Query 008845
Match_columns 551
No_of_seqs 553 out of 4256
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 13:04:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008845hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 5E-30 1.7E-34 288.1 24.3 293 15-435 450-744 (780)
2 3f8u_A Protein disulfide-isome 100.0 2.8E-27 9.7E-32 251.1 32.9 359 20-469 21-462 (481)
3 2b5e_A Protein disulfide-isome 100.0 1.3E-28 4.4E-33 262.9 18.2 354 19-432 30-443 (504)
4 3apo_A DNAJ homolog subfamily 99.9 3.1E-26 1.1E-30 257.3 20.2 174 178-430 454-628 (780)
5 3uem_A Protein disulfide-isome 99.9 1.2E-21 4.1E-26 199.9 26.7 291 22-434 38-337 (361)
6 3idv_A Protein disulfide-isome 99.9 2.3E-22 7.9E-27 193.1 20.0 198 168-434 21-218 (241)
7 3idv_A Protein disulfide-isome 99.9 7.3E-22 2.5E-26 189.5 20.0 202 18-301 30-233 (241)
8 2lrn_A Thiol:disulfide interch 99.9 9.5E-22 3.2E-26 174.7 15.4 141 319-479 8-152 (152)
9 1i5g_A Tryparedoxin II; electr 99.9 1.3E-21 4.3E-26 172.2 15.1 133 319-452 6-143 (144)
10 3s9f_A Tryparedoxin; thioredox 99.9 1.2E-21 4E-26 176.8 13.6 131 321-453 29-164 (165)
11 3eur_A Uncharacterized protein 99.9 2.7E-21 9.4E-26 169.6 14.2 119 316-437 7-131 (142)
12 3ewl_A Uncharacterized conserv 99.9 3.6E-21 1.2E-25 168.8 14.8 115 318-435 5-125 (142)
13 1o8x_A Tryparedoxin, TRYX, TXN 99.9 3.8E-21 1.3E-25 169.6 14.9 133 318-452 6-143 (146)
14 2f9s_A Thiol-disulfide oxidore 99.8 9.6E-21 3.3E-25 167.9 14.3 136 320-472 6-142 (151)
15 1o73_A Tryparedoxin; electron 99.8 1.5E-20 5.2E-25 165.2 15.3 132 318-451 6-142 (144)
16 3drn_A Peroxiredoxin, bacterio 99.8 7.5E-21 2.6E-25 170.7 13.2 137 319-469 7-150 (161)
17 4fo5_A Thioredoxin-like protei 99.8 7.3E-21 2.5E-25 167.1 12.4 116 319-437 12-131 (143)
18 3fw2_A Thiol-disulfide oxidore 99.8 2E-20 6.9E-25 165.7 15.3 115 319-436 10-133 (150)
19 3gl3_A Putative thiol:disulfid 99.8 2.5E-20 8.5E-25 165.3 15.7 137 319-471 8-145 (152)
20 3kcm_A Thioredoxin family prot 99.8 1.5E-20 5.2E-25 167.1 12.8 144 318-476 6-151 (154)
21 3eyt_A Uncharacterized protein 99.8 2.5E-20 8.5E-25 166.5 13.8 135 319-470 5-154 (158)
22 3lor_A Thiol-disulfide isomera 99.8 1.7E-20 5.8E-25 168.0 12.6 136 317-469 6-156 (160)
23 2lrt_A Uncharacterized protein 99.8 3.5E-20 1.2E-24 164.6 14.6 114 318-436 13-130 (152)
24 3raz_A Thioredoxin-related pro 99.8 2.9E-20 1E-24 164.8 13.7 135 320-472 5-144 (151)
25 3hcz_A Possible thiol-disulfid 99.8 1.9E-20 6.4E-25 165.1 12.1 134 318-467 9-145 (148)
26 2lja_A Putative thiol-disulfid 99.8 7.1E-20 2.4E-24 162.4 14.7 138 319-472 8-147 (152)
27 3u5r_E Uncharacterized protein 99.8 2.5E-20 8.7E-25 175.9 12.5 145 319-471 37-190 (218)
28 3fkf_A Thiol-disulfide oxidore 99.8 5.6E-20 1.9E-24 162.0 13.3 130 319-468 10-146 (148)
29 4g2e_A Peroxiredoxin; redox pr 99.8 5.4E-21 1.9E-25 170.8 6.7 135 319-466 9-156 (157)
30 3or5_A Thiol:disulfide interch 99.8 1E-19 3.5E-24 163.7 14.7 140 319-476 13-159 (165)
31 3gkn_A Bacterioferritin comigr 99.8 7E-20 2.4E-24 164.6 12.9 134 319-467 12-161 (163)
32 1a8l_A Protein disulfide oxido 99.8 1.7E-18 5.7E-23 164.4 21.7 184 178-435 21-207 (226)
33 1jfu_A Thiol:disulfide interch 99.8 1.1E-19 3.6E-24 167.2 12.8 137 319-469 39-181 (186)
34 2l5o_A Putative thioredoxin; s 99.8 1.7E-19 5.7E-24 160.1 13.5 140 317-473 5-146 (153)
35 3s9f_A Tryparedoxin; thioredox 99.8 2.4E-19 8.3E-24 161.5 14.3 124 8-132 37-163 (165)
36 4evm_A Thioredoxin family prot 99.8 3.2E-19 1.1E-23 154.6 13.9 115 320-437 2-122 (138)
37 3lwa_A Secreted thiol-disulfid 99.8 4.9E-19 1.7E-23 162.3 15.3 117 318-437 35-164 (183)
38 2ggt_A SCO1 protein homolog, m 99.8 5E-19 1.7E-23 159.0 14.8 135 320-469 3-162 (164)
39 2cvb_A Probable thiol-disulfid 99.8 3.7E-19 1.3E-23 163.9 14.0 142 319-471 12-162 (188)
40 3ha9_A Uncharacterized thiored 99.8 2.5E-19 8.5E-24 161.3 12.5 110 320-434 17-145 (165)
41 1lu4_A Soluble secreted antige 99.8 2.6E-19 8.9E-24 155.3 12.0 111 319-435 3-114 (136)
42 4gqc_A Thiol peroxidase, perox 99.8 1.3E-20 4.4E-25 169.5 3.8 138 319-469 10-161 (164)
43 1zzo_A RV1677; thioredoxin fol 99.8 4.1E-19 1.4E-23 153.9 13.0 110 320-433 5-115 (136)
44 1i5g_A Tryparedoxin II; electr 99.8 9.3E-19 3.2E-23 153.7 14.6 124 8-131 16-142 (144)
45 3ixr_A Bacterioferritin comigr 99.8 4.4E-19 1.5E-23 162.0 12.2 133 320-467 31-177 (179)
46 3kh7_A Thiol:disulfide interch 99.8 1E-18 3.6E-23 159.1 14.4 113 318-436 34-149 (176)
47 2rli_A SCO2 protein homolog, m 99.8 1.5E-18 5.1E-23 157.1 15.4 134 321-469 7-165 (171)
48 3ia1_A THIO-disulfide isomeras 99.8 1E-18 3.6E-23 155.2 13.7 132 319-471 10-147 (154)
49 1sji_A Calsequestrin 2, calseq 99.8 2.1E-17 7E-22 167.7 25.1 271 19-428 27-315 (350)
50 2lus_A Thioredoxion; CR-Trp16, 99.7 8.5E-21 2.9E-25 166.5 0.0 120 321-440 5-129 (143)
51 3dwv_A Glutathione peroxidase- 99.8 2.1E-19 7.2E-24 165.4 9.1 135 319-469 25-184 (187)
52 2b5x_A YKUV protein, TRXY; thi 99.8 1.2E-18 4.1E-23 153.4 13.2 132 320-469 7-146 (148)
53 2ls5_A Uncharacterized protein 99.7 1.1E-20 3.9E-25 169.0 0.0 114 320-436 13-131 (159)
54 3erw_A Sporulation thiol-disul 99.8 1.2E-18 4E-23 152.8 12.7 115 318-436 13-131 (145)
55 1xzo_A BSSCO, hypothetical pro 99.8 1.3E-18 4.4E-23 157.9 13.4 136 320-468 13-172 (174)
56 1xvw_A Hypothetical protein RV 99.8 4.8E-19 1.6E-23 158.6 10.3 134 319-466 14-158 (160)
57 2c0d_A Thioredoxin peroxidase 99.8 8.7E-19 3E-23 165.2 12.1 136 319-467 30-183 (221)
58 1o8x_A Tryparedoxin, TRYX, TXN 99.8 2.9E-18 9.9E-23 151.0 14.5 124 8-132 17-143 (146)
59 2hls_A Protein disulfide oxido 99.8 1.1E-17 3.9E-22 160.2 19.3 180 180-435 26-209 (243)
60 2ywi_A Hypothetical conserved 99.8 1.2E-18 4E-23 161.6 11.9 142 320-471 24-177 (196)
61 2h01_A 2-Cys peroxiredoxin; th 99.8 1.6E-18 5.6E-23 160.2 12.8 136 319-467 5-158 (192)
62 1n8j_A AHPC, alkyl hydroperoxi 99.8 1E-18 3.6E-23 160.5 11.1 136 319-467 6-155 (186)
63 1o73_A Tryparedoxin; electron 99.8 4.5E-18 1.5E-22 149.3 14.7 123 8-131 17-142 (144)
64 2i81_A 2-Cys peroxiredoxin; st 99.8 1.5E-18 5.1E-23 162.9 12.3 136 319-467 26-179 (213)
65 3us3_A Calsequestrin-1; calciu 99.8 9E-17 3.1E-21 163.8 26.3 279 20-431 30-320 (367)
66 2jsy_A Probable thiol peroxida 99.8 5.5E-19 1.9E-23 159.5 8.8 135 319-467 23-166 (167)
67 3eur_A Uncharacterized protein 99.8 2.4E-18 8.1E-23 150.8 12.6 107 8-115 19-129 (142)
68 1a8l_A Protein disulfide oxido 99.8 6.9E-18 2.3E-22 160.2 16.8 183 16-272 18-204 (226)
69 2h30_A Thioredoxin, peptide me 99.8 1.5E-18 5E-23 155.9 11.5 109 326-436 25-138 (164)
70 1psq_A Probable thiol peroxida 99.8 1.1E-18 3.7E-23 156.9 10.6 133 319-465 21-162 (163)
71 2f8a_A Glutathione peroxidase 99.8 4.2E-18 1.4E-22 159.2 14.8 116 319-437 25-190 (208)
72 3cmi_A Peroxiredoxin HYR1; thi 99.8 8.3E-19 2.8E-23 159.0 9.6 114 319-436 11-150 (171)
73 3hdc_A Thioredoxin family prot 99.8 1.2E-18 4.1E-23 155.6 10.5 113 319-437 20-133 (158)
74 2ywm_A Glutaredoxin-like prote 99.8 1.3E-17 4.4E-22 158.7 17.3 175 178-432 20-199 (229)
75 1we0_A Alkyl hydroperoxide red 99.8 4.2E-18 1.4E-22 156.7 13.4 117 319-438 6-137 (187)
76 2p5q_A Glutathione peroxidase 99.8 2.9E-18 9.8E-23 155.0 12.1 116 319-437 11-151 (170)
77 2pn8_A Peroxiredoxin-4; thiore 99.8 2.1E-18 7.1E-23 161.7 11.4 136 319-467 24-176 (211)
78 2bmx_A Alkyl hydroperoxidase C 99.8 2.4E-18 8.3E-23 159.4 11.7 137 319-468 9-170 (195)
79 2v1m_A Glutathione peroxidase; 99.8 2.5E-18 8.5E-23 155.2 11.4 116 319-437 10-150 (169)
80 1uul_A Tryparedoxin peroxidase 99.8 3.1E-18 1.1E-22 159.6 12.3 136 319-467 11-164 (202)
81 1zof_A Alkyl hydroperoxide-red 99.8 3E-18 1E-22 159.3 12.1 136 319-467 6-160 (198)
82 2vup_A Glutathione peroxidase- 99.8 2.3E-18 7.8E-23 158.9 11.2 134 319-469 27-186 (190)
83 2p31_A CL683, glutathione pero 99.8 1.2E-18 4E-23 159.5 9.0 115 319-436 28-163 (181)
84 2i3y_A Epididymal secretory gl 99.8 1.1E-17 3.8E-22 156.5 15.7 133 319-469 34-212 (215)
85 3me7_A Putative uncharacterize 99.8 5.8E-18 2E-22 153.2 13.0 140 319-471 6-165 (170)
86 3ztl_A Thioredoxin peroxidase; 99.8 3.7E-18 1.3E-22 161.4 12.1 116 319-437 45-177 (222)
87 2b7k_A SCO1 protein; metalloch 99.8 7.5E-18 2.6E-22 156.7 13.9 117 321-437 22-162 (200)
88 3p7x_A Probable thiol peroxida 99.7 1.8E-18 6.2E-23 155.9 9.1 132 319-465 25-165 (166)
89 4hde_A SCO1/SENC family lipopr 99.7 8.5E-18 2.9E-22 152.0 13.5 139 317-467 9-169 (170)
90 2a4v_A Peroxiredoxin DOT5; yea 99.7 2.6E-18 8.9E-23 153.7 10.0 113 319-437 12-134 (159)
91 2hyx_A Protein DIPZ; thioredox 99.7 4.7E-18 1.6E-22 170.6 12.8 114 320-436 57-181 (352)
92 1qmv_A Human thioredoxin perox 99.7 5.5E-18 1.9E-22 157.3 12.0 136 319-467 10-162 (197)
93 2ywm_A Glutaredoxin-like prote 99.7 2.8E-17 9.7E-22 156.3 17.2 175 17-271 18-198 (229)
94 2yzh_A Probable thiol peroxida 99.7 3.1E-18 1E-22 155.2 9.8 132 320-466 27-170 (171)
95 3kij_A Probable glutathione pe 99.7 6E-18 2.1E-22 154.6 11.8 117 318-437 16-153 (180)
96 1zye_A Thioredoxin-dependent p 99.7 8.4E-18 2.9E-22 158.7 12.6 137 319-468 32-185 (220)
97 3ewl_A Uncharacterized conserv 99.7 1.8E-17 6E-22 145.1 13.6 106 8-114 15-124 (142)
98 2obi_A PHGPX, GPX-4, phospholi 99.7 6.8E-18 2.3E-22 154.7 11.4 115 319-436 26-166 (183)
99 4fo5_A Thioredoxin-like protei 99.7 5.7E-18 2E-22 148.5 10.2 107 8-115 20-129 (143)
100 2gs3_A PHGPX, GPX-4, phospholi 99.7 6.5E-18 2.2E-22 155.2 10.9 115 319-436 28-168 (185)
101 1tp9_A Peroxiredoxin, PRX D (t 99.7 6E-18 2E-22 151.8 10.4 115 319-437 9-144 (162)
102 1q98_A Thiol peroxidase, TPX; 99.7 2.6E-18 8.9E-23 154.7 8.0 114 319-437 22-147 (165)
103 3qpm_A Peroxiredoxin; oxidored 99.7 9.3E-18 3.2E-22 160.2 11.9 117 318-437 52-185 (240)
104 3raz_A Thioredoxin-related pro 99.7 4.4E-17 1.5E-21 144.2 14.9 106 8-115 12-121 (151)
105 2r37_A Glutathione peroxidase 99.7 4E-17 1.4E-21 152.1 15.2 114 319-436 16-175 (207)
106 1kng_A Thiol:disulfide interch 99.7 1.5E-17 5.2E-22 147.9 11.5 112 319-436 13-134 (156)
107 2wfc_A Peroxiredoxin 5, PRDX5; 99.7 1.9E-17 6.5E-22 149.1 12.1 115 319-437 8-140 (167)
108 2k6v_A Putative cytochrome C o 99.7 8.2E-18 2.8E-22 152.3 9.7 115 320-437 16-154 (172)
109 3zrd_A Thiol peroxidase; oxido 99.7 6.2E-18 2.1E-22 157.1 9.1 115 319-438 57-183 (200)
110 3eyt_A Uncharacterized protein 99.7 1.7E-17 5.8E-22 148.0 11.6 108 7-115 15-133 (158)
111 2b1k_A Thiol:disulfide interch 99.7 1.6E-17 5.3E-22 149.9 10.3 113 318-437 26-143 (168)
112 1xvq_A Thiol peroxidase; thior 99.7 7.4E-18 2.5E-22 153.3 7.0 113 319-437 23-146 (175)
113 3uma_A Hypothetical peroxiredo 99.7 1.4E-17 4.7E-22 152.1 8.8 134 318-462 30-183 (184)
114 2lrn_A Thiol:disulfide interch 99.7 7E-17 2.4E-21 143.1 13.1 107 8-115 17-125 (152)
115 2r2j_A Thioredoxin domain-cont 99.7 4.6E-15 1.6E-19 152.1 28.3 269 19-428 21-302 (382)
116 3fkf_A Thiol-disulfide oxidore 99.7 5.1E-17 1.7E-21 142.9 11.8 107 8-115 19-130 (148)
117 3mng_A Peroxiredoxin-5, mitoch 99.7 4.7E-17 1.6E-21 147.0 11.6 117 318-438 19-155 (173)
118 3fw2_A Thiol-disulfide oxidore 99.7 9.6E-17 3.3E-21 141.9 13.3 107 8-115 19-132 (150)
119 3lor_A Thiol-disulfide isomera 99.7 4E-17 1.4E-21 145.8 10.8 108 7-115 17-136 (160)
120 3tjj_A Peroxiredoxin-4; thiore 99.7 3E-17 1E-21 157.7 10.3 117 318-437 66-199 (254)
121 2v2g_A Peroxiredoxin 6; oxidor 99.7 3.9E-17 1.3E-21 154.7 10.9 136 318-467 7-164 (233)
122 1nm3_A Protein HI0572; hybrid, 99.7 3.2E-17 1.1E-21 157.2 10.4 137 319-464 8-163 (241)
123 2pwj_A Mitochondrial peroxired 99.7 2.5E-17 8.5E-22 149.0 9.1 116 319-438 12-153 (171)
124 1v5n_A PDI-like hypothetical p 99.7 1.2E-17 4E-22 131.3 5.3 80 445-524 1-81 (89)
125 3gl3_A Putative thiol:disulfid 99.7 4.3E-16 1.5E-20 137.8 15.1 104 9-115 17-121 (152)
126 2lrt_A Uncharacterized protein 99.7 1.8E-16 6E-21 140.6 12.5 105 8-115 23-129 (152)
127 3hcz_A Possible thiol-disulfid 99.7 4.8E-17 1.6E-21 143.1 8.4 107 8-115 19-127 (148)
128 2f9s_A Thiol-disulfide oxidore 99.7 1.8E-16 6.3E-21 140.1 11.9 105 8-115 14-119 (151)
129 1nm3_A Protein HI0572; hybrid, 99.7 4E-16 1.4E-20 149.5 15.2 103 8-115 18-139 (241)
130 1prx_A HORF6; peroxiredoxin, h 99.7 1.2E-16 4.1E-21 150.8 11.2 136 318-467 9-168 (224)
131 3keb_A Probable thiol peroxida 99.7 9.9E-17 3.4E-21 149.4 9.6 132 319-467 27-175 (224)
132 2lja_A Putative thiol-disulfid 99.7 4.4E-16 1.5E-20 137.7 13.0 106 8-115 18-124 (152)
133 3uem_A Protein disulfide-isome 99.7 5.5E-16 1.9E-20 157.9 14.9 189 22-269 138-331 (361)
134 3or5_A Thiol:disulfide interch 99.7 6.2E-16 2.1E-20 138.7 13.4 104 8-115 22-132 (165)
135 3drn_A Peroxiredoxin, bacterio 99.7 1.5E-15 5E-20 136.0 15.8 104 8-115 16-126 (161)
136 1xcc_A 1-Cys peroxiredoxin; un 99.7 1.7E-16 5.9E-21 149.3 10.0 136 318-467 7-165 (220)
137 3sbc_A Peroxiredoxin TSA1; alp 99.7 3.9E-16 1.3E-20 144.2 11.4 140 315-467 24-180 (216)
138 3lwa_A Secreted thiol-disulfid 99.7 4.8E-16 1.6E-20 142.3 12.0 104 9-115 48-162 (183)
139 1lu4_A Soluble secreted antige 99.7 1.2E-15 4.1E-20 132.0 13.7 101 8-113 12-113 (136)
140 3erw_A Sporulation thiol-disul 99.6 9E-16 3.1E-20 134.3 12.4 104 8-115 23-130 (145)
141 3u5r_E Uncharacterized protein 99.6 6.9E-16 2.4E-20 145.4 12.4 106 8-116 46-160 (218)
142 3a2v_A Probable peroxiredoxin; 99.6 2.7E-16 9.2E-21 149.9 9.4 136 318-467 9-161 (249)
143 2b5x_A YKUV protein, TRXY; thi 99.6 8.9E-16 3.1E-20 134.8 11.8 104 8-115 17-126 (148)
144 3ha9_A Uncharacterized thiored 99.6 7.6E-16 2.6E-20 138.3 11.6 101 8-114 25-145 (165)
145 3kh7_A Thiol:disulfide interch 99.6 9.1E-16 3.1E-20 139.5 12.1 98 11-115 49-148 (176)
146 1zzo_A RV1677; thioredoxin fol 99.6 1.2E-15 4.2E-20 131.8 12.4 101 8-113 13-115 (136)
147 2hls_A Protein disulfide oxido 99.6 1.3E-14 4.4E-19 138.9 20.4 179 16-273 22-207 (243)
148 3kcm_A Thioredoxin family prot 99.6 1.5E-15 5E-20 134.6 12.8 105 8-115 16-122 (154)
149 3q6o_A Sulfhydryl oxidase 1; p 99.6 2.2E-15 7.5E-20 144.6 14.5 68 19-108 29-98 (244)
150 3gkn_A Bacterioferritin comigr 99.6 2.2E-15 7.5E-20 135.1 13.3 104 8-115 23-140 (163)
151 2f8a_A Glutathione peroxidase 99.6 3.4E-15 1.2E-19 139.3 14.7 105 10-115 37-188 (208)
152 2h30_A Thioredoxin, peptide me 99.6 7.6E-16 2.6E-20 138.0 9.8 105 8-115 26-137 (164)
153 2rli_A SCO2 protein homolog, m 99.6 3.7E-15 1.3E-19 134.6 14.3 108 8-115 14-145 (171)
154 3zzx_A Thioredoxin; oxidoreduc 99.6 1.1E-15 3.7E-20 126.1 9.5 72 337-436 18-89 (105)
155 4evm_A Thioredoxin family prot 99.6 4.3E-15 1.5E-19 128.4 13.7 104 8-115 10-120 (138)
156 3cmi_A Peroxiredoxin HYR1; thi 99.6 7.3E-16 2.5E-20 139.5 8.5 106 8-115 20-149 (171)
157 3tue_A Tryparedoxin peroxidase 99.6 2E-15 6.7E-20 139.9 11.2 139 316-467 28-184 (219)
158 3kij_A Probable glutathione pe 99.6 2.4E-15 8.1E-20 137.3 11.6 106 8-115 26-151 (180)
159 2ggt_A SCO1 protein homolog, m 99.6 3.6E-15 1.2E-19 133.6 12.5 108 8-115 11-142 (164)
160 4eo3_A Bacterioferritin comigr 99.6 3.6E-15 1.2E-19 148.2 13.6 131 319-468 3-139 (322)
161 2lus_A Thioredoxion; CR-Trp16, 99.4 5.2E-17 1.8E-21 142.1 0.0 114 8-121 12-130 (143)
162 3ia1_A THIO-disulfide isomeras 99.6 7.6E-15 2.6E-19 130.0 14.0 103 8-115 19-125 (154)
163 1jfu_A Thiol:disulfide interch 99.6 4.1E-15 1.4E-19 136.4 12.5 105 8-115 48-159 (186)
164 2cvb_A Probable thiol-disulfid 99.6 2.8E-15 9.7E-20 137.7 11.5 104 8-115 21-132 (188)
165 4g2e_A Peroxiredoxin; redox pr 99.6 1E-15 3.5E-20 136.4 8.2 104 8-115 18-134 (157)
166 2l5o_A Putative thioredoxin; s 99.6 3.4E-15 1.2E-19 132.1 11.3 105 8-115 16-122 (153)
167 2hyx_A Protein DIPZ; thioredox 99.6 3.8E-15 1.3E-19 149.4 11.9 105 8-115 70-180 (352)
168 3hxs_A Thioredoxin, TRXP; elec 99.6 3.9E-15 1.3E-19 130.0 10.5 83 326-434 38-120 (141)
169 2v1m_A Glutathione peroxidase; 99.6 4.9E-15 1.7E-19 133.4 11.4 107 8-115 19-148 (169)
170 2ywi_A Hypothetical conserved 99.6 3.4E-15 1.2E-19 138.1 10.6 105 8-115 33-146 (196)
171 3dwv_A Glutathione peroxidase- 99.6 5.3E-16 1.8E-20 142.6 5.0 107 8-115 34-164 (187)
172 3hdc_A Thioredoxin family prot 99.6 3E-15 1E-19 133.5 9.7 102 8-115 29-131 (158)
173 3t58_A Sulfhydryl oxidase 1; o 99.6 5.6E-15 1.9E-19 156.0 13.1 72 20-113 30-106 (519)
174 2bmx_A Alkyl hydroperoxidase C 99.6 8.8E-15 3E-19 135.3 12.7 101 11-115 36-147 (195)
175 1kng_A Thiol:disulfide interch 99.6 4.1E-15 1.4E-19 132.0 9.8 100 10-115 32-133 (156)
176 3ixr_A Bacterioferritin comigr 99.6 1.4E-14 4.9E-19 131.9 13.6 104 8-115 39-156 (179)
177 1xvw_A Hypothetical protein RV 99.6 8.8E-15 3E-19 130.6 11.9 106 8-115 23-137 (160)
178 2p5q_A Glutathione peroxidase 99.6 1.3E-14 4.4E-19 130.8 12.9 107 8-115 20-149 (170)
179 2l57_A Uncharacterized protein 99.6 6.1E-15 2.1E-19 126.1 10.1 106 328-471 15-120 (126)
180 2vup_A Glutathione peroxidase- 99.6 3.1E-15 1.1E-19 137.8 8.8 107 8-115 36-166 (190)
181 2c0d_A Thioredoxin peroxidase 99.6 8.9E-15 3E-19 137.7 12.1 103 9-115 42-161 (221)
182 2b1k_A Thiol:disulfide interch 99.6 8.5E-15 2.9E-19 131.9 11.4 100 9-115 39-141 (168)
183 1n8j_A AHPC, alkyl hydroperoxi 99.6 9.1E-15 3.1E-19 134.1 11.6 103 9-115 17-133 (186)
184 2pn8_A Peroxiredoxin-4; thiore 99.6 1E-14 3.5E-19 136.5 12.1 103 9-115 37-154 (211)
185 2gs3_A PHGPX, GPX-4, phospholi 99.6 7.4E-15 2.5E-19 134.6 10.7 107 8-115 37-167 (185)
186 3zzx_A Thioredoxin; oxidoreduc 99.6 1.5E-14 5E-19 119.3 11.3 73 15-115 15-88 (105)
187 3ztl_A Thioredoxin peroxidase; 99.6 2E-14 6.8E-19 135.7 13.7 103 9-115 58-175 (222)
188 1uul_A Tryparedoxin peroxidase 99.6 1.8E-14 6.1E-19 134.0 13.1 103 9-115 23-142 (202)
189 1we0_A Alkyl hydroperoxide red 99.6 1.3E-14 4.4E-19 133.3 11.9 100 12-115 23-134 (187)
190 1zof_A Alkyl hydroperoxide-red 99.6 1.4E-14 4.7E-19 134.4 11.7 103 9-115 18-138 (198)
191 1qmv_A Human thioredoxin perox 99.6 2.1E-14 7.1E-19 133.0 12.8 103 9-115 21-140 (197)
192 2r37_A Glutathione peroxidase 99.6 4.4E-14 1.5E-18 131.5 15.0 106 8-115 25-174 (207)
193 2i81_A 2-Cys peroxiredoxin; st 99.6 1.8E-14 6E-19 135.1 12.4 103 9-115 38-157 (213)
194 2p31_A CL683, glutathione pero 99.6 2.6E-15 8.9E-20 137.2 6.5 106 8-115 37-162 (181)
195 2i3y_A Epididymal secretory gl 99.5 2.3E-14 7.9E-19 133.9 12.3 106 8-115 43-192 (215)
196 1xzo_A BSSCO, hypothetical pro 99.5 2E-14 6.8E-19 130.1 11.5 108 8-115 21-151 (174)
197 2ju5_A Thioredoxin disulfide i 99.5 5.3E-15 1.8E-19 131.3 7.4 113 328-468 36-152 (154)
198 2h01_A 2-Cys peroxiredoxin; th 99.5 2E-14 6.7E-19 132.6 11.3 103 9-115 17-136 (192)
199 2b7k_A SCO1 protein; metalloch 99.5 5.1E-14 1.7E-18 130.7 14.1 108 8-115 29-160 (200)
200 2obi_A PHGPX, GPX-4, phospholi 99.5 3.2E-14 1.1E-18 130.1 12.4 107 8-115 35-165 (183)
201 3me7_A Putative uncharacterize 99.5 6.9E-14 2.4E-18 126.2 14.4 108 8-115 16-142 (170)
202 1zye_A Thioredoxin-dependent p 99.5 2.7E-14 9.2E-19 134.6 11.9 103 9-115 45-162 (220)
203 3fk8_A Disulphide isomerase; A 99.5 3.3E-14 1.1E-18 122.7 11.4 78 338-438 28-110 (133)
204 3ul3_B Thioredoxin, thioredoxi 99.5 4.1E-14 1.4E-18 121.3 11.8 84 326-436 29-112 (128)
205 2ls5_A Uncharacterized protein 99.3 5.8E-16 2E-20 138.2 0.0 106 8-115 21-130 (159)
206 3qpm_A Peroxiredoxin; oxidored 99.5 5.7E-14 2E-18 133.9 13.6 102 10-115 67-183 (240)
207 2av4_A Thioredoxin-like protei 99.5 4.8E-14 1.6E-18 121.9 11.1 69 339-434 41-109 (160)
208 2fwh_A Thiol:disulfide interch 99.5 8.9E-15 3.1E-19 126.6 6.5 92 319-433 9-105 (134)
209 1psq_A Probable thiol peroxida 99.5 3.6E-14 1.2E-18 127.2 10.5 102 8-115 30-141 (163)
210 2av4_A Thioredoxin-like protei 99.5 1.7E-14 5.9E-19 124.7 7.4 84 4-114 23-109 (160)
211 2k6v_A Putative cytochrome C o 99.5 2.8E-14 9.7E-19 128.8 9.0 106 8-115 24-152 (172)
212 1tp9_A Peroxiredoxin, PRX D (t 99.5 4.1E-14 1.4E-18 126.6 9.9 103 8-115 20-142 (162)
213 2l5l_A Thioredoxin; structural 99.5 1E-13 3.5E-18 120.1 11.7 92 339-471 38-129 (136)
214 2wfc_A Peroxiredoxin 5, PRDX5; 99.5 4.5E-14 1.5E-18 126.9 9.5 103 8-115 18-138 (167)
215 3f3q_A Thioredoxin-1; His TAG, 99.5 4.1E-14 1.4E-18 117.6 8.4 70 338-435 23-92 (109)
216 4gqc_A Thiol peroxidase, perox 99.5 8.3E-15 2.8E-19 131.4 4.3 104 8-115 19-136 (164)
217 1q98_A Thiol peroxidase, TPX; 99.5 2.9E-14 1E-18 128.0 7.9 103 8-115 31-145 (165)
218 3qfa_C Thioredoxin; protein-pr 99.5 3.4E-14 1.2E-18 119.5 7.4 70 338-435 30-99 (116)
219 3mng_A Peroxiredoxin-5, mitoch 99.5 1.2E-13 4E-18 124.7 11.3 103 8-115 30-152 (173)
220 3p7x_A Probable thiol peroxida 99.5 5.9E-14 2E-18 126.2 9.2 101 8-115 34-144 (166)
221 3hxs_A Thioredoxin, TRXP; elec 99.5 9.7E-14 3.3E-18 121.0 10.3 80 9-114 40-120 (141)
222 3tjj_A Peroxiredoxin-4; thiore 99.5 1E-13 3.5E-18 133.0 11.1 103 9-115 80-197 (254)
223 2yzh_A Probable thiol peroxida 99.5 1.1E-13 3.7E-18 125.1 10.4 101 8-115 35-148 (171)
224 4euy_A Uncharacterized protein 99.5 1.1E-13 3.6E-18 114.2 9.3 84 4-115 2-86 (105)
225 3uma_A Hypothetical peroxiredo 99.5 7.9E-14 2.7E-18 127.2 9.3 102 9-115 43-163 (184)
226 4hde_A SCO1/SENC family lipopr 99.5 2E-13 6.8E-18 123.1 11.4 108 8-115 20-149 (170)
227 3tco_A Thioredoxin (TRXA-1); d 99.5 1.4E-13 4.7E-18 114.0 9.5 72 338-436 20-91 (109)
228 2kuc_A Putative disulphide-iso 99.5 6.8E-14 2.3E-18 120.1 7.9 100 332-469 20-122 (130)
229 2qgv_A Hydrogenase-1 operon pr 99.5 2.3E-14 7.9E-19 122.5 4.7 73 339-437 34-108 (140)
230 3zrd_A Thiol peroxidase; oxido 99.5 6.2E-14 2.1E-18 130.0 8.0 103 8-115 66-180 (200)
231 2qsi_A Putative hydrogenase ex 99.5 8.5E-14 2.9E-18 118.6 8.1 72 339-437 33-106 (137)
232 3ul3_B Thioredoxin, thioredoxi 99.5 2.5E-13 8.5E-18 116.4 11.1 80 9-115 31-111 (128)
233 2voc_A Thioredoxin; electron t 99.5 1.8E-13 6.3E-18 114.2 10.0 72 338-436 16-87 (112)
234 3p2a_A Thioredoxin 2, putative 99.5 2.4E-13 8.2E-18 119.6 11.2 105 326-471 42-146 (148)
235 3d22_A TRXH4, thioredoxin H-ty 99.5 5.3E-14 1.8E-18 122.4 6.8 93 338-473 45-137 (139)
236 2jsy_A Probable thiol peroxida 99.5 3.9E-14 1.3E-18 127.4 6.0 102 8-115 32-143 (167)
237 3ph9_A Anterior gradient prote 99.5 4.6E-14 1.6E-18 123.9 6.2 104 338-471 43-148 (151)
238 1xvq_A Thiol peroxidase; thior 99.5 1.1E-13 3.9E-18 125.5 9.0 101 8-115 32-144 (175)
239 2trx_A Thioredoxin; electron t 99.5 4E-13 1.4E-17 111.1 11.0 71 338-435 19-89 (108)
240 4f82_A Thioredoxin reductase; 99.4 1.7E-13 5.7E-18 122.7 9.2 104 330-437 37-156 (176)
241 2pu9_C TRX-F, thioredoxin F-ty 99.4 2E-13 6.9E-18 113.7 9.2 74 335-435 20-93 (111)
242 2l57_A Uncharacterized protein 99.4 5.3E-13 1.8E-17 113.9 11.7 77 15-115 21-98 (126)
243 3f9u_A Putative exported cytoc 99.4 6E-14 2.1E-18 126.9 6.1 102 333-437 41-148 (172)
244 3d6i_A Monothiol glutaredoxin- 99.4 2.1E-13 7.2E-18 113.7 8.9 72 338-435 20-91 (112)
245 1xfl_A Thioredoxin H1; AT3G510 99.4 2.7E-13 9.1E-18 115.5 9.6 70 338-435 37-106 (124)
246 1z6n_A Hypothetical protein PA 99.4 7.8E-14 2.7E-18 124.8 6.6 77 334-437 49-128 (167)
247 1nsw_A Thioredoxin, TRX; therm 99.4 1.9E-13 6.5E-18 112.4 8.4 71 338-435 16-86 (105)
248 1sen_A Thioredoxin-like protei 99.4 9.3E-15 3.2E-19 131.1 0.3 108 335-471 42-151 (164)
249 1t00_A Thioredoxin, TRX; redox 99.4 4.6E-13 1.6E-17 111.6 10.5 71 338-435 22-92 (112)
250 1gh2_A Thioredoxin-like protei 99.4 3.1E-13 1.1E-17 111.7 9.4 70 338-435 20-89 (107)
251 2dj1_A Protein disulfide-isome 99.4 5.9E-13 2E-17 115.8 11.5 105 326-469 21-125 (140)
252 4euy_A Uncharacterized protein 99.4 2.3E-13 7.7E-18 112.2 8.3 71 338-436 17-87 (105)
253 1dby_A Chloroplast thioredoxin 99.4 5.9E-13 2E-17 109.9 10.8 71 339-436 19-89 (107)
254 3die_A Thioredoxin, TRX; elect 99.4 4.9E-13 1.7E-17 110.0 10.3 71 338-435 18-88 (106)
255 2a4v_A Peroxiredoxin DOT5; yea 99.4 2.2E-13 7.4E-18 121.5 8.7 102 8-115 21-132 (159)
256 1ep7_A Thioredoxin CH1, H-type 99.4 3.2E-13 1.1E-17 112.5 9.1 70 339-435 24-93 (112)
257 3cxg_A Putative thioredoxin; m 99.4 1.4E-13 4.7E-18 118.8 7.1 93 333-468 34-129 (133)
258 1w4v_A Thioredoxin, mitochondr 99.4 3.8E-13 1.3E-17 113.6 9.5 71 338-435 30-100 (119)
259 3gix_A Thioredoxin-like protei 99.4 5.7E-13 2E-17 117.3 11.0 70 338-434 22-91 (149)
260 3h79_A Thioredoxin-like protei 99.4 1.4E-12 4.8E-17 111.4 13.2 72 338-432 32-105 (127)
261 2o8v_B Thioredoxin 1; disulfid 99.4 4E-13 1.4E-17 115.1 9.7 71 338-435 39-109 (128)
262 3q6o_A Sulfhydryl oxidase 1; p 99.4 3.9E-12 1.3E-16 121.8 17.7 192 178-436 29-222 (244)
263 1qgv_A Spliceosomal protein U5 99.4 7.3E-13 2.5E-17 115.6 11.2 71 339-436 23-93 (142)
264 3m9j_A Thioredoxin; oxidoreduc 99.4 3.3E-13 1.1E-17 110.9 8.5 70 338-435 19-88 (105)
265 3ed3_A Protein disulfide-isome 99.4 1.7E-12 5.9E-17 127.9 15.1 69 19-112 34-103 (298)
266 2pwj_A Mitochondrial peroxired 99.4 2.6E-13 8.9E-18 122.5 8.3 100 11-115 33-150 (171)
267 3gnj_A Thioredoxin domain prot 99.4 8.9E-13 3.1E-17 109.5 10.7 70 339-435 22-91 (111)
268 2dml_A Protein disulfide-isome 99.4 6.7E-13 2.3E-17 113.8 10.0 72 338-435 34-105 (130)
269 2wz9_A Glutaredoxin-3; protein 99.4 5.5E-13 1.9E-17 118.0 9.5 89 338-469 31-119 (153)
270 2ppt_A Thioredoxin-2; thiredox 99.4 9.3E-13 3.2E-17 116.8 11.0 71 338-435 63-133 (155)
271 3fk8_A Disulphide isomerase; A 99.4 5E-13 1.7E-17 115.2 9.0 98 15-142 24-130 (133)
272 1xwb_A Thioredoxin; dimerizati 99.4 8E-13 2.7E-17 108.8 9.7 71 338-435 19-89 (106)
273 1thx_A Thioredoxin, thioredoxi 99.4 1.1E-12 3.9E-17 109.6 10.7 71 338-435 24-94 (115)
274 2fwh_A Thiol:disulfide interch 99.4 6E-13 2.1E-17 114.9 9.2 78 13-113 24-105 (134)
275 1r26_A Thioredoxin; redox-acti 99.4 6.6E-13 2.3E-17 113.2 9.2 70 338-435 36-105 (125)
276 2xc2_A Thioredoxinn; oxidoredu 99.4 3.8E-13 1.3E-17 113.1 7.6 72 335-435 29-100 (117)
277 1z6n_A Hypothetical protein PA 99.4 1.8E-13 6.3E-18 122.4 5.9 75 14-115 48-126 (167)
278 1x5d_A Protein disulfide-isome 99.4 2.9E-12 9.8E-17 110.2 13.1 73 339-435 25-98 (133)
279 1qgv_A Spliceosomal protein U5 99.4 2.2E-13 7.5E-18 119.0 5.9 85 4-115 5-92 (142)
280 3f3q_A Thioredoxin-1; His TAG, 99.4 6.6E-13 2.3E-17 110.2 8.5 75 13-115 17-92 (109)
281 3aps_A DNAJ homolog subfamily 99.4 3.8E-13 1.3E-17 114.0 7.2 68 339-432 21-88 (122)
282 2i4a_A Thioredoxin; acidophIle 99.4 2.3E-12 7.8E-17 106.2 11.6 71 338-435 19-89 (107)
283 1x5e_A Thioredoxin domain cont 99.4 1.9E-12 6.4E-17 110.4 11.4 68 340-433 23-90 (126)
284 3gix_A Thioredoxin-like protei 99.4 4E-13 1.4E-17 118.3 7.1 84 4-114 5-91 (149)
285 1faa_A Thioredoxin F; electron 99.4 8.2E-13 2.8E-17 112.3 8.5 73 336-435 34-106 (124)
286 2l6c_A Thioredoxin; oxidoreduc 99.4 6.5E-13 2.2E-17 110.5 7.7 86 1-115 1-87 (110)
287 3qfa_C Thioredoxin; protein-pr 99.4 7.9E-13 2.7E-17 111.1 8.2 72 16-115 27-99 (116)
288 2vlu_A Thioredoxin, thioredoxi 99.4 1.3E-12 4.5E-17 110.6 9.6 70 338-435 33-102 (122)
289 2vim_A Thioredoxin, TRX; thior 99.4 1.2E-12 4.1E-17 107.3 9.0 70 338-435 18-87 (104)
290 3hz4_A Thioredoxin; NYSGXRC, P 99.4 1.5E-12 5.2E-17 113.3 10.1 70 339-435 24-93 (140)
291 2oe3_A Thioredoxin-3; electron 99.4 1.1E-12 3.7E-17 109.9 8.7 69 339-435 30-98 (114)
292 2qsi_A Putative hydrogenase ex 99.4 9.2E-13 3.1E-17 112.2 8.2 69 20-115 33-104 (137)
293 2v2g_A Peroxiredoxin 6; oxidor 99.4 1.6E-12 5.5E-17 122.9 10.8 102 9-115 18-142 (233)
294 2f51_A Thioredoxin; electron t 99.4 7.9E-13 2.7E-17 111.5 7.7 70 339-435 23-95 (118)
295 1prx_A HORF6; peroxiredoxin, h 99.4 3.8E-12 1.3E-16 119.9 12.9 102 9-115 20-146 (224)
296 1fb6_A Thioredoxin M; electron 99.4 3.9E-12 1.3E-16 104.4 11.3 72 338-436 17-88 (105)
297 2lst_A Thioredoxin; structural 99.1 5.5E-14 1.9E-18 120.7 0.0 83 329-435 9-97 (130)
298 2yzu_A Thioredoxin; redox prot 99.4 2.7E-12 9.1E-17 106.0 10.3 70 339-435 18-87 (109)
299 2ju5_A Thioredoxin disulfide i 99.4 7.1E-13 2.4E-17 117.5 7.1 90 11-115 38-132 (154)
300 2j23_A Thioredoxin; immune pro 99.4 8.2E-13 2.8E-17 111.9 7.2 72 338-435 32-103 (121)
301 1syr_A Thioredoxin; SGPP, stru 99.4 1.7E-12 5.7E-17 108.3 8.8 69 339-435 26-94 (112)
302 1gh2_A Thioredoxin-like protei 99.4 1.6E-12 5.5E-17 107.3 8.6 70 18-115 19-89 (107)
303 2e0q_A Thioredoxin; electron t 99.4 2.5E-12 8.5E-17 105.2 9.5 70 338-435 15-84 (104)
304 2voc_A Thioredoxin; electron t 99.4 2.5E-12 8.4E-17 107.3 9.5 70 19-115 16-86 (112)
305 3a2v_A Probable peroxiredoxin; 99.4 2.9E-12 1E-16 121.9 11.2 100 12-115 22-139 (249)
306 3m9j_A Thioredoxin; oxidoreduc 99.4 2.1E-12 7.1E-17 106.1 8.9 73 15-115 15-88 (105)
307 2l5l_A Thioredoxin; structural 99.3 2.7E-12 9.1E-17 111.1 9.9 70 19-114 37-107 (136)
308 2vm1_A Thioredoxin, thioredoxi 99.3 2.2E-12 7.5E-17 108.4 9.1 69 339-435 28-96 (118)
309 3apq_A DNAJ homolog subfamily 99.3 9.9E-13 3.4E-17 123.0 7.6 105 326-471 101-205 (210)
310 1ti3_A Thioredoxin H, PTTRXH1; 99.3 1.5E-12 5.1E-17 108.5 7.9 71 338-436 25-95 (113)
311 3h79_A Thioredoxin-like protei 99.3 4.2E-12 1.4E-16 108.4 10.8 69 19-111 32-104 (127)
312 2dj3_A Protein disulfide-isome 99.3 1.2E-12 4.2E-17 112.7 7.4 83 326-432 11-94 (133)
313 1xcc_A 1-Cys peroxiredoxin; un 99.3 3.2E-12 1.1E-16 120.0 10.6 102 9-115 20-143 (220)
314 3uvt_A Thioredoxin domain-cont 99.3 4.4E-12 1.5E-16 105.2 10.3 73 339-435 21-93 (111)
315 1v98_A Thioredoxin; oxidoreduc 99.3 7.4E-12 2.5E-16 108.9 11.9 70 339-435 50-119 (140)
316 2pu9_C TRX-F, thioredoxin F-ty 99.3 3.8E-12 1.3E-16 105.8 9.5 73 16-115 20-93 (111)
317 3hz4_A Thioredoxin; NYSGXRC, P 99.3 4.3E-12 1.5E-16 110.4 10.1 70 19-115 23-93 (140)
318 1t00_A Thioredoxin, TRX; redox 99.3 5.8E-12 2E-16 104.8 10.3 70 19-115 22-92 (112)
319 3gnj_A Thioredoxin domain prot 99.3 7.7E-12 2.6E-16 103.8 10.9 69 19-114 21-90 (111)
320 2xhf_A Peroxiredoxin 5; oxidor 99.3 2.1E-12 7E-17 115.5 7.7 114 319-436 19-149 (171)
321 2i1u_A Thioredoxin, TRX, MPT46 99.3 3.3E-12 1.1E-16 107.9 8.6 71 338-435 29-99 (121)
322 2trx_A Thioredoxin; electron t 99.3 6.8E-12 2.3E-16 103.6 10.4 70 19-115 19-89 (108)
323 3tco_A Thioredoxin (TRXA-1); d 99.3 5.7E-12 1.9E-16 104.1 9.8 70 19-115 20-90 (109)
324 3ira_A Conserved protein; meth 99.3 2.6E-12 8.9E-17 115.0 8.2 80 338-435 38-120 (173)
325 2qgv_A Hydrogenase-1 operon pr 99.3 1E-12 3.5E-17 112.3 5.2 70 19-115 33-106 (140)
326 3dxb_A Thioredoxin N-terminall 99.3 4E-12 1.4E-16 119.9 9.9 93 338-471 29-121 (222)
327 3f9u_A Putative exported cytoc 99.3 6.2E-13 2.1E-17 120.1 4.1 100 13-115 40-146 (172)
328 2dj0_A Thioredoxin-related tra 99.3 2.7E-12 9.1E-17 111.3 8.0 77 335-437 22-104 (137)
329 1dby_A Chloroplast thioredoxin 99.3 1.4E-11 4.6E-16 101.6 11.9 70 19-115 18-88 (107)
330 1nsw_A Thioredoxin, TRX; therm 99.3 7.1E-12 2.4E-16 102.9 10.1 70 19-115 16-86 (105)
331 3uvt_A Thioredoxin domain-cont 99.3 1.3E-11 4.3E-16 102.4 11.7 71 20-115 21-93 (111)
332 3d6i_A Monothiol glutaredoxin- 99.3 5.7E-12 1.9E-16 104.9 9.4 72 18-115 19-91 (112)
333 1xiy_A Peroxiredoxin, pfaop; a 99.3 6.3E-12 2.2E-16 113.8 10.3 141 319-464 6-178 (182)
334 1w4v_A Thioredoxin, mitochondr 99.3 9.2E-12 3.1E-16 105.0 10.7 70 19-115 30-100 (119)
335 3qou_A Protein YBBN; thioredox 99.3 5.3E-12 1.8E-16 124.0 10.7 74 336-436 23-96 (287)
336 2djj_A PDI, protein disulfide- 99.3 3.7E-12 1.3E-16 107.6 8.2 81 326-432 11-94 (121)
337 2dj1_A Protein disulfide-isome 99.3 4.9E-12 1.7E-16 109.9 9.0 70 19-113 33-104 (140)
338 2oe3_A Thioredoxin-3; electron 99.3 2.1E-12 7.2E-17 108.1 6.4 69 19-115 29-98 (114)
339 3p2a_A Thioredoxin 2, putative 99.3 7.1E-12 2.4E-16 110.1 10.0 71 18-115 53-124 (148)
340 3evi_A Phosducin-like protein 99.3 4.5E-12 1.5E-16 106.4 8.3 69 339-438 23-91 (118)
341 2o8v_B Thioredoxin 1; disulfid 99.3 5.4E-12 1.8E-16 108.0 8.9 70 19-115 39-109 (128)
342 2l6c_A Thioredoxin; oxidoreduc 99.3 4.6E-12 1.6E-16 105.3 8.2 71 338-436 18-88 (110)
343 1xfl_A Thioredoxin H1; AT3G510 99.3 9.4E-12 3.2E-16 105.8 10.3 70 18-115 36-106 (124)
344 3die_A Thioredoxin, TRX; elect 99.3 9.8E-12 3.3E-16 102.1 10.2 70 19-115 18-88 (106)
345 2kuc_A Putative disulphide-iso 99.3 1.4E-12 4.9E-17 111.8 5.3 80 12-115 19-102 (130)
346 2i4a_A Thioredoxin; acidophIle 99.3 1.8E-11 6E-16 100.8 11.7 70 19-115 19-89 (107)
347 1zma_A Bacterocin transport ac 99.3 6.9E-12 2.3E-16 105.6 9.3 74 339-435 29-102 (118)
348 1oaz_A Thioredoxin 1; immune s 99.3 1.5E-12 5.1E-17 110.6 5.0 71 338-435 20-104 (123)
349 2ppt_A Thioredoxin-2; thiredox 99.3 8.4E-12 2.9E-16 110.6 10.1 70 19-115 63-133 (155)
350 1x5d_A Protein disulfide-isome 99.3 1.3E-11 4.4E-16 106.1 10.9 71 19-114 24-97 (133)
351 1thx_A Thioredoxin, thioredoxi 99.3 1E-11 3.5E-16 103.7 10.0 70 19-115 24-94 (115)
352 1r26_A Thioredoxin; redox-acti 99.3 3.8E-12 1.3E-16 108.4 7.5 69 19-115 36-105 (125)
353 2xc2_A Thioredoxinn; oxidoredu 99.3 4.5E-12 1.6E-16 106.5 7.7 72 15-115 28-100 (117)
354 2wz9_A Glutaredoxin-3; protein 99.3 9.2E-12 3.2E-16 110.1 10.1 69 19-115 31-100 (153)
355 1zma_A Bacterocin transport ac 99.3 1.3E-11 4.5E-16 103.8 10.4 74 19-115 28-102 (118)
356 3keb_A Probable thiol peroxida 99.3 1.2E-11 4E-16 115.2 10.8 100 8-115 36-152 (224)
357 3emx_A Thioredoxin; structural 99.3 1.8E-12 6.2E-17 112.1 4.9 76 341-436 33-108 (135)
358 3d22_A TRXH4, thioredoxin H-ty 99.3 3.3E-12 1.1E-16 110.9 6.5 72 16-115 42-114 (139)
359 3cxg_A Putative thioredoxin; m 99.3 4.5E-12 1.5E-16 109.3 7.2 72 15-114 35-110 (133)
360 1xwb_A Thioredoxin; dimerizati 99.3 8.3E-12 2.8E-16 102.6 8.3 73 16-115 16-89 (106)
361 1ep7_A Thioredoxin CH1, H-type 99.3 1.7E-11 5.9E-16 101.9 10.3 69 20-115 24-93 (112)
362 3evi_A Phosducin-like protein 99.3 6.9E-12 2.4E-16 105.3 7.8 87 19-141 22-110 (118)
363 1x5e_A Thioredoxin domain cont 99.3 1.6E-11 5.5E-16 104.5 10.1 69 20-114 23-91 (126)
364 2dml_A Protein disulfide-isome 99.3 1.2E-11 4.2E-16 105.8 9.3 67 19-111 34-101 (130)
365 2dj3_A Protein disulfide-isome 99.3 5.2E-12 1.8E-16 108.7 6.9 69 19-111 24-93 (133)
366 2f51_A Thioredoxin; electron t 99.3 1.2E-11 4E-16 104.2 8.8 70 19-115 22-95 (118)
367 1fb6_A Thioredoxin M; electron 99.3 1.9E-11 6.5E-16 100.2 9.6 70 19-115 17-87 (105)
368 3sbc_A Peroxiredoxin TSA1; alp 99.3 3.2E-11 1.1E-15 111.3 12.0 103 9-115 41-158 (216)
369 2vlu_A Thioredoxin, thioredoxi 99.3 2E-11 7E-16 103.2 9.9 69 19-115 33-102 (122)
370 1faa_A Thioredoxin F; electron 99.3 1.9E-11 6.6E-16 103.7 9.7 71 18-115 35-106 (124)
371 1fo5_A Thioredoxin; disulfide 99.3 9.3E-12 3.2E-16 97.9 7.2 64 340-432 3-66 (85)
372 1mek_A Protein disulfide isome 99.3 2.2E-12 7.6E-17 108.5 3.8 72 338-433 23-94 (120)
373 2dj0_A Thioredoxin-related tra 99.2 1E-11 3.5E-16 107.6 7.9 74 16-115 22-102 (137)
374 3t58_A Sulfhydryl oxidase 1; o 99.2 4.5E-11 1.5E-15 126.2 14.3 188 178-435 29-221 (519)
375 1nho_A Probable thioredoxin; b 99.2 8.8E-12 3E-16 98.0 6.7 63 341-432 3-65 (85)
376 2e0q_A Thioredoxin; electron t 99.2 3.1E-11 1.1E-15 98.5 10.3 69 19-115 15-84 (104)
377 2lst_A Thioredoxin; structural 98.9 6.4E-13 2.2E-17 114.0 0.0 79 10-112 9-92 (130)
378 2dbc_A PDCL2, unnamed protein 99.2 1.6E-11 5.6E-16 106.0 8.8 67 339-436 30-96 (135)
379 1ti3_A Thioredoxin H, PTTRXH1; 99.2 4.2E-11 1.4E-15 99.6 11.0 72 16-115 22-94 (113)
380 2vim_A Thioredoxin, TRX; thior 99.2 2.6E-11 9E-16 99.1 9.6 72 16-115 15-87 (104)
381 1wou_A Thioredoxin -related pr 99.2 1.4E-11 5E-16 104.5 8.2 78 338-434 23-107 (123)
382 1syr_A Thioredoxin; SGPP, stru 99.2 3E-11 1E-15 100.6 9.7 69 19-115 25-94 (112)
383 2es7_A Q8ZP25_salty, putative 99.2 4.6E-12 1.6E-16 110.3 4.6 90 339-470 34-127 (142)
384 2yzu_A Thioredoxin; redox prot 99.2 4.3E-11 1.5E-15 98.6 10.4 70 19-115 17-87 (109)
385 2j23_A Thioredoxin; immune pro 99.2 5.6E-12 1.9E-16 106.7 5.0 71 19-115 32-103 (121)
386 3aps_A DNAJ homolog subfamily 99.2 2.4E-11 8.3E-16 102.7 8.7 67 19-111 20-87 (122)
387 3qou_A Protein YBBN; thioredox 99.2 2E-11 6.7E-16 119.9 9.2 70 19-115 25-95 (287)
388 2i1u_A Thioredoxin, TRX, MPT46 99.2 4.2E-11 1.4E-15 101.0 10.0 70 19-115 29-99 (121)
389 3emx_A Thioredoxin; structural 99.2 7.4E-12 2.5E-16 108.2 5.2 75 21-115 33-107 (135)
390 1v98_A Thioredoxin; oxidoreduc 99.2 5.7E-11 2E-15 103.2 10.9 70 19-115 49-119 (140)
391 3kp8_A Vkorc1/thioredoxin doma 99.2 1.3E-12 4.3E-17 107.8 -0.8 73 331-432 4-76 (106)
392 3dxb_A Thioredoxin N-terminall 99.2 4.8E-11 1.6E-15 112.4 10.0 70 19-115 29-99 (222)
393 2vm1_A Thioredoxin, thioredoxi 99.2 6.1E-11 2.1E-15 99.4 9.6 69 19-115 27-96 (118)
394 3ph9_A Anterior gradient prote 99.2 7.1E-12 2.4E-16 109.9 3.7 98 16-143 40-140 (151)
395 3kp8_A Vkorc1/thioredoxin doma 99.2 2.7E-12 9.3E-17 105.7 1.0 73 11-112 3-76 (106)
396 1sen_A Thioredoxin-like protei 99.2 2.5E-12 8.7E-17 115.1 0.8 78 13-115 39-119 (164)
397 3iv4_A Putative oxidoreductase 99.2 4.8E-11 1.6E-15 97.4 8.2 76 339-439 24-100 (112)
398 3apq_A DNAJ homolog subfamily 99.2 1E-10 3.5E-15 109.1 11.8 70 18-114 112-182 (210)
399 4eo3_A Bacterioferritin comigr 99.2 1.6E-10 5.6E-15 114.6 13.5 100 8-115 12-117 (322)
400 1wmj_A Thioredoxin H-type; str 99.2 2.2E-12 7.5E-17 110.5 -0.0 70 338-435 35-104 (130)
401 3ed3_A Protein disulfide-isome 99.2 7.8E-11 2.7E-15 116.0 10.2 70 339-433 35-104 (298)
402 3ga4_A Dolichyl-diphosphooligo 99.2 1.8E-10 6E-15 103.1 11.5 71 338-431 36-115 (178)
403 2dbc_A PDCL2, unnamed protein 99.2 8.3E-11 2.8E-15 101.5 9.0 88 19-142 29-118 (135)
404 3ira_A Conserved protein; meth 99.2 3.3E-11 1.1E-15 107.9 6.6 86 12-115 31-120 (173)
405 3dml_A Putative uncharacterize 99.2 8.6E-12 2.9E-16 103.3 2.6 74 339-435 18-91 (116)
406 2yj7_A LPBCA thioredoxin; oxid 98.8 3.6E-12 1.2E-16 104.6 0.0 70 339-435 19-88 (106)
407 4f82_A Thioredoxin reductase; 99.1 9.3E-11 3.2E-15 104.8 9.1 100 11-115 37-154 (176)
408 1mek_A Protein disulfide isome 99.1 3.1E-11 1.1E-15 101.4 5.5 70 19-113 23-94 (120)
409 3tue_A Tryparedoxin peroxidase 99.1 1.9E-10 6.6E-15 106.4 11.2 104 8-115 44-162 (219)
410 3iv4_A Putative oxidoreductase 99.1 4E-11 1.4E-15 97.8 5.8 88 3-115 7-96 (112)
411 3ga4_A Dolichyl-diphosphooligo 99.1 1.6E-10 5.5E-15 103.4 9.7 66 20-110 37-113 (178)
412 2djj_A PDI, protein disulfide- 99.1 7.8E-11 2.7E-15 99.4 7.0 66 19-111 24-93 (121)
413 1a0r_P Phosducin, MEKA, PP33; 99.1 4.3E-11 1.5E-15 113.5 5.8 71 338-437 132-202 (245)
414 1wou_A Thioredoxin -related pr 99.1 1.2E-10 4.3E-15 98.6 7.7 79 16-113 20-106 (123)
415 3dml_A Putative uncharacterize 99.1 1.2E-11 4.2E-16 102.4 1.0 71 22-115 21-91 (116)
416 1a0r_P Phosducin, MEKA, PP33; 99.1 8.1E-11 2.8E-15 111.6 6.8 91 19-142 132-223 (245)
417 1oaz_A Thioredoxin 1; immune s 99.1 4.1E-11 1.4E-15 101.7 3.9 70 19-115 20-104 (123)
418 2r2j_A Thioredoxin domain-cont 99.1 2.7E-10 9.4E-15 116.5 10.1 72 339-434 22-96 (382)
419 1fo5_A Thioredoxin; disulfide 99.1 1.4E-10 4.7E-15 91.0 6.0 62 22-112 5-66 (85)
420 1nho_A Probable thioredoxin; b 99.1 9.8E-11 3.3E-15 91.9 5.0 62 22-112 4-65 (85)
421 3us3_A Calsequestrin-1; calciu 99.1 2E-09 6.8E-14 109.4 15.9 164 178-428 29-200 (367)
422 1ilo_A Conserved hypothetical 99.1 4.7E-10 1.6E-14 86.2 8.6 62 22-115 2-63 (77)
423 3qcp_A QSOX from trypanosoma b 99.1 1.6E-10 5.5E-15 118.9 7.4 71 338-431 41-116 (470)
424 1ilo_A Conserved hypothetical 99.0 4E-10 1.4E-14 86.6 7.7 62 342-435 2-63 (77)
425 1sji_A Calsequestrin 2, calseq 99.0 9.9E-10 3.4E-14 110.9 12.7 163 178-429 27-199 (350)
426 2es7_A Q8ZP25_salty, putative 99.0 1.1E-10 3.9E-15 101.3 4.8 66 22-115 37-106 (142)
427 2trc_P Phosducin, MEKA, PP33; 99.0 1.3E-10 4.5E-15 108.6 5.0 71 338-437 119-189 (217)
428 2trc_P Phosducin, MEKA, PP33; 99.0 1.5E-10 5.2E-15 108.2 5.4 89 19-141 119-209 (217)
429 2yj7_A LPBCA thioredoxin; oxid 98.6 3E-11 1E-15 99.0 0.0 69 19-114 18-87 (106)
430 2b5e_A Protein disulfide-isome 99.0 1.4E-09 4.8E-14 115.5 11.6 69 338-432 30-98 (504)
431 3qcp_A QSOX from trypanosoma b 99.0 6.8E-10 2.3E-14 114.2 8.7 67 20-110 42-115 (470)
432 1wmj_A Thioredoxin H-type; str 98.9 7.4E-11 2.5E-15 100.8 -0.5 70 18-115 34-104 (130)
433 2dlx_A UBX domain-containing p 98.9 3.3E-09 1.1E-13 92.9 9.3 73 339-435 42-118 (153)
434 3f8u_A Protein disulfide-isome 98.9 3E-08 1E-12 104.5 18.4 170 37-271 255-437 (481)
435 1ttz_A Conserved hypothetical 98.8 8.3E-09 2.8E-13 81.1 7.1 58 343-434 3-60 (87)
436 2fgx_A Putative thioredoxin; N 98.8 1.5E-08 5.2E-13 82.5 8.5 63 22-114 31-93 (107)
437 1un2_A DSBA, thiol-disulfide i 98.8 4.9E-09 1.7E-13 96.3 6.2 117 248-385 39-159 (197)
438 2djk_A PDI, protein disulfide- 98.8 8.5E-09 2.9E-13 88.5 7.0 67 339-432 23-92 (133)
439 2fgx_A Putative thioredoxin; N 98.8 1.6E-08 5.5E-13 82.4 8.1 64 341-434 30-93 (107)
440 3hd5_A Thiol:disulfide interch 98.8 1.7E-08 5.8E-13 92.8 9.1 43 338-383 24-66 (195)
441 4f9z_D Endoplasmic reticulum r 98.8 5.4E-08 1.8E-12 91.7 12.3 192 20-305 27-225 (227)
442 1xiy_A Peroxiredoxin, pfaop; a 98.7 2.5E-08 8.5E-13 90.1 9.2 100 11-115 33-150 (182)
443 1ttz_A Conserved hypothetical 98.7 3E-08 1E-12 77.9 7.8 58 23-114 3-60 (87)
444 2xhf_A Peroxiredoxin 5; oxidor 98.7 2.2E-08 7.7E-13 89.2 8.0 100 11-115 32-148 (171)
445 1eej_A Thiol:disulfide interch 98.7 1.6E-07 5.3E-12 87.8 13.9 91 334-432 81-192 (216)
446 2k8s_A Thioredoxin; dimer, str 98.7 1.1E-08 3.6E-13 79.4 4.4 65 343-435 4-68 (80)
447 3gyk_A 27KDA outer membrane pr 98.7 1.9E-07 6.6E-12 83.9 13.4 50 329-382 12-61 (175)
448 2k8s_A Thioredoxin; dimer, str 98.7 2.1E-08 7.2E-13 77.7 5.9 64 23-114 4-67 (80)
449 2djk_A PDI, protein disulfide- 98.6 3.4E-08 1.1E-12 84.7 6.5 106 178-320 22-130 (133)
450 2dlx_A UBX domain-containing p 98.6 6E-08 2.1E-12 84.9 8.0 73 18-114 40-117 (153)
451 1hyu_A AHPF, alkyl hydroperoxi 98.6 3.4E-07 1.1E-11 97.4 15.5 68 338-435 116-183 (521)
452 2c0g_A ERP29 homolog, windbeut 98.6 2.9E-07 9.8E-12 87.2 11.9 67 339-431 33-105 (248)
453 3gyk_A 27KDA outer membrane pr 98.6 3.1E-07 1.1E-11 82.6 11.7 51 8-61 10-61 (175)
454 2c0g_A ERP29 homolog, windbeut 98.5 2.6E-07 8.8E-12 87.6 9.9 63 19-111 32-105 (248)
455 2e7p_A Glutaredoxin; thioredox 98.5 6.7E-08 2.3E-12 80.5 5.2 68 339-435 19-86 (116)
456 2e7p_A Glutaredoxin; thioredox 98.5 1.1E-07 3.7E-12 79.3 6.1 67 19-114 18-85 (116)
457 2znm_A Thiol:disulfide interch 98.5 4.9E-07 1.7E-11 82.8 11.0 43 338-383 21-63 (195)
458 3h93_A Thiol:disulfide interch 98.5 5.8E-07 2E-11 82.2 11.4 43 338-383 24-66 (192)
459 2qc7_A ERP31, ERP28, endoplasm 98.5 3.4E-07 1.2E-11 86.4 9.3 65 20-111 22-94 (240)
460 1eej_A Thiol:disulfide interch 98.5 8.9E-07 3.1E-11 82.6 11.5 95 12-113 78-193 (216)
461 1wjk_A C330018D20RIK protein; 98.5 3.2E-07 1.1E-11 74.2 7.4 63 339-433 15-77 (100)
462 3kp9_A Vkorc1/thioredoxin doma 98.4 8.3E-08 2.8E-12 92.8 3.6 62 342-432 200-261 (291)
463 2qc7_A ERP31, ERP28, endoplasm 98.4 7.7E-07 2.6E-11 83.9 10.2 66 339-431 22-94 (240)
464 1ego_A Glutaredoxin; electron 98.4 2.9E-07 9.7E-12 71.9 6.0 66 23-114 3-70 (85)
465 3hd5_A Thiol:disulfide interch 98.4 2E-06 6.7E-11 78.8 12.7 42 19-62 24-66 (195)
466 4f9z_D Endoplasmic reticulum r 98.4 2.6E-06 8.9E-11 80.1 13.5 167 180-431 28-201 (227)
467 1v58_A Thiol:disulfide interch 98.4 2.8E-06 9.7E-11 80.6 12.5 93 335-432 93-212 (241)
468 1ego_A Glutaredoxin; electron 98.4 4.5E-07 1.5E-11 70.7 5.6 66 343-434 3-70 (85)
469 3kp9_A Vkorc1/thioredoxin doma 98.3 1.6E-07 5.4E-12 90.8 2.9 72 12-112 189-261 (291)
470 2rem_A Disulfide oxidoreductas 98.3 5.3E-06 1.8E-10 75.6 12.2 42 338-382 24-65 (193)
471 1wjk_A C330018D20RIK protein; 98.3 1E-06 3.5E-11 71.2 6.3 60 22-113 18-77 (100)
472 2h8l_A Protein disulfide-isome 98.3 2.8E-05 9.6E-10 74.2 17.0 205 22-319 27-244 (252)
473 1t3b_A Thiol:disulfide interch 98.3 2.7E-06 9.1E-11 79.0 9.3 86 338-431 85-191 (211)
474 1v58_A Thiol:disulfide interch 98.3 5.7E-06 1.9E-10 78.4 11.6 100 9-112 86-212 (241)
475 1hyu_A AHPF, alkyl hydroperoxi 98.2 2.1E-06 7.2E-11 91.2 9.3 68 18-115 115-183 (521)
476 3ec3_A Protein disulfide-isome 98.2 2.8E-05 9.7E-10 74.0 16.3 201 20-320 25-243 (250)
477 3h93_A Thiol:disulfide interch 98.2 8.8E-06 3E-10 74.2 11.2 42 19-62 24-66 (192)
478 3hz8_A Thiol:disulfide interch 98.2 8.3E-06 2.8E-10 74.5 10.8 43 338-383 23-65 (193)
479 1z6m_A Conserved hypothetical 98.1 1.8E-05 6.3E-10 70.8 12.0 51 332-383 20-70 (175)
480 1t3b_A Thiol:disulfide interch 98.1 1.8E-05 6.3E-10 73.3 10.8 87 18-111 84-191 (211)
481 1z6m_A Conserved hypothetical 98.0 5.1E-05 1.7E-09 67.9 12.9 55 8-62 15-70 (175)
482 1r7h_A NRDH-redoxin; thioredox 98.0 2.6E-05 8.9E-10 58.8 8.2 59 343-433 3-61 (75)
483 2znm_A Thiol:disulfide interch 98.0 2.3E-05 7.8E-10 71.5 9.3 42 19-62 21-63 (195)
484 1h75_A Glutaredoxin-like prote 98.0 3.3E-05 1.1E-09 59.3 8.7 59 23-113 3-61 (81)
485 1h75_A Glutaredoxin-like prote 98.0 2.5E-05 8.4E-10 60.0 7.8 59 343-433 3-61 (81)
486 1r7h_A NRDH-redoxin; thioredox 97.9 5.3E-05 1.8E-09 57.0 8.7 59 23-113 3-61 (75)
487 3hz8_A Thiol:disulfide interch 97.9 0.00012 4.1E-09 66.7 12.1 42 19-62 23-65 (193)
488 1kte_A Thioltransferase; redox 97.8 2.4E-05 8.1E-10 63.5 6.3 66 22-114 13-80 (105)
489 2hze_A Glutaredoxin-1; thiored 97.8 2.2E-05 7.5E-10 64.9 5.5 68 22-114 20-87 (114)
490 2rem_A Disulfide oxidoreductas 97.8 0.00029 1E-08 63.9 13.6 41 19-61 24-65 (193)
491 3gv1_A Disulfide interchange p 97.8 0.00015 5E-09 62.8 10.2 86 338-433 13-121 (147)
492 3gv1_A Disulfide interchange p 97.7 0.00019 6.7E-09 62.0 10.0 94 11-113 5-121 (147)
493 2cq9_A GLRX2 protein, glutared 97.7 9.9E-05 3.4E-09 62.5 8.0 62 23-114 29-92 (130)
494 2hze_A Glutaredoxin-1; thiored 97.7 3E-05 1E-09 64.1 4.6 66 341-434 19-87 (114)
495 1kte_A Thioltransferase; redox 97.7 3.9E-05 1.3E-09 62.2 5.0 68 343-435 14-81 (105)
496 3bj5_A Protein disulfide-isome 97.6 6.9E-05 2.4E-09 65.0 6.4 104 181-320 34-142 (147)
497 2ht9_A Glutaredoxin-2; thiored 97.6 0.00012 4.2E-09 63.2 7.7 62 23-114 51-114 (146)
498 4dvc_A Thiol:disulfide interch 97.6 0.00019 6.4E-09 64.5 9.2 41 339-382 21-61 (184)
499 3feu_A Putative lipoprotein; a 97.6 0.00033 1.1E-08 63.2 10.5 39 339-382 22-60 (185)
500 2cq9_A GLRX2 protein, glutared 97.6 0.00013 4.6E-09 61.7 7.3 62 345-434 31-92 (130)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.97 E-value=5e-30 Score=288.13 Aligned_cols=293 Identities=14% Similarity=0.135 Sum_probs=203.3
Q ss_pred cccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 15 LDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 15 l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
+.++.|+ ++|+|||+||++|+.++|.|.+++++++. ++.++.|+++... .+++
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~--~v~~~~vd~~~~~------------------------~~~~ 503 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYG--QLKVGTLDCTIHE------------------------GLCN 503 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHH
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEeCCCCH------------------------HHHH
Confidence 3444788 99999999999999999999999999974 5889999888654 3889
Q ss_pred hcCCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCceee
Q 008845 94 LFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKIS 173 (551)
Q Consensus 94 ~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 173 (551)
.|+|.++|+++++ ++|++... .| ..+.+.+.++++.... ..+.. +.....+-++
T Consensus 504 ~~~v~~~Pt~~~~-~~g~~~~~--------~g----~~~~~~l~~fi~~~~~----~~v~~-l~~~~f~~~v-------- 557 (780)
T 3apo_A 504 MYNIQAYPTTVVF-NQSSIHEY--------EG----HHSAEQILEFIEDLRN----PSVVS-LTPSTFNELV-------- 557 (780)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEE--------CS----CSCHHHHHHHHHHHHS----CSEEE-CCHHHHHHHT--------
T ss_pred HcCCCcCCeEEEE-cCCceeee--------cC----cccHHHHHHHHHhhcc----cceee-cCcccHHHHh--------
Confidence 9999999999999 56766322 12 1245566666544211 11111 1110000000
Q ss_pred ccccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHh
Q 008845 174 VSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLAR 253 (551)
Q Consensus 174 ~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~ 253 (551)
.....+..+++.|+++||++|..+.|.+.+++..++++ +.|+.+|.+. +..+++
T Consensus 558 ~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~-----v~~~~vd~~~---------------------~~~l~~ 611 (780)
T 3apo_A 558 KQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL-----INVGSVDCGQ---------------------YHSFCT 611 (780)
T ss_dssp TTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----SEEEEEETTT---------------------THHHHH
T ss_pred hccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC-----eEEEEEECcc---------------------hHHHHH
Confidence 00112466889999999999999999999999999864 6677777654 567889
Q ss_pred hcCcCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCeee
Q 008845 254 YFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKVP 333 (551)
Q Consensus 254 ~f~v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v~ 333 (551)
.|+|+++|+++++..+++..... +. | .....+.+.+.+++.... +..+...++..+.
T Consensus 612 ~~~v~~~Pti~~~~~~~~~~~~~----~~-y--~g~~~~~~~l~~fi~~~~----------------~~~v~~l~~~~~~ 668 (780)
T 3apo_A 612 QENVQRYPEIRFYPQKSSKAYQY----HS-Y--NGWNRDAYSLRSWGLGFL----------------PQASIDLTPQTFN 668 (780)
T ss_dssp HTTCCSSSEEEEECCCSSSCCSC----EE-C--CCSCCSHHHHHHHHHTTS----------------CCCSEEECHHHHH
T ss_pred HcCCCCCCeEEEEcCCCcCccch----hh-c--CCCCCCHHHHHHHHhhhc----------------ccccccCCHHHHH
Confidence 99999999999997644311000 00 0 011336677777765321 1111122222221
Q ss_pred -cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHH
Q 008845 334 -VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLS 412 (551)
Q Consensus 334 -l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~ 412 (551)
.-.-.+++++|+|||+||++|+.+.|.|++++++++++ +.++.|+++..+ .++
T Consensus 669 ~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~---~~~~~vd~~~~~-----------------------~~~ 722 (780)
T 3apo_A 669 EKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK---VRAGKVDCQAYP-----------------------QTC 722 (780)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTCH-----------------------HHH
T ss_pred HHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---ceEEEEECCCCH-----------------------HHH
Confidence 01113789999999999999999999999999999764 889999887664 589
Q ss_pred HhcCCCCcceEEEECCCCcEEEc
Q 008845 413 RKFKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 413 ~~~~v~~~P~~~lid~~G~i~~~ 435 (551)
+.|+|+++|+++++ ++|+++.+
T Consensus 723 ~~~~v~~~Pt~~~~-~~g~~~~~ 744 (780)
T 3apo_A 723 QKAGIKAYPSVKLY-QYERAKKS 744 (780)
T ss_dssp HHTTCCSSSEEEEE-EEETTTTE
T ss_pred HhcCCCcCCEEEEE-cCCCcccc
Confidence 99999999999999 78877644
No 2
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.96 E-value=2.8e-27 Score=251.15 Aligned_cols=359 Identities=17% Similarity=0.268 Sum_probs=213.0
Q ss_pred Cc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCC
Q 008845 20 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM 98 (551)
Q Consensus 20 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 98 (551)
++ ++|+||||||+||+.+.|.|.++++.++.. +.++.|+++... .+++.|+|.
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--v~~~~vd~~~~~------------------------~l~~~~~v~ 74 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI--VPLAKVDCTANT------------------------NTCNKYGVS 74 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--CCEEEEETTTCH------------------------HHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc--eEEEEEECCCCH------------------------HHHHhcCCC
Confidence 47 999999999999999999999999999853 778888888764 499999999
Q ss_pred CCcEEEEEcCCCeEEE-cCcch-------hhhhc-CCCCCCc-hHHHHHHHHHHHHHHHhhcccccccccC---------
Q 008845 99 GIPHLVILDENGKVLS-DGGVE-------IIREY-GVEGYPF-TVERIKEMKEQEERAKREQSLRSVLTSH--------- 159 (551)
Q Consensus 99 ~~P~~~lid~~G~i~~-~~~~~-------~~~~~-~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------- 159 (551)
++||++++ ++|+.+. ..|.. ++... +...... +.+.++++++.. ...+..+..+.
T Consensus 75 ~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~~~vv~~~~~~~~~~~~~f~ 148 (481)
T 3f8u_A 75 GYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDK-----DASIVGFFDDSFSEAHSEFL 148 (481)
T ss_dssp EESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSS-----SCEEEEEESCTTCHHHHHHH
T ss_pred CCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcC-----CcEEEEEECCCccchHHHHH
Confidence 99999999 7886543 33421 11111 1111111 223333332211 00000011000
Q ss_pred --------CcceeecCCCceeeccccCCcEEEEEE-----------------------------ecCCCccchhhhHHHH
Q 008845 160 --------SRDFVISSDGRKISVSDLEGKTIGLYF-----------------------------SMSSYKASAEFTPRLV 202 (551)
Q Consensus 160 --------~~d~~~~~~~~~~~~~~~~gk~v~l~f-----------------------------~~~~~~~c~~~~~~~~ 202 (551)
...|....+.+.......++..+++|. ..++.|.+.++++...
T Consensus 149 ~~a~~~~~~~~F~~~~~~~~~~~~~v~~~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~ 228 (481)
T 3f8u_A 149 KAASNLRDNYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNK 228 (481)
T ss_dssp HHHHHHTTTSCEEEECCHHHHHHHCSSSEEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTH
T ss_pred HHHHHhccCceEEEECCHHHHHHhCCCCCcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHH
Confidence 001111111111111112222222221 2223344445554442
Q ss_pred HHHHHHhcCCCceEEEEeecccC--HHH---HHH--------HhcC---CCCccccCCchhHHHHHhhcCcC----Ccce
Q 008845 203 EVYEKLKGKGESFEIVLISLDDE--EES---FKR--------DLGS---MPWLALPFKDKSREKLARYFELS----TLPT 262 (551)
Q Consensus 203 ~~~~~~~~~~~~~~iv~v~~d~~--~~~---~~~--------~~~~---~~~~av~~~d~~~~~l~~~f~v~----~~P~ 262 (551)
. .+. +.++.++|...+.. .+. +.+ +..+ +.++.+.. .....++++||+. ..|.
T Consensus 229 ~---~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~--~~~~~~l~~~gl~~~~~~~P~ 301 (481)
T 3f8u_A 229 D---LIQ--GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASR--KTFSHELSDFGLESTAGEIPV 301 (481)
T ss_dssp H---HHT--TSSEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEET--TTTHHHHGGGTCCCCTTCSCE
T ss_pred H---Hhc--CCCceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcH--HHHHHHHHHcCCCcccCCCcE
Confidence 2 222 23455566554422 111 111 1122 33333322 2367788999997 6899
Q ss_pred EEEECCCC-CcccccchhhhhhcCCCCCCCChh--hHHHHHHHHHHHHhhhhhhhhhccCCcccee-cCCCCeeecccC-
Q 008845 263 LVIIGPDG-KTLHSNVAEAIEEHGVGAFPFTPE--KFAELAEIQRAKEESQTLESVLVSGDLDFVV-GKNGGKVPVSDL- 337 (551)
Q Consensus 263 lvi~~~~g-k~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~~g~~v~l~~~- 337 (551)
+++++.++ ++... -.++.+ .+..|+....++...+.+++...+...+-.+ ..+++.+.....
T Consensus 302 ~~i~~~~~~ky~~~-------------~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~ 368 (481)
T 3f8u_A 302 VAIRTAKGEKFVMQ-------------EEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN 368 (481)
T ss_dssp EEEECSSSCEEECC-------------SCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC
T ss_pred EEEEcCCCcccCCC-------------cccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc
Confidence 99998655 33222 145777 9999999999998888888877665433222 444444432222
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+|+|+|+|||+||++|+++.|.|.++++.+++. .++.++.|+.+.+ ++++.|+|
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~~v~~~~id~~~~------------------------~~~~~~~v 423 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD-PNIVIAKMDATAN------------------------DVPSPYEV 423 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTSS------------------------CCCTTCCC
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccC-CCEEEEEEECCch------------------------hhHhhCCC
Confidence 3899999999999999999999999999999763 2466766666543 25678999
Q ss_pred CCcceEEEECCCCcE-EEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 418 SGIPMLVAIGPSGRT-ITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 418 ~~~P~~~lid~~G~i-~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
.++||+++++++|++ +.+. .| ....+.|.+.|++.+..
T Consensus 424 ~~~Pt~~~~~~~~~~~~~~~-------~G-------~~~~~~l~~~l~~~~~~ 462 (481)
T 3f8u_A 424 RGFPTIYFSPANKKLNPKKY-------EG-------GRELSDFISYLQREATN 462 (481)
T ss_dssp CSSSEEEEECTTCTTSCEEC-------CS-------CCSHHHHHHHHHHHCSS
T ss_pred cccCEEEEEeCCCeEeeeEe-------CC-------CCCHHHHHHHHHHhcCC
Confidence 999999999888873 2221 11 12346677777776553
No 3
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.96 E-value=1.3e-28 Score=262.92 Aligned_cols=354 Identities=16% Similarity=0.258 Sum_probs=194.5
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||||||+||+.+.|.|.++++.++.. ++.++.|+++... .++++|+|
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-~v~~~~vd~~~~~------------------------~l~~~~~v 84 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK-NITLAQIDCTENQ------------------------DLCMEHNI 84 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC-CeEEEEEECCCCH------------------------HHHHhcCC
Confidence 467 999999999999999999999999999865 4889999988764 49999999
Q ss_pred CCCcEEEEEcCCCe---EEEcCcch-------hhhhc-CCCCCCchHHHHHHHHHHHH------------HHHhhccccc
Q 008845 98 MGIPHLVILDENGK---VLSDGGVE-------IIREY-GVEGYPFTVERIKEMKEQEE------------RAKREQSLRS 154 (551)
Q Consensus 98 ~~~P~~~lid~~G~---i~~~~~~~-------~~~~~-~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~~ 154 (551)
.++||++++ ++|+ +....|.+ ++... +......+. ++++++... .......+..
T Consensus 85 ~~~Pt~~~~-~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~--~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~ 161 (504)
T 2b5e_A 85 PGFPSLKIF-KNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD--LPAYLANETFVTPVIVQSGKIDADFNATFYS 161 (504)
T ss_dssp CSSSEEEEE-ETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC--HHHHHHHSCCSSCEEEEEESCCHHHHHHHHH
T ss_pred CcCCEEEEE-eCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH--HHHHHhcCCCceEEEEEeCCCCchHHHHHHH
Confidence 999999999 4566 55444432 11111 111111111 333332211 0000000000
Q ss_pred ccccCCccee-----------------ecCCCceeeccc--c---CCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCC
Q 008845 155 VLTSHSRDFV-----------------ISSDGRKISVSD--L---EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKG 212 (551)
Q Consensus 155 ~~~~~~~d~~-----------------~~~~~~~~~~~~--~---~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~ 212 (551)
++.....++. ++..+..+.+.+ . ....+.-|+..++.|.|..+++.....+ .+.+
T Consensus 162 ~A~~~~~~~~F~~~~~~~~~~~~~i~l~~~~~~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~---~~~~ 238 (504)
T 2b5e_A 162 MANKHFNDYDFVSAENADDDFKLSIYLPSAMDEPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQY---VESG 238 (504)
T ss_dssp HHHHTTTTCEEEEEECTTSCCEEEEEETTEEEEEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHH---HHTT
T ss_pred HHHHhhcCcEEEEEHHHHHhcCCeEEecCCCCcccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHH---hcCC
Confidence 0000000000 010001111100 0 0011222333444555566665553322 2233
Q ss_pred CceEEEEeecccCHHHHHHHh--------cCCCCccccCCchhHHHHHhhcCc-CCcceEEEECCCC--Cccccc-chhh
Q 008845 213 ESFEIVLISLDDEEESFKRDL--------GSMPWLALPFKDKSREKLARYFEL-STLPTLVIIGPDG--KTLHSN-VAEA 280 (551)
Q Consensus 213 ~~~~iv~v~~d~~~~~~~~~~--------~~~~~~av~~~d~~~~~l~~~f~v-~~~P~lvi~~~~g--k~~~~~-~~~~ 280 (551)
..+.++++..+...+.+...+ .++.++.+.- .....+++.||+ ...|++++++... ++.... ....
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~--~~~~~~~~~~gl~~~~P~v~i~~~~~~~ky~~~~~~~~~ 316 (504)
T 2b5e_A 239 LPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDA--RKFGRHAGNLNMKEQFPLFAIHDMTEDLKYGLPQLSEEA 316 (504)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEH--HHHTTHHHHTTCCSCSSEEEEEETTTTEEEECCCCCHHH
T ss_pred CcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEeh--hhhHHHHHHcCCcccCCEEEEEeCCcCcccCCCCCccch
Confidence 444444433221111221111 1222222221 224568899999 3599999998632 222211 1000
Q ss_pred hhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccc-eecCCCCeeecccC-CCCEEEEEEecCCChhHHhhh
Q 008845 281 IEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDF-VVGKNGGKVPVSDL-AGKTILLYFSAHWCPPCRAFL 358 (551)
Q Consensus 281 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f-~~~~~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~ 358 (551)
.... ...-.++.+.+..+......+...+.+++...+...+- +...+++.+...-. .+|++||+|||+||++|+.+.
T Consensus 317 ~~~~-~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~ 395 (504)
T 2b5e_A 317 FDEL-SDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLA 395 (504)
T ss_dssp HHTC-CSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHH
T ss_pred hhcc-ccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHh
Confidence 0000 00112688999999998888777777666554433222 22445555432211 389999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcE
Q 008845 359 PKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 359 p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 432 (551)
|.|.++++.++....++.++.|+.+... +.. |+|+++||++++ ++|+.
T Consensus 396 p~~~~l~~~~~~~~~~v~~~~vd~~~~~------------------------~~~-~~v~~~Pt~~~~-~~G~~ 443 (504)
T 2b5e_A 396 PTYQELADTYANATSDVLIAKLDHTEND------------------------VRG-VVIEGYPTIVLY-PGGKK 443 (504)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEEEGGGCC------------------------CSS-CCCSSSSEEEEE-CCTTS
T ss_pred HHHHHHHHHhhccCCcEEEEEecCCccc------------------------ccc-CCceecCeEEEE-eCCce
Confidence 9999999998732234666666554321 233 899999999999 77865
No 4
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.94 E-value=3.1e-26 Score=257.25 Aligned_cols=174 Identities=15% Similarity=0.216 Sum_probs=126.5
Q ss_pred CCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcCc
Q 008845 178 EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFEL 257 (551)
Q Consensus 178 ~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~v 257 (551)
.++.+++.|+++||++|+.+.|.+.+++++++++ +.|+.+|.+. ...+++.|||
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-----v~~~~vd~~~---------------------~~~~~~~~~v 507 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-----LKVGTLDCTI---------------------HEGLCNMYNI 507 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-----CEEEEEETTT---------------------CHHHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-----eEEEEEeCCC---------------------CHHHHHHcCC
Confidence 6789999999999999999999999999998754 4555555543 4568899999
Q ss_pred CCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCcccee-cCCCCeeeccc
Q 008845 258 STLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVV-GKNGGKVPVSD 336 (551)
Q Consensus 258 ~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~~g~~v~l~~ 336 (551)
+++|++++++. |+..... | ..+.+.+.+++..... +.+ ..+ ..+.+.+....
