 LIYSAGDDGLVKVWD 340
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 93 (37.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDF--ETRGIAKELRDKECVAAITSVCWSKYGHR 81
GV F + G LL + D +W+ E R + + + A+ VC++ G +
Sbjct: 289 GVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSK---AVRDVCFNNSGTQ 345
Query: 82 ILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ + LWD G+ I+R ++ P + +P +L +A
Sbjct: 346 FLSAAYDRYIKLWDSETGQCISRFTNRKVPYCVKFNPDEDKQNLLVA 392
Score = 79 (32.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 45/195 (23%), Positives = 84/195 (43%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L+ G S +I+ D +S ++ AV I F + ++ S+D+++R+++
Sbjct: 388 NLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV-NTITFVDENRRFVSTSDDKSLRVWEW 446
Query: 246 LLP--LKNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P K E + + PNG + + ++ L FR + I K H
Sbjct: 447 DIPADFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 506
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +V++G A + K+ IWD + L ++ + I WHP H
Sbjct: 507 AGYACQVDFSPDMSYVVSGDA---DGKLNIWDWKTTKLYHRIKAHDKVCISALWHP-HET 562
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 563 SKVITCGWDGQIKLW 577
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 98 (39.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/92 (25%), Positives = 51/92 (55%)
Query: 283 FRE-FQDSITKMHWKAPCFSG-DGEWVIAGSASKGEHKIYIWDR-AGYLVKILEGPKEAL 339
F++ + +++ K+ F G + E++++GS + K++IWD+ + +V+ILEG +
Sbjct: 769 FKQVYSGHVSEQTIKSVNFYGPNSEYIVSGS---DDSKLFIWDKESAKIVRILEGHDSHV 825
Query: 340 IDLAWHPVHPIIVSVSLTGWVYIW--AKDYTE 369
+ HP P I + + ++ +W K+Y +
Sbjct: 826 NSVVCHPNEPCIATSGIDPYICLWEPTKEYPD 857
Score = 78 (32.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 57/243 (23%), Positives = 98/243 (40%)
Query: 32 NRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADKSL 91
N + +G +D +D E + + V + SVC ++ L S++D S+
Sbjct: 99 NNDNRKVISGGNDADIRYYDIENQKCTVYKHHSKKVLKL-SVCPTQ-PQVFLSSSSDGSV 156
Query: 92 TLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLACPLSSAPMIVDLSTGSTSILPIA 151
L+DV K T I P+Q P ++ + P ++ G T LP+
Sbjct: 157 RLFDVRLKYKDTEI----QPIQTA--PSNNDGYRAIL------PQVIGGGRGRTMALPLQ 204
Query: 152 VP---DVANGIAPSSRNKYSDGTPPFTPTAACFNKYGDLVYVGNSKGEILVIDHKSNQIR 208
+ +PSS S T T N+ + Y GNS L+I+ +R
Sbjct: 205 QQLQQSTSTTDSPSSSITTSTTTTTTTTNKTTLNE-NPIKY-GNS----LLINFDPLPLR 258
Query: 209 ALVPVSGAAVIKNIVFSR-----NGQYLLTNSNDRTIRIYDNLLPLKNGLEALVDIEKGI 263
S ++ K +FS +G +T S+D T+R++D + + E+ V+I + I
Sbjct: 259 RSFRYS-ISIPKTTIFSVEYHPFDGYSFITASSDGTVRLFDQRMIPNHSSESFVNIYRNI 317
Query: 264 AEP 266
P
Sbjct: 318 EVP 320
>FB|FBgn0037094 [details] [associations]
symbol:CG7611 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063585
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 OMA:IRGQFYQ
EMBL:AY069717 RefSeq:NP_001163489.1 RefSeq:NP_649326.1
RefSeq:NP_730644.1 RefSeq:NP_730645.1 RefSeq:NP_730646.1
RefSeq:NP_730647.1 RefSeq:NP_730648.1 RefSeq:NP_730649.1
RefSeq:NP_730650.1 UniGene:Dm.7009 ProteinModelPortal:Q7K0L4
SMR:Q7K0L4 IntAct:Q7K0L4 STRING:Q7K0L4 PaxDb:Q7K0L4 PRIDE:Q7K0L4
EnsemblMetazoa:FBtr0078359 EnsemblMetazoa:FBtr0078361
EnsemblMetazoa:FBtr0078362 EnsemblMetazoa:FBtr0078363
EnsemblMetazoa:FBtr0078364 EnsemblMetazoa:FBtr0078365
EnsemblMetazoa:FBtr0078366 EnsemblMetazoa:FBtr0301197
EnsemblMetazoa:FBtr0301198 GeneID:40386 KEGG:dme:Dmel_CG7611
FlyBase:FBgn0037094 InParanoid:Q7K0L4 OrthoDB:EOG4BG7B3
PhylomeDB:Q7K0L4 GenomeRNAi:40386 NextBio:818511 Bgee:Q7K0L4
Uniprot:Q7K0L4
Length = 630
Score = 87 (35.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 32/94 (34%), Positives = 47/94 (50%)
Query: 275 VGSKCLALFREFQDSITKMHWKA-PCFSGDGE-WVIAGSASKGEHKIYIWD--RAGYLVK 330
+ KCL R FQ I + ++ CF G E +V +GS K +YIW R L K
Sbjct: 516 IEDKCLV--RRFQ-GIRQSNFAIHSCFGGVNESFVASGSEDK---VVYIWHIKREEPLAK 569
Query: 331 ILEGPKEALIDLAWHPVHP-IIVSVSLTGWVYIW 363
L G + + ++W+PV+P ++ S S V IW
Sbjct: 570 -LAGHTKTVNCVSWNPVYPSLLASASDDATVRIW 602
Score = 86 (35.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 13 FP-EVIEEYLEH--GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELR---DKEC 66
FP + I+ +H V C F+ G LA G D + +IWD + + + R D +
Sbjct: 302 FPMQTIQILTDHCDEVWFC-KFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQA 360
Query: 67 VAAITSVCWSKYGHRILVSAADKS--LTLWDVLKGEKITR 104
+++ V WS ILV + S L +W+V G+ + +
Sbjct: 361 QLSVSFVSWSPDSKLILVGGTEDSHELYIWNVDDGKLVVK 400
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA-AITSVCWSKYGHRI 82
GV F G LL + D +W E G + LR + A+ +C++ G +
Sbjct: 290 GVSAVRLFPLSGHLLLSCSMDCKIKLW--EVYGDRRCLRTFIGHSKAVRDICFNTAGTQF 347
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ L LWD G+ I+R ++ P + +P +L +A
Sbjct: 348 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 393
Score = 83 (34.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L G S +I+ D +S +I AV IVF + ++ S+D+++R+++
Sbjct: 389 NLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV-NTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 246 LLPL--KNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P+ K E + + PNG + + ++ L FR + I K H
Sbjct: 448 DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 507
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +VI+G G K+ IWD + L + + I WHP H
Sbjct: 508 AGYACQVDFSPDMSYVISGD---GNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP-HET 563
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 564 SKVITCGWDGLIKLW 578
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDF--ETRGIAKELRDKECVAAITSVCWSKYGHR 81
GV F G LL + D +W+ E R + + + A+ +C++ G +
Sbjct: 290 GVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSK---AVRDICFNTAGTQ 346
Query: 82 ILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ L LWD G+ I+R ++ P + +P +L +A
Sbjct: 347 FLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 393
Score = 83 (34.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L G S +I+ D +S +I AV IVF + ++ S+D+++R+++
Sbjct: 389 NLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV-NTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 246 LLPL--KNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P+ K E + + PNG + + ++ L FR + I K H
Sbjct: 448 DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 507
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +VI+G G K+ IWD + L + + I WHP H
Sbjct: 508 AGYACQVDFSPDMSYVISGD---GNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP-HET 563
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 564 SKVITCGWDGLIKLW 578
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA-AITSVCWSKYGHRI 82
GV F G LL + D +W E G + LR + A+ +C++ G +
Sbjct: 290 GVSAVRLFPLSGHLLLSCSMDCKIKLW--EVYGDRRCLRTFIGHSKAVRDICFNTAGTQF 347
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ L LWD G+ I+R ++ P + +P +L +A
Sbjct: 348 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 393
Score = 83 (34.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L G S +I+ D +S +I AV IVF + ++ S+D+++R+++
Sbjct: 389 NLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV-NTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 246 LLPL--KNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P+ K E + + PNG + + ++ L FR + I K H
Sbjct: 448 DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 507