T Consensus 508 ~~~Pt~~~~~~-g~~~~~~--------g----~~~~~~l~~fi~~~~~----~~v----------~~l~~~~f~~~v~~~ 560 (780)
T 3apo_A 508 QAYPTTVVFNQ-SSIHEYE--------G----HHSAEQILEFIEDLRN----PSV----------VSLTPSTFNELVKQR 560 (780)
T ss_dssp CSSSEEEEEET-TEEEEEC--------S----CSCHHHHHHHHHHHHS----CSE----------EECCHHHHHHHTTTC
T ss_pred CcCCeEEEEcC-Cceeeec--------C----cccHHHHHHHHHhhcc----cce----------eecCcccHHHHhhcc
Confidence 99999999953 4431111 1 3467788887765543 100 111 11112222222
Q ss_pred CCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008845 337 LAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 416 (551)
Q Consensus 337 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 416 (551)
-.++.++|.||+|||++|+.+.|.+.++++.++++ +.++.++.+... .+++.|+
T Consensus 561 ~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~ 614 (780)
T 3apo_A 561 KHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL---INVGSVDCGQYH-----------------------SFCTQEN 614 (780)
T ss_dssp CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTTH-----------------------HHHHHTT
T ss_pred CCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC---eEEEEEECcchH-----------------------HHHHHcC
Confidence 23578999999999999999999999999999864 777777766443 5889999
Q ss_pred CCCcceEEEECCCC
Q 008845 417 VSGIPMLVAIGPSG 430 (551)
Q Consensus 417 v~~~P~~~lid~~G 430 (551)
|+++|+++++.+++
T Consensus 615 v~~~Pti~~~~~~~ 628 (780)
T 3apo_A 615 VQRYPEIRFYPQKS 628 (780)
T ss_dssp CCSSSEEEEECCCS
T ss_pred CCCCCeEEEEcCCC
Confidence 99999999996644
No 5
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.89 E-value=1.2e-21 Score=199.95 Aligned_cols=291 Identities=18% Similarity=0.224 Sum_probs=190.1
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
++|-|+..-+..+ ...+.++++.+. ++.+.. +. + ..+++.+++.. |
T Consensus 38 ~vvgff~~~~~~~---~~~f~~~A~~~~---~~~F~~--t~-~------------------------~~v~~~~~v~~-~ 83 (361)
T 3uem_A 38 AVIGFFKDVESDS---AKQFLQAAEAID---DIPFGI--TS-N------------------------SDVFSKYQLDK-D 83 (361)
T ss_dssp EEEEECSCTTSHH---HHHHHHHHHHCS---SSCEEE--EC-C------------------------HHHHHHTTCSS-S
T ss_pred EEEEEEcCCCchH---HHHHHHHHhcCC---CceEEE--EC-c------------------------HHHHHHhCCCC-C
Confidence 6677776655544 457788887773 233332 22 2 24888999988 8
Q ss_pred EEEEEcC--CCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCcee-eccccC
Q 008845 102 HLVILDE--NGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKI-SVSDLE 178 (551)
Q Consensus 102 ~~~lid~--~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~ 178 (551)
+++++.+ ++.+... | +++.+.|.+++... ..+.+...+.+.. .+....
T Consensus 84 ~i~lfk~f~~~~~~~~---------g----~~~~~~i~~fi~~~----------------~~p~v~~~~~~~~~~~~~~~ 134 (361)
T 3uem_A 84 GVVLFKKFDEGRNNFE---------G----EVTKENLLDFIKHN----------------QLPLVIEFTEQTAPKIFGGE 134 (361)
T ss_dssp EEEEEESSTTSEEECC---------S----CCCHHHHHHHHHHH----------------SSCSEEECSTTTHHHHHSCS
T ss_pred eEEEEEecCCCccccC---------C----cCCHHHHHHHHHHc----------------CCCcceecCcccHHHHhcCC
Confidence 8888854 3444321 1 24566666666432 2233322222221 122223
Q ss_pred CcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcCcC
Q 008845 179 GKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELS 258 (551)
Q Consensus 179 gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~v~ 258 (551)
.+.++++|+++||+.|..+.|.+.+++++++++ +.|+.+|.+. ...+.++++|||+
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-----i~f~~vd~~~-------------------~~~~~~~~~fgi~ 190 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-----ILFIFIDSDH-------------------TDNQRILEFFGLK 190 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-----CEEEEECTTS-------------------GGGHHHHHHTTCC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-----eEEEEecCCh-------------------HHHHHHHHHcCCC
Confidence 457789999999999999999999999999876 6677666651 0157889999998
Q ss_pred C--cceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCC-cc-ceecCCCCeeec
Q 008845 259 T--LPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGD-LD-FVVGKNGGKVPV 334 (551)
Q Consensus 259 ~--~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-f~~~~~g~~v~l 334 (551)
. +|++++++.++.. ..|......++.+.+.+++.....+...+.+++...+.. .+ -+...+++.+..
T Consensus 191 ~~~~P~~~~~~~~~~~---------~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~ 261 (361)
T 3uem_A 191 KEECPAVRLITLEEEM---------TKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFED 261 (361)
T ss_dssp TTTCSEEEEEECC--C---------CEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHH
T ss_pred ccCCccEEEEEcCCcc---------cccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhh
Confidence 7 9999999764321 111111225789999999999888777777776655433 11 122333333322
Q ss_pred ccC-CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHH
Q 008845 335 SDL-AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSR 413 (551)
Q Consensus 335 ~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~ 413 (551)
.-+ .+|+++|+|||+||++|+++.|.|.+++++++++ .++.++.|+.+... ++
T Consensus 262 ~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~-~~v~~~~vd~~~~~-------------------------~~ 315 (361)
T 3uem_A 262 VAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH-ENIVIAKMDSTANE-------------------------VE 315 (361)
T ss_dssp HHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTTCB-------------------------CS
T ss_pred hcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC-CcEEEEEEECCccc-------------------------hh
Confidence 111 4899999999999999999999999999999764 23555555544331 56
Q ss_pred hcCCCCcceEEEECCC-CcEEE
Q 008845 414 KFKVSGIPMLVAIGPS-GRTIT 434 (551)
Q Consensus 414 ~~~v~~~P~~~lid~~-G~i~~ 434 (551)
.|+|+++||+++++++ |+.+.
T Consensus 316 ~~~v~~~Pt~~~~~~~~~~~~~ 337 (361)
T 3uem_A 316 AVKVHSFPTLKFFPASADRTVI 337 (361)
T ss_dssp SCCCCSSSEEEEECSSSSCCCE
T ss_pred hcCCcccCeEEEEECCCCccee
Confidence 8999999999999655 44333
No 6
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.89 E-value=2.3e-22 Score=193.06 Aligned_cols=198 Identities=20% Similarity=0.326 Sum_probs=142.0
Q ss_pred CCceeeccccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchh
Q 008845 168 DGRKISVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKS 247 (551)
Q Consensus 168 ~~~~~~~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~ 247 (551)
+++.+.....+++.++++|+++||++|+.+.|.+.++++.+++++.++.++.++++.
T Consensus 21 ~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~----------------------- 77 (241)
T 3idv_A 21 NDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS----------------------- 77 (241)
T ss_dssp CTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT-----------------------
T ss_pred cccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC-----------------------
Confidence 333333333478999999999999999999999999999998776555555555544
Q ss_pred HHHHHhhcCcCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecC
Q 008845 248 REKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGK 327 (551)
Q Consensus 248 ~~~l~~~f~v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~ 327 (551)
...+++.|+|+++||+++++ +|+.+... | ..+.+.+.++........ ....+..+...
T Consensus 78 ~~~l~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~~i~~~~~~~---------~~~~~~~~~~~ 135 (241)
T 3idv_A 78 ASVLASRFDVSGYPTIKILK-KGQAVDYE--------G----SRTQEEIVAKVREVSQPD---------WTPPPEVTLVL 135 (241)
T ss_dssp CHHHHHHTTCCSSSEEEEEE-TTEEEECC--------S----CSCHHHHHHHHHHHHSTT---------CCCCCCSSEEC
T ss_pred CHHHHHhcCCCcCCEEEEEc-CCCccccc--------C----cccHHHHHHHHhhccCcc---------cccccccceec
Confidence 45789999999999999995 44433111 1 235667766665332211 11122233333
Q ss_pred CCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchh
Q 008845 328 NGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDAR 407 (551)
Q Consensus 328 ~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~ 407 (551)
+.+.+...-..+++++|+||++||++|+.+.|.+.+++++++++..++.++.|+++..+
T Consensus 136 ~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~--------------------- 194 (241)
T 3idv_A 136 TKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET--------------------- 194 (241)
T ss_dssp CTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH---------------------
T ss_pred cHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH---------------------
Confidence 33333221123789999999999999999999999999999876556888888887664
Q ss_pred hHHHHHhcCCCCcceEEEECCCCcEEE
Q 008845 408 KASLSRKFKVSGIPMLVAIGPSGRTIT 434 (551)
Q Consensus 408 ~~~l~~~~~v~~~P~~~lid~~G~i~~ 434 (551)
.+++.|+|+++||+++++ +|+.+.
T Consensus 195 --~l~~~~~v~~~Pt~~~~~-~g~~~~ 218 (241)
T 3idv_A 195 --DLAKRFDVSGYPTLKIFR-KGRPYD 218 (241)
T ss_dssp --HHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred --HHHHHcCCcccCEEEEEE-CCeEEE
Confidence 589999999999999995 677665
No 7
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.88 E-value=7.3e-22 Score=189.54 Aligned_cols=202 Identities=19% Similarity=0.320 Sum_probs=140.3
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhc
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 95 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 95 (551)
.+|+ ++|+|||+||++|+.++|.|.++++.++..+ ++.++.|+++... .+++.|
T Consensus 30 ~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~------------------------~l~~~~ 85 (241)
T 3idv_A 30 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS------------------------VLASRF 85 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH------------------------HHHHHT
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH------------------------HHHHhc
Confidence 3688 9999999999999999999999999998653 4788888887664 489999
Q ss_pred CCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCceeecc
Q 008845 96 KVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVS 175 (551)
Q Consensus 96 ~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 175 (551)
+|.++|+++++ ++|+++... |. .+.+.+.+++..... .. . ......+...+++.+...
T Consensus 86 ~v~~~Pt~~~~-~~g~~~~~~--------g~----~~~~~l~~~i~~~~~----~~---~--~~~~~~~~~~~~~~~~~~ 143 (241)
T 3idv_A 86 DVSGYPTIKIL-KKGQAVDYE--------GS----RTQEEIVAKVREVSQ----PD---W--TPPPEVTLVLTKENFDEV 143 (241)
T ss_dssp TCCSSSEEEEE-ETTEEEECC--------SC----SCHHHHHHHHHHHHS----TT---C--CCCCCSSEECCTTTHHHH
T ss_pred CCCcCCEEEEE-cCCCccccc--------Cc----ccHHHHHHHHhhccC----cc---c--ccccccceeccHHHHHHh
Confidence 99999999999 467766432 11 244555555533210 00 0 001112222222222222
Q ss_pred ccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhc
Q 008845 176 DLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYF 255 (551)
Q Consensus 176 ~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f 255 (551)
...++.++++|+++||++|+.+.|.+.+++..+..++.++.++.++++. ...+++.|
T Consensus 144 ~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~ 200 (241)
T 3idv_A 144 VNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA-----------------------ETDLAKRF 200 (241)
T ss_dssp HHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT-----------------------CHHHHHHT
T ss_pred hccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC-----------------------CHHHHHHc
Confidence 2356789999999999999999999999999998765555555565554 34788999
Q ss_pred CcCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHH
Q 008845 256 ELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAE 301 (551)
Q Consensus 256 ~v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 301 (551)
+|.++||+++++. |+.+.. .| +.+.+.+.+++.
T Consensus 201 ~v~~~Pt~~~~~~-g~~~~~--------~g----~~~~~~l~~~l~ 233 (241)
T 3idv_A 201 DVSGYPTLKIFRK-GRPYDY--------NG----PREKYGIVDYMI 233 (241)
T ss_dssp TCCSSSEEEEEET-TEEEEC--------CS----CCSHHHHHHHHH
T ss_pred CCcccCEEEEEEC-CeEEEe--------cC----CCCHHHHHHHHH
Confidence 9999999999964 443221 11 346677766665
No 8
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.87 E-value=9.5e-22 Score=174.75 Aligned_cols=141 Identities=19% Similarity=0.339 Sum_probs=120.3
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 397 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 397 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|+.|++|.+.+.+++++++++
T Consensus 8 ~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~ 85 (152)
T 2lrn_A 8 VAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK--GFTIYGVSTDRREEDWKKAIEEDK 85 (152)
T ss_dssp ECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT--TEEEEEEECCSCHHHHHHHHHHHT
T ss_pred cCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHHHhC
Confidence 3588988 9999999999999999999999999999999999999999999865 699999999988899999998776
Q ss_pred CcccccCchh---hHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCCccc
Q 008845 398 WLALPFGDAR---KASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPENV 474 (551)
Q Consensus 398 ~~~~~~~~d~---~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~~~~ 474 (551)
+.+|+..|. ...+++.|+|.++|+++|||++|+++.+.. .. ++|.+.|+++++...+..
T Consensus 86 -~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~--------------~~---~~l~~~l~~l~~~~~~~~ 147 (152)
T 2lrn_A 86 -SYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKEL--------------RG---DDLYNTVEKFVNGAKEGH 147 (152)
T ss_dssp -CCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECC--------------CT---THHHHHHHHHHTSSSSCC
T ss_pred -CCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeC--------------CH---HHHHHHHHHHHhhccccc
Confidence 567777776 678999999999999999999999999842 11 457778888887766666
Q ss_pred ccCCc
Q 008845 475 KHALH 479 (551)
Q Consensus 475 ~~~~~ 479 (551)
.|..|
T Consensus 148 ~~~~~ 152 (152)
T 2lrn_A 148 HHHHH 152 (152)
T ss_dssp SSSCC
T ss_pred cccCC
Confidence 55544
No 9
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.87 E-value=1.3e-21 Score=172.24 Aligned_cols=133 Identities=41% Similarity=0.747 Sum_probs=117.1
Q ss_pred CCcc-cee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLD-FVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~-f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+ |.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ .++.|++|++|.+.+.+++|++++
T Consensus 6 ~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~ 84 (144)
T 1i5g_A 6 FFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAKM 84 (144)
T ss_dssp SCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTC
T ss_pred hCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhC
Confidence 3477 887 9999999999999999999999999999999999999999999842 259999999999999999999999
Q ss_pred CCcccccCc-hhhHHHHHhcCCCCcceEEEEC-CCCcEEEcccchhhhhcC-CCCCCCC
Q 008845 397 PWLALPFGD-ARKASLSRKFKVSGIPMLVAIG-PSGRTITKEARDMIAVHG-AEAYPFT 452 (551)
Q Consensus 397 ~~~~~~~~~-d~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~~g-~~~~p~~ 452 (551)
+|..+|+.. +....+++.|+|.++|+++||| ++|+++.+.++..+.... ...|||.
T Consensus 85 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 85 PWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp SSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred CccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCCC
Confidence 999999886 6678899999999999999999 999999998887765543 3445553
No 10
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.87 E-value=1.2e-21 Score=176.76 Aligned_cols=131 Identities=32% Similarity=0.790 Sum_probs=115.2
Q ss_pred ccc-ee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCC
Q 008845 321 LDF-VV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPW 398 (551)
Q Consensus 321 ~~f-~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~ 398 (551)
|+| .+ +.+| .+++++++||+|||+||++||++|+.++|.|.++++++++. .++.||+|++|.+.+.+++|+++++|
T Consensus 29 P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~ 106 (165)
T 3s9f_A 29 GEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAKMPW 106 (165)
T ss_dssp HHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSS
T ss_pred CcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHhCCC
Confidence 667 56 8899 99999999999999999999999999999999999999862 26999999999999999999999999
Q ss_pred cccccCchhh-HHHHHhcCCCCcceEEEECCC-CcEEEcccchhhh-hcCCCCCCCCH
Q 008845 399 LALPFGDARK-ASLSRKFKVSGIPMLVAIGPS-GRTITKEARDMIA-VHGAEAYPFTE 453 (551)
Q Consensus 399 ~~~~~~~d~~-~~l~~~~~v~~~P~~~lid~~-G~i~~~~~~~~~~-~~g~~~~p~~~ 453 (551)
..+|+..+.. ..+++.|+|.++|+++|||++ |+|+++.++..+. ...+..|||.+
T Consensus 107 ~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 107 LSIPFANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp EECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred cccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 9999887654 789999999999999999998 9999998876643 34566677754
No 11
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.86 E-value=2.7e-21 Score=169.64 Aligned_cols=119 Identities=17% Similarity=0.266 Sum_probs=105.2
Q ss_pred hccCCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHH---HHHHHhhcCCCeEEEEEeCCCChHHHHH
Q 008845 316 LVSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLID---AYKKIKERNESLEVVFISSDRDQTSFDE 391 (551)
Q Consensus 316 ~~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~vv~vs~d~~~~~~~~ 391 (551)
.....|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+ +++++++. ++.|++|++|.+.+.+++
T Consensus 7 ~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~--~~~vi~i~~d~~~~~~~~ 84 (142)
T 3eur_A 7 LGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK--KLKVLSIYPDEELDEWKK 84 (142)
T ss_dssp TTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT--SEEEEEEECSSCHHHHHH
T ss_pred CCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC--CeEEEEEEcCCCHHHHHH
Confidence 3345689988 99999999999999999999999999999999999999 99999865 699999999999899999
Q ss_pred HHhcCCCcccccCchhhHH--HHHhcCCCCcceEEEECCCCcEEEccc
Q 008845 392 FFKGMPWLALPFGDARKAS--LSRKFKVSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 392 ~~~~~~~~~~~~~~d~~~~--l~~~~~v~~~P~~~lid~~G~i~~~~~ 437 (551)
++++++ +.++...|.... +.+.|+|.++|+++|||++|+|++++.
T Consensus 85 ~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 131 (142)
T 3eur_A 85 HRNDFA-KEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDA 131 (142)
T ss_dssp HGGGSC-TTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEE
T ss_pred HHHhcc-cccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCC
Confidence 999988 356666565543 789999999999999999999999843
No 12
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.86 E-value=3.6e-21 Score=168.79 Aligned_cols=115 Identities=19% Similarity=0.324 Sum_probs=105.3
Q ss_pred cCCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHH---HHHHHhhcCCCeEEEEEeCCCChHHHHHHH
Q 008845 318 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLID---AYKKIKERNESLEVVFISSDRDQTSFDEFF 393 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 393 (551)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+ ++++++++ ++.|++|++|.+.+.+++++
T Consensus 5 ~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~ 82 (142)
T 3ewl_A 5 MKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG--TLRVLAIYPDENREEWATKA 82 (142)
T ss_dssp SBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT--SEEEEEEECSSCHHHHHHHH
T ss_pred CcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC--CeEEEEEEecCCHHHHHHHH
Confidence 44689988 99999999999999999999999999999999999998 89999865 69999999999999999999
Q ss_pred hcCCCcccccCchhhHHHHH--hcCCCCcceEEEECCCCcEEEc
Q 008845 394 KGMPWLALPFGDARKASLSR--KFKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 394 ~~~~~~~~~~~~d~~~~l~~--~~~v~~~P~~~lid~~G~i~~~ 435 (551)
++++ +.+|...|....+.. .|+|.++|+++|||++|+++++
T Consensus 83 ~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 83 VYMP-QGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp TTSC-TTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC
T ss_pred HHcC-CCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec
Confidence 9988 578888888887876 9999999999999999999985
No 13
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.86 E-value=3.8e-21 Score=169.61 Aligned_cols=133 Identities=38% Similarity=0.764 Sum_probs=116.0
Q ss_pred cCCcc-cee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhc
Q 008845 318 SGDLD-FVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKG 395 (551)
Q Consensus 318 ~~~~~-f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 395 (551)
...|+ |.+ +.+| .+++++++||++||+||++||++|+.++|.|.++++++++. .+++|++|++|.+.+.+++|+++
T Consensus 6 ~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~ 83 (146)
T 1o8x_A 6 KYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDEEEDGFAGYFAK 83 (146)
T ss_dssp GTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTT
T ss_pred hhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCCCHHHHHHHHHH
Confidence 34577 877 9999 99999999999999999999999999999999999999842 26999999999999999999999
Q ss_pred CCCcccccCc-hhhHHHHHhcCCCCcceEEEEC-CCCcEEEcccchhhhhcC-CCCCCCC
Q 008845 396 MPWLALPFGD-ARKASLSRKFKVSGIPMLVAIG-PSGRTITKEARDMIAVHG-AEAYPFT 452 (551)
Q Consensus 396 ~~~~~~~~~~-d~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~~g-~~~~p~~ 452 (551)
++|..+|+.. +....+++.|+|.++|+++||| ++|+++++.++..+.... ...+||.
T Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (146)
T 1o8x_A 84 MPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWK 143 (146)
T ss_dssp CSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCC
T ss_pred CCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCC
Confidence 9999999876 6677899999999999999999 999999998877665443 3455554
No 14
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.85 E-value=9.6e-21 Score=167.93 Aligned_cols=136 Identities=24% Similarity=0.501 Sum_probs=115.8
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCC
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPW 398 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~ 398 (551)
.|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.++.|++|.+.+.+++|+++++
T Consensus 6 ~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~v~~d~~~~~~~~~~~~~~- 82 (151)
T 2f9s_A 6 APNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ--GVEIVAVNVGESKIAVHNFMKSYG- 82 (151)
T ss_dssp CCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEEESCCHHHHHHHHHHHT-
T ss_pred CCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHHHHHHcC-
Confidence 478988 9999999999999999999999999999999999999999999865 599999999988889999999887
Q ss_pred cccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCCc
Q 008845 399 LALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPE 472 (551)
Q Consensus 399 ~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~~ 472 (551)
+.+|+..|....+++.|+|.++|+++|+|++|+++.+..+. . ..++|.+.|++++.....
T Consensus 83 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~-----------~---~~~~l~~~l~~ll~~~~~ 142 (151)
T 2f9s_A 83 VNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGT-----------M---TESMIHDYMNLIKPGETS 142 (151)
T ss_dssp CCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESC-----------C---CHHHHHHHHHHHSCC---
T ss_pred CCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCC-----------C---CHHHHHHHHHHHHhhhhc
Confidence 46888888888999999999999999999999999874321 1 235567777777765443
No 15
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.85 E-value=1.5e-20 Score=165.15 Aligned_cols=132 Identities=38% Similarity=0.770 Sum_probs=114.3
Q ss_pred cCCccc-ee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhc
Q 008845 318 SGDLDF-VV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKG 395 (551)
Q Consensus 318 ~~~~~f-~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 395 (551)
...|+| .+ +.+| .+++++++||++||+||++||++|+.++|.|.++++++++. .++.|++|++|.+.+.+++++++
T Consensus 6 ~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~ 83 (144)
T 1o73_A 6 KYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYGK 83 (144)
T ss_dssp GTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTT
T ss_pred hhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHh
Confidence 345787 77 8999 99999999999999999999999999999999999999732 26999999999988999999999
Q ss_pred CCCcccccCc-hhhHHHHHhcCCCCcceEEEEC-CCCcEEEcccchhhhhcC-CCCCCC
Q 008845 396 MPWLALPFGD-ARKASLSRKFKVSGIPMLVAIG-PSGRTITKEARDMIAVHG-AEAYPF 451 (551)
Q Consensus 396 ~~~~~~~~~~-d~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~~g-~~~~p~ 451 (551)
++|..+|+.. +....+++.|+|.++|+++|+| ++|+++++.++..+.... ...|||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W 142 (144)
T 1o73_A 84 MPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPW 142 (144)
T ss_dssp CSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTC
T ss_pred CCceEeeccchhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCC
Confidence 9999999876 5677899999999999999999 899999998876655433 344444
No 16
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.85 E-value=7.5e-21 Score=170.73 Aligned_cols=137 Identities=20% Similarity=0.254 Sum_probs=118.6
Q ss_pred CCcccee-cCCCCeeecccCCCCE-EEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhc
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKT-ILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKG 395 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~-vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 395 (551)
..|+|.+ +.+|+.+++++++||+ +||+|| ++||++|+.++|.|.+++++++++ +++||+|++| +.+.+++|+++
T Consensus 7 ~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d-~~~~~~~~~~~ 83 (161)
T 3drn_A 7 KAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY--DVVVIGVSSD-DINSHKRFKEK 83 (161)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT--CEEEEEEESC-CHHHHHHHHHH
T ss_pred cCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEeCC-CHHHHHHHHHH
Confidence 4589988 9999999999999997 999999 999999999999999999999875 6999999998 57899999999
Q ss_pred CCCcccccCchhhHHHHHhcCCCC----cceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 396 MPWLALPFGDARKASLSRKFKVSG----IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 396 ~~~~~~~~~~d~~~~l~~~~~v~~----~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
++ +.+|+..|....+++.|++.+ +|+++|||++|+|+.+..+.. .....++++.+.|+++...
T Consensus 84 ~~-~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~----------~~~~~~~~il~~l~~l~~~ 150 (161)
T 3drn_A 84 YK-LPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQM----------NPANHVNEALKALKQIKEE 150 (161)
T ss_dssp TT-CCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSS----------CTTHHHHHHHHHHHHHHHH
T ss_pred hC-CCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCC----------CCCcCHHHHHHHHHHhhhh
Confidence 88 568888888889999999999 999999999999998844311 2356677788888776543
No 17
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.84 E-value=7.3e-21 Score=167.11 Aligned_cols=116 Identities=21% Similarity=0.167 Sum_probs=96.4
Q ss_pred CCccceecCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCC
Q 008845 319 GDLDFVVGKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPW 398 (551)
Q Consensus 319 ~~~~f~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~ 398 (551)
..|+|.++.+|+.+++++++||++||+||++||++|+.++|.|.+++++|+++ +++|++|++|.+.+.+++++++++
T Consensus 12 ~~P~f~l~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~- 88 (143)
T 4fo5_A 12 LAPRIEFLGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTETVKIDK- 88 (143)
T ss_dssp BCCCCCC-----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHHHHHHT-
T ss_pred cCCceEEcCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHHHHHhC-
Confidence 35889888899999999999999999999999999999999999999999765 699999999999889999998766
Q ss_pred ccc-ccCch---hhHHHHHhcCCCCcceEEEECCCCcEEEccc
Q 008845 399 LAL-PFGDA---RKASLSRKFKVSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 399 ~~~-~~~~d---~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~ 437 (551)
+.+ +...| ....+++.|+|.++|+++|||++|+|+.++.
T Consensus 89 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 131 (143)
T 4fo5_A 89 LDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAANV 131 (143)
T ss_dssp CCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEESC
T ss_pred CCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEccC
Confidence 333 33333 3467999999999999999999999999843
No 18
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=2e-20 Score=165.73 Aligned_cols=115 Identities=21% Similarity=0.325 Sum_probs=103.6
Q ss_pred CCcccee-cCCCCeeecc--cCCCCEEEEEEecCCChh--HHhhhHHHHHHHHHH-hhcCCCeEEEEEeCCCChHHHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVS--DLAGKTILLYFSAHWCPP--CRAFLPKLIDAYKKI-KERNESLEVVFISSDRDQTSFDEF 392 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~--~~~gk~vll~F~a~wC~~--C~~~~p~l~~l~~~~-~~~~~~~~vv~vs~d~~~~~~~~~ 392 (551)
..|+|.+ +.+|+.++++ +++||++||+||++||++ |+.++|.|.++++++ +++ ++.+++|++|.+++.+++|
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~~~~~~ 87 (150)
T 3fw2_A 10 YAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK--YIGMLGISLDVDKQQWKDA 87 (150)
T ss_dssp BCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS--SEEEEEEECCSCHHHHHHH
T ss_pred cCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC--CeEEEEEEcCCCHHHHHHH
Confidence 4589988 9999999999 999999999999999999 999999999999999 554 6999999999998999999
Q ss_pred HhcCCCcccccCchh---hHHHHHhcCCCCcceEEEECCCCcEEEcc
Q 008845 393 FKGMPWLALPFGDAR---KASLSRKFKVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 393 ~~~~~~~~~~~~~d~---~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 436 (551)
+++++ +.+|...|. ...+++.|+|.++|+++|||++|+++.+.
T Consensus 88 ~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 88 IKRDT-LDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp HHHTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHhC-CCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 99887 456665554 67899999999999999999999999984
No 19
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.84 E-value=2.5e-20 Score=165.34 Aligned_cols=137 Identities=26% Similarity=0.455 Sum_probs=118.0
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 397 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 397 (551)
..|+|.+ + +|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.++.|++|.+.+.+.+++++++
T Consensus 8 ~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~ 84 (152)
T 3gl3_A 8 KAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK--GFQVVAVNLDAKTGDAMKFLAQVP 84 (152)
T ss_dssp BCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSHHHHHHHHHHSC
T ss_pred cCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC--CeEEEEEECCCCHHHHHHHHHHcC
Confidence 3588988 7 99999999999999999999999999999999999999999876 599999999998899999999988
Q ss_pred CcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 398 WLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 398 ~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
+.+++..|....+++.|++.++|+++|||++|+++.+.. | ....+.++|++.|++++.+.+
T Consensus 85 -~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-------g-----~~~~~~~~l~~~i~~~~~~~~ 145 (152)
T 3gl3_A 85 -AEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHV-------G-----FRPADKEALEQQILAALGGNE 145 (152)
T ss_dssp -CCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEE-------S-----CCTTTHHHHHHHHHHHTC---
T ss_pred -CCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEc-------c-----CCCcCHHHHHHHHHHHHcccc
Confidence 578888888889999999999999999999999998843 2 233455677788877766544
No 20
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.84 E-value=1.5e-20 Score=167.10 Aligned_cols=144 Identities=24% Similarity=0.459 Sum_probs=114.4
Q ss_pred cCCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCC-hHHHHHHHhc
Q 008845 318 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRD-QTSFDEFFKG 395 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~-~~~~~~~~~~ 395 (551)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.++++++++. ++.++.|++|.+ .+.+++|++.
T Consensus 6 ~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~ 83 (154)
T 3kcm_A 6 NPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK--PFRMLCVSIDEGGKVAVEEFFRK 83 (154)
T ss_dssp SBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS--SEEEEEEECCTTHHHHHHHHHHH
T ss_pred CCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEEcCCcchHHHHHHHHH
Confidence 34589988 9999999999999999999999999999999999999999999864 599999999987 7788899988
Q ss_pred CCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCCcccc
Q 008845 396 MPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPENVK 475 (551)
Q Consensus 396 ~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~~~~~ 475 (551)
++ +.+|+..|....+++.|++.++|+++|||++|+++.+..+. . ++ ..+++.+.|+++....+...+
T Consensus 84 ~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-------~--~~---~~~~l~~~l~~l~~~~~~~~~ 150 (154)
T 3kcm_A 84 TG-FTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGA-------M--EW---DHPEVIAFLNNELSKAREGHH 150 (154)
T ss_dssp HC-CCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESC-------C--CT---TSHHHHHHHHTC---------
T ss_pred cC-CCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCC-------C--cc---ccHHHHHHHHHHHHHhhhccc
Confidence 87 56888888888999999999999999999999999874321 1 11 225566777776665554443
Q ss_pred c
Q 008845 476 H 476 (551)
Q Consensus 476 ~ 476 (551)
+
T Consensus 151 ~ 151 (154)
T 3kcm_A 151 H 151 (154)
T ss_dssp -
T ss_pred c
Confidence 3
No 21
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.83 E-value=2.5e-20 Score=166.52 Aligned_cols=135 Identities=16% Similarity=0.282 Sum_probs=112.1
Q ss_pred CCcccee-c--CCCCeeecccCCCCEEEEEEecCCChhHHhh-hHHHHHHHHHHhhcCCCeEEEEEeCC------CChHH
Q 008845 319 GDLDFVV-G--KNGGKVPVSDLAGKTILLYFSAHWCPPCRAF-LPKLIDAYKKIKERNESLEVVFISSD------RDQTS 388 (551)
Q Consensus 319 ~~~~f~~-~--~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~vv~vs~d------~~~~~ 388 (551)
..|+|.+ + .+|+.+++++++||++||+||++||++|+.+ +|.|.+++++++++ ++.++.|++| .+.+.
T Consensus 5 ~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~ 82 (158)
T 3eyt_A 5 KAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED--KVAVLGLHTVFEHHEAMTPIS 82 (158)
T ss_dssp ECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHH
T ss_pred cCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC--CEEEEEEEecccccccCCHHH
Confidence 3588887 6 3889999999999999999999999999996 99999999999754 6999999984 46788
Q ss_pred HHHHHhcCCCcccccCchhhH-----HHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHH
Q 008845 389 FDEFFKGMPWLALPFGDARKA-----SLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQY 463 (551)
Q Consensus 389 ~~~~~~~~~~~~~~~~~d~~~-----~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l 463 (551)
+++|+++++ +.+|+..|... .+++.|+|.++|+++|||++|+++.+..+. .. .++|.+.|
T Consensus 83 ~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~~~i 147 (158)
T 3eyt_A 83 LKAFLHEYR-IKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGD-----------VS---ELLLGAEI 147 (158)
T ss_dssp HHHHHHHTT-CCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESC-----------CC---HHHHHHHH
T ss_pred HHHHHHHcC-CCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCC-----------CC---HHHHHHHH
Confidence 999999887 56777777665 799999999999999999999999874321 22 24567777
Q ss_pred HHHhccC
Q 008845 464 NEMAKGW 470 (551)
Q Consensus 464 ~~~~~~~ 470 (551)
+++++..
T Consensus 148 ~~ll~~~ 154 (158)
T 3eyt_A 148 ATLLGEA 154 (158)
T ss_dssp HHHHTSC
T ss_pred HHHhccC
Confidence 7777643
No 22
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.83 E-value=1.7e-20 Score=167.95 Aligned_cols=136 Identities=16% Similarity=0.258 Sum_probs=114.1
Q ss_pred ccCCcccee-c-CCCCeeecccCCCCEEEEEEecCCChhHHhh-hHHHHHHHHHHhhcCCCeEEEEEeCC------CChH
Q 008845 317 VSGDLDFVV-G-KNGGKVPVSDLAGKTILLYFSAHWCPPCRAF-LPKLIDAYKKIKERNESLEVVFISSD------RDQT 387 (551)
Q Consensus 317 ~~~~~~f~~-~-~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~vv~vs~d------~~~~ 387 (551)
....|+|.+ + .+|+.+++++++||++||+||++||++|+.+ +|.|.+++++++++ ++.|+.|++| .+.+
T Consensus 6 g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~ 83 (160)
T 3lor_A 6 NAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES--QVQVIGLHSVFEHHDVMTPE 83 (160)
T ss_dssp TCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHH
T ss_pred CCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC--CcEEEEEeccccccccCCHH
Confidence 345678877 6 7999999999999999999999999999995 99999999999865 6999999984 5778
Q ss_pred HHHHHHhcCCCcccccCchhhHH------HHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHH
Q 008845 388 SFDEFFKGMPWLALPFGDARKAS------LSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDG 461 (551)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~d~~~~------l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~ 461 (551)
.+++|+++++ +.+|+..|.... +++.|+|.++|+++|||++|+++.+..+. .. .++|.+
T Consensus 84 ~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~~ 148 (160)
T 3lor_A 84 ALKVFIDEFG-IKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQ-----------VD---DFVLGL 148 (160)
T ss_dssp HHHHHHHHTT-CCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESC-----------CC---HHHHHH
T ss_pred HHHHHHHHcC-CCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCc-----------CC---HHHHHH
Confidence 9999999888 567877777766 99999999999999999999999984321 12 245777
Q ss_pred HHHHHhcc
Q 008845 462 QYNEMAKG 469 (551)
Q Consensus 462 ~l~~~~~~ 469 (551)
.|++++++
T Consensus 149 ~i~~ll~~ 156 (160)
T 3lor_A 149 LLGSLLSE 156 (160)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhc
Confidence 77777764
No 23
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.83 E-value=3.5e-20 Score=164.63 Aligned_cols=114 Identities=18% Similarity=0.273 Sum_probs=100.8
Q ss_pred cCCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 318 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ +++|+.|++|...+.++++...+
T Consensus 13 ~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d~~~~~~~~~~~~~ 90 (152)
T 2lrt_A 13 ASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ--GFEIYQISLDGDEHFWKTSADNL 90 (152)
T ss_dssp TCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECSCCHHHHHHHHTTC
T ss_pred CCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHhCC
Confidence 34589988 9999999999999999999999999999999999999999999876 69999999999888888888765
Q ss_pred CCcccccCchhhH---HHHHhcCCCCcceEEEECCCCcEEEcc
Q 008845 397 PWLALPFGDARKA---SLSRKFKVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 397 ~~~~~~~~~d~~~---~l~~~~~v~~~P~~~lid~~G~i~~~~ 436 (551)
+ +|+..|... .+.+.|++.++|+++|||++|+|+.+.
T Consensus 91 ~---~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 91 P---WVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp S---SEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred C---ceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEec
Confidence 4 455555554 499999999999999999999999984
No 24
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.83 E-value=2.9e-20 Score=164.85 Aligned_cols=135 Identities=20% Similarity=0.332 Sum_probs=107.2
Q ss_pred CccceecCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCc
Q 008845 320 DLDFVVGKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWL 399 (551)
Q Consensus 320 ~~~f~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~ 399 (551)
.++|....+|+.+++++++||++||+||++||++|+.++|.|.+++++++.. ++.|+.|++|. .+.+++|++.++ +
T Consensus 5 a~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~-~~~~~~~~~~~~-~ 80 (151)
T 3raz_A 5 ADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG--SVDMVGIALDT-SDNIGNFLKQTP-V 80 (151)
T ss_dssp --CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT--TEEEEEEESSC-HHHHHHHHHHSC-C
T ss_pred cchhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCC-hHHHHHHHHHcC-C
Confidence 3556656899999999999999999999999999999999999999998654 69999999974 578899999887 4
Q ss_pred ccccCc---hhhHHHHHhcC--CCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCCc
Q 008845 400 ALPFGD---ARKASLSRKFK--VSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPE 472 (551)
Q Consensus 400 ~~~~~~---d~~~~l~~~~~--v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~~ 472 (551)
.+|... +....+++.|+ +.++|+++|||++|+++.+..+. .. .++|.+.|+++..+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGE-----------VN---EKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSC-----------CC---HHHHHHHHHHHHTC---
T ss_pred CCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCC-----------CC---HHHHHHHHHHHHHHhhc
Confidence 566543 34567899999 99999999999999999884321 22 35567777777766544
No 25
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.83 E-value=1.9e-20 Score=165.12 Aligned_cols=134 Identities=17% Similarity=0.259 Sum_probs=116.0
Q ss_pred cCCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 318 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.++.|++|.+.+.+++|++++
T Consensus 9 ~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~ 86 (148)
T 3hcz_A 9 KKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK--GIQVYAANIERKDEEWLKFIRSK 86 (148)
T ss_dssp SBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG--TEEEEEEECCSSSHHHHHHHHHH
T ss_pred CcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CEEEEEEEecCCHHHHHHHHHHc
Confidence 34588988 9999999999999999999999999999999999999999999876 69999999998888999999998
Q ss_pred CCcccccCchhhHH--HHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHh
Q 008845 397 PWLALPFGDARKAS--LSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMA 467 (551)
Q Consensus 397 ~~~~~~~~~d~~~~--l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~ 467 (551)
++..++...|.... +++.|++.++|+++|+|++|+++.+.. ....++++.+.+.+++
T Consensus 87 ~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~--------------g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 87 KIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRI--------------GYENLDDFLVQYEKSL 145 (148)
T ss_dssp TCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESC--------------CGGGHHHHHHHHHHHH
T ss_pred CCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecC--------------CHHHHHHHHHHHHHHh
Confidence 86658877777766 999999999999999999999998842 1245566666666554
No 26
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.83 E-value=7.1e-20 Score=162.38 Aligned_cols=138 Identities=21% Similarity=0.397 Sum_probs=117.1
Q ss_pred CCc-ccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDL-DFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~-~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..| +|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.++.|++|.+.+.++++++..
T Consensus 8 ~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~ 85 (152)
T 2lja_A 8 PSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGK--DIHFVSLSCDKNKKAWENMVTKD 85 (152)
T ss_dssp CCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS--SEEEEEEECCSCHHHHHHHHHHH
T ss_pred CCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC--CeEEEEEEccCcHHHHHHHHHhc
Confidence 357 8988 9999999999999999999999999999999999999999998764 69999999999888999999988
Q ss_pred CCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCCc
Q 008845 397 PWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPE 472 (551)
Q Consensus 397 ~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~~ 472 (551)
++..+++..|....+++.|++.++|+++|+|++|+++.+..+. . ..++|.+.|++++...+.
T Consensus 86 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~---~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 86 QLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTR-----------P---SDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp TCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCC-----------T---TCHHHHHHHHHHHTCCSS
T ss_pred CCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCC-----------C---CHHHHHHHHHHHhccccc
Confidence 7666677777788899999999999999999999999984321 1 125567777777765543
No 27
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.83 E-value=2.5e-20 Score=175.93 Aligned_cols=145 Identities=16% Similarity=0.228 Sum_probs=119.3
Q ss_pred CCcccee-cCCCCeeecccCCCC-EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGK-TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSF 389 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d-------~~~~~~ 389 (551)
..|+|.+ +.+|+.+++++++|| +|||+||++||++|+.++|.|++++++|+++ +++||+|++| .+.+.+
T Consensus 37 ~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~d~~~~~ 114 (218)
T 3u5r_E 37 RAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ--GLAVVAINSNDAQAFPEETLERV 114 (218)
T ss_dssp BCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT--TEEEEEEECSCTTTCGGGSHHHH
T ss_pred cCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCcccccccCCHHHH
Confidence 3589988 999999999999999 5999999999999999999999999999875 6999999997 577889
Q ss_pred HHHHhcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 390 DEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 390 ~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
++|+++++ +.+|+..|....+++.|+|.++|+++|||++|+|+++....... .+ . ......++|.+.|++++++
T Consensus 115 ~~~~~~~~-~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~-~~-~---~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 115 GAEVKAYG-YGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDAR-PG-N---GKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp HHHHHHHT-CCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCC-TT-S---CCCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHhC-CCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccc-cc-c---ccccCHHHHHHHHHHHHcC
Confidence 99999887 68888888888999999999999999999999999874322110 00 0 0111235677888888876
Q ss_pred CC
Q 008845 470 WP 471 (551)
Q Consensus 470 ~~ 471 (551)
.+
T Consensus 189 ~~ 190 (218)
T 3u5r_E 189 KD 190 (218)
T ss_dssp CC
T ss_pred CC
Confidence 55
No 28
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.82 E-value=5.6e-20 Score=162.04 Aligned_cols=130 Identities=20% Similarity=0.376 Sum_probs=111.0
Q ss_pred CCcccee-cCCCCeeecc--cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHH-hhcCCCeEEEEEeCCCChHHHHHHHh
Q 008845 319 GDLDFVV-GKNGGKVPVS--DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKI-KERNESLEVVFISSDRDQTSFDEFFK 394 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~--~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~-~~~~~~~~vv~vs~d~~~~~~~~~~~ 394 (551)
..|+|.+ +.+|+.++++ +++||++||+||++||++|+.++|.|.++++++ +++ ++.++.|++|.+.+.++++++
T Consensus 10 ~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~ 87 (148)
T 3fkf_A 10 SAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK--NFAMLGISLDIDREAWETAIK 87 (148)
T ss_dssp BCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT--TEEEEEEECCSCHHHHHHHHH
T ss_pred cCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC--CeEEEEEECCCCHHHHHHHHH
Confidence 3588988 9999999999 999999999999999999999999999999999 554 699999999999889999999
Q ss_pred cCCCcccccCchh---hHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhc
Q 008845 395 GMPWLALPFGDAR---KASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 468 (551)
Q Consensus 395 ~~~~~~~~~~~d~---~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~ 468 (551)
.++ +.+|...+. ...+++.|++.++|+++|+|++|+++.+.. ..++|.+.|+++++
T Consensus 88 ~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-----------------~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 88 KDT-LSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI-----------------QGEALTGKLKELLK 146 (148)
T ss_dssp HTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC-----------------CHHHHHHHHHHHC-
T ss_pred HcC-CCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC-----------------CHHHHHHHHHHHHc
Confidence 887 466666555 678999999999999999999999999832 23556666766654
No 29
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.82 E-value=5.4e-21 Score=170.79 Aligned_cols=135 Identities=23% Similarity=0.258 Sum_probs=107.6
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|++++|++++||+++|+|| ++||++|+.++|.|.+++++++.. ++.+++||.| +++..++|.+++
T Consensus 9 ~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~--~~~~v~vs~d-~~~~~~~~~~~~ 85 (157)
T 4g2e_A 9 LAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV--NAVVLGISVD-PPFSNKAFKEHN 85 (157)
T ss_dssp BCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGC--SSEEEEEESS-CHHHHHHHHHHT
T ss_pred CCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhccccccccccc--CceEeeeccc-chhHHHHHHHHc
Confidence 4589998 9999999999999999999999 999999999999999999998765 6999999997 457788999888
Q ss_pred CCcccccCchhhHHHHHhcCCC-----------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHH
Q 008845 397 PWLALPFGDARKASLSRKFKVS-----------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNE 465 (551)
Q Consensus 397 ~~~~~~~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~ 465 (551)
+ +++|++.|.++.+++.|||. ..|++||||++|+|+++..... +..+..++++++.|++
T Consensus 86 ~-~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~---------~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 86 K-LNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDD---------PTKEPPYDEIEKVVKS 155 (157)
T ss_dssp T-CCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESS---------TTCCCCHHHHHHHHHH
T ss_pred C-CcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCC---------CCCCCCHHHHHHHHHH
Confidence 7 67899999999999999984 4689999999999998854321 2233456677777765
Q ss_pred H
Q 008845 466 M 466 (551)
Q Consensus 466 ~ 466 (551)
|
T Consensus 156 L 156 (157)
T 4g2e_A 156 L 156 (157)
T ss_dssp T
T ss_pred h
Confidence 4
No 30
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.82 E-value=1e-19 Score=163.66 Aligned_cols=140 Identities=22% Similarity=0.363 Sum_probs=111.7
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 397 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 397 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.++.|++|.+.+.+++|+++++
T Consensus 13 ~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~v~~v~v~~d~~~~~~~~~~~~~~ 90 (165)
T 3or5_A 13 PAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR--GFTFVGIAVNEQLPNVKNYMKTQG 90 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT--TEEEEEEECSCCHHHHHHHHHHHT
T ss_pred CCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHHHHHHcC
Confidence 3588988 9999999999999999999999999999999999999999999865 699999999998899999998877
Q ss_pred CcccccCchhhHHHHHhc------CCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 398 WLALPFGDARKASLSRKF------KVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 398 ~~~~~~~~d~~~~l~~~~------~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
+.+|+..+.. .+.+.| ++.++|+++|||++|+++.+..+. . ..++|.+.|++++....
T Consensus 91 -~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~-----------~---~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 91 -IIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGP-----------R---SKADFDRIVKMALGAKA 154 (165)
T ss_dssp -CCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSC-----------C---CHHHHHHHHHHHHC---
T ss_pred -CCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCC-----------C---CHHHHHHHHHHHHhhhc
Confidence 4667666654 677888 899999999999999999874321 1 23556777777776544
Q ss_pred ccccc
Q 008845 472 ENVKH 476 (551)
Q Consensus 472 ~~~~~ 476 (551)
.....
T Consensus 155 ~~~~~ 159 (165)
T 3or5_A 155 ATKEG 159 (165)
T ss_dssp -----
T ss_pred ccccc
Confidence 43333
No 31
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.82 E-value=7e-20 Score=164.64 Aligned_cols=134 Identities=16% Similarity=0.198 Sum_probs=116.1
Q ss_pred CCccce--e-cCCCCeeecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHh
Q 008845 319 GDLDFV--V-GKNGGKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 394 (551)
Q Consensus 319 ~~~~f~--~-~~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 394 (551)
..|+|. + +.+|+++++++++||++||+||+ +||++|+.++|.|.+++++|+++ +++||+|++| +++.+++|++
T Consensus 12 ~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~--~~~vv~vs~d-~~~~~~~~~~ 88 (163)
T 3gkn_A 12 PAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA--GAKILGVSRD-SVKSHDNFCA 88 (163)
T ss_dssp CGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT--TCEEEEEESS-CHHHHHHHHH
T ss_pred cCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC--CCEEEEEeCC-CHHHHHHHHH
Confidence 458999 8 99999999999999999999998 99999999999999999999876 6999999998 6788999999
Q ss_pred cCCCcccccCchhhHHHHHhcCCCC------------cceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHH
Q 008845 395 GMPWLALPFGDARKASLSRKFKVSG------------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQ 462 (551)
Q Consensus 395 ~~~~~~~~~~~d~~~~l~~~~~v~~------------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~ 462 (551)
+++ +.+|+..|....+++.|++.. +|+++|||++|+|++... + ......++++.+.
T Consensus 89 ~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~-------~----~~~~~~~~~il~~ 156 (163)
T 3gkn_A 89 KQG-FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWR-------K----VKVAGHADAVLAA 156 (163)
T ss_dssp HHC-CSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEEC-------S----CCSTTHHHHHHHH
T ss_pred HhC-CCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEc-------C----CCcccCHHHHHHH
Confidence 887 678888888899999999987 999999999999998741 1 1234566777777
Q ss_pred HHHHh
Q 008845 463 YNEMA 467 (551)
Q Consensus 463 l~~~~ 467 (551)
|+++.
T Consensus 157 l~~l~ 161 (163)
T 3gkn_A 157 LKAHA 161 (163)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 77664
No 32
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.81 E-value=1.7e-18 Score=164.43 Aligned_cols=184 Identities=13% Similarity=0.196 Sum_probs=120.1
Q ss_pred CCcEEEEEEecC-CCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcC
Q 008845 178 EGKTIGLYFSMS-SYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFE 256 (551)
Q Consensus 178 ~gk~v~l~f~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~ 256 (551)
+++.++++|+++ ||++|+.+.|.+.++++. ...+.++.++++..+ .+.+++.|+
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~----~~~v~~~~vd~~~~~---------------------~~~~~~~~~ 75 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL----TDKLSYEIVDFDTPE---------------------GKELAKRYR 75 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT----CTTEEEEEEETTSHH---------------------HHHHHHHTT
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh----CCceEEEEEeCCCcc---------------------cHHHHHHcC
Confidence 456778999999 999999999999987743 234445555554322 457899999
Q ss_pred cCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCee-ecc
Q 008845 257 LSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV-PVS 335 (551)
Q Consensus 257 v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v-~l~ 335 (551)
|.++||++++.. |+... ....|. .+.+.+..+......... . ...+ +.+.+ .+.
T Consensus 76 v~~~Pt~~~~~~-g~~~~------~~~~G~----~~~~~l~~~l~~~l~~~~----------~--~~~l--~~~~~~~~~ 130 (226)
T 1a8l_A 76 IDRAPATTITQD-GKDFG------VRYFGL----PAGHEFAAFLEDIVDVSR----------E--ETNL--MDETKQAIR 130 (226)
T ss_dssp CCSSSEEEEEET-TBCCS------EEEESC----CCTTHHHHHHHHHHHHHH----------T--CCCC--CHHHHHHHT
T ss_pred CCcCceEEEEcC-Cceee------EEEecc----CcHHHHHHHHHHHHhhcC----------C--CCCC--CHHHHHHHH
Confidence 999999999943 32110 000111 123444454433221100 0 0001 11111 012
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 336 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER-NESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 336 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
...++.++|+||++||++|+.+.|.+.++++.++.+ ..++.++.|++|..+ .+++.
T Consensus 131 ~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~-----------------------~l~~~ 187 (226)
T 1a8l_A 131 NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP-----------------------EWADQ 187 (226)
T ss_dssp TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH-----------------------HHHHH
T ss_pred hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCH-----------------------HHHHh
Confidence 223455699999999999999999999999998731 124888888887554 58999
Q ss_pred cCCCCcceEEEECCCCcEEEc
Q 008845 415 FKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 415 ~~v~~~P~~~lid~~G~i~~~ 435 (551)
|+|+++||++++ ++|+.+.+
T Consensus 188 ~~v~~~Pt~~~~-~~G~~~~~ 207 (226)
T 1a8l_A 188 YNVMAVPKIVIQ-VNGEDRVE 207 (226)
T ss_dssp TTCCSSCEEEEE-ETTEEEEE
T ss_pred CCCcccCeEEEE-eCCceeEE
Confidence 999999998888 68988765
No 33
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.81 E-value=1.1e-19 Score=167.24 Aligned_cols=137 Identities=26% Similarity=0.385 Sum_probs=114.1
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCC-hHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRD-QTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~-~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++.. +++|++|++|.+ .+.+++|++++
T Consensus 39 ~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~ 116 (186)
T 1jfu_A 39 KLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP--NFEVVAINIDTRDPEKPKTFLKEA 116 (186)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT--TEEEEEEECCCSCTTHHHHHHHHT
T ss_pred cCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC--CcEEEEEECCCCCHHHHHHHHHHc
Confidence 4588988 9999999999999999999999999999999999999999999743 699999999965 56788999998
Q ss_pred CCcccccCchhhHHHHHhcCCC----CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 397 PWLALPFGDARKASLSRKFKVS----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 397 ~~~~~~~~~d~~~~l~~~~~v~----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
+...+|+..|....+.+.|++. ++|+++|||++|+|+.+..+. . ++ ..++|.+.|+.++.+
T Consensus 117 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~-------~--~~---~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 117 NLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGP-------A--EW---ASEDALKLIRAATGK 181 (186)
T ss_dssp TCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESC-------C--CT---TSHHHHHHHHHHHC-
T ss_pred CCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecC-------C--cc---CHHHHHHHHHHHhcc
Confidence 8667888888888999999986 999999999999999874321 1 11 124566777777654
No 34
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.81 E-value=1.7e-19 Score=160.13 Aligned_cols=140 Identities=19% Similarity=0.307 Sum_probs=116.9
Q ss_pred ccCCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-ChHHHHHHHh
Q 008845 317 VSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-DQTSFDEFFK 394 (551)
Q Consensus 317 ~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-~~~~~~~~~~ 394 (551)
....|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.++.|+++. +.+.+++|++
T Consensus 5 G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~ 82 (153)
T 2l5o_A 5 SKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK--NFQVLAVAQPIDPIESVRQYVK 82 (153)
T ss_dssp CTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT--TEEEEEEECTTSCHHHHHHHHH
T ss_pred CCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CeEEEEEecCCCCHHHHHHHHH
Confidence 344589988 9999999999999999999999999999999999999999999865 69999999864 4577889998
Q ss_pred cCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCCcc
Q 008845 395 GMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPEN 473 (551)
Q Consensus 395 ~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~~~ 473 (551)
.++ +.+++..+....+++.|+|.++|+++|||++|+++.+..+. ...++|.+.|++++......
T Consensus 83 ~~~-~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~--------------~~~~~l~~~l~~ll~~~~~~ 146 (153)
T 2l5o_A 83 DYG-LPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGE--------------PDFGKLYQEIDTAWRNSDAE 146 (153)
T ss_dssp HTT-CCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESS--------------CCHHHHHHHHHHHHHCCSSC
T ss_pred HcC-CCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCC--------------CCHHHHHHHHHHHHHhhhhc
Confidence 887 56777778788899999999999999999999998763221 13366788888887765443
No 35
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.81 E-value=2.4e-19 Score=161.47 Aligned_cols=124 Identities=35% Similarity=0.767 Sum_probs=108.9
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+| .+++++++|| +||+|||+||++|+.++|.|.++++++++..++.|++|++|.+.+.+++|+++++|..+++...+
T Consensus 37 ~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 115 (165)
T 3s9f_A 37 QAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRN 115 (165)
T ss_dssp TTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHH
T ss_pred CCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchh
Confidence 355 9999999999 99999999999999999999999999987446999999999999999999999999888888766
Q ss_pred hHHHHHhhcCCCCCcEEEEEcCC-CeEEEcCcchhh-hhcCCCCCCch
Q 008845 87 TRDKLDELFKVMGIPHLVILDEN-GKVLSDGGVEII-REYGVEGYPFT 132 (551)
Q Consensus 87 ~~~~l~~~~~v~~~P~~~lid~~-G~i~~~~~~~~~-~~~~~~~~~~~ 132 (551)
....+.+.|++.++|+++|||++ |+|+.+.+...+ .+.....+||.
T Consensus 116 ~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~ 163 (165)
T 3s9f_A 116 IVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWR 163 (165)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCC
Confidence 65789999999999999999998 999998775544 45556667775
No 36
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.80 E-value=3.2e-19 Score=154.64 Aligned_cols=115 Identities=25% Similarity=0.482 Sum_probs=103.5
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEe-----CCCChHHHHHHH
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFIS-----SDRDQTSFDEFF 393 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs-----~d~~~~~~~~~~ 393 (551)
.|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.++++++.. ++.++.|. .+.+.+.+.+++
T Consensus 2 ~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~ 78 (138)
T 4evm_A 2 VADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD---DYVVLTVVSPGHKGEQSEADFKNWY 78 (138)
T ss_dssp CCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT---TEEEEEEECTTSTTCCCHHHHHHHH
T ss_pred CCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC---CcEEEEEEcCCCCchhhHHHHHHHH
Confidence 478988 999999999999999999999999999999999999999888654 48999994 456778999999
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEccc
Q 008845 394 KGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 394 ~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~ 437 (551)
+.+++..+|+..+....+++.|++.++|+++|+|++|+++.+..
T Consensus 79 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 122 (138)
T 4evm_A 79 KGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHP 122 (138)
T ss_dssp TTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEE
T ss_pred hhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEeec
Confidence 99997799998888889999999999999999999999998743
No 37
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.80 E-value=4.9e-19 Score=162.32 Aligned_cols=117 Identities=17% Similarity=0.220 Sum_probs=103.9
Q ss_pred cCCcccee-cC--CCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCe------EEEEEeCCC-ChH
Q 008845 318 SGDLDFVV-GK--NGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESL------EVVFISSDR-DQT 387 (551)
Q Consensus 318 ~~~~~f~~-~~--~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~------~vv~vs~d~-~~~ 387 (551)
...|+|.+ +. +|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++ .|+.|++|. +.+
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~~~~~v~~v~v~~d~~~~~ 112 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA--GNGDTPGGTVLGINVRDYSRD 112 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC--C---CCSEEEEEEECSCCCHH
T ss_pred CCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc--CCCccCCcEEEEEECCCCCHH
Confidence 34589988 88 99999999999999999999999999999999999999999876 46 999999998 788
Q ss_pred HHHHHHhcCCCcccccCchhhHHHHHhc---CCCCcceEEEECCCCcEEEccc
Q 008845 388 SFDEFFKGMPWLALPFGDARKASLSRKF---KVSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~d~~~~l~~~~---~v~~~P~~~lid~~G~i~~~~~ 437 (551)
.+++|+++++ +.+|+..|....+.+.| ++.++|+++|||++|+++.+..
T Consensus 113 ~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 164 (183)
T 3lwa_A 113 IAQDFVTDNG-LDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFL 164 (183)
T ss_dssp HHHHHHHHTT-CCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEEC
T ss_pred HHHHHHHHcC-CCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEc
Confidence 9999999887 56888888888888887 4899999999999999998743
No 38
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.80 E-value=5e-19 Score=158.99 Aligned_cols=135 Identities=22% Similarity=0.354 Sum_probs=110.9
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhc--CCCeEEEEEeCCC---ChHHHHHH
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKER--NESLEVVFISSDR---DQTSFDEF 392 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~--~~~~~vv~vs~d~---~~~~~~~~ 392 (551)
.|+|.+ +.+|+++++++++||++||+||++||++ |+.++|.|+++++++++. ..+++|++|++|. +++.+++|
T Consensus 3 ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~ 82 (164)
T 2ggt_A 3 GGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANY 82 (164)
T ss_dssp CCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHH
T ss_pred CCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHH
Confidence 478988 9999999999999999999999999998 999999999999999762 1369999999986 36788999
Q ss_pred HhcCCCcccccC---chhhHHHHHhcCCCCcc---------------eEEEECCCCcEEEcccchhhhhcCCCCCCCCHH
Q 008845 393 FKGMPWLALPFG---DARKASLSRKFKVSGIP---------------MLVAIGPSGRTITKEARDMIAVHGAEAYPFTEE 454 (551)
Q Consensus 393 ~~~~~~~~~~~~---~d~~~~l~~~~~v~~~P---------------~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 454 (551)
+++++ +.+++. .|....+++.|+|.++| +++|||++|+++.+..+. ..
T Consensus 83 ~~~~~-~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~-----------~~-- 148 (164)
T 2ggt_A 83 VKEFS-PKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN-----------KR-- 148 (164)
T ss_dssp HHTTC-SSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT-----------CC--
T ss_pred HHHcC-CCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC-----------CC--
Confidence 99876 445554 46667899999999999 899999999999874321 12
Q ss_pred HHHHHHHHHHHHhcc
Q 008845 455 RMKEIDGQYNEMAKG 469 (551)
Q Consensus 455 ~~~~l~~~l~~~~~~ 469 (551)
.++|.+.|+++++.
T Consensus 149 -~~~l~~~l~~ll~~ 162 (164)
T 2ggt_A 149 -KGEIAASIATHMRP 162 (164)
T ss_dssp -HHHHHHHHHHHHGG
T ss_pred -HHHHHHHHHHHHHh
Confidence 25567777777653
No 39
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.80 E-value=3.7e-19 Score=163.92 Aligned_cols=142 Identities=10% Similarity=0.203 Sum_probs=115.2
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d-------~~~~~~~ 390 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ +.|+.|++| .+.+.++
T Consensus 12 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~~~~~~d~~~~~~ 88 (188)
T 2cvb_A 12 PLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDYEKYPEDAPEKMA 88 (188)
T ss_dssp BCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCTTTCGGGSHHHHH
T ss_pred CCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCccccccccCHHHHH
Confidence 3588988 9999999999999999999999999999999999999999999764 999999996 3667889
Q ss_pred HHHhcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhh-hcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 391 EFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIA-VHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 391 ~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~-~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
+|+++++ +.+|+..|....+++.|++.++|+++|||++|++++++...... ..| ....++|.+.|++++++
T Consensus 89 ~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g-------~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 89 AFAEEHG-IFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPS-------KVQSHDLEAAIEALLRG 160 (188)
T ss_dssp HHHHHHT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGG-------GCCCCHHHHHHHHHHTT
T ss_pred HHHHHhC-CCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCcccccc-------ccCHHHHHHHHHHHHcC
Confidence 9999887 57888888888999999999999999999999999882211000 000 01224577778887765
Q ss_pred CC
Q 008845 470 WP 471 (551)
Q Consensus 470 ~~ 471 (551)
.+
T Consensus 161 ~~ 162 (188)
T 2cvb_A 161 EE 162 (188)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 40
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.80 E-value=2.5e-19 Score=161.31 Aligned_cols=110 Identities=22% Similarity=0.397 Sum_probs=102.3
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC---------------
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD--------------- 383 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d--------------- 383 (551)
.|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++ ++.|+.|++|
T Consensus 17 ~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d~~~~~~~~~~~~~~~ 92 (165)
T 3ha9_A 17 EASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFWTAEALKALGLNKPGY 92 (165)
T ss_dssp HHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECCSHHHHHHHTCCSTTS
T ss_pred CCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEecccccccccccccccC
Confidence 378887 99999999999999999999999999999999999999999987 3999999999
Q ss_pred ---CChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEE
Q 008845 384 ---RDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTIT 434 (551)
Q Consensus 384 ---~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~ 434 (551)
.+.+.+++|++.+++..+|+..| ...+++.|+|.++|+++|||++|+++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 93 PPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp CCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred CCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 78899999999988558888888 889999999999999999999999999
No 41
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.80 E-value=2.6e-19 Score=155.31 Aligned_cols=111 Identities=22% Similarity=0.355 Sum_probs=102.4
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 397 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 397 (551)
..|+|.+ +.+|+.+++++++||+++|+||++||++|+.++|.|.+++++++ ++.++.|++|.+.+.+++|+++++
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~ 78 (136)
T 1lu4_A 3 ERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKYN 78 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHHT
T ss_pred CCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHcC
Confidence 3478888 99999999999999999999999999999999999999999886 489999999998999999999887
Q ss_pred CcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEc
Q 008845 398 WLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 398 ~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 435 (551)
+.+|+..|....+++.|++.++|+++++|++|+++ +
T Consensus 79 -~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~ 114 (136)
T 1lu4_A 79 -LNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-F 114 (136)
T ss_dssp -CCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-E
T ss_pred -CCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-E
Confidence 47888888888999999999999999999999998 5
No 42
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.80 E-value=1.3e-20 Score=169.48 Aligned_cols=138 Identities=21% Similarity=0.304 Sum_probs=116.6
Q ss_pred CCcccee-cCCCCeeecccC--CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHh
Q 008845 319 GDLDFVV-GKNGGKVPVSDL--AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 394 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~--~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 394 (551)
..|+|.+ +.+|++++|+++ +||+++|+|| ++|||+|+.++|.|++++++|++. ++++++||.| +++..++|.+
T Consensus 10 ~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~--~v~vv~is~d-~~~~~~~~~~ 86 (164)
T 4gqc_A 10 KAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA--NAEVLAISVD-SPWCLKKFKD 86 (164)
T ss_dssp BCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS--SSEEEEEESS-CHHHHHHHHH
T ss_pred CCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc--CceEEEecCC-CHHHHHHHHH
Confidence 4589998 999999999998 8999999998 999999999999999999999876 6999999997 5678889988
Q ss_pred cCCCcccccCchhhHHHHHhcCCC----------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHH
Q 008845 395 GMPWLALPFGDARKASLSRKFKVS----------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYN 464 (551)
Q Consensus 395 ~~~~~~~~~~~d~~~~l~~~~~v~----------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~ 464 (551)
+++ +++|++.|.++.+++.|||. ..|++||||++|+|+++..... |..+.+++++.+.++
T Consensus 87 ~~~-~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~---------~~~~~~~~eil~~l~ 156 (164)
T 4gqc_A 87 ENR-LAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDN---------PLNEPDYDEVVREAN 156 (164)
T ss_dssp HTT-CCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSC---------TTCCCCHHHHHHHHH
T ss_pred hcC-cccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCC---------CCCCCCHHHHHHHHH
Confidence 887 68999999999999999984 3689999999999998853221 334446677888887
Q ss_pred HHhcc
Q 008845 465 EMAKG 469 (551)
Q Consensus 465 ~~~~~ 469 (551)
+++..
T Consensus 157 ~l~~e 161 (164)
T 4gqc_A 157 KIAGE 161 (164)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 77653
No 43
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.80 E-value=4.1e-19 Score=153.91 Aligned_cols=110 Identities=22% Similarity=0.366 Sum_probs=102.4
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCC
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPW 398 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~ 398 (551)
.|+|.+ +.+|+.+++++++||+++|+||++||++|+.++|.|.+++++++ ++.++.|++|.+.+.+++++++++.
T Consensus 5 ~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (136)
T 1zzo_A 5 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVNKYPV 80 (136)
T ss_dssp GGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHTTC
T ss_pred CCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHHHcCC
Confidence 478888 89999999999999999999999999999999999999999886 3899999999989999999999985
Q ss_pred cccccCchhhHHHHHhcCCCCcceEEEECCCCcEE
Q 008845 399 LALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTI 433 (551)
Q Consensus 399 ~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~ 433 (551)
..+|+..+....+++.|++.++|+++++|++|+++
T Consensus 81 ~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 81 KTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp TTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred CceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE
Confidence 58888888888999999999999999999999998
No 44
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.79 E-value=9.3e-19 Score=153.74 Aligned_cols=124 Identities=37% Similarity=0.743 Sum_probs=106.7
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++..++.+++|++|.+.+.+++|++++++..+++...+
T Consensus 16 ~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d 95 (144)
T 1i5g_A 16 GAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRK 95 (144)
T ss_dssp TTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHH
T ss_pred CCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchH
Confidence 46889999999999 99999999999999999999999999985336999999999999999999999998888877645
Q ss_pred hHHHHHhhcCCCCCcEEEEEc-CCCeEEEcCcchhhhhc-CCCCCCc
Q 008845 87 TRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEIIREY-GVEGYPF 131 (551)
Q Consensus 87 ~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~~-~~~~~~~ 131 (551)
....+.+.|++.++|+++++| ++|+++.+.+...+... ....+||
T Consensus 96 ~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w 142 (144)
T 1i5g_A 96 GMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPW 142 (144)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTC
T ss_pred HHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCC
Confidence 556799999999999999999 99999998776665433 2344554
No 45
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.79 E-value=4.4e-19 Score=162.05 Aligned_cols=133 Identities=18% Similarity=0.172 Sum_probs=113.3
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCC
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 397 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 397 (551)
.|+|.+ +.+|+++++++++||++||+|| ++||++|+.++|.|++++++|+++ +++|++|++|. .+..++|+++++
T Consensus 31 aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~--~~~vv~Vs~D~-~~~~~~~~~~~~ 107 (179)
T 3ixr_A 31 LLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI--NATVLGVSRDS-VKSHDSFCAKQG 107 (179)
T ss_dssp HHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT--TEEEEEEESCC-HHHHHHHHHHHT
T ss_pred CCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEcCCC-HHHHHHHHHHcC
Confidence 478988 9999999999999999999999 999999999999999999999876 69999999984 577888988876
Q ss_pred CcccccCchhhHHHHHhcCCCC------------cceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHH
Q 008845 398 WLALPFGDARKASLSRKFKVSG------------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNE 465 (551)
Q Consensus 398 ~~~~~~~~d~~~~l~~~~~v~~------------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~ 465 (551)
+.+|+..|....+++.|++.. .|++||||++|+|++... + ......++++.+.|++
T Consensus 108 -~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~-------~----~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 108 -FTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWR-------Q----VKVPGHAEEVLNKLKA 175 (179)
T ss_dssp -CCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEEC-------S----CCSTTHHHHHHHHHHH
T ss_pred -CceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEc-------C----CCCCCCHHHHHHHHHH
Confidence 678888898899999999964 689999999999998741 1 1234566777787776
Q ss_pred Hh
Q 008845 466 MA 467 (551)
Q Consensus 466 ~~ 467 (551)
+.
T Consensus 176 l~ 177 (179)
T 3ixr_A 176 HA 177 (179)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 46
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.79 E-value=1e-18 Score=159.10 Aligned_cols=113 Identities=20% Similarity=0.267 Sum_probs=100.3
Q ss_pred cCCcccee-cCCC--CeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHh
Q 008845 318 SGDLDFVV-GKNG--GKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 394 (551)
Q Consensus 318 ~~~~~f~~-~~~g--~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 394 (551)
...|+|.+ +.+| +.+++++++||++||+||++||++|+.++|.|++++++ ++.|++|++|.+.+.+++|++
T Consensus 34 ~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~vs~~d~~~~~~~~~~ 107 (176)
T 3kh7_A 34 KPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ------GVVIYGINYKDDNAAAIKWLN 107 (176)
T ss_dssp SBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCEEEEEEESCCHHHHHHHHH
T ss_pred CcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC------CCEEEEEeCCCCHHHHHHHHH
Confidence 34589988 8888 88999999999999999999999999999999988765 389999999989999999999
Q ss_pred cCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcc
Q 008845 395 GMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 395 ~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 436 (551)
++++....+..|....+++.|++.++|+++|||++|+|+++.
T Consensus 108 ~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 149 (176)
T 3kh7_A 108 ELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKI 149 (176)
T ss_dssp HTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEE
T ss_pred HcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEE
Confidence 988543335667788999999999999999999999999874
No 47
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.79 E-value=1.5e-18 Score=157.10 Aligned_cols=134 Identities=20% Similarity=0.325 Sum_probs=108.6
Q ss_pred cccee-cCCCCeeecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhc--CCCeEEEEEeCCC---ChHHHHHHH
Q 008845 321 LDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKER--NESLEVVFISSDR---DQTSFDEFF 393 (551)
Q Consensus 321 ~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~--~~~~~vv~vs~d~---~~~~~~~~~ 393 (551)
|+|.+ +.+|+.+++++++||++||+||++||++ |+.++|.|+++++++++. ..+++||+|++|. +++.+++|+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~ 86 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYV 86 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHH
Confidence 88988 9999999999999999999999999998 999999999999999752 2369999999983 577899999
Q ss_pred hcCCCcccccCc---hhhHHHHHhcCCCCcc---------------eEEEECCCCcEEEcccchhhhhcCCCCCCCCHHH
Q 008845 394 KGMPWLALPFGD---ARKASLSRKFKVSGIP---------------MLVAIGPSGRTITKEARDMIAVHGAEAYPFTEER 455 (551)
Q Consensus 394 ~~~~~~~~~~~~---d~~~~l~~~~~v~~~P---------------~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~ 455 (551)
++++ +.+++.. +....+++.|+|.++| +++|||++|+|+.+..+. ..
T Consensus 87 ~~~~-~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~-----------~~--- 151 (171)
T 2rli_A 87 QDFH-PRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS-----------RS--- 151 (171)
T ss_dssp HTTC-TTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS-----------CC---
T ss_pred HHcC-CCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC-----------CC---
Confidence 9886 4455543 3445789999999888 999999999999874321 22
Q ss_pred HHHHHHHHHHHhcc
Q 008845 456 MKEIDGQYNEMAKG 469 (551)
Q Consensus 456 ~~~l~~~l~~~~~~ 469 (551)
.++|.+.|+++++.
T Consensus 152 ~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 152 AEQISDSVRRHMAA 165 (171)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 24566666666654
No 48
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.78 E-value=1e-18 Score=155.21 Aligned_cols=132 Identities=20% Similarity=0.330 Sum_probs=111.9
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC--CCChHHHHHHHhc
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS--DRDQTSFDEFFKG 395 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~--d~~~~~~~~~~~~ 395 (551)
..|+|.+ +.+|+.+++++++ |++||+||++||++|+.++|.|.++++++ . +.++.|++ +.+.+.+++|++.
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~---v~~v~v~~d~~~~~~~~~~~~~~ 83 (154)
T 3ia1_A 10 PLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--G---VPFYVISREPRDTREVVLEYMKT 83 (154)
T ss_dssp ECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--C---CCEEEEECCTTCCHHHHHHHHTT
T ss_pred cCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--C---CeEEEEeCCCcccHHHHHHHHHH
Confidence 3488988 9999999999999 99999999999999999999999999998 3 89999999 5678899999999
Q ss_pred CCCcccccCch---hhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 396 MPWLALPFGDA---RKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 396 ~~~~~~~~~~d---~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
++ +.+|+..+ ....+++.|++.++|+++|||++|+++.+..+. . ..++|.+.|++++...+
T Consensus 84 ~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~---~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 84 YP-RFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGR-----------A---GREALLDALLLAGADLE 147 (154)
T ss_dssp CT-TEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESB-----------C---CHHHHHHHHHHTTCCC-
T ss_pred cC-CCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCC-----------C---CHHHHHHHHHhccCccc
Confidence 98 47777766 788999999999999999999999999874321 1 23567777777766544
No 49
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.78 E-value=2.1e-17 Score=167.65 Aligned_cols=271 Identities=17% Similarity=0.200 Sum_probs=167.7
Q ss_pred CCc-EEEEEecCCCHhhHhhhHH-------HHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHH
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPI-------LAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDK 90 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~-------l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (551)
.++ ++|+||||||+ |+.++|. |.++++.++.. ++.++.|+++... .
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~-~v~~~~Vd~~~~~------------------------~ 80 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK-DIGFVMVDAKKEA------------------------K 80 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS-SEEEEEEETTTTH------------------------H
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc-CcEEEEEeCCCCH------------------------H
Confidence 467 99999999999 9999999 89999999765 4889999888664 4
Q ss_pred HHhhcCCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCc
Q 008845 91 LDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGR 170 (551)
Q Consensus 91 l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 170 (551)
+++.|+|.++||++++ ++|++.... |. .+.+.+.+++.... ...... +++ .+
T Consensus 81 l~~~~~v~~~Pt~~~~-~~g~~~~~~--------G~----~~~~~l~~~i~~~~----~~~~~~----------l~~-~~ 132 (350)
T 1sji_A 81 LAKKLGFDEEGSLYVL-KGDRTIEFD--------GE----FAADVLVEFLLDLI----EDPVEI----------INS-KL 132 (350)
T ss_dssp HHHHHTCCSTTEEEEE-ETTEEEEEC--------SC----CCHHHHHHHHHTTS----SCSEEE----------CCS-HH
T ss_pred HHHhcCCCccceEEEE-ECCcEEEec--------CC----CCHHHHHHHHHHhc----CCccee----------ccc-hH
Confidence 9999999999999999 788854332 21 23444444432210 000000 000 00
Q ss_pred eee-ccccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHH
Q 008845 171 KIS-VSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSRE 249 (551)
Q Consensus 171 ~~~-~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~ 249 (551)
.+. +.....+.+.+.|+.++| ....+.+.+++..++.. +.|.... .+
T Consensus 133 ~~~~~~~~~~~~~vv~ff~~~~---~~~~~~~~~~A~~~~~~-----~~f~~~~------------------------~~ 180 (350)
T 1sji_A 133 EVQAFERIEDQIKLIGFFKSEE---SEYYKAFEEAAEHFQPY-----IKFFATF------------------------DK 180 (350)
T ss_dssp HHHHHHHCCSSCEEEEECSCTT---SHHHHHHHHHHHHTTTT-----SEEEEEC------------------------CH
T ss_pred HHHHHhccCCCcEEEEEECCCC---cHHHHHHHHHHHhhccC-----cEEEEEC------------------------CH
Confidence 000 000012344555666664 45567888888887654 3343322 23
Q ss_pred HHHhhcCcCCcceEEEECCCCC-c-ccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccce-ec
Q 008845 250 KLARYFELSTLPTLVIIGPDGK-T-LHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFV-VG 326 (551)
Q Consensus 250 ~l~~~f~v~~~P~lvi~~~~gk-~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~-~~ 326 (551)
.+++.|+++ .|+++++.+.+. . .+. | -+++.+.+..++..... |.+. ++
T Consensus 181 ~~~~~~~v~-~p~i~~~~~~~~~~~~y~---------g---~~~~~~~l~~fi~~~~~---------------p~v~elt 232 (350)
T 1sji_A 181 GVAKKLSLK-MNEVDFYEPFMDEPIAIP---------D---KPYTEEELVEFVKEHQR---------------PTLRRLR 232 (350)
T ss_dssp HHHHHHTCC-TTCEEEECTTCSSCEECS---------S---SSCCHHHHHHHHHHHCC---------------CSEEECC
T ss_pred HHHHHcCCC-CCcEEEEeCCCCCceecC---------C---CCCCHHHHHHHHHHcCc---------------cchhhcC
Confidence 577889999 999999976432 1 111 1 13577888888763211 1111 11
Q ss_pred C-CCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCc
Q 008845 327 K-NGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 405 (551)
Q Consensus 327 ~-~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 405 (551)
. +...+ .+.-..+..+|.|..+||+.|....+.|.++++++++. ..+.++.++.+..+
T Consensus 233 ~~~~~~~-~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~-~~~~f~~id~~~~~------------------- 291 (350)
T 1sji_A 233 PEDMFET-WEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDN-PDLSIVWIDPDDFP------------------- 291 (350)
T ss_dssp TTTHHHH-HHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGC-SSCCEEEECGGGCH-------------------
T ss_pred hhhHHHH-hcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCC-CceEEEEECchhhH-------------------
Confidence 1 11111 11101244455689999999999999999999999851 13677777654332
Q ss_pred hhhHHHH----HhcCCC-CcceEEEECC
Q 008845 406 ARKASLS----RKFKVS-GIPMLVAIGP 428 (551)
Q Consensus 406 d~~~~l~----~~~~v~-~~P~~~lid~ 428 (551)
.+. +.||+. ..|++++++.
T Consensus 292 ----~~~~~~~~~~gi~~~~P~~~i~~~ 315 (350)
T 1sji_A 292 ----LLVAYWEKTFKIDLFKPQIGVVNV 315 (350)
T ss_dssp ----HHHHHHHHHCCSCTTSCEEEEEES
T ss_pred ----HHHHHHHhhcCCCccCCcEEEEec
Confidence 234 788998 5899999987
No 50
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.66 E-value=8.5e-21 Score=166.46 Aligned_cols=120 Identities=34% Similarity=0.732 Sum_probs=106.8
Q ss_pred cccee-cCCCCeeeccc-CCCC-EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC-
Q 008845 321 LDFVV-GKNGGKVPVSD-LAGK-TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM- 396 (551)
Q Consensus 321 ~~f~~-~~~g~~v~l~~-~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~- 396 (551)
|+|.+ +.+|+.+++++ ++|| ++||+||++||++|+.++|.|.++++++++...++.+++|++|.+.+.+++|++++
T Consensus 5 p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~ 84 (143)
T 2lus_A 5 QGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESH 84 (143)
Confidence 67877 89999999999 9999 99999999999999999999999999996433469999999998888899999877
Q ss_pred -CCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchh
Q 008845 397 -PWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDM 440 (551)
Q Consensus 397 -~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~ 440 (551)
+|..+++..+....+++.|+|.++|+++|||++|++++++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~ 129 (143)
T 2lus_A 85 GDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGE 129 (143)
Confidence 56777888887788999999999999999999999999976554
No 51
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.78 E-value=2.1e-19 Score=165.42 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=104.3
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d-------~~~~~~~ 390 (551)
..|+|.+ +.+|+.+++++++||+|||+||++||++|+.++|.|++++++|+++ +++||+|++| .+.+.++
T Consensus 25 ~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~e~~~~~~~~ 102 (187)
T 3dwv_A 25 SIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPSNQFGGQEPGNEEEIK 102 (187)
T ss_dssp SGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG--TCEEEEEEBCCCSSCSSSBTTHHH
T ss_pred ccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC--CeEEEEEECcccCCCCCCCHHHHH
Confidence 3589988 9999999999999999999999999999999999999999999876 6999999998 3567888
Q ss_pred HHHhcCCCcccccCc--hhhHH----HH--------HhcCCCCcc---eEEEECCCCcEEEcccchhhhhcCCCCCCCCH
Q 008845 391 EFFKGMPWLALPFGD--ARKAS----LS--------RKFKVSGIP---MLVAIGPSGRTITKEARDMIAVHGAEAYPFTE 453 (551)
Q Consensus 391 ~~~~~~~~~~~~~~~--d~~~~----l~--------~~~~v~~~P---~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 453 (551)
+|++..-.+.+|+.. |..+. +. ..|++..+| ++||||++|+|+.+..+. .
T Consensus 103 ~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~-----------~-- 169 (187)
T 3dwv_A 103 EFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPG-----------A-- 169 (187)
T ss_dssp HSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTT-----------C--
T ss_pred HHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCC-----------C--
Confidence 888854235666653 22221 21 445677788 999999999999984321 1
Q ss_pred HHHHHHHHHHHHHhcc
Q 008845 454 ERMKEIDGQYNEMAKG 469 (551)
Q Consensus 454 ~~~~~l~~~l~~~~~~ 469 (551)
..++|.+.|++++++
T Consensus 170 -~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 170 -SVKDIEEKLIPLLGS 184 (187)
T ss_dssp -CHHHHHHHHHHHC--
T ss_pred -CHHHHHHHHHHHHhc
Confidence 224577777777764
No 52
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.78 E-value=1.2e-18 Score=153.39 Aligned_cols=132 Identities=18% Similarity=0.226 Sum_probs=111.6
Q ss_pred Ccccee---cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-----ChHHHHH
Q 008845 320 DLDFVV---GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-----DQTSFDE 391 (551)
Q Consensus 320 ~~~f~~---~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-----~~~~~~~ 391 (551)
.|+|.+ +.+|+.+++++++||+++|+||++||++|+.++|.|.+++++++++ +.++.|++|. +.+.+++
T Consensus 7 ~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~ 83 (148)
T 2b5x_A 7 MPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMPRSEDDLDPGKIKE 83 (148)
T ss_dssp CCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECCCSTTTSSHHHHHH
T ss_pred CCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcCCCccccCHHHHHH
Confidence 477765 6899999999999999999999999999999999999999999764 8999999876 6788999
Q ss_pred HHhcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 392 FFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 392 ~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
++++++ +.+|+..+....+++.|+|.++|+++++|++|+++.+..+. . ..++|.+.|++++..
T Consensus 84 ~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~---~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 84 TAAEHD-ITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGG-----------S---GMKMLEKRVNRVLAE 146 (148)
T ss_dssp HHHHTT-CCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESC-----------S---TTHHHHHHHHHHHTT
T ss_pred HHHHcC-CCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCC-----------C---CHHHHHHHHHHHHhc
Confidence 999887 57888888888999999999999999999999999874321 1 124566677766653
No 53
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=1.1e-20 Score=169.02 Aligned_cols=114 Identities=27% Similarity=0.464 Sum_probs=102.0
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHH-HHHHHh-hcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLID-AYKKIK-ERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~-l~~~~~-~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
.|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+ ++++++ .. ++.++.|++|.+.+.+++|.+++
T Consensus 13 ~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~ 90 (159)
T 2ls5_A 13 APDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNA--DFALIGIDRDEPLEKVLAFAKST 90 (159)
Confidence 478888 89999999999999999999999999999999999998 888886 33 69999999998777788898888
Q ss_pred CCcccccCchhhHHHHHhcC--CCCcceEEEECCCCcEEEcc
Q 008845 397 PWLALPFGDARKASLSRKFK--VSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 397 ~~~~~~~~~d~~~~l~~~~~--v~~~P~~~lid~~G~i~~~~ 436 (551)
+ +.+|+..|....+.+.|+ +.++|+++|||++|+++.+.
T Consensus 91 ~-~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~ 131 (159)
T 2ls5_A 91 G-VTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKLT 131 (159)
Confidence 7 588998899999999999 56799999999999999874
No 54
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.78 E-value=1.2e-18 Score=152.83 Aligned_cols=115 Identities=22% Similarity=0.479 Sum_probs=104.1
Q ss_pred cCCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---ChHHHHHHH
Q 008845 318 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQTSFDEFF 393 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~---~~~~~~~~~ 393 (551)
...|+|.+ +.+|+.+++++ +||++||+||++||++|+.++|.|.+++++++.. ++.++.|++|. +.+.+++|+
T Consensus 13 ~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~ 89 (145)
T 3erw_A 13 AVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD--SVKLVTVNLVNSEQNQQVVEDFI 89 (145)
T ss_dssp CSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS--SEEEEEEECGGGSSCHHHHHHHH
T ss_pred CcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC--CEEEEEEEccCCcCCHHHHHHHH
Confidence 34588988 99999999999 9999999999999999999999999999998743 59999999986 788899999
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcc
Q 008845 394 KGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 394 ~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 436 (551)
+.++ +.+|+..+....+++.|++.++|+++|+|++|+++.+.
T Consensus 90 ~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (145)
T 3erw_A 90 KANK-LTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTK 131 (145)
T ss_dssp HHTT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEE
T ss_pred HHcC-CceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEE
Confidence 9887 57888888888999999999999999999999999874
No 55
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.78 E-value=1.3e-18 Score=157.95 Aligned_cols=136 Identities=20% Similarity=0.307 Sum_probs=108.8
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEecCCCh-hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC---CChHHHHHHHh
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCP-PCRAFLPKLIDAYKKIKERNESLEVVFISSD---RDQTSFDEFFK 394 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d---~~~~~~~~~~~ 394 (551)
.|+|.+ +.+|+.+++++++||++||+||++||+ +|+.++|.|.+++++++++..+++||+|++| .+++.+++|++
T Consensus 13 ~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~ 92 (174)
T 1xzo_A 13 VEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAA 92 (174)
T ss_dssp CCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHT
T ss_pred cCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHH
Confidence 589988 999999999999999999999999999 9999999999999999876335999999998 46788999999
Q ss_pred cCCCccc---ccCchhhHHHHHh----------------cCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHH
Q 008845 395 GMPWLAL---PFGDARKASLSRK----------------FKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEER 455 (551)
Q Consensus 395 ~~~~~~~---~~~~d~~~~l~~~----------------~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~ 455 (551)
+++ +.+ ++..|.+..+.+. |++.++|+++|||++|+|+.+..+. . + ..
T Consensus 93 ~~~-~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~-------~--~---~~ 159 (174)
T 1xzo_A 93 NYP-LSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGV-------E--N---TP 159 (174)
T ss_dssp TSC-CCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESS-------S--S---CC
T ss_pred HcC-CCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCC-------C--C---CC
Confidence 887 344 6666655554444 3567899999999999999874321 1 1 12
Q ss_pred HHHHHHHHHHHhc
Q 008845 456 MKEIDGQYNEMAK 468 (551)
Q Consensus 456 ~~~l~~~l~~~~~ 468 (551)
.++|.+.|+++++
T Consensus 160 ~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 160 YDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh
Confidence 4567777777764
No 56
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.78 E-value=4.8e-19 Score=158.59 Aligned_cols=134 Identities=16% Similarity=0.206 Sum_probs=112.1
Q ss_pred CCcccee-cCCCCeeecccCCCC-EEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhc
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGK-TILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKG 395 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 395 (551)
..|+|.+ +.+|+.+++++++|| ++||+|| ++||++|+.++|.|.+++++++++ +++|++|++| +.+.+++|+++
T Consensus 14 ~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~is~d-~~~~~~~~~~~ 90 (160)
T 1xvw_A 14 TAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND--DSAALAISVG-PPPTHKIWATQ 90 (160)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS--SEEEEEEESC-CHHHHHHHHHH
T ss_pred CCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CcEEEEEeCC-CHHHHHHHHHh
Confidence 3588988 999999999999998 9999998 999999999999999999988754 6999999998 56788999998
Q ss_pred CCCcccccCchh--hHHHHHhcCCC----Ccc--eEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHH
Q 008845 396 MPWLALPFGDAR--KASLSRKFKVS----GIP--MLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEM 466 (551)
Q Consensus 396 ~~~~~~~~~~d~--~~~l~~~~~v~----~~P--~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~ 466 (551)
+++ .+|+..|. ...+++.|++. ++| +++|||++|+|+.+..+.. .....++++.+.|+++
T Consensus 91 ~~~-~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~----------~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 91 SGF-TFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQP----------GEVRDQRLWTDALAAL 158 (160)
T ss_dssp HTC-CSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCT----------TCCCCHHHHHHHHHHT
T ss_pred cCC-CceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCC----------CCCCCHHHHHHHHHHh
Confidence 884 78888774 78899999999 999 9999999999999854321 1233566666666654
No 57
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.78 E-value=8.7e-19 Score=165.21 Aligned_cols=136 Identities=16% Similarity=0.197 Sum_probs=112.4
Q ss_pred CCcccee-cC--CC--CeeecccC-CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHH
Q 008845 319 GDLDFVV-GK--NG--GKVPVSDL-AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 391 (551)
Q Consensus 319 ~~~~f~~-~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~ 391 (551)
..|+|.+ +. +| +.++++++ +||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++|. .+..++
T Consensus 30 ~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~--~v~vv~Is~D~-~~~~~~ 106 (221)
T 2c0d_A 30 KAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK--NVELLGISVDS-VYSHLA 106 (221)
T ss_dssp BCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT--TEEEEEEESSC-HHHHHH
T ss_pred CCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEeCCC-HHHHHH
Confidence 4589988 77 89 99999999 9999999999 999999999999999999999865 69999999974 567888
Q ss_pred HHhcCC------CcccccCchhhHHHHHhcCC-----CCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHH
Q 008845 392 FFKGMP------WLALPFGDARKASLSRKFKV-----SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 460 (551)
Q Consensus 392 ~~~~~~------~~~~~~~~d~~~~l~~~~~v-----~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 460 (551)
|++.+. .+.+|+..|....+++.|++ ..+|++||||++|+|+++..+.. ..+...+++.
T Consensus 107 ~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~----------~~~~~~~ell 176 (221)
T 2c0d_A 107 WKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDL----------PIGRNVQEVL 176 (221)
T ss_dssp HHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECT----------TCCCCHHHHH
T ss_pred HHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCC----------CCCCCHHHHH
Confidence 988771 46788888888899999999 47999999999999999854321 0123445666
Q ss_pred HHHHHHh
Q 008845 461 GQYNEMA 467 (551)
Q Consensus 461 ~~l~~~~ 467 (551)
+.|+++.
T Consensus 177 ~~l~~L~ 183 (221)
T 2c0d_A 177 RTIDSII 183 (221)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666654
No 58
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.77 E-value=2.9e-18 Score=151.00 Aligned_cols=124 Identities=42% Similarity=0.803 Sum_probs=104.9
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+| .+++++++|| ++|+||++||++|+.++|.|.++++++++..++.+++|++|.+.+.+++|++++++..+++...+
T Consensus 17 ~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d 95 (146)
T 1o8x_A 17 GDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSE 95 (146)
T ss_dssp TTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHH
T ss_pred CCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhh
Confidence 357 9999999999 99999999999999999999999999985336999999999999999999999998877776545
Q ss_pred hHHHHHhhcCCCCCcEEEEEc-CCCeEEEcCcchhhhhc-CCCCCCch
Q 008845 87 TRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEIIREY-GVEGYPFT 132 (551)
Q Consensus 87 ~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~~-~~~~~~~~ 132 (551)
....+.+.|++.++|+++++| ++|+++.+.+...+.+. ....++|.
T Consensus 96 ~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (146)
T 1o8x_A 96 AVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWK 143 (146)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCC
T ss_pred HHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCC
Confidence 456799999999999999999 89999998776655333 33444543
No 59
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.77 E-value=1.1e-17 Score=160.22 Aligned_cols=180 Identities=14% Similarity=0.186 Sum_probs=117.3
Q ss_pred cEEEEEEecCC--CccchhhhHHHHHHHHHHhc-CCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcC
Q 008845 180 KTIGLYFSMSS--YKASAEFTPRLVEVYEKLKG-KGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFE 256 (551)
Q Consensus 180 k~v~l~f~~~~--~~~c~~~~~~~~~~~~~~~~-~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~ 256 (551)
++|.+.|+++| |++|+.+.+.+.++++.... ++.+ .+.|+.+|.+. .+.+++.||
T Consensus 26 ~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~-~v~~~~vd~d~---------------------~~~~~~~~g 83 (243)
T 2hls_A 26 NPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGK-LLKLNVYYRES---------------------DSDKFSEFK 83 (243)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEE-SEEEEEEETTT---------------------THHHHHHTT
T ss_pred CCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCc-eeEEEEecCCc---------------------CHHHHHhcC
Confidence 56777788899 99999999999998876321 1211 13444444433 457899999
Q ss_pred cCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCeeeccc
Q 008845 257 LSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKVPVSD 336 (551)
Q Consensus 257 v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v~l~~ 336 (551)
|+++||+++++ | ... ..|.. +...+..+.......... .+ .++.+ ..-.+.+
T Consensus 84 v~~~Pt~~i~~--g-~~~--------~~G~~----~~~~l~~fv~~~l~~~~~----------~~--~l~~~-~~~~~~~ 135 (243)
T 2hls_A 84 VERVPTVAFLG--G-EVR--------WTGIP----AGEEIRALVEVIMRLSED----------ES--GLEDA-TKEALKS 135 (243)
T ss_dssp CCSSSEEEETT--T-TEE--------EESCC----CTTHHHHHHHHHHHHHTT----------CC--CCCHH-HHHHHHH
T ss_pred CCcCCEEEEEC--C-cee--------EcCCC----cHHHHHHHHHHHHhccCC----------CC--CCCHH-HHHHHHH
Confidence 99999999983 3 111 11211 234455554432211000 00 00000 0001234
Q ss_pred CCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 337 LAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER-NESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 337 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
+.++++++.|||+|||+|+.+.|.|++++..++.. ..++.+..|+++..+ .+++.|
T Consensus 136 ~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~-----------------------~~~~~~ 192 (243)
T 2hls_A 136 LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP-----------------------DIADKY 192 (243)
T ss_dssp CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH-----------------------HHHHHT
T ss_pred cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH-----------------------HHHHHc
Confidence 56889999999999999999999999999988521 125888888877654 578899
Q ss_pred CCCCcceEEEECCCCcEEEc
Q 008845 416 KVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 416 ~v~~~P~~~lid~~G~i~~~ 435 (551)
+|+++||+++ +|++++.
T Consensus 193 ~V~~vPt~~i---~G~~~~~ 209 (243)
T 2hls_A 193 GVMSVPSIAI---NGYLVFV 209 (243)
T ss_dssp TCCSSSEEEE---TTEEEEE
T ss_pred CCeeeCeEEE---CCEEEEe
Confidence 9999999988 7887644
No 60
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.77 E-value=1.2e-18 Score=161.61 Aligned_cols=142 Identities=13% Similarity=0.251 Sum_probs=115.2
Q ss_pred Ccccee--cCCCCeeecccCCCC-EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChHHH
Q 008845 320 DLDFVV--GKNGGKVPVSDLAGK-TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSF 389 (551)
Q Consensus 320 ~~~f~~--~~~g~~v~l~~~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d-------~~~~~~ 389 (551)
.|+|.+ +.+|+.+++++++|| ++||+||++||++|+.++|.|++++++++++ ++.|+.|++| .+.+.+
T Consensus 24 ~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~d~~~~~ 101 (196)
T 2ywi_A 24 APPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK--GVSFVAINSNDAEQYPEDSPENM 101 (196)
T ss_dssp CCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEECSCTTTCGGGSHHHH
T ss_pred CCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCccccccccCHHHH
Confidence 478865 689999999999998 5999999999999999999999999999875 6999999997 467888
Q ss_pred HHHHhcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhh--hcCCCCCCCCHHHHHHHHHHHHHHh
Q 008845 390 DEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIA--VHGAEAYPFTEERMKEIDGQYNEMA 467 (551)
Q Consensus 390 ~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~--~~g~~~~p~~~~~~~~l~~~l~~~~ 467 (551)
++|+++++ +.+|+..|....+++.|++.++|+++|||++|+++++....... ..| +. ..++|.+.|++++
T Consensus 102 ~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g----~~---~~~~l~~~i~~ll 173 (196)
T 2ywi_A 102 KKVAEELG-YPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGI----PV---TGESIRAALDALL 173 (196)
T ss_dssp HHHHHHHT-CCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCC----CC---CCHHHHHHHHHHH
T ss_pred HHHHHHcC-CCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccC----cc---CHHHHHHHHHHHH
Confidence 99999887 57888888888999999999999999999999999874321100 001 11 2356777787777
Q ss_pred ccCC
Q 008845 468 KGWP 471 (551)
Q Consensus 468 ~~~~ 471 (551)
++.+
T Consensus 174 ~~~~ 177 (196)
T 2ywi_A 174 EGRP 177 (196)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 6544
No 61
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.77 E-value=1.6e-18 Score=160.15 Aligned_cols=136 Identities=21% Similarity=0.249 Sum_probs=114.7
Q ss_pred CCcccee-cC--CC--CeeecccC-CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHH
Q 008845 319 GDLDFVV-GK--NG--GKVPVSDL-AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 391 (551)
Q Consensus 319 ~~~~f~~-~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~ 391 (551)
..|+|.+ +. +| +.++++++ +||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++| +.+..++
T Consensus 5 ~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~Is~d-~~~~~~~ 81 (192)
T 2h01_A 5 QAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER--NVELLGCSVD-SKFTHLA 81 (192)
T ss_dssp BCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT--TEEEEEEESS-CHHHHHH
T ss_pred cCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEEeC-CHHHHHH
Confidence 3588988 77 89 99999999 9999999999 999999999999999999999865 6999999998 4577888
Q ss_pred HHhcCC------CcccccCchhhHHHHHhcCCC-----CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHH
Q 008845 392 FFKGMP------WLALPFGDARKASLSRKFKVS-----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 460 (551)
Q Consensus 392 ~~~~~~------~~~~~~~~d~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 460 (551)
|.+.+. .+.+|+..|....+++.|++. .+|+++|||++|+|+++..+.. ..+...++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~----------~~~~~~~~l~ 151 (192)
T 2h01_A 82 WKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNL----------ALGRSVDEIL 151 (192)
T ss_dssp HHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGG----------SSGGGHHHHH
T ss_pred HHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCC----------CCCCCHHHHH
Confidence 888772 477888888888999999999 8999999999999999854321 1234567777
Q ss_pred HHHHHHh
Q 008845 461 GQYNEMA 467 (551)
Q Consensus 461 ~~l~~~~ 467 (551)
+.|+++.
T Consensus 152 ~~l~~l~ 158 (192)
T 2h01_A 152 RLIDALQ 158 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777665
No 62
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.77 E-value=1e-18 Score=160.53 Aligned_cols=136 Identities=14% Similarity=0.186 Sum_probs=110.8
Q ss_pred CCcccee-cC-CC--CeeecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHH
Q 008845 319 GDLDFVV-GK-NG--GKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 393 (551)
Q Consensus 319 ~~~~f~~-~~-~g--~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 393 (551)
..|+|.+ +. +| +.+++++++||++||+||+ +||++|+.++|.|++++++++++ +++||+|++|. .+..++|+
T Consensus 6 ~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~--~v~vv~Is~d~-~~~~~~~~ 82 (186)
T 1n8j_A 6 KIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL--GVDVYSVSTDT-HFTHKAWH 82 (186)
T ss_dssp BCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT--TEEEEEEESSC-HHHHHHHH
T ss_pred cCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHHH
Confidence 4589988 77 58 8999999999999999995 99999999999999999999875 69999999984 56788898
Q ss_pred hcCC---CcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHH
Q 008845 394 KGMP---WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYN 464 (551)
Q Consensus 394 ~~~~---~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~ 464 (551)
++++ .+.+|+..|....+++.|++. .+|++||||++|+|+++..+.. . .....++|.+.|+
T Consensus 83 ~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~-------~---~~~~~~~l~~~l~ 152 (186)
T 1n8j_A 83 SSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAE-------G---IGRDASDLLRKIK 152 (186)
T ss_dssp HHCTTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T---BCCCHHHHHHHHH
T ss_pred HHcCcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecCC-------C---CCCCHHHHHHHHH
Confidence 8872 367888888888999999997 3799999999999999854321 0 1113455666666
Q ss_pred HHh
Q 008845 465 EMA 467 (551)
Q Consensus 465 ~~~ 467 (551)
.+.
T Consensus 153 ~l~ 155 (186)
T 1n8j_A 153 AAQ 155 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 63
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.77 E-value=4.5e-18 Score=149.27 Aligned_cols=123 Identities=40% Similarity=0.790 Sum_probs=104.9
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+| .+++++++|| ++|+||++||++|+.++|.|.+++++++...++.+++|++|.+.+.+++|++++++..+++...+
T Consensus 17 ~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ 95 (144)
T 1o73_A 17 KSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRS 95 (144)
T ss_dssp TTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHH
T ss_pred CCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchh
Confidence 357 9999999999 99999999999999999999999999984336999999999999999999999998888877655
Q ss_pred hHHHHHhhcCCCCCcEEEEEc-CCCeEEEcCcchhhhhc-CCCCCCc
Q 008845 87 TRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEIIREY-GVEGYPF 131 (551)
Q Consensus 87 ~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~~-~~~~~~~ 131 (551)
....+.+.|++.++|+++++| ++|+++.+.+...+... ....+||
T Consensus 96 ~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W 142 (144)
T 1o73_A 96 TVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPW 142 (144)
T ss_dssp HHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTC
T ss_pred HHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCC
Confidence 556799999999999999999 89999998776655433 3344444
No 64
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.77 E-value=1.5e-18 Score=162.93 Aligned_cols=136 Identities=18% Similarity=0.212 Sum_probs=113.7
Q ss_pred CCcccee-cC--CC--CeeecccC-CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHH
Q 008845 319 GDLDFVV-GK--NG--GKVPVSDL-AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 391 (551)
Q Consensus 319 ~~~~f~~-~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~ 391 (551)
..|+|.+ +. +| +.++++++ +||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++| +.+..++
T Consensus 26 ~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~D-~~~~~~~ 102 (213)
T 2i81_A 26 EAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER--NVELLGCSVD-SKYTHLA 102 (213)
T ss_dssp BCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT--TEEEEEEESS-CHHHHHH
T ss_pred cCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCC-CHHHHHH
Confidence 4589988 77 89 89999999 9999999999 999999999999999999999865 6999999998 5577888
Q ss_pred HHhcCC------CcccccCchhhHHHHHhcCCC-----CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHH
Q 008845 392 FFKGMP------WLALPFGDARKASLSRKFKVS-----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 460 (551)
Q Consensus 392 ~~~~~~------~~~~~~~~d~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 460 (551)
|++.+. .+.+|+..|....+++.|++. .+|++||||++|+|+++..+.. ......++|.
T Consensus 103 ~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~----------~~~~~~~ell 172 (213)
T 2i81_A 103 WKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNL----------AIGRSVDEIL 172 (213)
T ss_dssp HHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECT----------TCCCCHHHHH
T ss_pred HHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCEEEEEEecCC----------CCCCCHHHHH
Confidence 888772 478899889889999999999 8999999999999999853321 1123456667
Q ss_pred HHHHHHh
Q 008845 461 GQYNEMA 467 (551)
Q Consensus 461 ~~l~~~~ 467 (551)
+.|+.+.
T Consensus 173 ~~l~~l~ 179 (213)
T 2i81_A 173 RIIDAIQ 179 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 65
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.77 E-value=9e-17 Score=163.77 Aligned_cols=279 Identities=13% Similarity=0.131 Sum_probs=170.3
Q ss_pred Cc-EEEEEecCCCHhhHhhh------HHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHH
Q 008845 20 GK-IGLYFSASWCGPCQRFT------PILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLD 92 (551)
Q Consensus 20 gk-vlv~F~a~wC~~C~~~~------p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (551)
++ ++|+||||||+||+... |.++++++.++.. ++.++.|+++... .++
T Consensus 30 ~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~-~v~~~~Vd~~~~~------------------------~l~ 84 (367)
T 3us3_A 30 YEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK-GVGFGLVDSEKDA------------------------AVA 84 (367)
T ss_dssp CSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTTH------------------------HHH
T ss_pred CCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC-CceEEEEeCcccH------------------------HHH
Confidence 56 99999999999974332 6899999999754 4888998888664 499
Q ss_pred hhcCCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCcee
Q 008845 93 ELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKI 172 (551)
Q Consensus 93 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 172 (551)
++|+|+++||++++ ++|+++...| +.+.+.|.+++.... ......+......+-++
T Consensus 85 ~~~~V~~~PTl~~f-~~G~~~~y~G------------~~~~~~i~~~i~~~~----~~~v~~i~~~~~~~~~~------- 140 (367)
T 3us3_A 85 KKLGLTEEDSIYVF-KEDEVIEYDG------------EFSADTLVEFLLDVL----EDPVELIEGERELQAFE------- 140 (367)
T ss_dssp HHHTCCSTTEEEEE-ETTEEEECCS------------CCSHHHHHHHHHHHH----SCSEEECCSHHHHHHHH-------
T ss_pred HHcCCCcCceEEEE-ECCcEEEeCC------------CCCHHHHHHHHHHhc----CCCcEEcCCHHHHHHHh-------
Confidence 99999999999999 5787754322 134555555553321 11111110000000000
Q ss_pred eccccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHH
Q 008845 173 SVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLA 252 (551)
Q Consensus 173 ~~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~ 252 (551)
..+.+.+++.|+.++| ....+.+.+++..+++. +.|+.... ..++
T Consensus 141 ---~~~~~~~vv~ff~~~~---~~~~~~f~~~A~~~~~~-----~~F~~~~~------------------------~~~~ 185 (367)
T 3us3_A 141 ---NIEDEIKLIGYFKNKD---SEHYKAFKEAAEEFHPY-----IPFFATFD------------------------SKVA 185 (367)
T ss_dssp ---HCCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTT-----SCEEEECC------------------------HHHH
T ss_pred ---ccCCCcEEEEEECCCC---chHHHHHHHHHHhhcCC-----cEEEEECC------------------------HHHH
Confidence 0022445666666664 45677888889888764 33433322 2567
Q ss_pred hhcCcCCcceEEEECCCC--CcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCC
Q 008845 253 RYFELSTLPTLVIIGPDG--KTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGG 330 (551)
Q Consensus 253 ~~f~v~~~P~lvi~~~~g--k~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~ 330 (551)
+.|+++. |+|+++.... ...+.+ -+++.+.+..++..... |- +...+..
T Consensus 186 ~~~~v~~-p~i~lf~~~~~~~~~y~g------------~~~~~~~l~~fi~~~~~---------------p~-v~elt~~ 236 (367)
T 3us3_A 186 KKLTLKL-NEIDFYEAFMEEPVTIPD------------KPNSEEEIVNFVEEHRR---------------ST-LRKLKPE 236 (367)
T ss_dssp HHHTCCT-TCEEEECTTCSSCEECSS------------SSCCHHHHHHHHHHTCS---------------CS-EEECCGG
T ss_pred HHcCCCC-CeEEEEcCCCCCCeecCC------------CCCCHHHHHHHHHHcCc---------------cc-eeecChh
Confidence 7889885 9999997532 222211 13567777777653211 11 1111111
Q ss_pred ee-e-cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhh
Q 008845 331 KV-P-VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARK 408 (551)
Q Consensus 331 ~v-~-l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~ 408 (551)
.. . +.+-..++.+|.|+..+|+.+....+.|.+++++++++ ..+.+++|+.+..+.. .
T Consensus 237 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~-~ki~F~~id~~~~~~~-------------------l 296 (367)
T 3us3_A 237 SMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDN-PDLSIIWIDPDDFPLL-------------------V 296 (367)
T ss_dssp GHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTC-TTCCEEEECGGGCTTT-------------------H
T ss_pred hHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCC-CceEEEEECCccchhH-------------------H
Confidence 11 1 11101345667799999999999999999999999863 1377787776543210 0
Q ss_pred HHHHHhcCCC-CcceEEEECCCCc
Q 008845 409 ASLSRKFKVS-GIPMLVAIGPSGR 431 (551)
Q Consensus 409 ~~l~~~~~v~-~~P~~~lid~~G~ 431 (551)
..+.+.||+. .+|.+++++....
T Consensus 297 ~~~~~~fgl~~~~P~~~i~~~~~~ 320 (367)
T 3us3_A 297 PYWEKTFDIDLSAPQIGVVNVTDA 320 (367)
T ss_dssp HHHHHHHTCCTTSCEEEEEETTTC
T ss_pred HHHHHhcCCCCCCCeEEEEecccc
Confidence 1235568887 8999999986543
No 66
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.77 E-value=5.5e-19 Score=159.46 Aligned_cols=135 Identities=14% Similarity=0.128 Sum_probs=111.6
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCC-ChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHW-CPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|+.+++++++||+++|+||++| |++|+.++|.|+++++++ . ++++++|++|. ++.+++|++++
T Consensus 23 ~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~---~~~vv~is~d~-~~~~~~~~~~~ 97 (167)
T 2jsy_A 23 QAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G---DVNVYTISADL-PFAQARWCGAN 97 (167)
T ss_dssp CCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S---SCEEEEEECSS-GGGTSCCGGGS
T ss_pred cCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C---CCEEEEEECCC-HHHHHHHHHhc
Confidence 3589988 9999999999999999999999999 999999999999999999 3 59999999984 46778888888
Q ss_pred CCcccccCch-hhHHHHHhcCCCC------cceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHh
Q 008845 397 PWLALPFGDA-RKASLSRKFKVSG------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMA 467 (551)
Q Consensus 397 ~~~~~~~~~d-~~~~l~~~~~v~~------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~ 467 (551)
++..+|+..| ....+.+.|++.. +|+++|||++|+|+++..+... ....+.+++.+.|++++
T Consensus 98 ~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~---------~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 98 GIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEA---------TNHPNYEKPIEAAKALV 166 (167)
T ss_dssp SCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBT---------TSCCCSHHHHHHHHHHH
T ss_pred CCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCc---------CCCCCHHHHHHHHHHhh
Confidence 7548888888 7889999999987 4999999999999998543211 12223456677777665
No 67
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.77 E-value=2.4e-18 Score=150.80 Aligned_cols=107 Identities=20% Similarity=0.237 Sum_probs=96.6
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHH---HHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAE---VYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 83 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~---~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 83 (551)
.+|+.+++++++|| +||+|||+||++|+.++|.|.+ +++++++. ++.+++|+.|.+.+.+++++++++..++...
T Consensus 19 ~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~-~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~ 97 (142)
T 3eur_A 19 DSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK-KLKVLSIYPDEELDEWKKHRNDFAKEWTNGY 97 (142)
T ss_dssp TTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT-SEEEEEEECSSCHHHHHHHGGGSCTTSEEEE
T ss_pred CCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC-CeEEEEEEcCCCHHHHHHHHHhccccccccc
Confidence 57899999999999 9999999999999999999999 99999876 5999999999999999999999987776666
Q ss_pred ChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 84 DSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+......+.+.|++.++|+++++|++|+|+.+
T Consensus 98 d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (142)
T 3eur_A 98 DKELVIKNKNLYDLRAIPTLYLLDKNKTVLLK 129 (142)
T ss_dssp CTTCHHHHTTCSCCTTCSEEEEECTTCBEEEE
T ss_pred CccchhhhhhhcCCCcCCeEEEECCCCcEEec
Confidence 66554457899999999999999999999985
No 68
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.77 E-value=6.9e-18 Score=160.16 Aligned_cols=183 Identities=14% Similarity=0.210 Sum_probs=116.9
Q ss_pred ccCCCc-EEEEEecC-CCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 16 DSLKGK-IGLYFSAS-WCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~-wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
+...++ ++++||++ ||++|+.+.|.|.++++. . +++.++.|+++.... ..+++
T Consensus 18 ~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~--~~v~~~~vd~~~~~~----------------------~~~~~ 72 (226)
T 1a8l_A 18 SKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T--DKLSYEIVDFDTPEG----------------------KELAK 72 (226)
T ss_dssp GGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C--TTEEEEEEETTSHHH----------------------HHHHH
T ss_pred HhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C--CceEEEEEeCCCccc----------------------HHHHH
Confidence 445567 88999999 999999999999998854 2 368899998885212 45899
Q ss_pred hcCCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCceee
Q 008845 94 LFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKIS 173 (551)
Q Consensus 94 ~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 173 (551)
.|+|.++|+++++ ++|+... .+..|.. ....+..++......... .. ..+++.+.
T Consensus 73 ~~~v~~~Pt~~~~-~~g~~~~------~~~~G~~----~~~~l~~~l~~~l~~~~~--~~------------~l~~~~~~ 127 (226)
T 1a8l_A 73 RYRIDRAPATTIT-QDGKDFG------VRYFGLP----AGHEFAAFLEDIVDVSRE--ET------------NLMDETKQ 127 (226)
T ss_dssp HTTCCSSSEEEEE-ETTBCCS------EEEESCC----CTTHHHHHHHHHHHHHHT--CC------------CCCHHHHH
T ss_pred HcCCCcCceEEEE-cCCceee------EEEeccC----cHHHHHHHHHHHHhhcCC--CC------------CCCHHHHH
Confidence 9999999999999 5564210 0112221 112233333221110000 00 00000000
Q ss_pred -ccccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCC-CceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHH
Q 008845 174 -VSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKG-ESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKL 251 (551)
Q Consensus 174 -~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~-~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l 251 (551)
+....++.+++.|+++||++|+.+.|.+.+++..+..++ .+ +.++.+|.+. ...+
T Consensus 128 ~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~--v~~~~vd~~~---------------------~~~l 184 (226)
T 1a8l_A 128 AIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGK--ILGDMVEAIE---------------------YPEW 184 (226)
T ss_dssp HHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCC--EEEEEEEGGG---------------------CHHH
T ss_pred HHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCc--EEEEEEEccc---------------------CHHH
Confidence 111234555999999999999999999999999887321 13 4444444433 4578
Q ss_pred HhhcCcCCcceEEEECCCCCc
Q 008845 252 ARYFELSTLPTLVIIGPDGKT 272 (551)
Q Consensus 252 ~~~f~v~~~P~lvi~~~~gk~ 272 (551)
++.|+|.++||++++. +|+.
T Consensus 185 ~~~~~v~~~Pt~~~~~-~G~~ 204 (226)
T 1a8l_A 185 ADQYNVMAVPKIVIQV-NGED 204 (226)
T ss_dssp HHHTTCCSSCEEEEEE-TTEE
T ss_pred HHhCCCcccCeEEEEe-CCce
Confidence 8999999999998884 5543
No 69
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.77 E-value=1.5e-18 Score=155.95 Aligned_cols=109 Identities=20% Similarity=0.357 Sum_probs=98.3
Q ss_pred cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-----CChHHHHHHHhcCCCcc
Q 008845 326 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-----RDQTSFDEFFKGMPWLA 400 (551)
Q Consensus 326 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d-----~~~~~~~~~~~~~~~~~ 400 (551)
+.+|+.+++++++||++||+||++||++|+.++|.|.+++++++.. ++.||+|++| .+.+.+.+|+..+++..
T Consensus 25 ~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (164)
T 2h30_A 25 TADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS--SANLITVASPGFLHEKKDGEFQKWYAGLNYPK 102 (164)
T ss_dssp ETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT--TSEEEEEECTTSTTCCCTTHHHHHHTTSCCTT
T ss_pred CCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC--CcEEEEEEcCCCccccCHHHHHHHHHhCCCCc
Confidence 8899999999999999999999999999999999999999998765 6999999985 34578889998888666
Q ss_pred cccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcc
Q 008845 401 LPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 401 ~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 436 (551)
+++..|....+++.|+|.++|+++|||++|+++.+.
T Consensus 103 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 138 (164)
T 2h30_A 103 LPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIV 138 (164)
T ss_dssp SCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEE
T ss_pred ceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEE
Confidence 888888888999999999999999999999999874
No 70
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.77 E-value=1.1e-18 Score=156.88 Aligned_cols=133 Identities=13% Similarity=0.087 Sum_probs=108.3
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|+.+++++++||++||+||+ +||++|+.++|.|+++++++ . +++|++|++|. ++..++|.+++
T Consensus 21 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~---~v~vv~is~d~-~~~~~~~~~~~ 95 (163)
T 1psq_A 21 KALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D---NTVVLTVSMDL-PFAQKRWCGAE 95 (163)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T---TEEEEEEESSC-HHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CcEEEEEECCC-HHHHHHHHHhc
Confidence 3588988 99999999999999999999995 99999999999999999888 3 59999999984 57788898887
Q ss_pred CCcccccCch-hhHHHHHhcCCC----C--cceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHH
Q 008845 397 PWLALPFGDA-RKASLSRKFKVS----G--IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNE 465 (551)
Q Consensus 397 ~~~~~~~~~d-~~~~l~~~~~v~----~--~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~ 465 (551)
+.-.+|+..| ....+++.|++. + .|+++|||++|+|+++..+.. +....+.+++.+.|++
T Consensus 96 ~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~---------~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 96 GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDN---------INSEPNFEAAIAAAKA 162 (163)
T ss_dssp TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSB---------TTSCCCHHHHHHHHHH
T ss_pred CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCC---------cCCCCCHHHHHHHHHh
Confidence 7327888888 788999999997 4 399999999999999854321 1223344566666654
No 71
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.77 E-value=4.2e-18 Score=159.22 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=92.2
Q ss_pred CCcccee-cCC-CCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHH
Q 008845 319 GDLDFVV-GKN-GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSF 389 (551)
Q Consensus 319 ~~~~f~~-~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~ 389 (551)
..|+|.+ +.+ |+.+++++++||+|||+|||+|||+|+.++|.|++++++|+++ +++||+|++|. +.+.+
T Consensus 25 ~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~--g~~vv~v~~d~~~~~e~d~~~~i 102 (208)
T 2f8a_A 25 SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR--GLVVLGFPCNQFGHQENAKNEEI 102 (208)
T ss_dssp CGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTTTCSCHHHH
T ss_pred ccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC--CeEEEEEECCcccccCCCCHHHH
Confidence 3588988 888 9999999999999999999999999999999999999999876 69999999972 35778
Q ss_pred HHHHh------cCCCcccccCchh--h----H----HHHHhc-------------------------CCCCcceEEEECC
Q 008845 390 DEFFK------GMPWLALPFGDAR--K----A----SLSRKF-------------------------KVSGIPMLVAIGP 428 (551)
Q Consensus 390 ~~~~~------~~~~~~~~~~~d~--~----~----~l~~~~-------------------------~v~~~P~~~lid~ 428 (551)
++|++ +++ +.+|+..+. + . .+...+ ++.+.|++||||+
T Consensus 103 ~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~ 181 (208)
T 2f8a_A 103 LNSLKYVRPGGGFE-PNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGP 181 (208)
T ss_dssp HHHHHHTSSCTTCC-CSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECT
T ss_pred HHHHHhcccccccc-cceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcC
Confidence 88987 554 566655321 1 1 111111 3667799999999
Q ss_pred CCcEEEccc
Q 008845 429 SGRTITKEA 437 (551)
Q Consensus 429 ~G~i~~~~~ 437 (551)
+|+|+.+..
T Consensus 182 ~G~i~~~~~ 190 (208)
T 2f8a_A 182 DGVPLRRYS 190 (208)
T ss_dssp TSCEEEEEC
T ss_pred CCcEEEEeC
Confidence 999999843
No 72
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.77 E-value=8.3e-19 Score=158.97 Aligned_cols=114 Identities=17% Similarity=0.272 Sum_probs=85.7
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d-------~~~~~~~ 390 (551)
..|+|.+ +.+|+++++++++||++||+|||+||++|+ ++|.|++++++++++ ++.|++|++| .+.+.++
T Consensus 11 ~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~d~~~~~~ 87 (171)
T 3cmi_A 11 EFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE--GFTIIGFPCNQFGHQEPGSDEEIA 87 (171)
T ss_dssp GGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG--TEEEEEEEECSCC-----------
T ss_pred heeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC--CeEEEEEECcccCCCCCCCHHHHH
Confidence 3478988 999999999999999999999999999999 999999999999876 6999999986 3456788
Q ss_pred HHH-hcCCCcccccCchhh--HH----H-----HHhcCCCCcc------eEEEECCCCcEEEcc
Q 008845 391 EFF-KGMPWLALPFGDARK--AS----L-----SRKFKVSGIP------MLVAIGPSGRTITKE 436 (551)
Q Consensus 391 ~~~-~~~~~~~~~~~~d~~--~~----l-----~~~~~v~~~P------~~~lid~~G~i~~~~ 436 (551)
+|+ ++++ +.+|+..|.+ .. + .+.|++.++| +++|||++|+|+.+.
T Consensus 88 ~~~~~~~~-~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~ 150 (171)
T 3cmi_A 88 QFCQLNYG-VTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERY 150 (171)
T ss_dssp -------C-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEE
T ss_pred HHHHhccC-CCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEe
Confidence 888 6665 5677665321 11 1 2468999999 999999999999984
No 73
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.76 E-value=1.2e-18 Score=155.65 Aligned_cols=113 Identities=19% Similarity=0.431 Sum_probs=100.3
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 397 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 397 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.++++++++. ++.++.|++|. .++++++.++
T Consensus 20 ~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~---~~~~~~~~~~ 94 (158)
T 3hdc_A 20 LAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG--DLVVLAVNVEK---RFPEKYRRAP 94 (158)
T ss_dssp BCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT--SEEEEEEECSS---SCCGGGGGCC
T ss_pred cCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC--CeEEEEEeCCH---HHHHHHHHcC
Confidence 3488988 9999999999999999999999999999999999999999999754 69999999986 3556677666
Q ss_pred CcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEccc
Q 008845 398 WLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 398 ~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~ 437 (551)
+.+++..|....+.+.|+|.++|+++|||++|+++.+..
T Consensus 95 -~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 133 (158)
T 3hdc_A 95 -VSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVT 133 (158)
T ss_dssp -CSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEE
T ss_pred -CCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEe
Confidence 568888888889999999999999999999999999844
No 74
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.76 E-value=1.3e-17 Score=158.67 Aligned_cols=175 Identities=17% Similarity=0.157 Sum_probs=113.5
Q ss_pred CCcEEEEEE----ecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHh
Q 008845 178 EGKTIGLYF----SMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLAR 253 (551)
Q Consensus 178 ~gk~v~l~f----~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~ 253 (551)
+...++++| ..+||++|+.+.|.+.+++..+.+. .. +.++.+|.++ .+.+++
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~-~~--v~~~~vd~~~---------------------~~~l~~ 75 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ-DK--IKLDIYSPFT---------------------HKEETE 75 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT-TT--EEEEEECTTT---------------------CHHHHH
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC-Cc--eEEEEecCcc---------------------cHHHHH
Confidence 334455555 3788899999999999998888542 23 4455555543 568999
Q ss_pred hcCcCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCeee
Q 008845 254 YFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKVP 333 (551)
Q Consensus 254 ~f~v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v~ 333 (551)
.|+|+++||+++++. |+.... ..|. .+.+.+..+........ + +...+ +...+.
T Consensus 76 ~~~v~~~Ptl~~~~~-~~~~~~-------~~G~----~~~~~l~~~~~~~~~~~-----------~-~~~~l--~~~~~~ 129 (229)
T 2ywm_A 76 KYGVDRVPTIVIEGD-KDYGIR-------YIGL----PAGLEFTTLINGIFHVS-----------Q-RKPQL--SEKTLE 129 (229)
T ss_dssp HTTCCBSSEEEEESS-SCCCEE-------EESC----CCTTHHHHHHHHHHHHH-----------T-TCCSC--CHHHHH
T ss_pred HcCCCcCcEEEEECC-Ccccce-------ecCC----ccHHHHHHHHHHHHhcc-----------C-CccCC--CHHHHH
Confidence 999999999999963 322111 1121 12344444443221100 0 00001 001110
Q ss_pred -cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHH
Q 008845 334 -VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLS 412 (551)
Q Consensus 334 -l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~ 412 (551)
+....++.++++||++||++|+.+.|.+++++.++. ++.++.|+++..+ .++
T Consensus 130 ~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~----~v~~~~vd~~~~~-----------------------~l~ 182 (229)
T 2ywm_A 130 LLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND----YITSKVIDASENQ-----------------------DLA 182 (229)
T ss_dssp HHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEEGGGCH-----------------------HHH
T ss_pred HHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC----CeEEEEEECCCCH-----------------------HHH
Confidence 112235566999999999999999999999988872 4888888887654 589
Q ss_pred HhcCCCCcceEEEECCCCcE
Q 008845 413 RKFKVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 413 ~~~~v~~~P~~~lid~~G~i 432 (551)
+.|+|+++|++++ +|++
T Consensus 183 ~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 183 EQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp HHTTCCSSSEEEE---GGGT
T ss_pred HHcCCcccCEEEE---CCEE
Confidence 9999999999998 6774
No 75
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.76 E-value=4.2e-18 Score=156.72 Aligned_cols=117 Identities=22% Similarity=0.293 Sum_probs=104.4
Q ss_pred CCcccee-cCCCC----eeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHH
Q 008845 319 GDLDFVV-GKNGG----KVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 392 (551)
Q Consensus 319 ~~~~f~~-~~~g~----~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 392 (551)
..|+|.+ +.+|+ .+++++++||++||+|| ++||++|+.++|.|.+++++++++ +++|++|++|. .+..++|
T Consensus 6 ~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~-~~~~~~~ 82 (187)
T 1we0_A 6 EVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL--GVEVYSVSTDT-HFVHKAW 82 (187)
T ss_dssp BCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT--TEEEEEEESSC-HHHHHHH
T ss_pred cCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc--CCEEEEEECCC-HHHHHHH
Confidence 3588988 88888 99999999999999999 999999999999999999999875 69999999986 5778889
Q ss_pred HhcCC---CcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEcccc
Q 008845 393 FKGMP---WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEAR 438 (551)
Q Consensus 393 ~~~~~---~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~ 438 (551)
.+.+. .+.+|+..|....+++.|++. ++|+++|||++|+|+++..+
T Consensus 83 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g 137 (187)
T 1we0_A 83 HENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEIN 137 (187)
T ss_dssp HHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEec
Confidence 88873 367888888888999999999 99999999999999998543
No 76
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.76 E-value=2.9e-18 Score=154.97 Aligned_cols=116 Identities=18% Similarity=0.290 Sum_probs=94.9
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~~ 390 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ +++|++|++|. +.+.++
T Consensus 11 ~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~ 88 (170)
T 2p5q_A 11 SVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEEEPGTNDQIT 88 (170)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHHH
T ss_pred cccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCCCCCCHHHHH
Confidence 4588988 9999999999999999999999999999999999999999999876 69999999973 567888
Q ss_pred HHHh-cCCCcccccC--chhhHH----HH-----HhcCC--CCcc---eEEEECCCCcEEEccc
Q 008845 391 EFFK-GMPWLALPFG--DARKAS----LS-----RKFKV--SGIP---MLVAIGPSGRTITKEA 437 (551)
Q Consensus 391 ~~~~-~~~~~~~~~~--~d~~~~----l~-----~~~~v--~~~P---~~~lid~~G~i~~~~~ 437 (551)
+|++ .++ +.+|+. .|.++. +. ..+++ .++| +++|||++|+++.+..
T Consensus 89 ~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~ 151 (170)
T 2p5q_A 89 DFVCTRFK-SEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYY 151 (170)
T ss_dssp HHHHHHTC-CCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEEC
T ss_pred HHHHHhcC-CCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeC
Confidence 9988 555 456655 333322 22 12466 7788 9999999999999843
No 77
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=161.73 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=110.7
Q ss_pred CCcccee-cC---CCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHH
Q 008845 319 GDLDFVV-GK---NGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 393 (551)
Q Consensus 319 ~~~~f~~-~~---~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 393 (551)
..|+|.+ +. +|+.+++++++||++||+|| ++||++|+.++|.|++++++|+++ +++||+|++| +.+..++|+
T Consensus 24 ~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~--~v~vv~Is~D-~~~~~~~~~ 100 (211)
T 2pn8_A 24 PAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVD-SQFTHLAWI 100 (211)
T ss_dssp BCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESS-CHHHHHHHH
T ss_pred cCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECC-CHHHHHHHH
Confidence 4588987 53 46899999999999999999 999999999999999999999865 6999999997 456788898
Q ss_pred hcC----C--CcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHH
Q 008845 394 KGM----P--WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDG 461 (551)
Q Consensus 394 ~~~----~--~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~ 461 (551)
+.+ + .+.+|+..|....+++.|++. .+|++||||++|+|++...+.. ...+..+++.+
T Consensus 101 ~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~----------~~~~~~~ell~ 170 (211)
T 2pn8_A 101 NTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDL----------PVGRSVDETLR 170 (211)
T ss_dssp TSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT----------TBCCCHHHHHH
T ss_pred HHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCC----------CCCCCHHHHHH
Confidence 877 1 478888888888999999995 6999999999999999853221 01124566666
Q ss_pred HHHHHh
Q 008845 462 QYNEMA 467 (551)
Q Consensus 462 ~l~~~~ 467 (551)
.|+.+.
T Consensus 171 ~l~~l~ 176 (211)
T 2pn8_A 171 LVQAFQ 176 (211)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 666654
No 78
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.76 E-value=2.4e-18 Score=159.44 Aligned_cols=137 Identities=12% Similarity=0.133 Sum_probs=112.8
Q ss_pred CCcccee-cCC-------------C--CeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEe
Q 008845 319 GDLDFVV-GKN-------------G--GKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFIS 381 (551)
Q Consensus 319 ~~~~f~~-~~~-------------g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs 381 (551)
..|+|.+ +.+ | +.+++++++||++||+|| ++||++|+.++|.|.+++++++++ +++|++|+
T Consensus 9 ~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs 86 (195)
T 2bmx_A 9 QFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR--DAQILGVS 86 (195)
T ss_dssp BCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT--TEEEEEEE
T ss_pred cCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEE
Confidence 3478877 666 6 899999999999999999 999999999999999999999865 69999999
Q ss_pred CCCChHHHHHHHhcCC---CcccccCchhhHHHHHhcCCC-----CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCH
Q 008845 382 SDRDQTSFDEFFKGMP---WLALPFGDARKASLSRKFKVS-----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTE 453 (551)
Q Consensus 382 ~d~~~~~~~~~~~~~~---~~~~~~~~d~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 453 (551)
+|. .+..++|.+.+. .+.+|+..|....+++.|++. ++|+++|||++|+|+++..+.. . ..
T Consensus 87 ~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~-------~---~~ 155 (195)
T 2bmx_A 87 IDS-EFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAG-------S---VG 155 (195)
T ss_dssp SSC-HHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECT-------T---CC
T ss_pred CCC-HHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCC-------C---CC
Confidence 985 578888888772 367888888888999999999 9999999999999999854321 0 11
Q ss_pred HHHHHHHHHHHHHhc
Q 008845 454 ERMKEIDGQYNEMAK 468 (551)
Q Consensus 454 ~~~~~l~~~l~~~~~ 468 (551)
...++|.+.|+++..
T Consensus 156 ~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 156 RNVDEVLRVLDALQS 170 (195)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhh
Confidence 245667777777654
No 79
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.76 E-value=2.5e-18 Score=155.24 Aligned_cols=116 Identities=12% Similarity=0.180 Sum_probs=92.7
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~~ 390 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ +++|++|++|. +.+.++
T Consensus 10 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~ 87 (169)
T 2v1m_A 10 SIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK--GLRILAFPCNQFGGQEPWAEAEIK 87 (169)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHH
T ss_pred ccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC--CeEEEEEECCccCCCCCCCHHHHH
Confidence 3588988 9999999999999999999999999999999999999999999875 69999999973 457788
Q ss_pred HH-HhcCCCcccccCc--hhhHHH----HH-----hcC-----CCCcceEEEECCCCcEEEccc
Q 008845 391 EF-FKGMPWLALPFGD--ARKASL----SR-----KFK-----VSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 391 ~~-~~~~~~~~~~~~~--d~~~~l----~~-----~~~-----v~~~P~~~lid~~G~i~~~~~ 437 (551)
+| .++++ +.+|+.. |.++.+ .+ .++ ++++|+++|||++|+++.+..
T Consensus 88 ~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~ 150 (169)
T 2v1m_A 88 KFVTEKYG-VQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYS 150 (169)
T ss_dssp HHHHHHHC-CCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEEC
T ss_pred HHHHHhcC-CCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcC
Confidence 88 47665 4556553 322221 11 125 556799999999999999843
No 80
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.76 E-value=3.1e-18 Score=159.62 Aligned_cols=136 Identities=18% Similarity=0.225 Sum_probs=112.0
Q ss_pred CCcccee-cC--CC--CeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHH
Q 008845 319 GDLDFVV-GK--NG--GKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 392 (551)
Q Consensus 319 ~~~~f~~-~~--~g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 392 (551)
..|+|.+ +. +| +.+++++++||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++|. .+..++|
T Consensus 11 ~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~--~v~vi~Is~D~-~~~~~~~ 87 (202)
T 1uul_A 11 PAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI--GCEVLACSMDS-EYSHLAW 87 (202)
T ss_dssp BCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHHHHH
T ss_pred cCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC--CCEEEEEeCCC-HHHHHHH
Confidence 4589988 65 68 899999999999999999 999999999999999999999864 69999999984 5678888
Q ss_pred HhcC----C--CcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHH
Q 008845 393 FKGM----P--WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 460 (551)
Q Consensus 393 ~~~~----~--~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 460 (551)
++.+ + .+.+|+..|....+++.|++. ++|+++|||++|+|+++..+.. . .+...++|.
T Consensus 88 ~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~-------~---~~~~~~ell 157 (202)
T 1uul_A 88 TSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDL-------P---VGRDVDEAL 157 (202)
T ss_dssp HHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T---BCCCHHHHH
T ss_pred HHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCC-------C---CCCCHHHHH
Confidence 8876 1 478888888888999999999 9999999999999999853321 1 112445666
Q ss_pred HHHHHHh
Q 008845 461 GQYNEMA 467 (551)
Q Consensus 461 ~~l~~~~ 467 (551)
+.|+++.
T Consensus 158 ~~l~~l~ 164 (202)
T 1uul_A 158 RLVKAFQ 164 (202)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 6666654
No 81
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.76 E-value=3e-18 Score=159.26 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=112.6
Q ss_pred CCcccee-cC--CCC---eeecccC-CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHH
Q 008845 319 GDLDFVV-GK--NGG---KVPVSDL-AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~--~g~---~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~ 390 (551)
..|+|.+ +. +|+ .++++++ +||++||+|| ++||++|+.++|.|.+++++++++ +++|++|++|. .+..+
T Consensus 6 ~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~-~~~~~ 82 (198)
T 1zof_A 6 LAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK--GFNVIGVSIDS-EQVHF 82 (198)
T ss_dssp BCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT--TEEEEEEESSC-HHHHH
T ss_pred cCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEECCC-HHHHH
Confidence 4589988 77 898 9999999 9999999999 999999999999999999999875 69999999985 57788
Q ss_pred HHHhcC------CCcccccCchhhHHHHHhcCCC-----CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHH
Q 008845 391 EFFKGM------PWLALPFGDARKASLSRKFKVS-----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEI 459 (551)
Q Consensus 391 ~~~~~~------~~~~~~~~~d~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l 459 (551)
+|.+.+ ..+.+|+..|....+++.|++. ++|+++|||++|+|+.+..+.. -.....++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~----------~~~~~~~~l 152 (198)
T 1zof_A 83 AWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDL----------PLGRNADEM 152 (198)
T ss_dssp HHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESS----------SCCCHHHHH
T ss_pred HHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCC----------CCCCCHHHH
Confidence 888872 2367888888888999999999 9999999999999999853321 012245666
Q ss_pred HHHHHHHh
Q 008845 460 DGQYNEMA 467 (551)
Q Consensus 460 ~~~l~~~~ 467 (551)
.+.|+++.
T Consensus 153 ~~~l~~l~ 160 (198)
T 1zof_A 153 LRMVDALL 160 (198)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776655
No 82
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.76 E-value=2.3e-18 Score=158.91 Aligned_cols=134 Identities=16% Similarity=0.237 Sum_probs=105.5
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~~ 390 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ +++||+|++|. +.+.++
T Consensus 27 ~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~ 104 (190)
T 2vup_A 27 SIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPCNQFGGQEPGNEEEIK 104 (190)
T ss_dssp SGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TCEEEEEECCCSTTCCCSCHHHHH
T ss_pred cccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC--CeEEEEEEcCccCCCCCCCHHHHH
Confidence 3478988 9999999999999999999999999999999999999999999876 69999999984 677888
Q ss_pred HHH-hcCCCcccccCc--hhhHH----HH-----HhcCCCCcc------eEEEECCCCcEEEcccchhhhhcCCCCCCCC
Q 008845 391 EFF-KGMPWLALPFGD--ARKAS----LS-----RKFKVSGIP------MLVAIGPSGRTITKEARDMIAVHGAEAYPFT 452 (551)
Q Consensus 391 ~~~-~~~~~~~~~~~~--d~~~~----l~-----~~~~v~~~P------~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~ 452 (551)
+|+ ++++ +.+|+.. |.... +. +.|++.++| +++|||++|+++.+..+. ..
T Consensus 105 ~~~~~~~~-~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~-----------~~ 172 (190)
T 2vup_A 105 EFVCTKFK-AEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPG-----------AS 172 (190)
T ss_dssp HHHHHHHC-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTT-----------CC
T ss_pred HHHHHhcC-CCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCC-----------CC
Confidence 998 6665 4566553 32222 21 346899999 999999999999874321 11
Q ss_pred HHHHHHHHHHHHHHhcc
Q 008845 453 EERMKEIDGQYNEMAKG 469 (551)
Q Consensus 453 ~~~~~~l~~~l~~~~~~ 469 (551)
.++|.+.|+++++.
T Consensus 173 ---~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 173 ---VKDIEKKLIPLLES 186 (190)
T ss_dssp ---HHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHhh
Confidence 24567777777653
No 83
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.76 E-value=1.2e-18 Score=159.55 Aligned_cols=115 Identities=14% Similarity=0.201 Sum_probs=94.8
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~~ 390 (551)
..|+|.+ +.+|+++++++++||++||+||++||++|++++|.|++++++++++ +++|++|++|. +.+.++
T Consensus 28 ~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~ 105 (181)
T 2p31_A 28 DFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQEPDSNKEIE 105 (181)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHH
T ss_pred ccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCCCCCCHHHHH
Confidence 3588988 9999999999999999999999999999999999999999999876 69999999974 567888
Q ss_pred HHHhc-CCCcccccCc--hhhHHHH---HhcCCCCcc-------eEEEECCCCcEEEcc
Q 008845 391 EFFKG-MPWLALPFGD--ARKASLS---RKFKVSGIP-------MLVAIGPSGRTITKE 436 (551)
Q Consensus 391 ~~~~~-~~~~~~~~~~--d~~~~l~---~~~~v~~~P-------~~~lid~~G~i~~~~ 436 (551)
+|+++ ++ +.+|+.. |.++... -.|++.++| +++|||++|+|+.+.
T Consensus 106 ~~~~~~~~-~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~ 163 (181)
T 2p31_A 106 SFARRTYS-VSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAW 163 (181)
T ss_dssp HHHHHHHC-CCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEE
T ss_pred HHHHhhcC-CCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEe
Confidence 99887 65 5667653 2222111 134577788 999999999999884
No 84
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=156.54 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=100.8
Q ss_pred CCcccee-cCC-CCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHH
Q 008845 319 GDLDFVV-GKN-GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSF 389 (551)
Q Consensus 319 ~~~~f~~-~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~ 389 (551)
..|+|.+ +.+ |+.++|++++||+|||+|||+||++|+ ++|.|++++++|+++ +++||+|++|. +.+++
T Consensus 34 ~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~--g~~Vlgvs~d~f~~~e~~~~~~i 110 (215)
T 2i3y_A 34 TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPY--GLVVLGFPCNQFGKQEPGDNKEI 110 (215)
T ss_dssp CGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHH
T ss_pred CcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC--CeEEEEEEccccCcCCCCCHHHH
Confidence 4589988 999 999999999999999999999999999 999999999999876 69999999762 35678
Q ss_pred HHHHh------cCCCcccccCchh--hH----H----HHHh-------c--------------CCCCcceEEEECCCCcE
Q 008845 390 DEFFK------GMPWLALPFGDAR--KA----S----LSRK-------F--------------KVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 390 ~~~~~------~~~~~~~~~~~d~--~~----~----l~~~-------~--------------~v~~~P~~~lid~~G~i 432 (551)
++|++ +++ +.+|+..+. ++ . +... + .|...|+.||||++|+|
T Consensus 111 ~~f~~~~~~~~~~~-~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~v 189 (215)
T 2i3y_A 111 LPGLKYVRPGGGFV-PSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIP 189 (215)
T ss_dssp HHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCE
T ss_pred HHHHHhccchhccC-ccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeE
Confidence 88988 665 677766431 11 1 2111 1 12334899999999999
Q ss_pred EEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 433 ITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 433 ~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
+.+..+. .. .++|++.|+++++.
T Consensus 190 v~~~~g~-----------~~---~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 190 VMRWSHR-----------AT---VSSVKTDILAYLKQ 212 (215)
T ss_dssp EEEECTT-----------SC---HHHHHHHHHHHGGG
T ss_pred EEEeCCC-----------CC---HHHHHHHHHHHHHH
Confidence 9884321 11 25677778877754
No 85
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.75 E-value=5.8e-18 Score=153.20 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=109.3
Q ss_pred CCc-ccee-cCCCCeeecccCCCCEEEEEEecCCCh-hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC--CChHHHHHHH
Q 008845 319 GDL-DFVV-GKNGGKVPVSDLAGKTILLYFSAHWCP-PCRAFLPKLIDAYKKIKERNESLEVVFISSD--RDQTSFDEFF 393 (551)
Q Consensus 319 ~~~-~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d--~~~~~~~~~~ 393 (551)
..| +|.+ +.+|+++++++++||++||+||++||+ +|..+++.|++++++++....++++|+|++| .+++.+++|+
T Consensus 6 ~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~ 85 (170)
T 3me7_A 6 YVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQ 85 (170)
T ss_dssp BCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHH
T ss_pred cCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHH
Confidence 357 9988 999999999999999999999999998 6999999999999999754456999999998 4678889999
Q ss_pred hcCCC--ccccc----CchhhHHHHHhcCC---------CCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHH
Q 008845 394 KGMPW--LALPF----GDARKASLSRKFKV---------SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKE 458 (551)
Q Consensus 394 ~~~~~--~~~~~----~~d~~~~l~~~~~v---------~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~ 458 (551)
++++. ..+++ ..+....+++.||+ ...|+++|||++|+|+... +|.. . ..++
T Consensus 86 ~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~-------~g~~---~---~~~~ 152 (170)
T 3me7_A 86 KEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYI-------YGVN---Y---NYLE 152 (170)
T ss_dssp HHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEE-------ESSS---C---CHHH
T ss_pred HHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEE-------eCCC---C---CHHH
Confidence 88762 22222 23466788888774 4568999999999999873 2311 1 2466
Q ss_pred HHHHHHHHhccCC
Q 008845 459 IDGQYNEMAKGWP 471 (551)
Q Consensus 459 l~~~l~~~~~~~~ 471 (551)
|.+.|++++...+
T Consensus 153 i~~~l~~~~~~~~ 165 (170)
T 3me7_A 153 FVNALRLARGEGH 165 (170)
T ss_dssp HHHHHHHHTTCSC
T ss_pred HHHHHHHhhcccc
Confidence 7777877766544
No 86
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.75 E-value=3.7e-18 Score=161.43 Aligned_cols=116 Identities=20% Similarity=0.253 Sum_probs=101.2
Q ss_pred CCcccee-cC---CCCeeecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHH
Q 008845 319 GDLDFVV-GK---NGGKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 393 (551)
Q Consensus 319 ~~~~f~~-~~---~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 393 (551)
..|+|.+ +. +|+++++++++||++||+||+ +||++|+.++|.|++++++|+++ +++||+|++|. .+...+|+
T Consensus 45 ~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~--~v~vv~Is~D~-~~~~~~~~ 121 (222)
T 3ztl_A 45 PAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR--NCQVIACSTDS-QYSHLAWD 121 (222)
T ss_dssp ECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHHHHHH
T ss_pred CCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHHH
Confidence 4589987 44 459999999999999999996 99999999999999999999865 69999999985 45667777
Q ss_pred hcC------CCcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEccc
Q 008845 394 KGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 394 ~~~------~~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~ 437 (551)
+.+ ..+.+|+..|....+++.|++. .+|++||||++|+|+++..
T Consensus 122 ~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~ 177 (222)
T 3ztl_A 122 NLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITI 177 (222)
T ss_dssp HSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEE
T ss_pred HHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEe
Confidence 765 2578898888889999999998 8999999999999999854
No 87
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.75 E-value=7.5e-18 Score=156.72 Aligned_cols=117 Identities=21% Similarity=0.373 Sum_probs=97.8
Q ss_pred cccee-cCCCCeeecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhc-CCCeEEEEEeCCC---ChHHHHHHHh
Q 008845 321 LDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKER-NESLEVVFISSDR---DQTSFDEFFK 394 (551)
Q Consensus 321 ~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~-~~~~~vv~vs~d~---~~~~~~~~~~ 394 (551)
|+|.+ +.+|+.+++++++||++||+||++||++ |+.++|.|.++++++.++ ..+++|++|++|. +++.+++|++
T Consensus 22 p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~ 101 (200)
T 2b7k_A 22 GPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLS 101 (200)
T ss_dssp CCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHT
T ss_pred CCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHH
Confidence 89988 9999999999999999999999999997 999999999999999754 3469999999994 6788899998
Q ss_pred cCC--CcccccCchhhHHHHHhcCCC-Ccc---------------eEEEECCCCcEEEccc
Q 008845 395 GMP--WLALPFGDARKASLSRKFKVS-GIP---------------MLVAIGPSGRTITKEA 437 (551)
Q Consensus 395 ~~~--~~~~~~~~d~~~~l~~~~~v~-~~P---------------~~~lid~~G~i~~~~~ 437 (551)
+++ |..++...+....+++.|+|. +.| +++|||++|+|+....
T Consensus 102 ~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~ 162 (200)
T 2b7k_A 102 DFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALG 162 (200)
T ss_dssp TSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEEC
T ss_pred HcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeC
Confidence 875 444555556677899999997 444 8899999999998743
No 88
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.75 E-value=1.8e-18 Score=155.91 Aligned_cols=132 Identities=17% Similarity=0.104 Sum_probs=108.7
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|+.+++++++||+++|+|| ++||++|+.++|.|++++++ .+++|++|+.| +++.+++|++++
T Consensus 25 ~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-----~~~~vv~is~d-~~~~~~~~~~~~ 98 (166)
T 3p7x_A 25 FAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-----EEGIVLTISAD-LPFAQKRWCASA 98 (166)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-----TTSEEEEEESS-CHHHHHHHHHHH
T ss_pred CCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc-----CCCEEEEEECC-CHHHHHHHHHHc
Confidence 3589988 9999999999999999999999 78999999999999998776 25899999997 467889999988
Q ss_pred CCcccccCchh-hHHHHHhcCCCC------cceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHH
Q 008845 397 PWLALPFGDAR-KASLSRKFKVSG------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNE 465 (551)
Q Consensus 397 ~~~~~~~~~d~-~~~l~~~~~v~~------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~ 465 (551)
+...+|+..|. ...+++.|++.. +|++||||++|+|++++..... ....+.+++.+.|++
T Consensus 99 ~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~---------~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 99 GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEG---------TDFPDFDAALAAYKN 165 (166)
T ss_dssp TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBT---------TSCCCHHHHHHHHHT
T ss_pred CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCc---------ccCCCHHHHHHHHhc
Confidence 74378988888 889999999985 8999999999999998533211 223345666666653
No 89
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.75 E-value=8.5e-18 Score=151.99 Aligned_cols=139 Identities=17% Similarity=0.217 Sum_probs=102.5
Q ss_pred ccCCcccee-cCCCCeeecccCCCCEEEEEEecCCCh-hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC---CChHHHHH
Q 008845 317 VSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCP-PCRAFLPKLIDAYKKIKERNESLEVVFISSD---RDQTSFDE 391 (551)
Q Consensus 317 ~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d---~~~~~~~~ 391 (551)
..+.|+|.+ +.+|+++++++++||+|||+||++||+ +|...++.|.++++.+++...++++|+||+| ++++.+++
T Consensus 9 ~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~ 88 (170)
T 4hde_A 9 NWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKA 88 (170)
T ss_dssp CBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHH
T ss_pred CCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHH
Confidence 345689988 999999999999999999999999997 7999999999999999876667999999998 35788899
Q ss_pred HHhcCCC--cccccCch-----hhHHHHHhcC----------CCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHH
Q 008845 392 FFKGMPW--LALPFGDA-----RKASLSRKFK----------VSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEE 454 (551)
Q Consensus 392 ~~~~~~~--~~~~~~~d-----~~~~l~~~~~----------v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 454 (551)
|++.++. ..+.++.+ ........|+ +...|+++|||++|+|+.... | ....
T Consensus 89 y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~-------g-----~~~~ 156 (170)
T 4hde_A 89 FIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYS-------G-----ISNT 156 (170)
T ss_dssp HHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEE-------S-----SSSC
T ss_pred HHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEEC-------C-----CCCC
Confidence 9987642 22222211 1111222333 344689999999999997632 2 1122
Q ss_pred HHHHHHHHHHHHh
Q 008845 455 RMKEIDGQYNEMA 467 (551)
Q Consensus 455 ~~~~l~~~l~~~~ 467 (551)
..++|.+.|+.|+
T Consensus 157 ~~~~l~~~ik~Ll 169 (170)
T 4hde_A 157 PYEDIIRDMKRLA 169 (170)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 3466777777765
No 90
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.75 E-value=2.6e-18 Score=153.68 Aligned_cols=113 Identities=15% Similarity=0.197 Sum_probs=101.0
Q ss_pred CCcccee-cCCCCeeecccCCCC--EEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHh
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGK--TILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 394 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk--~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 394 (551)
..|+|.+ +.+|+++++++++|| ++||+|| ++||++|+.++|.|.+++++++++ + +|++|++| +++..++|++
T Consensus 12 ~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~--~-~vv~is~d-~~~~~~~~~~ 87 (159)
T 2a4v_A 12 PIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY--A-AVFGLSAD-SVTSQKKFQS 87 (159)
T ss_dssp BCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT--C-EEEEEESC-CHHHHHHHHH
T ss_pred CCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC--C-cEEEEeCC-CHHHHHHHHH
Confidence 4589988 999999999999987 8999997 999999999999999999999876 5 99999998 5678889998
Q ss_pred cCCCcccccCchhhHHHHHhcCCCCcc------eEEEECCCCcEEEccc
Q 008845 395 GMPWLALPFGDARKASLSRKFKVSGIP------MLVAIGPSGRTITKEA 437 (551)
Q Consensus 395 ~~~~~~~~~~~d~~~~l~~~~~v~~~P------~~~lid~~G~i~~~~~ 437 (551)
+++ +.+|+..|.+..+++.|++...| +++|| ++|+|+++..
T Consensus 88 ~~~-~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~ 134 (159)
T 2a4v_A 88 KQN-LPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRV 134 (159)
T ss_dssp HHT-CSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEE
T ss_pred HhC-CCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEEc
Confidence 887 57888888888999999999988 88999 9999999853
No 91
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.75 E-value=4.7e-18 Score=170.60 Aligned_cols=114 Identities=16% Similarity=0.265 Sum_probs=104.2
Q ss_pred Cccce-----e-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-----CChHH
Q 008845 320 DLDFV-----V-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-----RDQTS 388 (551)
Q Consensus 320 ~~~f~-----~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d-----~~~~~ 388 (551)
.|+|. + +.+|+.+++++++||+|||+||++||++|+.++|.|++++++++++ ++.||.|++| .+++.
T Consensus 57 aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~--~v~vi~Vs~d~~~~~d~~~~ 134 (352)
T 2hyx_A 57 APDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS--GLAVIGVHTPEYAFEKVPGN 134 (352)
T ss_dssp CCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSGGGGCHHH
T ss_pred CCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC--CeEEEEEECCcccccCCHHH
Confidence 48888 7 8899999999999999999999999999999999999999999875 5999999986 46788
Q ss_pred HHHHHhcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEEEcc
Q 008845 389 FDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 389 ~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 436 (551)
+++|+++++ +.+|+..|....+++.|+|.++|+++|||++|+|+.+.
T Consensus 135 ~~~~~~~~~-l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~ 181 (352)
T 2hyx_A 135 VAKGAANLG-ISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIK 181 (352)
T ss_dssp HHHHHHHHT-CCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEE
T ss_pred HHHHHHHcC-CCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEE
Confidence 999999887 57888888888999999999999999999999999884
No 92
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.75 E-value=5.5e-18 Score=157.30 Aligned_cols=136 Identities=18% Similarity=0.200 Sum_probs=111.4
Q ss_pred CCcccee-cC-CC--CeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHH
Q 008845 319 GDLDFVV-GK-NG--GKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 393 (551)
Q Consensus 319 ~~~~f~~-~~-~g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 393 (551)
..|+|.+ +. +| +.+++++++||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++|. .+...+|+
T Consensus 10 ~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~-~~~~~~~~ 86 (197)
T 1qmv_A 10 PAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL--GCEVLGVSVDS-QFTHLAWI 86 (197)
T ss_dssp BCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHHHHHH
T ss_pred CCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHHH
Confidence 4589988 66 78 999999999999999999 999999999999999999999865 69999999985 46777888
Q ss_pred hcC------CCcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHH
Q 008845 394 KGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDG 461 (551)
Q Consensus 394 ~~~------~~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~ 461 (551)
+.+ ..+.+|+..|....+++.|++. ++|+++|||++|+|+++..+.. . .+...+++.+
T Consensus 87 ~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~-------~---~~~~~~e~l~ 156 (197)
T 1qmv_A 87 NTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDL-------P---VGRSVDEALR 156 (197)
T ss_dssp TSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T---BCCCHHHHHH
T ss_pred HHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCC-------C---CCCCHHHHHH
Confidence 766 2477888888888999999998 8999999999999999854321 0 1224456666
Q ss_pred HHHHHh
Q 008845 462 QYNEMA 467 (551)
Q Consensus 462 ~l~~~~ 467 (551)
.|+++.
T Consensus 157 ~l~~l~ 162 (197)
T 1qmv_A 157 LVQAFQ 162 (197)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 666554
No 93
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.75 E-value=2.8e-17 Score=156.27 Aligned_cols=175 Identities=15% Similarity=0.134 Sum_probs=112.0
Q ss_pred cCCCc-EEEEE----ecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHH
Q 008845 17 SLKGK-IGLYF----SASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKL 91 (551)
Q Consensus 17 ~~~gk-vlv~F----~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (551)
...+. +++.| |+|||+||+.++|.+.++++.+.+.+++.++.|+++.+. .+
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~------------------------~l 73 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHK------------------------EE 73 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCH------------------------HH
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccH------------------------HH
Confidence 44455 44445 499999999999999999988854346889888888664 49
Q ss_pred HhhcCCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCce
Q 008845 92 DELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRK 171 (551)
Q Consensus 92 ~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 171 (551)
++.|+|.++||+++++ +|+... +..|... ...+..++........ . ..-+ +.+.
T Consensus 74 ~~~~~v~~~Ptl~~~~-~~~~~~-------~~~G~~~----~~~l~~~~~~~~~~~~--~-~~~l-----------~~~~ 127 (229)
T 2ywm_A 74 TEKYGVDRVPTIVIEG-DKDYGI-------RYIGLPA----GLEFTTLINGIFHVSQ--R-KPQL-----------SEKT 127 (229)
T ss_dssp HHHTTCCBSSEEEEES-SSCCCE-------EEESCCC----TTHHHHHHHHHHHHHT--T-CCSC-----------CHHH
T ss_pred HHHcCCCcCcEEEEEC-CCcccc-------eecCCcc----HHHHHHHHHHHHhccC--C-ccCC-----------CHHH
Confidence 9999999999999995 443221 1223221 2223333322110000 0 0000 0000
Q ss_pred ee-ccccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHH
Q 008845 172 IS-VSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREK 250 (551)
Q Consensus 172 ~~-~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~ 250 (551)
+. +....++.+++.|+++||++|+.+.|.+.+++..+. + +.++.+|.+. ...
T Consensus 128 ~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~----~--v~~~~vd~~~---------------------~~~ 180 (229)
T 2ywm_A 128 LELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND----Y--ITSKVIDASE---------------------NQD 180 (229)
T ss_dssp HHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT----T--EEEEEEEGGG---------------------CHH
T ss_pred HHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC----C--eEEEEEECCC---------------------CHH
Confidence 00 011244556888999999999999999999888762 3 4444444432 457
Q ss_pred HHhhcCcCCcceEEEECCCCC
Q 008845 251 LARYFELSTLPTLVIIGPDGK 271 (551)
Q Consensus 251 l~~~f~v~~~P~lvi~~~~gk 271 (551)
+++.|+|.++|++++ +|+
T Consensus 181 l~~~~~v~~~Pt~~~---~G~ 198 (229)
T 2ywm_A 181 LAEQFQVVGVPKIVI---NKG 198 (229)
T ss_dssp HHHHTTCCSSSEEEE---GGG
T ss_pred HHHHcCCcccCEEEE---CCE
Confidence 889999999999998 555
No 94
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.74 E-value=3.1e-18 Score=155.22 Aligned_cols=132 Identities=16% Similarity=0.163 Sum_probs=107.5
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCC
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 397 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 397 (551)
.|+|.+ +.+|+.+++++++||++||+|| ++||++|+.++|.|+++++++ . +++||+|++|. ++..++|.++++
T Consensus 27 ~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~---~v~vv~Is~d~-~~~~~~~~~~~~ 101 (171)
T 2yzh_A 27 APEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E---GVDVTVVSMDL-PFAQKRFCESFN 101 (171)
T ss_dssp CCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T---TEEEEEEESSC-HHHHHHHHHHTT
T ss_pred CCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C---CceEEEEeCCC-HHHHHHHHHHcC
Confidence 488988 9999999999999999999999 899999999999999999888 3 59999999984 577889999887
Q ss_pred CcccccCch-hhHHHHHhcCCCC---------cceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHH
Q 008845 398 WLALPFGDA-RKASLSRKFKVSG---------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEM 466 (551)
Q Consensus 398 ~~~~~~~~d-~~~~l~~~~~v~~---------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~ 466 (551)
.-.+|+..| ....+ +.|++.. +|+++|||++|+|+++..+... ....+.+++.+.|+++
T Consensus 102 ~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~---------~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 102 IQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEI---------TEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBT---------TSCCCCHHHHHHHHHC
T ss_pred CCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCc---------CCCCCHHHHHHHHHhh
Confidence 437888888 77788 9999862 6999999999999998542211 1222345666666654
No 95
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.74 E-value=6e-18 Score=154.64 Aligned_cols=117 Identities=15% Similarity=0.186 Sum_probs=92.8
Q ss_pred cCCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHH
Q 008845 318 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSF 389 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~ 389 (551)
...|+|.+ +.+|+.+++++++||+|||+||++||++|+.++|.|.+++++|+++ ++.||+|++|. +.+.+
T Consensus 16 ~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~~~d~~~~~ 93 (180)
T 3kij_A 16 NSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS--HFSVLAFPCNQFGESEPRPSKEV 93 (180)
T ss_dssp CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT--SEEEEEEECCCSTTCCCSCHHHH
T ss_pred CcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC--CeEEEEEECCccccCCCCCHHHH
Confidence 34589988 9999999999999999999999999999999999999999999875 69999999875 67889
Q ss_pred HHHHhc-CCCcccccCc-----hh-hHHHHHhc--CCCCcce----EEEECCCCcEEEccc
Q 008845 390 DEFFKG-MPWLALPFGD-----AR-KASLSRKF--KVSGIPM----LVAIGPSGRTITKEA 437 (551)
Q Consensus 390 ~~~~~~-~~~~~~~~~~-----d~-~~~l~~~~--~v~~~P~----~~lid~~G~i~~~~~ 437 (551)
++|+++ ++ +.+|+.. +. ...+...+ .+.++|+ +||||++|+|+.+..
T Consensus 94 ~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~ 153 (180)
T 3kij_A 94 ESFARKNYG-VTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWR 153 (180)
T ss_dssp HHHHHHHHC-CCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEEC
T ss_pred HHHHHHhcC-CCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEEC
Confidence 999988 65 4555422 11 11111111 1246888 999999999998843
No 96
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.74 E-value=8.4e-18 Score=158.71 Aligned_cols=137 Identities=17% Similarity=0.204 Sum_probs=112.2
Q ss_pred CCcccee----cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHH
Q 008845 319 GDLDFVV----GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 393 (551)
Q Consensus 319 ~~~~f~~----~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 393 (551)
..|+|.+ +.+|+.+++++++||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++|. .+...+|+
T Consensus 32 ~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~--~v~vv~Is~D~-~~~~~~~~ 108 (220)
T 1zye_A 32 HAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV--NCEVVAVSVDS-HFSHLAWI 108 (220)
T ss_dssp BCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT--TEEEEEEESSC-HHHHHHHH
T ss_pred CCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHHH
Confidence 4588876 3578999999999999999999 999999999999999999999875 69999999984 46778888
Q ss_pred hcC----C--CcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHH
Q 008845 394 KGM----P--WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDG 461 (551)
Q Consensus 394 ~~~----~--~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~ 461 (551)
+.+ + .+.+|+..|....+++.|++. ++|+++|||++|+|+++..+.. -.....+++.+
T Consensus 109 ~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~----------~~~~~~~ell~ 178 (220)
T 1zye_A 109 NTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDL----------PVGRSVEETLR 178 (220)
T ss_dssp TSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT----------TCCCCHHHHHH
T ss_pred HHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCC----------CCCCCHHHHHH
Confidence 766 2 467888888888999999999 9999999999999999853321 11234566667
Q ss_pred HHHHHhc
Q 008845 462 QYNEMAK 468 (551)
Q Consensus 462 ~l~~~~~ 468 (551)
.|+++..
T Consensus 179 ~l~~l~~ 185 (220)
T 1zye_A 179 LVKAFQF 185 (220)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 7766653
No 97
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.74 E-value=1.8e-17 Score=145.06 Aligned_cols=106 Identities=19% Similarity=0.300 Sum_probs=93.5
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHH---HHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAE---VYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 83 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~---~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 83 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.+ +++++++. ++.+++|++|.+.+.+++|++++++.+..+.
T Consensus 15 ~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 93 (142)
T 3ewl_A 15 VHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG-TLRVLAIYPDENREEWATKAVYMPQGWIVGW 93 (142)
T ss_dssp TTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT-SEEEEEEECSSCHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC-CeEEEEEEecCCHHHHHHHHHHcCCCcceee
Confidence 57889999999999 9999999999999999999998 99999876 4999999999999999999999998777777
Q ss_pred ChhhHHHHHhhcCCCCCcEEEEEcCCCeEEE
Q 008845 84 DSETRDKLDELFKVMGIPHLVILDENGKVLS 114 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 114 (551)
+........+.|++.++|+++++|++|+++.
T Consensus 94 d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 94 NKAGDIRTRQLYDIRATPTIYLLDGRKRVIL 124 (142)
T ss_dssp CTTCHHHHTTCSCCCSSSEEEEECTTCBEEE
T ss_pred CCccchhhHHHcCCCCCCeEEEECCCCCEEe
Confidence 6664322234899999999999999999987
No 98
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.74 E-value=6.8e-18 Score=154.74 Aligned_cols=115 Identities=14% Similarity=0.182 Sum_probs=94.4
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~~ 390 (551)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ +++|++|++|. +.+.++
T Consensus 26 ~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~ 103 (183)
T 2obi_A 26 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEIK 103 (183)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHH
T ss_pred cccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC--CeEEEEEECCCCCCCCCCCHHHHH
Confidence 4588988 9999999999999999999999999999999999999999999875 69999999973 567899
Q ss_pred HHHhcCCCcccccCc--hhhHH----HHHhc-------C-----CCCcceEEEECCCCcEEEcc
Q 008845 391 EFFKGMPWLALPFGD--ARKAS----LSRKF-------K-----VSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 391 ~~~~~~~~~~~~~~~--d~~~~----l~~~~-------~-----v~~~P~~~lid~~G~i~~~~ 436 (551)
+|+++++ +.+|+.. |.+.. +.+.+ + ++.+|+++|||++|+|+.+.
T Consensus 104 ~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~ 166 (183)
T 2obi_A 104 EFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRY 166 (183)
T ss_dssp HHHHTTT-CCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEE
T ss_pred HHHHHcC-CCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEe
Confidence 9998887 4566653 33222 22211 4 45579999999999999984
No 99
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.74 E-value=5.7e-18 Score=148.52 Aligned_cols=107 Identities=13% Similarity=0.142 Sum_probs=91.5
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCc-cccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLA-VPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~-~~~~~~ 85 (551)
.+|+.+++++++|| ++|+|||+||++|+.++|.|.++++++++. ++.+++|++|.+.+.+++++++++..+ ..+.+.
T Consensus 20 ~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~ 98 (143)
T 4fo5_A 20 GNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEG 98 (143)
T ss_dssp ----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECT
T ss_pred CCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecc
Confidence 46789999999999 999999999999999999999999999876 599999999999999999999988776 334443
Q ss_pred hh-HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 86 ET-RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.. ...+.+.|++.++|+++++|++|+++.+
T Consensus 99 ~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (143)
T 4fo5_A 99 LGKESELYKKYDLRKGFKNFLINDEGVIIAA 129 (143)
T ss_dssp TGGGSHHHHHTTGGGCCCEEEECTTSBEEEE
T ss_pred cccchHHHHHcCCCCCCcEEEECCCCEEEEc
Confidence 22 2468899999999999999999999985
No 100
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.74 E-value=6.5e-18 Score=155.16 Aligned_cols=115 Identities=13% Similarity=0.143 Sum_probs=93.1
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~~ 390 (551)
..|+|.+ +.+|+++++++++||++||+||++||++|+.++|.|++++++++++ +++|++|++|. +.+.++
T Consensus 28 ~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~~ 105 (185)
T 2gs3_A 28 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEIK 105 (185)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHHH
T ss_pred CcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC--CeEEEEEECcccCCCCCCCHHHHH
Confidence 4588988 9999999999999999999999999999999999999999999876 69999999873 457788
Q ss_pred HHHhcCCCcccccCc--hhhHH----HHHhc-------C-----CCCcceEEEECCCCcEEEcc
Q 008845 391 EFFKGMPWLALPFGD--ARKAS----LSRKF-------K-----VSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 391 ~~~~~~~~~~~~~~~--d~~~~----l~~~~-------~-----v~~~P~~~lid~~G~i~~~~ 436 (551)
+|+++++ +.+|+.. |.++. +.+.+ + ++.+|+++|||++|+|+.+.
T Consensus 106 ~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~ 168 (185)
T 2gs3_A 106 EFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRY 168 (185)
T ss_dssp HHHHHTT-CCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEE
T ss_pred HHHHHcC-CCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEee
Confidence 9998876 4566553 22221 22211 4 34479999999999999984
No 101
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.74 E-value=6e-18 Score=151.83 Aligned_cols=115 Identities=17% Similarity=0.303 Sum_probs=101.6
Q ss_pred CCcccee---cCCC--Ceeeccc-CCCCEEEEEEe-cCCChhHH-hhhHHHHHHHHHHhhcCCCeE-EEEEeCCCChHHH
Q 008845 319 GDLDFVV---GKNG--GKVPVSD-LAGKTILLYFS-AHWCPPCR-AFLPKLIDAYKKIKERNESLE-VVFISSDRDQTSF 389 (551)
Q Consensus 319 ~~~~f~~---~~~g--~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~-vv~vs~d~~~~~~ 389 (551)
..|+|.+ +.+| +++++++ ++||++||+|| ++||++|+ .++|.|++++++++++ +++ |++||+| +++..
T Consensus 9 ~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~--~v~~vv~Is~d-~~~~~ 85 (162)
T 1tp9_A 9 VLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK--GVTEILCISVN-DPFVM 85 (162)
T ss_dssp BCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT--TCCCEEEEESS-CHHHH
T ss_pred CCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEECC-CHHHH
Confidence 3588875 7899 9999999 89999999999 89999999 9999999999999865 689 9999998 56788
Q ss_pred HHHHhcCCCc-ccccCchhhHHHHHhcCCC------C-----cceEEEECCCCcEEEccc
Q 008845 390 DEFFKGMPWL-ALPFGDARKASLSRKFKVS------G-----IPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 390 ~~~~~~~~~~-~~~~~~d~~~~l~~~~~v~------~-----~P~~~lid~~G~i~~~~~ 437 (551)
++|.++++.- .+|+..|.+..+++.||+. + +|+++||| +|+|++...
T Consensus 86 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~ 144 (162)
T 1tp9_A 86 KAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANI 144 (162)
T ss_dssp HHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEE
T ss_pred HHHHHhcCCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEe
Confidence 9999988843 6899999999999999997 3 89999999 999999853
No 102
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.74 E-value=2.6e-18 Score=154.73 Aligned_cols=114 Identities=15% Similarity=0.129 Sum_probs=99.8
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|+.+++++++||++||+|| ++||++|+.++|.|+++++++ . +++|++|++| +++.+++|++++
T Consensus 22 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~---~v~vv~Is~d-~~~~~~~~~~~~ 96 (165)
T 1q98_A 22 IVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S---NTIVLCISAD-LPFAQARFCGAE 96 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T---TEEEEEEESS-CHHHHTTCTTTT
T ss_pred CCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CCEEEEEeCC-CHHHHHHHHHHc
Confidence 3588988 9999999999999999999999 899999999999999999998 3 5999999997 456778888887
Q ss_pred CCcccccCchh-hHHHHHhcCCCC---------cceEEEECCCCcEEEccc
Q 008845 397 PWLALPFGDAR-KASLSRKFKVSG---------IPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 397 ~~~~~~~~~d~-~~~l~~~~~v~~---------~P~~~lid~~G~i~~~~~ 437 (551)
+.-++|+..|. ...+++.|++.. .|+++|||++|+|++...
T Consensus 97 ~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 97 GIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp TCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred CCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEe
Confidence 74368888886 788999999863 599999999999999854
No 103
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.73 E-value=9.3e-18 Score=160.25 Aligned_cols=117 Identities=16% Similarity=0.180 Sum_probs=101.8
Q ss_pred cCCcccee----cCCCCeeecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHH
Q 008845 318 SGDLDFVV----GKNGGKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 392 (551)
Q Consensus 318 ~~~~~f~~----~~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 392 (551)
...|+|.+ +.+|++++|++++||++||+||+ +||++|+.++|.|.+++++|+++ +++||+|++|. .....+|
T Consensus 52 ~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~--gv~vv~Is~D~-~~~~~~~ 128 (240)
T 3qpm_A 52 KPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI--NTEVVACSVDS-QFTHLAW 128 (240)
T ss_dssp SBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT--TEEEEEEESSC-HHHHHHH
T ss_pred CCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHH
Confidence 34589985 34467999999999999999999 99999999999999999999875 69999999985 4677788
Q ss_pred HhcC------CCcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEccc
Q 008845 393 FKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 393 ~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~ 437 (551)
++.+ ..+.+|+..|.+..+++.|++. .+|++||||++|+|+++..
T Consensus 129 ~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~ 185 (240)
T 3qpm_A 129 IITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITM 185 (240)
T ss_dssp HHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred HHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEe
Confidence 8765 2478899999999999999998 6899999999999999853
No 104
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.73 E-value=4.4e-17 Score=144.21 Aligned_cols=106 Identities=16% Similarity=0.297 Sum_probs=92.4
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCCh-
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS- 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~- 85 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|.+++++++.. ++.++.|++| +.+.+.+|+++++..+..+.+.
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d-~~~~~~~~~~~~~~~~~~~~~~~ 89 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG-SVDMVGIALD-TSDNIGNFLKQTPVSYPIWRYTG 89 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-TEEEEEEESS-CHHHHHHHHHHSCCSSCEEEECC
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECC-ChHHHHHHHHHcCCCCceEecCc
Confidence 68999999999999 999999999999999999999999999765 5999999997 5678999999998766554432
Q ss_pred hhHHHHHhhcC--CCCCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFK--VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~--v~~~P~~~lid~~G~i~~~ 115 (551)
.....+.+.|+ +.++|+++++|++|+++..
T Consensus 90 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (151)
T 3raz_A 90 ANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQT 121 (151)
T ss_dssp SCHHHHHHTTTCCSCCSSEEEEEETTTTEEEE
T ss_pred cchHHHHHHhCCccCCCCEEEEECCCCcEEEE
Confidence 22357889999 9999999999999999874
No 105
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.73 E-value=4e-17 Score=152.08 Aligned_cols=114 Identities=13% Similarity=0.146 Sum_probs=90.0
Q ss_pred CCcccee-cCC-CCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChHHH
Q 008845 319 GDLDFVV-GKN-GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSF 389 (551)
Q Consensus 319 ~~~~f~~-~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~-------~~~~~ 389 (551)
..|+|.+ +.+ |+.++|++++||+|||+|||+|||+| .++|.|++++++|+++ +++||+|++|. +.+++
T Consensus 16 ~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~--g~~vlgvs~d~f~~~e~~~~~~i 92 (207)
T 2r37_A 16 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPF--GLVILGFPCNQFGKQEPGENSEI 92 (207)
T ss_dssp CGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG--TEEEEEEECCCBTTCCCSCHHHH
T ss_pred ccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC--CEEEEEEECcccCcCCCCCHHHH
Confidence 4589988 899 99999999999999999999999999 7999999999999876 69999999762 35678
Q ss_pred HHHHh------cCCCcccccCchh--h----HH----HHHh-------cC--------------CCCcceEEEECCCCcE
Q 008845 390 DEFFK------GMPWLALPFGDAR--K----AS----LSRK-------FK--------------VSGIPMLVAIGPSGRT 432 (551)
Q Consensus 390 ~~~~~------~~~~~~~~~~~d~--~----~~----l~~~-------~~--------------v~~~P~~~lid~~G~i 432 (551)
++|++ +++ +.+|+..+. + .. +... ++ |...|++||||++|+|
T Consensus 93 ~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i 171 (207)
T 2r37_A 93 LPTLKYVRPGGGFV-PNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIP 171 (207)
T ss_dssp HHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCE
T ss_pred HHHHHhcchhhccC-ccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcE
Confidence 88998 666 567765431 1 11 2111 11 2334899999999999
Q ss_pred EEcc
Q 008845 433 ITKE 436 (551)
Q Consensus 433 ~~~~ 436 (551)
+.+.
T Consensus 172 ~~~~ 175 (207)
T 2r37_A 172 IMRW 175 (207)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9884
No 106
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.73 E-value=1.5e-17 Score=147.87 Aligned_cols=112 Identities=21% Similarity=0.318 Sum_probs=99.2
Q ss_pred CCcccee-cCCC--------CeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHH
Q 008845 319 GDLDFVV-GKNG--------GKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSF 389 (551)
Q Consensus 319 ~~~~f~~-~~~g--------~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~ 389 (551)
..|+|.+ +.+| +.+++++++||+++|+||++||++|+.++|.|++++++ .++.++.|++|.+.+.+
T Consensus 13 ~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-----~~v~~v~v~~~~~~~~~ 87 (156)
T 1kng_A 13 PAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD-----KRFQLVGINYKDAADNA 87 (156)
T ss_dssp BCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC-----TTSEEEEEEESCCHHHH
T ss_pred CCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc-----CCeEEEEEECCCCHHHH
Confidence 4588988 8888 99999999999999999999999999999999888765 24899999999998999
Q ss_pred HHHHhcCCCcccc-cCchhhHHHHHhcCCCCcceEEEECCCCcEEEcc
Q 008845 390 DEFFKGMPWLALP-FGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 390 ~~~~~~~~~~~~~-~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 436 (551)
.+|+++++ +.+| +..+....+++.|++.++|++++||++|+++.+.