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +VI+G G K+ IWD + L + + I WHP H
Sbjct: 508 AGYACQVDFSPDMSYVISGD---GNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP-HET 563
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 564 SKVITCGWDGLIKLW 578
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA-AITSVCWSKYGHRI 82
GV F G LL + D +W E G + LR + A+ +C++ G +
Sbjct: 290 GVSAVRLFPLSGHLLLSCSMDCKIKLW--EVYGDRRCLRTFIGHSKAVRDICFNTAGTQF 347
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ L LWD G+ I+R ++ P + +P +L +A
Sbjct: 348 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 393
Score = 83 (34.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L G S +I+ D +S +I AV IVF + ++ S+D+++R+++
Sbjct: 389 NLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV-NTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 246 LLPL--KNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P+ K E + + PNG + + ++ L FR + I K H
Sbjct: 448 DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 507
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +VI+G G K+ IWD + L + + I WHP H
Sbjct: 508 AGYACQVDFSPDMSYVISGD---GNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP-HET 563
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 564 SKVITCGWDGLIKLW 578
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAA 87
C+AFN + TL+A G D + +WD E+ L A I S+C++ G R++ +
Sbjct: 182 CLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGH--FAEIISLCFNTTGDRLVTGSF 239
Query: 88 DKSLTLWDVLKGEKI 102
D + LWDV G K+
Sbjct: 240 DHTAILWDVPSGRKV 254
Score = 89 (36.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 5 IIDPLQGDFPEVIEEYLEHGVMKCIAFNRR-GTLLAAGCSDGSCVIWDFETRGIAKELRD 63
I D G+ +E + V+ IAFN G +A G D +C +W ET R
Sbjct: 118 IWDTASGEELHTLEGH--RNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRG 175
Query: 64 KECVAAITSVCWSKYGHRILVSAADKSLTLWDVLKGEKITRI 105
A I + ++ + + D + LWDV GE+++ +
Sbjct: 176 H--TAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTL 215
Score = 78 (32.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 43/199 (21%), Positives = 83/199 (41%)
Query: 180 CFNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSG-AAVIKNIVFSRNGQYLLTNSNDR 238
CFN GD + G+ ++ D S R + +SG I + F+ + + T S D+
Sbjct: 226 CFNTTGDRLVTGSFDHTAILWDVPSG--RKVHVLSGHRGEISCVQFNWDCSLIATASLDK 283
Query: 239 TIRIYDN-----LLPLKNGLEALVDI---EKG----IAEPNGIEKMKMVGS-KCLALFRE 285
+ +++D L L + ++D+ G A +G ++ + +CL
Sbjct: 284 SCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEG 343
Query: 286 FQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAW 344
+ I+K+ CF+ G V+ S K +W + G +++LEG + + A+
Sbjct: 344 HKGEISKV-----CFNAQGSRVLTASVDKTSR---VWCVKTGACLQVLEGHSDEIFSCAF 395
Query: 345 HPVHPIIVSVSLTGWVYIW 363
+ I++ S IW
Sbjct: 396 NYEGDTIITGSKDNTCRIW 414
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 49/186 (26%), Positives = 89/186 (47%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
F+ G L+ G++ I + D S ++ + ++V +++ FS NGQ L + S+D TI
Sbjct: 49 FSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSV-QSVAFSPNGQLLASGSSDTTI 107
Query: 241 RIYDNLLP-LKNGLEALVDIEKGIA-EPNGIEKMKMVGSKCLALFREFQDSITKMHWKAP 298
+++++ LK+ +E D + +A PNG +GS + D + +
Sbjct: 108 KLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTI-EGHSDWVLSV----- 161
Query: 299 CFSGDGEWVIAGSASKGEHKIYIWDRAGYLVK-ILEGPKEALIDLAWHPVHPIIVSVSLT 357
FS DG+ + +GSA K I +WD A +K L G ++ L + P ++ S S
Sbjct: 162 AFSPDGQLLASGSAEK---TIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSND 218
Query: 358 GWVYIW 363
+ +W
Sbjct: 219 ATIKLW 224
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 41/192 (21%), Positives = 83/192 (43%)
Query: 190 VGNSKGEILVIDHKSNQIRALVPVSG--AAVIKNIVFSRNGQYLLTNSNDRTIRIYDNLL 247
VG S +IL D + ++ + LV + I + + +G +++S D+T+RI++N +
Sbjct: 265 VGLSNSKILHYDDRVSENQGLVQTYDHHLSSILALKYFPDGSKFISSSEDKTVRIWENQI 324
Query: 248 --PLKNGLEALVDIEKGI-AEPNG----IEKM--KMVGSKCLALFREFQDSITKMHWKAP 298
P+K + + P+ + M ++ ++ I K H A
Sbjct: 325 NVPIKQISDTAQHSMPFLNVHPSQNYFCAQSMDNRIYSFSLKPKYKRHPKKIFKGHSSAG 384
Query: 299 -----CFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGP-KEALIDLAWHPVHPI- 350
FSGDG ++ +G SK +++ WD L+ ++ P + + + WHP
Sbjct: 385 YGISLAFSGDGRYICSGD-SKS--RLFTWDWNTSRLLNNIKIPGNKPITQVDWHPQETSK 441
Query: 351 IVSVSLTGWVYI 362
++ G +Y+
Sbjct: 442 VICSGAAGKIYV 453
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 15 EVIEEYLEH--GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECV-AAIT 71
+VI Y H G + G L+ +G +D + IWDF + LRD + I
Sbjct: 153 KVIRNYPGHPEGTTALKFLPKTGHLILSGGNDHTIKIWDFYHD--YECLRDFQGHNKPIK 210
Query: 72 SVCWSKYGHRILVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHP 118
++ +++ L S+ D+S+ +WD G+ TR+ L TP P
Sbjct: 211 ALRFTEDCQSFLSSSFDRSVKIWDTETGKVKTRLHLNSTPADVESRP 257
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 89 (36.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 24 GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVA-AITSVCWSKYGHRI 82
GV F G LL + D +W E G + LR + A+ +C++ G +
Sbjct: 374 GVSAVRLFPLSGHLLLSCSMDCKIKLW--EVYGDRRCLRTFIGHSKAVRDICFNTAGTQF 431
Query: 83 LVSAADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLA 128
L +A D+ L LWD G+ I+R ++ P + +P +L +A
Sbjct: 432 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 477
Score = 83 (34.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+L G S +I+ D +S +I AV IVF + ++ S+D+++R+++
Sbjct: 473 NLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV-NTIVFVDENRRFVSTSDDKSLRVWEW 531
Query: 246 LLPL--KNGLEALVDIEKGIA-EPNGIE-KMKMVGSKCLAL-----FREFQDSITKMHWK 296
+P+ K E + + PNG + + ++ L FR + I K H
Sbjct: 532 DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV 591
Query: 297 A--PC---FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPI 350
A C FS D +VI+G G K+ IWD + L + + I WHP H
Sbjct: 592 AGYACQVDFSPDMSYVISGD---GNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP-HET 647
Query: 351 --IVSVSLTGWVYIW 363
+++ G + +W
Sbjct: 648 SKVITCGWDGLIKLW 662
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 101 (40.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADKS 90
+N GTLLA G DG IW I+ + K I S+ W+K G +L + D++
Sbjct: 332 WNGEGTLLATGSCDGQARIWTLNGELISTLSKHK---GPIFSLKWNKKGDYLLTGSVDRT 388
Query: 91 LTLWDVLKGEK 101
+WDV K E+
Sbjct: 389 AVVWDV-KAEE 398
Score = 69 (29.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 27/101 (26%), Positives = 42/101 (41%)
Query: 284 REFQDSITKMHWK--APCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALI 340
RE I + W P + + + SAS + + +WD G ++ G +E +
Sbjct: 487 REHTKEIYTIRWSPTGPGTNNPNKQLTLASASF-DSTVKLWDAELGKMLCSFNGHREPVY 545
Query: 341 DLAWHPVHPIIVSVSLTGWVYIWA-------KDYTENWSAF 374
LA+ P I S SL ++IW+ K YT N F
Sbjct: 546 SLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIF 586
>TAIR|locus:2096489 [details] [associations]
symbol:AT3G42660 "AT3G42660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016458 "gene silencing" evidence=RCA] [GO:0016570 "histone
modification" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K11274 OMA:REYHFED InterPro:IPR022100
Pfam:PF12341 IPI:IPI00531156 RefSeq:NP_189852.2 UniGene:At.66552
ProteinModelPortal:F4JF14 SMR:F4JF14 PRIDE:F4JF14
EnsemblPlants:AT3G42660.1 GeneID:823286 KEGG:ath:AT3G42660
ArrayExpress:F4JF14 Uniprot:F4JF14