T Consensus 88 ~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~~ 134 (156)
T 1kng_A 88 RRFLGRYG-NPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKL 134 (156)
T ss_dssp HHHHHHHC-CCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSBEEEEE
T ss_pred HHHHHHcC-CCCceeeeCchhHHHHhcCcCccCeEEEEcCCCCEEEEE
Confidence 99999887 4566 6667778899999999999999999999999873
No 107
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.73 E-value=1.9e-17 Score=149.08 Aligned_cols=115 Identities=15% Similarity=0.188 Sum_probs=100.8
Q ss_pred CCcccee--cCCCCeeecccC-CCCEEEEEEe-cCCChhHHh-hhHHHHHHHHHHhhcCCCe-EEEEEeCCCChHHHHHH
Q 008845 319 GDLDFVV--GKNGGKVPVSDL-AGKTILLYFS-AHWCPPCRA-FLPKLIDAYKKIKERNESL-EVVFISSDRDQTSFDEF 392 (551)
Q Consensus 319 ~~~~f~~--~~~g~~v~l~~~-~gk~vll~F~-a~wC~~C~~-~~p~l~~l~~~~~~~~~~~-~vv~vs~d~~~~~~~~~ 392 (551)
..|+|.+ +.+|++++++++ +||++||+|| ++|||+|+. ++|.|++++++++++ ++ +||+||+| +++..++|
T Consensus 8 ~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~--gv~~vv~Is~d-~~~~~~~~ 84 (167)
T 2wfc_A 8 KLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK--GVDIIACMAVN-DSFVMDAW 84 (167)
T ss_dssp BCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT--TCCEEEEEESS-CHHHHHHH
T ss_pred cCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCC-CHHHHHHH
Confidence 4588876 788999999998 9999999987 999999999 999999999999876 69 99999997 56788899
Q ss_pred HhcCCCc-ccccCchhhHHHHHhcCCCCc-----------ceEEEECCCCcEEEccc
Q 008845 393 FKGMPWL-ALPFGDARKASLSRKFKVSGI-----------PMLVAIGPSGRTITKEA 437 (551)
Q Consensus 393 ~~~~~~~-~~~~~~d~~~~l~~~~~v~~~-----------P~~~lid~~G~i~~~~~ 437 (551)
.++++.. ++|++.|.+..+++.||+... |++||| ++|+|++...
T Consensus 85 ~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~ 140 (167)
T 2wfc_A 85 GKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNV 140 (167)
T ss_dssp HHHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEE
T ss_pred HHhcCCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEe
Confidence 9988742 389999999999999999754 999999 9999999854
No 108
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.73 E-value=8.2e-18 Score=152.26 Aligned_cols=115 Identities=25% Similarity=0.440 Sum_probs=97.4
Q ss_pred Ccccee-cCCCCeeecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhcC-CCeEEEEEeCCC---ChHHHHHHH
Q 008845 320 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKERN-ESLEVVFISSDR---DQTSFDEFF 393 (551)
Q Consensus 320 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~-~~~~vv~vs~d~---~~~~~~~~~ 393 (551)
.|+|.+ +.+| .+++++++||++||+||++||++ |+.++|.|.+++++++++. .+++|++|++|. +++.+++|+
T Consensus 16 ~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~ 94 (172)
T 2k6v_A 16 PVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYA 94 (172)
T ss_dssp ECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHH
T ss_pred CCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHH
Confidence 588988 9999 99999999999999999999997 9999999999999887531 259999999984 467888999
Q ss_pred hcCCCcccccCchhh---HHHHHhcCC---------------CCcceEEEECCCCcEEEccc
Q 008845 394 KGMPWLALPFGDARK---ASLSRKFKV---------------SGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 394 ~~~~~~~~~~~~d~~---~~l~~~~~v---------------~~~P~~~lid~~G~i~~~~~ 437 (551)
++++ +.+++..|.. ..+++.|++ .++|+++||| +|+++.+..
T Consensus 95 ~~~~-~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~ 154 (172)
T 2k6v_A 95 KAFH-PSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYS 154 (172)
T ss_dssp HHHC-TTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEEC
T ss_pred HHhC-CCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEEC
Confidence 9887 5677776655 577777775 5789999999 999998843
No 109
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.73 E-value=6.2e-18 Score=157.09 Aligned_cols=115 Identities=21% Similarity=0.179 Sum_probs=101.3
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|+.+++++++||++||+|| ++||++|+.++|.|+++++++ . +++|++|+.| +++.+++|++++
T Consensus 57 ~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~---~v~vv~Is~D-~~~~~~~~~~~~ 131 (200)
T 3zrd_A 57 KAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E---NTVVLCISSD-LPFAQSRFCGAE 131 (200)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T---TEEEEEEESS-CHHHHTTCTTTT
T ss_pred CCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C---CCEEEEEECC-CHHHHHHHHHHc
Confidence 3589988 9999999999999999999999 789999999999999999998 2 5999999998 457788888888
Q ss_pred CCcccccCchh-hHHHHHhcCCC---------CcceEEEECCCCcEEEcccc
Q 008845 397 PWLALPFGDAR-KASLSRKFKVS---------GIPMLVAIGPSGRTITKEAR 438 (551)
Q Consensus 397 ~~~~~~~~~d~-~~~l~~~~~v~---------~~P~~~lid~~G~i~~~~~~ 438 (551)
+.-.+|+..|. ...+++.|++. .+|++||||++|+|+++...
T Consensus 132 ~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~ 183 (200)
T 3zrd_A 132 GLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELV 183 (200)
T ss_dssp TCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred CCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEec
Confidence 73388988888 88999999996 36999999999999998543
No 110
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.72 E-value=1.7e-17 Score=147.98 Aligned_cols=108 Identities=16% Similarity=0.265 Sum_probs=93.6
Q ss_pred cccCceeecccCCCc-EEEEEecCCCHhhHhh-hHHHHHHHHHhcCCCCEEEEEEeCC------CCHHHHHHHHhhCCCC
Q 008845 7 YELLLRVKLDSLKGK-IGLYFSASWCGPCQRF-TPILAEVYNELSRQGDFEVIFVSGD------EDDEAFKGYFSKMPWL 78 (551)
Q Consensus 7 ~~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~-~p~l~~~~~~~~~~~~~~vv~v~~d------~~~~~~~~~~~~~~~~ 78 (551)
++.|+.+++++++|| +||+||++||++|+.+ +|.|.++++++++. ++.++.|+++ .+.+.+++|+++++..
T Consensus 15 ~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (158)
T 3eyt_A 15 FNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED-KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIK 93 (158)
T ss_dssp ESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC
T ss_pred hcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC-CEEEEEEEecccccccCCHHHHHHHHHHcCCC
Confidence 367899999999999 9999999999999996 99999999999876 4999999984 5789999999999877
Q ss_pred ccccCChhhHH---HHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 79 AVPFSDSETRD---KLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~~~~~~~---~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+..+.+..... .+.+.|++.++|+++|+|++|+++.+
T Consensus 94 ~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 94 FPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp SCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred ceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 66555444311 58899999999999999999999874
No 111
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.72 E-value=1.6e-17 Score=149.94 Aligned_cols=113 Identities=23% Similarity=0.255 Sum_probs=97.5
Q ss_pred cCCcccee-cC--CCCeeecccC-CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHH
Q 008845 318 SGDLDFVV-GK--NGGKVPVSDL-AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 393 (551)
Q Consensus 318 ~~~~~f~~-~~--~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 393 (551)
...|+|.+ +. +|+.+.++++ +||++||+||++||++|+.++|.|++++++ ++.++.|++|.+.+.+.+|+
T Consensus 26 ~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~v~~~~~~~~~~~~~ 99 (168)
T 2b1k_A 26 KPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ------GIRVVGMNYKDDRQKAISWL 99 (168)
T ss_dssp SBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCCEEEEEESCCHHHHHHHH
T ss_pred CcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC------CCEEEEEECCCChHHHHHHH
Confidence 34589988 77 8999999885 899999999999999999999999888765 38999999998889999999
Q ss_pred hcCCCcccc-cCchhhHHHHHhcCCCCcceEEEECCCCcEEEccc
Q 008845 394 KGMPWLALP-FGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 394 ~~~~~~~~~-~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~ 437 (551)
++++ +.++ +..|....+++.|+|.++|++++||++|+++.+..
T Consensus 100 ~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 143 (168)
T 2b1k_A 100 KELG-NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA 143 (168)
T ss_dssp HHHC-CCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEE
T ss_pred HHcC-CCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEe
Confidence 8877 3444 44567778999999999999999999999998743
No 112
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.71 E-value=7.4e-18 Score=153.29 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=95.5
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCC-ChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHW-CPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|+.+++++++||++||+||++| |++|+.++|.|.+++++ . +++||+|++|. ++..++|++++
T Consensus 23 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~---~v~vv~Is~D~-~~~~~~~~~~~ 96 (175)
T 1xvq_A 23 PAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S---GATVLCVSKDL-PFAQKRFCGAE 96 (175)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T---TCEEEEEESSC-HHHHTTCC---
T ss_pred cCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c---CCEEEEEECCC-HHHHHHHHHHc
Confidence 3588988 9999999999999999999999999 99999999999999887 2 59999999974 46677888877
Q ss_pred CCcccccCchhhHHHHHhcCCCCc---------ceEEEECCCCcEEEccc
Q 008845 397 PWLALPFGDARKASLSRKFKVSGI---------PMLVAIGPSGRTITKEA 437 (551)
Q Consensus 397 ~~~~~~~~~d~~~~l~~~~~v~~~---------P~~~lid~~G~i~~~~~ 437 (551)
++..+|+..|....+++.|++... |+++|||++|+|+++..
T Consensus 97 ~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 97 GTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp ---CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEE
T ss_pred CCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEE
Confidence 744788888888889999999887 99999999999999853
No 113
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.71 E-value=1.4e-17 Score=152.14 Aligned_cols=134 Identities=12% Similarity=0.200 Sum_probs=106.4
Q ss_pred cCCcccee-cC--CC-Ceeeccc-CCCCEEE-EEEecCCChhHHh-hhHHHHHHHHHHhhcCCCeE-EEEEeCCCChHHH
Q 008845 318 SGDLDFVV-GK--NG-GKVPVSD-LAGKTIL-LYFSAHWCPPCRA-FLPKLIDAYKKIKERNESLE-VVFISSDRDQTSF 389 (551)
Q Consensus 318 ~~~~~f~~-~~--~g-~~v~l~~-~~gk~vl-l~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~-vv~vs~d~~~~~~ 389 (551)
...|+|.+ +. +| +++++++ ++||+++ ++||++|||+|+. ++|.|++++++|+++ +++ |+.||+| ++...
T Consensus 30 ~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~--gv~~vv~Is~d-~~~~~ 106 (184)
T 3uma_A 30 DKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR--GVDDIAVVAVN-DLHVM 106 (184)
T ss_dssp CBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT--TCCEEEEEESS-CHHHH
T ss_pred CCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc--CCCEEEEEECC-CHHHH
Confidence 34589988 76 88 9999999 8999654 5566999999999 799999999999876 688 9999997 56788
Q ss_pred HHHHhcCCCc-ccccCchhhHHHHHhcCCC-----------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHH
Q 008845 390 DEFFKGMPWL-ALPFGDARKASLSRKFKVS-----------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMK 457 (551)
Q Consensus 390 ~~~~~~~~~~-~~~~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~ 457 (551)
++|.++++.. .+|++.|.++.+++.||+. ..|++|||| +|+|++..... ..-++.....+
T Consensus 107 ~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~-------~~g~~~~~~~~ 178 (184)
T 3uma_A 107 GAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEE-------SPGQATASGAA 178 (184)
T ss_dssp HHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECS-------STTCCSTTSHH
T ss_pred HHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeC-------CCCCCcCCCHH
Confidence 8999988743 4999999999999999996 358899996 99999985432 22234455555
Q ss_pred HHHHH
Q 008845 458 EIDGQ 462 (551)
Q Consensus 458 ~l~~~ 462 (551)
++.++
T Consensus 179 ~vL~~ 183 (184)
T 3uma_A 179 AMLEL 183 (184)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 55543
No 114
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.71 E-value=7e-17 Score=143.10 Aligned_cols=107 Identities=24% Similarity=0.382 Sum_probs=95.3
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++. ++.++.|++|.+.+.+++++++++..+..+.+..
T Consensus 17 ~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~ 95 (152)
T 2lrn_A 17 LKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQK 95 (152)
T ss_dssp SSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT-TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECH
T ss_pred CCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHHHhCCCCeEEeccc
Confidence 46889999999999 999999999999999999999999999876 4999999999999999999999887766665542
Q ss_pred h-HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 87 T-RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 87 ~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
. ...+.+.|++.++|+++++|++|+++..
T Consensus 96 ~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (152)
T 2lrn_A 96 DDVKDVLESYCIVGFPHIILVDPEGKIVAK 125 (152)
T ss_dssp HHHHHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred chhHHHHHHhCCCcCCeEEEECCCCeEEEe
Confidence 2 3578999999999999999999999985
No 115
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.71 E-value=4.6e-15 Score=152.09 Aligned_cols=269 Identities=12% Similarity=0.194 Sum_probs=149.4
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcC----CCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSR----QGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~----~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
.++ ++|+||||||+||+.+.|.|.++++.++. .+++.++.|+++... .+++
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~------------------------~l~~ 76 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS------------------------DIAQ 76 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH------------------------HHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH------------------------HHHH
Confidence 467 99999999999999999999999999964 235888888888664 4999
Q ss_pred hcCCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCceee
Q 008845 94 LFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKIS 173 (551)
Q Consensus 94 ~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 173 (551)
.|+|.++||++++ ++|+++.+ ...| ..+.+.+.+++...- ......+... .+.-.
T Consensus 77 ~~~v~~~Pt~~~f-~~G~~~~~------~~~G----~~~~~~l~~~i~~~~----~~~v~~l~~~----------~~l~~ 131 (382)
T 2r2j_A 77 RYRISKYPTLKLF-RNGMMMKR------EYRG----QRSVKALADYIRQQK----SDPIQEIRDL----------AEITT 131 (382)
T ss_dssp HTTCCEESEEEEE-ETTEEEEE------ECCS----CCSHHHHHHHHHHHH----SCCCEEC------------------
T ss_pred hcCCCcCCEEEEE-eCCcEeee------eecC----cchHHHHHHHHHHhc----cCCceecCCH----------HHHHH
Confidence 9999999999998 68887642 0112 134555555554321 1111111000 00000
Q ss_pred ccccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEE-eecccCHHHHHHHhcCCCCccccCCchhHHHHH
Q 008845 174 VSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVL-ISLDDEEESFKRDLGSMPWLALPFKDKSREKLA 252 (551)
Q Consensus 174 ~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~-v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~ 252 (551)
+ . ..+.+++.|+.+++. ...+.+.+++..+++. +.| +..+ + +.
T Consensus 132 l-~-~~~~~~v~ff~~~~~---~~~~~f~~~A~~~~~~-----~~F~~~~~-~-------------------------~~ 175 (382)
T 2r2j_A 132 L-D-RSKRNIIGYFEQKDS---DNYRVFERVANILHDD-----CAFLSAFG-D-------------------------VS 175 (382)
T ss_dssp ------CCEEEEEESCSSS---HHHHHHHHHHHHHTTT-----CEEEEEES-C-------------------------C-
T ss_pred h-c-CCCCEEEEEECCCCC---hhHHHHHHHHHHhhcc-----ceEEEEeh-h-------------------------hH
Confidence 1 1 223344444455432 3355677888888764 222 2222 1 12
Q ss_pred hhcCcCCcceEEEECCCC---CcccccchhhhhhcCCCCCCC-ChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCC
Q 008845 253 RYFELSTLPTLVIIGPDG---KTLHSNVAEAIEEHGVGAFPF-TPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKN 328 (551)
Q Consensus 253 ~~f~v~~~P~lvi~~~~g---k~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~ 328 (551)
+.+++++.| +++...+. ...+. | .+ +.+.+..++..... +.+ +.+.- .+
T Consensus 176 ~~~~v~~~p-i~~~~~~~~~~~~~y~---------g----~~~~~~~l~~fi~~~~~----p~v--------~elt~-~~ 228 (382)
T 2r2j_A 176 KPERYSGDN-IIYKPPGHSAPDMVYL---------G----AMTNFDVTYNWIQDKCV----PLV--------REITF-EN 228 (382)
T ss_dssp -------CE-EEEECSSSSSCCEECC---------S----CTTCHHHHHHHHHHHHS----CSS--------EECCH-HH
T ss_pred HhhCCCCCc-eEECCCCCCCcCcccC---------C----CCCCHHHHHHHHHhccc----Cce--------EecCh-hh
Confidence 446778889 65554311 11111 1 23 56777777764321 000 00000 00
Q ss_pred CCeeecccCCCCEEEEEEecCCCh-hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchh
Q 008845 329 GGKVPVSDLAGKTILLYFSAHWCP-PCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDAR 407 (551)
Q Consensus 329 g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~ 407 (551)
...+ +. .+++++|.|+.++|. .+..+...+.+++.++++ .+.++.++.+...
T Consensus 229 ~~~~-~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~---~i~f~~id~~~~~--------------------- 281 (382)
T 2r2j_A 229 GEEL-TE--EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG---TINFLHADCDKFR--------------------- 281 (382)
T ss_dssp HHHH-HT--TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT---TSEEEEEETTTTH---------------------
T ss_pred HHHH-hc--CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC---eeEEEEEchHHhH---------------------
Confidence 0011 11 267888999999874 355555555555545543 4888888776443
Q ss_pred hHHHHHhcCCC--CcceEEEECC
Q 008845 408 KASLSRKFKVS--GIPMLVAIGP 428 (551)
Q Consensus 408 ~~~l~~~~~v~--~~P~~~lid~ 428 (551)
.+.+.||+. .+|.+++++.
T Consensus 282 --~~~~~~gl~~~~~P~i~i~~~ 302 (382)
T 2r2j_A 282 --HPLLHIQKTPADCPVIAIDSF 302 (382)
T ss_dssp --HHHHHTTCCGGGCSEEEEECS
T ss_pred --HHHHHcCCCccCCCEEEEEcc
Confidence 467788887 6899988864
No 116
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.71 E-value=5.1e-17 Score=142.90 Aligned_cols=107 Identities=21% Similarity=0.350 Sum_probs=95.5
Q ss_pred ccCceeecc--cCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHh-cCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccC
Q 008845 8 ELLLRVKLD--SLKGK-IGLYFSASWCGPCQRFTPILAEVYNEL-SRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 83 (551)
Q Consensus 8 ~~~~~v~l~--~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~-~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 83 (551)
.+|+.++++ +++|| ++|+||++||++|+.++|.|.++++++ ++. ++.++.|++|.+.+.+++++++++..+..+.
T Consensus 19 ~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 97 (148)
T 3fkf_A 19 EKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK-NFAMLGISLDIDREAWETAIKKDTLSWDQVC 97 (148)
T ss_dssp TTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT-TEEEEEEECCSCHHHHHHHHHHTTCCSEEEC
T ss_pred CCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC-CeEEEEEECCCCHHHHHHHHHHcCCCceEEE
Confidence 478899999 99999 999999999999999999999999999 655 4999999999999999999999998777666
Q ss_pred Chhh-HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 84 DSET-RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+... ...+.+.|++.++|+++++|++|+++..
T Consensus 98 d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 130 (148)
T 3fkf_A 98 DFTGLSSETAKQYAILTLPTNILLSPTGKILAR 130 (148)
T ss_dssp CSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred ccCCcchHHHHhcCCCCcCEEEEECCCCeEEEe
Confidence 6532 3478999999999999999999999985
No 117
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.70 E-value=4.7e-17 Score=147.02 Aligned_cols=117 Identities=16% Similarity=0.264 Sum_probs=99.5
Q ss_pred cCCcccee--cCCCCeeeccc-CCCCEEEEEE-ecCCChhHH-hhhHHHHHHHHHHhhcCCCeEEEE-EeCCCChHHHHH
Q 008845 318 SGDLDFVV--GKNGGKVPVSD-LAGKTILLYF-SAHWCPPCR-AFLPKLIDAYKKIKERNESLEVVF-ISSDRDQTSFDE 391 (551)
Q Consensus 318 ~~~~~f~~--~~~g~~v~l~~-~~gk~vll~F-~a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~vv~-vs~d~~~~~~~~ 391 (551)
...|+|.+ +.+|++++|++ ++||+++|+| |++|||+|+ .++|.|++++++|+++ +++||+ ||.| ++...++
T Consensus 19 ~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~--gv~vv~~iS~D-~~~~~~~ 95 (173)
T 3mng_A 19 DAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK--GVQVVACLSVN-DAFVTGE 95 (173)
T ss_dssp CBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT--TCCEEEEEESS-CHHHHHH
T ss_pred CCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEEcCC-CHHHHHH
Confidence 34589977 68999999999 6999766655 599999999 5999999999999876 689997 9997 4578889
Q ss_pred HHhcCCCc-ccccCchhhHHHHHhcCCC-------------CcceEEEECCCCcEEEcccc
Q 008845 392 FFKGMPWL-ALPFGDARKASLSRKFKVS-------------GIPMLVAIGPSGRTITKEAR 438 (551)
Q Consensus 392 ~~~~~~~~-~~~~~~d~~~~l~~~~~v~-------------~~P~~~lid~~G~i~~~~~~ 438 (551)
|.++++.. .+|++.|.++.+++.||+. ..|++|||| +|+|++....
T Consensus 96 f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~ 155 (173)
T 3mng_A 96 WGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVE 155 (173)
T ss_dssp HHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEEC
T ss_pred HHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEe
Confidence 99988843 4999999999999999986 359999999 9999998543
No 118
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=9.6e-17 Score=141.86 Aligned_cols=107 Identities=19% Similarity=0.294 Sum_probs=95.8
Q ss_pred ccCceeecc--cCCCc-EEEEEecCCCHh--hHhhhHHHHHHHHHh-cCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccc
Q 008845 8 ELLLRVKLD--SLKGK-IGLYFSASWCGP--CQRFTPILAEVYNEL-SRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVP 81 (551)
Q Consensus 8 ~~~~~v~l~--~~~gk-vlv~F~a~wC~~--C~~~~p~l~~~~~~~-~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 81 (551)
.+|+.++++ +++|| ++|+||++||++ |+.++|.|.++++++ ++. ++.+++|++|.+.+.+++|+++++..+..
T Consensus 19 ~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~ 97 (150)
T 3fw2_A 19 AKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK-YIGMLGISLDVDKQQWKDAIKRDTLDWEQ 97 (150)
T ss_dssp TTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS-SEEEEEEECCSCHHHHHHHHHHTTCCSEE
T ss_pred CCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC-CeEEEEEEcCCCHHHHHHHHHHhCCCceE
Confidence 578899999 99999 999999999999 999999999999999 655 49999999999999999999999887776
Q ss_pred cCChhh-HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 82 FSDSET-RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 82 ~~~~~~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+.+... ...+.+.|++.++|+++++|++|+++..
T Consensus 98 ~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (150)
T 3fw2_A 98 VCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAK 132 (150)
T ss_dssp ECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred EEcCcccchHHHHHcCCCccCeEEEECCCCEEEEc
Confidence 666522 2468999999999999999999999986
No 119
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.70 E-value=4e-17 Score=145.81 Aligned_cols=108 Identities=15% Similarity=0.237 Sum_probs=92.5
Q ss_pred cccCceeecccCCCc-EEEEEecCCCHhhHhh-hHHHHHHHHHhcCCCCEEEEEEeCC------CCHHHHHHHHhhCCCC
Q 008845 7 YELLLRVKLDSLKGK-IGLYFSASWCGPCQRF-TPILAEVYNELSRQGDFEVIFVSGD------EDDEAFKGYFSKMPWL 78 (551)
Q Consensus 7 ~~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~-~p~l~~~~~~~~~~~~~~vv~v~~d------~~~~~~~~~~~~~~~~ 78 (551)
+.+|+.+++++++|| +||+||++||++|+.+ +|.|.++++++++. ++.++.|+++ .+.+.+++|+++++..
T Consensus 17 ~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (160)
T 3lor_A 17 WVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIK 95 (160)
T ss_dssp ESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC
T ss_pred ccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCC
Confidence 357899999999999 9999999999999995 99999999999876 4999999984 6889999999999877
Q ss_pred ccccCChhhH----HHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 79 AVPFSDSETR----DKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~~~~~~----~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+..+.+.... ..+.+.|++.++|+++++|++|+++..
T Consensus 96 ~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 96 FPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp SCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred CcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 6554443321 128899999999999999999999974
No 120
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.70 E-value=3e-17 Score=157.72 Aligned_cols=117 Identities=15% Similarity=0.164 Sum_probs=101.6
Q ss_pred cCCcccee----cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHH
Q 008845 318 SGDLDFVV----GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 392 (551)
Q Consensus 318 ~~~~~f~~----~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 392 (551)
...|+|.+ +.+|++++|++++||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++|. .....+|
T Consensus 66 ~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~--gv~vv~IS~D~-~~~~~~~ 142 (254)
T 3tjj_A 66 KPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVDS-QFTHLAW 142 (254)
T ss_dssp SBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHHHHH
T ss_pred CCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEcCCC-HHHHHHH
Confidence 34589984 4467899999999999999999 999999999999999999999875 69999999984 4677788
Q ss_pred HhcC------CCcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEccc
Q 008845 393 FKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 393 ~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~ 437 (551)
++.+ ..+.+|+..|....+++.|++. .+|++||||++|+|+++..
T Consensus 143 ~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~ 199 (254)
T 3tjj_A 143 INTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITL 199 (254)
T ss_dssp HTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred HHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEe
Confidence 8765 2478899999889999999996 5899999999999999853
No 121
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.70 E-value=3.9e-17 Score=154.69 Aligned_cols=136 Identities=18% Similarity=0.224 Sum_probs=110.1
Q ss_pred cCCcccee-cCCCCeeecccCCCC-EEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHh
Q 008845 318 SGDLDFVV-GKNGGKVPVSDLAGK-TILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 394 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 394 (551)
...|+|.+ +.+| ++++++++|| ++||+|| ++|||+|..+++.|.+++++|+++ +++||+||+|. ....++|++
T Consensus 7 ~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~--~v~vigIS~D~-~~~~~~~~~ 82 (233)
T 2v2g_A 7 EVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR--GVKLIALSCDN-VADHKEWSE 82 (233)
T ss_dssp CBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSC-HHHHHHHHH
T ss_pred CCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc--CCEEEEEcCCC-HHHHHHHHH
Confidence 34689988 8889 9999999998 9999998 999999999999999999999876 69999999985 456667776
Q ss_pred ------cCC-CcccccCchhhHHHHHhcCCC------------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHH
Q 008845 395 ------GMP-WLALPFGDARKASLSRKFKVS------------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEER 455 (551)
Q Consensus 395 ------~~~-~~~~~~~~d~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~ 455 (551)
+.+ .+.+|+..|....+++.||+. .+|++||||++|+|+....... ..+++
T Consensus 83 ~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~----------~~gr~ 152 (233)
T 2v2g_A 83 DVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPA----------TTGRN 152 (233)
T ss_dssp HHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECT----------TBCCC
T ss_pred HHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCC----------CCCCC
Confidence 452 478899999999999999985 5799999999999999853221 11234
Q ss_pred HHHHHHHHHHHh
Q 008845 456 MKEIDGQYNEMA 467 (551)
Q Consensus 456 ~~~l~~~l~~~~ 467 (551)
.+++.+.|+.+.
T Consensus 153 ~~eilr~l~~Lq 164 (233)
T 2v2g_A 153 FSEILRVIDSLQ 164 (233)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566666666654
No 122
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.70 E-value=3.2e-17 Score=157.20 Aligned_cols=137 Identities=10% Similarity=0.166 Sum_probs=110.6
Q ss_pred CCcccee-cC-CCC--eeeccc-CCCCEEEEEEe-cCCChhHH-hhhHHHHHHHHHHhhcCCCe-EEEEEeCCCChHHHH
Q 008845 319 GDLDFVV-GK-NGG--KVPVSD-LAGKTILLYFS-AHWCPPCR-AFLPKLIDAYKKIKERNESL-EVVFISSDRDQTSFD 390 (551)
Q Consensus 319 ~~~~f~~-~~-~g~--~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~-~vv~vs~d~~~~~~~ 390 (551)
..|+|.+ +. +|+ .+++++ ++||++||+|| ++|||+|+ .++|.|++++++++++ ++ +|++||+|. ....+
T Consensus 8 ~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~--~~~~vv~is~d~-~~~~~ 84 (241)
T 1nm3_A 8 KVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY--GVDDILVVSVND-TFVMN 84 (241)
T ss_dssp BCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT--TCCEEEEEESSC-HHHHH
T ss_pred CCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEEcCC-HHHHH
Confidence 4589988 64 677 999999 89999999999 99999999 9999999999999875 69 999999984 67888
Q ss_pred HHHhcCCCcccccCchhhHHHHHhcCCC-----------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHH
Q 008845 391 EFFKGMPWLALPFGDARKASLSRKFKVS-----------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEI 459 (551)
Q Consensus 391 ~~~~~~~~~~~~~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l 459 (551)
+|.++++...+|++.|.++.+++.||+. ..|+++|| ++|+|++...+... ..-|+...+.+++
T Consensus 85 ~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~-----~~~~~~~~~~~~i 158 (241)
T 1nm3_A 85 AWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNE-----PGDPFKVSDADTM 158 (241)
T ss_dssp HHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSC-----SSCCCSSSSHHHH
T ss_pred HHHHhcCCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEeccC-----CCccceecCHHHH
Confidence 9999988656999999999999999986 35899999 99999998543210 0012223566666
Q ss_pred HHHHH
Q 008845 460 DGQYN 464 (551)
Q Consensus 460 ~~~l~ 464 (551)
.+.|+
T Consensus 159 l~~l~ 163 (241)
T 1nm3_A 159 LKYLA 163 (241)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 66654
No 123
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.70 E-value=2.5e-17 Score=149.04 Aligned_cols=116 Identities=13% Similarity=0.277 Sum_probs=99.2
Q ss_pred CCcccee-cC----CC-----CeeecccC-CCC-EEEEEEecCCChhHHhh-hHHHHHHHHHHhhcCCCeE-EEEEeCCC
Q 008845 319 GDLDFVV-GK----NG-----GKVPVSDL-AGK-TILLYFSAHWCPPCRAF-LPKLIDAYKKIKERNESLE-VVFISSDR 384 (551)
Q Consensus 319 ~~~~f~~-~~----~g-----~~v~l~~~-~gk-~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~-vv~vs~d~ 384 (551)
..|+|.+ +. +| +.++++++ +|| +||++||++|||+|+.+ +|.|++++++|+++ +++ |++||+|
T Consensus 12 ~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~--g~~~vv~Is~d- 88 (171)
T 2pwj_A 12 AASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK--GVDSVICVAIN- 88 (171)
T ss_dssp CSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT--TCSEEEEEESS-
T ss_pred cCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCC-
Confidence 4689988 65 47 89999996 996 67778999999999999 99999999999876 688 9999997
Q ss_pred ChHHHHHHHhcCCC-cccccCchhhHHHHHhcCCCC-----------cceEEEECCCCcEEEcccc
Q 008845 385 DQTSFDEFFKGMPW-LALPFGDARKASLSRKFKVSG-----------IPMLVAIGPSGRTITKEAR 438 (551)
Q Consensus 385 ~~~~~~~~~~~~~~-~~~~~~~d~~~~l~~~~~v~~-----------~P~~~lid~~G~i~~~~~~ 438 (551)
+....++|.++++. +++|++.|.++.+++.||+.. .|+.++|| +|+|++...+
T Consensus 89 ~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~ 153 (171)
T 2pwj_A 89 DPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNVE 153 (171)
T ss_dssp CHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEee
Confidence 45788899999886 579999999999999999863 56888888 9999998543
No 124
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.69 E-value=1.2e-17 Score=131.31 Aligned_cols=80 Identities=59% Similarity=1.174 Sum_probs=75.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhccCCcccccCCc-ceeeeeecCCceecCCCCCCCCceeEecccCCCCcccccccCCC
Q 008845 445 GAEAYPFTEERMKEIDGQYNEMAKGWPENVKHALH-EHELVLDRCGVYSCDGCDEEGRVWAFSCDECDFCLHPNCALGED 523 (551)
Q Consensus 445 g~~~~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~c~~~g~~~~~~~~~~~~~~~~~~~~~~~ 523 (551)
|+++||||++.+.+|.+.+.+.-+.+|..++|..| +|+|.|....+|.|+.|++.+.+|.|+|..|+|+||+.||+...
T Consensus 1 ~~~a~pfte~~~~~~~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~~~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTRVQVYTCDKCEEEGTIWSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp CCCCCCCCSSCCSHHHHHHHHHTSSSCSEECCSTTTTSCEEEECCSSCCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSS
T ss_pred CCcccccCHHHHHHHHHHHhHHHHcCCceecCCCCCCCccEEeeCCCeEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCC
Confidence 67899999999999999999999999999999999 79999998889999999999999999999999999999998755
Q ss_pred C
Q 008845 524 K 524 (551)
Q Consensus 524 ~ 524 (551)
.
T Consensus 81 ~ 81 (89)
T 1v5n_A 81 T 81 (89)
T ss_dssp C
T ss_pred c
Confidence 4
No 125
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.68 E-value=4.3e-16 Score=137.77 Aligned_cols=104 Identities=30% Similarity=0.512 Sum_probs=94.9
Q ss_pred cCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhh
Q 008845 9 LLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSET 87 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (551)
.|+.+++++++|| ++|+||++||++|+.++|.|.+++++++..+ +.++.|+++.+.+.+.+++.++++.+..+.+..
T Consensus 17 ~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~-~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~- 94 (152)
T 3gl3_A 17 KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG-FQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPK- 94 (152)
T ss_dssp SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT-EEEEEEECCSSHHHHHHHHHHSCCCSEEEECTT-
T ss_pred CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCC-eEEEEEECCCCHHHHHHHHHHcCCCCceeECCc-
Confidence 7889999999999 9999999999999999999999999998764 999999999999999999999998776666655
Q ss_pred HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 88 RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 88 ~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
..+.+.|++.++|+++++|++|+++..
T Consensus 95 -~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 95 -GQTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp -CHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred -chhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 368999999999999999999999874
No 126
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.68 E-value=1.8e-16 Score=140.61 Aligned_cols=105 Identities=23% Similarity=0.360 Sum_probs=89.6
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++. ++.+++|++|...+.+++|..+.++. .+.+..
T Consensus 23 ~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~~~~~~--~~~d~~ 99 (152)
T 2lrt_A 23 LKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSADNLPWV--CVRDAN 99 (152)
T ss_dssp TTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHTTCSSE--EEECSS
T ss_pred CCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHhCCCce--EEECCC
Confidence 46889999999999 999999999999999999999999999876 49999999999988889888764433 233333
Q ss_pred h-HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 87 T-RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 87 ~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
. ...+.+.|++.++|+++++|++|+++.+
T Consensus 100 ~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (152)
T 2lrt_A 100 GAYSSYISLYNVTNLPSVFLVNRNNELSAR 129 (152)
T ss_dssp GGGCHHHHHHTCCSCSEEEEEETTTEEEEE
T ss_pred CcchHHHHHcCcccCceEEEECCCCeEEEe
Confidence 2 1248899999999999999999999985
No 127
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.68 E-value=4.8e-17 Score=143.10 Aligned_cols=107 Identities=21% Similarity=0.297 Sum_probs=94.3
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCC-ccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWL-AVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~-~~~~~~~ 85 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++. ++.++.|+++.+.+.+++|++++++. +..+.+.
T Consensus 19 ~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~ 97 (148)
T 3hcz_A 19 TTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDS 97 (148)
T ss_dssp TTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECT
T ss_pred CCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceEEecc
Confidence 46889999999999 999999999999999999999999999876 49999999998889999999999877 4445554
Q ss_pred hhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.....+.+.|++.++|+++++|++|+++..
T Consensus 98 ~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 127 (148)
T 3hcz_A 98 KNHTDFKITYDIYATPVLYVLDKNKVIIAK 127 (148)
T ss_dssp TCCCCHHHHHCCCSSCEEEEECTTCBEEEE
T ss_pred ccchhHHHhcCcCCCCEEEEECCCCcEEEe
Confidence 432338899999999999999999999975
No 128
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.68 E-value=1.8e-16 Score=140.13 Aligned_cols=105 Identities=25% Similarity=0.462 Sum_probs=93.6
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.+++++++.. ++.++.|+++.+.+.+++|++++++.+..+.+..
T Consensus 14 ~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~ 92 (151)
T 2f9s_A 14 TNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ-GVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTD 92 (151)
T ss_dssp TTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETT
T ss_pred CCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCceEEECCc
Confidence 46889999999999 999999999999999999999999999875 4999999999899999999999887665555543
Q ss_pred hHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 87 TRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 87 ~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
..+.+.|++.++|+++++|++|+++..
T Consensus 93 --~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 93 --RQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp --SHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred --hHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 368899999999999999999999874
No 129
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.68 E-value=4e-16 Score=149.49 Aligned_cols=103 Identities=14% Similarity=0.180 Sum_probs=87.6
Q ss_pred ccCc--eeeccc-CCCc-EEEEEe-cCCCHhhH-hhhHHHHHHHHHhcCCCCE-EEEEEeCCCCHHHHHHHHhhCCCC-c
Q 008845 8 ELLL--RVKLDS-LKGK-IGLYFS-ASWCGPCQ-RFTPILAEVYNELSRQGDF-EVIFVSGDEDDEAFKGYFSKMPWL-A 79 (551)
Q Consensus 8 ~~~~--~v~l~~-~~gk-vlv~F~-a~wC~~C~-~~~p~l~~~~~~~~~~~~~-~vv~v~~d~~~~~~~~~~~~~~~~-~ 79 (551)
+.|+ .+++++ ++|| ++|+|| ++||++|+ .++|.|+++++++++.+ + .|++|+.| +.+..++|.++++.. +
T Consensus 18 ~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~-~~~vv~is~d-~~~~~~~~~~~~~~~~~ 95 (241)
T 1nm3_A 18 QGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG-VDDILVVSVN-DTFVMNAWKEDEKSENI 95 (241)
T ss_dssp ETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT-CCEEEEEESS-CHHHHHHHHHHTTCTTS
T ss_pred cCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEEcC-CHHHHHHHHHhcCCCce
Confidence 4566 899999 8999 999999 99999999 99999999999998764 8 99999998 577889999998876 4
Q ss_pred cccCChhhHHHHHhhcCCC-----------CCcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 115 (551)
..+.|.+ ..+.+.|++. ..|+++++ ++|+|+..
T Consensus 96 ~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~ 139 (241)
T 1nm3_A 96 SFIPDGN--GEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKM 139 (241)
T ss_dssp EEEECTT--SHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEE
T ss_pred EEEECCC--cHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEE
Confidence 4455654 4688999986 35999999 99999975
No 130
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.68 E-value=1.2e-16 Score=150.83 Aligned_cols=136 Identities=17% Similarity=0.232 Sum_probs=106.2
Q ss_pred cCCcccee-cCCCCeeecccCCCC--EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHh
Q 008845 318 SGDLDFVV-GKNGGKVPVSDLAGK--TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 394 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l~~~~gk--~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 394 (551)
...|+|.+ +.+| .+++++++|| .||++||++||++|..+++.|++++++|+++ +++||+||+|.. ....+|++
T Consensus 9 ~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~IS~D~~-~~~~~~~~ 84 (224)
T 1prx_A 9 DVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKR--NVKLIALSIDSV-EDHLAWSK 84 (224)
T ss_dssp CBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTT--TEEEEEEESSCH-HHHHHHHH
T ss_pred CCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEcCCCH-HHHHHHHH
Confidence 34589988 8889 9999999998 5666678999999999999999999999875 699999999853 45556655
Q ss_pred cC---------CCcccccCchhhHHHHHhcCCC------------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCH
Q 008845 395 GM---------PWLALPFGDARKASLSRKFKVS------------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTE 453 (551)
Q Consensus 395 ~~---------~~~~~~~~~d~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 453 (551)
.. ..+.+|+..|.+..+++.||+. .+|++||||++|+|+....... ..+
T Consensus 85 ~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~----------~~g 154 (224)
T 1prx_A 85 DINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPA----------TTG 154 (224)
T ss_dssp HHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCT----------TBC
T ss_pred HHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCC----------CCC
Confidence 31 3478899999889999999984 3799999999999999843211 112
Q ss_pred HHHHHHHHHHHHHh
Q 008845 454 ERMKEIDGQYNEMA 467 (551)
Q Consensus 454 ~~~~~l~~~l~~~~ 467 (551)
++.+++.+.|+.+.
T Consensus 155 r~~~eil~~i~~l~ 168 (224)
T 1prx_A 155 RNFDEILRVVISLQ 168 (224)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 34566667666654
No 131
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.67 E-value=9.9e-17 Score=149.42 Aligned_cols=132 Identities=9% Similarity=0.045 Sum_probs=107.0
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEecCC-ChhHH-----hhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHH
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHW-CPPCR-----AFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 391 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~-----~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~ 391 (551)
..|+|.+ +.+|+.++|++++||++||+||++| ||+|. .+++.|.++ + .+++||+||+| ++...++
T Consensus 27 ~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~----~gv~VvgIS~D-s~~~~~~ 98 (224)
T 3keb_A 27 YLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W----PHLKLIVITVD-SPSSLAR 98 (224)
T ss_dssp BCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C----TTSEEEEEESS-CHHHHHH
T ss_pred CCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c----CCCEEEEEECC-CHHHHHH
Confidence 4589998 9999999999999999999999988 99999 888888776 3 25899999998 5678889
Q ss_pred HHhcCCCcccccCchh-hHHHHHhcCCCC---------cceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHH
Q 008845 392 FFKGMPWLALPFGDAR-KASLSRKFKVSG---------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDG 461 (551)
Q Consensus 392 ~~~~~~~~~~~~~~d~-~~~l~~~~~v~~---------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~ 461 (551)
|.++++...+|++.|. ...+++.|||.. .|++||||++|+|++...... +....+.+++.+
T Consensus 99 f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~---------~~~~pd~~evl~ 169 (224)
T 3keb_A 99 ARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLAN---------TRDFFDFDAIEK 169 (224)
T ss_dssp HHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSB---------TTCCCCHHHHHH
T ss_pred HHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCC---------CCCCCCHHHHHH
Confidence 9998885479999997 689999999975 799999999999999854332 122334455566
Q ss_pred HHHHHh
Q 008845 462 QYNEMA 467 (551)
Q Consensus 462 ~l~~~~ 467 (551)
.|+++.
T Consensus 170 ~L~~l~ 175 (224)
T 3keb_A 170 LLQEGE 175 (224)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 665554
No 132
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.67 E-value=4.4e-16 Score=137.71 Aligned_cols=106 Identities=27% Similarity=0.514 Sum_probs=93.2
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++. ++.++.|+++.+.+.+++|+++.++.+.++....
T Consensus 18 ~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~ 96 (152)
T 2lja_A 18 INGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGK-DIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGT 96 (152)
T ss_dssp TTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS-SEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC-CeEEEEEEccCcHHHHHHHHHhcCCCCceeecCc
Confidence 46889999999999 999999999999999999999999999865 4999999999998999999999887765544322
Q ss_pred hHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 87 TRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 87 ~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
. ..+.+.|++.++|+++++|++|+++..
T Consensus 97 ~-~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 97 D-RTFMDAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp C-THHHHHTTCCSSCCEEEECTTSCEEES
T ss_pred c-hhHHHHcCcCCCCEEEEECCCCeEEEc
Confidence 2 468899999999999999999999985
No 133
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.66 E-value=5.5e-16 Score=157.86 Aligned_cols=189 Identities=18% Similarity=0.209 Sum_probs=125.2
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCC--
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMG-- 99 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~-- 99 (551)
++|+||++||++|+.+.|.|.+++++++. .+.++.|+++.... ..+++.|++.+
T Consensus 138 ~~v~F~~~~~~~~~~~~~~~~~~A~~~~~--~i~f~~vd~~~~~~----------------------~~~~~~fgi~~~~ 193 (361)
T 3uem_A 138 HILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFIFIDSDHTDN----------------------QRILEFFGLKKEE 193 (361)
T ss_dssp EEEEECCSSSSSHHHHHHHHHHHHGGGTT--TCEEEEECTTSGGG----------------------HHHHHHTTCCTTT
T ss_pred EEEEEEeCCchhHHHHHHHHHHHHHHccC--ceEEEEecCChHHH----------------------HHHHHHcCCCccC
Confidence 78999999999999999999999999985 47777777763222 46889999988
Q ss_pred CcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccC--CcceeecCCCceeeccc-
Q 008845 100 IPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSH--SRDFVISSDGRKISVSD- 176 (551)
Q Consensus 100 ~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~- 176 (551)
+|++++++.++... .+.......+.+.|.++++........+...+-.... ..+.+...+++.+....
T Consensus 194 ~P~~~~~~~~~~~~---------ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~ 264 (361)
T 3uem_A 194 CPAVRLITLEEEMT---------KYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAF 264 (361)
T ss_dssp CSEEEEEECC--CC---------EECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHT
T ss_pred CccEEEEEcCCccc---------ccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcc
Confidence 99999997543221 1211222456777877776543211111111100000 01112222232222211
Q ss_pred cCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcC
Q 008845 177 LEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFE 256 (551)
Q Consensus 177 ~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~ 256 (551)
..++.++++|+++||++|+.+.|.+.+++..+++.. + ++++.+|.+. .. ++.|+
T Consensus 265 ~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~-~--v~~~~vd~~~---------------------~~--~~~~~ 318 (361)
T 3uem_A 265 DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHE-N--IVIAKMDSTA---------------------NE--VEAVK 318 (361)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCS-S--EEEEEEETTT---------------------CB--CSSCC
T ss_pred cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCC-c--EEEEEEECCc---------------------cc--hhhcC
Confidence 367899999999999999999999999999988653 2 6666666653 11 46789
Q ss_pred cCCcceEEEECCC
Q 008845 257 LSTLPTLVIIGPD 269 (551)
Q Consensus 257 v~~~P~lvi~~~~ 269 (551)
|.++||++++..+
T Consensus 319 v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 319 VHSFPTLKFFPAS 331 (361)
T ss_dssp CCSSSEEEEECSS
T ss_pred CcccCeEEEEECC
Confidence 9999999999654
No 134
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.66 E-value=6.2e-16 Score=138.73 Aligned_cols=104 Identities=24% Similarity=0.375 Sum_probs=92.7
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|.++++++++. ++.++.|+++.+.+.+++|++++++.+..+.+..
T Consensus 22 ~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 100 (165)
T 3or5_A 22 VDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR-GFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATP 100 (165)
T ss_dssp TTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-TEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCH
T ss_pred CCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCCceEecCH
Confidence 57889999999999 999999999999999999999999999876 4999999999999999999999987766666554
Q ss_pred hHHHHHhhc------CCCCCcEEEEEcCCCeEEEc
Q 008845 87 TRDKLDELF------KVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 87 ~~~~l~~~~------~v~~~P~~~lid~~G~i~~~ 115 (551)
.+.+.| ++.++|+++++|++|+++..
T Consensus 101 ---~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 101 ---ELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp ---HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred ---HHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 466667 89999999999999999874
No 135
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.66 E-value=1.5e-15 Score=136.00 Aligned_cols=104 Identities=24% Similarity=0.279 Sum_probs=93.8
Q ss_pred ccCceeecccCCCc--EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCC
Q 008845 8 ELLLRVKLDSLKGK--IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk--vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (551)
.+|+.+++++++|| ++|+|| ++||++|+.++|.|.++++++++.+ +.+++|+.| +.+.+++|++++++.+..+.+
T Consensus 16 ~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~-v~vv~vs~d-~~~~~~~~~~~~~~~~~~~~d 93 (161)
T 3drn_A 16 DNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD-VVVIGVSSD-DINSHKRFKEKYKLPFILVSD 93 (161)
T ss_dssp TTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTC-EEEEEEESC-CHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcC-CEEEEEeCC-CHHHHHHHHHHhCCCceEEEC
Confidence 47899999999999 899999 9999999999999999999999774 999999998 688999999999987666666
Q ss_pred hhhHHHHHhhcCCCC----CcEEEEEcCCCeEEEc
Q 008845 85 SETRDKLDELFKVMG----IPHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~~~~~~l~~~~~v~~----~P~~~lid~~G~i~~~ 115 (551)
.. ..+.+.|++.+ +|+++|+|++|+|+..
T Consensus 94 ~~--~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 94 PD--KKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp TT--SHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred Cc--HHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 44 46899999999 9999999999999875
No 136
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.66 E-value=1.7e-16 Score=149.34 Aligned_cols=136 Identities=15% Similarity=0.202 Sum_probs=105.1
Q ss_pred cCCcccee-cC--CCCeeecccCCCC-E-EEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHH
Q 008845 318 SGDLDFVV-GK--NGGKVPVSDLAGK-T-ILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 392 (551)
Q Consensus 318 ~~~~~f~~-~~--~g~~v~l~~~~gk-~-vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 392 (551)
...|+|.+ +. +| ++++++++|| + ||++||++||++|..+++.|++++++|+++ +++||+||+|.. ....+|
T Consensus 7 ~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~vS~D~~-~~~~~~ 82 (220)
T 1xcc_A 7 ATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL--NCKLIGFSCNSK-ESHDKW 82 (220)
T ss_dssp CBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCH-HHHHHH
T ss_pred CCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCCH-HHHHHH
Confidence 34689988 77 88 9999999998 4 555568999999999999999999999875 699999999853 445555
Q ss_pred Hhc------CCCcccccCchhhHHHHHhcCCC------------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHH
Q 008845 393 FKG------MPWLALPFGDARKASLSRKFKVS------------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEE 454 (551)
Q Consensus 393 ~~~------~~~~~~~~~~d~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 454 (551)
.+. ...+.+|+..|.+..+++.||+. .+|++||||++|+|+....... -.++
T Consensus 83 ~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~----------~~g~ 152 (220)
T 1xcc_A 83 IEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPA----------TTGR 152 (220)
T ss_dssp HHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECT----------TBCC
T ss_pred HHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCC----------CCCC
Confidence 541 23478899999999999999984 4799999999999999853221 0123
Q ss_pred HHHHHHHHHHHHh
Q 008845 455 RMKEIDGQYNEMA 467 (551)
Q Consensus 455 ~~~~l~~~l~~~~ 467 (551)
+.++|.+.|+.+.
T Consensus 153 ~~~ell~~i~~lq 165 (220)
T 1xcc_A 153 NAHEILRVLKSLQ 165 (220)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4566666666654
No 137
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.9e-16 Score=144.21 Aligned_cols=140 Identities=19% Similarity=0.191 Sum_probs=112.3
Q ss_pred hhccCCcccee----cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHH
Q 008845 315 VLVSGDLDFVV----GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSF 389 (551)
Q Consensus 315 ~~~~~~~~f~~----~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~ 389 (551)
......|+|.+ +.++++++|++++||++||+|| +.||+.|..+++.|++.+.+|++. +++|++||+|. ....
T Consensus 24 ~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~--g~~vigiS~Ds-~~sh 100 (216)
T 3sbc_A 24 QVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ--GAQVLFASTDS-EYSL 100 (216)
T ss_dssp CTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT--TEEEEEEESSC-HHHH
T ss_pred hcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC--CceEEEeecCc-hhhH
Confidence 34456799964 5677899999999999999999 999999999999999999999876 69999999985 3566
Q ss_pred HHHHhcC------CCcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHH
Q 008845 390 DEFFKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMK 457 (551)
Q Consensus 390 ~~~~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~ 457 (551)
.+|.... ..+++|++.|.++++++.|||- ..+.+||||++|+|++...... -.+++++
T Consensus 101 ~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~----------~~grn~d 170 (216)
T 3sbc_A 101 LAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDL----------PVGRNVD 170 (216)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT----------TBCCCHH
T ss_pred HHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCC----------CCCCCHH
Confidence 6666543 2478999999999999999983 4689999999999998743211 2345667
Q ss_pred HHHHHHHHHh
Q 008845 458 EIDGQYNEMA 467 (551)
Q Consensus 458 ~l~~~l~~~~ 467 (551)
++++.|+.+-
T Consensus 171 EiLr~l~AlQ 180 (216)
T 3sbc_A 171 EALRLVEAFQ 180 (216)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 7777776653
No 138
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.65 E-value=4.8e-16 Score=142.27 Aligned_cols=104 Identities=15% Similarity=0.237 Sum_probs=90.9
Q ss_pred cCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCE------EEEEEeCCC-CHHHHHHHHhhCCCCcc
Q 008845 9 LLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDF------EVIFVSGDE-DDEAFKGYFSKMPWLAV 80 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~------~vv~v~~d~-~~~~~~~~~~~~~~~~~ 80 (551)
+|+.+++++++|| +||+||++||++|+.++|.|.++++++++.+ + .++.|+++. +.+.+++|+++++..+.
T Consensus 48 ~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~-~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~ 126 (183)
T 3lwa_A 48 EGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAG-NGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYP 126 (183)
T ss_dssp TTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC----CCSEEEEEEECSCCCHHHHHHHHHHTTCCSC
T ss_pred CCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcC-CCccCCcEEEEEECCCCCHHHHHHHHHHcCCCcc
Confidence 7899999999999 9999999999999999999999999998764 7 999999998 89999999999988776
Q ss_pred ccCChhhHHHHHhhc---CCCCCcEEEEEcCCCeEEEc
Q 008845 81 PFSDSETRDKLDELF---KVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~---~v~~~P~~~lid~~G~i~~~ 115 (551)
.+.+... .+.+.| ++.++|++++||++|+++..
T Consensus 127 ~~~d~~~--~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 127 SIYDPPF--MTAASLGGVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp EEECTTC--GGGGGTTTCCTTCCSEEEEECTTSCEEEE
T ss_pred EEECCcc--hHHHHhccCCCCCCCeEEEECCCCcEEEE
Confidence 6666543 355555 58999999999999999874
No 139
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.65 E-value=1.2e-15 Score=131.95 Aligned_cols=101 Identities=21% Similarity=0.285 Sum_probs=91.3
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.+.+++++++ ++.++.|+++.+.+.+++|++++++.+..+.+..
T Consensus 12 ~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~ 88 (136)
T 1lu4_A 12 LSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD 88 (136)
T ss_dssp TTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT
T ss_pred CCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc
Confidence 46889999999999 9999999999999999999999999987 4899999999999999999999988666555544
Q ss_pred hHHHHHhhcCCCCCcEEEEEcCCCeEE
Q 008845 87 TRDKLDELFKVMGIPHLVILDENGKVL 113 (551)
Q Consensus 87 ~~~~l~~~~~v~~~P~~~lid~~G~i~ 113 (551)
..+.+.|++.++|+++++|++|+++
T Consensus 89 --~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 89 --GVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp --SHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred --hhHHHhcCCCCCCEEEEECCCCcEE
Confidence 4688999999999999999999998
No 140
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.65 E-value=9e-16 Score=134.27 Aligned_cols=104 Identities=19% Similarity=0.379 Sum_probs=92.0
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC---CHHHHHHHHhhCCCCccccC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DDEAFKGYFSKMPWLAVPFS 83 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~---~~~~~~~~~~~~~~~~~~~~ 83 (551)
.+|+.+++++ +|| ++|+||++||++|+.++|.|.+++++++.. ++.++.|+++. +.+.+++|+++++..+..+.
T Consensus 23 ~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 100 (145)
T 3erw_A 23 IEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD-SVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVL 100 (145)
T ss_dssp TTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS-SEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEE
T ss_pred CCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC-CEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEE
Confidence 4688999999 999 999999999999999999999999999865 49999999985 88999999999987766555
Q ss_pred ChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 84 DSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+.. ..+.+.|++.++|+++++|++|+++..
T Consensus 101 d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 130 (145)
T 3erw_A 101 DSK--GELMKEYHIITIPTSFLLNEKGEIEKT 130 (145)
T ss_dssp CSS--SHHHHHTTCCEESEEEEECTTCCEEEE
T ss_pred cCc--hhHHHhcCcCccCeEEEEcCCCcEEEE
Confidence 544 368999999999999999999999874
No 141
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.65 E-value=6.9e-16 Score=145.42 Aligned_cols=106 Identities=14% Similarity=0.198 Sum_probs=94.6
Q ss_pred ccCceeecccCCCc--EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHhhCCCC
Q 008845 8 ELLLRVKLDSLKGK--IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFSKMPWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk--vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~~~~~~ 78 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++++.+ +.|++|++| .+.+.+++|+++++..
T Consensus 46 ~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~-v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~ 124 (218)
T 3u5r_E 46 AGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQG-LAVVAINSNDAQAFPEETLERVGAEVKAYGYG 124 (218)
T ss_dssp TTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTT-EEEEEEECSCTTTCGGGSHHHHHHHHHHHTCC
T ss_pred CCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCC-cEEEEEECCcccccccCCHHHHHHHHHHhCCC
Confidence 57889999999999 8999999999999999999999999998764 999999996 6889999999999887
Q ss_pred ccccCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEcC
Q 008845 79 AVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSDG 116 (551)
Q Consensus 79 ~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 116 (551)
+..+.|.. ..+.+.|++.++|+++|||++|+|+.+.
T Consensus 125 ~~~l~D~~--~~~~~~~~v~~~P~~~liD~~G~i~~~g 160 (218)
T 3u5r_E 125 FPYLKDAS--QSVAKAYGAACTPDFFLYDRERRLVYHG 160 (218)
T ss_dssp SCEEECTT--CHHHHHHTCCEESEEEEECTTCBEEEEE
T ss_pred ccEEECCc--cHHHHHcCCCCCCeEEEECCCCcEEEec
Confidence 66666654 4689999999999999999999999753
No 142
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.64 E-value=2.7e-16 Score=149.86 Aligned_cols=136 Identities=14% Similarity=0.187 Sum_probs=105.9
Q ss_pred cCCcccee-cCCCCeeec-ccC--CCCEE-EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHH
Q 008845 318 SGDLDFVV-GKNGGKVPV-SDL--AGKTI-LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 392 (551)
Q Consensus 318 ~~~~~f~~-~~~g~~v~l-~~~--~gk~v-ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 392 (551)
...|+|.+ +.+| ++++ +++ +||++ |++||++||++|..+++.|.+++++|+++ +++||+||+|.. ....+|
T Consensus 9 ~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~--gv~VI~VS~Ds~-~~~~~w 84 (249)
T 3a2v_A 9 ERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL--GVDLIGLSVDSV-FSHIKW 84 (249)
T ss_dssp SBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSCH-HHHHHH
T ss_pred CCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC--CcEEEEEECCCH-HHHHHH
Confidence 44689988 7777 7999 999 99964 56789999999999999999999999876 699999999854 334444
Q ss_pred Hhc----C-CCcccccCchhhHHHHHhcCCC-------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHH
Q 008845 393 FKG----M-PWLALPFGDARKASLSRKFKVS-------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 460 (551)
Q Consensus 393 ~~~----~-~~~~~~~~~d~~~~l~~~~~v~-------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 460 (551)
.+. . ..+.+|+..|.+..+++.||+. ++|++||||++|+|+....+.. -.+++.++|.
T Consensus 85 ~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~----------~~gr~~~Ell 154 (249)
T 3a2v_A 85 KEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPM----------ELGRLVDEIL 154 (249)
T ss_dssp HHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECT----------TBCCCHHHHH
T ss_pred HHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCC----------cccchhHHHH
Confidence 432 1 1478889999999999999997 8999999999999999843221 0123456666
Q ss_pred HHHHHHh
Q 008845 461 GQYNEMA 467 (551)
Q Consensus 461 ~~l~~~~ 467 (551)
+.|+.+.
T Consensus 155 r~I~alq 161 (249)
T 3a2v_A 155 RIVKALK 161 (249)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
No 143
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.64 E-value=8.9e-16 Score=134.79 Aligned_cols=104 Identities=18% Similarity=0.200 Sum_probs=91.2
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC-----CHHHHHHHHhhCCCCccc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-----DDEAFKGYFSKMPWLAVP 81 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~-----~~~~~~~~~~~~~~~~~~ 81 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++. +.++.|+++. +.+.+++|+++++..+..
T Consensus 17 ~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (148)
T 2b5x_A 17 LNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ--LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPI 94 (148)
T ss_dssp ESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCE
T ss_pred ccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC--cEEEEEEcCCCccccCHHHHHHHHHHcCCCcce
Confidence 46889999999999 999999999999999999999999999753 8999999876 788999999999876655
Q ss_pred cCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 82 FSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 82 ~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+.+.. ..+.+.|++.++|+++++|++|+++..
T Consensus 95 ~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 95 FVDSD--HALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp EECSS--CHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred EECCc--hhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 55543 368899999999999999999999874
No 144
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.64 E-value=7.6e-16 Score=138.34 Aligned_cols=101 Identities=24% Similarity=0.394 Sum_probs=91.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC------------------CCHHHH
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD------------------EDDEAF 68 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d------------------~~~~~~ 68 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|.+++++++ ++.++.|+++ .+.+.+
T Consensus 25 ~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ 101 (165)
T 3ha9_A 25 IDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMF 101 (165)
T ss_dssp TTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHH
T ss_pred CCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHH
Confidence 47899999999999 9999999999999999999999999997 5999999999 789999
Q ss_pred HHHHhhCCC-CccccCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEE
Q 008845 69 KGYFSKMPW-LAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 114 (551)
Q Consensus 69 ~~~~~~~~~-~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 114 (551)
++|++++++ .+..+.+ . ..+.+.|++.++|+++++|++|+++.
T Consensus 102 ~~~~~~~~~~~~~~~~d-~--~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 102 RKFIANYGDPSWIMVMD-D--GSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp HHHHHHHSCTTSEEEEC-C--SHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred HHHHHHcCCCCeeEEeC-h--HHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 999999988 5555555 2 46999999999999999999999997
No 145
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.64 E-value=9.1e-16 Score=139.54 Aligned_cols=98 Identities=20% Similarity=0.350 Sum_probs=87.1
Q ss_pred ceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccc-cCChhhH
Q 008845 11 LRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVP-FSDSETR 88 (551)
Q Consensus 11 ~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~ 88 (551)
+.+++++++|| +||+||++||++|+.++|.|++++++ ++.+++|+++.+.+.+++|++++++.+.. +.+..
T Consensus 49 ~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~-- 121 (176)
T 3kh7_A 49 RRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDAD-- 121 (176)
T ss_dssp SEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETT--
T ss_pred ceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCc--
Confidence 78999999999 99999999999999999999999876 38999999999999999999999877664 33333
Q ss_pred HHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 89 DKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 89 ~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
..+.+.|++.++|++++||++|+++..
T Consensus 122 ~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 122 GTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp CHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred chHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 468899999999999999999999974
No 146
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.64 E-value=1.2e-15 Score=131.77 Aligned_cols=101 Identities=25% Similarity=0.380 Sum_probs=89.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCC-CccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPW-LAVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~~ 85 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.+.+++++++ ++.++.|+++.+.+.+++++++++. .+..+.+.
T Consensus 13 ~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~ 89 (136)
T 1zzo_A 13 LDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADT 89 (136)
T ss_dssp TTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECT
T ss_pred CCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcC
Confidence 46899999999999 9999999999999999999999999987 4899999999999999999999987 44444443
Q ss_pred hhHHHHHhhcCCCCCcEEEEEcCCCeEE
Q 008845 86 ETRDKLDELFKVMGIPHLVILDENGKVL 113 (551)
Q Consensus 86 ~~~~~l~~~~~v~~~P~~~lid~~G~i~ 113 (551)
. ..+.+.|++.++|+++++|++|+++
T Consensus 90 ~--~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 90 D--GSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp T--CHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred C--cHHHHHcCCCCCceEEEECCCCCEE
Confidence 3 4688999999999999999999997
No 147
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.64 E-value=1.3e-14 Score=138.87 Aligned_cols=179 Identities=16% Similarity=0.199 Sum_probs=113.9
Q ss_pred ccCCCcEEEEEecCC--CHhhHhhhHHHHHHHHHhcC-CCC--EEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHH
Q 008845 16 DSLKGKIGLYFSASW--CGPCQRFTPILAEVYNELSR-QGD--FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDK 90 (551)
Q Consensus 16 ~~~~gkvlv~F~a~w--C~~C~~~~p~l~~~~~~~~~-~~~--~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (551)
+.+.+.|+|.||++| |++|+.+.|.+.++++.... +++ +.++.++++... .
T Consensus 22 ~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~------------------------~ 77 (243)
T 2hls_A 22 AEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDS------------------------D 77 (243)
T ss_dssp TTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTH------------------------H
T ss_pred HhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCH------------------------H
Confidence 444333999999999 99999999999999987531 233 778888877654 4
Q ss_pred HHhhcCCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCc
Q 008845 91 LDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGR 170 (551)
Q Consensus 91 l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 170 (551)
+++.|+|.++|++.++ +| ... ..|... ...+..++.......... .-+. .+
T Consensus 78 ~~~~~gv~~~Pt~~i~--~g-~~~--------~~G~~~----~~~l~~fv~~~l~~~~~~---~~l~-----------~~ 128 (243)
T 2hls_A 78 KFSEFKVERVPTVAFL--GG-EVR--------WTGIPA----GEEIRALVEVIMRLSEDE---SGLE-----------DA 128 (243)
T ss_dssp HHHHTTCCSSSEEEET--TT-TEE--------EESCCC----TTHHHHHHHHHHHHHTTC---CCCC-----------HH
T ss_pred HHHhcCCCcCCEEEEE--CC-cee--------EcCCCc----HHHHHHHHHHHHhccCCC---CCCC-----------HH
Confidence 8999999999999998 34 211 123221 122233322111000000 0000 00
Q ss_pred ee-eccccCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCC-CceEEEEeecccCHHHHHHHhcCCCCccccCCchhH
Q 008845 171 KI-SVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKG-ESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSR 248 (551)
Q Consensus 171 ~~-~~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~-~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~ 248 (551)
.. .+..+.++.+++.|+++|||+|+.+.|.+.+++..++.++ .+ +.+..+|.+. .
T Consensus 129 ~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~--v~~~~vd~~~---------------------~ 185 (243)
T 2hls_A 129 TKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPV--ILSEAVEAYE---------------------N 185 (243)
T ss_dssp HHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCC--EEEEEEETTT---------------------C
T ss_pred HHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCc--EEEEEEECcc---------------------C
Confidence 00 0112457788899999999999999999999998875211 23 4444444432 3
Q ss_pred HHHHhhcCcCCcceEEEECCCCCcc
Q 008845 249 EKLARYFELSTLPTLVIIGPDGKTL 273 (551)
Q Consensus 249 ~~l~~~f~v~~~P~lvi~~~~gk~~ 273 (551)
..+++.|+|.++||+++ +|+..
T Consensus 186 ~~~~~~~~V~~vPt~~i---~G~~~ 207 (243)
T 2hls_A 186 PDIADKYGVMSVPSIAI---NGYLV 207 (243)
T ss_dssp HHHHHHTTCCSSSEEEE---TTEEE
T ss_pred HHHHHHcCCeeeCeEEE---CCEEE
Confidence 46788999999999988 56543
No 148
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.64 E-value=1.5e-15 Score=134.63 Aligned_cols=105 Identities=27% Similarity=0.531 Sum_probs=93.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCC-HHHHHHHHhhCCCCccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDED-DEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~-~~~~~~~~~~~~~~~~~~~~~ 85 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++.+. ++.++.|+++.+ .+.+++|+++++..+..+.+.
T Consensus 16 ~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~ 94 (154)
T 3kcm_A 16 LNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK-PFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDA 94 (154)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECT
T ss_pred CCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecC
Confidence 57889999999999 999999999999999999999999999875 499999999987 788999999988776666555
Q ss_pred hhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
. ..+.+.|++.++|+++++|++|+++..
T Consensus 95 ~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 95 D--KRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp T--CHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred c--hHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 4 468999999999999999999999874
No 149
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.63 E-value=2.2e-15 Score=144.61 Aligned_cols=68 Identities=19% Similarity=0.427 Sum_probs=58.2
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
.++ ++|+|||+||++|+.+.|.|.++++.++... .+.++.|+++.+.. ..+++.|+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~----------------------~~l~~~~~ 86 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN----------------------SAVCRDFN 86 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT----------------------HHHHHHTT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh----------------------HHHHHHcC
Confidence 357 9999999999999999999999999998622 58999999864332 46999999
Q ss_pred CCCCcEEEEEcC
Q 008845 97 VMGIPHLVILDE 108 (551)
Q Consensus 97 v~~~P~~~lid~ 108 (551)
|.++|++++++.
T Consensus 87 v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 87 IPGFPTVRFFXA 98 (244)
T ss_dssp CCSSSEEEEECT
T ss_pred CCccCEEEEEeC
Confidence 999999999974
No 150
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.63 E-value=2.2e-15 Score=135.07 Aligned_cols=104 Identities=17% Similarity=0.225 Sum_probs=92.8
Q ss_pred ccCceeecccCCCc-EEEEEec-CCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (551)
.+|+++++++++|| ++|+||+ +||++|+.++|.|+++++++++.+ +.|++|+.| +.+.+++|.++++..+..+.|.
T Consensus 23 ~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~-~~vv~vs~d-~~~~~~~~~~~~~~~~~~~~d~ 100 (163)
T 3gkn_A 23 SGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG-AKILGVSRD-SVKSHDNFCAKQGFAFPLVSDG 100 (163)
T ss_dssp STTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT-CEEEEEESS-CHHHHHHHHHHHCCSSCEEECT
T ss_pred CCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCC-CEEEEEeCC-CHHHHHHHHHHhCCCceEEECC
Confidence 57899999999999 9999998 999999999999999999998774 999999998 7888999999988776666664
Q ss_pred hhHHHHHhhcCCCC------------CcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVMG------------IPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~~------------~P~~~lid~~G~i~~~ 115 (551)
. ..+.+.|++.. +|+++|||++|+|+..
T Consensus 101 ~--~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 140 (163)
T 3gkn_A 101 D--EALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQA 140 (163)
T ss_dssp T--CHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEE
T ss_pred c--HHHHHHhCCccccccccccccCcceEEEEECCCCeEEEE
Confidence 4 46889999987 9999999999999974
No 151
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.63 E-value=3.4e-15 Score=139.34 Aligned_cols=105 Identities=20% Similarity=0.138 Sum_probs=81.2
Q ss_pred CceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHh------hC
Q 008845 10 LLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFS------KM 75 (551)
Q Consensus 10 ~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~------~~ 75 (551)
|+.+++++++|| +||+|||+|||+|+.++|.|+++++++++.+ +.|++|++| .+.+.+++|++ ++
T Consensus 37 G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g-~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~ 115 (208)
T 2f8a_A 37 GEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRG-LVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGF 115 (208)
T ss_dssp SSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT-EEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTC
T ss_pred CCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCC-eEEEEEECCcccccCCCCHHHHHHHHHhccccccc
Confidence 899999999999 9999999999999999999999999998764 999999987 24678899997 66
Q ss_pred CCCccccCCh----hh----HHHHHhhc-------------------------CCCCCcEEEEEcCCCeEEEc
Q 008845 76 PWLAVPFSDS----ET----RDKLDELF-------------------------KVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 76 ~~~~~~~~~~----~~----~~~l~~~~-------------------------~v~~~P~~~lid~~G~i~~~ 115 (551)
+..+..+.+. .. ...+...+ ++...|+++|||++|+|+.+
T Consensus 116 ~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~ 188 (208)
T 2f8a_A 116 EPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRR 188 (208)
T ss_dssp CCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred ccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEE
Confidence 6544333211 10 01121122 36667999999999999985
No 152
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.63 E-value=7.6e-16 Score=138.04 Aligned_cols=105 Identities=16% Similarity=0.267 Sum_probs=88.9
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-----CCHHHHHHHHhhCCCCccc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-----EDDEAFKGYFSKMPWLAVP 81 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-----~~~~~~~~~~~~~~~~~~~ 81 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.+++++++..+ +.+++|+++ .+.+.+.+|+.+.++..++
T Consensus 26 ~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~-~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (164)
T 2h30_A 26 ADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSS-ANLITVASPGFLHEKKDGEFQKWYAGLNYPKLP 104 (164)
T ss_dssp TTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTT-SEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSC
T ss_pred CCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCC-cEEEEEEcCCCccccCHHHHHHHHHhCCCCcce
Confidence 46888999999999 9999999999999999999999999987764 999999985 3567888988887766333
Q ss_pred c-CChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 82 F-SDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 82 ~-~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+ .+.. ..+++.|++.++|+++++|++|+++..
T Consensus 105 ~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 105 VVTDNG--GTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp EEECTT--CHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred EEEcCc--hHHHHHcCCCccceEEEECCCCcEEEE
Confidence 3 3332 468999999999999999999999874
No 153
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.62 E-value=3.7e-15 Score=134.56 Aligned_cols=108 Identities=17% Similarity=0.258 Sum_probs=91.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHh-hHhhhHHHHHHHHHhcCC---CCEEEEEEeCCC---CHHHHHHHHhhCCCCc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGP-CQRFTPILAEVYNELSRQ---GDFEVIFVSGDE---DDEAFKGYFSKMPWLA 79 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~-C~~~~p~l~~~~~~~~~~---~~~~vv~v~~d~---~~~~~~~~~~~~~~~~ 79 (551)
.+|+.+++++++|| +||+||++||++ |+.++|.|+++++++++. .++.+++|++|. +.+.+++|+++++..+
T Consensus 14 ~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~ 93 (171)
T 2rli_A 14 HRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRL 93 (171)
T ss_dssp TTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTC
T ss_pred CCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCe
Confidence 57899999999999 999999999998 999999999999999641 269999999983 6788999999988665
Q ss_pred cccCCh-hhHHHHHhhcCCCCCc---------------EEEEEcCCCeEEEc
Q 008845 80 VPFSDS-ETRDKLDELFKVMGIP---------------HLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~-~~~~~l~~~~~v~~~P---------------~~~lid~~G~i~~~ 115 (551)
..+.+. +....+.+.|++..+| +++++|++|+++..
T Consensus 94 ~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 94 LGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp CEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred EEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 555443 3335688999999888 99999999999985
No 154
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.62 E-value=1.1e-15 Score=126.15 Aligned_cols=72 Identities=18% Similarity=0.505 Sum_probs=62.9
Q ss_pred CCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008845 337 LAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 416 (551)
Q Consensus 337 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 416 (551)
..+|+|+|+|||+||+||+.+.|.+.++++.++ ++.++.|++|..+ ++++.|+
T Consensus 18 ~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~d~~~-----------------------~l~~~~~ 70 (105)
T 3zzx_A 18 AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS----DVVFLKVDVDECE-----------------------DIAQDNQ 70 (105)
T ss_dssp TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEETTTCH-----------------------HHHHHTT
T ss_pred cCCCEEEEEEECCCCCCccCCCcchhhhhhccC----CeEEEEEecccCH-----------------------HHHHHcC
Confidence 347999999999999999999999999888775 3778888887664 6899999
Q ss_pred CCCcceEEEECCCCcEEEcc
Q 008845 417 VSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 417 v~~~P~~~lid~~G~i~~~~ 436 (551)
|+++||++++ ++|+++.+.
T Consensus 71 V~~~PT~~~~-~~G~~v~~~ 89 (105)
T 3zzx_A 71 IACMPTFLFM-KNGQKLDSL 89 (105)
T ss_dssp CCBSSEEEEE-ETTEEEEEE
T ss_pred CCeecEEEEE-ECCEEEEEE
Confidence 9999999999 799998873
No 155
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.62 E-value=4.3e-15 Score=128.38 Aligned_cols=104 Identities=29% Similarity=0.521 Sum_probs=88.4
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEe-----CCCCHHHHHHHHhhCCCCccc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVS-----GDEDDEAFKGYFSKMPWLAVP 81 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~-----~d~~~~~~~~~~~~~~~~~~~ 81 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.+.++++++.. ++.++.|+ .+.+.+.+.+|++++++..++
T Consensus 10 ~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (138)
T 4evm_A 10 VDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLP 87 (138)
T ss_dssp TTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCC
T ss_pred CCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCee
Confidence 47899999999999 99999999999999999999999998543 58888884 456788999999999873333
Q ss_pred -cCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 82 -FSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 82 -~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+.+.. ..+.+.|++.++|+++++|++|+++..
T Consensus 88 ~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 88 VLVDPS--GKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp EEECTT--CHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred EEECcc--hHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 44433 468999999999999999999999874
No 156
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.61 E-value=7.3e-16 Score=139.45 Aligned_cols=106 Identities=20% Similarity=0.266 Sum_probs=76.1
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHH-hhCCCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYF-SKMPWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~-~~~~~~ 78 (551)
.+|+++++++++|| +||+|||+||++|+ ++|.|+++++++++. ++.|++|++| .+.+.+++|+ ++++..
T Consensus 20 ~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~ 97 (171)
T 3cmi_A 20 KKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE-GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVT 97 (171)
T ss_dssp TTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG-TEEEEEEEECSCC------------------CCC
T ss_pred CCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCC
Confidence 47899999999999 99999999999999 999999999999876 4999999986 4567788898 777765
Q ss_pred ccccCChhhH----HHH-----HhhcCCCCCc------EEEEEcCCCeEEEc
Q 008845 79 AVPFSDSETR----DKL-----DELFKVMGIP------HLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~~~~~~----~~l-----~~~~~v~~~P------~~~lid~~G~i~~~ 115 (551)
+..+.+.+.. ..+ .+.|++.++| +++|||++|+++.+
T Consensus 98 ~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 98 FPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp SCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred ceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 5544432210 011 2468999999 99999999999985
No 157
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.61 E-value=2e-15 Score=139.86 Aligned_cols=139 Identities=18% Similarity=0.219 Sum_probs=112.1
Q ss_pred hccCCccce----e-cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHH
Q 008845 316 LVSGDLDFV----V-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSF 389 (551)
Q Consensus 316 ~~~~~~~f~----~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~ 389 (551)
+...+|+|. + +.+|++++|++++||+|||+|| +.||+.|..++..|.+++.+|++. +++|++||+|.. ...
T Consensus 28 vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~--g~~vigiS~Ds~-~sh 104 (219)
T 3tue_A 28 INSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL--NCEVLACSIDSE-YAH 104 (219)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT--TEEEEEEESSCH-HHH
T ss_pred cCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC--CcEEEEeeCCch-hhH
Confidence 445679996 5 7789999999999999999999 899999999999999999999876 799999999854 566
Q ss_pred HHHHhcC------CCcccccCchhhHHHHHhcCCC------CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHH
Q 008845 390 DEFFKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMK 457 (551)
Q Consensus 390 ~~~~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~ 457 (551)
.+|.... ..+.+|++.|.++++++.|||- ....+||||++|+|+...... .-..++++
T Consensus 105 ~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~----------~~~gr~~~ 174 (219)
T 3tue_A 105 LQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVND----------MPVGRSVE 174 (219)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC----------TTCCCCHH
T ss_pred HHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEec----------CCCCCCHH
Confidence 6676543 3478999999999999999983 246899999999998873221 12345667
Q ss_pred HHHHHHHHHh
Q 008845 458 EIDGQYNEMA 467 (551)
Q Consensus 458 ~l~~~l~~~~ 467 (551)
++++.|+.+-
T Consensus 175 EvLr~l~aLQ 184 (219)
T 3tue_A 175 EVLRLLEAFQ 184 (219)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 7777776653
No 158
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.61 E-value=2.4e-15 Score=137.30 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=83.3
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC-------CHHHHHHHHhh-CCCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DDEAFKGYFSK-MPWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~-------~~~~~~~~~~~-~~~~ 78 (551)
.+|+.+++++++|| +||+|||+||++|+.++|.|+++++++++.+ +.|++|++|. +.+.+++|+++ ++..
T Consensus 26 ~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~-~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~ 104 (180)
T 3kij_A 26 AKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSH-FSVLAFPCNQFGESEPRPSKEVESFARKNYGVT 104 (180)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTS-EEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCC
T ss_pred CCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCC-eEEEEEECCccccCCCCCHHHHHHHHHHhcCCC
Confidence 57899999999999 9999999999999999999999999998774 9999999875 78899999998 7655
Q ss_pred ccccC-----ChhhHHHHHhhc--CCCCCcE----EEEEcCCCeEEEc
Q 008845 79 AVPFS-----DSETRDKLDELF--KVMGIPH----LVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~-----~~~~~~~l~~~~--~v~~~P~----~~lid~~G~i~~~ 115 (551)
+..+. +... ..+...+ ...++|+ ++|||++|+++..
T Consensus 105 ~~~~~~~d~~~~~~-~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 105 FPIFHKIKILGSEG-EPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp SCBBCCCCCSSTTC-CHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEE
T ss_pred CceeeeeeccCccc-cHHHHHHHhcCCCCccccceEEEECCCCCEEEE
Confidence 44422 1111 1111111 1246788 9999999999975
No 159
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.61 E-value=3.6e-15 Score=133.61 Aligned_cols=108 Identities=20% Similarity=0.341 Sum_probs=91.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHh-hHhhhHHHHHHHHHhcCC---CCEEEEEEeCCC---CHHHHHHHHhhCCCCc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGP-CQRFTPILAEVYNELSRQ---GDFEVIFVSGDE---DDEAFKGYFSKMPWLA 79 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~-C~~~~p~l~~~~~~~~~~---~~~~vv~v~~d~---~~~~~~~~~~~~~~~~ 79 (551)
.+|+.+++++++|| ++|+||++||++ |+.++|.|+++++++++. .++.+++|++|. +.+.+++|+++++..+
T Consensus 11 ~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~ 90 (164)
T 2ggt_A 11 HTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKL 90 (164)
T ss_dssp TTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSC
T ss_pred CCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCe
Confidence 57899999999999 999999999998 999999999999999752 259999999985 4788999999987655
Q ss_pred cccC-ChhhHHHHHhhcCCCCCc---------------EEEEEcCCCeEEEc
Q 008845 80 VPFS-DSETRDKLDELFKVMGIP---------------HLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~-~~~~~~~l~~~~~v~~~P---------------~~~lid~~G~i~~~ 115 (551)
..+. +.+....+.+.|++..+| +++++|++|+++..
T Consensus 91 ~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 91 VGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp EEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred EEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 4442 234445689999999999 89999999999985
No 160
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.61 E-value=3.6e-15 Score=148.20 Aligned_cols=131 Identities=18% Similarity=0.166 Sum_probs=107.0
Q ss_pred CCcccee-cCCCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcC
Q 008845 319 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 396 (551)
Q Consensus 319 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 396 (551)
..|+|.+ +.+|++++|++++||+|||+|| +.|||.|..+++.|.+ ....+++|++||+| +....++|.+++
T Consensus 3 k~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~------~~~~~~~v~gis~D-~~~~~~~f~~~~ 75 (322)
T 4eo3_A 3 RVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR------ENFEKAQVVGISRD-SVEALKRFKEKN 75 (322)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH------SCCTTEEEEEEESC-CHHHHHHHHHHH
T ss_pred CCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH------HhhCCCEEEEEeCC-CHHHHHHHHHhh
Confidence 3589999 9999999999999999999999 6799999999887753 12346999999997 457788898888
Q ss_pred CCcccccCchhhHHHHHhcCCC----CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhc
Q 008845 397 PWLALPFGDARKASLSRKFKVS----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 468 (551)
Q Consensus 397 ~~~~~~~~~d~~~~l~~~~~v~----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~ 468 (551)
+ +++|++.|.++.+++.|||. .+|++||||++|+|++.. ++. -...+++++++.++++..
T Consensus 76 ~-l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~-------~~v----~~~~h~~~~l~~~~~~~~ 139 (322)
T 4eo3_A 76 D-LKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEW-------RRV----KVEGHVQEVKEALDRLIE 139 (322)
T ss_dssp T-CCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEE-------ESC----CSTTHHHHHHHHHHHHHH
T ss_pred C-CceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEE-------eCC----CccccHHHHHHHHhhhch
Confidence 7 78999999999999999994 578999999999999762 111 245566777777777653
No 161
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.40 E-value=5.2e-17 Score=142.12 Aligned_cols=114 Identities=36% Similarity=0.662 Sum_probs=93.1
Q ss_pred ccCceeeccc-CCCc--EEEEEecCCCHhhHhhhHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHhhCCCCccccC
Q 008845 8 ELLLRVKLDS-LKGK--IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 83 (551)
Q Consensus 8 ~~~~~v~l~~-~~gk--vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 83 (551)
.+|+.+++++ ++|| ++|+||++||++|+.++|.|.++++++++.+ ++.+++|++|.+.+.+++|+++++..+..+.
T Consensus 12 ~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~ 91 (143)
T 2lus_A 12 KNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIP 91 (143)
Confidence 3688999999 9998 8899999999999999999999999995432 6899999999888899999998865443332
Q ss_pred C-hhhHHHHHhhcCCCCCcEEEEEcCCCeEEEcCcchhh
Q 008845 84 D-SETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEII 121 (551)
Q Consensus 84 ~-~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~ 121 (551)
. .+....+.+.|++.++|+++++|++|+++.+.+...+
T Consensus 92 ~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~ 130 (143)
T 2lus_A 92 YRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEV 130 (143)
Confidence 1 1122468899999999999999999999987555443
No 162
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.60 E-value=7.6e-15 Score=130.03 Aligned_cols=103 Identities=24% Similarity=0.388 Sum_probs=90.3
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeC--CCCHHHHHHHHhhCCCCccccCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSG--DEDDEAFKGYFSKMPWLAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~--d~~~~~~~~~~~~~~~~~~~~~~ 84 (551)
.+|+.+++++++ | ++|+||++||++|+.++|.|.++++++ ++.++.|++ +.+.+.+++|+++++..+..+.+
T Consensus 19 ~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d 93 (154)
T 3ia1_A 19 PKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLAS 93 (154)
T ss_dssp TTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCC
T ss_pred CCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccc
Confidence 478899999999 9 999999999999999999999999999 378999999 57889999999999986666655
Q ss_pred h-hhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 85 S-ETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~-~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
. +....+.+.|++.++|+++++|++|+++..
T Consensus 94 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (154)
T 3ia1_A 94 DRDRPHEVAARFKVLGQPWTFVVDREGKVVAL 125 (154)
T ss_dssp SSCCHHHHHTTSSBCSSCEEEEECTTSEEEEE
T ss_pred cccchHHHHHHhCCCcccEEEEECCCCCEEEE
Confidence 2 123579999999999999999999999874
No 163
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.60 E-value=4.1e-15 Score=136.38 Aligned_cols=105 Identities=28% Similarity=0.482 Sum_probs=89.4
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCC-HHHHHHHHhhCCCCccc-cCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDED-DEAFKGYFSKMPWLAVP-FSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~-~~~~~~~~~~~~~~~~~-~~~ 84 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.+++++++.. ++.+++|++|.+ .+.+++|+++++...++ +.+
T Consensus 48 ~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d 126 (186)
T 1jfu_A 48 ADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP-NFEVVAINIDTRDPEKPKTFLKEANLTRLGYFND 126 (186)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT-TEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEEC
T ss_pred CCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC-CcEEEEEECCCCCHHHHHHHHHHcCCCCCceEEC
Confidence 47889999999999 999999999999999999999999999865 599999999964 56789999998874333 444
Q ss_pred hhhHHHHHhhcCCC----CCcEEEEEcCCCeEEEc
Q 008845 85 SETRDKLDELFKVM----GIPHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~~~~~~l~~~~~v~----~~P~~~lid~~G~i~~~ 115 (551)
.. ..+.+.|++. ++|+++++|++|+++..
T Consensus 127 ~~--~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 127 QK--AKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp TT--CHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred Cc--chHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 43 4577888885 89999999999999875
No 164
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.60 E-value=2.8e-15 Score=137.72 Aligned_cols=104 Identities=10% Similarity=0.185 Sum_probs=91.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHhhCCCCc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFSKMPWLA 79 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~~~~~~~ 79 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++.+. +.++.|+++ .+.+.+++|+++++..+
T Consensus 21 ~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~ 98 (188)
T 2cvb_A 21 PRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK--VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFF 98 (188)
T ss_dssp TTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT--EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCS
T ss_pred CCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC--eEEEEEEcCccccccccCHHHHHHHHHHhCCCc
Confidence 47889999999999 999999999999999999999999999864 999999996 46788999999988765
Q ss_pred cccCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
..+.+.. ..+.+.|++.++|+++|+|++|+++..
T Consensus 99 ~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 99 PYLLDET--QEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp CEEECSS--SHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred eEEECCc--chHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 5555544 368899999999999999999999986
No 165
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.60 E-value=1e-15 Score=136.35 Aligned_cols=104 Identities=22% Similarity=0.264 Sum_probs=84.8
Q ss_pred ccCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (551)
.+|+.++|++++|| ++|+|| ++||++|+.++|.|++++++++..+ +.+++|+.| +.+..++|.+++++.+..+.|.
T Consensus 18 ~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~-~~~v~vs~d-~~~~~~~~~~~~~~~~p~l~D~ 95 (157)
T 4g2e_A 18 TELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVN-AVVLGISVD-PPFSNKAFKEHNKLNFTILSDY 95 (157)
T ss_dssp TTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCS-SEEEEEESS-CHHHHHHHHHHTTCCSEEEECT
T ss_pred CCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccC-ceEeeeccc-chhHHHHHHHHcCCcEEEEEcC
Confidence 57899999999999 999999 9999999999999999999998774 899999987 6778899999998877666665
Q ss_pred hhHHHHHhhcCCC-----------CCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 115 (551)
+ ..+.+.||+. ..|+++|||++|+|+..