Length = 953
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 47/174 (27%), Positives = 84/174 (48%)
Query: 203 KSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSN-DRTIRIYDNL----LPLKNGLEALV 257
+S ++R V G+A +I++ ++ +T+S+ D +I ++D L LP L
Sbjct: 4 RSLKLREAHKVGGSAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSTSTLP-PTILRHHQ 62
Query: 258 DIEKGIAEPNGIEKMKMVGS--KCLALFR----EFQDSITK--MHWKAPCFSGDGEWVIA 309
D +A N + GS C+ L++ EFQ +IT+ + + F+G G + A
Sbjct: 63 DGVTSLALSND-STLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAA 121
Query: 310 GSASKGEHKIYIWDRAGYLVKILEGPKEALIDLAWHPVHPIIVSVSLTGWVYIW 363
+G I +D G +V++L+G K + L +HP ++ S+ TG V W
Sbjct: 122 AGDDEGIKLINTFD--GSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCW 173
>DICTYBASE|DDB_G0276031 [details] [associations]
symbol:DDB_G0276031 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276031
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000014 EMBL:X16524 PIR:S05357 RefSeq:XP_643326.1
ProteinModelPortal:P14197 STRING:P14197 EnsemblProtists:DDB0185151
GeneID:8620373 GenomeReviews:CM000151_GR KEGG:ddi:DDB_G0276031
KO:K12880 OMA:YAPEINE ProtClustDB:CLSZ2430924 Uniprot:P14197
Length = 478
Score = 73 (30.8 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 69 AITSVCWSKYGHRILVSAA-DKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCL 127
+I + WS + +L SA DK + +WDV G+ I + + R P +
Sbjct: 230 SIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVSTNSENIDVRWSPDGQ---FIV 286
Query: 128 ACPLSSAPMIVDLSTGST 145
AC ++DL T T
Sbjct: 287 ACTRDDHLALIDLPTIKT 304
Score = 62 (26.9 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRG 56
+A+N GT +A+ SDG +W+F+ G
Sbjct: 171 VAWNANGTKIASSGSDGIVRVWNFDPLG 198
Score = 62 (26.9 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 185 GDLVYVGNSKGEILV---IDHKSNQIRALVPVSG-AAVIKNIVFSRNGQYLLTNSNDRTI 240
GDL+ + NS G I + + ++ L + G A I + F G+YL S D +
Sbjct: 324 GDLILMANSMGNIEAYKFLPKSTTHVKHLKTLYGHTASIYCMEFDPTGKYLAAGSADSIV 383
Query: 241 RIYD 244
++D
Sbjct: 384 SLWD 387
Score = 46 (21.3 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 298 PC----FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPII 351
PC FS DG+++ +AS E I I+ + + +E + L WHP P++
Sbjct: 403 PCRSVSFSFDGQFI---AASSFESTIEIFHIESSQPIHTIEC--SGVSSLMWHPTLPLL 456
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 84 (34.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 28 CIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAA 87
C+ F+ G L+A+G D + +W +G + K A + SV +S G ++ ++
Sbjct: 67 CVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVF--KAHTATVRSVHFSSDGQSLVTASD 124
Query: 88 DKSLTLWDV 96
DK++ +W V
Sbjct: 125 DKTIKVWTV 133
Score = 78 (32.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTI 240
F+ G + + + V D + N++ V AAV ++ F +G YL+T SND T+
Sbjct: 196 FHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAV-NSLSFHPSGNYLITASNDSTL 254
Query: 241 RIYDNL 246
+I D L
Sbjct: 255 KILDLL 260
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 219 IKNIVFSRNGQYLLTNSNDRTIRIYD----NLLPLKNGLEALVDIEKGIAEPNGIEKMKM 274
++ I FS +G+YL+T + DR I+++D + + +G E DI NG +
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQ--DIYSLDFSHNGRFIVSG 420
Query: 275 VGSKCLALFR-EFQDSITKMHWK----APCFSGDGEWVIAGSASKGEHKIYIWDRAGYLV 329
G + L+ E I K+ + A S + +++ GS + I +W +G LV
Sbjct: 421 SGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSL---DQIIRVWSVSGTLV 477
Query: 330 KILEGPKEALIDLAWHPVHPIIVSVSLTGWVYIWAKDYTEN--WSAFAPD 377
+ LEG KE++ +A+ P I++S SL + +W T + SA P+
Sbjct: 478 ERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPE 527
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 79/317 (24%), Positives = 141/317 (44%)
Query: 69 AITSVCWSKYGHRILVSA-ADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCL 127
A++SV +S G R+L SA ADK++ + + I + + P+Q + +
Sbjct: 26 AVSSVKFSSDG-RLLASASADKTIRTYTI---NTINDPIAE--PVQEFTGHENGISDVAF 79
Query: 128 ACPLSSAPMIVDLSTGSTSILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAAC--FNKYG 185
+ S A IV S T + + DV G S K G T A C FN
Sbjct: 80 S---SDARFIVSASDDKT----LKLWDVETG----SLIKTLIG---HTNYAFCVNFNPQS 125
Query: 186 DLVYVGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYDN 245
+++ G+ + + D + + ++P V + F+R+G ++++S D RI+D+
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTA-VDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 246 LLPLKNGLEALVDIEKGIAE-----PNGIEKMKMVGS--KCLALFREFQDSITKM---HW 295
+ ++ L+D E PNG K +VG+ L L+ K H
Sbjct: 185 --GTGHCVKTLIDDENPPVSFVRFSPNG--KFILVGTLDNTLRLWNISSAKFLKTYTGHV 240
Query: 296 KAP-CFSG-----DGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVH 348
A C S +G+ +++GS ++ +++W+ + L++ LEG E ++++A HP
Sbjct: 241 NAQYCISSAFSVTNGKRIVSGSE---DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE 297
Query: 349 PIIVSVSLTGWVYIWAK 365
+I S SL V IW +
Sbjct: 298 NLIASGSLDKTVRIWTQ 314
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 84 (34.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 29 IAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAAD 88
+ + G +A+ +DG+ IWD ET L +A ++ + WS + + D
Sbjct: 186 VRISPNGRWIASASADGTARIWDAETGAHIDTLVGH--MAGVSCLAWSPDSGTLATGSDD 243
Query: 89 KSLTLWDVLKGE 100
K++ LWD + E
Sbjct: 244 KAIRLWDRITAE 255
Score = 83 (34.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 181 FNKYGDLVYVGNSKGEILVIDHKSNQ-IRALVPVSGAAVIKNIVFSRNGQYLLTNSNDRT 239
F + G LV ++ G I + D + Q +R LV AV N+ FS NG+Y+L + D
Sbjct: 356 FCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVT-NVCFSPNGRYILAFNLDSC 414
Query: 240 IRIYD 244
IR++D
Sbjct: 415 IRLWD 419
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 92 (37.4 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 22/89 (24%), Positives = 48/89 (53%)
Query: 11 GDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAI 70
GDF ++ + + ++ I+F++ G LLA+ +D + +WDF+ + + + +
Sbjct: 140 GDFERTLKGHTDS--VQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHD--HNV 195
Query: 71 TSVCWSKYGHRILVSAADKSLTLWDVLKG 99
+SV G I+ ++ DK++ +W+V G
Sbjct: 196 SSVAIMPNGDHIVSASRDKTMKMWEVATG 224
Score = 55 (24.4 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 294 HW-KAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPII 351
+W + F G +V++ + K + IWD + +K L + + L +H P +
Sbjct: 339 NWVRGVLFHPGGRFVVSCADDK---TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYV 395
Query: 352 VSVSLTGWVYIW 363
V+ S+ V +W
Sbjct: 396 VTGSVDQTVKVW 407
Score = 53 (23.7 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 213 VSGAAVIKNIVFSRNGQYLLTNSNDRTIRIYD 244
+S A +N + G +LL+ S D+TI+++D
Sbjct: 293 ISEATGSENKKSGKPGPFLLSGSRDKTIKMWD 324
>FB|FBgn0034908 [details] [associations]
symbol:CG5543 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GeneTree:ENSGT00390000015433 OMA:YWIAPAY EMBL:AY058624
EMBL:AY113366 RefSeq:NP_611832.1 UniGene:Dm.4144
ProteinModelPortal:Q9W1J3 SMR:Q9W1J3 PaxDb:Q9W1J3 PRIDE:Q9W1J3
EnsemblMetazoa:FBtr0072124 GeneID:37768 KEGG:dme:Dmel_CG5543
UCSC:CG5543-RA FlyBase:FBgn0034908 InParanoid:Q9W1J3
OrthoDB:EOG4F4QS5 PhylomeDB:Q9W1J3 GenomeRNAi:37768 NextBio:805315
Bgee:Q9W1J3 Uniprot:Q9W1J3
Length = 655
Score = 109 (43.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKE--LRDKECVAA-ITSVCWSKYGHRILVSAA 87
FNR TL+AAGC DGS WD + +RD + ITS+ +S G ++ +