T Consensus 96 ~--~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~ 134 (157)
T 4g2e_A 96 N--REVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK 134 (157)
T ss_dssp T--SHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE
T ss_pred C--cHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE
Confidence 5 4688999874 46899999999999875
No 166
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.60 E-value=3.4e-15 Score=132.07 Aligned_cols=105 Identities=19% Similarity=0.296 Sum_probs=91.1
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-CCHHHHHHHHhhCCCCccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-EDDEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-~~~~~~~~~~~~~~~~~~~~~~~ 85 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.+++++++.. ++.++.|+.+ .+.+.+++|+++++..+....+.
T Consensus 16 ~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~ 94 (153)
T 2l5o_A 16 LHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK-NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDA 94 (153)
T ss_dssp TTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCc
Confidence 46889999999999 999999999999999999999999999876 4999999976 46788999999998776555554
Q ss_pred hhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
. ..+.+.|++.++|+++++|++|+++..
T Consensus 95 ~--~~~~~~~~i~~~P~~~lid~~G~i~~~ 122 (153)
T 2l5o_A 95 D--KAVGQAFGTQVYPTSVLIGKKGEILKT 122 (153)
T ss_dssp S--CHHHHHHTCCSSSEEEEECSSSCCCEE
T ss_pred h--HHHHHHcCCCccCeEEEECCCCcEEEE
Confidence 3 368899999999999999999998763
No 167
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.59 E-value=3.8e-15 Score=149.45 Aligned_cols=105 Identities=20% Similarity=0.136 Sum_probs=92.7
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-----CCHHHHHHHHhhCCCCccc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-----EDDEAFKGYFSKMPWLAVP 81 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-----~~~~~~~~~~~~~~~~~~~ 81 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|.++++++++. ++.|+.|+++ .+.+.+++|++++++.+..
T Consensus 70 ~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~-~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv 148 (352)
T 2hyx_A 70 PGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS-GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPI 148 (352)
T ss_dssp GGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCE
T ss_pred CCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC-CeEEEEEECCcccccCCHHHHHHHHHHcCCCccE
Confidence 46789999999999 999999999999999999999999999876 4999999986 4688999999998877665
Q ss_pred cCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 82 FSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 82 ~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+.+.. ..+.+.|++.++|+++|||++|+++..
T Consensus 149 ~~D~~--~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 149 ALDNN--YATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp EECTT--SHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred EeCCc--HHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 55544 468899999999999999999999975
No 168
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.59 E-value=3.9e-15 Score=129.98 Aligned_cols=83 Identities=22% Similarity=0.435 Sum_probs=75.7
Q ss_pred cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCc
Q 008845 326 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 405 (551)
Q Consensus 326 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 405 (551)
+.+|....++.++|+++||+||++||++|+.+.|.|.++++.++++ +.++.|++|..+
T Consensus 38 ~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~------------------- 95 (141)
T 3hxs_A 38 DYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK---IYIYKVNVDKEP------------------- 95 (141)
T ss_dssp CCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-------------------
T ss_pred ccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc---eEEEEEECCCCH-------------------
Confidence 7788889999999999999999999999999999999999998764 899999988765
Q ss_pred hhhHHHHHhcCCCCcceEEEECCCCcEEE
Q 008845 406 ARKASLSRKFKVSGIPMLVAIGPSGRTIT 434 (551)
Q Consensus 406 d~~~~l~~~~~v~~~P~~~lid~~G~i~~ 434 (551)
.+++.|+|.++|++++++++|+++.
T Consensus 96 ----~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 96 ----ELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp ----HHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred ----HHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 5899999999999999999999873
No 169
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.59 E-value=4.9e-15 Score=133.44 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=83.1
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC-------CHHHHHHH-HhhCCCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DDEAFKGY-FSKMPWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~-------~~~~~~~~-~~~~~~~ 78 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++++. ++.+++|++|. +.+.+++| .++++..
T Consensus 19 ~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 97 (169)
T 2v1m_A 19 INGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK-GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQ 97 (169)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCC
T ss_pred CCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC-CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCC
Confidence 47889999999999 999999999999999999999999999876 49999999873 56788999 4777655
Q ss_pred ccccC--ChhhH--HHHHh-----hcC-----CCCCcEEEEEcCCCeEEEc
Q 008845 79 AVPFS--DSETR--DKLDE-----LFK-----VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~--~~~~~--~~l~~-----~~~-----v~~~P~~~lid~~G~i~~~ 115 (551)
+..+. +.... ..+.+ .++ +..+|+++|||++|+++.+
T Consensus 98 ~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 98 FDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp SEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred CceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 44332 22110 11111 125 5567999999999999985
No 170
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.59 E-value=3.4e-15 Score=138.08 Aligned_cols=105 Identities=13% Similarity=0.207 Sum_probs=92.1
Q ss_pred ccCceeecccCCCc--EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHhhCCCC
Q 008845 8 ELLLRVKLDSLKGK--IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFSKMPWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk--vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~~~~~~ 78 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++.+. ++.++.|++| .+.+.+++|+++++..
T Consensus 33 ~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~ 111 (196)
T 2ywi_A 33 IDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGYP 111 (196)
T ss_dssp TTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCC
T ss_pred CCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCCC
Confidence 46889999999997 899999999999999999999999999876 4999999997 5788999999998876
Q ss_pred ccccCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 79 AVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+..+.+.. ..+.+.|++.++|+++|+|++|+++.+
T Consensus 112 ~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 112 FPYLYDET--QEVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp SCEEECSS--CHHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred ceEEECCc--hHHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 55555544 368899999999999999999999975
No 171
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.59 E-value=5.3e-16 Score=142.57 Aligned_cols=107 Identities=18% Similarity=0.221 Sum_probs=84.5
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHhhC-CCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFSKM-PWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~~~-~~~ 78 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++++. ++.|++|++| .+.+.+++|+++. +..
T Consensus 34 ~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~ 112 (187)
T 3dwv_A 34 ADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAE 112 (187)
T ss_dssp TTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCS
T ss_pred CCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCC
Confidence 47889999999999 999999999999999999999999999987 4999999998 4577889998854 554
Q ss_pred ccccC--Chhh--HHHHH--------hhcCCCCCc---EEEEEcCCCeEEEc
Q 008845 79 AVPFS--DSET--RDKLD--------ELFKVMGIP---HLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~--~~~~--~~~l~--------~~~~v~~~P---~~~lid~~G~i~~~ 115 (551)
+..+. +... ...+. ..+++..+| +++|||++|+++..
T Consensus 113 ~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 113 FPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp SCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred CceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 44442 1111 01121 345667788 99999999999985
No 172
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.59 E-value=3e-15 Score=133.49 Aligned_cols=102 Identities=21% Similarity=0.371 Sum_probs=88.5
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 86 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++. ++.++.|+.+. .+++++++.+..+..+.+..
T Consensus 29 ~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~---~~~~~~~~~~~~~~~~~d~~ 104 (158)
T 3hdc_A 29 LSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG-DLVVLAVNVEK---RFPEKYRRAPVSFNFLSDAT 104 (158)
T ss_dssp TTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT-SEEEEEEECSS---SCCGGGGGCCCSCEEEECTT
T ss_pred CCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC-CeEEEEEeCCH---HHHHHHHHcCCCceEEECch
Confidence 46889999999999 999999999999999999999999999865 59999999886 45677777777665555554
Q ss_pred hHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 87 TRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 87 ~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
..+.+.|++.++|+++++|++|+++.+
T Consensus 105 --~~~~~~~~v~~~P~~~lid~~G~i~~~ 131 (158)
T 3hdc_A 105 --GQVQQRYGANRLPDTFIVDRKGIIRQR 131 (158)
T ss_dssp --SHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred --HHHHHHhCCCCcceEEEEcCCCCEEEE
Confidence 468999999999999999999999875
No 173
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.58 E-value=5.6e-15 Score=156.02 Aligned_cols=72 Identities=22% Similarity=0.458 Sum_probs=60.8
Q ss_pred Cc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCC-CCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 20 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQ-GDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 20 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
++ ++|+|||+||++|+.++|.|.+++++++.. ..+.++.|+++.+.. ..+++.|+|
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~----------------------~~l~~~~~V 87 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN----------------------SAVCREFNI 87 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG----------------------HHHHHHTTC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc----------------------HHHHHHcCC
Confidence 57 999999999999999999999999999862 258999999875333 469999999
Q ss_pred CCCcEEEEEcC---CCeEE
Q 008845 98 MGIPHLVILDE---NGKVL 113 (551)
Q Consensus 98 ~~~P~~~lid~---~G~i~ 113 (551)
.++|+++++++ +|+.+
T Consensus 88 ~~~PTl~~f~~g~~~G~~~ 106 (519)
T 3t58_A 88 AGFPTVRFFQAFTKNGSGA 106 (519)
T ss_dssp CSBSEEEEECTTCCSCCCE
T ss_pred cccCEEEEEcCcccCCCce
Confidence 99999999975 55433
No 174
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.58 E-value=8.8e-15 Score=135.33 Aligned_cols=101 Identities=18% Similarity=0.180 Sum_probs=88.3
Q ss_pred ceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC----CCCccccCC
Q 008845 11 LRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM----PWLAVPFSD 84 (551)
Q Consensus 11 ~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~----~~~~~~~~~ 84 (551)
+.+++++++|| +||+|| ++||++|+.++|.|.++++++++. ++.|++|++|. .+..++|.+++ ++.+..+.+
T Consensus 36 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~-~~~~~~~~~~~~~~~~~~~~~~~d 113 (195)
T 2bmx_A 36 TTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR-DAQILGVSIDS-EFAHFQWRAQHNDLKTLPFPMLSD 113 (195)
T ss_dssp EEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT-TEEEEEEESSC-HHHHHHHHHHCTTGGGCCSCEEEC
T ss_pred cEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEECCC-HHHHHHHHHHhccccCCceeEEeC
Confidence 79999999999 999999 999999999999999999999876 49999999985 67889999887 554444555
Q ss_pred hhhHHHHHhhcCCC-----CCcEEEEEcCCCeEEEc
Q 008845 85 SETRDKLDELFKVM-----GIPHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~~~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~ 115 (551)
.. ..+.+.|++. ++|+++|+|++|+++..
T Consensus 114 ~~--~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 147 (195)
T 2bmx_A 114 IK--RELSQAAGVLNADGVADRVTFIVDPNNEIQFV 147 (195)
T ss_dssp TT--SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEE
T ss_pred Cc--hHHHHHhCCcccCCCccceEEEEcCCCeEEEE
Confidence 33 4688999999 99999999999999985
No 175
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.58 E-value=4.1e-15 Score=132.00 Aligned_cols=100 Identities=18% Similarity=0.375 Sum_probs=86.5
Q ss_pred CceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccc-cCChhh
Q 008845 10 LLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVP-FSDSET 87 (551)
Q Consensus 10 ~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~-~~~~~~ 87 (551)
++.+++++++|| ++|+||++||++|+.++|.|.+++++ +++.++.|+++.+.+.+++|++++++.+.. ..+..
T Consensus 32 ~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~- 106 (156)
T 1kng_A 32 VPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDAN- 106 (156)
T ss_dssp CCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT-
T ss_pred CceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCch-
Confidence 388999999999 99999999999999999999998865 358999999999999999999998866552 22322
Q ss_pred HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 88 RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 88 ~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
..+.+.|++.++|+++++|++|+++..
T Consensus 107 -~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 107 -GRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp -SHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred -hHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 468899999999999999999999874
No 176
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.58 E-value=1.4e-14 Score=131.92 Aligned_cols=104 Identities=14% Similarity=0.125 Sum_probs=90.8
Q ss_pred ccCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (551)
.+|+.+++++++|| +||+|| ++||++|+.++|.|+++++++++.+ +.|++|+.| +.+..++|+++++..+..+.|.
T Consensus 39 ~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~-~~vv~Vs~D-~~~~~~~~~~~~~~~f~~l~D~ 116 (179)
T 3ixr_A 39 SGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQIN-ATVLGVSRD-SVKSHDSFCAKQGFTFPLVSDS 116 (179)
T ss_dssp GGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTT-EEEEEEESC-CHHHHHHHHHHHTCCSCEEECT
T ss_pred CCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC-CEEEEEcCC-CHHHHHHHHHHcCCceEEEECC
Confidence 47889999999999 999998 9999999999999999999998874 999999998 5778899999888776666665
Q ss_pred hhHHHHHhhcCCCC------------CcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVMG------------IPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~~------------~P~~~lid~~G~i~~~ 115 (551)
. ..+.+.|++.. .|+++|||++|+|+..
T Consensus 117 ~--~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~ 156 (179)
T 3ixr_A 117 D--AILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEA 156 (179)
T ss_dssp T--CHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEE
T ss_pred c--hHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEE
Confidence 4 36889999863 6999999999999975
No 177
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.58 E-value=8.8e-15 Score=130.62 Aligned_cols=106 Identities=19% Similarity=0.232 Sum_probs=91.5
Q ss_pred ccCceeecccCCCc--EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCC
Q 008845 8 ELLLRVKLDSLKGK--IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk--vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (551)
.+|+.+++++++|| ++|+|| ++||++|+.++|.|.++++++++. ++.+++|++| +.+.+++|++++++.+..+.+
T Consensus 23 ~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~is~d-~~~~~~~~~~~~~~~~~~~~d 100 (160)
T 1xvw_A 23 QNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND-DSAALAISVG-PPPTHKIWATQSGFTFPLLSD 100 (160)
T ss_dssp TTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS-SEEEEEEESC-CHHHHHHHHHHHTCCSCEEEC
T ss_pred CCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CcEEEEEeCC-CHHHHHHHHHhcCCCceEEec
Confidence 46889999999997 899998 999999999999999999999866 5999999998 677899999998886665666
Q ss_pred hhhHHHHHhhcCCC----CCc--EEEEEcCCCeEEEc
Q 008845 85 SETRDKLDELFKVM----GIP--HLVILDENGKVLSD 115 (551)
Q Consensus 85 ~~~~~~l~~~~~v~----~~P--~~~lid~~G~i~~~ 115 (551)
......+.+.|++. ++| +++++|++|+++..
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~ 137 (160)
T 1xvw_A 101 FWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFA 137 (160)
T ss_dssp TTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEE
T ss_pred CCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEE
Confidence 31124688999998 999 99999999999985
No 178
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.58 E-value=1.3e-14 Score=130.79 Aligned_cols=107 Identities=17% Similarity=0.261 Sum_probs=84.5
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHh-hCCCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFS-KMPWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~-~~~~~ 78 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++++. ++.|++|++| .+.+.+++|++ +++..
T Consensus 20 ~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
T 2p5q_A 20 AKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSE 98 (170)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCC
T ss_pred CCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 57889999999999 999999999999999999999999999876 4999999997 36788999998 66654
Q ss_pred cccc--CChhhH--HHHH-----hhcCC--CCCc---EEEEEcCCCeEEEc
Q 008845 79 AVPF--SDSETR--DKLD-----ELFKV--MGIP---HLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~--~~~~~~--~~l~-----~~~~v--~~~P---~~~lid~~G~i~~~ 115 (551)
+..+ .+.... ..+. ..+++ .++| ++++||++|+++.+
T Consensus 99 ~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 99 FPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp SCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred ceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 4433 222110 1122 12466 7788 99999999999985
No 179
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.58 E-value=6.1e-15 Score=126.07 Aligned_cols=106 Identities=15% Similarity=0.257 Sum_probs=79.3
Q ss_pred CCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchh
Q 008845 328 NGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDAR 407 (551)
Q Consensus 328 ~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~ 407 (551)
+|........+||+++|+||++||++|+.+.|.|.+++++++. ++.++.|++|.+.
T Consensus 15 ~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~d~--------------------- 70 (126)
T 2l57_A 15 NVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG---KFNIYYARLEEEK--------------------- 70 (126)
T ss_dssp SEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS---SCEEEEEETTSSH---------------------
T ss_pred chhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCc---------------------
Confidence 3333334555689999999999999999999999999998863 4899999944222
Q ss_pred hHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 408 KASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 408 ~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
...+++.|+|.++|++++++++|+++.+.. | .... ++|.+.|++++...+
T Consensus 71 ~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~-------G----~~~~---~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 71 NIDLAYKYDANIVPTTVFLDKEGNKFYVHQ-------G----LMRK---NNIETILNSLGVKEG 120 (126)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTCCEEEEEE-------S----CCCH---HHHHHHHHHHCCCCC
T ss_pred hHHHHHHcCCcceeEEEEECCCCCEEEEec-------C----CCCH---HHHHHHHHHHhcccc
Confidence 236899999999999999999999988632 2 1222 456667776665443
No 180
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.58 E-value=3.1e-15 Score=137.76 Aligned_cols=107 Identities=18% Similarity=0.218 Sum_probs=86.0
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC-------CHHHHHHHH-hhCCCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DDEAFKGYF-SKMPWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~-------~~~~~~~~~-~~~~~~ 78 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++++. ++.|++|++|. +.+.+++|+ ++++..
T Consensus 36 ~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 114 (190)
T 2vup_A 36 ADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAE 114 (190)
T ss_dssp TTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCC
T ss_pred CCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCC
Confidence 46889999999999 999999999999999999999999999876 49999999983 678899999 777655
Q ss_pred ccccC--ChhhH--HHHH-----hhcCCCCCc------EEEEEcCCCeEEEc
Q 008845 79 AVPFS--DSETR--DKLD-----ELFKVMGIP------HLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~--~~~~~--~~l~-----~~~~v~~~P------~~~lid~~G~i~~~ 115 (551)
+..+. +.... ..+. ..|++.++| +++|||++|+++.+
T Consensus 115 ~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 115 FPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp SCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred eEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 44443 21110 1121 346888999 99999999999975
No 181
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.57 E-value=8.9e-15 Score=137.72 Aligned_cols=103 Identities=18% Similarity=0.203 Sum_probs=87.8
Q ss_pred cC--ceeecccC-CCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------C
Q 008845 9 LL--LRVKLDSL-KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------P 76 (551)
Q Consensus 9 ~~--~~v~l~~~-~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~ 76 (551)
+| +.++++++ +|| +||+|| ++||++|+.++|.|+++++++++. ++.|++|++| +.+..++|+++. +
T Consensus 42 ~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~-~v~vv~Is~D-~~~~~~~~~~~~~~~~g~~~ 119 (221)
T 2c0d_A 42 NNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK-NVELLGISVD-SVYSHLAWKNMPIEKGGIGN 119 (221)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT-TEEEEEEESS-CHHHHHHHHHSCGGGTCCCS
T ss_pred CCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEeCC-CHHHHHHHHHHhhhhcCccC
Confidence 67 89999999 999 999999 999999999999999999999876 4999999997 566788898877 4
Q ss_pred CCccccCChhhHHHHHhhcCC-----CCCcEEEEEcCCCeEEEc
Q 008845 77 WLAVPFSDSETRDKLDELFKV-----MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 77 ~~~~~~~~~~~~~~l~~~~~v-----~~~P~~~lid~~G~i~~~ 115 (551)
+.+..+.|.. ..+.+.|++ ..+|+++|||++|+|+..
T Consensus 120 ~~fp~l~D~~--~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~ 161 (221)
T 2c0d_A 120 VEFTLVSDIN--KDISKNYNVLYDNSFALRGLFIIDKNGCVRHQ 161 (221)
T ss_dssp CSSEEEECTT--SHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred CceEEEECCc--hHHHHHcCCcccCCCccceEEEECCCCeEEEE
Confidence 4444445543 468899999 478999999999999985
No 182
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.57 E-value=8.5e-15 Score=131.85 Aligned_cols=100 Identities=20% Similarity=0.293 Sum_probs=85.6
Q ss_pred cCceeecccC-CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccc-cCCh
Q 008845 9 LLLRVKLDSL-KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVP-FSDS 85 (551)
Q Consensus 9 ~~~~v~l~~~-~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~-~~~~ 85 (551)
+|+.++++++ +|| ++|+||++||++|+.++|.|.+++++ ++.++.|+++.+.+.+++|+++++..+.. +.+.
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~ 113 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDG 113 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEET
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECc
Confidence 6788888885 899 99999999999999999999999875 37899999999999999999998866543 2232
Q ss_pred hhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
. ..+.+.|++.++|+++++|++|+++..
T Consensus 114 ~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 141 (168)
T 2b1k_A 114 D--GMLGLDLGVYGAPETFLIDGNGIIRYR 141 (168)
T ss_dssp T--CHHHHHHTCCSSSEEEEECTTSBEEEE
T ss_pred c--hHHHHHcCccccCEEEEECCCCeEEEE
Confidence 2 468899999999999999999999874
No 183
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.57 E-value=9.1e-15 Score=134.11 Aligned_cols=103 Identities=18% Similarity=0.180 Sum_probs=87.9
Q ss_pred cC--ceeecccCCCc-EEEEEec-CCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC----CCCcc
Q 008845 9 LL--LRVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM----PWLAV 80 (551)
Q Consensus 9 ~~--~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~----~~~~~ 80 (551)
+| +.+++++++|| +||+||+ +||++|+.++|.|+++++++++. ++.|++|+.| +.+..++|.+++ ++.+.
T Consensus 17 ~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~-~v~vv~Is~d-~~~~~~~~~~~~~~~~~~~fp 94 (186)
T 1n8j_A 17 NGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL-GVDVYSVSTD-THFTHKAWHSSSETIAKIKYA 94 (186)
T ss_dssp TTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT-TEEEEEEESS-CHHHHHHHHHHCTTGGGCCSE
T ss_pred CCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC-CCEEEEEECC-CHHHHHHHHHHcCcccCCcee
Confidence 47 89999999999 9999995 99999999999999999999876 4999999998 567788999888 55444
Q ss_pred ccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 81 PFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
.+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 95 ~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~ 133 (186)
T 1n8j_A 95 MIGDPT--GALTRNFDNMREDEGLADRATFVVDPQGIIQAI 133 (186)
T ss_dssp EEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred EEECCc--hHHHHHhCCccCCCCceeeEEEEECCCCeEEEE
Confidence 455543 4688999997 37999999999999985
No 184
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.57 E-value=1e-14 Score=136.47 Aligned_cols=103 Identities=18% Similarity=0.269 Sum_probs=87.7
Q ss_pred cCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------CCCc
Q 008845 9 LLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------PWLA 79 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~~~~ 79 (551)
.|+.+++++++|| +||+|| ++||++|+.++|.|+++++++++. ++.|++|++| +.+..++|+++. +..+
T Consensus 37 ~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~-~v~vv~Is~D-~~~~~~~~~~~~~~~~g~~~~~f 114 (211)
T 2pn8_A 37 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVD-SQFTHLAWINTPRRQGGLGPIRI 114 (211)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESS-CHHHHHHHHTSCGGGTCCCSCSS
T ss_pred CCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECC-CHHHHHHHHHHhhhccCccCCce
Confidence 4579999999999 999999 999999999999999999999876 4999999997 566788898877 4444
Q ss_pred cccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
..+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 115 p~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~ 154 (211)
T 2pn8_A 115 PLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 154 (211)
T ss_dssp CEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred EEEECCc--hHHHHHcCCcccCCCcccceEEEECCCCEEEEE
Confidence 4445543 4688999995 69999999999999985
No 185
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.57 E-value=7.4e-15 Score=134.65 Aligned_cols=107 Identities=16% Similarity=0.085 Sum_probs=83.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC-------CHHHHHHHHhhCCCCc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DDEAFKGYFSKMPWLA 79 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~-------~~~~~~~~~~~~~~~~ 79 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++++. ++.|++|++|. +.+.+++|+++++..+
T Consensus 37 ~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~ 115 (185)
T 2gs3_A 37 IDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKF 115 (185)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCS
T ss_pred CCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC-CeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCC
Confidence 46889999999999 999999999999999999999999999876 49999999873 5678899999888664
Q ss_pred cccCC--hhh--HHHHHhhc-------C-----CCCCcEEEEEcCCCeEEEc
Q 008845 80 VPFSD--SET--RDKLDELF-------K-----VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~--~~~--~~~l~~~~-------~-----v~~~P~~~lid~~G~i~~~ 115 (551)
..+.+ ... ...+...+ + +..+|++++||++|+++.+
T Consensus 116 p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 116 DMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 167 (185)
T ss_dssp EEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEE
T ss_pred eeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEe
Confidence 44431 111 11122221 4 3447999999999999985
No 186
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.57 E-value=1.5e-14 Score=119.28 Aligned_cols=73 Identities=29% Similarity=0.605 Sum_probs=63.4
Q ss_pred cccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 15 LDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 15 l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
+++..++ ++|+|||+||+||+.+.|.+.++++.++ ++.++.|++|... .+++
T Consensus 15 l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~------------------------~l~~ 67 (105)
T 3zzx_A 15 LNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECE------------------------DIAQ 67 (105)
T ss_dssp HHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCH------------------------HHHH
T ss_pred HHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCH------------------------HHHH
Confidence 4455678 9999999999999999999999998886 5788888888664 4999
Q ss_pred hcCCCCCcEEEEEcCCCeEEEc
Q 008845 94 LFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 94 ~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.|+|+++||++++ ++|+++.+
T Consensus 68 ~~~V~~~PT~~~~-~~G~~v~~ 88 (105)
T 3zzx_A 68 DNQIACMPTFLFM-KNGQKLDS 88 (105)
T ss_dssp HTTCCBSSEEEEE-ETTEEEEE
T ss_pred HcCCCeecEEEEE-ECCEEEEE
Confidence 9999999999998 79998874
No 187
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.57 E-value=2e-14 Score=135.73 Aligned_cols=103 Identities=17% Similarity=0.259 Sum_probs=87.2
Q ss_pred cCceeecccCCCc-EEEEEec-CCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------CCCc
Q 008845 9 LLLRVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------PWLA 79 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~~~~ 79 (551)
.|+.+++++++|| +||+||+ +||++|+.++|.|+++++++++.+ +.|++|++|. .+...+|.+.. +..+
T Consensus 58 ~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~-v~vv~Is~D~-~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
T 3ztl_A 58 EFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN-CQVIACSTDS-QYSHLAWDNLDRKSGGLGHMKI 135 (222)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTT-EEEEEEESSC-HHHHHHHHHSCGGGTSCCSCSS
T ss_pred CCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC-CEEEEEECCC-HHHHHHHHHHhhhhccccccce
Confidence 3489999999999 9999996 999999999999999999998764 9999999984 56677777765 4444
Q ss_pred cccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
..+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 136 ~~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~ 175 (222)
T 3ztl_A 136 PLLADRK--QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQI 175 (222)
T ss_dssp CEEECSS--SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEE
T ss_pred eEEeCCc--hHHHHHcCCeecCCCCccceEEEECCCCeEEEE
Confidence 4455544 4688999998 89999999999999985
No 188
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.57 E-value=1.8e-14 Score=134.05 Aligned_cols=103 Identities=20% Similarity=0.197 Sum_probs=88.6
Q ss_pred cC--ceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------CC
Q 008845 9 LL--LRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------PW 77 (551)
Q Consensus 9 ~~--~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~~ 77 (551)
+| +.+++++++|| +||+|| ++||++|+.++|.|+++++++++. ++.|++|++| +.+..++|+++. +.
T Consensus 23 ~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~-~v~vi~Is~D-~~~~~~~~~~~~~~~~~~~~~ 100 (202)
T 1uul_A 23 NGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI-GCEVLACSMD-SEYSHLAWTSIERKRGGLGQM 100 (202)
T ss_dssp TSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESS-CHHHHHHHHHSCGGGTCCCSC
T ss_pred CCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEEEeCC-CHHHHHHHHHHHHhhCCCCCC
Confidence 56 79999999999 999999 999999999999999999999876 4999999998 567788898876 44
Q ss_pred CccccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 78 LAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 78 ~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
.+..+.|.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 101 ~~p~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~ 142 (202)
T 1uul_A 101 NIPILADKT--KCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI 142 (202)
T ss_dssp SSCEEECTT--CHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred ceeEEECCc--hHHHHHcCCccCCCCceeeEEEEECCCCEEEEE
Confidence 444444543 4688999999 99999999999999985
No 189
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.56 E-value=1.3e-14 Score=133.28 Aligned_cols=100 Identities=23% Similarity=0.271 Sum_probs=87.4
Q ss_pred eeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC----CCCccccCCh
Q 008845 12 RVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM----PWLAVPFSDS 85 (551)
Q Consensus 12 ~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~----~~~~~~~~~~ 85 (551)
.+++++++|| +||+|| ++||++|+.++|.|+++++++++. ++.+++|++|. .+..++|.+++ ++.+..+.+.
T Consensus 23 ~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~-~~~~~~~~~~~~~~~~~~~~~~~d~ 100 (187)
T 1we0_A 23 EVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL-GVEVYSVSTDT-HFVHKAWHENSPAVGSIEYIMIGDP 100 (187)
T ss_dssp EEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT-TEEEEEEESSC-HHHHHHHHHSCHHHHTCCSEEEECT
T ss_pred EecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc-CCEEEEEECCC-HHHHHHHHHHhccccCCCceEEECC
Confidence 9999999999 999999 999999999999999999999876 49999999985 67788898887 5555545554
Q ss_pred hhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
. ..+.+.|++. ++|+++++|++|+++..
T Consensus 101 ~--~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~ 134 (187)
T 1we0_A 101 S--QTISRQFDVLNEETGLADRGTFIIDPDGVIQAI 134 (187)
T ss_dssp T--CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred c--hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEE
Confidence 3 4688999999 99999999999999985
No 190
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.56 E-value=1.4e-14 Score=134.36 Aligned_cols=103 Identities=16% Similarity=0.156 Sum_probs=88.9
Q ss_pred cCc---eeecccC-CCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhh-------C
Q 008845 9 LLL---RVKLDSL-KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSK-------M 75 (551)
Q Consensus 9 ~~~---~v~l~~~-~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~-------~ 75 (551)
+|+ .++++++ +|| ++|+|| ++||++|+.++|.|.++++++++. ++.|++|++|. .+..++|.++ +
T Consensus 18 ~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~-~~~~~~~~~~~~~~~~~~ 95 (198)
T 1zof_A 18 NNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK-GFNVIGVSIDS-EQVHFAWKNTPVEKGGIG 95 (198)
T ss_dssp TSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT-TEEEEEEESSC-HHHHHHHHTSCGGGTCCC
T ss_pred CCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEECCC-HHHHHHHHHhhhhccccc
Confidence 677 9999999 999 999999 999999999999999999999876 49999999984 6788889887 5
Q ss_pred CCCccccCChhhHHHHHhhcCCC-----CCcEEEEEcCCCeEEEc
Q 008845 76 PWLAVPFSDSETRDKLDELFKVM-----GIPHLVILDENGKVLSD 115 (551)
Q Consensus 76 ~~~~~~~~~~~~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~ 115 (551)
++.+..+.+.. ..+.+.|++. ++|+++++|++|+++..
T Consensus 96 ~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 138 (198)
T 1zof_A 96 QVSFPMVADIT--KSISRDYDVLFEEAIALRGAFLIDKNMKVRHA 138 (198)
T ss_dssp CCSSCEEECTT--SHHHHHTTCEETTTEECEEEEEEETTTEEEEE
T ss_pred CceeEEEECCc--hHHHHHhCCcccCCcccceEEEECCCCEEEEE
Confidence 55544444543 4688999999 99999999999999985
No 191
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.56 E-value=2.1e-14 Score=133.03 Aligned_cols=103 Identities=21% Similarity=0.227 Sum_probs=87.6
Q ss_pred cC--ceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------CC
Q 008845 9 LL--LRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------PW 77 (551)
Q Consensus 9 ~~--~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~~ 77 (551)
+| +.+++++++|| +||+|| ++||++|+.++|.|.++++++++. ++.|++|++|. .+...+|++++ ++
T Consensus 21 ~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~-~~~~~~~~~~~~~~~~~~~~ 98 (197)
T 1qmv_A 21 DGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL-GCEVLGVSVDS-QFTHLAWINTPRKEGGLGPL 98 (197)
T ss_dssp TTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSC-HHHHHHHHTSCGGGTCCCSC
T ss_pred CCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCC-HHHHHHHHHHHHhhCCCCCC
Confidence 56 89999999999 999999 999999999999999999999876 49999999984 56778888776 44
Q ss_pred CccccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 78 LAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 78 ~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
.+..+.|.. ..+.+.|++. ++|+++++|++|+|+..
T Consensus 99 ~~p~l~D~~--~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 99 NIPLLADVT--RRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp SSCEEECTT--CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred ceEEEECCc--HHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 444444543 4688999998 89999999999999985
No 192
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.56 E-value=4.4e-14 Score=131.47 Aligned_cols=106 Identities=11% Similarity=0.020 Sum_probs=80.1
Q ss_pred cc-CceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHh-----
Q 008845 8 EL-LLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFS----- 73 (551)
Q Consensus 8 ~~-~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~----- 73 (551)
.+ |+.++|++++|| |||+|||+||++| .++|.|+++++++++.+ +.|++|+++ .+.+.+++|++
T Consensus 25 ~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g-~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~ 102 (207)
T 2r37_A 25 IDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFG-LVILGFPCNQFGKQEPGENSEILPTLKYVRPG 102 (207)
T ss_dssp TTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGT-EEEEEEECCCBTTCCCSCHHHHHHHHHHTSSC
T ss_pred CCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCC-EEEEEEECcccCcCCCCCHHHHHHHHHhcchh
Confidence 35 899999999999 9999999999999 79999999999998775 999999975 24678899998
Q ss_pred -hCCCCccccCChh--h------HHHHHhhc-------C--------------CCCCcEEEEEcCCCeEEEc
Q 008845 74 -KMPWLAVPFSDSE--T------RDKLDELF-------K--------------VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 74 -~~~~~~~~~~~~~--~------~~~l~~~~-------~--------------v~~~P~~~lid~~G~i~~~ 115 (551)
+++..+..+.+.+ . ...+.... + +...|+++|||++|+|+.+
T Consensus 103 ~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~ 174 (207)
T 2r37_A 103 GGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMR 174 (207)
T ss_dssp TTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred hccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEE
Confidence 7776544443211 0 01122211 1 2334899999999999875
No 193
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.56 E-value=1.8e-14 Score=135.08 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=89.2
Q ss_pred cC--ceeecccC-CCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------C
Q 008845 9 LL--LRVKLDSL-KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------P 76 (551)
Q Consensus 9 ~~--~~v~l~~~-~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~ 76 (551)
+| +.++++++ +|| +||+|| ++||++|+.++|.|+++++++++. ++.|++|++| +.+..++|+++. +
T Consensus 38 ~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D-~~~~~~~~~~~~~~~~g~~~ 115 (213)
T 2i81_A 38 DNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER-NVELLGCSVD-SKYTHLAWKKTPLAKGGIGN 115 (213)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT-TEEEEEEESS-CHHHHHHHHSSCGGGTCCCS
T ss_pred CCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCC-CHHHHHHHHHHHHhhCCccC
Confidence 57 89999999 999 999999 999999999999999999999866 4999999998 677888998877 4
Q ss_pred CCccccCChhhHHHHHhhcCCC-----CCcEEEEEcCCCeEEEc
Q 008845 77 WLAVPFSDSETRDKLDELFKVM-----GIPHLVILDENGKVLSD 115 (551)
Q Consensus 77 ~~~~~~~~~~~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~ 115 (551)
..+..+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 116 ~~fp~l~D~~--~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~ 157 (213)
T 2i81_A 116 IKHTLLSDIT--KSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL 157 (213)
T ss_dssp CSSEEEECTT--SHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred CCceEEECCc--hHHHHHhCCccccCCcccEEEEECCCCEEEEE
Confidence 4444445533 4699999999 89999999999999986
No 194
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.56 E-value=2.6e-15 Score=137.16 Aligned_cols=106 Identities=15% Similarity=0.164 Sum_probs=84.3
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC-------CHHHHHHHHhh-CCCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DDEAFKGYFSK-MPWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~-------~~~~~~~~~~~-~~~~ 78 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++++. ++.|++|++|. +.+.+++|+++ ++..
T Consensus 37 ~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~ 115 (181)
T 2p31_A 37 IRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH-HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVS 115 (181)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCC
T ss_pred CCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC-CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCC
Confidence 46889999999999 999999999999999999999999999876 49999999874 67889999988 6655
Q ss_pred ccccC--Chhh--HHHHHhhcCCCCCc-------EEEEEcCCCeEEEc
Q 008845 79 AVPFS--DSET--RDKLDELFKVMGIP-------HLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~--~~~~--~~~l~~~~~v~~~P-------~~~lid~~G~i~~~ 115 (551)
+..+. +... ...+ -.|.+.++| +++|||++|+++.+
T Consensus 116 ~p~~~~~d~~g~~~~~~-~~~~~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 116 FPMFSKIAVTGTGAHPA-FKYLAQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp SCBBCCCCCSSTTSCHH-HHHHHHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred ceeEeecccCCccchhh-hhhhhhcCCCccccceeEEEEcCCCCEEEE
Confidence 44442 2111 0111 124466778 99999999999975
No 195
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.55 E-value=2.3e-14 Score=133.95 Aligned_cols=106 Identities=16% Similarity=0.106 Sum_probs=80.2
Q ss_pred cc-CceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHh-----
Q 008845 8 EL-LLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFS----- 73 (551)
Q Consensus 8 ~~-~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~----- 73 (551)
.+ |+.++|++++|| |||+|||+||++|+ ++|.|+++++++++.+ +.|++|+++ .+.+.+++|++
T Consensus 43 ~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g-~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~ 120 (215)
T 2i3y_A 43 LNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYG-LVVLGFPCNQFGKQEPGDNKEILPGLKYVRPG 120 (215)
T ss_dssp SSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGT-EEEEEEECCCSTTCCCSCHHHHHHHHHHTSSC
T ss_pred CCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCC-eEEEEEEccccCcCCCCCHHHHHHHHHhccch
Confidence 35 899999999999 99999999999999 9999999999998774 999999976 24678899998
Q ss_pred -hCCCCccccCChh--h------HHHHHhh-------cC--------------CCCCcEEEEEcCCCeEEEc
Q 008845 74 -KMPWLAVPFSDSE--T------RDKLDEL-------FK--------------VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 74 -~~~~~~~~~~~~~--~------~~~l~~~-------~~--------------v~~~P~~~lid~~G~i~~~ 115 (551)
+++..+..+.+.+ . ...+... ++ |...|+++|||++|+|+.+
T Consensus 121 ~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~ 192 (215)
T 2i3y_A 121 GGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMR 192 (215)
T ss_dssp TTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred hccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEE
Confidence 7766544443211 0 0112211 11 2234899999999999875
No 196
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.55 E-value=2e-14 Score=130.11 Aligned_cols=108 Identities=21% Similarity=0.293 Sum_probs=87.6
Q ss_pred ccCceeecccCCCc-EEEEEecCCCH-hhHhhhHHHHHHHHHhcCCC-CEEEEEEeCC---CCHHHHHHHHhhCCCCc--
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCG-PCQRFTPILAEVYNELSRQG-DFEVIFVSGD---EDDEAFKGYFSKMPWLA-- 79 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~-~C~~~~p~l~~~~~~~~~~~-~~~vv~v~~d---~~~~~~~~~~~~~~~~~-- 79 (551)
.+|+.+++++++|| +||+||++||+ +|+.++|.|.++++++++.+ ++.|++|++| ++.+.+++|+++++..+
T Consensus 21 ~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~ 100 (174)
T 1xzo_A 21 QDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDN 100 (174)
T ss_dssp TTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGG
T ss_pred CCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcc
Confidence 46899999999999 99999999999 99999999999999998765 5999999998 46789999999988765
Q ss_pred -cccCChhh--HHHHHh-h-----------cCCCCCcEEEEEcCCCeEEEc
Q 008845 80 -VPFSDSET--RDKLDE-L-----------FKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 -~~~~~~~~--~~~l~~-~-----------~~v~~~P~~~lid~~G~i~~~ 115 (551)
..+.+.+. ...+.. . |++..+|+++|||++|+|+..
T Consensus 101 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 101 WDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp EEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred eEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 33444222 112221 1 457889999999999999974
No 197
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.55 E-value=5.3e-15 Score=131.27 Aligned_cols=113 Identities=19% Similarity=0.311 Sum_probs=82.6
Q ss_pred CCCeeecccCCCCEEEEEEe-cCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCccccc
Q 008845 328 NGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPF 403 (551)
Q Consensus 328 ~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 403 (551)
.++.+.+++.+||+++|+|| ++||++|+.+.|.| .++.+.+..+ +.++.|+++.... +.+++
T Consensus 36 ~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~---~~~v~vd~~~~~~-----------~~~~~ 101 (154)
T 2ju5_A 36 YAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVH---LHMVEVDFPQKNH-----------QPEEQ 101 (154)
T ss_dssp HHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEECCSSCC-----------CCHHH
T ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCc---EEEEEecCccccC-----------CChhh
Confidence 45566667777999999999 99999999999999 6775555443 7888888876531 12221
Q ss_pred CchhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhc
Q 008845 404 GDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 468 (551)
Q Consensus 404 ~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~ 468 (551)
.+....+++.|+|.++|+++|+|++|+++.+. | +.+...+++.+.|+++++
T Consensus 102 -~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~--------G-----~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 102 -RQKNQELKAQYKVTGFPELVFIDAEGKQLARM--------G-----FEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp -HHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE--------C-----CCTTCHHHHHHHHHHHHT
T ss_pred -HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe--------c-----CCCCCHHHHHHHHHHHHh
Confidence 34566899999999999999999999999873 2 112233556666666654
No 198
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.55 E-value=2e-14 Score=132.62 Aligned_cols=103 Identities=17% Similarity=0.205 Sum_probs=88.8
Q ss_pred cC--ceeecccC-CCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------C
Q 008845 9 LL--LRVKLDSL-KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------P 76 (551)
Q Consensus 9 ~~--~~v~l~~~-~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~ 76 (551)
+| +.++++++ +|| +||+|| ++||++|+.++|.|+++++++++. ++.|++|++| +.+..++|.+.+ +
T Consensus 17 ~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~Is~d-~~~~~~~~~~~~~~~~~~~~ 94 (192)
T 2h01_A 17 DNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER-NVELLGCSVD-SKFTHLAWKKTPLSQGGIGN 94 (192)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT-TEEEEEEESS-CHHHHHHHHTSCGGGTCCCS
T ss_pred CCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEeC-CHHHHHHHHHhHHhhCCccC
Confidence 67 89999999 999 999999 999999999999999999999866 4999999998 577888898877 4
Q ss_pred CCccccCChhhHHHHHhhcCCC-----CCcEEEEEcCCCeEEEc
Q 008845 77 WLAVPFSDSETRDKLDELFKVM-----GIPHLVILDENGKVLSD 115 (551)
Q Consensus 77 ~~~~~~~~~~~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~ 115 (551)
+.+..+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 95 ~~~~~l~D~~--~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~ 136 (192)
T 2h01_A 95 IKHTLISDIS--KSIARSYDVLFNESVALRAFVLIDKQGVVQHL 136 (192)
T ss_dssp CSSEEEECTT--SHHHHHTTCEETTTEECCEEEEECTTSBEEEE
T ss_pred CCcCeEECCc--HHHHHHhCCcCcCCceeeEEEEEcCCCEEEEE
Confidence 4444444543 4688999999 89999999999999985
No 199
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.54 E-value=5.1e-14 Score=130.70 Aligned_cols=108 Identities=19% Similarity=0.289 Sum_probs=86.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHh-hHhhhHHHHHHHHHhcCC--CCEEEEEEeCCC---CHHHHHHHHhhCCCCcc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGP-CQRFTPILAEVYNELSRQ--GDFEVIFVSGDE---DDEAFKGYFSKMPWLAV 80 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~-C~~~~p~l~~~~~~~~~~--~~~~vv~v~~d~---~~~~~~~~~~~~~~~~~ 80 (551)
.+|+.+++++++|| +||+||++||++ |+.++|.|+++++++.+. .++.|++|++|. +.+.+++|+++++..+.
T Consensus 29 ~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~ 108 (200)
T 2b7k_A 29 MYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSIL 108 (200)
T ss_dssp TTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCE
T ss_pred CCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCce
Confidence 47899999999999 999999999997 999999999999988742 258999999984 67889999998875444
Q ss_pred ccCC-hhhHHHHHhhcCCC-CCc---------------EEEEEcCCCeEEEc
Q 008845 81 PFSD-SETRDKLDELFKVM-GIP---------------HLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~-~~~~~~l~~~~~v~-~~P---------------~~~lid~~G~i~~~ 115 (551)
.+.+ .+....+.+.|++. +.| +++|||++|+++..
T Consensus 109 ~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 109 GLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp EEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred EEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 3332 33345788899987 344 78999999999975
No 200
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.54 E-value=3.2e-14 Score=130.08 Aligned_cols=107 Identities=17% Similarity=0.107 Sum_probs=85.0
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHHHHHHhhCCCCc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAFKGYFSKMPWLA 79 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~~~~~~~ 79 (551)
.+|+.+++++++|| +||+||++||++|+.++|.|+++++++++. ++.|++|++| .+.+.+++|+++++..+
T Consensus 35 ~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~ 113 (183)
T 2obi_A 35 IDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKF 113 (183)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCS
T ss_pred CCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC-CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence 46899999999999 999999999999999999999999999876 4999999987 36788999999888665
Q ss_pred cccC--Chhh--HHHHHhhc-------C-----CCCCcEEEEEcCCCeEEEc
Q 008845 80 VPFS--DSET--RDKLDELF-------K-----VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~--~~~~--~~~l~~~~-------~-----v~~~P~~~lid~~G~i~~~ 115 (551)
..+. +... ...+.+.+ + +..+|+++|||++|+++.+
T Consensus 114 p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 114 DMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp EEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred eEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 5443 2211 11122222 4 4557999999999999985
No 201
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.54 E-value=6.9e-14 Score=126.22 Aligned_cols=108 Identities=25% Similarity=0.216 Sum_probs=89.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCH-hhHhhhHHHHHHHHHhcCCC-CEEEEEEeCC--CCHHHHHHHHhhCCCCccc-
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCG-PCQRFTPILAEVYNELSRQG-DFEVIFVSGD--EDDEAFKGYFSKMPWLAVP- 81 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~-~C~~~~p~l~~~~~~~~~~~-~~~vv~v~~d--~~~~~~~~~~~~~~~~~~~- 81 (551)
.+|+.+++++++|| ++|+||++||+ .|..++|.|+++++++...+ ++.+++|++| ++.+.+++|.++++.....
T Consensus 16 ~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w 95 (170)
T 3me7_A 16 SYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGW 95 (170)
T ss_dssp TTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSE
T ss_pred CCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCe
Confidence 57899999999999 99999999997 69999999999999997533 6999999998 4778999999998855432
Q ss_pred ---c-CChhhHHHHHhhcCC---------CCCcEEEEEcCCCeEEEc
Q 008845 82 ---F-SDSETRDKLDELFKV---------MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 82 ---~-~~~~~~~~l~~~~~v---------~~~P~~~lid~~G~i~~~ 115 (551)
+ .+.+....+++.|++ ...|+++|||++|+|+..
T Consensus 96 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 96 KVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp EEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred EEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 2 344555678888774 456899999999999974
No 202
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.54 E-value=2.7e-14 Score=134.59 Aligned_cols=103 Identities=21% Similarity=0.299 Sum_probs=88.1
Q ss_pred cCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------CCCc
Q 008845 9 LLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------PWLA 79 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~~~~ 79 (551)
.|+.+++++++|| +||+|| ++||++|+.++|.|+++++++++. ++.|++|++| +.+..++|++.. ++.+
T Consensus 45 ~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D-~~~~~~~~~~~~~~~~g~~~~~f 122 (220)
T 1zye_A 45 EFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV-NCEVVAVSVD-SHFSHLAWINTPRKNGGLGHMNI 122 (220)
T ss_dssp SEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT-TEEEEEEESS-CHHHHHHHHTSCGGGTCCCSCSS
T ss_pred CCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECC-CHHHHHHHHHHHHHhCCCcCCce
Confidence 4689999999999 999999 999999999999999999999876 4999999998 566788888776 3444
Q ss_pred cccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
..+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 123 p~l~D~~--~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~ 162 (220)
T 1zye_A 123 ALLSDLT--KQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL 162 (220)
T ss_dssp EEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred EEEECCc--HHHHHHhCCeecCCCcccceEEEECCCCEEEEE
Confidence 4444543 4689999999 99999999999999985
No 203
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.54 E-value=3.3e-14 Score=122.71 Aligned_cols=78 Identities=31% Similarity=0.497 Sum_probs=66.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHH--HHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLI--DAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~--~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
.||++||+||++||++|+.+.|.|. ++.+.++++ +.++.|+++.. +....+++.|
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~---~~~~~vd~~~~--------------------~~~~~l~~~~ 84 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH---FEVVKIDVGNF--------------------DRNLELSQAY 84 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH---CEEEEEECTTT--------------------TSSHHHHHHT
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC---EEEEEEeCCcc--------------------cchHHHHHHh
Confidence 3899999999999999999999999 998888765 89999998421 1124689999
Q ss_pred CC---CCcceEEEECCCCcEEEcccc
Q 008845 416 KV---SGIPMLVAIGPSGRTITKEAR 438 (551)
Q Consensus 416 ~v---~~~P~~~lid~~G~i~~~~~~ 438 (551)
+| .++|+++++|++|+++.+..+
T Consensus 85 ~v~~~~~~Pt~~~~d~~G~~~~~~~g 110 (133)
T 3fk8_A 85 GDPIQDGIPAVVVVNSDGKVRYTTKG 110 (133)
T ss_dssp TCGGGGCSSEEEEECTTSCEEEECCS
T ss_pred CCccCCccceEEEECCCCCEEEEecC
Confidence 99 999999999999999988654
No 204
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.54 E-value=4.1e-14 Score=121.32 Aligned_cols=84 Identities=21% Similarity=0.493 Sum_probs=72.8
Q ss_pred cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCc
Q 008845 326 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 405 (551)
Q Consensus 326 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 405 (551)
..+++.+.....+||+++|+||++||++|+++.|.|.+++++++++ +.++.|++|...
T Consensus 29 ~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---v~~~~vd~d~~~------------------- 86 (128)
T 3ul3_B 29 QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR---IYLLKVDLDKNE------------------- 86 (128)
T ss_dssp CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---EEEEEEEGGGCH-------------------
T ss_pred cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCCH-------------------
Confidence 3455566666778999999999999999999999999999999864 899999887664
Q ss_pred hhhHHHHHhcCCCCcceEEEECCCCcEEEcc
Q 008845 406 ARKASLSRKFKVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 406 d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 436 (551)
.+++.|+|+++|+++++ ++|+++.+.
T Consensus 87 ----~l~~~~~v~~~Pt~~~~-~~G~~~~~~ 112 (128)
T 3ul3_B 87 ----SLARKFSVKSLPTIILL-KNKTMLARK 112 (128)
T ss_dssp ----HHHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred ----HHHHHcCCCCcCEEEEE-ECCEEEEEe
Confidence 68999999999999999 789988864
No 205
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.30 E-value=5.8e-16 Score=138.19 Aligned_cols=106 Identities=26% Similarity=0.412 Sum_probs=90.1
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHH-HHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAE-VYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~-~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (551)
.+|+.+++++++|| ++|+||++||++|+.++|.|.+ +++++....++.++.|++|.+.+.+++|.+++++.+..+.+.
T Consensus 21 ~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~ 100 (159)
T 2ls5_A 21 TDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDP 100 (159)
Confidence 36789999999999 9999999999999999999998 988887223589999999987778899999888766656554
Q ss_pred hhHHHHHhhcC--CCCCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFK--VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~--v~~~P~~~lid~~G~i~~~ 115 (551)
. ..+.+.|+ +.++|+++++|++|+++..
T Consensus 101 ~--~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 101 G--ADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 4 46889999 5669999999999999875
No 206
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.53 E-value=5.7e-14 Score=133.90 Aligned_cols=102 Identities=20% Similarity=0.278 Sum_probs=87.3
Q ss_pred CceeecccCCCc-EEEEEec-CCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------CCCcc
Q 008845 10 LLRVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------PWLAV 80 (551)
Q Consensus 10 ~~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~~~~~ 80 (551)
|+.+++++++|| +||+||+ +||++|+.++|.|+++++++++.+ +.|++|++| +.+...+|++.. ++.+.
T Consensus 67 G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~g-v~vv~Is~D-~~~~~~~~~~~~~~~~~~~~~~fp 144 (240)
T 3qpm_A 67 FKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAIN-TEVVACSVD-SQFTHLAWIITPRKQGGLGPMKIP 144 (240)
T ss_dssp EEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTT-EEEEEEESS-CHHHHHHHHHSCGGGTCCCSCSSC
T ss_pred CcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC-CEEEEEECC-CHHHHHHHHHHHHhhcCCCCCcee
Confidence 569999999999 9999998 999999999999999999998774 999999998 466778888775 44444
Q ss_pred ccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 81 PFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
.+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 145 ~l~D~~--~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~ 183 (240)
T 3qpm_A 145 LLSDLT--HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI 183 (240)
T ss_dssp EEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred EEeCch--HHHHHHhCCccccCCCccceEEEEcCCCeEEEE
Confidence 455554 4699999998 68999999999999985
No 207
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.52 E-value=4.8e-14 Score=121.92 Aligned_cols=69 Identities=9% Similarity=0.173 Sum_probs=62.5
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++|||+|||+||+||+.+.|.|.+++++++++ +.|+.|++|..+ +++..|+|+
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~---v~f~kVDVDe~~-----------------------e~a~~y~V~ 94 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF---CVIYLVDITEVP-----------------------DFNTMYELY 94 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTCC-----------------------TTTTTTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHccCC---cEEEEEECCCCH-----------------------HHHHHcCCC
Confidence 689999999999999999999999999999765 889999998776 589999999
Q ss_pred CcceEEEECCCCcEEE
Q 008845 419 GIPMLVAIGPSGRTIT 434 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~ 434 (551)
++||++++ ++|+.+.
T Consensus 95 siPT~~fF-k~G~~v~ 109 (160)
T 2av4_A 95 DPVSVMFF-YRNKHMM 109 (160)
T ss_dssp SSEEEEEE-ETTEEEE
T ss_pred CCCEEEEE-ECCEEEE
Confidence 99999999 7888873
No 208
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.52 E-value=8.9e-15 Score=126.57 Aligned_cols=92 Identities=18% Similarity=0.402 Sum_probs=74.4
Q ss_pred CCccce-e-cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChHHHHHHH
Q 008845 319 GDLDFV-V-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFF 393 (551)
Q Consensus 319 ~~~~f~-~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 393 (551)
..|+|. + +.++....+++.+||++||+||++||++|+.+.|.+ .++++.++ ++.++.|+++...
T Consensus 9 ~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~----~~~~~~vd~~~~~------- 77 (134)
T 2fwh_A 9 THLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA----DTVLLQANVTAND------- 77 (134)
T ss_dssp -CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT----TSEEEEEECTTCC-------
T ss_pred cCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc----CcEEEEEeCCCCc-------
Confidence 346665 4 555556677777899999999999999999999988 88877774 3889999887542
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCCcceEEEECCCCcEE
Q 008845 394 KGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTI 433 (551)
Q Consensus 394 ~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~ 433 (551)
+....+++.|+|.++|+++++|++|+++
T Consensus 78 ------------~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 78 ------------AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp ------------HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred ------------chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 2345789999999999999999999997
No 209
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.52 E-value=3.6e-14 Score=127.17 Aligned_cols=102 Identities=21% Similarity=0.166 Sum_probs=86.8
Q ss_pred ccCceeecccCCCc-EEEEEec-CCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCC-CccccCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPW-LAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~ 84 (551)
.+|+.+++++++|| ++|+||+ +||++|+.++|.|+++++++ . ++.+++|+.| +.+..++|.++++. .+..+.|
T Consensus 30 ~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~-~v~vv~is~d-~~~~~~~~~~~~~~~~~~~l~D 105 (163)
T 1psq_A 30 TDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--D-NTVVLTVSMD-LPFAQKRWCGAEGLDNAIMLSD 105 (163)
T ss_dssp TTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T-TEEEEEEESS-CHHHHHHHHHHHTCTTSEEEEC
T ss_pred CCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--C-CcEEEEEECC-CHHHHHHHHHhcCCCCcEEecC
Confidence 46889999999999 9999995 99999999999999999998 3 5999999998 56778899998877 5544555
Q ss_pred -hhhHHHHHhhcCCC----C--CcEEEEEcCCCeEEEc
Q 008845 85 -SETRDKLDELFKVM----G--IPHLVILDENGKVLSD 115 (551)
Q Consensus 85 -~~~~~~l~~~~~v~----~--~P~~~lid~~G~i~~~ 115 (551)
.. ..+.+.|++. + .|+++++|++|+|+..
T Consensus 106 ~~~--~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 141 (163)
T 1psq_A 106 YFD--HSFGRDYALLINEWHLLARAVFVLDTDNTIRYV 141 (163)
T ss_dssp TTT--CHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEE
T ss_pred Cch--hHHHHHhCCccccCCceEEEEEEEcCCCeEEEE
Confidence 33 4688999987 3 3999999999999985
No 210
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.51 E-value=1.7e-14 Score=124.69 Aligned_cols=84 Identities=10% Similarity=0.214 Sum_probs=69.2
Q ss_pred ceecccCceeecccC--CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCcc
Q 008845 4 MKIYELLLRVKLDSL--KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAV 80 (551)
Q Consensus 4 ~~~~~~~~~v~l~~~--~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~ 80 (551)
++.+.+...+...-. .++ |||+|||+|||||+.+.|.|.++++++.. .+.++.|++|+..+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e-------------- 86 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPD-------------- 86 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCT--------------
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHH--------------
Confidence 456666666643222 356 99999999999999999999999999974 48899999997754
Q ss_pred ccCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEE
Q 008845 81 PFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 114 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 114 (551)
++..|+|.++||+++| ++|+.+.
T Consensus 87 ----------~a~~y~V~siPT~~fF-k~G~~v~ 109 (160)
T 2av4_A 87 ----------FNTMYELYDPVSVMFF-YRNKHMM 109 (160)
T ss_dssp ----------TTTTTTCCSSEEEEEE-ETTEEEE
T ss_pred ----------HHHHcCCCCCCEEEEE-ECCEEEE
Confidence 8899999999999999 7888873
No 211
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.51 E-value=2.8e-14 Score=128.79 Aligned_cols=106 Identities=22% Similarity=0.299 Sum_probs=88.6
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHh-hHhhhHHHHHHHHHhcCCC--CEEEEEEeCCC---CHHHHHHHHhhCCCCcc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGP-CQRFTPILAEVYNELSRQG--DFEVIFVSGDE---DDEAFKGYFSKMPWLAV 80 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~-C~~~~p~l~~~~~~~~~~~--~~~vv~v~~d~---~~~~~~~~~~~~~~~~~ 80 (551)
.+| .+++++++|| +||+||++||++ |+.++|.|.++++++++.+ ++.+++|++|. +.+.+++|+++++..+.
T Consensus 24 ~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~ 102 (172)
T 2k6v_A 24 PQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFL 102 (172)
T ss_dssp SSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEE
T ss_pred CCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcE
Confidence 467 9999999999 999999999997 9999999999999998642 59999999984 56889999999887666
Q ss_pred ccCChhh-HHHHHhhcCC---------------CCCcEEEEEcCCCeEEEc
Q 008845 81 PFSDSET-RDKLDELFKV---------------MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~-~~~l~~~~~v---------------~~~P~~~lid~~G~i~~~ 115 (551)
.+.+... ...+.+.|++ .++|+++|+| +|+++..
T Consensus 103 ~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~ 152 (172)
T 2k6v_A 103 GLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLL 152 (172)
T ss_dssp EECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEE
T ss_pred EEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEE
Confidence 6666542 2457777775 5789999999 9999875
No 212
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.51 E-value=4.1e-14 Score=126.63 Aligned_cols=103 Identities=20% Similarity=0.299 Sum_probs=88.5
Q ss_pred ccC--ceeeccc-CCCc-EEEEEe-cCCCHhhH-hhhHHHHHHHHHhcCCCCEE-EEEEeCCCCHHHHHHHHhhCCC--C
Q 008845 8 ELL--LRVKLDS-LKGK-IGLYFS-ASWCGPCQ-RFTPILAEVYNELSRQGDFE-VIFVSGDEDDEAFKGYFSKMPW--L 78 (551)
Q Consensus 8 ~~~--~~v~l~~-~~gk-vlv~F~-a~wC~~C~-~~~p~l~~~~~~~~~~~~~~-vv~v~~d~~~~~~~~~~~~~~~--~ 78 (551)
.+| +++++++ ++|| ++|+|| ++||++|+ .++|.|+++++++++.+ +. |++|+.| +.+..++|.++++. .
T Consensus 20 ~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~-v~~vv~Is~d-~~~~~~~~~~~~~~~~~ 97 (162)
T 1tp9_A 20 EQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG-VTEILCISVN-DPFVMKAWAKSYPENKH 97 (162)
T ss_dssp TTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT-CCCEEEEESS-CHHHHHHHHHTCTTCSS
T ss_pred CCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECC-CHHHHHHHHHhcCCCCC
Confidence 467 8999999 8999 999999 89999999 99999999999998764 88 9999998 67788999999887 4
Q ss_pred ccccCChhhHHHHHhhcCCC------C-----CcEEEEEcCCCeEEEc
Q 008845 79 AVPFSDSETRDKLDELFKVM------G-----IPHLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~~~~~~~~l~~~~~v~------~-----~P~~~lid~~G~i~~~ 115 (551)
+..+.|.+ ..+.+.|++. + .|++++|| +|+|+..
T Consensus 98 ~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~ 142 (162)
T 1tp9_A 98 VKFLADGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAA 142 (162)
T ss_dssp EEEEECTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEE
T ss_pred eEEEECCC--chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEE
Confidence 44455544 4689999986 3 79999999 9999985
No 213
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.50 E-value=1e-13 Score=120.15 Aligned_cols=92 Identities=21% Similarity=0.438 Sum_probs=74.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|... .+++.|+|.
T Consensus 38 ~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v~ 91 (136)
T 2l5l_A 38 DKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ---IVIYKVDTEKEQ-----------------------ELAGAFGIR 91 (136)
T ss_dssp SSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---EEEEEEeCCCCH-----------------------HHHHHcCCC
Confidence 789999999999999999999999999988754 899999988664 589999999
Q ss_pred CcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 419 GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
++|+++++|++|+++... | ... .++|.+.|++++...+
T Consensus 92 ~~Pt~~~~~~~G~~~~~~--------G----~~~---~~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 92 SIPSILFIPMEGKPEMAQ--------G----AMP---KASFKKAIDEFLLKKE 129 (136)
T ss_dssp SSCEEEEECSSSCCEEEE--------S----CCC---HHHHHHHHHHHHTSCT
T ss_pred CCCEEEEECCCCcEEEEe--------C----CCC---HHHHHHHHHHHhhccC
Confidence 999999999999987321 1 122 2456677777665443
No 214
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.50 E-value=4.5e-14 Score=126.89 Aligned_cols=103 Identities=13% Similarity=0.098 Sum_probs=88.0
Q ss_pred ccCceeecccC-CCc-EEEEEe-cCCCHhhHh-hhHHHHHHHHHhcCCCCE-EEEEEeCCCCHHHHHHHHhhCCCC--cc
Q 008845 8 ELLLRVKLDSL-KGK-IGLYFS-ASWCGPCQR-FTPILAEVYNELSRQGDF-EVIFVSGDEDDEAFKGYFSKMPWL--AV 80 (551)
Q Consensus 8 ~~~~~v~l~~~-~gk-vlv~F~-a~wC~~C~~-~~p~l~~~~~~~~~~~~~-~vv~v~~d~~~~~~~~~~~~~~~~--~~ 80 (551)
.+|+.++++++ +|| ++|+|| ++|||+|+. ++|.|+++++++++.+ + .|++|+.| +.+..++|.++.+.. +.
T Consensus 18 ~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g-v~~vv~Is~d-~~~~~~~~~~~~~~~~~fp 95 (167)
T 2wfc_A 18 TPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKG-VDIIACMAVN-DSFVMDAWGKAHGADDKVQ 95 (167)
T ss_dssp STTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTT-CCEEEEEESS-CHHHHHHHHHHTTCTTTSE
T ss_pred CCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCC-CHHHHHHHHHhcCCCcceE
Confidence 46789999998 999 888876 999999999 9999999999998764 9 99999997 577889999998876 55
Q ss_pred ccCChhhHHHHHhhcCCCCC-----------cEEEEEcCCCeEEEc
Q 008845 81 PFSDSETRDKLDELFKVMGI-----------PHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~~~-----------P~~~lid~~G~i~~~ 115 (551)
.+.|.+ ..+.+.|++... |+++|| ++|+|+..
T Consensus 96 ~l~D~~--~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 96 MLADPG--GAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKV 138 (167)
T ss_dssp EEECTT--SHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEE
T ss_pred EEECCC--CcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEE
Confidence 455654 468899998754 999999 99999985
No 215
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.50 E-value=4.1e-14 Score=117.63 Aligned_cols=70 Identities=23% Similarity=0.501 Sum_probs=62.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|... .+++.|+|
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~----~~~~~~vd~~~~~-----------------------~l~~~~~v 75 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP----QADFYKLDVDELG-----------------------DVAQKNEV 75 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999988875 3788999888664 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|++++++ +|+++.+
T Consensus 76 ~~~Pt~~~~~-~G~~~~~ 92 (109)
T 3f3q_A 76 SAMPTLLLFK-NGKEVAK 92 (109)
T ss_dssp CSSSEEEEEE-TTEEEEE
T ss_pred CccCEEEEEE-CCEEEEE
Confidence 9999999996 8999887
No 216
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.50 E-value=8.3e-15 Score=131.41 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=90.5
Q ss_pred ccCceeecccC--CCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccC
Q 008845 8 ELLLRVKLDSL--KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 83 (551)
Q Consensus 8 ~~~~~v~l~~~--~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 83 (551)
.+|+.++|+++ +|| ++|+|| ++|||+|+.++|.|+++++++++.+ +.+++|+.| +.+..++|..+++..+..+.
T Consensus 19 ~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~-v~vv~is~d-~~~~~~~~~~~~~~~fp~l~ 96 (164)
T 4gqc_A 19 QDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN-AEVLAISVD-SPWCLKKFKDENRLAFNLLS 96 (164)
T ss_dssp TTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSS-SEEEEEESS-CHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccC-ceEEEecCC-CHHHHHHHHHhcCcccceee
Confidence 57889999998 899 888888 9999999999999999999998874 899999987 67888999999988776666
Q ss_pred ChhhHHHHHhhcCCC----------CCcEEEEEcCCCeEEEc
Q 008845 84 DSETRDKLDELFKVM----------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~----------~~P~~~lid~~G~i~~~ 115 (551)
|.+ ..+.+.||+. ..|++||||++|+|+..
T Consensus 97 D~~--~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~ 136 (164)
T 4gqc_A 97 DYN--REVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK 136 (164)
T ss_dssp CTT--SHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE
T ss_pred cCc--hHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE
Confidence 665 4689999984 47999999999999874
No 217
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.50 E-value=2.9e-14 Score=128.04 Aligned_cols=103 Identities=20% Similarity=0.145 Sum_probs=86.7
Q ss_pred ccCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCC-CccccCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPW-LAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~ 84 (551)
.+|+.+++++++|| +||+|| ++||++|+.++|.|+++++++ . ++.|++|+.| +.+.+++|+++++. .+..+.|
T Consensus 31 ~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~-~v~vv~Is~d-~~~~~~~~~~~~~~~~~~~l~D 106 (165)
T 1q98_A 31 NDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--S-NTIVLCISAD-LPFAQARFCGAEGIENAKTVST 106 (165)
T ss_dssp TTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--T-TEEEEEEESS-CHHHHTTCTTTTTCTTEEEEEC
T ss_pred CCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--C-CCEEEEEeCC-CHHHHHHHHHHcCCCceEEeec
Confidence 46889999999999 999999 899999999999999999999 3 5999999997 56778888888877 4554555
Q ss_pred hhhHHHHHhhcCCCC---------CcEEEEEcCCCeEEEc
Q 008845 85 SETRDKLDELFKVMG---------IPHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~~~~~~l~~~~~v~~---------~P~~~lid~~G~i~~~ 115 (551)
.. ...+.+.|++.. .|+++++|++|+|+..
T Consensus 107 ~~-~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~ 145 (165)
T 1q98_A 107 FR-NHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHS 145 (165)
T ss_dssp TT-CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred cc-cchHHHHhCceecccccCCccceeEEEEcCCCEEEEE
Confidence 41 146889999863 5999999999999985
No 218
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.49 E-value=3.4e-14 Score=119.55 Aligned_cols=70 Identities=20% Similarity=0.422 Sum_probs=62.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|..+ .+++.|+|
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~-----------------------~l~~~~~v 82 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS----NVIFLEVDVDDCQ-----------------------DVASECEV 82 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT----TSEEEEEETTTTH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEECCCCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999887764 3788899887664 68999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 83 ~~~Pt~~~~-~~G~~~~~ 99 (116)
T 3qfa_C 83 KSMPTFQFF-KKGQKVGE 99 (116)
T ss_dssp CSSSEEEEE-SSSSEEEE
T ss_pred ccccEEEEE-eCCeEEEE
Confidence 999999999 88998877
No 219
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.49 E-value=1.2e-13 Score=124.69 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=86.0
Q ss_pred ccCceeeccc-CCCc-EEEEE-ecCCCHhhH-hhhHHHHHHHHHhcCCCCEEEEE-EeCCCCHHHHHHHHhhCCCC--cc
Q 008845 8 ELLLRVKLDS-LKGK-IGLYF-SASWCGPCQ-RFTPILAEVYNELSRQGDFEVIF-VSGDEDDEAFKGYFSKMPWL--AV 80 (551)
Q Consensus 8 ~~~~~v~l~~-~~gk-vlv~F-~a~wC~~C~-~~~p~l~~~~~~~~~~~~~~vv~-v~~d~~~~~~~~~~~~~~~~--~~ 80 (551)
.+|+.+++++ ++|| ++|+| |++||++|+ .++|.|+++++++++.| +.+++ |+.| +....++|.++.+.. +.
T Consensus 30 ~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g-v~vv~~iS~D-~~~~~~~f~~~~~~~~~fp 107 (173)
T 3mng_A 30 EPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG-VQVVACLSVN-DAFVTGEWGRAHKAEGKVR 107 (173)
T ss_dssp STTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT-CCEEEEEESS-CHHHHHHHHHHTTCTTTCE
T ss_pred CCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEEcCC-CHHHHHHHHHHhCCCCceE
Confidence 5789999999 6999 66655 599999999 59999999999998875 88886 8888 677889999999876 55
Q ss_pred ccCChhhHHHHHhhcCCC-------------CCcEEEEEcCCCeEEEc
Q 008845 81 PFSDSETRDKLDELFKVM-------------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~-------------~~P~~~lid~~G~i~~~ 115 (551)
.+.|.+ ..+++.||+. ..|+++||| +|+|+..
T Consensus 108 ~l~D~~--~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~ 152 (173)
T 3mng_A 108 LLADPT--GAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKAL 152 (173)
T ss_dssp EEECTT--CHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEE
T ss_pred EEECCC--hHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEE
Confidence 566655 4688999986 359999999 9999985
No 220
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.49 E-value=5.9e-14 Score=126.15 Aligned_cols=101 Identities=21% Similarity=0.203 Sum_probs=87.2
Q ss_pred ccCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCC-CccccCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPW-LAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~ 84 (551)
.+|+.+++++++|| ++|+|| ++||++|+.++|.|++++++ . ++.|++|+.| +.+.+++|.++++. .+..+.|
T Consensus 34 ~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~-~~~vv~is~d-~~~~~~~~~~~~~~~~~~~l~D 108 (166)
T 3p7x_A 34 NDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---E-EGIVLTISAD-LPFAQKRWCASAGLDNVITLSD 108 (166)
T ss_dssp TTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---T-TSEEEEEESS-CHHHHHHHHHHHTCSSCEEEEC
T ss_pred CCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---C-CCEEEEEECC-CHHHHHHHHHHcCCCceEEccC
Confidence 46889999999999 999999 78999999999999999877 3 5899999987 67889999999887 5555555
Q ss_pred h-hhHHHHHhhcCCCC------CcEEEEEcCCCeEEEc
Q 008845 85 S-ETRDKLDELFKVMG------IPHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~-~~~~~l~~~~~v~~------~P~~~lid~~G~i~~~ 115 (551)
. + ..+.+.|++.. +|+++|||++|+|+..
T Consensus 109 ~~~--~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 144 (166)
T 3p7x_A 109 HRD--LSFGENYGVVMEELRLLARAVFVLDADNKVVYK 144 (166)
T ss_dssp TTT--CHHHHHHTCEETTTTEECCEEEEECTTCBEEEE
T ss_pred Cch--hHHHHHhCCccccCCceeeEEEEECCCCeEEEE
Confidence 5 3 36889999985 8999999999999985
No 221
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.49 E-value=9.7e-14 Score=121.01 Aligned_cols=80 Identities=26% Similarity=0.439 Sum_probs=70.4
Q ss_pred cCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhh
Q 008845 9 LLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSET 87 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (551)
.+..++++.++|+ ++|+||++||++|+.+.|.|.++++.+.. ++.++.|+++.+.
T Consensus 40 ~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~---------------------- 95 (141)
T 3hxs_A 40 ENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEP---------------------- 95 (141)
T ss_dssp SSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH----------------------
T ss_pred ccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCH----------------------
Confidence 3556778888899 99999999999999999999999999974 4889999988764
Q ss_pred HHHHHhhcCCCCCcEEEEEcCCCeEEE
Q 008845 88 RDKLDELFKVMGIPHLVILDENGKVLS 114 (551)
Q Consensus 88 ~~~l~~~~~v~~~P~~~lid~~G~i~~ 114 (551)
.+++.|+|.++|++++++++|+++.
T Consensus 96 --~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 96 --ELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp --HHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred --HHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 3889999999999999999998764
No 222
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.48 E-value=1e-13 Score=133.01 Aligned_cols=103 Identities=18% Similarity=0.263 Sum_probs=87.4
Q ss_pred cCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------CCCc
Q 008845 9 LLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------PWLA 79 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~~~~ 79 (551)
+|+.++|++++|| +||+|| ++||++|..++|.|+++++++++.+ +.|++|++| +.+...+|++.. ++.+
T Consensus 80 ~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~g-v~vv~IS~D-~~~~~~~~~~~~~~~~g~~~~~f 157 (254)
T 3tjj_A 80 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN-TEVVACSVD-SQFTHLAWINTPRRQGGLGPIRI 157 (254)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTT-EEEEEEESS-CHHHHHHHHTSCGGGTSCCSCSS
T ss_pred CCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC-CEEEEEcCC-CHHHHHHHHHHHHHhcCCccccc
Confidence 4679999999999 999999 9999999999999999999998774 999999998 566778888765 4444
Q ss_pred cccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
..+.|.. ..+.+.|++. .+|++||||++|+|+..
T Consensus 158 p~l~D~~--~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 158 PLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp CEEECTT--SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred ceeeCcH--HHHHHHcCCccccCCCccceEEEECCCCeEEEE
Confidence 4455544 4689999996 58999999999999985
No 223
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.48 E-value=1.1e-13 Score=125.07 Aligned_cols=101 Identities=20% Similarity=0.134 Sum_probs=86.3
Q ss_pred ccCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCC-CccccCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPW-LAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~ 84 (551)
.+|+.+++++++|| ++|+|| ++||++|+.++|.|+++++++ . ++.+++|+.| +.+..++|.++++. .+..+.|
T Consensus 35 ~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~-~v~vv~Is~d-~~~~~~~~~~~~~~~~~~~l~D 110 (171)
T 2yzh_A 35 KDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--E-GVDVTVVSMD-LPFAQKRFCESFNIQNVTVASD 110 (171)
T ss_dssp TTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T-TEEEEEEESS-CHHHHHHHHHHTTCCSSEEEEC
T ss_pred CCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--C-CceEEEEeCC-CHHHHHHHHHHcCCCCeEEeec
Confidence 46889999999999 999999 899999999999999999998 3 5999999998 56778999999887 5555555
Q ss_pred -hhhHHHHHhhcCCCC---------CcEEEEEcCCCeEEEc
Q 008845 85 -SETRDKLDELFKVMG---------IPHLVILDENGKVLSD 115 (551)
Q Consensus 85 -~~~~~~l~~~~~v~~---------~P~~~lid~~G~i~~~ 115 (551)
.. ..+ +.|++.. +|+++++|++|+|+..
T Consensus 111 ~~~--~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~ 148 (171)
T 2yzh_A 111 FRY--RDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYV 148 (171)
T ss_dssp TTT--CGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred Ccc--CcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEE
Confidence 33 357 8999862 6999999999999985
No 224
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.48 E-value=1.1e-13 Score=114.19 Aligned_cols=84 Identities=17% Similarity=0.275 Sum_probs=56.9
Q ss_pred ceecccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCcccc
Q 008845 4 MKIYELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPF 82 (551)
Q Consensus 4 ~~~~~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 82 (551)
|..+.+.+.+...--.++ ++|+|||+||++|+.+.|.+.++++++. ++.++.|+++...+
T Consensus 2 m~~i~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~---------------- 62 (105)
T 4euy_A 2 MNTFKTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQE---------------- 62 (105)
T ss_dssp --------CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC------------------
T ss_pred ccccCCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHH----------------
Confidence 445555555543333578 9999999999999999999999999884 58899999887643
Q ss_pred CChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 83 SDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 83 ~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+++.|+|.++|+++++ ++|+++.+
T Consensus 63 --------l~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (105)
T 4euy_A 63 --------IAGRYAVFTGPTVLLF-YNGKEILR 86 (105)
T ss_dssp ---------------CCCCEEEEE-ETTEEEEE
T ss_pred --------HHHhcCCCCCCEEEEE-eCCeEEEE
Confidence 8899999999999999 58988764
No 225
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.48 E-value=7.9e-14 Score=127.16 Aligned_cols=102 Identities=14% Similarity=0.177 Sum_probs=85.6
Q ss_pred cC-ceeeccc-CCCc-EE-EEEecCCCHhhHh-hhHHHHHHHHHhcCCCCEE-EEEEeCCCCHHHHHHHHhhCCCC--cc
Q 008845 9 LL-LRVKLDS-LKGK-IG-LYFSASWCGPCQR-FTPILAEVYNELSRQGDFE-VIFVSGDEDDEAFKGYFSKMPWL--AV 80 (551)
Q Consensus 9 ~~-~~v~l~~-~~gk-vl-v~F~a~wC~~C~~-~~p~l~~~~~~~~~~~~~~-vv~v~~d~~~~~~~~~~~~~~~~--~~ 80 (551)
+| +.+++++ ++|| ++ ++||++|||+|+. ++|.|+++++++++.| +. |++|+.| +....++|.++.+.. +.
T Consensus 43 ~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g-v~~vv~Is~d-~~~~~~~f~~~~~~~~~fp 120 (184)
T 3uma_A 43 DGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG-VDDIAVVAVN-DLHVMGAWATHSGGMGKIH 120 (184)
T ss_dssp TEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT-CCEEEEEESS-CHHHHHHHHHHHTCTTTSE
T ss_pred CCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC-CCEEEEEECC-CHHHHHHHHHHhCCCCceE
Confidence 67 8999999 8999 55 5566999999999 7999999999999875 88 9999998 677889999998877 55
Q ss_pred ccCChhhHHHHHhhcCCC-----------CCcEEEEEcCCCeEEEc
Q 008845 81 PFSDSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 115 (551)
.+.|.+ ..+.+.|++. ..|+++||| +|+|+..
T Consensus 121 ~l~D~~--~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~ 163 (184)
T 3uma_A 121 FLSDWN--AAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKAL 163 (184)
T ss_dssp EEECTT--CHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEE
T ss_pred EEEcCc--hHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEE
Confidence 566655 4699999985 358899996 9999985
No 226
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.47 E-value=2e-13 Score=123.13 Aligned_cols=108 Identities=21% Similarity=0.278 Sum_probs=82.1
Q ss_pred ccCceeecccCCCc-EEEEEecCCCH-hhHhhhHHHHHHHHHhcCCC-CEEEEEEeCC---CCHHHHHHHHhhCCCCccc
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCG-PCQRFTPILAEVYNELSRQG-DFEVIFVSGD---EDDEAFKGYFSKMPWLAVP 81 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~-~C~~~~p~l~~~~~~~~~~~-~~~vv~v~~d---~~~~~~~~~~~~~~~~~~~ 81 (551)
++|+++++++++|| +||+||++||+ .|...++.|.++++.+++.+ ++.+++|++| ++.+.+++|.++++.....
T Consensus 20 ~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~ 99 (170)
T 4hde_A 20 QDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSN 99 (170)
T ss_dssp TTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTT
T ss_pred CCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCC
Confidence 58999999999999 99999999997 79999999999999987655 6899999998 3678899999887643221
Q ss_pred ---cC--ChhhHHH-HHhhcCC----------CCCcEEEEEcCCCeEEEc
Q 008845 82 ---FS--DSETRDK-LDELFKV----------MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 82 ---~~--~~~~~~~-l~~~~~v----------~~~P~~~lid~~G~i~~~ 115 (551)
+. ....... ....|++ ...|+++|||++|+++..
T Consensus 100 ~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~ 149 (170)
T 4hde_A 100 WNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKK 149 (170)
T ss_dssp EEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEE
T ss_pred ceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEE
Confidence 11 1111112 2223433 345899999999999864
No 227
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.47 E-value=1.4e-13 Score=113.97 Aligned_cols=72 Identities=24% Similarity=0.460 Sum_probs=64.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|..+ .+++.|+|
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~i 73 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK---AVFGRLNVDENQ-----------------------KIADKYSV 73 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC---ceEEEEccccCH-----------------------HHHHhcCc
Confidence 3899999999999999999999999999998764 889999988765 58999999
Q ss_pred CCcceEEEECCCCcEEEcc
Q 008845 418 SGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~ 436 (551)
.++|+++++ ++|+++.+.
T Consensus 74 ~~~Pt~~~~-~~g~~~~~~ 91 (109)
T 3tco_A 74 LNIPTTLIF-VNGQLVDSL 91 (109)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred ccCCEEEEE-cCCcEEEee
Confidence 999999999 999998873
No 228
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=6.8e-14 Score=120.10 Aligned_cols=100 Identities=14% Similarity=0.280 Sum_probs=74.1
Q ss_pred eecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhh
Q 008845 332 VPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARK 408 (551)
Q Consensus 332 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~ 408 (551)
+.+++.+||++||+||++||++|+.+.|.+ .++.+.+... +.++.|+++.+. .
T Consensus 20 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~---------------------~ 75 (130)
T 2kuc_A 20 LKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH---FVNLKMDMEKGE---------------------G 75 (130)
T ss_dssp HHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH---SEEEEECSSSTT---------------------H
T ss_pred HHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC---eEEEEEecCCcc---------------------h
Confidence 334444689999999999999999999998 6666666544 677777766422 2
Q ss_pred HHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 409 ASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 409 ~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
..+++.|+|.++|+++++|++|+++.+..+. .. .++|.+.|++++..
T Consensus 76 ~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~-----------~~---~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 76 VELRKKYGVHAYPTLLFINSSGEVVYRLVGA-----------ED---APELLKKVKLGVES 122 (130)
T ss_dssp HHHHHHTTCCSSCEEEEECTTSCEEEEEESC-----------CC---HHHHHHHHHHHHSC
T ss_pred HHHHHHcCCCCCCEEEEECCCCcEEEEecCC-----------CC---HHHHHHHHHHHHHh
Confidence 4689999999999999999999998863221 12 24566777776654
No 229
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.47 E-value=2.3e-14 Score=122.53 Aligned_cols=73 Identities=8% Similarity=0.124 Sum_probs=62.4
Q ss_pred CCEEEEEEecCC--ChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008845 339 GKTILLYFSAHW--CPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 416 (551)
Q Consensus 339 gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 416 (551)
+++|||+|||+| |++|+.+.|.|.+++++|.++ .+.|+.|++|.++ +++..|+
T Consensus 34 ~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~--~v~~~KVdvDe~~-----------------------~lA~~yg 88 (140)
T 2qgv_A 34 APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDY--TWQVAIADLEQSE-----------------------AIGDRFG 88 (140)
T ss_dssp CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTS--CCEEEECCHHHHH-----------------------HHHHHHT
T ss_pred CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCC--eEEEEEEECCCCH-----------------------HHHHHcC
Confidence 668899999999 999999999999999988642 1677777776543 6999999
Q ss_pred CCCcceEEEECCCCcEEEccc
Q 008845 417 VSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 417 v~~~P~~~lid~~G~i~~~~~ 437 (551)
|+++||+++| ++|+++.+..
T Consensus 89 V~sIPTlilF-k~G~~v~~~~ 108 (140)
T 2qgv_A 89 AFRFPATLVF-TGGNYRGVLN 108 (140)
T ss_dssp CCSSSEEEEE-ETTEEEEEEE
T ss_pred CccCCEEEEE-ECCEEEEEEe
Confidence 9999999999 8999998843
No 230
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.47 E-value=6.2e-14 Score=130.01 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=87.9
Q ss_pred ccCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCC-CccccCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPW-LAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~ 84 (551)
.+|+.+++++++|| ++|+|| ++||++|+.++|.|+++++++ . ++.|++|+.| +.+.+++|.++++. .+..+.|
T Consensus 66 ~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~-~v~vv~Is~D-~~~~~~~~~~~~~~~~f~~l~D 141 (200)
T 3zrd_A 66 KDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--E-NTVVLCISSD-LPFAQSRFCGAEGLSNVITLST 141 (200)
T ss_dssp TTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--T-TEEEEEEESS-CHHHHTTCTTTTTCTTEEEEET
T ss_pred CCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--C-CCEEEEEECC-CHHHHHHHHHHcCCCCceEEec
Confidence 47889999999999 999999 789999999999999999999 3 5999999998 67788889888887 6655666
Q ss_pred hhhHHHHHhhcCCC---------CCcEEEEEcCCCeEEEc
Q 008845 85 SETRDKLDELFKVM---------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~~~~~~l~~~~~v~---------~~P~~~lid~~G~i~~~ 115 (551)
.. ...+.+.|++. ..|+++|||++|+|+..
T Consensus 142 ~~-~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~ 180 (200)
T 3zrd_A 142 LR-GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYS 180 (200)
T ss_dssp TS-CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred Cc-hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEE
Confidence 51 24688999986 36999999999999975
No 231
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.47 E-value=8.5e-14 Score=118.57 Aligned_cols=72 Identities=22% Similarity=0.368 Sum_probs=64.9
Q ss_pred CCEEEEEEecCCC--hhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008845 339 GKTILLYFSAHWC--PPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 416 (551)
Q Consensus 339 gk~vll~F~a~wC--~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 416 (551)
+++|||+|||+|| ++|+.+.|.|.++.++|.++ +.++.|++|.++ +++..|+
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~---v~~~KVdvDe~~-----------------------~la~~yg 86 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR---LVAAEVAAEAER-----------------------GLMARFG 86 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT---EEEEEECGGGHH-----------------------HHHHHHT
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC---cEEEEEECCCCH-----------------------HHHHHcC
Confidence 4599999999999 99999999999999999765 899999887654 6999999
Q ss_pred CCCcceEEEECCCCcEEEccc
Q 008845 417 VSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 417 v~~~P~~~lid~~G~i~~~~~ 437 (551)
|+++||+++| ++|+++.+..
T Consensus 87 V~siPTlilF-kdG~~v~~~v 106 (137)
T 2qsi_A 87 VAVCPSLAVV-QPERTLGVIA 106 (137)
T ss_dssp CCSSSEEEEE-ECCEEEEEEE
T ss_pred CccCCEEEEE-ECCEEEEEEe
Confidence 9999999999 8999999843
No 232
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.46 E-value=2.5e-13 Score=116.38 Aligned_cols=80 Identities=23% Similarity=0.425 Sum_probs=68.8
Q ss_pred cCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhh
Q 008845 9 LLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSET 87 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (551)
.++.++....+|+ ++|+||++||++|+.+.|.+.++++++++ ++.++.|+++...
T Consensus 31 ~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~---------------------- 86 (128)
T 3ul3_B 31 GSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNE---------------------- 86 (128)
T ss_dssp CCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCH----------------------
T ss_pred CccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCH----------------------
Confidence 3445666777899 99999999999999999999999999974 5889999988664
Q ss_pred HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 88 RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 88 ~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 87 --~l~~~~~v~~~Pt~~~~-~~G~~~~~ 111 (128)
T 3ul3_B 87 --SLARKFSVKSLPTIILL-KNKTMLAR 111 (128)
T ss_dssp --HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred --HHHHHcCCCCcCEEEEE-ECCEEEEE
Confidence 48899999999999999 78988764
No 233
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.46 E-value=1.8e-13 Score=114.20 Aligned_cols=72 Identities=26% Similarity=0.541 Sum_probs=64.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+. .+++.|+|
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v 69 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK---LKIVKIDVDENQ-----------------------ETAGKYGV 69 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT---CEEEEEETTTCC-----------------------SHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---cEEEEEECCCCH-----------------------HHHHHcCC
Confidence 5899999999999999999999999999998754 899999988654 48899999
Q ss_pred CCcceEEEECCCCcEEEcc
Q 008845 418 SGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~ 436 (551)
.++|+++++ ++|+++.+.