Sbjct: 340 FNRDATLIAAGCVDGSIQTWDTRKMFVNTTHCVRDAHQKGSEITSIVFSYMGQQLATRSN 399
Query: 88 DKSLTLWDV 96
D+++ LWD+
Sbjct: 400 DETMKLWDL 408
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 27/119 (22%), Positives = 49/119 (41%)
Query: 174 FTPTAACFNKYGDLVYVGNS--KGE----ILVIDHKSNQIRALVPVSGAAVIKNIVFSRN 227
+ T CF+ L+ G S KG+ + KS + +PVS A V+K + +
Sbjct: 425 YDTTDCCFSPDDRLLVTGESLPKGQAEANLYFYSTKSYEEVQRIPVSNAHVVKTLWHPKL 484
Query: 228 GQYLLTNSNDRTIRIY-DNLLPLKNGLEALVDIEKGIAEPNGIEKMKMVGSKCLALFRE 285
Q ++ N TI+ Y D ++ +V + + +++ L LFR+
Sbjct: 485 NQLFVSCGNG-TIKCYYDEHRSIRGAKLCVVKTHRKRQPMEMVGVSQIITPHALPLFRQ 542
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 89 (36.4 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 23/84 (27%), Positives = 37/84 (44%)
Query: 14 PEVIEEYLEH-GVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITS 72
P I H ++ + N L+ AG GS +WD E I + L + A I S
Sbjct: 53 PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICS 110
Query: 73 VCWSKYGHRILVSAADKSLTLWDV 96
+ + YG + + D ++ LWD+
Sbjct: 111 LDFHPYGEFVASGSQDTNIKLWDI 134
Score = 63 (27.2 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 300 FSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKEALIDLAWHPVHPIIVSVS 355
FS DG+W +A +A +H + +WD AG ++ G + + +HP ++ S S
Sbjct: 155 FSPDGKW-LASAAD--DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 98 (39.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 23/91 (25%), Positives = 44/91 (48%)
Query: 31 FNRRGTLLAAGCSDGSCVIWD-FETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADK 89
F G LL +G +D + IWD + R + + +++ ++ +G + L ++ D+
Sbjct: 259 FPNSGHLLLSGSADSTVKIWDVYHQRELLRTYSGHS--KSLSDTTFNTHGDKFLSASFDR 316
Query: 90 SLTLWDVLKGEKITRIVLQQTPLQARLHPGS 120
+ LWD G+ I + +TP R +P S
Sbjct: 317 MMKLWDTETGKCIAKFTTGKTPHVVRFNPTS 347
Score = 66 (28.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 44/208 (21%), Positives = 78/208 (37%)
Query: 175 TPTAACFNKYGDLVY---VGNSKGEILVIDHKSNQIRALVPVSGAAVIKNIVFSRNGQYL 231
TP FN +L + G S +I+ D ++ + I F +G+
Sbjct: 337 TPHVVRFNPTSELGHEFVAGMSDNKIVQFDTRAGNETVQEYDHHLGPVNTITFCDDGRRF 396
Query: 232 LTNSNDRTIRI--YDNLLPLKNGLEA-LVDIEKGIAEPNGIEKMKMVGSKCLAL------ 282
+T S+DRT+R Y +P+K E L + + P+G + +
Sbjct: 397 MTTSDDRTLRAWEYGFGVPIKYIAEPYLFAMTRAATHPSGKYVAYQSSDNQIVVYSSNDK 456
Query: 283 FREFQDSITKMHWKAPC-----FSGDGEWVIAGSASKGEHKIYIWDRAGYLVKI-LEGPK 336
FR+ + + H A S DG+++ +G G + W KI +E +
Sbjct: 457 FRQNRKKSYRGHNNAGSAIDIDISADGQFLASGDTG-GYVAFWDWKSCKMFHKIQVEDGQ 515
Query: 337 EALIDLAWHPVHPIIVSVS-LTGWVYIW 363
+ + WHP V+ +G + W
Sbjct: 516 VSCVK--WHPQESSKVATGGASGIIKFW 541
>ZFIN|ZDB-GENE-030131-9512 [details] [associations]
symbol:coro1a "coronin, actin binding protein, 1A"
species:7955 "Danio rerio" [GO:0030027 "lamellipodium"
evidence=IBA] [GO:0051015 "actin filament binding" evidence=IBA]
[GO:0030864 "cortical actin cytoskeleton" evidence=IBA] [GO:0051126
"negative regulation of actin nucleation" evidence=IBA] [GO:0050918
"positive chemotaxis" evidence=IBA] [GO:0030595 "leukocyte
chemotaxis" evidence=IBA] [GO:0008360 "regulation of cell shape"
evidence=IBA] [GO:0001891 "phagocytic cup" evidence=IBA]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0032796 "uropod
organization" evidence=IBA] [GO:0001845 "phagolysosome assembly"
evidence=IBA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0001654 "eye development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-9512 GO:GO:0045335 GO:GO:0007420
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
eggNOG:COG2319 GO:GO:0051015 GO:GO:0030027 GO:GO:0021952
GO:GO:0001891 GO:GO:0030864 GO:GO:0050918 GO:GO:0001654