T Consensus 70 ~~~Pt~~~~-~~G~~~~~~ 87 (112)
T 2voc_A 70 MSIPTLLVL-KDGEVVETS 87 (112)
T ss_dssp CSBSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCEEEEEE
Confidence 999999999 899998763
No 234
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.46 E-value=2.4e-13 Score=119.62 Aligned_cols=105 Identities=19% Similarity=0.394 Sum_probs=80.8
Q ss_pred cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCc
Q 008845 326 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 405 (551)
Q Consensus 326 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 405 (551)
..+++.+......+++++|+||++||++|+.+.|.|+++++++.++ +.++.|++|..+
T Consensus 42 ~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~~~------------------- 99 (148)
T 3p2a_A 42 NATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK---VRFVKVNTEAEP------------------- 99 (148)
T ss_dssp ECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-------------------
T ss_pred ecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc---eEEEEEECcCCH-------------------
Confidence 4455554433346899999999999999999999999999998754 899999888765
Q ss_pred hhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 406 ARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 406 d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
.+++.|+|.++|+++++ ++|+++.+..+. .. .++|.+.|++++...|
T Consensus 100 ----~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~-----------~~---~~~l~~~l~~~l~~~~ 146 (148)
T 3p2a_A 100 ----ALSTRFRIRSIPTIMLY-RNGKMIDMLNGA-----------VP---KAPFDNWLDEQLSRDP 146 (148)
T ss_dssp ----HHHHHTTCCSSSEEEEE-ETTEEEEEESSC-----------CC---HHHHHHHHHHHHHSCC
T ss_pred ----HHHHHCCCCccCEEEEE-ECCeEEEEEeCC-----------CC---HHHHHHHHHHHhcccC
Confidence 58999999999999999 699988763221 22 3456666777666544
No 235
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.46 E-value=5.3e-14 Score=122.39 Aligned_cols=93 Identities=25% Similarity=0.484 Sum_probs=75.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
+||+++|+||++||++|+.+.|.|++++++++ ++.++.|++|... .+++.|+|
T Consensus 45 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~~~-----------------------~~~~~~~v 97 (139)
T 3d22_A 45 DGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDELS-----------------------DFSASWEI 97 (139)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCcccH-----------------------HHHHHcCC
Confidence 48999999999999999999999999988874 4899999988664 58999999
Q ss_pred CCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCCcc
Q 008845 418 SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPEN 473 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~~~ 473 (551)
.++|+++++ ++|+++.+.. | .. .++|.+.|++++...|.+
T Consensus 98 ~~~Pt~~~~-~~G~~~~~~~-------G-----~~---~~~l~~~l~~~~~~~~~~ 137 (139)
T 3d22_A 98 KATPTFFFL-RDGQQVDKLV-------G-----AN---KPELHKKITAILDSLPPS 137 (139)
T ss_dssp CEESEEEEE-ETTEEEEEEE-------S-----CC---HHHHHHHHHHHHHTSCTT
T ss_pred CcccEEEEE-cCCeEEEEEe-------C-----CC---HHHHHHHHHHHhccCCCC
Confidence 999999999 8999987632 2 12 255777777777765543
No 236
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.46 E-value=3.9e-14 Score=127.41 Aligned_cols=102 Identities=27% Similarity=0.268 Sum_probs=86.3
Q ss_pred ccCceeecccCCCc-EEEEEecCC-CHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCC-CccccCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASW-CGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPW-LAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~w-C~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~ 84 (551)
.+|+.+++++++|| ++|+||++| |++|+.++|.|+++++++ . ++.+++|+.| +.+.+++|.++++. .+..+.+
T Consensus 32 ~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~-~~~vv~is~d-~~~~~~~~~~~~~~~~~~~~~d 107 (167)
T 2jsy_A 32 NSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--G-DVNVYTISAD-LPFAQARWCGANGIDKVETLSD 107 (167)
T ss_dssp TTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--S-SCEEEEEECS-SGGGTSCCGGGSSCTTEEEEEG
T ss_pred CCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--C-CCEEEEEECC-CHHHHHHHHHhcCCCCceEeeC
Confidence 47889999999999 999999999 999999999999999999 3 5899999998 45567888888877 4444444
Q ss_pred -hhhHHHHHhhcCCCC------CcEEEEEcCCCeEEEc
Q 008845 85 -SETRDKLDELFKVMG------IPHLVILDENGKVLSD 115 (551)
Q Consensus 85 -~~~~~~l~~~~~v~~------~P~~~lid~~G~i~~~ 115 (551)
.. ..+.+.|++.. +|+++++|++|+|+..
T Consensus 108 ~~~--~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~ 143 (167)
T 2jsy_A 108 HRD--MSFGEAFGVYIKELRLLARSVFVLDENGKVVYA 143 (167)
T ss_dssp GGT--CHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEE
T ss_pred Cch--hHHHHHhCCccccCCceeeEEEEEcCCCcEEEE
Confidence 22 46889999987 4999999999999985
No 237
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.46 E-value=4.6e-14 Score=123.88 Aligned_cols=104 Identities=9% Similarity=0.105 Sum_probs=78.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHH--HHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYK--KIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~--~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
.||+|+|+|||+||++|+.+.|.+.+..+ .+.. ..++.|++|.+.. .++..|
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~----~~fv~V~vD~e~~----------------------~~~~~~ 96 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ----NKFIMLNLMHETT----------------------DKNLSP 96 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH----HTCEEEEESSCCS----------------------CGGGCT
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh----cCeEEEEecCCch----------------------hhHhhc
Confidence 38999999999999999999999876422 2221 2456667763321 235678
Q ss_pred CCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 416 KVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 416 ~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
++.++||+++++++|+++.+..+ .++...|++...+.+.+.+.++++++...
T Consensus 97 ~v~~~PT~~f~~~~G~~v~~~~G----~~~~~~~~~~~~~~~~ll~~~~~al~~~~ 148 (151)
T 3ph9_A 97 DGQYVPRIMFVDPSLTVRADIAG----RYSNRLYTYEPRDLPLLIENMKKALRLIQ 148 (151)
T ss_dssp TCCCSSEEEEECTTSCBCTTCCC----SCTTSTTCCCGGGHHHHHHHHHHHHSCCC
T ss_pred CCCCCCEEEEECCCCCEEEEEeC----CcCCcccccchhhHHHHHHHHHHHHHHHh
Confidence 99999999999999999987433 34556677888899999999998876543
No 238
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.46 E-value=1.1e-13 Score=125.46 Aligned_cols=101 Identities=22% Similarity=0.172 Sum_probs=81.7
Q ss_pred ccCceeecccCCCc-EEEEEecCC-CHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCC-CccccCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASW-CGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPW-LAVPFSD 84 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~w-C~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~ 84 (551)
.+|+.+++++++|| +||+||++| |++|+.++|.|++++++ . ++.+++|+.| +.+..++|++++++ .+..+.|
T Consensus 32 ~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~-~v~vv~Is~D-~~~~~~~~~~~~~~~~~~~l~D 106 (175)
T 1xvq_A 32 GDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---S-GATVLCVSKD-LPFAQKRFCGAEGTENVMPASA 106 (175)
T ss_dssp TTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---T-TCEEEEEESS-CHHHHTTCC------CEEEEEC
T ss_pred CCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---c-CCEEEEEECC-CHHHHHHHHHHcCCCCceEeeC
Confidence 46889999999999 999999999 99999999999999988 2 5899999997 45667888888776 4444555
Q ss_pred hhhHHHHHhhcCCCCC---------cEEEEEcCCCeEEEc
Q 008845 85 SETRDKLDELFKVMGI---------PHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~~~~~~l~~~~~v~~~---------P~~~lid~~G~i~~~ 115 (551)
.. ..+.+.|++... |+++|+|++|+|+..
T Consensus 107 ~~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~ 144 (175)
T 1xvq_A 107 FR--DSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYT 144 (175)
T ss_dssp TT--SSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEE
T ss_pred CH--HHHHHHhCCcccccccCCcccceEEEECCCCeEEEE
Confidence 44 458899999877 999999999999985
No 239
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.45 E-value=4e-13 Score=111.13 Aligned_cols=71 Identities=28% Similarity=0.584 Sum_probs=63.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ .+++.|+|
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 72 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNP-----------------------GTAPKYGI 72 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTCT-----------------------THHHHTTC
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC---cEEEEEECCCCH-----------------------HHHHHcCC
Confidence 4799999999999999999999999999988754 899999888654 48899999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 73 ~~~Pt~~~~-~~G~~~~~ 89 (108)
T 2trx_A 73 RGIPTLLLF-KNGEVAAT 89 (108)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred cccCEEEEE-eCCEEEEE
Confidence 999999999 89999876
No 240
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.45 E-value=1.7e-13 Score=122.69 Aligned_cols=104 Identities=16% Similarity=0.338 Sum_probs=89.2
Q ss_pred CeeecccC-CCCEEE-EEEecCCChhHHh-hhHHHHHHHHHHhhcCCCe-EEEEEeCCCChHHHHHHHhcCCCc-ccccC
Q 008845 330 GKVPVSDL-AGKTIL-LYFSAHWCPPCRA-FLPKLIDAYKKIKERNESL-EVVFISSDRDQTSFDEFFKGMPWL-ALPFG 404 (551)
Q Consensus 330 ~~v~l~~~-~gk~vl-l~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~-~vv~vs~d~~~~~~~~~~~~~~~~-~~~~~ 404 (551)
++++|+++ +||+++ +.||+.|||+|.. ++|.|.+.+++|+++ ++ +|+.||+| ++...++|.+.++.. ++|++
T Consensus 37 ~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~--g~d~VigIS~D-~~~~~~~f~~~~~l~~~f~lL 113 (176)
T 4f82_A 37 NACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAA--GIDEIWCVSVN-DAFVMGAWGRDLHTAGKVRMM 113 (176)
T ss_dssp EEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT--TCCEEEEEESS-CHHHHHHHHHHTTCTTTSEEE
T ss_pred eEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhC--CCCEEEEEeCC-CHHHHHHHHHHhCCCCCceEE
Confidence 67899997 998654 5666999999999 999999999999876 68 99999998 567888999888743 49999
Q ss_pred chhhHHHHHhcCCC------C-----cceEEEECCCCcEEEccc
Q 008845 405 DARKASLSRKFKVS------G-----IPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 405 ~d~~~~l~~~~~v~------~-----~P~~~lid~~G~i~~~~~ 437 (551)
.|.+..+++.||+. + .|+++|| ++|+|++...
T Consensus 114 sD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~ 156 (176)
T 4f82_A 114 ADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAV 156 (176)
T ss_dssp ECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEE
T ss_pred EcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEE
Confidence 99999999999983 2 4889999 9999998854
No 241
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.45 E-value=2e-13 Score=113.68 Aligned_cols=74 Identities=14% Similarity=0.389 Sum_probs=61.4
Q ss_pred ccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 335 SDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 335 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
.+..+++++|+||++||++|+.+.|.|.+++++++ ++.++.|+++.. ...+++.
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~----------------------~~~~~~~ 73 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL----DVIFLKLDCNQE----------------------NKTLAKE 73 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSST----------------------THHHHHH
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC----CeEEEEEecCcc----------------------hHHHHHH
Confidence 33458999999999999999999999999988875 378888888732 1368999
Q ss_pred cCCCCcceEEEECCCCcEEEc
Q 008845 415 FKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 415 ~~v~~~P~~~lid~~G~i~~~ 435 (551)
|+|+++||++++ ++|+++.+
T Consensus 74 ~~v~~~Pt~~~~-~~G~~~~~ 93 (111)
T 2pu9_C 74 LGIRVVPTFKIL-KENSVVGE 93 (111)
T ss_dssp HCCSBSSEEEEE-SSSSEEEE
T ss_pred cCCCeeeEEEEE-eCCcEEEE
Confidence 999999996555 89999876
No 242
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.45 E-value=5.3e-13 Score=113.90 Aligned_cols=77 Identities=19% Similarity=0.310 Sum_probs=65.0
Q ss_pred cccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 15 LDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 15 l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
.+..+|+ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+.+.+.. ..+++
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~----------------------~~~~~ 76 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKN----------------------IDLAY 76 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHH----------------------HHHHH
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCch----------------------HHHHH
Confidence 4555788 99999999999999999999999999872 58899999443322 45889
Q ss_pred hcCCCCCcEEEEEcCCCeEEEc
Q 008845 94 LFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 94 ~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.|++.++|++++++++|+++.+
T Consensus 77 ~~~v~~~Pt~~~~~~~G~~~~~ 98 (126)
T 2l57_A 77 KYDANIVPTTVFLDKEGNKFYV 98 (126)
T ss_dssp HTTCCSSSEEEEECTTCCEEEE
T ss_pred HcCCcceeEEEEECCCCCEEEE
Confidence 9999999999999989998863
No 243
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.44 E-value=6e-14 Score=126.86 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=66.4
Q ss_pred ecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChHHHH--HHHhcCCCcccccCchh
Q 008845 333 PVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFD--EFFKGMPWLALPFGDAR 407 (551)
Q Consensus 333 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~vv~vs~d~~~~~~~--~~~~~~~~~~~~~~~d~ 407 (551)
.++..+||+|||+|||+||++|+.+.+.+ .++.+.++++ +.++.|++|...+... .+.....+..+....+.
T Consensus 41 ~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~---~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (172)
T 3f9u_A 41 EYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINND---YVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDK 117 (172)
T ss_dssp HHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHH
T ss_pred HHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCC---EEEEEEecCcccccchhhhhhhcchhhhhhhhhhh
Confidence 34445699999999999999999975444 5555555544 8999999986532000 00000111112222222
Q ss_pred hHHH-HHhcCCCCcceEEEECCCCcEEEccc
Q 008845 408 KASL-SRKFKVSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 408 ~~~l-~~~~~v~~~P~~~lid~~G~i~~~~~ 437 (551)
...+ .+.|+|.++|+++|||++|+++.+..
T Consensus 118 ~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~ 148 (172)
T 3f9u_A 118 WSYLQRVKFGANAQPFYVLIDNEGNPLNKSY 148 (172)
T ss_dssp HHHHHHHHHSCCCSSEEEEECTTSCBSSCCB
T ss_pred hhHHHHHHcCCCCcceEEEECCCCCEEeecc
Confidence 3333 58999999999999999999988743
No 244
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.44 E-value=2.1e-13 Score=113.73 Aligned_cols=72 Identities=24% Similarity=0.558 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++.. ++.++.|++|..+ .+++.|+|
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~-----------------------~~~~~~~v 74 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS--NVSFLSIDADENS-----------------------EISELFEI 74 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT--TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC--CEEEEEEecccCH-----------------------HHHHHcCC
Confidence 4899999999999999999999999998886432 4899999888664 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|+++++ ++|+++.+
T Consensus 75 ~~~Pt~~~~-~~G~~~~~ 91 (112)
T 3d6i_A 75 SAVPYFIII-HKGTILKE 91 (112)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-ECCEEEEE
Confidence 999999999 79999886
No 245
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.44 E-value=2.7e-13 Score=115.52 Aligned_cols=70 Identities=23% Similarity=0.575 Sum_probs=62.3
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
++++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|... .+++.|+|
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~~~-----------------------~l~~~~~v 89 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDELK-----------------------SVASDWAI 89 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTSH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECccCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999988875 4889999887654 68999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 90 ~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1xfl_A 90 QAMPTFMFL-KEGKILDK 106 (124)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CccCEEEEE-ECCEEEEE
Confidence 999999888 89999876
No 246
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.44 E-value=7.8e-14 Score=124.85 Aligned_cols=77 Identities=21% Similarity=0.328 Sum_probs=63.9
Q ss_pred cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHH
Q 008845 334 VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSR 413 (551)
Q Consensus 334 l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~ 413 (551)
+++++|++++|+|||+|||||+.+.|.|+++++.++ ++.++.|++|..+ ++++
T Consensus 49 l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~~-----------------------~~~~ 101 (167)
T 1z6n_A 49 LQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRAE-----------------------DDLR 101 (167)
T ss_dssp HHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHHH-----------------------HHTT
T ss_pred HHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCCH-----------------------HHHH
Confidence 456779999999999999999999999999988764 4888888776443 4566
Q ss_pred hcC---CCCcceEEEECCCCcEEEccc
Q 008845 414 KFK---VSGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 414 ~~~---v~~~P~~~lid~~G~i~~~~~ 437 (551)
.|. ++++||++++|++|+++.+.+
T Consensus 102 ~~~~~~v~~iPt~i~~~~~G~~~~~~g 128 (167)
T 1z6n_A 102 QRLALERIAIPLVLVLDEEFNLLGRFV 128 (167)
T ss_dssp TTTTCSSCCSSEEEEECTTCCEEEEEE
T ss_pred HHHHcCCCCcCeEEEECCCCCEEEEEc
Confidence 665 999999999999999987643
No 247
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.44 E-value=1.9e-13 Score=112.44 Aligned_cols=71 Identities=25% Similarity=0.577 Sum_probs=63.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|++++++++++ +.++.|++|.+. .+++.|+|
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~~-----------------------~~~~~~~v 69 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK---VTVAKLNVDENP-----------------------ETTSQFGI 69 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---cEEEEEECcCCH-----------------------HHHHHcCC
Confidence 4789999999999999999999999999888654 899999988764 58899999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 70 ~~~Pt~~~~-~~G~~~~~ 86 (105)
T 1nsw_A 70 MSIPTLILF-KGGRPVKQ 86 (105)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred ccccEEEEE-eCCeEEEE
Confidence 999999999 89998876
No 248
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.44 E-value=9.3e-15 Score=131.10 Aligned_cols=108 Identities=16% Similarity=0.390 Sum_probs=75.6
Q ss_pred ccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 335 SDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 335 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
...+||+|||+|||+||++|+.+.|.|.++.+.+... +.++.|++|.+.+ .++..
T Consensus 42 ~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~~----------------------~~~~~ 96 (164)
T 1sen_A 42 AAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEEE----------------------PKDED 96 (164)
T ss_dssp HHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGGS----------------------CSCGG
T ss_pred HHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCch----------------------HHHHH
Confidence 3345899999999999999999999999977665543 5677888775431 13556
Q ss_pred cCC--CCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 415 FKV--SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 415 ~~v--~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
|++ .++||++++|++|+++.+..+. .+...|.+.....++|.+.|++++....
T Consensus 97 ~~~~~~~~Pt~~~~d~~G~~~~~~~G~----~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 151 (164)
T 1sen_A 97 FSPDGGYIPRILFLDPSGKVHPEIINE----NGNPSYKYFYVSAEQVVQGMKEAQERLT 151 (164)
T ss_dssp GCTTCSCSSEEEEECTTSCBCTTCCCT----TSCTTSTTCCCSHHHHHHHHHHHHHHHG
T ss_pred hcccCCcCCeEEEECCCCCEEEEEeCC----CCccchhcccCCHHHHHHHHHHHHHhcc
Confidence 777 6699999999999998763321 2222333333455667777777665433
No 249
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.44 E-value=4.6e-13 Score=111.60 Aligned_cols=71 Identities=28% Similarity=0.558 Sum_probs=63.4
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ .+++.|+|
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 75 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK---IEIVKLNIDENP-----------------------GTAAKYGV 75 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC---eEEEEEEcCCCH-----------------------HHHHhCCC
Confidence 3789999999999999999999999999988654 899999988764 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 76 ~~~Pt~~~~-~~G~~~~~ 92 (112)
T 1t00_A 76 MSIPTLNVY-QGGEVAKT 92 (112)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCEEEEE
Confidence 999999988 79999876
No 250
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.44 E-value=3.1e-13 Score=111.69 Aligned_cols=70 Identities=14% Similarity=0.247 Sum_probs=62.3
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|..+ .+++.|+|
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~-----------------------~~~~~~~v 72 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQCQ-----------------------GTAATNNI 72 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccCH-----------------------HHHHhcCC
Confidence 48999999999999999999999999988873 4889999988664 58899999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++||++++ ++|+++.+
T Consensus 73 ~~~Pt~~~~-~~G~~~~~ 89 (107)
T 1gh2_A 73 SATPTFQFF-RNKVRIDQ 89 (107)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-ECCeEEEE
Confidence 999999999 78998876
No 251
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=5.9e-13 Score=115.80 Aligned_cols=105 Identities=27% Similarity=0.461 Sum_probs=76.2
Q ss_pred cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCc
Q 008845 326 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 405 (551)
Q Consensus 326 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 405 (551)
..++..+...-..+|++||+||++||++|+.+.|.|.+++++++++..++.++.|+++...
T Consensus 21 ~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~------------------- 81 (140)
T 2dj1_A 21 VLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS------------------- 81 (140)
T ss_dssp ECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH-------------------
T ss_pred EcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH-------------------
Confidence 3444444432234899999999999999999999999999999865334777777766543
Q ss_pred hhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 406 ARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 406 d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
.+++.|+|.++|+++++ ++|++.... | ... .+.|.+.|++++..
T Consensus 82 ----~~~~~~~v~~~Pt~~~~-~~G~~~~~~--------g----~~~---~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 82 ----MLASKFDVSGYPTIKIL-KKGQAVDYD--------G----SRT---QEEIVAKVREVSQP 125 (140)
T ss_dssp ----HHHHHTTCCSSSEEEEE-ETTEEEECC--------S----CCC---HHHHHHHHHHHHSS
T ss_pred ----HHHHHCCCCccCeEEEE-ECCcEEEcC--------C----CCC---HHHHHHHHHHhcCC
Confidence 68999999999999999 788843321 1 122 34566777776654
No 252
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.43 E-value=2.3e-13 Score=112.20 Aligned_cols=71 Identities=20% Similarity=0.342 Sum_probs=55.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+|||+||++|+.+.|.+.++++++. ++.++.|++|..+ .+++.|+|
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~~-----------------------~l~~~~~v 69 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDMQ-----------------------EIAGRYAV 69 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC--------------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCCH-----------------------HHHHhcCC
Confidence 48999999999999999999999999988873 4899999988765 58899999
Q ss_pred CCcceEEEECCCCcEEEcc
Q 008845 418 SGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~ 436 (551)
+++||++++ ++|+++.+.
T Consensus 70 ~~~Pt~~~~-~~G~~~~~~ 87 (105)
T 4euy_A 70 FTGPTVLLF-YNGKEILRE 87 (105)
T ss_dssp CCCCEEEEE-ETTEEEEEE
T ss_pred CCCCEEEEE-eCCeEEEEE
Confidence 999999999 599998763
No 253
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.43 E-value=5.9e-13 Score=109.87 Aligned_cols=71 Identities=23% Similarity=0.556 Sum_probs=63.3
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ .+++.|+|.
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v~ 72 (107)
T 1dby_A 19 SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK---LKCVKLNTDESP-----------------------NVASEYGIR 72 (107)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHHTCC
T ss_pred CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc---eEEEEEECCCCH-----------------------HHHHHCCCC
Confidence 789999999999999999999999999988754 899999988664 588999999
Q ss_pred CcceEEEECCCCcEEEcc
Q 008845 419 GIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~~ 436 (551)
++|+++++ ++|+++.+.
T Consensus 73 ~~Pt~~~~-~~G~~~~~~ 89 (107)
T 1dby_A 73 SIPTIMVF-KGGKKCETI 89 (107)
T ss_dssp SSCEEEEE-SSSSEEEEE
T ss_pred cCCEEEEE-eCCEEEEEE
Confidence 99999988 799998763
No 254
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.43 E-value=4.9e-13 Score=110.04 Aligned_cols=71 Identities=24% Similarity=0.479 Sum_probs=64.3
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.+.+++++++++ +.++.|++|.++ .+++.|+|
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 71 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK---ADILKLDVDENP-----------------------STAAKYEV 71 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEECCcCH-----------------------HHHHhCCC
Confidence 5899999999999999999999999999998765 899999998765 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|+++++ ++|+++.+
T Consensus 72 ~~~Pt~~~~-~~G~~~~~ 88 (106)
T 3die_A 72 MSIPTLIVF-KDGQPVDK 88 (106)
T ss_dssp CSBSEEEEE-ETTEEEEE
T ss_pred cccCEEEEE-eCCeEEEE
Confidence 999999999 49998876
No 255
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.43 E-value=2.2e-13 Score=121.48 Aligned_cols=102 Identities=19% Similarity=0.167 Sum_probs=87.6
Q ss_pred ccCceeecccCCCc---EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccC
Q 008845 8 ELLLRVKLDSLKGK---IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 83 (551)
Q Consensus 8 ~~~~~v~l~~~~gk---vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 83 (551)
.+|+.+++++++|| ++|+|| ++||++|+.++|.|+++++++++.+ .|++|+.| +.+.+++|.++++..+..+.
T Consensus 21 ~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--~vv~is~d-~~~~~~~~~~~~~~~~~~l~ 97 (159)
T 2a4v_A 21 EDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA--AVFGLSAD-SVTSQKKFQSKQNLPYHLLS 97 (159)
T ss_dssp TTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC--EEEEEESC-CHHHHHHHHHHHTCSSEEEE
T ss_pred CCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC--cEEEEeCC-CHHHHHHHHHHhCCCceEEE
Confidence 46889999999875 778887 9999999999999999999998875 89999998 67788999999887665566
Q ss_pred ChhhHHHHHhhcCCCCCc------EEEEEcCCCeEEEc
Q 008845 84 DSETRDKLDELFKVMGIP------HLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~~~P------~~~lid~~G~i~~~ 115 (551)
|.. ..+.+.|++...| ++++| ++|+|+..
T Consensus 98 D~~--~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~ 132 (159)
T 2a4v_A 98 DPK--REFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFK 132 (159)
T ss_dssp CTT--CHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEE
T ss_pred CCc--cHHHHHhCCcccccCCccceEEEE-cCCEEEEE
Confidence 644 4688999999988 89999 99999985
No 256
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.43 E-value=3.2e-13 Score=112.54 Aligned_cols=70 Identities=17% Similarity=0.400 Sum_probs=62.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|... .+++.|+|.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~-----------------------~~~~~~~v~ 77 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG---KVIFLKVDVDAVA-----------------------AVAEAAGIT 77 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTTH-----------------------HHHHHHTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CeEEEEEECCchH-----------------------HHHHHcCCC
Confidence 78999999999999999999999999988865 3899999887654 589999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 78 ~~Pt~~~~-~~G~~~~~ 93 (112)
T 1ep7_A 78 AMPTFHVY-KDGVKADD 93 (112)
T ss_dssp BSSEEEEE-ETTEEEEE
T ss_pred cccEEEEE-ECCeEEEE
Confidence 99998888 79999876
No 257
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.43 E-value=1.4e-13 Score=118.85 Aligned_cols=93 Identities=16% Similarity=0.351 Sum_probs=69.1
Q ss_pred ecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHH
Q 008845 333 PVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLS 412 (551)
Q Consensus 333 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~ 412 (551)
.+++.+||++||+||++||++|+.+.|.|.++++++ ++.++.|++|... .++
T Consensus 34 ~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~~-----------------------~l~ 85 (133)
T 3cxg_A 34 VFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDIHP-----------------------KLN 85 (133)
T ss_dssp HHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTTCH-----------------------HHH
T ss_pred HHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccchH-----------------------HHH
Confidence 455667899999999999999999999998876654 2677777776553 689
Q ss_pred HhcCCCCcceEEEE-CCCCc--EEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhc
Q 008845 413 RKFKVSGIPMLVAI-GPSGR--TITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 468 (551)
Q Consensus 413 ~~~~v~~~P~~~li-d~~G~--i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~ 468 (551)
+.|+|+++|+++++ +++|+ ++.+.. | .. .++|.+.|++++.
T Consensus 86 ~~~~v~~~Pt~~~~~~~~g~g~~~~~~~-------G-----~~---~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 86 DQHNIKALPTFEFYFNLNNEWVLVHTVE-------G-----AN---QNDIEKAFQKYCL 129 (133)
T ss_dssp HHTTCCSSSEEEEEEEETTEEEEEEEEE-------S-----CC---HHHHHHHHHHHSE
T ss_pred HhcCCCCCCEEEEEEecCCCeEEEEEEc-------C-----CC---HHHHHHHHHHHHH
Confidence 99999999999999 44666 777622 2 12 3456677766654
No 258
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.43 E-value=3.8e-13 Score=113.63 Aligned_cols=71 Identities=24% Similarity=0.585 Sum_probs=63.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.++++||+||++||++|+.+.|.|.+++++++++ +.++.|++|.+. .+++.|+|
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~---v~~~~vd~d~~~-----------------------~l~~~~~v 83 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK---VVMAKVDIDDHT-----------------------DLAIEYEV 83 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---SEEEEEETTTTH-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCCCCH-----------------------HHHHHcCC
Confidence 3789999999999999999999999999888654 899999988654 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 84 ~~~Pt~~~~-~~G~~~~~ 100 (119)
T 1w4v_A 84 SAVPTVLAM-KNGDVVDK 100 (119)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCcEEEE
Confidence 999999999 89999876
No 259
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.43 E-value=5.7e-13 Score=117.31 Aligned_cols=70 Identities=20% Similarity=0.308 Sum_probs=61.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++|||+|||+||++|+.+.|.|.+++++++++ +.++.|++|..+ .+++.|+|
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~---~~~~~vd~d~~~-----------------------~l~~~~~v 75 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM---AAIYLVDVDQTA-----------------------VYTQYFDI 75 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT---EEEEEEETTTCC-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCcCH-----------------------HHHHHcCC
Confidence 3899999999999999999999999999888654 889999988664 58999999
Q ss_pred CCcceEEEECCCCcEEE
Q 008845 418 SGIPMLVAIGPSGRTIT 434 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~ 434 (551)
.++||++++ ++|+++.
T Consensus 76 ~~~Pt~~~~-~~G~~v~ 91 (149)
T 3gix_A 76 SYIPSTVFF-FNGQHMK 91 (149)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CccCeEEEE-ECCeEEE
Confidence 999999955 7899883
No 260
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.43 E-value=1.4e-12 Score=111.44 Aligned_cols=72 Identities=13% Similarity=0.232 Sum_probs=61.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc--CCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER--NESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
.+++++|+|||+||++|+.+.|.|.++++.+... ..++.++.|++|... .+++.|
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~-----------------------~l~~~~ 88 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP-----------------------DVIERM 88 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH-----------------------HHHHHT
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH-----------------------hHHHhc
Confidence 3899999999999999999999999999988632 245888888887654 689999
Q ss_pred CCCCcceEEEECCCCcE
Q 008845 416 KVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 416 ~v~~~P~~~lid~~G~i 432 (551)
+|+++||++++++++++
T Consensus 89 ~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 89 RVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp TCCSSSEEEEECSSCSS
T ss_pred CCccCCEEEEEeCCCCC
Confidence 99999999999776663
No 261
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.43 E-value=4e-13 Score=115.11 Aligned_cols=71 Identities=27% Similarity=0.533 Sum_probs=63.7
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|++++++++++ +.++.|++|.++ .+++.|+|
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v 92 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK---LTVAKLNIDQNP-----------------------GTAPKYGI 92 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT---EEEEEEETTTCC-----------------------TTSGGGTC
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCCH-----------------------HHHHHcCC
Confidence 4899999999999999999999999999988754 899999988664 47889999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 93 ~~~Pt~~~~-~~G~~~~~ 109 (128)
T 2o8v_B 93 RGIPTLLLF-KNGEVAAT 109 (128)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CccCEEEEE-eCCEEEEE
Confidence 999999999 89999876
No 262
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.43 E-value=3.9e-12 Score=121.82 Aligned_cols=192 Identities=12% Similarity=0.095 Sum_probs=112.5
Q ss_pred CCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcCc
Q 008845 178 EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFEL 257 (551)
Q Consensus 178 ~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~v 257 (551)
.++.++++|+++||++|+.+.|.+.++++.+.+.+..+.++.++++.+. ...+++.|+|
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~---------------------~~~l~~~~~v 87 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET---------------------NSAVCRDFNI 87 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT---------------------THHHHHHTTC
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh---------------------hHHHHHHcCC
Confidence 4589999999999999999999999999999874445666666665443 5688999999
Q ss_pred CCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCeee--cc
Q 008845 258 STLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKVP--VS 335 (551)
Q Consensus 258 ~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v~--l~ 335 (551)
.++||+++++.+++.-... .+ .++ ..+.+.+.+++......... +.. ...|.+... +...+. +.
T Consensus 88 ~~~Pt~~~~~~g~~~~~g~---~~-~~~----g~~~~~l~~~i~~~l~~~~~----~~p-~~~p~l~~~-~~~~l~~~~~ 153 (244)
T 3q6o_A 88 PGFPTVRFFXAFTXNGSGA---VF-PVA----GADVQTLRERLIDALESHHD----TWP-PACPPLEPA-XLEEIDGFFA 153 (244)
T ss_dssp CSSSEEEEECTTCCSSSCE---EC-CCT----TCCHHHHHHHHHHHHHTCTT----SCC-TTSCCCSCC-CHHHHHTHHH
T ss_pred CccCEEEEEeCCCcCCCCe---eE-ecC----CCCHHHHHHHHHHHHHhccc----cCC-CCCCCcccc-cHHHHHHHhh
Confidence 9999999998643321100 00 111 12456666665543321110 000 000111110 000000 01
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 336 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 336 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
.-..+++.+.|....|..++.. ...+... ..+.+..+. +....+++.|
T Consensus 154 ~~~~~~~al~f~~~~~~~~~~~-------~~d~~~~-~~i~v~~~~------------------------~~~~~l~~~f 201 (244)
T 3q6o_A 154 RNNEEYLALIFEXGGSYLAREV-------ALDLSQH-KGVAVRRVL------------------------NTEANVVRKF 201 (244)
T ss_dssp HCCCSEEEEEEECTTCCHHHHH-------HHHTTTC-TTEEEEEEE------------------------TTCHHHHHHH
T ss_pred cCCCceEEEEEEECCcchHHHH-------HHHhccC-CceEEEEEe------------------------CchHHHHHHc
Confidence 1124566666666544332222 2222211 124443332 2224699999
Q ss_pred CCCCcceEEEECCCCcEEEcc
Q 008845 416 KVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 416 ~v~~~P~~~lid~~G~i~~~~ 436 (551)
+|+++|++++++++|++...+
T Consensus 202 ~v~~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 202 GVTDFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp TCCCSSEEEEEETTSCEEECC
T ss_pred CCCCCCeEEEEeCCCCeEeec
Confidence 999999999999999998875
No 263
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.42 E-value=7.3e-13 Score=115.60 Aligned_cols=71 Identities=11% Similarity=0.274 Sum_probs=62.9
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++|+|+|||+||++|+.+.|.|++++++++++ +.++.|++|..+ .+++.|+|+
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~~-----------------------~~~~~~~i~ 76 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---AVIYLVDITEVP-----------------------DFNKMYELY 76 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTCC-----------------------TTTTSSCSC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---eEEEEEccccCH-----------------------HHHHHcCCC
Confidence 799999999999999999999999999998654 899999988664 478999999
Q ss_pred CcceEEEECCCCcEEEcc
Q 008845 419 GIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~~ 436 (551)
++||++++ ++|+++...
T Consensus 77 ~~Pt~~~~-~~G~~v~~~ 93 (142)
T 1qgv_A 77 DPCTVMFF-FRNKHIMID 93 (142)
T ss_dssp SSCEEEEE-ETTEEEEEE
T ss_pred CCCEEEEE-ECCcEEEEe
Confidence 99999999 588888753
No 264
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.42 E-value=3.3e-13 Score=110.93 Aligned_cols=70 Identities=21% Similarity=0.467 Sum_probs=62.4
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.|++|..+ .+++.|+|
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~-----------------------~~~~~~~v 71 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS----NVIFLEVDVDDCQ-----------------------DVASESEV 71 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc----CeEEEEEEhhhhH-----------------------HHHHHcCC
Confidence 58999999999999999999999999988875 3788889887664 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 72 ~~~Pt~~~~-~~g~~~~~ 88 (105)
T 3m9j_A 72 KSMPTFQFF-KKGQKVGE 88 (105)
T ss_dssp CBSSEEEEE-ETTEEEEE
T ss_pred CcCcEEEEE-ECCeEEEE
Confidence 999999999 78988876
No 265
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.7e-12 Score=127.90 Aligned_cols=69 Identities=23% Similarity=0.466 Sum_probs=59.3
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+|||+||++|+.++|.|.++++.+.. .+.++.|++|.+.. ..+++.|+|
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d~~~~----------------------~~l~~~~~I 89 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCDLNKN----------------------KALCAKYDV 89 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTSTTT----------------------HHHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEEEEccCccC----------------------HHHHHhCCC
Confidence 467 99999999999999999999999999975 47899999985433 469999999
Q ss_pred CCCcEEEEEcCCCeE
Q 008845 98 MGIPHLVILDENGKV 112 (551)
Q Consensus 98 ~~~P~~~lid~~G~i 112 (551)
.++|++++++ +|++
T Consensus 90 ~~~Pt~~~~~-~g~~ 103 (298)
T 3ed3_A 90 NGFPTLMVFR-PPKI 103 (298)
T ss_dssp CBSSEEEEEE-CCCC
T ss_pred CccceEEEEE-CCce
Confidence 9999999995 4553
No 266
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.42 E-value=2.6e-13 Score=122.48 Aligned_cols=100 Identities=15% Similarity=0.240 Sum_probs=82.6
Q ss_pred ceeecccC-CCc--EEEEEecCCCHhhHhh-hHHHHHHHHHhcCCCCEE-EEEEeCCCCHHHHHHHHhhCCC--CccccC
Q 008845 11 LRVKLDSL-KGK--IGLYFSASWCGPCQRF-TPILAEVYNELSRQGDFE-VIFVSGDEDDEAFKGYFSKMPW--LAVPFS 83 (551)
Q Consensus 11 ~~v~l~~~-~gk--vlv~F~a~wC~~C~~~-~p~l~~~~~~~~~~~~~~-vv~v~~d~~~~~~~~~~~~~~~--~~~~~~ 83 (551)
+.++++++ +|| ||++||++||++|+.+ +|.|+++++++++.+ +. |++|+.| +.+..++|.++++. .+..+.
T Consensus 33 ~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g-~~~vv~Is~d-~~~~~~~~~~~~~~~~~fp~l~ 110 (171)
T 2pwj_A 33 STTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG-VDSVICVAIN-DPYTVNAWAEKIQAKDAIEFYG 110 (171)
T ss_dssp CCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT-CSEEEEEESS-CHHHHHHHHHHTTCTTTSEEEE
T ss_pred ceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCC-CHHHHHHHHHHhCCCCceEEEE
Confidence 89999996 996 6678999999999999 999999999998774 88 9999997 56788999999886 233355
Q ss_pred ChhhHHHHHhhcCCCC-----------CcEEEEEcCCCeEEEc
Q 008845 84 DSETRDKLDELFKVMG-----------IPHLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~~-----------~P~~~lid~~G~i~~~ 115 (551)
|.+ ..+.+.|++.. .|++++|| +|+|+..
T Consensus 111 D~~--~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~ 150 (171)
T 2pwj_A 111 DFD--GSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKAL 150 (171)
T ss_dssp CTT--CHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEE
T ss_pred CCc--cHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEE
Confidence 554 46889999853 56889998 9999985
No 267
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.41 E-value=8.9e-13 Score=109.51 Aligned_cols=70 Identities=23% Similarity=0.505 Sum_probs=63.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+||++||++|+.+.|.+.+++++++++ +.++.|++|..+ .+++.|+|.
T Consensus 22 ~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v~ 75 (111)
T 3gnj_A 22 GKACLVMFSRKNCHVCQKVTPVLEELRLNYEES---FGFYYVDVEEEK-----------------------TLFQRFSLK 75 (111)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc---eEEEEEECCcCh-----------------------hHHHhcCCC
Confidence 789999999999999999999999999998754 899999998765 589999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 76 ~~Pt~~~~-~~g~~~~~ 91 (111)
T 3gnj_A 76 GVPQILYF-KDGEYKGK 91 (111)
T ss_dssp SSCEEEEE-ETTEEEEE
T ss_pred cCCEEEEE-ECCEEEEE
Confidence 99999999 78988866
No 268
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.41 E-value=6.7e-13 Score=113.84 Aligned_cols=72 Identities=25% Similarity=0.499 Sum_probs=62.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.++++++++. +.++.|++|... .+++.|+|
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~-----------------------~l~~~~~v 87 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV---VKVGAVNADKHQ-----------------------SLGGQYGV 87 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT---SEEEEEETTTCH-----------------------HHHHHHTC
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc---eEEEEEeCCCCH-----------------------HHHHHcCC
Confidence 3789999999999999999999999999988754 888888887664 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|++++++++|+++.+
T Consensus 88 ~~~Pt~~~~~~~~~~~~~ 105 (130)
T 2dml_A 88 QGFPTIKIFGANKNKPED 105 (130)
T ss_dssp CSSSEEEEESSCTTSCEE
T ss_pred CccCEEEEEeCCCCeEEE
Confidence 999999999988874443
No 269
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.41 E-value=5.5e-13 Score=118.05 Aligned_cols=89 Identities=18% Similarity=0.380 Sum_probs=72.7
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
+++++||+||++||++|+.+.|.|.+++++++ ++.++.|++|..+ .+++.|+|
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~~-----------------------~l~~~~~v 83 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGVP-----------------------EVSEKYEI 83 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSH-----------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999988863 4899999988664 58999999
Q ss_pred CCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhcc
Q 008845 418 SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 469 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~ 469 (551)
+++|++++++ +|+++.+.. | ... ++|.+.|++++..
T Consensus 84 ~~~Pt~~~~~-~G~~~~~~~-------G-----~~~---~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 84 SSVPTFLFFK-NSQKIDRLD-------G-----AHA---PELTKKVQRHASS 119 (153)
T ss_dssp CSSSEEEEEE-TTEEEEEEE-------S-----SCH---HHHHHHHHHHSCT
T ss_pred CCCCEEEEEE-CCEEEEEEe-------C-----CCH---HHHHHHHHHHhcc
Confidence 9999999998 999987632 2 122 4567777777654
No 270
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.41 E-value=9.3e-13 Score=116.80 Aligned_cols=71 Identities=23% Similarity=0.593 Sum_probs=64.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.++++||+||++||++|+.+.|.|++++++++++ +.++.|++|..+ .+++.|+|
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~i 116 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ---VRLAKIDTQAHP-----------------------AVAGRHRI 116 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTST-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC---EEEEEEeCCccH-----------------------HHHHHcCC
Confidence 4789999999999999999999999999999764 899999988664 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|+++++ ++|+++.+
T Consensus 117 ~~~Pt~~~~-~~G~~~~~ 133 (155)
T 2ppt_A 117 QGIPAFILF-HKGRELAR 133 (155)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcCCEEEEE-eCCeEEEE
Confidence 999999999 79999876
No 271
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.41 E-value=5e-13 Score=115.19 Aligned_cols=98 Identities=20% Similarity=0.344 Sum_probs=73.5
Q ss_pred cccCCCc-EEEEEecCCCHhhHhhhHHHH--HHHHHhcCCCCEEEEEEeCC---CCHHHHHHHHhhCCCCccccCChhhH
Q 008845 15 LDSLKGK-IGLYFSASWCGPCQRFTPILA--EVYNELSRQGDFEVIFVSGD---EDDEAFKGYFSKMPWLAVPFSDSETR 88 (551)
Q Consensus 15 l~~~~gk-vlv~F~a~wC~~C~~~~p~l~--~~~~~~~~~~~~~vv~v~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (551)
.+...|| ++|+||++||++|+.+.|.|. ++++.++. ++.++.|+++ ..
T Consensus 24 ~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~------------------------ 77 (133)
T 3fk8_A 24 AGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRN------------------------ 77 (133)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSS------------------------
T ss_pred HHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccch------------------------
Confidence 3334688 999999999999999999999 99998864 4889999984 33
Q ss_pred HHHHhhcCC---CCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHH
Q 008845 89 DKLDELFKV---MGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQ 142 (551)
Q Consensus 89 ~~l~~~~~v---~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 142 (551)
..+++.|+| .++|+++++|++|+++.+.....+... ...+.+.+.++++.
T Consensus 78 ~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~----~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 78 LELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANA----RKMSDQGIYDFFAK 130 (133)
T ss_dssp HHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTG----GGSCHHHHHHHHHH
T ss_pred HHHHHHhCCccCCccceEEEECCCCCEEEEecCCccccc----ccCCHHHHHHHHHH
Confidence 358999999 999999999999999986332111111 11345666666543
No 272
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.40 E-value=8e-13 Score=108.76 Aligned_cols=71 Identities=25% Similarity=0.646 Sum_probs=62.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
++++++|+||++||++|+.+.|.+.+++++++. ++.++.|++|..+ .+++.|++
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~-----------------------~~~~~~~v 72 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFAD---NVVVLKVDVDECE-----------------------DIAMEYNI 72 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC---CeEEEEEeccchH-----------------------HHHHHcCC
Confidence 489999999999999999999999999988864 4899999988654 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 73 ~~~Pt~~~~-~~G~~~~~ 89 (106)
T 1xwb_A 73 SSMPTFVFL-KNGVKVEE 89 (106)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-cCCcEEEE
Confidence 999998888 78998876
No 273
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.40 E-value=1.1e-12 Score=109.57 Aligned_cols=71 Identities=31% Similarity=0.630 Sum_probs=64.3
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.++++.++++ +.++.|++|.++ .+++.|+|
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~~-----------------------~~~~~~~v 77 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR---LKVVKLEIDPNP-----------------------TTVKKYKV 77 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEESTTCH-----------------------HHHHHTTC
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc---EEEEEEEcCCCH-----------------------HHHHHcCC
Confidence 4799999999999999999999999999988754 899999998764 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 78 ~~~Pt~~~~-~~G~~~~~ 94 (115)
T 1thx_A 78 EGVPALRLV-KGEQILDS 94 (115)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CceeEEEEE-cCCEEEEE
Confidence 999999999 89999876
No 274
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.40 E-value=6e-13 Score=114.95 Aligned_cols=78 Identities=26% Similarity=0.471 Sum_probs=65.6
Q ss_pred eecccCCCc-EEEEEecCCCHhhHhhhHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhH
Q 008845 13 VKLDSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETR 88 (551)
Q Consensus 13 v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (551)
..+++.+|| ++|+||++||++|+.+.|.+ .++++.++ ++.++.|+++...+ ..
T Consensus 24 ~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~~~--------------------~~ 80 (134)
T 2fwh_A 24 QALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTANDA--------------------QD 80 (134)
T ss_dssp HHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTCCH--------------------HH
T ss_pred HHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCCcc--------------------hH
Confidence 345666799 99999999999999999999 88988886 38899998875321 12
Q ss_pred HHHHhhcCCCCCcEEEEEcCCCeEE
Q 008845 89 DKLDELFKVMGIPHLVILDENGKVL 113 (551)
Q Consensus 89 ~~l~~~~~v~~~P~~~lid~~G~i~ 113 (551)
..+++.|+|.++|+++++|++|+++
T Consensus 81 ~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 81 VALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp HHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEe
Confidence 5689999999999999999999887
No 275
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.40 E-value=6.6e-13 Score=113.18 Aligned_cols=70 Identities=17% Similarity=0.459 Sum_probs=62.3
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.++++||+||++||++|+.+.|.|.+++++++ ++.++.|++|..+ .+++.|+|
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~-----------------------~l~~~~~v 88 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADNNS-----------------------EIVSKCRV 88 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCH-----------------------HHHHHcCC
Confidence 38999999999999999999999999988873 4899999998664 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 89 ~~~Pt~~i~-~~G~~~~~ 105 (125)
T 1r26_A 89 LQLPTFIIA-RSGKMLGH 105 (125)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCeEEEE
Confidence 999998888 89998876
No 276
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.40 E-value=3.8e-13 Score=113.15 Aligned_cols=72 Identities=25% Similarity=0.562 Sum_probs=62.1
Q ss_pred ccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 335 SDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 335 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
++.++++++|+||++||++|+.+.|.++++++++ ++.++.|++|... .+++.
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~~~-----------------------~~~~~ 80 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDKLE-----------------------ETARK 80 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTTSH-----------------------HHHHH
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCccH-----------------------HHHHH
Confidence 3345899999999999999999999999887776 3788888887654 58999
Q ss_pred cCCCCcceEEEECCCCcEEEc
Q 008845 415 FKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 415 ~~v~~~P~~~lid~~G~i~~~ 435 (551)
|+|+++|+++++ ++|+++.+
T Consensus 81 ~~v~~~Pt~~~~-~~G~~~~~ 100 (117)
T 2xc2_A 81 YNISAMPTFIAI-KNGEKVGD 100 (117)
T ss_dssp TTCCSSSEEEEE-ETTEEEEE
T ss_pred cCCCccceEEEE-eCCcEEEE
Confidence 999999998888 79999876
No 277
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.40 E-value=1.8e-13 Score=122.41 Aligned_cols=75 Identities=20% Similarity=0.289 Sum_probs=62.3
Q ss_pred ecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHH
Q 008845 14 KLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLD 92 (551)
Q Consensus 14 ~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (551)
.+++++|+ ++|+|||+|||+|+.++|.|.++++.++ ++.++.|++|.+. .+.
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~------------------------~~~ 100 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAE------------------------DDL 100 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHH------------------------HHT
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCH------------------------HHH
Confidence 35677899 9999999999999999999999998764 5888888776432 355
Q ss_pred hhcC---CCCCcEEEEEcCCCeEEEc
Q 008845 93 ELFK---VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 93 ~~~~---v~~~P~~~lid~~G~i~~~ 115 (551)
..|. +.++||++++|.+|+++.+
T Consensus 101 ~~~~~~~v~~iPt~i~~~~~G~~~~~ 126 (167)
T 1z6n_A 101 RQRLALERIAIPLVLVLDEEFNLLGR 126 (167)
T ss_dssp TTTTTCSSCCSSEEEEECTTCCEEEE
T ss_pred HHHHHcCCCCcCeEEEECCCCCEEEE
Confidence 6665 9999999999988888764
No 278
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=2.9e-12 Score=110.23 Aligned_cols=73 Identities=19% Similarity=0.488 Sum_probs=62.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER-NESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
++++||+||++||++|+.+.|.|.+++++++.. ..++.++.|+++... .+++.|+|
T Consensus 25 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-----------------------~l~~~~~v 81 (133)
T 1x5d_A 25 EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ-----------------------VLASRYGI 81 (133)
T ss_dssp SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC-----------------------HHHHHHTC
T ss_pred CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH-----------------------HHHHhCCC
Confidence 789999999999999999999999999999731 124888888887653 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|+++++++ |+++.+
T Consensus 82 ~~~Pt~~~~~~-g~~~~~ 98 (133)
T 1x5d_A 82 RGFPTIKIFQK-GESPVD 98 (133)
T ss_dssp CSSSEEEEEET-TEEEEE
T ss_pred CeeCeEEEEeC-CCceEE
Confidence 99999999976 877665
No 279
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.39 E-value=2.2e-13 Score=118.96 Aligned_cols=85 Identities=11% Similarity=0.214 Sum_probs=68.9
Q ss_pred ceecccCceeecccC--CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCcc
Q 008845 4 MKIYELLLRVKLDSL--KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAV 80 (551)
Q Consensus 4 ~~~~~~~~~v~l~~~--~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~ 80 (551)
+..+.+++.+...-. .++ ++|+|||+||++|+.+.|.|.+++++++. ++.++.|+++...+
T Consensus 5 l~~i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~-------------- 68 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPD-------------- 68 (142)
T ss_dssp SCBCCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCT--------------
T ss_pred HhccCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHH--------------
Confidence 455666666653222 478 99999999999999999999999999864 58899999886543
Q ss_pred ccCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 81 PFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+++.|+|.++|+++++ ++|+++..
T Consensus 69 ----------~~~~~~i~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 69 ----------FNKMYELYDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp ----------TTTSSCSCSSCEEEEE-ETTEEEEE
T ss_pred ----------HHHHcCCCCCCEEEEE-ECCcEEEE
Confidence 7789999999999999 68888763
No 280
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.39 E-value=6.6e-13 Score=110.25 Aligned_cols=75 Identities=23% Similarity=0.511 Sum_probs=63.3
Q ss_pred eecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHH
Q 008845 13 VKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKL 91 (551)
Q Consensus 13 v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (551)
+...-.+++ ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++... .+
T Consensus 17 f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~---~~~~~~vd~~~~~------------------------~l 69 (109)
T 3f3q_A 17 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP---QADFYKLDVDELG------------------------DV 69 (109)
T ss_dssp HHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HH
T ss_pred HHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCH------------------------HH
Confidence 333333588 9999999999999999999999999986 4788899888664 48
Q ss_pred HhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 92 DELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 92 ~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
++.|+|.++|++++++ +|+++.+
T Consensus 70 ~~~~~v~~~Pt~~~~~-~G~~~~~ 92 (109)
T 3f3q_A 70 AQKNEVSAMPTLLLFK-NGKEVAK 92 (109)
T ss_dssp HHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred HHHcCCCccCEEEEEE-CCEEEEE
Confidence 8999999999999996 8988764
No 281
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.39 E-value=3.8e-13 Score=113.97 Aligned_cols=68 Identities=18% Similarity=0.317 Sum_probs=60.9
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+||++||++|+.+.|.|.+++++++++ +.++.|+++..+ .+++.|+|+
T Consensus 21 ~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~-----------------------~~~~~~~v~ 74 (122)
T 3aps_A 21 KTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK---VRAGKVDCQAYP-----------------------QTCQKAGIK 74 (122)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCcCCH-----------------------HHHHHcCCC
Confidence 789999999999999999999999999998764 899999888664 588999999
Q ss_pred CcceEEEECCCCcE
Q 008845 419 GIPMLVAIGPSGRT 432 (551)
Q Consensus 419 ~~P~~~lid~~G~i 432 (551)
++|++++++++|++
T Consensus 75 ~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 75 AYPSVKLYQYERAK 88 (122)
T ss_dssp SSSEEEEEEEEGGG
T ss_pred ccceEEEEeCCCcc
Confidence 99999999877763
No 282
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.39 E-value=2.3e-12 Score=106.20 Aligned_cols=71 Identities=28% Similarity=0.568 Sum_probs=64.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|+++..+ .+++.|+|
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 72 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGK---VTVAKVNIDDNP-----------------------ETPNAYQV 72 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTS---EEEEEEETTTCC-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCc---EEEEEEECCCCH-----------------------HHHHhcCC
Confidence 4799999999999999999999999999998754 899999988654 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 73 ~~~Pt~~~~-~~G~~~~~ 89 (107)
T 2i4a_A 73 RSIPTLMLV-RDGKVIDK 89 (107)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CccCEEEEE-eCCEEEEE
Confidence 999999999 89999876
No 283
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=1.9e-12 Score=110.43 Aligned_cols=68 Identities=18% Similarity=0.420 Sum_probs=59.6
Q ss_pred CEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCC
Q 008845 340 KTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSG 419 (551)
Q Consensus 340 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~ 419 (551)
+.++|+||++||++|+.+.|.|.++++++++. ++.++.|++|... .+++.|+|++
T Consensus 23 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~v~~~~vd~~~~~-----------------------~~~~~~~v~~ 77 (126)
T 1x5e_A 23 GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL--EVNIAKVDVTEQP-----------------------GLSGRFIINA 77 (126)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEETTTCH-----------------------HHHHHTTCCS
T ss_pred CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC--CeEEEEEECcCCH-----------------------HHHHHcCCcc
Confidence 35999999999999999999999999998753 4889999888664 5899999999
Q ss_pred cceEEEECCCCcEE
Q 008845 420 IPMLVAIGPSGRTI 433 (551)
Q Consensus 420 ~P~~~lid~~G~i~ 433 (551)
+|+++++ ++|++.
T Consensus 78 ~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 78 LPTIYHC-KDGEFR 90 (126)
T ss_dssp SSEEEEE-ETTEEE
T ss_pred cCEEEEE-eCCeEE
Confidence 9999999 889863
No 284
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.39 E-value=4e-13 Score=118.31 Aligned_cols=84 Identities=20% Similarity=0.252 Sum_probs=67.9
Q ss_pred ceecccCceeeccc--CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCcc
Q 008845 4 MKIYELLLRVKLDS--LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAV 80 (551)
Q Consensus 4 ~~~~~~~~~v~l~~--~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~ 80 (551)
|..+.+++.+...- -.++ ++|+|||+||++|+.++|.|.++++++++ .+.++.|++|...
T Consensus 5 l~~i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~--------------- 67 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTA--------------- 67 (149)
T ss_dssp CCEECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCC---------------
T ss_pred eeecCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCH---------------
Confidence 44555555554433 3578 99999999999999999999999998864 4889999988664
Q ss_pred ccCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEE
Q 008845 81 PFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 114 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 114 (551)
.+++.|+|.++|+++++ ++|+++.
T Consensus 68 ---------~l~~~~~v~~~Pt~~~~-~~G~~v~ 91 (149)
T 3gix_A 68 ---------VYTQYFDISYIPSTVFF-FNGQHMK 91 (149)
T ss_dssp ---------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ---------HHHHHcCCCccCeEEEE-ECCeEEE
Confidence 48899999999999965 7898883
No 285
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.38 E-value=8.2e-13 Score=112.32 Aligned_cols=73 Identities=15% Similarity=0.445 Sum_probs=61.3
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 336 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 336 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
+.++|+++|+||++||++|+.+.|.+.+++++++ ++.++.|+++... ..+++.|
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~~~~~~vd~~~~~----------------------~~~~~~~ 87 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL----DVIFLKLDCNQEN----------------------KTLAKEL 87 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSTT----------------------HHHHHHH
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC----CCEEEEEecCcch----------------------HHHHHHc
Confidence 3458999999999999999999999999988875 3788888886321 3688999
Q ss_pred CCCCcceEEEECCCCcEEEc
Q 008845 416 KVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 416 ~v~~~P~~~lid~~G~i~~~ 435 (551)
+|+++||++++ ++|+++.+
T Consensus 88 ~v~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1faa_A 88 GIRVVPTFKIL-KENSVVGE 106 (124)
T ss_dssp CCSSSSEEEEE-ETTEEEEE
T ss_pred CCCeeeEEEEE-eCCcEEEE
Confidence 99999997766 89999876
No 286
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.38 E-value=6.5e-13 Score=110.49 Aligned_cols=86 Identities=15% Similarity=0.234 Sum_probs=69.2
Q ss_pred CccceecccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCc
Q 008845 1 MEIMKIYELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLA 79 (551)
Q Consensus 1 ~~~~~~~~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~ 79 (551)
|+.+..+.+.+.+ ..-..++ ++|+||++||++|+.+.|.|.++++.+. ++.++.|+++...
T Consensus 1 M~~~~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~-------------- 62 (110)
T 2l6c_A 1 MSAIRDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARP-------------- 62 (110)
T ss_dssp CCCCSBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCH--------------
T ss_pred CcceeecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCH--------------
Confidence 6666665556666 3333567 9999999999999999999999988875 4778888887553
Q ss_pred cccCChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.+++.|++.++|+++++ ++|+++.+
T Consensus 63 ----------~l~~~~~v~~~Pt~~~~-~~G~~v~~ 87 (110)
T 2l6c_A 63 ----------ELMKELGFERVPTLVFI-RDGKVAKV 87 (110)
T ss_dssp ----------HHHHHTTCCSSCEEEEE-ESSSEEEE
T ss_pred ----------HHHHHcCCcccCEEEEE-ECCEEEEE
Confidence 48899999999999999 89998763
No 287
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.38 E-value=7.9e-13 Score=111.11 Aligned_cols=72 Identities=22% Similarity=0.496 Sum_probs=62.4
Q ss_pred ccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 16 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
++.+++ ++|+|||+||++|+.+.|.|.+++++++ ++.++.|+++... .+++.
T Consensus 27 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~------------------------~l~~~ 79 (116)
T 3qfa_C 27 DAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS---NVIFLEVDVDDCQ------------------------DVASE 79 (116)
T ss_dssp HHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT---TSEEEEEETTTTH------------------------HHHHH
T ss_pred HhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEECCCCH------------------------HHHHH
Confidence 334688 9999999999999999999999999886 3888999988654 48899
Q ss_pred cCCCCCcEEEEEcCCCeEEEc
Q 008845 95 FKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~i~~~ 115 (551)
|+|.++|+++++ ++|+++.+
T Consensus 80 ~~v~~~Pt~~~~-~~G~~~~~ 99 (116)
T 3qfa_C 80 CEVKSMPTFQFF-KKGQKVGE 99 (116)
T ss_dssp TTCCSSSEEEEE-SSSSEEEE
T ss_pred cCCccccEEEEE-eCCeEEEE
Confidence 999999999999 88988764
No 288
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.38 E-value=1.3e-12 Score=110.62 Aligned_cols=70 Identities=26% Similarity=0.574 Sum_probs=61.7
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.++++++++ +.++.|++|..+ .+++.|+|
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~-----------------------~~~~~~~v 85 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDELK-----------------------PIAEQFSV 85 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCCCH-----------------------HHHHHcCC
Confidence 378999999999999999999999998888753 788999888654 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|+++++ ++|+++.+
T Consensus 86 ~~~Pt~~~~-~~G~~~~~ 102 (122)
T 2vlu_A 86 EAMPTFLFM-KEGDVKDR 102 (122)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCEEEEE
Confidence 999998888 89999876
No 289
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.38 E-value=1.2e-12 Score=107.30 Aligned_cols=70 Identities=30% Similarity=0.674 Sum_probs=61.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|..+ .+++.|+|
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~-----------------------~~~~~~~v 70 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQNE-----------------------EAAAKYSV 70 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccCCH-----------------------HHHHHcCC
Confidence 58999999999999999999999999888875 4899999988654 58899999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 71 ~~~Pt~~~~-~~g~~~~~ 87 (104)
T 2vim_A 71 TAMPTFVFI-KDGKEVDR 87 (104)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred ccccEEEEE-eCCcEEEE
Confidence 999999888 58998876
No 290
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.38 E-value=1.5e-12 Score=113.32 Aligned_cols=70 Identities=21% Similarity=0.339 Sum_probs=63.7
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
++++||+||++||++|+.+.|.|.+++++++++ +.++.|++|..+ .+++.|+|+
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v~ 77 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS---AVFGRINIATNP-----------------------WTAEKYGVQ 77 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTCH-----------------------HHHHHHTCC
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc---eEEEEEECCcCH-----------------------hHHHHCCCC
Confidence 799999999999999999999999999999764 899999988765 589999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 78 ~~Pt~~~~-~~G~~~~~ 93 (140)
T 3hz4_A 78 GTPTFKFF-CHGRPVWE 93 (140)
T ss_dssp EESEEEEE-ETTEEEEE
T ss_pred cCCEEEEE-eCCcEEEE
Confidence 99999999 78998876
No 291
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.37 E-value=1.1e-12 Score=109.92 Aligned_cols=69 Identities=23% Similarity=0.547 Sum_probs=61.5
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
||+++|+||++||++|+.+.|.|.++++++++ +.++.|++|.++ .+++.|+|+
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~----v~~~~vd~~~~~-----------------------~l~~~~~v~ 82 (114)
T 2oe3_A 30 NDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD----VRFVKCDVDESP-----------------------DIAKECEVT 82 (114)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT----SEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCH-----------------------HHHHHCCCC
Confidence 89999999999999999999999998888753 788999888664 589999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 83 ~~Pt~~~~-~~G~~~~~ 98 (114)
T 2oe3_A 83 AMPTFVLG-KDGQLIGK 98 (114)
T ss_dssp SBSEEEEE-ETTEEEEE
T ss_pred cccEEEEE-eCCeEEEE
Confidence 99999888 89999876
No 292
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.37 E-value=9.2e-13 Score=112.17 Aligned_cols=69 Identities=20% Similarity=0.324 Sum_probs=61.9
Q ss_pred Cc-EEEEEecCCC--HhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 20 GK-IGLYFSASWC--GPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 20 gk-vlv~F~a~wC--~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
++ +||+|||+|| ++|+.+.|.|.++++++.. ++.++.|++|.+. .++.+|+
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~------------------------~la~~yg 86 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAER------------------------GLMARFG 86 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHH------------------------HHHHHHT
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCH------------------------HHHHHcC
Confidence 45 9999999999 9999999999999999964 5899999888654 4999999
Q ss_pred CCCCcEEEEEcCCCeEEEc
Q 008845 97 VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~~ 115 (551)
|+++||+++| ++|+++.+
T Consensus 87 V~siPTlilF-kdG~~v~~ 104 (137)
T 2qsi_A 87 VAVCPSLAVV-QPERTLGV 104 (137)
T ss_dssp CCSSSEEEEE-ECCEEEEE
T ss_pred CccCCEEEEE-ECCEEEEE
Confidence 9999999999 89999975
No 293
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.37 E-value=1.6e-12 Score=122.90 Aligned_cols=102 Identities=11% Similarity=0.116 Sum_probs=83.7
Q ss_pred cCceeecccCCCc--EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHh------hC--CC
Q 008845 9 LLLRVKLDSLKGK--IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFS------KM--PW 77 (551)
Q Consensus 9 ~~~~v~l~~~~gk--vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~------~~--~~ 77 (551)
.| .+++++++|+ +||+|| ++||++|..++|.|+++++++++. +++|++|++|. .+..++|++ +. ++
T Consensus 18 ~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~-~v~vigIS~D~-~~~~~~~~~~i~~~~~~~~~~ 94 (233)
T 2v2g_A 18 IG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR-GVKLIALSCDN-VADHKEWSEDVKCLSGVKGDM 94 (233)
T ss_dssp TC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSC-HHHHHHHHHHHHHHHTCCSSC
T ss_pred CC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc-CCEEEEEcCCC-HHHHHHHHHHHHHhhCcccCC
Confidence 46 8999999887 888888 999999999999999999999876 49999999984 566677776 45 44
Q ss_pred CccccCChhhHHHHHhhcCCC------------CCcEEEEEcCCCeEEEc
Q 008845 78 LAVPFSDSETRDKLDELFKVM------------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 78 ~~~~~~~~~~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~ 115 (551)
.+..+.|.. ..+++.|++. .+|+++|||++|+|+..
T Consensus 95 ~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 142 (233)
T 2v2g_A 95 PYPIIADET--RELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLS 142 (233)
T ss_dssp SSCEEECTT--CHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEE
T ss_pred ceEEEECCh--HHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEE
Confidence 444455544 4688999985 57999999999999985
No 294
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.37 E-value=7.9e-13 Score=111.50 Aligned_cols=70 Identities=21% Similarity=0.423 Sum_probs=62.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
++++||+||++||++|+.+.|.|.++++++ . ++.++.|++|... .+++.|+|.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~---~v~~~~vd~~~~~-----------------------~~~~~~~i~ 75 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEAN-K---DVTFIKVDVDKNG-----------------------NAADAYGVS 75 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T---TSEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C---CeEEEEEECCCCH-----------------------HHHHhcCCC
Confidence 789999999999999999999999998887 3 4899999988764 589999999
Q ss_pred CcceEEEECC---CCcEEEc
Q 008845 419 GIPMLVAIGP---SGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~---~G~i~~~ 435 (551)
++|++++++. +|+++.+
T Consensus 76 ~~Pt~~~~~~~~~~G~~~~~ 95 (118)
T 2f51_A 76 SIPALFFVKKEGNEIKTLDQ 95 (118)
T ss_dssp SSSEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEeCCCCcceEEEe
Confidence 9999999965 3888877
No 295
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.37 E-value=3.8e-12 Score=119.91 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=81.0
Q ss_pred cCceeecccCCCc--E-EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhh----------C
Q 008845 9 LLLRVKLDSLKGK--I-GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSK----------M 75 (551)
Q Consensus 9 ~~~~v~l~~~~gk--v-lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~----------~ 75 (551)
+| .+++++++|+ + |++||++||++|..++|.|+++++++++. +++|++|++|. .+...+|++. .
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~IS~D~-~~~~~~~~~~i~~~~~~~~~~ 96 (224)
T 1prx_A 20 VG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKR-NVKLIALSIDS-VEDHLAWSKDINAYNSEEPTE 96 (224)
T ss_dssp TE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTT-TEEEEEEESSC-HHHHHHHHHHHHHHTTSCCCS
T ss_pred CC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEcCCC-HHHHHHHHHHHHHhhCccccc
Confidence 46 8999999886 4 44568999999999999999999999877 49999999984 5556667664 4
Q ss_pred CCCccccCChhhHHHHHhhcCCC------------CCcEEEEEcCCCeEEEc
Q 008845 76 PWLAVPFSDSETRDKLDELFKVM------------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 76 ~~~~~~~~~~~~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~ 115 (551)
+..+..+.|.. ..+++.|++. .+|+++|||++|+|+..
T Consensus 97 ~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 146 (224)
T 1prx_A 97 KLPFPIIDDRN--RELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLS 146 (224)
T ss_dssp CCSSCEEECTT--CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEE
T ss_pred CcCcceeecCc--hHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEE
Confidence 54444455544 4688999984 47999999999999985
No 296
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.36 E-value=3.9e-12 Score=104.37 Aligned_cols=72 Identities=18% Similarity=0.487 Sum_probs=63.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.+.+++++++++ +.++.|++|..+ .+++.|+|
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 70 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK---IAVYKLNTDEAP-----------------------GIATQYNI 70 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc---eEEEEEcCcchH-----------------------HHHHhCCC
Confidence 3789999999999999999999999999988754 889999888664 58999999
Q ss_pred CCcceEEEECCCCcEEEcc
Q 008845 418 SGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~ 436 (551)
.++|+++++ ++|+++.+.
T Consensus 71 ~~~Pt~~~~-~~g~~~~~~ 88 (105)
T 1fb6_A 71 RSIPTVLFF-KNGERKESI 88 (105)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCeEEEEE
Confidence 999999888 799998763
No 297
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.06 E-value=5.5e-14 Score=120.74 Aligned_cols=83 Identities=22% Similarity=0.518 Sum_probs=66.2
Q ss_pred CCeeecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCc
Q 008845 329 GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 405 (551)
Q Consensus 329 g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 405 (551)
.+.+.++...||++||+||++||++|+.+.|.+ .++.+.++.+ +.++.|+++.+.
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~------------------- 66 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR---FVVASVSVDTPE------------------- 66 (130)
Confidence 455666667799999999999999999999999 8887777643 677777765332
Q ss_pred hhhHHHHHhcCCCCcceEEEECC-CCcE--EEc
Q 008845 406 ARKASLSRKFKVSGIPMLVAIGP-SGRT--ITK 435 (551)
Q Consensus 406 d~~~~l~~~~~v~~~P~~~lid~-~G~i--~~~ 435 (551)
...+++.|+|.++|+++++|+ +|++ +.+
T Consensus 67 --~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~ 97 (130)
T 2lst_A 67 --GQELARRYRVPGTPTFVFLVPKAGAWEEVGR 97 (130)
Confidence 236889999999999999996 5888 665
No 298
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.36 E-value=2.7e-12 Score=106.03 Aligned_cols=70 Identities=26% Similarity=0.565 Sum_probs=63.3
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+. .+++.|++.
T Consensus 18 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v~ 71 (109)
T 2yzu_A 18 HPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK---LLVAKLDVDENP-----------------------KTAMRYRVM 71 (109)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc---eEEEEEECCCCH-----------------------hHHHhCCCC
Confidence 789999999999999999999999999988754 899999988664 589999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 72 ~~Pt~~~~-~~g~~~~~ 87 (109)
T 2yzu_A 72 SIPTVILF-KDGQPVEV 87 (109)
T ss_dssp SSSEEEEE-ETTEEEEE
T ss_pred cCCEEEEE-eCCcEeee
Confidence 99999999 89998876
No 299
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.36 E-value=7.1e-13 Score=117.46 Aligned_cols=90 Identities=24% Similarity=0.484 Sum_probs=68.5
Q ss_pred ceeecccCCCc-EEEEEe-cCCCHhhHhhhHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCCh
Q 008845 11 LRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 11 ~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l---~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (551)
+.+++++.+|| ++|+|| |+||++|+.++|.+ .++.+.+.. ++.++.|+++.... +++...
T Consensus 38 ~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~-------------~~~~~~ 102 (154)
T 2ju5_A 38 EALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNH-------------QPEEQR 102 (154)
T ss_dssp HHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCC-------------CCHHHH
T ss_pred HHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccC-------------CChhhH
Confidence 44556667899 999999 99999999999999 777665532 47888888875430 011111
Q ss_pred hhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
+....+++.|+|.++|+++++|++|+++.+
T Consensus 103 ~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 103 QKNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp HHHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred hhHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 223578999999999999999999999975
No 300
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.36 E-value=8.2e-13 Score=111.91 Aligned_cols=72 Identities=18% Similarity=0.449 Sum_probs=63.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++.+ ++.++.|++|..+ .+++.|+|
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~v~~~~vd~d~~~-----------------------~~~~~~~v 86 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD--KVGFYKVDVDEQS-----------------------QIAQEVGI 86 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH--HSEEEEEETTTCH-----------------------HHHHHHTC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC--cEEEEEEECcCCH-----------------------HHHHHcCC
Confidence 3889999999999999999999999998888754 4889999888664 58899999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 87 ~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 87 RAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-ECCeEEee
Confidence 999999999 69998876
No 301
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.36 E-value=1.7e-12 Score=108.30 Aligned_cols=69 Identities=17% Similarity=0.476 Sum_probs=61.3
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
|++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|... .+++.|+|.
T Consensus 26 ~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~----~v~~~~vd~~~~~-----------------------~~~~~~~v~ 78 (112)
T 1syr_A 26 NELVIVDFFAEWCGPCKRIAPFYEECSKTYT----KMVFIKVDVDEVS-----------------------EVTEKENIT 78 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTTH-----------------------HHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC----CCEEEEEECCCCH-----------------------HHHHHcCCC
Confidence 8999999999999999999999999988874 3889999888654 588999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 79 ~~Pt~~~~-~~G~~~~~ 94 (112)
T 1syr_A 79 SMPTFKVY-KNGSSVDT 94 (112)
T ss_dssp SSSEEEEE-ETTEEEEE
T ss_pred cccEEEEE-ECCcEEEE
Confidence 99998888 69998876
No 302
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.36 E-value=1.6e-12 Score=107.33 Aligned_cols=70 Identities=16% Similarity=0.301 Sum_probs=61.3
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
-.++ ++|+||++||++|+.+.|.+.+++++++ ++.++.|+++.+. .+++.|+
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~------------------------~~~~~~~ 71 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQ------------------------GTAATNN 71 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSH------------------------HHHHHTT
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCH------------------------HHHHhcC
Confidence 3578 9999999999999999999999999983 5889999988664 4889999
Q ss_pred CCCCcEEEEEcCCCeEEEc
Q 008845 97 VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~~ 115 (551)
+.++|+++++ ++|+++.+
T Consensus 72 v~~~Pt~~~~-~~G~~~~~ 89 (107)
T 1gh2_A 72 ISATPTFQFF-RNKVRIDQ 89 (107)
T ss_dssp CCSSSEEEEE-ETTEEEEE
T ss_pred CCcccEEEEE-ECCeEEEE
Confidence 9999999999 78988763
No 303
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.35 E-value=2.5e-12 Score=105.15 Aligned_cols=70 Identities=17% Similarity=0.486 Sum_probs=62.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.+.++++.+++ +.++.|++|.+. .+++.|++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~~-----------------------~~~~~~~v 67 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDENP-----------------------DIAARYGV 67 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCCH-----------------------HHHHhCCc
Confidence 379999999999999999999999998887753 789999888664 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|+++++ ++|+++.+
T Consensus 68 ~~~Pt~~~~-~~g~~~~~ 84 (104)
T 2e0q_A 68 MSLPTVIFF-KDGEPVDE 84 (104)
T ss_dssp CSSCEEEEE-ETTEEEEE
T ss_pred cccCEEEEE-ECCeEhhh
Confidence 999999999 89999876
No 304
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.35 E-value=2.5e-12 Score=107.28 Aligned_cols=70 Identities=29% Similarity=0.635 Sum_probs=62.5
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.+++++++. ++.++.|+++.+. .+++.|++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 69 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQ------------------------ETAGKYGV 69 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCC------------------------SHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCH------------------------HHHHHcCC
Confidence 688 99999999999999999999999999974 4889999988653 38899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 70 ~~~Pt~~~~-~~G~~~~~ 86 (112)
T 2voc_A 70 MSIPTLLVL-KDGEVVET 86 (112)
T ss_dssp CSBSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCEEEEE
Confidence 999999999 89998863
No 305
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.35 E-value=2.9e-12 Score=121.94 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=80.1
Q ss_pred eeec-ccC--CCc-E-EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhh------CCCCcc
Q 008845 12 RVKL-DSL--KGK-I-GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSK------MPWLAV 80 (551)
Q Consensus 12 ~v~l-~~~--~gk-v-lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~------~~~~~~ 80 (551)
.+++ +++ +|| + |++||++||++|..++|.|+++++++++. +++|++|++|. .....+|.+. .++.+.
T Consensus 22 ~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~-gv~VI~VS~Ds-~~~~~~w~~~~~~~~~~~i~fP 99 (249)
T 3a2v_A 22 VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL-GVDLIGLSVDS-VFSHIKWKEWIERHIGVRIPFP 99 (249)
T ss_dssp EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSC-HHHHHHHHHHHHHHTCCCCCSC
T ss_pred CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC-CcEEEEEECCC-HHHHHHHHHHHHHhcCCCCcee
Confidence 7999 999 999 4 55789999999999999999999999876 49999999984 4444455442 234444
Q ss_pred ccCChhhHHHHHhhcCCC-------CCcEEEEEcCCCeEEEc
Q 008845 81 PFSDSETRDKLDELFKVM-------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 81 ~~~~~~~~~~l~~~~~v~-------~~P~~~lid~~G~i~~~ 115 (551)
.+.|.. ..+++.|++. ++|+++|||++|+|+..
T Consensus 100 il~D~~--~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~ 139 (249)
T 3a2v_A 100 IIADPQ--GTVARRLGLLHAESATHTVRGVFIVDARGVIRTM 139 (249)
T ss_dssp EEECTT--SHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE
T ss_pred EEECCc--hHHHHHhCCccccCCCcccceEEEECCCCeEEEE
Confidence 445544 4689999997 89999999999999885
No 306
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.35 E-value=2.1e-12 Score=106.08 Aligned_cols=73 Identities=25% Similarity=0.550 Sum_probs=63.0
Q ss_pred cccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 15 LDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 15 l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
+++.+++ ++|+||++||++|+.+.|.+.+++++++ ++.++.|+++... .+++
T Consensus 15 l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~------------------------~~~~ 67 (105)
T 3m9j_A 15 LDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS---NVIFLEVDVDDCQ------------------------DVAS 67 (105)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST---TSEEEEEETTTCH------------------------HHHH
T ss_pred HHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc---CeEEEEEEhhhhH------------------------HHHH
Confidence 3444688 9999999999999999999999999886 3788899888664 4889
Q ss_pred hcCCCCCcEEEEEcCCCeEEEc
Q 008845 94 LFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 94 ~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.|++.++|+++++ ++|+++.+
T Consensus 68 ~~~v~~~Pt~~~~-~~g~~~~~ 88 (105)
T 3m9j_A 68 ESEVKSMPTFQFF-KKGQKVGE 88 (105)
T ss_dssp HTTCCBSSEEEEE-ETTEEEEE
T ss_pred HcCCCcCcEEEEE-ECCeEEEE
Confidence 9999999999999 78888763
No 307
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.35 E-value=2.7e-12 Score=111.15 Aligned_cols=70 Identities=29% Similarity=0.572 Sum_probs=62.1
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.+++++++. ++.++.|+++.+. .+++.|+|
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 90 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQ------------------------ELAGAFGI 90 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCH------------------------HHHHHcCC
Confidence 367 99999999999999999999999999874 4889999988664 48899999
Q ss_pred CCCcEEEEEcCCCeEEE
Q 008845 98 MGIPHLVILDENGKVLS 114 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~ 114 (551)
.++|+++++|++|+++.
T Consensus 91 ~~~Pt~~~~~~~G~~~~ 107 (136)
T 2l5l_A 91 RSIPSILFIPMEGKPEM 107 (136)
T ss_dssp CSSCEEEEECSSSCCEE
T ss_pred CCCCEEEEECCCCcEEE
Confidence 99999999999998764
No 308
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.35 E-value=2.2e-12 Score=108.39 Aligned_cols=69 Identities=25% Similarity=0.599 Sum_probs=61.6
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+||++||++|+.+.|.|.++.++++ ++.++.|++|..+ .+++.|+|+
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~-----------------------~~~~~~~v~ 80 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDELK-----------------------DVAEAYNVE 80 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEcccCH-----------------------HHHHHcCCC
Confidence 7899999999999999999999999988875 3889999887654 588999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 81 ~~Pt~~~~-~~g~~~~~ 96 (118)
T 2vm1_A 81 AMPTFLFI-KDGEKVDS 96 (118)
T ss_dssp SBSEEEEE-ETTEEEEE
T ss_pred cCcEEEEE-eCCeEEEE
Confidence 99999999 79998876
No 309
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.35 E-value=9.9e-13 Score=122.97 Aligned_cols=105 Identities=16% Similarity=0.194 Sum_probs=79.7
Q ss_pred cCCCCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCc
Q 008845 326 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 405 (551)
Q Consensus 326 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 405 (551)
+.++..+......++++||+||++||++|+.+.|.|.++++++++. +.++.|+++..+
T Consensus 101 ~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~---v~~~~vd~~~~~------------------- 158 (210)
T 3apq_A 101 TLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL---LRIGAVNCGDDR------------------- 158 (210)
T ss_dssp ECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTCH-------------------
T ss_pred EecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc---eEEEEEECCccH-------------------
Confidence 4444444333345899999999999999999999999999998654 899999887664
Q ss_pred hhhHHHHHhcCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 406 ARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 406 d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
.+++.|+|.++||++++ ++|+++.+.. | .. ..++|.+.|++++....
T Consensus 159 ----~l~~~~~v~~~Pt~~~~-~~G~~~~~~~-------G----~~---~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 159 ----MLCRMKGVNSYPSLFIF-RSGMAAVKYN-------G----DR---SKESLVAFAMQHVRSTV 205 (210)
T ss_dssp ----HHHHHTTCCSSSEEEEE-CTTSCCEECC-------S----CC---CHHHHHHHHHHHHHCCS
T ss_pred ----HHHHHcCCCcCCeEEEE-ECCCceeEec-------C----CC---CHHHHHHHHHHhCcccc
Confidence 58999999999999999 8999876632 2 11 23556777777765543
No 310
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.35 E-value=1.5e-12 Score=108.51 Aligned_cols=71 Identities=24% Similarity=0.630 Sum_probs=62.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.|++++|+||++||++|+.+.|.|+++.++++ ++.++.|++|..+ .+++.|+|
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~-----------------------~~~~~~~v 77 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDELK-----------------------AVAEEWNV 77 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTCH-----------------------HHHHHHHC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEccccH-----------------------HHHHhCCC
Confidence 48999999999999999999999999888875 4889999887664 58899999
Q ss_pred CCcceEEEECCCCcEEEcc
Q 008845 418 SGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~ 436 (551)
.++|+++++ ++|+++.+.
T Consensus 78 ~~~Pt~~~~-~~G~~~~~~ 95 (113)
T 1ti3_A 78 EAMPTFIFL-KDGKLVDKT 95 (113)
T ss_dssp SSTTEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCEEEEEE
Confidence 999999999 799998763
No 311
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.34 E-value=4.2e-12 Score=108.44 Aligned_cols=69 Identities=14% Similarity=0.228 Sum_probs=58.5
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcC---CCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSR---QGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
.++ ++|+|||+||++|+.+.|.|.++++.+.. .+++.++.|+++... .+++.
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~------------------------~l~~~ 87 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP------------------------DVIER 87 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH------------------------HHHHH
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH------------------------hHHHh
Confidence 367 99999999999999999999999988752 236889999888664 48999
Q ss_pred cCCCCCcEEEEEcCCCe
Q 008845 95 FKVMGIPHLVILDENGK 111 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~ 111 (551)
|+|.++|++++++.+++
T Consensus 88 ~~v~~~Pt~~~~~~g~~ 104 (127)
T 3h79_A 88 MRVSGFPTMRYYTRIDK 104 (127)
T ss_dssp TTCCSSSEEEEECSSCS
T ss_pred cCCccCCEEEEEeCCCC
Confidence 99999999999965544
No 312
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.34 E-value=1.2e-12 Score=112.67 Aligned_cols=83 Identities=20% Similarity=0.381 Sum_probs=62.7
Q ss_pred cCCCCeeecccC-CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccC
Q 008845 326 GKNGGKVPVSDL-AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFG 404 (551)
Q Consensus 326 ~~~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~ 404 (551)
..++..+..... .+++++|+||++||++|+.+.|.|.+++++++.. .++.++.|+++...
T Consensus 11 ~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~vd~~~~~------------------ 71 (133)
T 2dj3_A 11 VVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-KDLVIAKMDATAND------------------ 71 (133)
T ss_dssp ECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-SSEEEEEECTTTSC------------------
T ss_pred EEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCEEEEEecCCcCH------------------
Confidence 334444433222 4899999999999999999999999999998743 24777777665442
Q ss_pred chhhHHHHHhcCCCCcceEEEECCCCcE
Q 008845 405 DARKASLSRKFKVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 405 ~d~~~~l~~~~~v~~~P~~~lid~~G~i 432 (551)
.+++.|+|+++||+++++++|++
T Consensus 72 -----~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 72 -----ITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp -----CCCSSCCCSSSSEEEEECTTCTT
T ss_pred -----HHHhhcCCCcCCEEEEEeCCCcc
Confidence 35678999999999999877654
No 313
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.34 E-value=3.2e-12 Score=120.05 Aligned_cols=102 Identities=14% Similarity=0.185 Sum_probs=80.8
Q ss_pred cCceeecccCCCc--EEEE-EecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHh-------hCCCC
Q 008845 9 LLLRVKLDSLKGK--IGLY-FSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFS-------KMPWL 78 (551)
Q Consensus 9 ~~~~v~l~~~~gk--vlv~-F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~-------~~~~~ 78 (551)
.| .+++++++|+ ++|. ||++||++|..++|.|+++++++++. +++|++|++|. ....++|.+ +.+..
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~vS~D~-~~~~~~~~~~i~~~~~~~~~~ 96 (220)
T 1xcc_A 20 DG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL-NCKLIGFSCNS-KESHDKWIEDIKYYGKLNKWE 96 (220)
T ss_dssp SS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT-TEEEEEEESSC-HHHHHHHHHHHHHHHTCSCCC
T ss_pred CC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCC-HHHHHHHHHHHHHHhcCCCCc
Confidence 56 8999999987 5554 58999999999999999999999876 49999999984 455566655 34554
Q ss_pred ccccCChhhHHHHHhhcCCC------------CCcEEEEEcCCCeEEEc
Q 008845 79 AVPFSDSETRDKLDELFKVM------------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~~~~~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~ 115 (551)
+..+.|.. ..+++.|++. .+|+++|||++|+|+..
T Consensus 97 fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~ 143 (220)
T 1xcc_A 97 IPIVCDES--RELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKAT 143 (220)
T ss_dssp CCEEECTT--SHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEE
T ss_pred ceeEECch--hHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEE
Confidence 44455544 4688999983 47999999999999985
No 314
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.34 E-value=4.4e-12 Score=105.19 Aligned_cols=73 Identities=19% Similarity=0.470 Sum_probs=62.5
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+||++||++|+.+.|.|.++++++.....++.++.|+++..+ .+++.|+|+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-----------------------~l~~~~~v~ 77 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER-----------------------NICSKYSVR 77 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH-----------------------hHHHhcCCC
Confidence 789999999999999999999999998877543346888888887664 589999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 78 ~~Pt~~~~-~~g~~~~~ 93 (111)
T 3uvt_A 78 GYPTLLLF-RGGKKVSE 93 (111)
T ss_dssp SSSEEEEE-ETTEEEEE
T ss_pred cccEEEEE-eCCcEEEe
Confidence 99999999 78988776
No 315
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.33 E-value=7.4e-12 Score=108.87 Aligned_cols=70 Identities=30% Similarity=0.572 Sum_probs=61.6
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
++.++|+||++||++|+.+.|.|.+++++++++ +.++.|++|... .+++.|+|.
T Consensus 50 ~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v~ 103 (140)
T 1v98_A 50 APLTLVDFFAPWCGPCRLVSPILEELARDHAGR---LKVVKVNVDEHP-----------------------GLAARYGVR 103 (140)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCCCH-----------------------HHHHHCCCC
Confidence 333999999999999999999999999988754 899999988664 589999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 104 ~~Pt~~~~-~~G~~~~~ 119 (140)
T 1v98_A 104 SVPTLVLF-RRGAPVAT 119 (140)
T ss_dssp SSSEEEEE-ETTEEEEE
T ss_pred ccCEEEEE-eCCcEEEE
Confidence 99999999 79998876
No 316
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.33 E-value=3.8e-12 Score=105.81 Aligned_cols=73 Identities=19% Similarity=0.444 Sum_probs=60.2
Q ss_pred ccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 16 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
.+.+|+ ++|+||++||++|+.+.|.|.++++.++ ++.++.|+++... ..+++.
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~-----------------------~~~~~~ 73 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCNQEN-----------------------KTLAKE 73 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTT-----------------------HHHHHH
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC---CeEEEEEecCcch-----------------------HHHHHH
Confidence 344688 9999999999999999999999999886 3788888887321 358899
Q ss_pred cCCCCCcEEEEEcCCCeEEEc
Q 008845 95 FKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~i~~~ 115 (551)
|++.++|+++++ ++|+++.+
T Consensus 74 ~~v~~~Pt~~~~-~~G~~~~~ 93 (111)
T 2pu9_C 74 LGIRVVPTFKIL-KENSVVGE 93 (111)
T ss_dssp HCCSBSSEEEEE-SSSSEEEE
T ss_pred cCCCeeeEEEEE-eCCcEEEE
Confidence 999999996555 89998763
No 317
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.33 E-value=4.3e-12 Score=110.43 Aligned_cols=70 Identities=17% Similarity=0.272 Sum_probs=61.8
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.+++++++. ++.++.|+++... .+++.|+|
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 76 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNP------------------------WTAEKYGV 76 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCH------------------------HHHHHHTC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCH------------------------hHHHHCCC
Confidence 377 99999999999999999999999999975 4889999988764 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 77 ~~~Pt~~~~-~~G~~~~~ 93 (140)
T 3hz4_A 77 QGTPTFKFF-CHGRPVWE 93 (140)
T ss_dssp CEESEEEEE-ETTEEEEE
T ss_pred CcCCEEEEE-eCCcEEEE
Confidence 999999999 78988753
No 318
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.33 E-value=5.8e-12 Score=104.80 Aligned_cols=70 Identities=30% Similarity=0.623 Sum_probs=61.4
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.+++++++. ++.++.|+++.+. .+++.|++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 75 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENP------------------------GTAAKYGV 75 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCH------------------------HHHHhCCC
Confidence 477 99999999999999999999999999864 4889999988764 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 76 ~~~Pt~~~~-~~G~~~~~ 92 (112)
T 1t00_A 76 MSIPTLNVY-QGGEVAKT 92 (112)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCEEEEE
Confidence 999999888 79988763
No 319
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.32 E-value=7.7e-12 Score=103.78 Aligned_cols=69 Identities=28% Similarity=0.568 Sum_probs=61.4
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++... .+++.|++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 74 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEK------------------------TLFQRFSL 74 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcCh------------------------hHHHhcCC
Confidence 467 99999999999999999999999999874 4889999998764 48899999
Q ss_pred CCCcEEEEEcCCCeEEE
Q 008845 98 MGIPHLVILDENGKVLS 114 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~ 114 (551)
.++|+++++ ++|+++.
T Consensus 75 ~~~Pt~~~~-~~g~~~~ 90 (111)
T 3gnj_A 75 KGVPQILYF-KDGEYKG 90 (111)
T ss_dssp CSSCEEEEE-ETTEEEE
T ss_pred CcCCEEEEE-ECCEEEE
Confidence 999999999 7898875
No 320
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.32 E-value=2.1e-12 Score=115.45 Aligned_cols=114 Identities=14% Similarity=0.224 Sum_probs=94.9
Q ss_pred CCccceecCCC--Ceeeccc-CCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeE-EEEEeCCCChHHHHHHH
Q 008845 319 GDLDFVVGKNG--GKVPVSD-LAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLE-VVFISSDRDQTSFDEFF 393 (551)
Q Consensus 319 ~~~~f~~~~~g--~~v~l~~-~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~-vv~vs~d~~~~~~~~~~ 393 (551)
..|+|.+..+| ++++|++ ++||++||+|| ..|||.|..+++.+.+.+.++++. +++ |+.||+|. +...++|.
T Consensus 19 ~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~--gv~~VigIS~D~-~~~~~~w~ 95 (171)
T 2xhf_A 19 IIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEE--GYHTIACIAVND-PFVMAAWG 95 (171)
T ss_dssp BCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHT--TCCEEEEEESSC-HHHHHHHH
T ss_pred CCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC--CCCEEEEEeCCC-HHHHHHHH
Confidence 45899884444 8999999 49999999998 679999999999999999999876 685 99999984 46777787
Q ss_pred hcCCC-cccccCchhhHHHHHhcCCC-----------CcceEEEECCCCcEEEcc
Q 008845 394 KGMPW-LALPFGDARKASLSRKFKVS-----------GIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 394 ~~~~~-~~~~~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~~ 436 (551)
+..+. ..+|++.|.+.++++.||+. ....++||| +|+|++..
T Consensus 96 ~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~ 149 (171)
T 2xhf_A 96 KTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVS 149 (171)
T ss_dssp HHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred HhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEE
Confidence 76663 27899999999999999984 246789998 99999884
No 321
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.32 E-value=3.3e-12 Score=107.90 Aligned_cols=71 Identities=28% Similarity=0.599 Sum_probs=63.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++.+ +.++.|++|..+ .+++.|+|
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~i 82 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD---LTVAKLDVDTNP-----------------------ETARNFQV 82 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEECCCCH-----------------------HHHHhcCC
Confidence 3789999999999999999999999999988654 899999988664 58999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 83 ~~~Pt~~~~-~~g~~~~~ 99 (121)
T 2i1u_A 83 VSIPTLILF-KDGQPVKR 99 (121)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcCCEEEEE-ECCEEEEE
Confidence 999999999 59998876
No 322
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.32 E-value=6.8e-12 Score=103.58 Aligned_cols=70 Identities=31% Similarity=0.637 Sum_probs=61.6
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++.+. .+++.|++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 72 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNP------------------------GTAPKYGI 72 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCT------------------------THHHHTTC
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCH------------------------HHHHHcCC
Confidence 477 99999999999999999999999999874 4889999888653 38899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 73 ~~~Pt~~~~-~~G~~~~~ 89 (108)
T 2trx_A 73 RGIPTLLLF-KNGEVAAT 89 (108)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred cccCEEEEE-eCCEEEEE
Confidence 999999999 89998763
No 323
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.32 E-value=5.7e-12 Score=104.08 Aligned_cols=70 Identities=26% Similarity=0.547 Sum_probs=62.3
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++... .+++.|++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~i 73 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQ------------------------KIADKYSV 73 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCH------------------------HHHHhcCc
Confidence 478 99999999999999999999999999875 4788899988664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 74 ~~~Pt~~~~-~~g~~~~~ 90 (109)
T 3tco_A 74 LNIPTTLIF-VNGQLVDS 90 (109)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred ccCCEEEEE-cCCcEEEe
Confidence 999999999 89998864
No 324
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.32 E-value=2.6e-12 Score=115.04 Aligned_cols=80 Identities=10% Similarity=0.177 Sum_probs=57.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHH---HHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPK---LIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~---l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
.||+|||+|||+||++|+.+.|. ..++.+.+.+. +.++.|+.|..++-...|.. .+...
T Consensus 38 ~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~---fv~ikVD~de~~~l~~~y~~---------------~~q~~ 99 (173)
T 3ira_A 38 ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA---FVSIKVDREERPDIDNIYMT---------------VCQII 99 (173)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH---CEEEEEETTTCHHHHHHHHH---------------HHHHH
T ss_pred hCCCEEEecccchhHhhccccccccCCHHHHHHHHhc---CceeeeCCcccCcHHHHHHH---------------HHHHH
Confidence 38999999999999999999883 24556666554 67777777655432222211 12223
Q ss_pred cCCCCcceEEEECCCCcEEEc
Q 008845 415 FKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 415 ~~v~~~P~~~lid~~G~i~~~ 435 (551)
+++.++|++++++++|+++..
T Consensus 100 ~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 100 LGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp HSCCCSSEEEEECTTSCEEEE
T ss_pred cCCCCCcceeeECCCCCceee
Confidence 599999999999999999986
No 325
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.32 E-value=1e-12 Score=112.29 Aligned_cols=70 Identities=10% Similarity=0.200 Sum_probs=61.0
Q ss_pred CCc-EEEEEecCC--CHhhHhhhHHHHHHHHHhcCCCC-EEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 19 KGK-IGLYFSASW--CGPCQRFTPILAEVYNELSRQGD-FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 19 ~gk-vlv~F~a~w--C~~C~~~~p~l~~~~~~~~~~~~-~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
.++ |||+|||+| |++|+.+.|.|.++++++.+ + +.++.|++|.+ ..++.+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~------------------------~~lA~~ 86 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQS------------------------EAIGDR 86 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHH------------------------HHHHHH
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCC------------------------HHHHHH
Confidence 455 999999999 99999999999999999874 5 78888877744 459999
Q ss_pred cCCCCCcEEEEEcCCCeEEEc
Q 008845 95 FKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~i~~~ 115 (551)
|+|+++||+++| ++|+++.+
T Consensus 87 ygV~sIPTlilF-k~G~~v~~ 106 (140)
T 2qgv_A 87 FGAFRFPATLVF-TGGNYRGV 106 (140)
T ss_dssp HTCCSSSEEEEE-ETTEEEEE
T ss_pred cCCccCCEEEEE-ECCEEEEE
Confidence 999999999999 89999874
No 326
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.32 E-value=4e-12 Score=119.87 Aligned_cols=93 Identities=23% Similarity=0.463 Sum_probs=74.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|..+ .+++.|+|
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~~-----------------------~l~~~~~v 82 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNP-----------------------GTAPKYGI 82 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCT-----------------------TTGGGGTC
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---cEEEEEECCCCH-----------------------HHHHHcCC
Confidence 4899999999999999999999999999999765 899999998764 47899999
Q ss_pred CCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 008845 418 SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 471 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~~ 471 (551)
.++||++++ ++|+++.+..+. .+ .+.|.+.|++++....
T Consensus 83 ~~~Pt~~~~-~~G~~~~~~~G~-----------~~---~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 83 RGIPTLLLF-KNGEVAATKVGA-----------LS---KGQLKEFLDANLAGSA 121 (222)
T ss_dssp CSBSEEEEE-ETTEEEEEEESC-----------CC---HHHHHHHHHHHSCCSC
T ss_pred CcCCEEEEE-ECCeEEEEeccc-----------cC---hHHHHHHHHhhccccc
Confidence 999999999 589988763221 12 3456677777765433
No 327
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.32 E-value=6.2e-13 Score=120.13 Aligned_cols=100 Identities=16% Similarity=0.238 Sum_probs=61.3
Q ss_pred eecccCCCc-EEEEEecCCCHhhHhhhHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHH-HhhCC-CCccccCChh
Q 008845 13 VKLDSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGY-FSKMP-WLAVPFSDSE 86 (551)
Q Consensus 13 v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~-~~~~~-~~~~~~~~~~ 86 (551)
+.++..+|| |+|+|||+||++|+.+.+.+ .++.+.+++ ++.++.|+++...+....+ +...+ ....... .+
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~-~~ 116 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGTERTLRTV-GD 116 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEH-HH
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcchhhhhhhh-hh
Confidence 445566799 99999999999999974333 444444443 4789999988653200000 00000 0000000 01
Q ss_pred hHHHH-HhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 87 TRDKL-DELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 87 ~~~~l-~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
....+ .+.|++.++|+++++|++|+++.+
T Consensus 117 ~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~ 146 (172)
T 3f9u_A 117 KWSYLQRVKFGANAQPFYVLIDNEGNPLNK 146 (172)
T ss_dssp HHHHHHHHHHSCCCSSEEEEECTTSCBSSC
T ss_pred hhhHHHHHHcCCCCcceEEEECCCCCEEee
Confidence 11122 588999999999999999998864
No 328
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=2.7e-12 Score=111.27 Aligned_cols=77 Identities=23% Similarity=0.397 Sum_probs=64.0
Q ss_pred ccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 335 SDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 335 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
..-++++++|+|||+||++|+.+.|.|.++++++++. ++.++.|++|..+ .+++.
T Consensus 22 ~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--~v~~~~vd~~~~~-----------------------~~~~~ 76 (137)
T 2dj0_A 22 ERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT--GLNFGKVDVGRYT-----------------------DVSTR 76 (137)
T ss_dssp HHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS--SCEEEECCTTTCH-----------------------HHHHH
T ss_pred hcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC--CeEEEEEeCccCH-----------------------HHHHH
Confidence 3434679999999999999999999999999998742 4788877776654 57889
Q ss_pred cCCC------CcceEEEECCCCcEEEccc
Q 008845 415 FKVS------GIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 415 ~~v~------~~P~~~lid~~G~i~~~~~ 437 (551)
|+|. ++||++++ ++|+++.+..
T Consensus 77 ~~v~~~~~~~~~Pt~~~~-~~G~~~~~~~ 104 (137)
T 2dj0_A 77 YKVSTSPLTKQLPTLILF-QGGKEAMRRP 104 (137)
T ss_dssp TTCCCCSSSSCSSEEEEE-SSSSEEEEES
T ss_pred ccCcccCCcCCCCEEEEE-ECCEEEEEec
Confidence 9998 99999999 7899887643
No 329
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.32 E-value=1.4e-11 Score=101.57 Aligned_cols=70 Identities=23% Similarity=0.589 Sum_probs=61.2
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++.+. .+++.|++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 71 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESP------------------------NVASEYGI 71 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHHTC
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCH------------------------HHHHHCCC
Confidence 477 99999999999999999999999999874 4889999988664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 72 ~~~Pt~~~~-~~G~~~~~ 88 (107)
T 1dby_A 72 RSIPTIMVF-KGGKKCET 88 (107)
T ss_dssp CSSCEEEEE-SSSSEEEE
T ss_pred CcCCEEEEE-eCCEEEEE
Confidence 999999888 79988763
No 330
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.31 E-value=7.1e-12 Score=102.91 Aligned_cols=70 Identities=27% Similarity=0.612 Sum_probs=61.7
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+. .+++.|++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~------------------------~~~~~~~v 69 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENP------------------------ETTSQFGI 69 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCH------------------------HHHHHcCC
Confidence 467 99999999999999999999999999874 4889999988664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 70 ~~~Pt~~~~-~~G~~~~~ 86 (105)
T 1nsw_A 70 MSIPTLILF-KGGRPVKQ 86 (105)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred ccccEEEEE-eCCeEEEE
Confidence 999999999 89988763
No 331
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.31 E-value=1.3e-11 Score=102.41 Aligned_cols=71 Identities=23% Similarity=0.476 Sum_probs=61.1
Q ss_pred Cc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCC-CCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 20 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQ-GDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 20 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
++ ++|+||++||++|+.+.|.+.++++.+... ..+.++.|+++... .+++.|++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~------------------------~l~~~~~v 76 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER------------------------NICSKYSV 76 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH------------------------hHHHhcCC
Confidence 67 999999999999999999999999887644 35888888888664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 77 ~~~Pt~~~~-~~g~~~~~ 93 (111)
T 3uvt_A 77 RGYPTLLLF-RGGKKVSE 93 (111)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCcEEEe
Confidence 999999999 78887753
No 332
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.31 E-value=5.7e-12 Score=104.92 Aligned_cols=72 Identities=29% Similarity=0.701 Sum_probs=60.1
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
.+++ ++|+||++||++|+.+.|.+.+++++++.. ++.++.|+++.+. .+++.|+
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~------------------------~~~~~~~ 73 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS-NVSFLSIDADENS------------------------EISELFE 73 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT-TSEEEEEETTTCH------------------------HHHHHTT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC-CEEEEEEecccCH------------------------HHHHHcC
Confidence 3478 999999999999999999999999986443 4889999988664 4889999
Q ss_pred CCCCcEEEEEcCCCeEEEc
Q 008845 97 VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~~ 115 (551)
+.++|+++++ ++|+++.+
T Consensus 74 v~~~Pt~~~~-~~G~~~~~ 91 (112)
T 3d6i_A 74 ISAVPYFIII-HKGTILKE 91 (112)
T ss_dssp CCSSSEEEEE-ETTEEEEE
T ss_pred CCcccEEEEE-ECCEEEEE
Confidence 9999999998 79998863
No 333
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.31 E-value=6.3e-12 Score=113.78 Aligned_cols=141 Identities=13% Similarity=0.250 Sum_probs=104.4
Q ss_pred CCcccee-c--C---------CC----Ceeeccc-CCCCEEEEEEe-cCCChhHH-hhhHHHHHHHHHH-hhcCCCe-EE
Q 008845 319 GDLDFVV-G--K---------NG----GKVPVSD-LAGKTILLYFS-AHWCPPCR-AFLPKLIDAYKKI-KERNESL-EV 377 (551)
Q Consensus 319 ~~~~f~~-~--~---------~g----~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~-~~~~~~~-~v 377 (551)
..|+|.+ + . +| +.+++++ ++||++||+|| +.|||.|. .+++.+.+.+.++ ++. ++ .|
T Consensus 6 ~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~--g~~~V 83 (182)
T 1xiy_A 6 LIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKEN--NFDDI 83 (182)
T ss_dssp BCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTS--CCSEE
T ss_pred CCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCcEE
Confidence 3588887 5 3 66 7999998 69999999888 78999999 9999999999999 776 57 49
Q ss_pred EEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC------C-----cceEEEECCCCcEEEcccchhhhhcCC
Q 008845 378 VFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS------G-----IPMLVAIGPSGRTITKEARDMIAVHGA 446 (551)
Q Consensus 378 v~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~------~-----~P~~~lid~~G~i~~~~~~~~~~~~g~ 446 (551)
+.||+| ++...++|.+.++.-.+|++.|.+..+++.||+. + .+.++||| +|+|++........ .+.
T Consensus 84 ~gvS~D-~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~v~~~~~-~~~ 160 (182)
T 1xiy_A 84 YCITNN-DIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMFQEKDKQ-HNI 160 (182)
T ss_dssp EEEESS-CHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEEECSSCC-TTC
T ss_pred EEEeCC-CHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEEEeCCcc-ccc
Confidence 999998 4467788888777336999999999999999983 2 56789998 99999985321100 000
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 008845 447 EAYPFTEERMKEIDGQYN 464 (551)
Q Consensus 447 ~~~p~~~~~~~~l~~~l~ 464 (551)
..-++...+.+++.+.|+
T Consensus 161 ~~~~~~~~~~~~vL~~L~ 178 (182)
T 1xiy_A 161 QTDPYDISTVNNVKEFLK 178 (182)
T ss_dssp SSCCCSTTSHHHHHHHHH
T ss_pred ccCcccCCCHHHHHHHHH
Confidence 111234466677777665
No 334
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.31 E-value=9.2e-12 Score=105.01 Aligned_cols=70 Identities=24% Similarity=0.540 Sum_probs=61.7
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.++++++.. ++.++.|+++.+. .+++.|+|
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~------------------------~l~~~~~v 83 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHT------------------------DLAIEYEV 83 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTH------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCH------------------------HHHHHcCC
Confidence 477 99999999999999999999999998864 4889999988654 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 84 ~~~Pt~~~~-~~G~~~~~ 100 (119)
T 1w4v_A 84 SAVPTVLAM-KNGDVVDK 100 (119)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCcEEEE
Confidence 999999999 89998763
No 335
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.31 E-value=5.3e-12 Score=123.97 Aligned_cols=74 Identities=16% Similarity=0.329 Sum_probs=65.8
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 336 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 336 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
..++|+|+|+||++||++|+.+.|.|.+++++++++ +.++.|++|..+ .+++.|
T Consensus 23 ~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---~~~~~vd~~~~~-----------------------~~~~~~ 76 (287)
T 3qou_A 23 QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ---FILAKLDCDAEQ-----------------------MIAAQF 76 (287)
T ss_dssp TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS---SEEEEEETTTCH-----------------------HHHHTT
T ss_pred hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC---eEEEEEeCccCH-----------------------HHHHHc
Confidence 335899999999999999999999999999999764 899999998765 689999
Q ss_pred CCCCcceEEEECCCCcEEEcc
Q 008845 416 KVSGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 416 ~v~~~P~~~lid~~G~i~~~~ 436 (551)
+|+++||++++ ++|+++.+.
T Consensus 77 ~v~~~Pt~~~~-~~G~~~~~~ 96 (287)
T 3qou_A 77 GLRAIPTVYLF-QNGQPVDGF 96 (287)
T ss_dssp TCCSSSEEEEE-ETTEEEEEE
T ss_pred CCCCCCeEEEE-ECCEEEEEe
Confidence 99999999999 799988763
No 336
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.31 E-value=3.7e-12 Score=107.59 Aligned_cols=81 Identities=15% Similarity=0.289 Sum_probs=61.3
Q ss_pred cCCCCeeecc-cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc--CCCeEEEEEeCCCChHHHHHHHhcCCCcccc
Q 008845 326 GKNGGKVPVS-DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER--NESLEVVFISSDRDQTSFDEFFKGMPWLALP 402 (551)
Q Consensus 326 ~~~g~~v~l~-~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~ 402 (551)
..+++.+... ..++++++|+||++||++|+.+.|.|.++++++++. ..++.++.|+++..+
T Consensus 11 ~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------- 74 (121)
T 2djj_A 11 VVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND---------------- 74 (121)
T ss_dssp ECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----------------
T ss_pred EecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----------------
Confidence 3444444332 135899999999999999999999999999999751 124788888776532
Q ss_pred cCchhhHHHHHhcCCCCcceEEEECCCCcE
Q 008845 403 FGDARKASLSRKFKVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 403 ~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 432 (551)
+++ +|+++||+++++++|++
T Consensus 75 --------~~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 --------VPD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp --------CSS--CCSSSSEEEEECSSCTT
T ss_pred --------ccc--ccCcCCeEEEEeCcCCC
Confidence 233 89999999999888774
No 337
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.30 E-value=4.9e-12 Score=109.90 Aligned_cols=70 Identities=27% Similarity=0.581 Sum_probs=59.9
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
.++ ++|+||++||++|+.+.|.|.++++.++..+ ++.++.|+++... .+++.|+
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~------------------------~~~~~~~ 88 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS------------------------MLASKFD 88 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH------------------------HHHHHTT
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH------------------------HHHHHCC
Confidence 578 9999999999999999999999999998653 4777777777553 4889999
Q ss_pred CCCCcEEEEEcCCCeEE
Q 008845 97 VMGIPHLVILDENGKVL 113 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~ 113 (551)
|.++|+++++ ++|++.
T Consensus 89 v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 89 VSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp CCSSSEEEEE-ETTEEE
T ss_pred CCccCeEEEE-ECCcEE
Confidence 9999999999 788844
No 338
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.30 E-value=2.1e-12 Score=108.12 Aligned_cols=69 Identities=23% Similarity=0.596 Sum_probs=60.6
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.|+ ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++.+. .+++.|++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~---~v~~~~vd~~~~~------------------------~l~~~~~v 81 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP---DVRFVKCDVDESP------------------------DIAKECEV 81 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEECCCCH------------------------HHHHHCCC
Confidence 578 9999999999999999999999999886 3789999988664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 82 ~~~Pt~~~~-~~G~~~~~ 98 (114)
T 2oe3_A 82 TAMPTFVLG-KDGQLIGK 98 (114)
T ss_dssp CSBSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCeEEEE
Confidence 999999888 89998763
No 339
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.30 E-value=7.1e-12 Score=110.13 Aligned_cols=71 Identities=30% Similarity=0.648 Sum_probs=62.3
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
..++ ++|+||++||++|+.+.|.|.++++++.. ++.++.|+++... .+++.|+
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~------------------------~l~~~~~ 106 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEP------------------------ALSTRFR 106 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTT
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCH------------------------HHHHHCC
Confidence 3577 99999999999999999999999999874 4889999988664 4889999
Q ss_pred CCCCcEEEEEcCCCeEEEc
Q 008845 97 VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~~ 115 (551)
|.++|+++++ ++|+++.+
T Consensus 107 v~~~Pt~~~~-~~G~~~~~ 124 (148)
T 3p2a_A 107 IRSIPTIMLY-RNGKMIDM 124 (148)
T ss_dssp CCSSSEEEEE-ETTEEEEE
T ss_pred CCccCEEEEE-ECCeEEEE
Confidence 9999999999 68988763
No 340
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.30 E-value=4.5e-12 Score=106.40 Aligned_cols=69 Identities=12% Similarity=0.104 Sum_probs=58.8
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++|+|+|||+||++|+.+.|.|+++++++. ++.++.|++|.. ++.|+|+
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~----~v~f~kvd~d~~--------------------------~~~~~v~ 72 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP----ETKFVKAIVNSC--------------------------IQHYHDN 72 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT----TSEEEEEEGGGT--------------------------STTCCGG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC----CCEEEEEEhHHh--------------------------HHHCCCC
Confidence 4599999999999999999999999999875 378888777632 4689999
Q ss_pred CcceEEEECCCCcEEEcccc
Q 008845 419 GIPMLVAIGPSGRTITKEAR 438 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~~~~ 438 (551)
++||++++ ++|+.+.+..+
T Consensus 73 ~~PT~~~f-k~G~~v~~~~G 91 (118)
T 3evi_A 73 CLPTIFVY-KNGQIEAKFIG 91 (118)
T ss_dssp GCSEEEEE-ETTEEEEEEES
T ss_pred CCCEEEEE-ECCEEEEEEeC
Confidence 99999999 89999988543
No 341
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.30 E-value=5.4e-12 Score=107.98 Aligned_cols=70 Identities=30% Similarity=0.584 Sum_probs=61.7
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++.+. .+++.|+|
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 92 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNP------------------------GTAPKYGI 92 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCC------------------------TTSGGGTC
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCH------------------------HHHHHcCC
Confidence 477 99999999999999999999999999874 4899999988653 37789999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 93 ~~~Pt~~~~-~~G~~~~~ 109 (128)
T 2o8v_B 93 RGIPTLLLF-KNGEVAAT 109 (128)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CccCEEEEE-eCCEEEEE
Confidence 999999999 89998763
No 342
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.30 E-value=4.6e-12 Score=105.29 Aligned_cols=71 Identities=17% Similarity=0.345 Sum_probs=61.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.++.+.+. ++.++.|+++... .+++.|+|
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~~-----------------------~l~~~~~v 70 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEARP-----------------------ELMKELGF 70 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGCH-----------------------HHHHHTTC
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCCH-----------------------HHHHHcCC
Confidence 37899999999999999999999998877764 4788888887554 58999999
Q ss_pred CCcceEEEECCCCcEEEcc
Q 008845 418 SGIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~ 436 (551)
+++|+++++ ++|+++.+.
T Consensus 71 ~~~Pt~~~~-~~G~~v~~~ 88 (110)
T 2l6c_A 71 ERVPTLVFI-RDGKVAKVF 88 (110)
T ss_dssp CSSCEEEEE-ESSSEEEEE
T ss_pred cccCEEEEE-ECCEEEEEE
Confidence 999999999 899998873
No 343
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.30 E-value=9.4e-12 Score=105.84 Aligned_cols=70 Identities=27% Similarity=0.619 Sum_probs=61.6
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
.+++ ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++... .+++.|+
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~------------------------~l~~~~~ 88 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELK------------------------SVASDWA 88 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSH------------------------HHHHHTT
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCH------------------------HHHHHcC
Confidence 3688 9999999999999999999999999986 4889999888654 4889999
Q ss_pred CCCCcEEEEEcCCCeEEEc
Q 008845 97 VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~~ 115 (551)
|.++|+++++ ++|+++.+
T Consensus 89 v~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1xfl_A 89 IQAMPTFMFL-KEGKILDK 106 (124)
T ss_dssp CCSSSEEEEE-ETTEEEEE
T ss_pred CCccCEEEEE-ECCEEEEE
Confidence 9999998888 89998864
No 344
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.30 E-value=9.8e-12 Score=102.14 Aligned_cols=70 Identities=24% Similarity=0.546 Sum_probs=62.2
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
+++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++.+.+ +++.|++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~------------------------~~~~~~v 71 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPS------------------------TAAKYEV 71 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHH------------------------HHHHTTC
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHH------------------------HHHhCCC
Confidence 678 99999999999999999999999999975 48899999987644 8899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 72 ~~~Pt~~~~-~~G~~~~~ 88 (106)
T 3die_A 72 MSIPTLIVF-KDGQPVDK 88 (106)
T ss_dssp CSBSEEEEE-ETTEEEEE
T ss_pred cccCEEEEE-eCCeEEEE
Confidence 999999999 58988763
No 345
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.30 E-value=1.4e-12 Score=111.77 Aligned_cols=80 Identities=21% Similarity=0.504 Sum_probs=63.4
Q ss_pred eeecccCCCc-EEEEEecCCCHhhHhhhHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhh
Q 008845 12 RVKLDSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSET 87 (551)
Q Consensus 12 ~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (551)
.+++++.+|+ ++|+||++||++|+.+.|.+ .++.+.+.. .+.++.|+++.+..
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~--------------------- 75 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEG--------------------- 75 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTH---------------------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcch---------------------
Confidence 3445555789 99999999999999999999 667666543 36677777764222
Q ss_pred HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 88 RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 88 ~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
..+++.|++.++|+++++|++|+++.+
T Consensus 76 -~~~~~~~~v~~~Pt~~~~d~~G~~~~~ 102 (130)
T 2kuc_A 76 -VELRKKYGVHAYPTLLFINSSGEVVYR 102 (130)
T ss_dssp -HHHHHHTTCCSSCEEEEECTTSCEEEE
T ss_pred -HHHHHHcCCCCCCEEEEECCCCcEEEE
Confidence 468999999999999999999998864
No 346
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.30 E-value=1.8e-11 Score=100.77 Aligned_cols=70 Identities=30% Similarity=0.628 Sum_probs=62.1
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.+++++++. ++.++.|+++.+. .+++.|++
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 72 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNP------------------------ETPNAYQV 72 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCC------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCH------------------------HHHHhcCC
Confidence 577 99999999999999999999999999974 5899999988654 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 73 ~~~Pt~~~~-~~G~~~~~ 89 (107)
T 2i4a_A 73 RSIPTLMLV-RDGKVIDK 89 (107)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CccCEEEEE-eCCEEEEE
Confidence 999999999 89998763
No 347
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.30 E-value=6.9e-12 Score=105.58 Aligned_cols=74 Identities=20% Similarity=0.420 Sum_probs=59.8
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
|++++|+||++|||+|+.+.|.|.+++++++ ..+++++++...+ .+....+++.|+|.
T Consensus 29 ~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~-----~~v~~~~~~~~~~-----------------~~~~~~~~~~~~i~ 86 (118)
T 1zma_A 29 KETATFFIGRKTCPYCRKFAGTLSGVVAETK-----AHIYFINSEEPSQ-----------------LNDLQAFRSRYGIP 86 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHC-----CCCEEEETTCGGG-----------------HHHHHHHHHHHTCC
T ss_pred CCeEEEEEECCCCccHHHHHHHHHHHHHhcC-----CeEEEEECCCcCc-----------------HHHHHHHHHHcCCC
Confidence 7899999999999999999999999988774 3567777765421 12234688999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++||++++ ++|+++.+
T Consensus 87 ~~Pt~~~~-~~G~~~~~ 102 (118)
T 1zma_A 87 TVPGFVHI-TDGQINVR 102 (118)
T ss_dssp SSCEEEEE-ETTEEEEE
T ss_pred CCCeEEEE-ECCEEEEE
Confidence 99999999 58988876
No 348
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.29 E-value=1.5e-12 Score=110.65 Aligned_cols=71 Identities=28% Similarity=0.584 Sum_probs=58.4
Q ss_pred CCCEEEEEEecCCCh--------------hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCccccc
Q 008845 338 AGKTILLYFSAHWCP--------------PCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPF 403 (551)
Q Consensus 338 ~gk~vll~F~a~wC~--------------~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 403 (551)
.||+++|+||++||+ +|+.+.|.+++++++++++ +.++.|++|.+.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~---~~~~~vd~d~~~----------------- 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNP----------------- 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSCT-----------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC---eEEEEEECCCCH-----------------
Confidence 489999999999999 9999999999998888754 889999888664
Q ss_pred CchhhHHHHHhcCCCCcceEEEECCCCcEEEc
Q 008845 404 GDARKASLSRKFKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 404 ~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 435 (551)
.+++.|+|+++|+++++ ++|+++.+
T Consensus 80 ------~l~~~~~v~~~Pt~~~~-~~G~~~~~ 104 (123)
T 1oaz_A 80 ------GTAPKYGIRGIPTLLLF-KNGEVAAT 104 (123)
T ss_dssp ------TTGGGGTCCBSSEEEEE-ESSSEEEE
T ss_pred ------HHHHHcCCCccCEEEEE-ECCEEEEE
Confidence 47899999999999999 99999876
No 349
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.29 E-value=8.4e-12 Score=110.58 Aligned_cols=70 Identities=20% Similarity=0.543 Sum_probs=62.0
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|+++++++.. ++.++.|+++.+. .++++|+|
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~i 116 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHP------------------------AVAGRHRI 116 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTST------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccH------------------------HHHHHcCC
Confidence 577 99999999999999999999999999974 4889999988654 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 117 ~~~Pt~~~~-~~G~~~~~ 133 (155)
T 2ppt_A 117 QGIPAFILF-HKGRELAR 133 (155)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcCCEEEEE-eCCeEEEE
Confidence 999999999 79998763
No 350
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=1.3e-11 Score=106.11 Aligned_cols=71 Identities=23% Similarity=0.500 Sum_probs=60.0
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcC--CCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhc
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSR--QGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 95 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 95 (551)
.++ ++|+||++||++|+.+.|.+.+++++++. .+++.++.|+++... .+++.|
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~------------------------~l~~~~ 79 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ------------------------VLASRY 79 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC------------------------HHHHHH
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH------------------------HHHHhC
Confidence 467 99999999999999999999999999872 125888988888653 488999
Q ss_pred CCCCCcEEEEEcCCCeEEE
Q 008845 96 KVMGIPHLVILDENGKVLS 114 (551)
Q Consensus 96 ~v~~~P~~~lid~~G~i~~ 114 (551)
+|.++|++++++. |+++.
T Consensus 80 ~v~~~Pt~~~~~~-g~~~~ 97 (133)
T 1x5d_A 80 GIRGFPTIKIFQK-GESPV 97 (133)
T ss_dssp TCCSSSEEEEEET-TEEEE
T ss_pred CCCeeCeEEEEeC-CCceE
Confidence 9999999999975 77654
No 351
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.29 E-value=1e-11 Score=103.66 Aligned_cols=70 Identities=30% Similarity=0.634 Sum_probs=62.3
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.++++.++. ++.++.|+++.+. .+++.|++
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~------------------------~~~~~~~v 77 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNP------------------------TTVKKYKV 77 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCH------------------------HHHHHTTC
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCH------------------------HHHHHcCC
Confidence 577 99999999999999999999999999874 4889999998764 38899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 78 ~~~Pt~~~~-~~G~~~~~ 94 (115)
T 1thx_A 78 EGVPALRLV-KGEQILDS 94 (115)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CceeEEEEE-cCCEEEEE
Confidence 999999999 89998863
No 352
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.29 E-value=3.8e-12 Score=108.41 Aligned_cols=69 Identities=23% Similarity=0.578 Sum_probs=60.9
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+|||+||++|+.+.|.|.++++.++ ++.++.|+++... .+++.|+|
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~------------------------~l~~~~~v 88 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNS------------------------EIVSKCRV 88 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCH------------------------HHHHHcCC
Confidence 578 9999999999999999999999999984 4889999998664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++..
T Consensus 89 ~~~Pt~~i~-~~G~~~~~ 105 (125)
T 1r26_A 89 LQLPTFIIA-RSGKMLGH 105 (125)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCeEEEE
Confidence 999998888 89988763
No 353
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.29 E-value=4.5e-12 Score=106.49 Aligned_cols=72 Identities=26% Similarity=0.631 Sum_probs=61.2
Q ss_pred cccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 15 LDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 15 l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
+++.+|+ ++|+||++||++|+.+.|.+.++++++ ++.++.|+++... .+++
T Consensus 28 l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~------------------------~~~~ 79 (117)
T 2xc2_A 28 LEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLE------------------------ETAR 79 (117)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSH------------------------HHHH
T ss_pred HHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccH------------------------HHHH
Confidence 3444788 999999999999999999999998877 3788888888653 4889
Q ss_pred hcCCCCCcEEEEEcCCCeEEEc
Q 008845 94 LFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 94 ~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.|++.++|+++++ ++|+++.+
T Consensus 80 ~~~v~~~Pt~~~~-~~G~~~~~ 100 (117)
T 2xc2_A 80 KYNISAMPTFIAI-KNGEKVGD 100 (117)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEE
T ss_pred HcCCCccceEEEE-eCCcEEEE
Confidence 9999999998888 78988763
No 354
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.29 E-value=9.2e-12 Score=110.09 Aligned_cols=69 Identities=16% Similarity=0.444 Sum_probs=61.4
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
+++ ++|+||++||++|+.+.|.|.++++++. ++.++.|+++... .+++.|+|
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~------------------------~l~~~~~v 83 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVP------------------------EVSEKYEI 83 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSH------------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCH------------------------HHHHHcCC
Confidence 488 9999999999999999999999999874 5889999988654 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|++++++ +|+++.+
T Consensus 84 ~~~Pt~~~~~-~G~~~~~ 100 (153)
T 2wz9_A 84 SSVPTFLFFK-NSQKIDR 100 (153)
T ss_dssp CSSSEEEEEE-TTEEEEE
T ss_pred CCCCEEEEEE-CCEEEEE
Confidence 9999999997 9998763
No 355
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.29 E-value=1.3e-11 Score=103.79 Aligned_cols=74 Identities=16% Similarity=0.393 Sum_probs=58.6
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.|+ ++|+|||+||++|+.+.|.|.++++++. ..++.++++...+ .+....+++.|+|
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~----~~v~~~~~~~~~~------------------~~~~~~~~~~~~i 85 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK----AHIYFINSEEPSQ------------------LNDLQAFRSRYGI 85 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC----CCCEEEETTCGGG------------------HHHHHHHHHHHTC
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC----CeEEEEECCCcCc------------------HHHHHHHHHHcCC
Confidence 477 9999999999999999999999999875 2466777765321 0112468899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 86 ~~~Pt~~~~-~~G~~~~~ 102 (118)
T 1zma_A 86 PTVPGFVHI-TDGQINVR 102 (118)
T ss_dssp CSSCEEEEE-ETTEEEEE
T ss_pred CCCCeEEEE-ECCEEEEE
Confidence 999999999 58988753
No 356
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.28 E-value=1.2e-11 Score=115.18 Aligned_cols=100 Identities=12% Similarity=0.071 Sum_probs=82.9
Q ss_pred ccCceeecccCCCc-EEEEEecCC-CHhhH-----hhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCC-c
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASW-CGPCQ-----RFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWL-A 79 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~w-C~~C~-----~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~-~ 79 (551)
.+|+.++|++++|| +||+||++| ||+|. .+++.|.++ + . ++.|++|+.| +....++|.++++.. +
T Consensus 36 ~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~-gv~VvgIS~D-s~~~~~~f~~~~gl~~f 108 (224)
T 3keb_A 36 DQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--P-HLKLIVITVD-SPSSLARARHEHGLPNI 108 (224)
T ss_dssp TTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--T-TSEEEEEESS-CHHHHHHHHHHHCCTTC
T ss_pred CCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--C-CCEEEEEECC-CHHHHHHHHHHcCCCCc
Confidence 46889999999999 999999988 99999 888888877 4 3 4899999998 677889999998874 4
Q ss_pred cccCChhhHHHHHhhcCCCC---------CcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVMG---------IPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~~---------~P~~~lid~~G~i~~~ 115 (551)
..++|... ..+.+.||+.. .|++||||++|+|++.
T Consensus 109 plLsD~~~-~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~ 152 (224)
T 3keb_A 109 ALLSTLRG-RDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYS 152 (224)
T ss_dssp EEEESTTC-TTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEE
T ss_pred eEEEcCCc-hHHHHHhCCccccccccCCccCEEEEEcCCCEEEEE
Confidence 44555421 35889999864 7999999999999985
No 357
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.28 E-value=1.8e-12 Score=112.09 Aligned_cols=76 Identities=25% Similarity=0.304 Sum_probs=60.5
Q ss_pred EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCc
Q 008845 341 TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGI 420 (551)
Q Consensus 341 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~ 420 (551)
+++|+|||+||++|+.+.|.|.+++++++ +.++.|+++..... ...+....+++.|+|.++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~--------------~~~d~~~~l~~~~~v~~~ 93 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGE--------------RELSAARLEMNKAGVEGT 93 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCH--------------HHHHHHHHHHHHHTCCSS
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhh--------------hhhhhhHHHHHHcCCcee
Confidence 89999999999999999999998887763 67888888543211 011334578999999999
Q ss_pred ceEEEECCCCcEEEcc
Q 008845 421 PMLVAIGPSGRTITKE 436 (551)
Q Consensus 421 P~~~lid~~G~i~~~~ 436 (551)
||+++++ +|+++.+.
T Consensus 94 Pt~~~~~-~G~~v~~~ 108 (135)
T 3emx_A 94 PTLVFYK-EGRIVDKL 108 (135)
T ss_dssp SEEEEEE-TTEEEEEE
T ss_pred CeEEEEc-CCEEEEEE
Confidence 9999996 99998874
No 358
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.28 E-value=3.3e-12 Score=110.91 Aligned_cols=72 Identities=24% Similarity=0.539 Sum_probs=62.7
Q ss_pred ccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 16 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
++.+|+ ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++... .+++.
T Consensus 42 ~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~------------------------~~~~~ 94 (139)
T 3d22_A 42 ASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELS------------------------DFSAS 94 (139)
T ss_dssp HHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSH------------------------HHHHH
T ss_pred HhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccH------------------------HHHHH
Confidence 334688 9999999999999999999999999884 4889999988654 48899
Q ss_pred cCCCCCcEEEEEcCCCeEEEc
Q 008845 95 FKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~i~~~ 115 (551)
|+|.++|+++++ ++|+++.+
T Consensus 95 ~~v~~~Pt~~~~-~~G~~~~~ 114 (139)
T 3d22_A 95 WEIKATPTFFFL-RDGQQVDK 114 (139)
T ss_dssp TTCCEESEEEEE-ETTEEEEE
T ss_pred cCCCcccEEEEE-cCCeEEEE
Confidence 999999999998 89998863
No 359
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.28 E-value=4.5e-12 Score=109.29 Aligned_cols=72 Identities=19% Similarity=0.450 Sum_probs=58.6
Q ss_pred cccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 15 LDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 15 l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
+++.+|+ ++|+|||+||++|+.+.|.|.++++.+ ++.++.|+++... .+++
T Consensus 35 l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~------------------------~l~~ 86 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHP------------------------KLND 86 (133)
T ss_dssp HTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCH------------------------HHHH
T ss_pred HHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchH------------------------HHHH
Confidence 4566789 999999999999999999999887765 3677888877653 4889
Q ss_pred hcCCCCCcEEEEE-cCCCe--EEE
Q 008845 94 LFKVMGIPHLVIL-DENGK--VLS 114 (551)
Q Consensus 94 ~~~v~~~P~~~li-d~~G~--i~~ 114 (551)
.|+|.++|+++++ +++|+ ++.
T Consensus 87 ~~~v~~~Pt~~~~~~~~g~g~~~~ 110 (133)
T 3cxg_A 87 QHNIKALPTFEFYFNLNNEWVLVH 110 (133)
T ss_dssp HTTCCSSSEEEEEEEETTEEEEEE
T ss_pred hcCCCCCCEEEEEEecCCCeEEEE
Confidence 9999999999998 34666 665
No 360
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.27 E-value=8.3e-12 Score=102.57 Aligned_cols=73 Identities=30% Similarity=0.643 Sum_probs=62.5
Q ss_pred ccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 16 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
++.+++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++.+. .+++.
T Consensus 16 ~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~ 69 (106)
T 1xwb_A 16 TKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECE------------------------DIAME 69 (106)
T ss_dssp HHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCH------------------------HHHHH
T ss_pred HhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchH------------------------HHHHH
Confidence 344688 99999999999999999999999999863 5889999988654 48899
Q ss_pred cCCCCCcEEEEEcCCCeEEEc
Q 008845 95 FKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~i~~~ 115 (551)
|++.++|+++++ ++|+++.+
T Consensus 70 ~~v~~~Pt~~~~-~~G~~~~~ 89 (106)
T 1xwb_A 70 YNISSMPTFVFL-KNGVKVEE 89 (106)
T ss_dssp TTCCSSSEEEEE-ETTEEEEE
T ss_pred cCCCcccEEEEE-cCCcEEEE
Confidence 999999998888 78988763
No 361
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.27 E-value=1.7e-11 Score=101.86 Aligned_cols=69 Identities=25% Similarity=0.540 Sum_probs=60.7
Q ss_pred Cc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCC
Q 008845 20 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM 98 (551)
Q Consensus 20 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 98 (551)
++ ++|+||++||++|+.+.|.|.++++.++. ++.++.|+++... .+++.|++.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v~ 77 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVA------------------------AVAEAAGIT 77 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTH------------------------HHHHHHTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchH------------------------HHHHHcCCC
Confidence 78 99999999999999999999999999864 4889999888653 488999999
Q ss_pred CCcEEEEEcCCCeEEEc
Q 008845 99 GIPHLVILDENGKVLSD 115 (551)
Q Consensus 99 ~~P~~~lid~~G~i~~~ 115 (551)
++|+++++ ++|+++.+
T Consensus 78 ~~Pt~~~~-~~G~~~~~ 93 (112)
T 1ep7_A 78 AMPTFHVY-KDGVKADD 93 (112)
T ss_dssp BSSEEEEE-ETTEEEEE
T ss_pred cccEEEEE-ECCeEEEE
Confidence 99998887 79998763
No 362
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.27 E-value=6.9e-12 Score=105.25 Aligned_cols=87 Identities=11% Similarity=0.140 Sum_probs=67.3
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
+++ |+|+|||+||++|+.+.|.|.++++++. ++.++.|+++.. ...|+|
T Consensus 22 ~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~---------------------------~~~~~v 71 (118)
T 3evi_A 22 EDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC---------------------------IQHYHD 71 (118)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT---------------------------STTCCG
T ss_pred CCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh---------------------------HHHCCC
Confidence 356 9999999999999999999999999986 478888887732 267999
Q ss_pred CCCcEEEEEcCCCeEEEcC-cchhhhhcCCCCCCchHHHHHHHHH
Q 008845 98 MGIPHLVILDENGKVLSDG-GVEIIREYGVEGYPFTVERIKEMKE 141 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~ 141 (551)
.++||++++ ++|+.+.+- |.. ..|. ..++.+.++.++.
T Consensus 72 ~~~PT~~~f-k~G~~v~~~~G~~---~~gg--~~~~~~~le~~L~ 110 (118)
T 3evi_A 72 NCLPTIFVY-KNGQIEAKFIGII---ECGG--INLKLEELEWKLA 110 (118)
T ss_dssp GGCSEEEEE-ETTEEEEEEESTT---TTTC--SSCCHHHHHHHHH
T ss_pred CCCCEEEEE-ECCEEEEEEeChh---hhCC--CCCCHHHHHHHHH
Confidence 999999999 899988752 111 1121 2467788887764
No 363
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=1.6e-11 Score=104.55 Aligned_cols=69 Identities=20% Similarity=0.360 Sum_probs=59.8
Q ss_pred CcEEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCC
Q 008845 20 GKIGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMG 99 (551)
Q Consensus 20 gkvlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 99 (551)
++++|+|||+||++|+.+.|.|.++++.++.. ++.++.|+++... .+++.|+|.+
T Consensus 23 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~v~~~~vd~~~~~------------------------~~~~~~~v~~ 77 (126)
T 1x5e_A 23 GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL-EVNIAKVDVTEQP------------------------GLSGRFIINA 77 (126)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEETTTCH------------------------HHHHHTTCCS
T ss_pred CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC-CeEEEEEECcCCH------------------------HHHHHcCCcc
Confidence 34999999999999999999999999998753 4889999888664 3889999999
Q ss_pred CcEEEEEcCCCeEEE
Q 008845 100 IPHLVILDENGKVLS 114 (551)
Q Consensus 100 ~P~~~lid~~G~i~~ 114 (551)
+|+++++ ++|++..
T Consensus 78 ~Pt~~~~-~~G~~~~ 91 (126)
T 1x5e_A 78 LPTIYHC-KDGEFRR 91 (126)
T ss_dssp SSEEEEE-ETTEEEE
T ss_pred cCEEEEE-eCCeEEE
Confidence 9999999 8898643
No 364
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=1.2e-11 Score=105.83 Aligned_cols=67 Identities=30% Similarity=0.511 Sum_probs=59.2
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.+++++++. .+.++.|+++... .+++.|+|
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~------------------------~l~~~~~v 87 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQ------------------------SLGGQYGV 87 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCH------------------------HHHHHHTC
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCH------------------------HHHHHcCC
Confidence 467 99999999999999999999999999874 4788889888654 48899999
Q ss_pred CCCcEEEEEcCCCe
Q 008845 98 MGIPHLVILDENGK 111 (551)
Q Consensus 98 ~~~P~~~lid~~G~ 111 (551)
.++|++++++.+|+
T Consensus 88 ~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 88 QGFPTIKIFGANKN 101 (130)
T ss_dssp CSSSEEEEESSCTT
T ss_pred CccCEEEEEeCCCC
Confidence 99999999988776
No 365
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.26 E-value=5.2e-12 Score=108.67 Aligned_cols=69 Identities=25% Similarity=0.538 Sum_probs=57.5
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.++++.++..+++.++.|+++... .+++.|+|
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~------------------------~~~~~~~v 79 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAND------------------------ITNDQYKV 79 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSC------------------------CCCSSCCC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCH------------------------HHHhhcCC
Confidence 478 99999999999999999999999999986446888877776442 25678999
Q ss_pred CCCcEEEEEcCCCe
Q 008845 98 MGIPHLVILDENGK 111 (551)
Q Consensus 98 ~~~P~~~lid~~G~ 111 (551)
.++|++++++.+|+
T Consensus 80 ~~~Pt~~~~~~g~~ 93 (133)
T 2dj3_A 80 EGFPTIYFAPSGDK 93 (133)
T ss_dssp SSSSEEEEECTTCT
T ss_pred CcCCEEEEEeCCCc
Confidence 99999999976553
No 366
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.26 E-value=1.2e-11 Score=104.21 Aligned_cols=70 Identities=30% Similarity=0.557 Sum_probs=60.3
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.++++++ . ++.++.|+++... .+++.|+|
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~-~v~~~~vd~~~~~------------------------~~~~~~~i 74 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN--K-DVTFIKVDVDKNG------------------------NAADAYGV 74 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--T-TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--C-CeEEEEEECCCCH------------------------HHHHhcCC
Confidence 478 999999999999999999999999988 2 5889999998764 38899999
Q ss_pred CCCcEEEEEcC---CCeEEEc
Q 008845 98 MGIPHLVILDE---NGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~---~G~i~~~ 115 (551)
.++|++++++. +|+++.+
T Consensus 75 ~~~Pt~~~~~~~~~~G~~~~~ 95 (118)
T 2f51_A 75 SSIPALFFVKKEGNEIKTLDQ 95 (118)
T ss_dssp CSSSEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEeCCCCcceEEEe
Confidence 99999999964 3777763
No 367
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.26 E-value=1.9e-11 Score=100.20 Aligned_cols=70 Identities=26% Similarity=0.579 Sum_probs=61.0
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.+++++++. ++.++.|+++.+. .+++.|++
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 70 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAP------------------------GIATQYNI 70 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchH------------------------HHHHhCCC
Confidence 467 99999999999999999999999999874 4888899888664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 71 ~~~Pt~~~~-~~g~~~~~ 87 (105)
T 1fb6_A 71 RSIPTVLFF-KNGERKES 87 (105)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCeEEEE
Confidence 999999888 79988763
No 368
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.26 E-value=3.2e-11 Score=111.30 Aligned_cols=103 Identities=21% Similarity=0.284 Sum_probs=84.4
Q ss_pred cCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCC-------CCc
Q 008845 9 LLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMP-------WLA 79 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~-------~~~ 79 (551)
.++.|+|++++|| +||+|| +.||+.|..+++.|++.++++++.+ ++|++||+| +.....+|..... ..+
T Consensus 41 ~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g-~~vigiS~D-s~~sh~aw~~~~~~~~~~~~l~f 118 (216)
T 3sbc_A 41 VFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQG-AQVLFASTD-SEYSLLAWTNIPRKEGGLGPINI 118 (216)
T ss_dssp EEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTT-EEEEEEESS-CHHHHHHHHTSCGGGTCCCSCSS
T ss_pred CCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCC-ceEEEeecC-chhhHHHHHHHHHHhCCccCccc
Confidence 4578999999999 999999 9999999999999999999999874 999999998 5667777775431 233
Q ss_pred cccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 80 VPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 80 ~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
..+.|.+ .++++.||+. ..+.+||||++|+|+..
T Consensus 119 pllsD~~--~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~ 158 (216)
T 3sbc_A 119 PLLADTN--HSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHI 158 (216)
T ss_dssp CEEECTT--SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred ceEeCCC--CHHHHHcCCeeccCCceeeEEEEECCCCeEEEE
Confidence 3345544 4799999983 46899999999999874
No 369
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.25 E-value=2e-11 Score=103.20 Aligned_cols=69 Identities=29% Similarity=0.643 Sum_probs=60.5
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++... .+++.|++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~------------------------~~~~~~~v 85 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP---NAVFLKVDVDELK------------------------PIAEQFSV 85 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECCCCH------------------------HHHHHcCC
Confidence 578 9999999999999999999999999886 3788999988654 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 86 ~~~Pt~~~~-~~G~~~~~ 102 (122)
T 2vlu_A 86 EAMPTFLFM-KEGDVKDR 102 (122)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCEEEEE
Confidence 999998888 89998763
No 370
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.25 E-value=1.9e-11 Score=103.71 Aligned_cols=71 Identities=21% Similarity=0.503 Sum_probs=59.6
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
.+|+ ++|+||++||++|+.+.|.+.+++++++ ++.++.|+++... ..+++.|+
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~-----------------------~~~~~~~~ 88 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQEN-----------------------KTLAKELG 88 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTT-----------------------HHHHHHHC
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCcch-----------------------HHHHHHcC
Confidence 3688 9999999999999999999999999886 4788888887321 35889999
Q ss_pred CCCCcEEEEEcCCCeEEEc
Q 008845 97 VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~~ 115 (551)
+.++|+++++ ++|+++.+
T Consensus 89 v~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1faa_A 89 IRVVPTFKIL-KENSVVGE 106 (124)
T ss_dssp CSSSSEEEEE-ETTEEEEE
T ss_pred CCeeeEEEEE-eCCcEEEE
Confidence 9999997666 89998764
No 371
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.25 E-value=9.3e-12 Score=97.86 Aligned_cols=64 Identities=19% Similarity=0.433 Sum_probs=56.2
Q ss_pred CEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCC
Q 008845 340 KTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSG 419 (551)
Q Consensus 340 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~ 419 (551)
.+++++||++||++|+.+.|.|+++++++++ ++.++.|++|.++ ++++.|++++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~-----------------------~~~~~~~v~~ 56 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD---AVEVEYINVMENP-----------------------QKAMEYGIMA 56 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS---SEEEEEEESSSSC-----------------------CTTTSTTTCC
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC---ceEEEEEECCCCH-----------------------HHHHHCCCcc
Confidence 5789999999999999999999999888864 4899999998654 4788999999
Q ss_pred cceEEEECCCCcE
Q 008845 420 IPMLVAIGPSGRT 432 (551)
Q Consensus 420 ~P~~~lid~~G~i 432 (551)
+|++++ +|++
T Consensus 57 ~Pt~~~---~G~~ 66 (85)
T 1fo5_A 57 VPTIVI---NGDV 66 (85)
T ss_dssp SSEEEE---TTEE
T ss_pred cCEEEE---CCEE
Confidence 999998 7887
No 372
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.25 E-value=2.2e-12 Score=108.53 Aligned_cols=72 Identities=26% Similarity=0.553 Sum_probs=60.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.+.++++.++....++.++.|+.+... .+++.|+|
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----------------------~~~~~~~v 79 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES-----------------------DLAQQYGV 79 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC-----------------------SSHHHHTC
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH-----------------------HHHHHCCC
Confidence 4899999999999999999999999999988754335777777766543 47889999
Q ss_pred CCcceEEEECCCCcEE
Q 008845 418 SGIPMLVAIGPSGRTI 433 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~ 433 (551)
+++|+++++ ++|+++
T Consensus 80 ~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 80 RGYPTIKFF-RNGDTA 94 (120)
T ss_dssp CSSSEEEEE-ESSCSS
T ss_pred CcccEEEEE-eCCCcC
Confidence 999999999 678764
No 373
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=1e-11 Score=107.58 Aligned_cols=74 Identities=23% Similarity=0.366 Sum_probs=62.3
Q ss_pred ccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 16 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
..-+++ ++|+|||+||++|+.+.|.|.+++++++.. ++.++.|+++... .+++.
T Consensus 22 ~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~v~~~~vd~~~~~------------------------~~~~~ 76 (137)
T 2dj0_A 22 ERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT-GLNFGKVDVGRYT------------------------DVSTR 76 (137)
T ss_dssp HHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS-SCEEEECCTTTCH------------------------HHHHH
T ss_pred hcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCccCH------------------------HHHHH
Confidence 344577 999999999999999999999999999753 4788888777654 48888
Q ss_pred cCCC------CCcEEEEEcCCCeEEEc
Q 008845 95 FKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 95 ~~v~------~~P~~~lid~~G~i~~~ 115 (551)
|+|. ++|+++++ ++|+++.+
T Consensus 77 ~~v~~~~~~~~~Pt~~~~-~~G~~~~~ 102 (137)
T 2dj0_A 77 YKVSTSPLTKQLPTLILF-QGGKEAMR 102 (137)
T ss_dssp TTCCCCSSSSCSSEEEEE-SSSSEEEE
T ss_pred ccCcccCCcCCCCEEEEE-ECCEEEEE
Confidence 9998 99999999 78988764
No 374
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.25 E-value=4.5e-11 Score=126.21 Aligned_cols=188 Identities=11% Similarity=0.103 Sum_probs=114.2
Q ss_pred CCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcCc
Q 008845 178 EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFEL 257 (551)
Q Consensus 178 ~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~v 257 (551)
.++.+++.|+++||++|+.+.|.+.++++++.+.+..+.++.++++.++ ...+++.|+|
T Consensus 29 ~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~---------------------~~~l~~~~~V 87 (519)
T 3t58_A 29 SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET---------------------NSAVCREFNI 87 (519)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG---------------------GHHHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc---------------------cHHHHHHcCC
Confidence 4689999999999999999999999999999874445666666665443 5688999999
Q ss_pred CCcceEEEECC---CCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCee--
Q 008845 258 STLPTLVIIGP---DGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV-- 332 (551)
Q Consensus 258 ~~~P~lvi~~~---~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v-- 332 (551)
.++||+++++. +|+.... ..| ..+.+.+.+++........ ..... ..|.+.. .+.+.+
T Consensus 88 ~~~PTl~~f~~g~~~G~~~~~-------~~g----~~~~~~L~~~l~~~l~~~~----~~~P~-~~p~l~~-it~~~l~~ 150 (519)
T 3t58_A 88 AGFPTVRFFQAFTKNGSGATL-------PGA----GANVQTLRMRLIDALESHR----DTWPP-ACPPLEP-AKLNDIDG 150 (519)
T ss_dssp CSBSEEEEECTTCCSCCCEEE-------CCS----SCCHHHHHHHHHHHHTTCC----SCCCT-TCCCCSB-CCHHHHTT
T ss_pred cccCEEEEEcCcccCCCceeE-------ecC----CCCHHHHHHHHHHHHhhcc----ccCCC-CCCccCc-CCHHHHHH
Confidence 99999999986 3332111 111 1356666666654432111 00000 0011111 000111
Q ss_pred ecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHH
Q 008845 333 PVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLS 412 (551)
Q Consensus 333 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~ 412 (551)
-++.-..++++|.|.... .+...++...+... .++.|-.+ .+.+ ..++
T Consensus 151 ~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~-~~v~v~~v-~~~~-----------------------~~l~ 198 (519)
T 3t58_A 151 FFTRNKADYLALVFERED-------SYLGREVTLDLSQY-HAVAVRRV-LNTE-----------------------SDLV 198 (519)
T ss_dssp GGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTC-TTEEEEEE-ETTC-----------------------HHHH
T ss_pred HhccCCCCeEEEEecCCc-------hHHHHHHHHHhhcc-CCeeEEEe-cCch-----------------------HHHH
Confidence 011223578888888653 11233334444322 23444333 2222 3689
Q ss_pred HhcCCCCcceEEEECCCCcEEEc
Q 008845 413 RKFKVSGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 413 ~~~~v~~~P~~~lid~~G~i~~~ 435 (551)
+.|||+.+|++++++++|++...
T Consensus 199 ~kfgV~~~Pslvl~~~nGk~~~~ 221 (519)
T 3t58_A 199 NKFGVTDFPSCYLLLRNGSVSRV 221 (519)
T ss_dssp HHHTCCCSSEEEEEETTSCEEEC
T ss_pred HHcCCCCCCeEEEEeCCCceeec
Confidence 99999999999999999987544
No 375
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.25 E-value=8.8e-12 Score=98.02 Aligned_cols=63 Identities=17% Similarity=0.341 Sum_probs=55.3
Q ss_pred EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCc
Q 008845 341 TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGI 420 (551)
Q Consensus 341 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~ 420 (551)
.++++||++||++|+.+.|.|++++++++++ +.++.|++|.++ .+++.|+++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~~-----------------------~~~~~~~v~~~ 56 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDK---IDVEKIDIMVDR-----------------------EKAIEYGLMAV 56 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSS---CCEEEECTTTCG-----------------------GGGGGTCSSCS
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCC---eEEEEEECCCCH-----------------------HHHHhCCceee
Confidence 4689999999999999999999999988754 889999888664 47889999999
Q ss_pred ceEEEECCCCcE
Q 008845 421 PMLVAIGPSGRT 432 (551)
Q Consensus 421 P~~~lid~~G~i 432 (551)
|++++ +|++
T Consensus 57 Pt~~~---~G~~ 65 (85)
T 1nho_A 57 PAIAI---NGVV 65 (85)
T ss_dssp SEEEE---TTTE
T ss_pred CEEEE---CCEE
Confidence 99998 7887
No 376
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.25 E-value=3.1e-11 Score=98.48 Aligned_cols=69 Identities=22% Similarity=0.570 Sum_probs=60.9
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.+++ +.++.|+++.+. .+++.|++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~------------------------~~~~~~~v 67 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENP------------------------DIAARYGV 67 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCH------------------------HHHHhCCc
Confidence 477 99999999999999999999999998863 789999988664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 68 ~~~Pt~~~~-~~g~~~~~ 84 (104)
T 2e0q_A 68 MSLPTVIFF-KDGEPVDE 84 (104)
T ss_dssp CSSCEEEEE-ETTEEEEE
T ss_pred cccCEEEEE-ECCeEhhh
Confidence 999999999 89998763
No 377
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.89 E-value=6.4e-13 Score=114.01 Aligned_cols=79 Identities=27% Similarity=0.438 Sum_probs=65.0
Q ss_pred CceeecccCCCc-EEEEEecCCCHhhHhhhHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCCh
Q 008845 10 LLRVKLDSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 10 ~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (551)
.+.++++...|+ ++|+|||+||++|+.+.|.+ .++++.+.. ++.++.|+++.+..
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~------------------- 67 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEG------------------- 67 (130)
Confidence 667888888899 99999999999999999999 888887764 46777777653322
Q ss_pred hhHHHHHhhcCCCCCcEEEEEcC-CCeE
Q 008845 86 ETRDKLDELFKVMGIPHLVILDE-NGKV 112 (551)
Q Consensus 86 ~~~~~l~~~~~v~~~P~~~lid~-~G~i 112 (551)
..+++.|+|.++|+++++|+ +|++
T Consensus 68 ---~~~~~~~~v~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 68 ---QELARRYRVPGTPTFVFLVPKAGAW 92 (130)
Confidence 35889999999999999985 5877
No 378
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.24 E-value=1.6e-11 Score=105.98 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=56.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
|+++||+|||+||++|+.+.|.|.++++++. ++.++.|+++.. .+.|+|.
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~--------------------------~~~~~i~ 79 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSC--------------------------IEHYHDN 79 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSS--------------------------CSSCCSS
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcC--------------------------cccCCCC
Confidence 6899999999999999999999999988873 377777766543 1589999
Q ss_pred CcceEEEECCCCcEEEcc
Q 008845 419 GIPMLVAIGPSGRTITKE 436 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~~ 436 (551)
++||+++++ +|+++.+.
T Consensus 80 ~~Pt~~~~~-~G~~v~~~ 96 (135)
T 2dbc_A 80 CLPTIFVYK-NGQIEGKF 96 (135)
T ss_dssp CCSEEEEES-SSSCSEEE
T ss_pred CCCEEEEEE-CCEEEEEE
Confidence 999999995 89988764
No 379
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.24 E-value=4.2e-11 Score=99.60 Aligned_cols=72 Identities=31% Similarity=0.612 Sum_probs=62.3
Q ss_pred ccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 16 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
+...|+ ++|+||++||++|+.+.|.+.++++.++ ++.++.|+++... .+++.
T Consensus 22 ~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~------------------------~~~~~ 74 (113)
T 1ti3_A 22 GKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELK------------------------AVAEE 74 (113)
T ss_dssp HTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCH------------------------HHHHH
T ss_pred hhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccH------------------------HHHHh
Confidence 334688 9999999999999999999999999886 4889999988654 48899
Q ss_pred cCCCCCcEEEEEcCCCeEEEc
Q 008845 95 FKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~i~~~ 115 (551)
|++.++|+++++ ++|+++.+
T Consensus 75 ~~v~~~Pt~~~~-~~G~~~~~ 94 (113)
T 1ti3_A 75 WNVEAMPTFIFL-KDGKLVDK 94 (113)
T ss_dssp HHCSSTTEEEEE-ETTEEEEE
T ss_pred CCCCcccEEEEE-eCCEEEEE
Confidence 999999999999 79998764
No 380
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.24 E-value=2.6e-11 Score=99.14 Aligned_cols=72 Identities=28% Similarity=0.650 Sum_probs=61.9
Q ss_pred ccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 16 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
++..++ ++|+||++||++|+.+.|.+.++++.++ ++.++.|+++... .+++.
T Consensus 15 ~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~------------------------~~~~~ 67 (104)
T 2vim_A 15 NENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNE------------------------EAAAK 67 (104)
T ss_dssp HTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HHHHH
T ss_pred HhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCH------------------------HHHHH
Confidence 444688 9999999999999999999999999885 4889999988654 48899
Q ss_pred cCCCCCcEEEEEcCCCeEEEc
Q 008845 95 FKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~i~~~ 115 (551)
|++.++|+++++ ++|+++.+
T Consensus 68 ~~v~~~Pt~~~~-~~g~~~~~ 87 (104)
T 2vim_A 68 YSVTAMPTFVFI-KDGKEVDR 87 (104)
T ss_dssp TTCCSSSEEEEE-ETTEEEEE
T ss_pred cCCccccEEEEE-eCCcEEEE
Confidence 999999998888 58988763
No 381
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.24 E-value=1.4e-11 Score=104.48 Aligned_cols=78 Identities=24% Similarity=0.589 Sum_probs=61.0
Q ss_pred CCCEEEEEEecC-------CChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHH
Q 008845 338 AGKTILLYFSAH-------WCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKAS 410 (551)
Q Consensus 338 ~gk~vll~F~a~-------wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 410 (551)
.|++++|+|||+ ||++|+.+.|.|.++++++++ ++.++.|+++... .+ .+....
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~-~~---------------~d~~~~ 83 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEKP-YW---------------KDPNND 83 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT---TEEEEEEECCCHH-HH---------------HCTTCH
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC---CcEEEEEECCCch-hh---------------hchhHH
Confidence 489999999999 999999999999998887754 4889999886321 11 022346
Q ss_pred HHHhcCCCCcceEEEECCCCcEEE
Q 008845 411 LSRKFKVSGIPMLVAIGPSGRTIT 434 (551)
Q Consensus 411 l~~~~~v~~~P~~~lid~~G~i~~ 434 (551)
+++.|+|+++||+++++..+++..
T Consensus 84 ~~~~~~i~~~Pt~~~~~~~~~~~g 107 (123)
T 1wou_A 84 FRKNLKVTAVPTLLKYGTPQKLVE 107 (123)
T ss_dssp HHHHHCCCSSSEEEETTSSCEEEG
T ss_pred HHHHCCCCeeCEEEEEcCCceEec
Confidence 888999999999999987555443
No 382
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.23 E-value=3e-11 Score=100.56 Aligned_cols=69 Identities=26% Similarity=0.567 Sum_probs=60.2
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.|+ ++|+||++||++|+.+.|.+.+++++++ ++.++.|+++... .+++.|++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~------------------------~~~~~~~v 77 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVS------------------------EVTEKENI 77 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTH------------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCH------------------------HHHHHcCC
Confidence 578 9999999999999999999999999875 4889999988654 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 78 ~~~Pt~~~~-~~G~~~~~ 94 (112)
T 1syr_A 78 TSMPTFKVY-KNGSSVDT 94 (112)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-ECCcEEEE
Confidence 999998888 68988763
No 383
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.23 E-value=4.6e-12 Score=110.26 Aligned_cols=90 Identities=9% Similarity=0.128 Sum_probs=59.9
Q ss_pred CCEEEEEEecCC--ChhHHhhhHHHHHHHHHHhhcCCCeE--EEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 339 GKTILLYFSAHW--CPPCRAFLPKLIDAYKKIKERNESLE--VVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 339 gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~--vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
++.++|+||++| |++|+.+.|.|+++++++ ++ +. ++.|++|.. .++++.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~---v~~~~~~Vd~d~~-----------------------~~la~~ 86 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ---FDWQVAVADLEQS-----------------------EAIGDR 86 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT---SCCEEEEECHHHH-----------------------HHHHHT
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc---cceeEEEEECCCC-----------------------HHHHHh
Confidence 345788899887 999999999999999988 43 66 777776543 368999
Q ss_pred cCCCCcceEEEECCCCcEEEcccchhhhhcCCCCCCCCHHHHHHHHHHHHHHhccC
Q 008845 415 FKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGW 470 (551)
Q Consensus 415 ~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~~~~~~ 470 (551)
|+|+++||++++ ++|+++.+..+. .. .++|.+.|++++...
T Consensus 87 ~~V~~iPT~~~f-k~G~~v~~~~G~-----------~~---~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 87 FNVRRFPATLVF-TDGKLRGALSGI-----------HP---WAELLTLMRSIVDTP 127 (142)
T ss_dssp TTCCSSSEEEEE-SCC----CEESC-----------CC---HHHHHHHHHHHHC--
T ss_pred cCCCcCCeEEEE-eCCEEEEEEeCC-----------CC---HHHHHHHHHHHhccc
Confidence 999999999999 899998773221 12 245666676666543
No 384
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.23 E-value=4.3e-11 Score=98.63 Aligned_cols=70 Identities=29% Similarity=0.595 Sum_probs=61.9
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.+.. ++.++.|+++.+. .+++.|++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 70 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENP------------------------KTAMRYRV 70 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCH------------------------hHHHhCCC
Confidence 477 99999999999999999999999999874 4889999988664 38899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++..
T Consensus 71 ~~~Pt~~~~-~~g~~~~~ 87 (109)
T 2yzu_A 71 MSIPTVILF-KDGQPVEV 87 (109)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcCCEEEEE-eCCcEeee
Confidence 999999999 89988763
No 385
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.23 E-value=5.6e-12 Score=106.73 Aligned_cols=71 Identities=23% Similarity=0.562 Sum_probs=61.5
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.++++.++.. ++.++.|+++... .+++.|++
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~------------------------~~~~~~~v 86 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQS------------------------QIAQEVGI 86 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCH------------------------HHHHHHTC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCH------------------------HHHHHcCC
Confidence 577 999999999999999999999999888753 3889999988654 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 87 ~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 87 RAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-ECCeEEee
Confidence 999999999 68988763
No 386
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.22 E-value=2.4e-11 Score=102.71 Aligned_cols=67 Identities=18% Similarity=0.304 Sum_probs=58.9
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++... .+++.|+|
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v 73 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYP------------------------QTCQKAGI 73 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCH------------------------HHHHHcCC
Confidence 467 99999999999999999999999999875 4889999988664 38899999
Q ss_pred CCCcEEEEEcCCCe
Q 008845 98 MGIPHLVILDENGK 111 (551)
Q Consensus 98 ~~~P~~~lid~~G~ 111 (551)
.++|++++++.+|+
T Consensus 74 ~~~Pt~~~~~~~~~ 87 (122)
T 3aps_A 74 KAYPSVKLYQYERA 87 (122)
T ss_dssp CSSSEEEEEEEEGG
T ss_pred CccceEEEEeCCCc
Confidence 99999999976654
No 387
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.22 E-value=2e-11 Score=119.90 Aligned_cols=70 Identities=20% Similarity=0.423 Sum_probs=62.8
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
+|+ |+|+||++||+||+.+.|.|.++++++++ ++.++.|+++.+. .+++.|+|
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v 78 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQ------------------------MIAAQFGL 78 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCH------------------------HHHHTTTC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCH------------------------HHHHHcCC
Confidence 578 99999999999999999999999999984 4889999998764 48999999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++||++++ ++|+++.+
T Consensus 79 ~~~Pt~~~~-~~G~~~~~ 95 (287)
T 3qou_A 79 RAIPTVYLF-QNGQPVDG 95 (287)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CCCCeEEEE-ECCEEEEE
Confidence 999999999 78988863
No 388
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.22 E-value=4.2e-11 Score=100.99 Aligned_cols=70 Identities=30% Similarity=0.664 Sum_probs=61.2
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.+++++++. ++.++.|+++.+. .+++.|++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~i 82 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNP------------------------ETARNFQV 82 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCH------------------------HHHHhcCC
Confidence 477 99999999999999999999999999864 4889999988664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 83 ~~~Pt~~~~-~~g~~~~~ 99 (121)
T 2i1u_A 83 VSIPTLILF-KDGQPVKR 99 (121)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcCCEEEEE-ECCEEEEE
Confidence 999999998 68988763
No 389
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.22 E-value=7.4e-12 Score=108.19 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=58.3
Q ss_pred cEEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCC
Q 008845 21 KIGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGI 100 (551)
Q Consensus 21 kvlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 100 (551)
.++|+|||+||++|+.+.|.|.+++++++ +.++.|+++..... . ..+....+++.|+|.++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~--~-------------~~d~~~~l~~~~~v~~~ 93 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGE--R-------------ELSAARLEMNKAGVEGT 93 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCH--H-------------HHHHHHHHHHHHTCCSS
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhh--h-------------hhhhhHHHHHHcCCcee
Confidence 38999999999999999999999998874 66888888543210 0 00112568899999999
Q ss_pred cEEEEEcCCCeEEEc
Q 008845 101 PHLVILDENGKVLSD 115 (551)
Q Consensus 101 P~~~lid~~G~i~~~ 115 (551)
|++++++ +|+++.+
T Consensus 94 Pt~~~~~-~G~~v~~ 107 (135)
T 3emx_A 94 PTLVFYK-EGRIVDK 107 (135)
T ss_dssp SEEEEEE-TTEEEEE
T ss_pred CeEEEEc-CCEEEEE
Confidence 9988885 9998874
No 390
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.21 E-value=5.7e-11 Score=103.18 Aligned_cols=70 Identities=30% Similarity=0.592 Sum_probs=61.2
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.++++.++. ++.++.|+++.+. .+++.|++
T Consensus 49 ~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 102 (140)
T 1v98_A 49 GAPLTLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHP------------------------GLAARYGV 102 (140)
T ss_dssp CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCH------------------------HHHHHCCC
Confidence 345 99999999999999999999999999874 4899999988664 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++..
T Consensus 103 ~~~Pt~~~~-~~G~~~~~ 119 (140)
T 1v98_A 103 RSVPTLVLF-RRGAPVAT 119 (140)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CccCEEEEE-eCCcEEEE
Confidence 999999999 79998763
No 391
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.19 E-value=1.3e-12 Score=107.77 Aligned_cols=73 Identities=19% Similarity=0.315 Sum_probs=52.5
Q ss_pred eeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHH
Q 008845 331 KVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKAS 410 (551)
Q Consensus 331 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 410 (551)
.+.+++..+|+++|+|||+||++|+.+.|.|.++++++ ..|-+..|... +....
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~-------~~v~~~~~~~~-------------------~~~~~ 57 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV-------PYVECSPNGPG-------------------TPQAQ 57 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGS-------CEEESCTTCTT-------------------SCCCH
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhC-------CEEEEeccccc-------------------chhHH
Confidence 34566666888999999999999999999998876443 23333322110 11247
Q ss_pred HHHhcCCCCcceEEEECCCCcE
Q 008845 411 LSRKFKVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 411 l~~~~~v~~~P~~~lid~~G~i 432 (551)
+++.|+|+++||+++ +|+.
T Consensus 58 l~~~~~V~~~PT~~i---~G~~ 76 (106)
T 3kp8_A 58 ECTEAGITSYPTWII---NGRT 76 (106)
T ss_dssp HHHHTTCCSSSEEEE---TTEE
T ss_pred HHHHcCCeEeCEEEE---CCEE
Confidence 899999999999777 7764
No 392
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.19 E-value=4.8e-11 Score=112.43 Aligned_cols=70 Identities=31% Similarity=0.638 Sum_probs=61.3
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+|||+||++|+.+.|.|.++++.++. .+.++.|+++...+ +++.|+|
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~------------------------l~~~~~v 82 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPG------------------------TAPKYGI 82 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTT------------------------TGGGGTC
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHH------------------------HHHHcCC
Confidence 477 99999999999999999999999999975 48899999886543 7889999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 83 ~~~Pt~~~~-~~G~~~~~ 99 (222)
T 3dxb_A 83 RGIPTLLLF-KNGEVAAT 99 (222)
T ss_dssp CSBSEEEEE-ETTEEEEE
T ss_pred CcCCEEEEE-ECCeEEEE
Confidence 999999999 58988763
No 393
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.19 E-value=6.1e-11 Score=99.41 Aligned_cols=69 Identities=29% Similarity=0.657 Sum_probs=60.6
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.|.++++.++ ++.++.|+++... .+++.|++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~------------------------~~~~~~~v 79 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELK------------------------DVAEAYNV 79 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCH------------------------HHHHHcCC
Confidence 478 9999999999999999999999999886 4788898888653 48899999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++|+++++ ++|+++.+
T Consensus 80 ~~~Pt~~~~-~~g~~~~~ 96 (118)
T 2vm1_A 80 EAMPTFLFI-KDGEKVDS 96 (118)
T ss_dssp CSBSEEEEE-ETTEEEEE
T ss_pred CcCcEEEEE-eCCeEEEE
Confidence 999999988 79988763
No 394
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.19 E-value=7.1e-12 Score=109.87 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=65.2
Q ss_pred ccCCCc-EEEEEecCCCHhhHhhhHHHHHHHH--HhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHH
Q 008845 16 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYN--ELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLD 92 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~--~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (551)
+...|| |+|+|||+||++|+.+.|.+.+..+ .+.. ..++.|++|.+.. .+.
T Consensus 40 A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---~~fv~V~vD~e~~-----------------------~~~ 93 (151)
T 3ph9_A 40 AQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---NKFIMLNLMHETT-----------------------DKN 93 (151)
T ss_dssp HHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---HTCEEEEESSCCS-----------------------CGG
T ss_pred HHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---cCeEEEEecCCch-----------------------hhH
Confidence 333588 9999999999999999999886421 2211 1256666653211 134
Q ss_pred hhcCCCCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHH
Q 008845 93 ELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQE 143 (551)
Q Consensus 93 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 143 (551)
..|++.++||+++++++|+++.+- +..++...+.+....+.++++..
T Consensus 94 ~~~~v~~~PT~~f~~~~G~~v~~~----~G~~~~~~~~~~~~~~~~ll~~~ 140 (151)
T 3ph9_A 94 LSPDGQYVPRIMFVDPSLTVRADI----AGRYSNRLYTYEPRDLPLLIENM 140 (151)
T ss_dssp GCTTCCCSSEEEEECTTSCBCTTC----CCSCTTSTTCCCGGGHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCCCEEEEE----eCCcCCcccccchhhHHHHHHHH
Confidence 678999999999999999988742 11223344555666666666543
No 395
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.19 E-value=2.7e-12 Score=105.74 Aligned_cols=73 Identities=19% Similarity=0.423 Sum_probs=53.6
Q ss_pred ceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHH
Q 008845 11 LRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRD 89 (551)
Q Consensus 11 ~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (551)
+.+++++..|+ ++|+|||+||++|+.+.|.|.++++.++ .|+++.+.. .+...
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~------------------~~~~~ 56 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGP------------------GTPQA 56 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCT------------------TSCCC
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccc------------------cchhH
Confidence 34667788889 9999999999999999999999986653 334441100 00013
Q ss_pred HHHhhcCCCCCcEEEEEcCCCeE
Q 008845 90 KLDELFKVMGIPHLVILDENGKV 112 (551)
Q Consensus 90 ~l~~~~~v~~~P~~~lid~~G~i 112 (551)
.+++.|+|.++||+++ +|+.
T Consensus 57 ~l~~~~~V~~~PT~~i---~G~~ 76 (106)
T 3kp8_A 57 QECTEAGITSYPTWII---NGRT 76 (106)
T ss_dssp HHHHHTTCCSSSEEEE---TTEE
T ss_pred HHHHHcCCeEeCEEEE---CCEE
Confidence 5899999999999776 6764
No 396
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.19 E-value=2.5e-12 Score=115.10 Aligned_cols=78 Identities=28% Similarity=0.508 Sum_probs=59.4
Q ss_pred eecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHH
Q 008845 13 VKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKL 91 (551)
Q Consensus 13 v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (551)
++++..+|| +||+|||+||++|+.+.|.|.++++.... ++.++.|+++.+.+ .+
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~-----------------------~~ 93 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEE-----------------------PK 93 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGS-----------------------CS
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCch-----------------------HH
Confidence 444555789 99999999999999999999998766543 24577777764422 13
Q ss_pred HhhcCC--CCCcEEEEEcCCCeEEEc
Q 008845 92 DELFKV--MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 92 ~~~~~v--~~~P~~~lid~~G~i~~~ 115 (551)
...|++ .++|+++++|++|+++.+
T Consensus 94 ~~~~~~~~~~~Pt~~~~d~~G~~~~~ 119 (164)
T 1sen_A 94 DEDFSPDGGYIPRILFLDPSGKVHPE 119 (164)
T ss_dssp CGGGCTTCSCSSEEEEECTTSCBCTT
T ss_pred HHHhcccCCcCCeEEEECCCCCEEEE
Confidence 456777 669999999999998864
No 397
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.18 E-value=4.8e-11 Score=97.36 Aligned_cols=76 Identities=9% Similarity=0.190 Sum_probs=63.7
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+|+|+|||+|+...|.++++.+. . ++.++.|.+|..++ -.+.++..|+|+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~---~v~~~~vdVde~r~-------------------~Sn~IA~~~~V~ 79 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--R---DMDGYYLIVQQERD-------------------LSDYIAKKTNVK 79 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H---TCCEEEEEGGGGHH-------------------HHHHHHHHHTCC
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C---CceEEEEEeecCch-------------------hhHHHHHHhCCc
Confidence 78999999999999999999999998874 3 38899999986641 124689999999
Q ss_pred C-cceEEEECCCCcEEEcccch
Q 008845 419 G-IPMLVAIGPSGRTITKEARD 439 (551)
Q Consensus 419 ~-~P~~~lid~~G~i~~~~~~~ 439 (551)
+ .|+++++ ++|+++.+....
T Consensus 80 h~sPq~il~-k~G~~v~~~SH~ 100 (112)
T 3iv4_A 80 HESPQAFYF-VNGEMVWNRDHG 100 (112)
T ss_dssp CCSSEEEEE-ETTEEEEEEEGG
T ss_pred cCCCeEEEE-ECCEEEEEeecc
Confidence 5 9999999 899999885443
No 398
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.18 E-value=1e-10 Score=109.14 Aligned_cols=70 Identities=21% Similarity=0.310 Sum_probs=61.7
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
..|+ ++|+|||+||++|+.+.|.+.++++.++. .+.++.|+++... .+++.|+
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~ 165 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDR------------------------MLCRMKG 165 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCH------------------------HHHHHTT
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccH------------------------HHHHHcC
Confidence 3578 99999999999999999999999999874 4889999988664 4889999
Q ss_pred CCCCcEEEEEcCCCeEEE
Q 008845 97 VMGIPHLVILDENGKVLS 114 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~ 114 (551)
|.++|+++++ ++|+++.
T Consensus 166 v~~~Pt~~~~-~~G~~~~ 182 (210)
T 3apq_A 166 VNSYPSLFIF-RSGMAAV 182 (210)
T ss_dssp CCSSSEEEEE-CTTSCCE
T ss_pred CCcCCeEEEE-ECCCcee
Confidence 9999999999 8898754
No 399
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.18 E-value=1.6e-10 Score=114.64 Aligned_cols=100 Identities=23% Similarity=0.223 Sum_probs=84.5
Q ss_pred ccCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCCh
Q 008845 8 ELLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 85 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (551)
.+|++++|++++|| |||+|| +.|||.|..+++.|.+. ..+ ++.|++||.| +.+..++|..+++..+..++|.
T Consensus 12 ~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~-~~~v~gis~D-~~~~~~~f~~~~~l~fp~l~D~ 85 (322)
T 4eo3_A 12 DEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NFE-KAQVVGISRD-SVEALKRFKEKNDLKVTLLSDP 85 (322)
T ss_dssp TTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CCT-TEEEEEEESC-CHHHHHHHHHHHTCCSEEEECT
T ss_pred CCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hhC-CCEEEEEeCC-CHHHHHHHHHhhCCceEEEEcC
Confidence 67999999999999 999999 67999999998888642 222 5899999997 6788899999999877777776
Q ss_pred hhHHHHHhhcCCC----CCcEEEEEcCCCeEEEc
Q 008845 86 ETRDKLDELFKVM----GIPHLVILDENGKVLSD 115 (551)
Q Consensus 86 ~~~~~l~~~~~v~----~~P~~~lid~~G~i~~~ 115 (551)
+ ..+++.||+. .+|++|+||++|+|+..
T Consensus 86 ~--~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~ 117 (322)
T 4eo3_A 86 E--GILHEFFNVLENGKTVRSTFLIDRWGFVRKE 117 (322)
T ss_dssp T--CHHHHHTTCEETTEECCEEEEECTTSBEEEE
T ss_pred c--hHHHHhcCCCCCCcCccEEEEECCCCEEEEE
Confidence 6 4699999994 57899999999999864
No 400
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.18 E-value=2.2e-12 Score=110.48 Aligned_cols=70 Identities=29% Similarity=0.607 Sum_probs=60.4
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|... .+++.|+|
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~-----------------------~~~~~~~v 87 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDELK-----------------------EVAEKYNV 87 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTTSG-----------------------GGHHHHTC
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccchH-----------------------HHHHHcCC
Confidence 48999999999999999999999999988875 3778888776553 57899999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
.++|+++++ ++|+++.+
T Consensus 88 ~~~Pt~~~~-~~g~~~~~ 104 (130)
T 1wmj_A 88 EAMPTFLFI-KDGAEADK 104 (130)
T ss_dssp CSSCCCCBC-TTTTCCBC
T ss_pred CccceEEEE-eCCeEEEE
Confidence 999999888 89998766
No 401
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.16 E-value=7.8e-11 Score=115.99 Aligned_cols=70 Identities=26% Similarity=0.525 Sum_probs=60.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
++++||+|||+||++|+.+.|.|.++++.+++. +.++.|++|.+. ...+++.|+|.
T Consensus 35 ~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~---~~~~~v~~d~~~---------------------~~~l~~~~~I~ 90 (298)
T 3ed3_A 35 NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV---VQVAAVNCDLNK---------------------NKALCAKYDVN 90 (298)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTSTT---------------------THHHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC---cEEEEEEccCcc---------------------CHHHHHhCCCC
Confidence 789999999999999999999999999998764 899999998543 24799999999
Q ss_pred CcceEEEECCCCcEE
Q 008845 419 GIPMLVAIGPSGRTI 433 (551)
Q Consensus 419 ~~P~~~lid~~G~i~ 433 (551)
++||+++++. |+++
T Consensus 91 ~~Pt~~~~~~-g~~v 104 (298)
T 3ed3_A 91 GFPTLMVFRP-PKID 104 (298)
T ss_dssp BSSEEEEEEC-CCC-
T ss_pred ccceEEEEEC-Ccee
Confidence 9999999965 5543
No 402
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.16 E-value=1.8e-10 Score=103.14 Aligned_cols=71 Identities=18% Similarity=0.316 Sum_probs=59.2
Q ss_pred CCCEEEEEEec-------CCChhHHhhhHHHHHHHHHHhhcC--CCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhh
Q 008845 338 AGKTILLYFSA-------HWCPPCRAFLPKLIDAYKKIKERN--ESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARK 408 (551)
Q Consensus 338 ~gk~vll~F~a-------~wC~~C~~~~p~l~~l~~~~~~~~--~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~ 408 (551)
++.+|||+||| +||++|+.+.|.|+++++++.... .++.++.|++|..+
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~---------------------- 93 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVP---------------------- 93 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCH----------------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCH----------------------
Confidence 46689999999 499999999999999999997321 24888888888765
Q ss_pred HHHHHhcCCCCcceEEEECCCCc
Q 008845 409 ASLSRKFKVSGIPMLVAIGPSGR 431 (551)
Q Consensus 409 ~~l~~~~~v~~~P~~~lid~~G~ 431 (551)
.++..|+|+++||++++.+++.