GO:GO:0030595 GO:GO:0051126 GO:GO:0001845 CTD:11151
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 KO:K13882 OMA:FMALICE OrthoDB:EOG4RNB8C
GO:GO:0032796 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:BX649554 EMBL:BC055237 EMBL:BC161664 EMBL:BC171389
EMBL:BC171393 EMBL:AY330221 IPI:IPI00770939 RefSeq:NP_957408.1
UniGene:Dr.9515 SMR:Q7SX58 STRING:Q7SX58 Ensembl:ENSDART00000076830
GeneID:100002113 KEGG:dre:100002113 InParanoid:Q7SX58
NextBio:20785305 Uniprot:Q7SX58
Length = 455
Score = 103 (41.3 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 37 LLAAGCSDGSCVIWDFETRGIAKELRDKECVAA-----ITSVCWSKYGHRILVSAA-DKS 90
++A+G D S +IW+ G+ LRD + V W H +L+SA D
Sbjct: 96 IIASGSEDCSVMIWEIPEGGLVTPLRDPVVKLEGHSKRVGLVSWHPTAHNVLMSAGCDNV 155
Query: 91 LTLWDVLKGEKITRIVLQQTPL 112
+ LW+V +GE + RI T L
Sbjct: 156 VILWNVARGEAVVRIDTVHTDL 177
Score = 54 (24.1 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 218 VIKNIVFSRNGQYLLTNSNDRTIRIYD 244
+I ++ ++RNG +LT D+ +R+ D
Sbjct: 177 LIYSVCWNRNGSQILTACKDKKLRVID 203
Score = 43 (20.2 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 300 FSGDGEWVIAGSASKGEHKIYIWD 323
F DG+ + G + E ++ +WD
Sbjct: 227 FVSDGKILTTGFSRMSERQVALWD 250
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 114 (45.2 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 57/261 (21%), Positives = 104/261 (39%)
Query: 26 MKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVS 85
++ + F+ G LA G D IWD E R I L+ E I S+ + G +++
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE--QDIYSLDYFPSGDKLVSG 503
Query: 86 AADKSLTLWDVLKGEKITRIVLQQTPLQARLHPGSSTPSLCLACPLSSAPMIVDLSTGST 145
+ D+++ +WD+ G+ + ++ + PG A L A + D TG
Sbjct: 504 SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG--KYIAAGSLDRAVRVWDSETGFL 561
Query: 146 SILPIAVPDVANGIAPSSRNKYSDGTPPFTPTAACFNKYGDLVYVGNSKGEILV--IDHK 203
+ D N S + D + F + G V G+ + + + +
Sbjct: 562 ----VERLDSEN----ESGTGHKDSV-----YSVVFTRDGQSVVSGSLDRSVKLWNLQNA 608
Query: 204 SNQIRALVPVSGAAVI-----KNIVFS----RNGQYLLTNSNDRTIRIYDN-----LLPL 249
+N+ + P SG + K+ V S +N +Y+L+ S DR + +D LL L
Sbjct: 609 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 668
Query: 250 KNGLEALVDIEKGIAEPNGIE 270
+ +++ + P G E
Sbjct: 669 QGHRNSVISVAVANGSPLGPE 689
Score = 52 (23.4 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 17 IEEYLEH-GVMKCIAFNRRGTLLAAGCS 43
+ + L+H V+ C+ F+ G LA GC+
Sbjct: 337 LHKSLDHTSVVCCVKFSNDGEYLATGCN 364
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 105 (42.0 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 27/81 (33%), Positives = 38/81 (46%)
Query: 31 FNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDKECVAAITSVCWSKYGHRILVSAADKS 90
+N GTLLA G DG IW E +A L + I ++ W+K G+ IL + DK+
Sbjct: 239 WNSDGTLLATGSYDGFARIWT-ENGNLASTLGQHK--GPIFALKWNKKGNYILSAGVDKT 295
Query: 91 LTLWDVLKGEKITRIVLQQTP 111
+WD GE + P
Sbjct: 296 TIIWDAHTGEAKQQFPFHSAP 316
Score = 58 (25.5 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 279 CLALFREFQDSITKMHWKAPCFSGDGEWVIAGSASKGEHKIYIWD-RAGYLVKILEGPKE 337
C R+ Q+ + + FS DG+++ +GS K H IW+ ++G LV +G
Sbjct: 440 CTHTLRKHQEPVYSV-----AFSPDGKYLASGSFDKCVH---IWNTQSGSLVHSYQGTG- 490
Query: 338 ALIDLAWH 345
+ ++ W+
Sbjct: 491 GIFEVCWN 498
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 551 524 0.00090 119 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 110
No. of states in DFA: 621 (66 KB)
Total size of DFA: 325 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.24u 0.13s 49.37t Elapsed: 00:00:03
Total cpu time: 49.28u 0.13s 49.41t Elapsed: 00:00:03
Start: Sat May 11 04:36:05 2013 End: Sat May 11 04:36:08 2013
WARNINGS ISSUED: 1