T Consensus 94 -~la~~~~I~siPtl~~F~~g~~ 115 (178)
T 3ga4_A 94 -QLVKDLKLQNVPHLVVYPPAES 115 (178)
T ss_dssp -HHHHHTTCCSSCEEEEECCCCG
T ss_pred -HHHHHcCCCCCCEEEEEcCCCC
Confidence 6999999999999999955443
No 403
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.16 E-value=8.3e-11 Score=101.54 Aligned_cols=88 Identities=14% Similarity=0.161 Sum_probs=64.8
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
+|+ ++|+|||+||++|+.+.|.|.++++++. ++.++.|+++... +.|+|
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~---------------------------~~~~i 78 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI---------------------------EHYHD 78 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC---------------------------SSCCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc---------------------------ccCCC
Confidence 468 9999999999999999999999999885 4778887776431 56999
Q ss_pred CCCcEEEEEcCCCeEEEcC-cchhhhhcCCCCCCchHHHHHHHHHH
Q 008845 98 MGIPHLVILDENGKVLSDG-GVEIIREYGVEGYPFTVERIKEMKEQ 142 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~ 142 (551)
.++||++++ ++|+++.+- |.. ..+.. .++.+.++.++..
T Consensus 79 ~~~Pt~~~~-~~G~~v~~~~G~~---~~~~~--~~~~~~l~~~l~~ 118 (135)
T 2dbc_A 79 NCLPTIFVY-KNGQIEGKFIGII---ECGGI--NLKLEELEWKLSE 118 (135)
T ss_dssp SCCSEEEEE-SSSSCSEEEESTT---TTTCT--TCCHHHHHHHHHH
T ss_pred CCCCEEEEE-ECCEEEEEEEeEE---eeCCC--cCCHHHHHHHHHH
Confidence 999999999 588876541 111 11111 2456777776644
No 404
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.16 E-value=3.3e-11 Score=107.88 Aligned_cols=86 Identities=19% Similarity=0.167 Sum_probs=61.5
Q ss_pred eeecccCCCc-EEEEEecCCCHhhHhhhHH---HHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhh
Q 008845 12 RVKLDSLKGK-IGLYFSASWCGPCQRFTPI---LAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSET 87 (551)
Q Consensus 12 ~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~---l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (551)
.+..+..+|| |+|+|||+||++|+.+.|. ..++++.+.+ ++.++.|+.+...+....|..
T Consensus 31 a~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~-------------- 94 (173)
T 3ira_A 31 AFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMT-------------- 94 (173)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHH--------------
T ss_pred HHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHH--------------
Confidence 3444555789 9999999999999999883 2456666653 367777877766543222221
Q ss_pred HHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 88 RDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 88 ~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.+...+++.++|++++++++|+++..
T Consensus 95 --~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 95 --VCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp --HHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred --HHHHHcCCCCCcceeeECCCCCceee
Confidence 12233599999999999999999975
No 405
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.16 E-value=8.6e-12 Score=103.27 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=55.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
...+||+|||+||++|+.+.+.+...++.... ...+.++.|+++.+.. ..++..|+|.
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~~---------------------~~la~~~~V~ 75 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPLP---------------------PGLELARPVT 75 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCCC---------------------TTCBCSSCCC
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCCc---------------------hhHHHHCCCC
Confidence 56899999999999999998766443332110 1126788899886531 2467889999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++||+++++ +|+.+.+
T Consensus 76 g~PT~i~f~-~G~ev~R 91 (116)
T 3dml_A 76 FTPTFVLMA-GDVESGR 91 (116)
T ss_dssp SSSEEEEEE-TTEEEEE
T ss_pred CCCEEEEEE-CCEEEee
Confidence 999999997 9999987
No 406
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.76 E-value=3.6e-12 Score=104.58 Aligned_cols=70 Identities=26% Similarity=0.617 Sum_probs=60.5
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++++|+||++||++|+.+.|.+.++.++++++ +.++.|++|.+. .+++.|++.
T Consensus 19 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v~ 72 (106)
T 2yj7_A 19 DKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK---VKVVKVNVDENP-----------------------NTAAQYGIR 72 (106)
Confidence 789999999999999999999999998888653 777777776543 578999999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|+++++ ++|+++.+
T Consensus 73 ~~Pt~~~~-~~g~~~~~ 88 (106)
T 2yj7_A 73 SIPTLLLF-KNGQVVDR 88 (106)
Confidence 99999999 89998776
No 407
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.15 E-value=9.3e-11 Score=104.83 Aligned_cols=100 Identities=14% Similarity=0.206 Sum_probs=84.0
Q ss_pred ceeecccC-CCc-E-EEEEecCCCHhhHh-hhHHHHHHHHHhcCCCCE-EEEEEeCCCCHHHHHHHHhhCCCC--ccccC
Q 008845 11 LRVKLDSL-KGK-I-GLYFSASWCGPCQR-FTPILAEVYNELSRQGDF-EVIFVSGDEDDEAFKGYFSKMPWL--AVPFS 83 (551)
Q Consensus 11 ~~v~l~~~-~gk-v-lv~F~a~wC~~C~~-~~p~l~~~~~~~~~~~~~-~vv~v~~d~~~~~~~~~~~~~~~~--~~~~~ 83 (551)
+.++|+++ +|| + |+.||+.|||.|.. ++|.|++.++++++.| + +|+.|+.| +....++|.++.+.. +..++
T Consensus 37 ~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g-~d~VigIS~D-~~~~~~~f~~~~~l~~~f~lLs 114 (176)
T 4f82_A 37 NACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG-IDEIWCVSVN-DAFVMGAWGRDLHTAGKVRMMA 114 (176)
T ss_dssp EEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT-CCEEEEEESS-CHHHHHHHHHHTTCTTTSEEEE
T ss_pred eEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC-CCEEEEEeCC-CHHHHHHHHHHhCCCCCceEEE
Confidence 67899997 999 5 55677999999999 9999999999999875 8 89999998 678899999998876 55566
Q ss_pred ChhhHHHHHhhcCCC-----------CCcEEEEEcCCCeEEEc
Q 008845 84 DSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 115 (551)
|.+ ..+++.||+. ..|+++|| ++|+|+..
T Consensus 115 D~~--~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~ 154 (176)
T 4f82_A 115 DGS--AAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTL 154 (176)
T ss_dssp CTT--CHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEE
T ss_pred cCc--hHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEE
Confidence 655 4688999873 24889999 99999875
No 408
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.14 E-value=3.1e-11 Score=101.39 Aligned_cols=70 Identities=27% Similarity=0.587 Sum_probs=58.5
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
.++ ++|+||++||++|+.+.|.+.++++.++..+ ++.++.|+++... .+++.|+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~------------------------~~~~~~~ 78 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES------------------------DLAQQYG 78 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC------------------------SSHHHHT
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH------------------------HHHHHCC
Confidence 578 9999999999999999999999999987643 5777777776542 3788999
Q ss_pred CCCCcEEEEEcCCCeEE
Q 008845 97 VMGIPHLVILDENGKVL 113 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~ 113 (551)
+.++|+++++ ++|+++
T Consensus 79 v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 79 VRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp CCSSSEEEEE-ESSCSS
T ss_pred CCcccEEEEE-eCCCcC
Confidence 9999999999 677654
No 409
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.14 E-value=1.9e-10 Score=106.35 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=85.0
Q ss_pred ccCceeecccCCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhC-------CCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM-------PWL 78 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~-------~~~ 78 (551)
++++.|+|++++|| +||+|| +.||+.|..++..|++.+.++++.+ ++|++||+| +....++|..+. +..
T Consensus 44 ~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g-~~vigiS~D-s~~sh~~w~~~~~~~~~~~~l~ 121 (219)
T 3tue_A 44 GSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELN-CEVLACSID-SEYAHLQWTLQDRKKGGLGTMA 121 (219)
T ss_dssp SCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTT-EEEEEEESS-CHHHHHHHHHSCGGGTCCCSCS
T ss_pred CCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCC-cEEEEeeCC-chhhHHHHhhhhHHhcCccccc
Confidence 35678999999999 999999 8999999999999999999999884 999999999 666777887653 233
Q ss_pred ccccCChhhHHHHHhhcCCC------CCcEEEEEcCCCeEEEc
Q 008845 79 AVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 79 ~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 115 (551)
+..+.|.+ .++++.||+. ....+||||++|+|+..
T Consensus 122 fpllsD~~--~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~ 162 (219)
T 3tue_A 122 IPILADKT--KNIARSYGVLEESQGVAYRGLFIIDPHGMLRQI 162 (219)
T ss_dssp SCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred cccccCcc--cHHHHHcCCcccCCCeeEEEEEEECCCCeEEEE
Confidence 33345555 4799999984 23688999999999874
No 410
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.14 E-value=4e-11 Score=97.84 Aligned_cols=88 Identities=10% Similarity=0.114 Sum_probs=67.0
Q ss_pred cceecccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccc
Q 008845 3 IMKIYELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVP 81 (551)
Q Consensus 3 ~~~~~~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 81 (551)
.|..|++.+++.-.--.++ ++|+|+|+|||+|+...|.++++++. . ++.++.|+++..++
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~---~v~~~~vdVde~r~--------------- 67 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-R---DMDGYYLIVQQERD--------------- 67 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H---TCCEEEEEGGGGHH---------------
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C---CceEEEEEeecCch---------------
Confidence 3445554444421111267 99999999999999999999999874 2 57899999987654
Q ss_pred cCChhhHHHHHhhcCCC-CCcEEEEEcCCCeEEEc
Q 008845 82 FSDSETRDKLDELFKVM-GIPHLVILDENGKVLSD 115 (551)
Q Consensus 82 ~~~~~~~~~l~~~~~v~-~~P~~~lid~~G~i~~~ 115 (551)
-...++..|+|. ..|+++++ ++|+++..
T Consensus 68 -----~Sn~IA~~~~V~h~sPq~il~-k~G~~v~~ 96 (112)
T 3iv4_A 68 -----LSDYIAKKTNVKHESPQAFYF-VNGEMVWN 96 (112)
T ss_dssp -----HHHHHHHHHTCCCCSSEEEEE-ETTEEEEE
T ss_pred -----hhHHHHHHhCCccCCCeEEEE-ECCEEEEE
Confidence 113589999999 59999999 89999986
No 411
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.13 E-value=1.6e-10 Score=103.38 Aligned_cols=66 Identities=24% Similarity=0.320 Sum_probs=57.0
Q ss_pred Cc-EEEEEec-------CCCHhhHhhhHHHHHHHHHhcCC---CCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhH
Q 008845 20 GK-IGLYFSA-------SWCGPCQRFTPILAEVYNELSRQ---GDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETR 88 (551)
Q Consensus 20 gk-vlv~F~a-------~wC~~C~~~~p~l~~~~~~~~~~---~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (551)
+. |||+||| +||++|+.+.|.|+++++++... +++.++.|++|...+
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~---------------------- 94 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQ---------------------- 94 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHH----------------------
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHH----------------------
Confidence 45 9999999 49999999999999999998621 368899999987654
Q ss_pred HHHHhhcCCCCCcEEEEEcCCC
Q 008845 89 DKLDELFKVMGIPHLVILDENG 110 (551)
Q Consensus 89 ~~l~~~~~v~~~P~~~lid~~G 110 (551)
++.+|+|+++||++++ ++|
T Consensus 95 --la~~~~I~siPtl~~F-~~g 113 (178)
T 3ga4_A 95 --LVKDLKLQNVPHLVVY-PPA 113 (178)
T ss_dssp --HHHHTTCCSSCEEEEE-CCC
T ss_pred --HHHHcCCCCCCEEEEE-cCC
Confidence 9999999999999999 555
No 412
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.12 E-value=7.8e-11 Score=99.36 Aligned_cols=66 Identities=21% Similarity=0.510 Sum_probs=54.6
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCC---CCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhh
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQ---GDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 94 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (551)
+++ ++|+|||+||++|+.+.|.|.+++++++.. .++.++.|+++... +++
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-------------------------~~~- 77 (121)
T 2djj_A 24 DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-------------------------VPD- 77 (121)
T ss_dssp TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-------------------------CSS-
T ss_pred CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-------------------------ccc-
Confidence 578 999999999999999999999999999852 25788888877431 223
Q ss_pred cCCCCCcEEEEEcCCCe
Q 008845 95 FKVMGIPHLVILDENGK 111 (551)
Q Consensus 95 ~~v~~~P~~~lid~~G~ 111 (551)
+|.++|++++++.+|+
T Consensus 78 -~v~~~Pt~~~~~~~~~ 93 (121)
T 2djj_A 78 -EIQGFPTIKLYPAGAK 93 (121)
T ss_dssp -CCSSSSEEEEECSSCT
T ss_pred -ccCcCCeEEEEeCcCC
Confidence 9999999999977665
No 413
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.12 E-value=4.3e-11 Score=113.49 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=59.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
++++|||+|||+||++|+.+.|.|.++++++. ++.++.|+++. . .++..|+|
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~----~v~f~kVd~d~-~-----------------------~l~~~~~I 183 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP----MVKFCKIKASN-T-----------------------GAGDRFSS 183 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT----TSEEEEEEHHH-H-----------------------CCTTSSCT
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CCEEEEEeCCc-H-----------------------HHHHHCCC
Confidence 48999999999999999999999999998875 37788777643 1 25778999
Q ss_pred CCcceEEEECCCCcEEEccc
Q 008845 418 SGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~~ 437 (551)
.++||++++ ++|+++.+..
T Consensus 184 ~~~PTll~~-~~G~~v~~~v 202 (245)
T 1a0r_P 184 DVLPTLLVY-KGGELLSNFI 202 (245)
T ss_dssp TTCSEEEEE-ETTEEEEEET
T ss_pred CCCCEEEEE-ECCEEEEEEe
Confidence 999999999 5999987743
No 414
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.11 E-value=1.2e-10 Score=98.64 Aligned_cols=79 Identities=25% Similarity=0.506 Sum_probs=60.0
Q ss_pred ccCCCc-EEEEEecC-------CCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhh
Q 008845 16 DSLKGK-IGLYFSAS-------WCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSET 87 (551)
Q Consensus 16 ~~~~gk-vlv~F~a~-------wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (551)
.+..|+ ++|+|||+ ||++|+.+.|.|.+++++++. ++.++.|+++... .+ . + .
T Consensus 20 ~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~-~~---~-----------d--~ 80 (123)
T 1wou_A 20 EQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKP-YW---K-----------D--P 80 (123)
T ss_dssp HTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHH-HH---H-----------C--T
T ss_pred HHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCch-hh---h-----------c--h
Confidence 344588 99999999 999999999999999988864 5889999886321 10 0 0 0
Q ss_pred HHHHHhhcCCCCCcEEEEEcCCCeEE
Q 008845 88 RDKLDELFKVMGIPHLVILDENGKVL 113 (551)
Q Consensus 88 ~~~l~~~~~v~~~P~~~lid~~G~i~ 113 (551)
...+++.|+|.++|++++++..+++.
T Consensus 81 ~~~~~~~~~i~~~Pt~~~~~~~~~~~ 106 (123)
T 1wou_A 81 NNDFRKNLKVTAVPTLLKYGTPQKLV 106 (123)
T ss_dssp TCHHHHHHCCCSSSEEEETTSSCEEE
T ss_pred hHHHHHHCCCCeeCEEEEEcCCceEe
Confidence 13588889999999999997644444
No 415
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.10 E-value=1.2e-11 Score=102.36 Aligned_cols=71 Identities=17% Similarity=0.117 Sum_probs=53.3
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
+||+|||+||++|+.+.+.+...++.......+.++.|+++.+.. ..++..|+|.++|
T Consensus 21 ~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~----------------------~~la~~~~V~g~P 78 (116)
T 3dml_A 21 RLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLP----------------------PGLELARPVTFTP 78 (116)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCC----------------------TTCBCSSCCCSSS
T ss_pred EEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCc----------------------hhHHHHCCCCCCC
Confidence 999999999999999987665443321110125688889886532 2466789999999
Q ss_pred EEEEEcCCCeEEEc
Q 008845 102 HLVILDENGKVLSD 115 (551)
Q Consensus 102 ~~~lid~~G~i~~~ 115 (551)
|+++++ +|+.+.+
T Consensus 79 T~i~f~-~G~ev~R 91 (116)
T 3dml_A 79 TFVLMA-GDVESGR 91 (116)
T ss_dssp EEEEEE-TTEEEEE
T ss_pred EEEEEE-CCEEEee
Confidence 999996 9998874
No 416
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.10 E-value=8.1e-11 Score=111.60 Aligned_cols=91 Identities=13% Similarity=0.136 Sum_probs=66.4
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
+++ |||+|||+||++|+.+.|.|.++++.+. .+.++.|+++. . .++..|+|
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~---~v~f~kVd~d~--~-----------------------~l~~~~~I 183 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP---MVKFCKIKASN--T-----------------------GAGDRFSS 183 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT---TSEEEEEEHHH--H-----------------------CCTTSSCT
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CCEEEEEeCCc--H-----------------------HHHHHCCC
Confidence 478 9999999999999999999999999986 47788777652 1 25678999
Q ss_pred CCCcEEEEEcCCCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHH
Q 008845 98 MGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQ 142 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 142 (551)
.++||++++ ++|+++..-.. ... .+ +..++.+.++.++..
T Consensus 184 ~~~PTll~~-~~G~~v~~~vG-~~~-~~--g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 184 DVLPTLLVY-KGGELLSNFIS-VTE-QL--AEEFFTGDVESFLNE 223 (245)
T ss_dssp TTCSEEEEE-ETTEEEEEETT-GGG-GS--CTTCCHHHHHHHHHT
T ss_pred CCCCEEEEE-ECCEEEEEEeC-Ccc-cc--cccccHHHHHHHHHH
Confidence 999999999 59998764111 111 11 112456667776643
No 417
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.09 E-value=4.1e-11 Score=101.65 Aligned_cols=70 Identities=31% Similarity=0.637 Sum_probs=56.2
Q ss_pred CCc-EEEEEecCCCH--------------hhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccC
Q 008845 19 KGK-IGLYFSASWCG--------------PCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 83 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~--------------~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 83 (551)
.|+ ++|+|||+||+ +|+.+.|.+.+++++++. ++.++.|+++.+.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~------------------ 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNP------------------ 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCT------------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCH------------------
Confidence 577 99999999999 999999999999988864 4888999988653
Q ss_pred ChhhHHHHHhhcCCCCCcEEEEEcCCCeEEEc
Q 008845 84 DSETRDKLDELFKVMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 115 (551)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 80 ------~l~~~~~v~~~Pt~~~~-~~G~~~~~ 104 (123)
T 1oaz_A 80 ------GTAPKYGIRGIPTLLLF-KNGEVAAT 104 (123)
T ss_dssp ------TTGGGGTCCBSSEEEEE-ESSSEEEE
T ss_pred ------HHHHHcCCCccCEEEEE-ECCEEEEE
Confidence 37899999999999999 89998763
No 418
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.07 E-value=2.7e-10 Score=116.46 Aligned_cols=72 Identities=21% Similarity=0.435 Sum_probs=61.5
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcC---CCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERN---ESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~---~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
+++++|+|||+||++|+++.|.+.++++.++... .++.++.|+++... .+++.|
T Consensus 22 ~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~-----------------------~l~~~~ 78 (382)
T 2r2j_A 22 ADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS-----------------------DIAQRY 78 (382)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH-----------------------HHHHHT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH-----------------------HHHHhc
Confidence 7899999999999999999999999999996431 24788888777654 689999
Q ss_pred CCCCcceEEEECCCCcEEE
Q 008845 416 KVSGIPMLVAIGPSGRTIT 434 (551)
Q Consensus 416 ~v~~~P~~~lid~~G~i~~ 434 (551)
+|+++||++++ ++|+++.
T Consensus 79 ~v~~~Pt~~~f-~~G~~~~ 96 (382)
T 2r2j_A 79 RISKYPTLKLF-RNGMMMK 96 (382)
T ss_dssp TCCEESEEEEE-ETTEEEE
T ss_pred CCCcCCEEEEE-eCCcEee
Confidence 99999999999 6888765
No 419
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.07 E-value=1.4e-10 Score=91.04 Aligned_cols=62 Identities=27% Similarity=0.480 Sum_probs=54.4
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
++|+||++||++|+.+.|.+.+++++++. ++.++.++++.+. .+++.|++.++|
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v~~~P 58 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENP------------------------QKAMEYGIMAVP 58 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSC------------------------CTTTSTTTCCSS
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCH------------------------HHHHHCCCcccC
Confidence 78999999999999999999999999873 5899999988653 377889999999
Q ss_pred EEEEEcCCCeE
Q 008845 102 HLVILDENGKV 112 (551)
Q Consensus 102 ~~~lid~~G~i 112 (551)
++++ +|++
T Consensus 59 t~~~---~G~~ 66 (85)
T 1fo5_A 59 TIVI---NGDV 66 (85)
T ss_dssp EEEE---TTEE
T ss_pred EEEE---CCEE
Confidence 9988 7876
No 420
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.07 E-value=9.8e-11 Score=91.91 Aligned_cols=62 Identities=21% Similarity=0.292 Sum_probs=54.0
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
.+|+||++||++|+.+.|.+.+++++++. ++.++.++++.+. .+++.|++.++|
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v~~~P 57 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDR------------------------EKAIEYGLMAVP 57 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCG------------------------GGGGGTCSSCSS
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCH------------------------HHHHhCCceeeC
Confidence 58899999999999999999999999874 4788888888654 377899999999
Q ss_pred EEEEEcCCCeE
Q 008845 102 HLVILDENGKV 112 (551)
Q Consensus 102 ~~~lid~~G~i 112 (551)
++++ +|++
T Consensus 58 t~~~---~G~~ 65 (85)
T 1nho_A 58 AIAI---NGVV 65 (85)
T ss_dssp EEEE---TTTE
T ss_pred EEEE---CCEE
Confidence 9988 7876
No 421
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.06 E-value=2e-09 Score=109.35 Aligned_cols=164 Identities=10% Similarity=0.106 Sum_probs=105.1
Q ss_pred CCcEEEEEEecCCCccchhh---h---HHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHH
Q 008845 178 EGKTIGLYFSMSSYKASAEF---T---PRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKL 251 (551)
Q Consensus 178 ~gk~v~l~f~~~~~~~c~~~---~---~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l 251 (551)
+++.+++.|+++||++|... . |.+..++..+++. . +.++.+|.+. .+.+
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~--~--v~~~~Vd~~~---------------------~~~l 83 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK--G--VGFGLVDSEK---------------------DAAV 83 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT--T--EEEEEEETTT---------------------THHH
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC--C--ceEEEEeCcc---------------------cHHH
Confidence 46889999999999996322 2 5777888887753 2 5566666654 5689
Q ss_pred HhhcCcCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecC--CC
Q 008845 252 ARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGK--NG 329 (551)
Q Consensus 252 ~~~f~v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~--~g 329 (551)
++.|+|+++||++++. +|+... ..| +.+.+.+.+++..... +.+ ..+.. +-
T Consensus 84 ~~~~~V~~~PTl~~f~-~G~~~~--------y~G----~~~~~~i~~~i~~~~~----~~v----------~~i~~~~~~ 136 (367)
T 3us3_A 84 AKKLGLTEEDSIYVFK-EDEVIE--------YDG----EFSADTLVEFLLDVLE----DPV----------ELIEGEREL 136 (367)
T ss_dssp HHHHTCCSTTEEEEEE-TTEEEE--------CCS----CCSHHHHHHHHHHHHS----CSE----------EECCSHHHH
T ss_pred HHHcCCCcCceEEEEE-CCcEEE--------eCC----CCCHHHHHHHHHHhcC----CCc----------EEcCCHHHH
Confidence 9999999999999996 454321 112 3467777777654321 000 01100 00
Q ss_pred CeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhH
Q 008845 330 GKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKA 409 (551)
Q Consensus 330 ~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 409 (551)
+.+ +. ...++++|.|+++||.. ..+.+.+++..+++. +.+..++ +.
T Consensus 137 ~~~-~~-~~~~~~vv~ff~~~~~~---~~~~f~~~A~~~~~~---~~F~~~~---~~----------------------- 182 (367)
T 3us3_A 137 QAF-EN-IEDEIKLIGYFKNKDSE---HYKAFKEAAEEFHPY---IPFFATF---DS----------------------- 182 (367)
T ss_dssp HHH-HH-CCSSCEEEEECSCTTCH---HHHHHHHHHHHHTTT---SCEEEEC---CH-----------------------
T ss_pred HHH-hc-cCCCcEEEEEECCCCch---HHHHHHHHHHhhcCC---cEEEEEC---CH-----------------------
Confidence 111 11 01467899999998764 456677788888754 5554432 22
Q ss_pred HHHHhcCCCCcceEEEECC
Q 008845 410 SLSRKFKVSGIPMLVAIGP 428 (551)
Q Consensus 410 ~l~~~~~v~~~P~~~lid~ 428 (551)
.+++.|+++. |+++++.+
T Consensus 183 ~~~~~~~v~~-p~i~lf~~ 200 (367)
T 3us3_A 183 KVAKKLTLKL-NEIDFYEA 200 (367)
T ss_dssp HHHHHHTCCT-TCEEEECT
T ss_pred HHHHHcCCCC-CeEEEEcC
Confidence 4788999986 99999966
No 422
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.06 E-value=4.7e-10 Score=86.23 Aligned_cols=62 Identities=18% Similarity=0.221 Sum_probs=51.7
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
+.|+||++||++|+.+.|.+.++++++.. ++.++.|+ + ..+++.|++.++|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~---~------------------------~~~~~~~~v~~~P 52 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK---E------------------------MDQILEAGLTALP 52 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC---S------------------------HHHHHHHTCSSSS
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec---C------------------------HHHHHHCCCCcCC
Confidence 35899999999999999999999998863 46777665 2 3488899999999
Q ss_pred EEEEEcCCCeEEEc
Q 008845 102 HLVILDENGKVLSD 115 (551)
Q Consensus 102 ~~~lid~~G~i~~~ 115 (551)
++++ +|+++..
T Consensus 53 t~~~---~G~~~~~ 63 (77)
T 1ilo_A 53 GLAV---DGELKIM 63 (77)
T ss_dssp CEEE---TTEEEEC
T ss_pred EEEE---CCEEEEc
Confidence 9988 7988764
No 423
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.06 E-value=1.6e-10 Score=118.86 Aligned_cols=71 Identities=15% Similarity=0.273 Sum_probs=60.3
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCC-----CeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHH
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNE-----SLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLS 412 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~-----~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~ 412 (551)
.+|++||+|||+||++|+.+.|.+.+++++++.... .+.++.|++|..+ .++
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~-----------------------~la 97 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV-----------------------DLC 97 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH-----------------------HHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH-----------------------HHH
Confidence 358999999999999999999999999999874311 4888888888664 689
Q ss_pred HhcCCCCcceEEEECCCCc
Q 008845 413 RKFKVSGIPMLVAIGPSGR 431 (551)
Q Consensus 413 ~~~~v~~~P~~~lid~~G~ 431 (551)
+.|+|.++||+++++++|.
T Consensus 98 ~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 98 RKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp HHTTCCSSCEEEEEEESSC
T ss_pred HHcCCCccCeEEEEECCCc
Confidence 9999999999999976654
No 424
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.05 E-value=4e-10 Score=86.61 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=51.8
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcc
Q 008845 342 ILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIP 421 (551)
Q Consensus 342 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P 421 (551)
..|+||++||++|+.+.|.++++++++..+ +.++.|+ +. ++++.|+|+++|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~---~~~~~v~---~~-----------------------~~~~~~~v~~~P 52 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGID---AEFEKIK---EM-----------------------DQILEAGLTALP 52 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCC---EEEEEEC---SH-----------------------HHHHHHTCSSSS
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCc---eEEEEec---CH-----------------------HHHHHCCCCcCC
Confidence 468999999999999999999998887643 6666664 22 578999999999
Q ss_pred eEEEECCCCcEEEc
Q 008845 422 MLVAIGPSGRTITK 435 (551)
Q Consensus 422 ~~~lid~~G~i~~~ 435 (551)
++++ +|+++.+
T Consensus 53 t~~~---~G~~~~~ 63 (77)
T 1ilo_A 53 GLAV---DGELKIM 63 (77)
T ss_dssp CEEE---TTEEEEC
T ss_pred EEEE---CCEEEEc
Confidence 9998 8998876
No 425
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.05 E-value=9.9e-10 Score=110.94 Aligned_cols=163 Identities=15% Similarity=0.181 Sum_probs=105.9
Q ss_pred CCcEEEEEEecCCCccchhhhHH-------HHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHH
Q 008845 178 EGKTIGLYFSMSSYKASAEFTPR-------LVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREK 250 (551)
Q Consensus 178 ~gk~v~l~f~~~~~~~c~~~~~~-------~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~ 250 (551)
+++.+++.|+++||+ |+.+.|. +.+++..+++. . +.++.+|.+. .+.
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--~--v~~~~Vd~~~---------------------~~~ 80 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--D--IGFVMVDAKK---------------------EAK 80 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS--S--EEEEEEETTT---------------------THH
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc--C--cEEEEEeCCC---------------------CHH
Confidence 568899999999999 9999998 88888888764 2 5555555553 457
Q ss_pred HHhhcCcCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccc-eec-CC
Q 008845 251 LARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDF-VVG-KN 328 (551)
Q Consensus 251 l~~~f~v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f-~~~-~~ 328 (551)
+++.|+|+++||++++ .+|+... ..| +.+.+.+.+++..... +.. .++ .+
T Consensus 81 l~~~~~v~~~Pt~~~~-~~g~~~~--------~~G----~~~~~~l~~~i~~~~~---------------~~~~~l~~~~ 132 (350)
T 1sji_A 81 LAKKLGFDEEGSLYVL-KGDRTIE--------FDG----EFAADVLVEFLLDLIE---------------DPVEIINSKL 132 (350)
T ss_dssp HHHHHTCCSTTEEEEE-ETTEEEE--------ECS----CCCHHHHHHHHHTTSS---------------CSEEECCSHH
T ss_pred HHHhcCCCccceEEEE-ECCcEEE--------ecC----CCCHHHHHHHHHHhcC---------------CcceeccchH
Confidence 8999999999999999 4454221 112 2356666665542111 111 111 00
Q ss_pred -CCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchh
Q 008845 329 -GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDAR 407 (551)
Q Consensus 329 -g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~ 407 (551)
-+.+ ++ ...+.++|.|+++||.. ..+.+.++++.+++. +.+..++ ++
T Consensus 133 ~~~~~-~~-~~~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~~---~~f~~~~---~~--------------------- 180 (350)
T 1sji_A 133 EVQAF-ER-IEDQIKLIGFFKSEESE---YYKAFEEAAEHFQPY---IKFFATF---DK--------------------- 180 (350)
T ss_dssp HHHHH-HH-CCSSCEEEEECSCTTSH---HHHHHHHHHHHTTTT---SEEEEEC---CH---------------------
T ss_pred HHHHH-hc-cCCCcEEEEEECCCCcH---HHHHHHHHHHhhccC---cEEEEEC---CH---------------------
Confidence 0000 11 12456788899998754 456788888888654 5555442 22
Q ss_pred hHHHHHhcCCCCcceEEEECCC
Q 008845 408 KASLSRKFKVSGIPMLVAIGPS 429 (551)
Q Consensus 408 ~~~l~~~~~v~~~P~~~lid~~ 429 (551)
.+++.|++. .|+++++.+.
T Consensus 181 --~~~~~~~v~-~p~i~~~~~~ 199 (350)
T 1sji_A 181 --GVAKKLSLK-MNEVDFYEPF 199 (350)
T ss_dssp --HHHHHHTCC-TTCEEEECTT
T ss_pred --HHHHHcCCC-CCcEEEEeCC
Confidence 588999999 9999999763
No 426
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.04 E-value=1.1e-10 Score=101.34 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=49.1
Q ss_pred EEEEEecCC--CHhhHhhhHHHHHHHHHhcCCCCEE--EEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 22 IGLYFSASW--CGPCQRFTPILAEVYNELSRQGDFE--VIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 22 vlv~F~a~w--C~~C~~~~p~l~~~~~~~~~~~~~~--vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
++|+||++| |++|+.++|.|.++++++ + ++. ++.|++|.. ..++++|+|
T Consensus 37 ~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~------------------------~~la~~~~V 89 (142)
T 2es7_A 37 GVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQS------------------------EAIGDRFNV 89 (142)
T ss_dssp EEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHH------------------------HHHHHTTTC
T ss_pred EEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCC------------------------HHHHHhcCC
Confidence 888999887 999999999999999998 3 466 777776633 358999999
Q ss_pred CCCcEEEEEcCCCeEEEc
Q 008845 98 MGIPHLVILDENGKVLSD 115 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~ 115 (551)
.++||++++ ++|+++.+
T Consensus 90 ~~iPT~~~f-k~G~~v~~ 106 (142)
T 2es7_A 90 RRFPATLVF-TDGKLRGA 106 (142)
T ss_dssp CSSSEEEEE-SCC----C
T ss_pred CcCCeEEEE-eCCEEEEE
Confidence 999999999 89988763
No 427
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.03 E-value=1.3e-10 Score=108.61 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=60.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
+|++|||+||++||++|+.+.|.|.++++++. ++.++.|+++ .+ .++..|+|
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~-~~-----------------------~l~~~~~i 170 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS-NT-----------------------GAGDRFSS 170 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH-HH-----------------------TCSTTSCG
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC-cH-----------------------HHHHHCCC
Confidence 46999999999999999999999999988874 4788888776 22 36788999
Q ss_pred CCcceEEEECCCCcEEEccc
Q 008845 418 SGIPMLVAIGPSGRTITKEA 437 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~~~ 437 (551)
.++||++++ ++|+++.+..
T Consensus 171 ~~~PTl~~~-~~G~~v~~~~ 189 (217)
T 2trc_P 171 DVLPTLLVY-KGGELISNFI 189 (217)
T ss_dssp GGCSEEEEE-ETTEEEEEET
T ss_pred CCCCEEEEE-ECCEEEEEEe
Confidence 999999999 5999887643
No 428
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.03 E-value=1.5e-10 Score=108.21 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=66.8
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
+|+ |+|+||++||++|+.+.|.|.++++.+. .+.++.|+++ + ..++..|+|
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~---~v~f~~vd~~-~------------------------~~l~~~~~i 170 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP---MVKFCKIRAS-N------------------------TGAGDRFSS 170 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT---TSEEEEEEHH-H------------------------HTCSTTSCG
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC---CeEEEEEECC-c------------------------HHHHHHCCC
Confidence 468 9999999999999999999999999885 4788888776 2 236788999
Q ss_pred CCCcEEEEEcCCCeEEEcC-cchhhhhcCCCCCCchHHHHHHHHH
Q 008845 98 MGIPHLVILDENGKVLSDG-GVEIIREYGVEGYPFTVERIKEMKE 141 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~ 141 (551)
.++||++++ ++|+++..- |.. ..+ +..++.+.++.++.
T Consensus 171 ~~~PTl~~~-~~G~~v~~~~G~~---~~~--g~~~~~~~Le~~L~ 209 (217)
T 2trc_P 171 DVLPTLLVY-KGGELISNFISVA---EQF--AEDFFAADVESFLN 209 (217)
T ss_dssp GGCSEEEEE-ETTEEEEEETTGG---GGS--CSSCCHHHHHHHHH
T ss_pred CCCCEEEEE-ECCEEEEEEeCCc---ccC--cccCCHHHHHHHHH
Confidence 999999999 699887641 211 111 12345567777663
No 429
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.58 E-value=3e-11 Score=98.97 Aligned_cols=69 Identities=32% Similarity=0.684 Sum_probs=58.2
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ ++|+||++||++|+.+.|.+.++++.++. ++.++.|+++.+ ..+++.|++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~------------------------~~~~~~~~v 71 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDEN------------------------PNTAAQYGI 71 (106)
Confidence 467 99999999999999999999999998864 467777776643 248889999
Q ss_pred CCCcEEEEEcCCCeEEE
Q 008845 98 MGIPHLVILDENGKVLS 114 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~ 114 (551)
.++|+++++ ++|+++.
T Consensus 72 ~~~Pt~~~~-~~g~~~~ 87 (106)
T 2yj7_A 72 RSIPTLLLF-KNGQVVD 87 (106)
Confidence 999999999 7888765
No 430
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.99 E-value=1.4e-09 Score=115.52 Aligned_cols=69 Identities=22% Similarity=0.501 Sum_probs=60.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.+++++|+|||+||++|+++.|.+.++++.+++. ++.++.|+++..+ .+++.|+|
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--~v~~~~vd~~~~~-----------------------~l~~~~~v 84 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK--NITLAQIDCTENQ-----------------------DLCMEHNI 84 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--TCEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC--CeEEEEEECCCCH-----------------------HHHHhcCC
Confidence 3899999999999999999999999999998764 4888888887664 69999999
Q ss_pred CCcceEEEECCCCcE
Q 008845 418 SGIPMLVAIGPSGRT 432 (551)
Q Consensus 418 ~~~P~~~lid~~G~i 432 (551)
+++||++++. +|+.
T Consensus 85 ~~~Pt~~~~~-~g~~ 98 (504)
T 2b5e_A 85 PGFPSLKIFK-NSDV 98 (504)
T ss_dssp CSSSEEEEEE-TTCT
T ss_pred CcCCEEEEEe-CCcc
Confidence 9999999995 5663
No 431
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.99 E-value=6.8e-10 Score=114.25 Aligned_cols=67 Identities=15% Similarity=0.224 Sum_probs=58.3
Q ss_pred Cc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCC------CEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHH
Q 008845 20 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG------DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLD 92 (551)
Q Consensus 20 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~------~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (551)
++ +||+|||+||++|+.++|.+.++++++.... .+.++.|+++... .++
T Consensus 42 ~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~------------------------~la 97 (470)
T 3qcp_A 42 LCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV------------------------DLC 97 (470)
T ss_dssp GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH------------------------HHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH------------------------HHH
Confidence 47 9999999999999999999999999997432 4889999988764 489
Q ss_pred hhcCCCCCcEEEEEcCCC
Q 008845 93 ELFKVMGIPHLVILDENG 110 (551)
Q Consensus 93 ~~~~v~~~P~~~lid~~G 110 (551)
+.|+|.++||+++++++|
T Consensus 98 ~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 98 RKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp HHTTCCSSCEEEEEEESS
T ss_pred HHcCCCccCeEEEEECCC
Confidence 999999999999996554
No 432
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.94 E-value=7.4e-11 Score=100.83 Aligned_cols=70 Identities=29% Similarity=0.606 Sum_probs=59.1
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
..++ ++|+||++||++|+.+.|.|.++++.++ ++.++.|+++... .+++.|+
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~------------------------~~~~~~~ 86 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELK------------------------EVAEKYN 86 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSG------------------------GGHHHHT
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchH------------------------HHHHHcC
Confidence 3588 9999999999999999999999999886 4777887777543 4888999
Q ss_pred CCCCcEEEEEcCCCeEEEc
Q 008845 97 VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~~ 115 (551)
+.++|+++++ ++|+++.+
T Consensus 87 v~~~Pt~~~~-~~g~~~~~ 104 (130)
T 1wmj_A 87 VEAMPTFLFI-KDGAEADK 104 (130)
T ss_dssp CCSSCCCCBC-TTTTCCBC
T ss_pred CCccceEEEE-eCCeEEEE
Confidence 9999998888 78887653
No 433
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.92 E-value=3.3e-09 Score=92.91 Aligned_cols=73 Identities=12% Similarity=0.256 Sum_probs=55.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 415 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 415 (551)
+|+|+|+|+++||++|+.+.... .++.+.+.+. +.++.++++... ...+.+.|
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~---fv~v~~d~~~~~---------------------~~~l~~~y 97 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREH---FIFWQVYHDSEE---------------------GQRYIQFY 97 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHT---EEEEEEESSSHH---------------------HHHHHHHH
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcC---eEEEEEecCCHh---------------------HHHHHHHc
Confidence 89999999999999999986554 3344444443 666767664321 24688999
Q ss_pred CCCCcceEEEECCC-CcEEEc
Q 008845 416 KVSGIPMLVAIGPS-GRTITK 435 (551)
Q Consensus 416 ~v~~~P~~~lid~~-G~i~~~ 435 (551)
++.++|++++||++ |+.+..
T Consensus 98 ~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 98 KLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp TCCSSSEEEEECTTTCCCCEE
T ss_pred CCCCCCEEEEEeCCCCcEeee
Confidence 99999999999998 876654
No 434
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.91 E-value=3e-08 Score=104.52 Aligned_cols=170 Identities=16% Similarity=0.193 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCC----CCcEEEEEcCCCe
Q 008845 37 FTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM----GIPHLVILDENGK 111 (551)
Q Consensus 37 ~~p~l~~~~~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~----~~P~~~lid~~G~ 111 (551)
....+.+++++++.++ .+.++.++.+... ...+.||+. ..|.+++++.++.
T Consensus 255 ~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~------------------------~~l~~~gl~~~~~~~P~~~i~~~~~~ 310 (481)
T 3f8u_A 255 WRNRVMMVAKKFLDAGHKLNFAVASRKTFS------------------------HELSDFGLESTAGEIPVVAIRTAKGE 310 (481)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETTTTH------------------------HHHGGGTCCCCTTCSCEEEEECSSSC
T ss_pred HHHHHHHHHHHhcCCCceEEEEEEcHHHHH------------------------HHHHHcCCCcccCCCcEEEEEcCCCc
Confidence 4677888888888642 3677776665432 356788887 5899999986554
Q ss_pred EEEcCcchhhhhcCCCCCCchHH--HHHHHHHHHHHHHhhcccccccccCCc-----ceeecCCCceeecc-ccCCcEEE
Q 008845 112 VLSDGGVEIIREYGVEGYPFTVE--RIKEMKEQEERAKREQSLRSVLTSHSR-----DFVISSDGRKISVS-DLEGKTIG 183 (551)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~~~~~~~~~~~-~~~gk~v~ 183 (551)
..... -.++.+ .++++++...... +...+.+... ..+...+++.+... ..+++.++
T Consensus 311 ky~~~------------~~~t~e~~~l~~f~~~~~~g~----~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vl 374 (481)
T 3f8u_A 311 KFVMQ------------EEFSRDGKALERFLQDYFDGN----LKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVL 374 (481)
T ss_dssp EEECC------------SCCCTTSHHHHHHHHHHHHTC----CCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEE
T ss_pred ccCCC------------cccCccHHHHHHHHHHHhcCC----cccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEE
Confidence 33211 123445 6777776543322 2222222111 11212222222211 22589999
Q ss_pred EEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcCcCCcceE
Q 008845 184 LYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELSTLPTL 263 (551)
Q Consensus 184 l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~v~~~P~l 263 (551)
++|+++||++|+.+.|.+.++++.+.+.. + ++++.+|.+. . .+.+.|++.++||+
T Consensus 375 v~f~a~wC~~C~~~~p~~~~l~~~~~~~~-~--v~~~~id~~~---------------------~-~~~~~~~v~~~Pt~ 429 (481)
T 3f8u_A 375 IEFYAPWCGHCKNLEPKYKELGEKLSKDP-N--IVIAKMDATA---------------------N-DVPSPYEVRGFPTI 429 (481)
T ss_dssp EEEECTTBHHHHHHHHHHHHHHHHTTTCS-S--EEEEEEETTS---------------------S-CCCTTCCCCSSSEE
T ss_pred EEEecCcChhHHHhhHHHHHHHHHhccCC-C--EEEEEEECCc---------------------h-hhHhhCCCcccCEE
Confidence 99999999999999999999999987642 2 5666666543 1 34578999999999
Q ss_pred EEECCCCC
Q 008845 264 VIIGPDGK 271 (551)
Q Consensus 264 vi~~~~gk 271 (551)
++++.+++
T Consensus 430 ~~~~~~~~ 437 (481)
T 3f8u_A 430 YFSPANKK 437 (481)
T ss_dssp EEECTTCT
T ss_pred EEEeCCCe
Confidence 99987766
No 435
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.81 E-value=8.3e-09 Score=81.13 Aligned_cols=58 Identities=22% Similarity=0.415 Sum_probs=46.1
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcce
Q 008845 343 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 422 (551)
Q Consensus 343 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~ 422 (551)
++.||++||++|+...|.|.++...+ +..|++|.++ ++++.|+++ +|+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~~-----------------------~l~~~~g~~-vPt 50 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDDA-----------------------ALESAYGLR-VPV 50 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTCH-----------------------HHHHHHTTT-CSE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCCH-----------------------HHHHHhCCC-cCe
Confidence 68899999999999999886643221 4568888775 578889998 999
Q ss_pred EEEECCCCcEEE
Q 008845 423 LVAIGPSGRTIT 434 (551)
Q Consensus 423 ~~lid~~G~i~~ 434 (551)
+++ .+|+.+.
T Consensus 51 l~~--~~G~~v~ 60 (87)
T 1ttz_A 51 LRD--PMGRELD 60 (87)
T ss_dssp EEC--TTCCEEE
T ss_pred EEE--ECCEEEe
Confidence 988 6798874
No 436
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.80 E-value=1.5e-08 Score=82.54 Aligned_cols=63 Identities=19% Similarity=0.338 Sum_probs=53.7
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
+++.||++||++|+...|.|.++++++. +.+..|+++.+.+ +..+|+++ +|
T Consensus 31 ~vv~y~~~~C~~C~~a~~~L~~l~~e~~----i~~~~vDId~d~~------------------------l~~~ygv~-VP 81 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEMIASLRVLQKKSW----FELEVINIDGNEH------------------------LTRLYNDR-VP 81 (107)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHHSC----CCCEEEETTTCHH------------------------HHHHSTTS-CS
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHhcC----CeEEEEECCCCHH------------------------HHHHhCCC-Cc
Confidence 7899999999999999999999988863 6778889987654 77889997 99
Q ss_pred EEEEEcCCCeEEE
Q 008845 102 HLVILDENGKVLS 114 (551)
Q Consensus 102 ~~~lid~~G~i~~ 114 (551)
+++++ .+|+.+.
T Consensus 82 ~l~~~-~dG~~v~ 93 (107)
T 2fgx_A 82 VLFAV-NEDKELC 93 (107)
T ss_dssp EEEET-TTTEEEE
T ss_pred eEEEE-ECCEEEE
Confidence 99887 6888773
No 437
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.79 E-value=4.9e-09 Score=96.31 Aligned_cols=117 Identities=20% Similarity=0.277 Sum_probs=71.1
Q ss_pred HHHHHhhcCcCCcceEEEECCCCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCC-ccceec
Q 008845 248 REKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGD-LDFVVG 326 (551)
Q Consensus 248 ~~~l~~~f~v~~~P~lvi~~~~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~f~~~ 326 (551)
....++.+||+++|++++ +|++..... +++.+.+..|.+.... ..+.+.+...+.. ..++.+
T Consensus 39 ~~~~a~~~gi~gvP~fvi---ngk~~~~~~------------~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~~~~g 101 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV---NGKYQLNPQ------------GMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQYEDG 101 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE---TTTEEECGG------------GSCCSSHHHHHHHHHH--HHHHHTC---------CCBT
T ss_pred HHHHHHHcCCCcCCEEEE---cceEecCcc------------ccccccHHHHHHHHHH--HHHHHHhCcccccccccCCC
Confidence 456789999999999976 556543211 1233445555444433 3334443333222 123334
Q ss_pred CCCCeeecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCC
Q 008845 327 KNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRD 385 (551)
Q Consensus 327 ~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~vv~vs~d~~ 385 (551)
.+...+... ..++++||.||+.|||+|+.+.|.| .++.++++++ +.+..+.++..
T Consensus 102 ~~y~~l~~p-~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~---v~~~~~~v~~~ 159 (197)
T 1un2_A 102 KQYTTLEKP-VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEG---VKMTKYHVNFM 159 (197)
T ss_dssp TTEEECSSC-CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTT---CCEEEEECSSS
T ss_pred CCceEccCC-CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCC---CEEEEeccCcC
Confidence 444333221 2478999999999999999999998 8887777654 88888888753
No 438
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.78 E-value=8.5e-09 Score=88.51 Aligned_cols=67 Identities=9% Similarity=0.109 Sum_probs=58.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
+++|+|+|||+ |++|+.+.|.|.+++++|+++ +.++.|++|..+ .++..|||+
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk---~~f~~vd~d~~~-----------------------~~a~~~gi~ 75 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGV---INFGTIDAKAFG-----------------------AHAGNLNLK 75 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT---SEEEEECTTTTG-----------------------GGTTTTTCC
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe---EEEEEEchHHhH-----------------------HHHHHcCCC
Confidence 57899999999 899999999999999999876 889999888664 478999999
Q ss_pred C--cceEEEECC-CCcE
Q 008845 419 G--IPMLVAIGP-SGRT 432 (551)
Q Consensus 419 ~--~P~~~lid~-~G~i 432 (551)
+ +|++++++. +|+.
T Consensus 76 ~~~iPtl~i~~~~~g~~ 92 (133)
T 2djk_A 76 TDKFPAFAIQEVAKNQK 92 (133)
T ss_dssp SSSSSEEEEECTTTCCB
T ss_pred cccCCEEEEEecCcCcc
Confidence 9 999999964 4665
No 439
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.78 E-value=1.6e-08 Score=82.39 Aligned_cols=64 Identities=22% Similarity=0.410 Sum_probs=54.0
Q ss_pred EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCc
Q 008845 341 TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGI 420 (551)
Q Consensus 341 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~ 420 (551)
.+|+.||++||++|+...|.|.++.+++. +.+..|++|.++ +++..|+++ +
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-----i~~~~vDId~d~-----------------------~l~~~ygv~-V 80 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-----FELEVINIDGNE-----------------------HLTRLYNDR-V 80 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-----CCCEEEETTTCH-----------------------HHHHHSTTS-C
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-----CeEEEEECCCCH-----------------------HHHHHhCCC-C
Confidence 56899999999999999999999877752 677888888775 478889997 9
Q ss_pred ceEEEECCCCcEEE
Q 008845 421 PMLVAIGPSGRTIT 434 (551)
Q Consensus 421 P~~~lid~~G~i~~ 434 (551)
|+++++ .+|+.+.
T Consensus 81 P~l~~~-~dG~~v~ 93 (107)
T 2fgx_A 81 PVLFAV-NEDKELC 93 (107)
T ss_dssp SEEEET-TTTEEEE
T ss_pred ceEEEE-ECCEEEE
Confidence 999887 5788874
No 440
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.77 E-value=1.7e-08 Score=92.77 Aligned_cols=43 Identities=28% Similarity=0.363 Sum_probs=38.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 383 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d 383 (551)
.++++|+.||++|||+|+.+.|.+.++.+++.++ +.++.+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQD---VVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCC---eEEEEEecc
Confidence 4799999999999999999999999998887654 888888886
No 441
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.76 E-value=5.4e-08 Score=91.72 Aligned_cols=192 Identities=14% Similarity=0.145 Sum_probs=121.7
Q ss_pred Cc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCC
Q 008845 20 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM 98 (551)
Q Consensus 20 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 98 (551)
.+ ++|-|+++|| ..+.+.+.++++.+. ++.+... . + ..+++.|++.
T Consensus 27 ~~v~vVgff~~~~---~~~~~~f~~~A~~l~---~~~F~~t-~--~------------------------~~v~~~~~v~ 73 (227)
T 4f9z_D 27 TEVAVIGFFQDLE---IPAVPILHSMVQKFP---GVSFGIS-T--D------------------------SEVLTHYNIT 73 (227)
T ss_dssp SSEEEEEECSCSC---STHHHHHHHHTTTCT---TSEEEEE-C--C------------------------HHHHHHTTCC
T ss_pred CCeEEEEEecCCC---chhHHHHHHHHHhCC---CceEEEE-C--C------------------------HHHHHHcCCC
Confidence 45 8888999985 678999999999884 3555432 1 2 2488889999
Q ss_pred CCcEEEEEcCCC-eEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCceee-ccc
Q 008845 99 GIPHLVILDENG-KVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKIS-VSD 176 (551)
Q Consensus 99 ~~P~~~lid~~G-~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~ 176 (551)
+ |+++++.+.. +.....+.. .| +++.+.|.+++.. ...+.+...+.+... +.+
T Consensus 74 ~-p~i~lfk~~~~~~~~~~~~~----~g----~~~~~~l~~fi~~----------------~~~plv~e~t~~n~~~~~~ 128 (227)
T 4f9z_D 74 G-NTICLFRLVDNEQLNLEDED----IE----SIDATKLSRFIEI----------------NSLHMVTEYNPVTVIGLFN 128 (227)
T ss_dssp S-SEEEEEETTTTEEEEECHHH----HH----TCCHHHHHHHHHH----------------HCCCSEEECCHHHHHHHHH
T ss_pred C-CeEEEEEecCcccccccccc----cC----CCCHHHHHHHHHH----------------hCCCceeecCcccHHHHhc
Confidence 8 9999985422 211111100 01 1344555555533 223333333322211 111
Q ss_pred cCCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcC
Q 008845 177 LEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFE 256 (551)
Q Consensus 177 ~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~ 256 (551)
...+.+.++|..+||+.|..+.+.+.+++++++++ +.|+.+|.+.. .+++++++||
T Consensus 129 ~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-----i~F~~vd~~~~-------------------~~~~~l~~fg 184 (227)
T 4f9z_D 129 SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-----ILFILVDSGMK-------------------ENGKVISFFK 184 (227)
T ss_dssp SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-----CEEEEEETTSG-------------------GGHHHHHHTT
T ss_pred cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-----EEEEEeCCccH-------------------hHHHHHHHcC
Confidence 22255667788889999999999999999999876 56666666421 1456789999
Q ss_pred cC--CcceEEEECCCCC--cccccchhhhhhcCCCCCCCChhhHHHHHHHHHH
Q 008845 257 LS--TLPTLVIIGPDGK--TLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRA 305 (551)
Q Consensus 257 v~--~~P~lvi~~~~gk--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 305 (551)
+. ++|++++++..+. +.... -.++.+.+.+|++...+
T Consensus 185 l~~~~~P~~~i~~~~~~~ky~~~~------------~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 185 LKESQLPALAIYQTLDDEWDTLPT------------AEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp CCGGGCSEEEEEESSSCCEEEETT------------CCCCHHHHHHHHHHHHT
T ss_pred CCcccCCEEEEEECCCCccccCCc------------CCCCHHHHHHHHHHHhC
Confidence 98 7999999985432 22211 14689999999987654
No 442
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=98.75 E-value=2.5e-08 Score=90.08 Aligned_cols=100 Identities=16% Similarity=0.321 Sum_probs=82.2
Q ss_pred ceeeccc-CCCc-EEEEEe-cCCCHhhH-hhhHHHHHHHHHh-cCCCCE-EEEEEeCCCCHHHHHHHHhhCCCC-ccccC
Q 008845 11 LRVKLDS-LKGK-IGLYFS-ASWCGPCQ-RFTPILAEVYNEL-SRQGDF-EVIFVSGDEDDEAFKGYFSKMPWL-AVPFS 83 (551)
Q Consensus 11 ~~v~l~~-~~gk-vlv~F~-a~wC~~C~-~~~p~l~~~~~~~-~~~~~~-~vv~v~~d~~~~~~~~~~~~~~~~-~~~~~ 83 (551)
+.+++++ ++|| +||+|| +.|||.|. .+++.|++.+.++ +..| + .|+.|+.| +....++|.++.+.. +..++
T Consensus 33 ~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g-~~~V~gvS~D-~~~~~~~~~~~~~~~~f~lLs 110 (182)
T 1xiy_A 33 TSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN-FDDIYCITNN-DIYVLKSWFKSMDIKKIKYIS 110 (182)
T ss_dssp EEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC-CSEEEEEESS-CHHHHHHHHHHTTCCSSEEEE
T ss_pred eeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEeCC-CHHHHHHHHHHcCCCCceEEE
Confidence 6899998 6999 888887 78999999 9999999999999 8775 7 49999998 677888998888863 44566
Q ss_pred ChhhHHHHHhhcCCC-----------CCcEEEEEcCCCeEEEc
Q 008845 84 DSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 84 ~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 115 (551)
|.+ ..+++.||+. ....++||| +|+|+..
T Consensus 111 D~~--~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~ 150 (182)
T 1xiy_A 111 DGN--SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKM 150 (182)
T ss_dssp CTT--SHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEE
T ss_pred eCc--hHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEE
Confidence 654 4689999873 246789998 9999885
No 443
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.72 E-value=3e-08 Score=77.92 Aligned_cols=58 Identities=21% Similarity=0.281 Sum_probs=46.4
Q ss_pred EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCcE
Q 008845 23 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 102 (551)
Q Consensus 23 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 102 (551)
++.||++||++|+.+.|.|.++..++ +..|+++.+.+ +.++|+++ +|+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~------------------------l~~~~g~~-vPt 50 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAA------------------------LESAYGLR-VPV 50 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHH------------------------HHHHHTTT-CSE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHH------------------------HHHHhCCC-cCe
Confidence 67899999999999999998764322 45678887654 78889998 999
Q ss_pred EEEEcCCCeEEE
Q 008845 103 LVILDENGKVLS 114 (551)
Q Consensus 103 ~~lid~~G~i~~ 114 (551)
+++ .+|+.+.
T Consensus 51 l~~--~~G~~v~ 60 (87)
T 1ttz_A 51 LRD--PMGRELD 60 (87)
T ss_dssp EEC--TTCCEEE
T ss_pred EEE--ECCEEEe
Confidence 887 6788773
No 444
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=98.72 E-value=2.2e-08 Score=89.21 Aligned_cols=100 Identities=10% Similarity=0.204 Sum_probs=82.1
Q ss_pred ceeeccc-CCCc-EEEEEe-cCCCHhhHhhhHHHHHHHHHhcCCCCEE-EEEEeCCCCHHHHHHHHhhCCC--CccccCC
Q 008845 11 LRVKLDS-LKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFE-VIFVSGDEDDEAFKGYFSKMPW--LAVPFSD 84 (551)
Q Consensus 11 ~~v~l~~-~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~~~~~-vv~v~~d~~~~~~~~~~~~~~~--~~~~~~~ 84 (551)
+.++|++ ++|| +||+|| +.|||.|..+++.|++.+.++++.| +. |+.||+| +....++|.++.+. ....++|
T Consensus 32 ~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g-v~~VigIS~D-~~~~~~~w~~~~~~~~~f~lLSD 109 (171)
T 2xhf_A 32 KSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG-YHTIACIAVN-DPFVMAAWGKTVDPEHKIRMLAD 109 (171)
T ss_dssp CEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT-CCEEEEEESS-CHHHHHHHHHHHCTTCCSEEEEC
T ss_pred cEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC-CCEEEEEeCC-CHHHHHHHHHhcCCCCCeEEEEe
Confidence 7999999 5999 888888 6899999999999999999998875 75 9999999 67778888887776 4445666
Q ss_pred hhhHHHHHhhcCCC-----------CCcEEEEEcCCCeEEEc
Q 008845 85 SETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 115 (551)
Q Consensus 85 ~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 115 (551)
.+ .++++.||+. ....++||| +|+|+..
T Consensus 110 ~~--~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~ 148 (171)
T 2xhf_A 110 MH--GEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSV 148 (171)
T ss_dssp TT--SHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEE
T ss_pred CC--chHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEE
Confidence 54 4689999874 246789998 9999875
No 445
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.71 E-value=1.6e-07 Score=87.79 Aligned_cols=91 Identities=21% Similarity=0.335 Sum_probs=59.6
Q ss_pred cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---Ch----------------HHHHHHHh
Q 008845 334 VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQ----------------TSFDEFFK 394 (551)
Q Consensus 334 l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~---~~----------------~~~~~~~~ 394 (551)
+....++++|+.||++|||+|+++.|.|.++.+. ++.++++.... .+ ..+.+++.
T Consensus 81 ~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 154 (216)
T 1eej_A 81 YKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMA 154 (216)
T ss_dssp ECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHT
T ss_pred ecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC------CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHh
Confidence 3344589999999999999999999999887542 37777765531 11 12333333
Q ss_pred cCCCc--ccccCchhhHHHHHhcCCCCcceEEEECCCCcE
Q 008845 395 GMPWL--ALPFGDARKASLSRKFKVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 395 ~~~~~--~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 432 (551)
..+.. ......+....+++.|||+++|++++. +|+.
T Consensus 155 ~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~~ 192 (216)
T 1eej_A 155 GKSVAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGTL 192 (216)
T ss_dssp TCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSCE
T ss_pred CCCCChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCeE
Confidence 33210 122334566788999999999999653 5654
No 446
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.69 E-value=1.1e-08 Score=79.37 Aligned_cols=65 Identities=22% Similarity=0.317 Sum_probs=48.1
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcce
Q 008845 343 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 422 (551)
Q Consensus 343 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~ 422 (551)
++.||++|||+|+++.|.|+++.+++. +.+..+.+|.+.+ ..++++.||++++|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~-----~~~~~~~v~~~~~--------------------~~~~~~~~gv~~vPt 58 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK-----YTVEIVHLGTDKA--------------------RIAEAEKAGVKSVPA 58 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT-----EEEEEEETTTCSS--------------------THHHHHHHTCCEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC-----CeEEEEEecCChh--------------------hHHHHHHcCCCcCCE
Confidence 667999999999999999988765542 4555666664311 125778899999999
Q ss_pred EEEECCCCcEEEc
Q 008845 423 LVAIGPSGRTITK 435 (551)
Q Consensus 423 ~~lid~~G~i~~~ 435 (551)
+++ +|+++..
T Consensus 59 ~~i---~g~~~~~ 68 (80)
T 2k8s_A 59 LVI---DGAAFHI 68 (80)
T ss_dssp EEE---TTEEEEE
T ss_pred EEE---CCEEEEe
Confidence 877 7887654
No 447
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.69 E-value=1.9e-07 Score=83.94 Aligned_cols=50 Identities=14% Similarity=0.250 Sum_probs=38.9
Q ss_pred CCeeecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 008845 329 GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS 382 (551)
Q Consensus 329 g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~ 382 (551)
+....+.+-.++++|+.||++|||+|+.+.|.|.++.+++. ++.+++..+
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~----~v~~~~~~~ 61 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP----NVRLVYREW 61 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEEC
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC----CEEEEEEeC
Confidence 33445555568999999999999999999999999887754 266666654
No 448
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.69 E-value=2.1e-08 Score=77.65 Aligned_cols=64 Identities=23% Similarity=0.302 Sum_probs=47.5
Q ss_pred EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCcE
Q 008845 23 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 102 (551)
Q Consensus 23 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 102 (551)
++.||++|||+|+.+.|.+.++.+++ ++.+..++++.+.+ ...+.+.|++.++|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~----~~~~~~~~v~~~~~---------------------~~~~~~~~gv~~vPt 58 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS----KYTVEIVHLGTDKA---------------------RIAEAEKAGVKSVPA 58 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT----TEEEEEEETTTCSS---------------------THHHHHHHTCCEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc----CCeEEEEEecCChh---------------------hHHHHHHcCCCcCCE
Confidence 66799999999999999999886554 25566666664311 024678899999999
Q ss_pred EEEEcCCCeEEE
Q 008845 103 LVILDENGKVLS 114 (551)
Q Consensus 103 ~~lid~~G~i~~ 114 (551)
+++ +|+++.
T Consensus 59 ~~i---~g~~~~ 67 (80)
T 2k8s_A 59 LVI---DGAAFH 67 (80)
T ss_dssp EEE---TTEEEE
T ss_pred EEE---CCEEEE
Confidence 876 787654
No 449
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.64 E-value=3.4e-08 Score=84.73 Aligned_cols=106 Identities=16% Similarity=0.202 Sum_probs=81.5
Q ss_pred CCcEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcCc
Q 008845 178 EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFEL 257 (551)
Q Consensus 178 ~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~v 257 (551)
.+.+++++|+++ |++|+.+.|.+.+++++++++ +.|+.+|.++ +..++++|||
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-----~~f~~vd~d~---------------------~~~~a~~~gi 74 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-----INFGTIDAKA---------------------FGAHAGNLNL 74 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-----SEEEEECTTT---------------------TGGGTTTTTC
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-----EEEEEEchHH---------------------hHHHHHHcCC
Confidence 346788999999 799999999999999998876 6666666654 4568899999
Q ss_pred CC--cceEEEECC-CCCcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCC
Q 008845 258 ST--LPTLVIIGP-DGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGD 320 (551)
Q Consensus 258 ~~--~P~lvi~~~-~gk~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 320 (551)
+. +|++++++. +|+..... . .-.++.+.+.++++...++...+.++|+.++..
T Consensus 75 ~~~~iPtl~i~~~~~g~~~~~~-~---------~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~ 130 (133)
T 2djk_A 75 KTDKFPAFAIQEVAKNQKFPFD-Q---------EKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEK 130 (133)
T ss_dssp CSSSSSEEEEECTTTCCBCCCC-S---------SSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTT
T ss_pred CcccCCEEEEEecCcCcccCCC-C---------ccccCHHHHHHHHHHHHcCCcCccccCCCCCCc
Confidence 98 999999975 45432110 0 013578899999999999999999998877553
No 450
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.64 E-value=6e-08 Score=84.85 Aligned_cols=73 Identities=21% Similarity=0.294 Sum_probs=53.7
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
-+|| |+|+|+++||..|+.+.... .++.+.+++ ++.++.++++.... ..+.+
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~----------------------~~l~~ 95 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEG----------------------QRYIQ 95 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHH----------------------HHHHH
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhH----------------------HHHHH
Confidence 3589 99999999999999985443 334444432 46677777753222 46888
Q ss_pred hcCCCCCcEEEEEcCC-CeEEE
Q 008845 94 LFKVMGIPHLVILDEN-GKVLS 114 (551)
Q Consensus 94 ~~~v~~~P~~~lid~~-G~i~~ 114 (551)
.|++.++|+++++|++ |+.+.
T Consensus 96 ~y~v~~~P~~~fld~~~G~~l~ 117 (153)
T 2dlx_A 96 FYKLGDFPYVSILDPRTGQKLV 117 (153)
T ss_dssp HHTCCSSSEEEEECTTTCCCCE
T ss_pred HcCCCCCCEEEEEeCCCCcEee
Confidence 9999999999999998 76554
No 451
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.64 E-value=3.4e-07 Score=97.38 Aligned_cols=68 Identities=15% Similarity=0.178 Sum_probs=58.4
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
.++..++.||++|||+|+.+.|.|+++...+. ++.+..|++|..+ ++++.|+|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~~-----------------------~~~~~~~i 168 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTFQ-----------------------NEITERNV 168 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhhH-----------------------HHHHHhCC
Confidence 36788999999999999999999999877764 3888888888665 68999999
Q ss_pred CCcceEEEECCCCcEEEc
Q 008845 418 SGIPMLVAIGPSGRTITK 435 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~~ 435 (551)
+++|++++ +|+.+..
T Consensus 169 ~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 169 MGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp CSSSEEEE---TTEEEEE
T ss_pred CccCEEEE---CCEEEec
Confidence 99999977 7888765
No 452
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.59 E-value=2.9e-07 Score=87.25 Aligned_cols=67 Identities=12% Similarity=0.205 Sum_probs=54.4
Q ss_pred CCEEEEEEe--cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC--ChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 339 GKTILLYFS--AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR--DQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 339 gk~vll~F~--a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~--~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
+++|||+|| ||||+ +.|.|.++++.++....++.|+.|++|. .. .+..+++.
T Consensus 33 ~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~--------------------~n~~la~~ 88 (248)
T 2c0g_A 33 FPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGEL--------------------ENKALGDR 88 (248)
T ss_dssp SSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTC--------------------TTHHHHHH
T ss_pred CCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccc--------------------ccHHHHHH
Confidence 689999999 99999 9999999999997511358888888776 10 01369999
Q ss_pred cCCC--CcceEEEECCCCc
Q 008845 415 FKVS--GIPMLVAIGPSGR 431 (551)
Q Consensus 415 ~~v~--~~P~~~lid~~G~ 431 (551)
|+|+ ++||++++. |+
T Consensus 89 ~~V~~~~~PTl~~F~--G~ 105 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK--GN 105 (248)
T ss_dssp TTCCTTSCCEEEEES--SS
T ss_pred hCCCcCCCCeEEEEe--CC
Confidence 9999 999999994 76
No 453
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.59 E-value=3.1e-07 Score=82.59 Aligned_cols=51 Identities=12% Similarity=0.122 Sum_probs=42.4
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSG 61 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~ 61 (551)
.++....+.+..++ +|+.||.+|||+|+.+.|.+.++.+++. ++.+++..+
T Consensus 10 ~~~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~---~v~~~~~~~ 61 (175)
T 3gyk_A 10 NDPNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP---NVRLVYREW 61 (175)
T ss_dssp CCTTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEEC
T ss_pred cCCCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC---CEEEEEEeC
Confidence 45667778888899 9999999999999999999999988764 466776664
No 454
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.54 E-value=2.6e-07 Score=87.55 Aligned_cols=63 Identities=13% Similarity=0.252 Sum_probs=54.0
Q ss_pred CCc-EEEEEe--cCCCHhhHhhhHHHHHHHHHhcC-CCCEEEEEEeCCC-----CHHHHHHHHhhCCCCccccCChhhHH
Q 008845 19 KGK-IGLYFS--ASWCGPCQRFTPILAEVYNELSR-QGDFEVIFVSGDE-----DDEAFKGYFSKMPWLAVPFSDSETRD 89 (551)
Q Consensus 19 ~gk-vlv~F~--a~wC~~C~~~~p~l~~~~~~~~~-~~~~~vv~v~~d~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (551)
.++ |||.|| ||||+ +.|.|.++++.+.. ..++.|+.|+++. . .
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n------------------------~ 83 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN------------------------K 83 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT------------------------H
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccccc------------------------H
Confidence 356 999999 99999 99999999999964 3468899999886 3 3
Q ss_pred HHHhhcCCC--CCcEEEEEcCCCe
Q 008845 90 KLDELFKVM--GIPHLVILDENGK 111 (551)
Q Consensus 90 ~l~~~~~v~--~~P~~~lid~~G~ 111 (551)
.++..|+|. ++||++++ + |+
T Consensus 84 ~la~~~~V~~~~~PTl~~F-~-G~ 105 (248)
T 2c0g_A 84 ALGDRYKVDDKNFPSIFLF-K-GN 105 (248)
T ss_dssp HHHHHTTCCTTSCCEEEEE-S-SS
T ss_pred HHHHHhCCCcCCCCeEEEE-e-CC
Confidence 599999999 99999999 5 76
No 455
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.53 E-value=6.7e-08 Score=80.51 Aligned_cols=68 Identities=21% Similarity=0.322 Sum_probs=46.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
++++++ ||++||++|+.+.|.|.++.. .+.++.|+.+..... ....+.+.|++.
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~-------~~~~v~v~~~~~~~~------------------~~~~l~~~~~v~ 72 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA-------SYKVVELDELSDGSQ------------------LQSALAHWTGRG 72 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC-------CCEEEEGGGSTTHHH------------------HHHHHHHHHSCC
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC-------CeEEEEccCCCChHH------------------HHHHHHHHhCCC
Confidence 455666 999999999999998876532 244444433332111 123588899999
Q ss_pred CcceEEEECCCCcEEEc
Q 008845 419 GIPMLVAIGPSGRTITK 435 (551)
Q Consensus 419 ~~P~~~lid~~G~i~~~ 435 (551)
++|++ ++ +|+++..
T Consensus 73 ~~Pt~-~~--~g~~v~~ 86 (116)
T 2e7p_A 73 TVPNV-FI--GGKQIGG 86 (116)
T ss_dssp SSCEE-EE--TTEEEEC
T ss_pred CcCEE-EE--CCEEECC
Confidence 99999 45 6888765
No 456
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.52 E-value=1.1e-07 Score=79.25 Aligned_cols=67 Identities=21% Similarity=0.472 Sum_probs=46.1
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 97 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 97 (551)
.++ +++ ||++||++|+.+.|.|.++.. .+.++.|+.+...... ...+.+.|++
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~-------------------~~~l~~~~~v 71 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQL-------------------QSALAHWTGR 71 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHH-------------------HHHHHHHHSC
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHH-------------------HHHHHHHhCC
Confidence 455 666 999999999999999988743 2344444433332111 1358889999
Q ss_pred CCCcEEEEEcCCCeEEE
Q 008845 98 MGIPHLVILDENGKVLS 114 (551)
Q Consensus 98 ~~~P~~~lid~~G~i~~ 114 (551)
.++|++ ++ +|+++.
T Consensus 72 ~~~Pt~-~~--~g~~v~ 85 (116)
T 2e7p_A 72 GTVPNV-FI--GGKQIG 85 (116)
T ss_dssp CSSCEE-EE--TTEEEE
T ss_pred CCcCEE-EE--CCEEEC
Confidence 999999 44 688775
No 457
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.52 E-value=4.9e-07 Score=82.83 Aligned_cols=43 Identities=23% Similarity=0.305 Sum_probs=36.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 383 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d 383 (551)
.++++|+.||.+|||+|..+.|.|.++.++++.+ +.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSD---AYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTT---EEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCc---eEEEEeccc
Confidence 4789999999999999999999999998887643 777777763
No 458
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.51 E-value=5.8e-07 Score=82.17 Aligned_cols=43 Identities=23% Similarity=0.372 Sum_probs=36.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 383 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d 383 (551)
.++++|+.||++|||+|+.+.|.|.++.+++.++ +.+..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPAD---VHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCC---eEEEEEehh
Confidence 4899999999999999999999999988887653 777777664
No 459
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.49 E-value=3.4e-07 Score=86.38 Aligned_cols=65 Identities=15% Similarity=0.218 Sum_probs=54.1
Q ss_pred Cc-EEEEEec--CCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC---CHHHHHHHHhhCCCCccccCChhhHHHHHh
Q 008845 20 GK-IGLYFSA--SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DDEAFKGYFSKMPWLAVPFSDSETRDKLDE 93 (551)
Q Consensus 20 gk-vlv~F~a--~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (551)
++ ++|.||| |||+ +.|.|.++++.+...+++.++.|+++. +.. ..+++
T Consensus 22 ~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~----------------------~~l~~ 75 (240)
T 2qc7_A 22 SKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLN----------------------MELSE 75 (240)
T ss_dssp CSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCS----------------------HHHHH
T ss_pred CCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhh----------------------HHHHH
Confidence 56 9999999 9999 999999999999754468888888663 111 35999
Q ss_pred hcCCC--CCcEEEEEcCCCe
Q 008845 94 LFKVM--GIPHLVILDENGK 111 (551)
Q Consensus 94 ~~~v~--~~P~~~lid~~G~ 111 (551)
.|+|. ++||++++ ++|+
T Consensus 76 ~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 76 KYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HTTCCGGGCSEEEEE-ETTC
T ss_pred HcCCCCCCCCEEEEE-eCCC
Confidence 99999 99999999 6776
No 460
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.47 E-value=8.9e-07 Score=82.58 Aligned_cols=95 Identities=19% Similarity=0.312 Sum_probs=60.9
Q ss_pred eeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC---CH----------------HHHHHH
Q 008845 12 RVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DD----------------EAFKGY 71 (551)
Q Consensus 12 ~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~---~~----------------~~~~~~ 71 (551)
.+.+....|+ +++.||++|||||+++.|.+.++.+. ++.++.+.... .. ..+.++
T Consensus 78 ~~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~ 152 (216)
T 1eej_A 78 MIVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL-----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDV 152 (216)
T ss_dssp SEEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHH
T ss_pred CeeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHH
Confidence 3455666788 99999999999999999999988652 37777765531 11 223344
Q ss_pred HhhCCCCcccc-CChhhHHHHHhhcCCCCCcEEEEEcCCCeEE
Q 008845 72 FSKMPWLAVPF-SDSETRDKLDELFKVMGIPHLVILDENGKVL 113 (551)
Q Consensus 72 ~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~ 113 (551)
+...+...... ..-+....+.+.++|+++|++++ .+|+.+
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~--~dG~~~ 193 (216)
T 1eej_A 153 MAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVL--SNGTLV 193 (216)
T ss_dssp HTTCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEEC--TTSCEE
T ss_pred HhCCCCChhHHHHHHHHHHHHHHHcCCCccCEEEE--cCCeEe
Confidence 44433211011 12233456889999999999854 356443
No 461
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.46 E-value=3.2e-07 Score=74.21 Aligned_cols=63 Identities=16% Similarity=0.314 Sum_probs=47.0
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 418 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 418 (551)
.+++++.|+++||++|+...+.|.++. . ++.+..|++|... ..++++.|+ .
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~----~---~i~~~~vdi~~~~---------------------~~el~~~~g-~ 65 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK----D---RFILQEVDITLPE---------------------NSTWYERYK-F 65 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS----S---SSEEEEEETTSST---------------------THHHHHHSS-S
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh----h---CCeEEEEECCCcc---------------------hHHHHHHHC-C
Confidence 457888999999999999999876542 2 2778888887211 136888999 9
Q ss_pred CcceEEEECCCCcEE
Q 008845 419 GIPMLVAIGPSGRTI 433 (551)
Q Consensus 419 ~~P~~~lid~~G~i~ 433 (551)
++|+++ + +|+.+
T Consensus 66 ~vP~l~-~--~g~~~ 77 (100)
T 1wjk_A 66 DIPVFH-L--NGQFL 77 (100)
T ss_dssp SCSEEE-E--SSSEE
T ss_pred CCCEEE-E--CCEEE
Confidence 999764 4 57764
No 462
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.43 E-value=8.3e-08 Score=92.77 Aligned_cols=62 Identities=18% Similarity=0.420 Sum_probs=43.5
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcc
Q 008845 342 ILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIP 421 (551)
Q Consensus 342 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P 421 (551)
.+++|||+|||+|+++.|.++++.+++ . .|++|.... .+...+++++|+|+++|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l-------~--~Vd~d~~d~-----------------~~~~~~la~~~gI~~vP 253 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV-------P--YVECSPNGP-----------------GTPQAQECTEAGITSYP 253 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS-------C--EEESCSSCS-----------------SSCCCHHHHTTTCCSTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc-------C--EEEEeecCc-----------------hhhHHHHHHHcCCcccC
Confidence 368999999999999999998876443 2 344442100 01124789999999999
Q ss_pred eEEEECCCCcE
Q 008845 422 MLVAIGPSGRT 432 (551)
Q Consensus 422 ~~~lid~~G~i 432 (551)
|+++ +|+.
T Consensus 254 T~~i---~G~~ 261 (291)
T 3kp9_A 254 TWII---NGRT 261 (291)
T ss_dssp EEEE---TTEE
T ss_pred eEEE---CCEE
Confidence 9655 6764
No 463
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.43 E-value=7.7e-07 Score=83.94 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=54.2
Q ss_pred CCEEEEEEec--CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---ChHHHHHHHhcCCCcccccCchhhHHHHH
Q 008845 339 GKTILLYFSA--HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQTSFDEFFKGMPWLALPFGDARKASLSR 413 (551)
Q Consensus 339 gk~vll~F~a--~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~---~~~~~~~~~~~~~~~~~~~~~d~~~~l~~ 413 (551)
+++|||+||| |||+ +.|.|.++++.+++. .++.|+.|++|. +. ...+++
T Consensus 22 ~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~-~~v~~akVDvd~~g~~~---------------------~~~l~~ 75 (240)
T 2qc7_A 22 SKFVLVKFDTQYPYGE----KQDEFKRLAENSASS-DDLLVAEVGISDYGDKL---------------------NMELSE 75 (240)
T ss_dssp CSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC-TTEEEEEECCCCSSSCC---------------------SHHHHH
T ss_pred CCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC-CCeEEEEEeCCcccchh---------------------hHHHHH
Confidence 6899999999 9999 999999999998742 358888888663 11 236999
Q ss_pred hcCCC--CcceEEEECCCCc
Q 008845 414 KFKVS--GIPMLVAIGPSGR 431 (551)
Q Consensus 414 ~~~v~--~~P~~~lid~~G~ 431 (551)
.|+|+ ++||++++ ++|+
T Consensus 76 ~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 76 KYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HTTCCGGGCSEEEEE-ETTC
T ss_pred HcCCCCCCCCEEEEE-eCCC
Confidence 99999 99999999 5676
No 464
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.43 E-value=2.9e-07 Score=71.89 Aligned_cols=66 Identities=21% Similarity=0.390 Sum_probs=49.6
Q ss_pred EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC--CCCC
Q 008845 23 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK--VMGI 100 (551)
Q Consensus 23 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--v~~~ 100 (551)
++.|+++|||+|+...+.|.+++.++. ++.+..++++.+.. ...++.+.++ +.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~~--------------------~~~~l~~~~~~~~~~v 59 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEGI--------------------TKEDLQQKAGKPVETV 59 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHTC--------------------CSHHHHHHTCCCSCCS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccChH--------------------HHHHHHHHhCCCCcee
Confidence 677999999999999999999988765 47777777653210 0025778888 9999
Q ss_pred cEEEEEcCCCeEEE
Q 008845 101 PHLVILDENGKVLS 114 (551)
Q Consensus 101 P~~~lid~~G~i~~ 114 (551)
|+++ + +|+.+.
T Consensus 60 P~i~-~--~g~~i~ 70 (85)
T 1ego_A 60 PQIF-V--DQQHIG 70 (85)
T ss_dssp CEEE-E--TTEEEE
T ss_pred CeEE-E--CCEEEE
Confidence 9984 4 577764
No 465
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.43 E-value=2e-06 Score=78.79 Aligned_cols=42 Identities=24% Similarity=0.290 Sum_probs=37.0
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 62 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d 62 (551)
.++ +|+.||++|||+|+.+.|.+.++.+++.+ ++.+..+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 578 99999999999999999999999998875 4788888775
No 466
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.42 E-value=2.6e-06 Score=80.05 Aligned_cols=167 Identities=12% Similarity=0.121 Sum_probs=104.8
Q ss_pred cEEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcCcCC
Q 008845 180 KTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELST 259 (551)
Q Consensus 180 k~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~v~~ 259 (551)
+.+++-|+.+| |....+.+.+++..+. . +.|.... .+.++..|+++.
T Consensus 28 ~v~vVgff~~~---~~~~~~~f~~~A~~l~-~-----~~F~~t~------------------------~~~v~~~~~v~~ 74 (227)
T 4f9z_D 28 EVAVIGFFQDL---EIPAVPILHSMVQKFP-G-----VSFGIST------------------------DSEVLTHYNITG 74 (227)
T ss_dssp SEEEEEECSCS---CSTHHHHHHHHTTTCT-T-----SEEEEEC------------------------CHHHHHHTTCCS
T ss_pred CeEEEEEecCC---CchhHHHHHHHHHhCC-C-----ceEEEEC------------------------CHHHHHHcCCCC
Confidence 55666677776 5678888888888773 2 3343321 235677899988
Q ss_pred cceEEEECCCC-Cc-ccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCeee--cc
Q 008845 260 LPTLVIIGPDG-KT-LHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKVP--VS 335 (551)
Q Consensus 260 ~P~lvi~~~~g-k~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v~--l~ 335 (551)
|+++++.... +. .+.... .| +++.+.+..++..... |-+. ..+..... ..
T Consensus 75 -p~i~lfk~~~~~~~~~~~~~-----~g----~~~~~~l~~fi~~~~~---------------plv~-e~t~~n~~~~~~ 128 (227)
T 4f9z_D 75 -NTICLFRLVDNEQLNLEDED-----IE----SIDATKLSRFIEINSL---------------HMVT-EYNPVTVIGLFN 128 (227)
T ss_dssp -SEEEEEETTTTEEEEECHHH-----HH----TCCHHHHHHHHHHHCC---------------CSEE-ECCHHHHHHHHH
T ss_pred -CeEEEEEecCcccccccccc-----cC----CCCHHHHHHHHHHhCC---------------Ccee-ecCcccHHHHhc
Confidence 9999986422 21 111000 00 3467777777763321 1111 11111110 11
Q ss_pred cCCC-CEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHh
Q 008845 336 DLAG-KTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 414 (551)
Q Consensus 336 ~~~g-k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 414 (551)
.+ +.++|.|..+||+.|....+.+.+++++++++ +.+++++.+... .+.+.+.
T Consensus 129 --~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~---i~F~~vd~~~~~---------------------~~~~l~~ 182 (227)
T 4f9z_D 129 --SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK---ILFILVDSGMKE---------------------NGKVISF 182 (227)
T ss_dssp --SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT---CEEEEEETTSGG---------------------GHHHHHH
T ss_pred --cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC---EEEEEeCCccHh---------------------HHHHHHH
Confidence 13 45666777899999999999999999999876 788888776422 1246788
Q ss_pred cCCC--CcceEEEECCCCc
Q 008845 415 FKVS--GIPMLVAIGPSGR 431 (551)
Q Consensus 415 ~~v~--~~P~~~lid~~G~ 431 (551)
||+. .+|++++++..+.
T Consensus 183 fgl~~~~~P~~~i~~~~~~ 201 (227)
T 4f9z_D 183 FKLKESQLPALAIYQTLDD 201 (227)
T ss_dssp TTCCGGGCSEEEEEESSSC
T ss_pred cCCCcccCCEEEEEECCCC
Confidence 9998 8999999986554
No 467
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.37 E-value=2.8e-06 Score=80.56 Aligned_cols=93 Identities=10% Similarity=0.157 Sum_probs=59.0
Q ss_pred ccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC---CC-------------hHH-HHHHHhcCC
Q 008845 335 SDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD---RD-------------QTS-FDEFFKGMP 397 (551)
Q Consensus 335 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d---~~-------------~~~-~~~~~~~~~ 397 (551)
..-.++.+|+.|+.+|||+|+++.+.+.++.+. + ++.|+.+.+. .. +.. +..+...+.
T Consensus 93 G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g---~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 93 GKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS--G---KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T---SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC--C---cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 333478999999999999999999998876553 2 4777776652 11 111 111111110
Q ss_pred --Ccc--------cccCchhhHHHHHhcCCCCcceEEEECCCCcE
Q 008845 398 --WLA--------LPFGDARKASLSRKFKVSGIPMLVAIGPSGRT 432 (551)
Q Consensus 398 --~~~--------~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 432 (551)
.+. .....+.+..+++.+||+++|++++.+.+|++
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 000 00012344568899999999999999888975
No 468
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.36 E-value=4.5e-07 Score=70.71 Aligned_cols=66 Identities=15% Similarity=0.270 Sum_probs=49.7
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcC--CCCc
Q 008845 343 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK--VSGI 420 (551)
Q Consensus 343 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~--v~~~ 420 (551)
++.|+++|||+|++..+.|.++..+++ ++.+..++++.++. ...++.+.++ +.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~----~i~~~~vdi~~~~~-------------------~~~~l~~~~~~~~~~v 59 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD----DFQYQYVDIRAEGI-------------------TKEDLQQKAGKPVETV 59 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS----SCEEEEECHHHHTC-------------------CSHHHHHHTCCCSCCS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC----CceEEEEecccChH-------------------HHHHHHHHhCCCCcee
Confidence 677999999999999999999877653 37888887753321 0135788888 9999
Q ss_pred ceEEEECCCCcEEE
Q 008845 421 PMLVAIGPSGRTIT 434 (551)
Q Consensus 421 P~~~lid~~G~i~~ 434 (551)
|+++ + +|+.+.
T Consensus 60 P~i~-~--~g~~i~ 70 (85)
T 1ego_A 60 PQIF-V--DQQHIG 70 (85)
T ss_dssp CEEE-E--TTEEEE
T ss_pred CeEE-E--CCEEEE
Confidence 9984 4 577765
No 469
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.33 E-value=1.6e-07 Score=90.81 Aligned_cols=72 Identities=18% Similarity=0.410 Sum_probs=49.5
Q ss_pred eeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHH
Q 008845 12 RVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDK 90 (551)
Q Consensus 12 ~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (551)
.+++++.-++ .+++|||||||||+++.|.+++++++++ .++++.... .+...+
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l~--------~Vd~d~~d~------------------~~~~~~ 242 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGP------------------GTPQAQ 242 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCSSCS------------------SSCCCH
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHcC--------EEEEeecCc------------------hhhHHH
Confidence 3445554455 7899999999999999999999886552 344441100 000146
Q ss_pred HHhhcCCCCCcEEEEEcCCCeE
Q 008845 91 LDELFKVMGIPHLVILDENGKV 112 (551)
Q Consensus 91 l~~~~~v~~~P~~~lid~~G~i 112 (551)
++++|+|+++||+++ +|+.
T Consensus 243 la~~~gI~~vPT~~i---~G~~ 261 (291)
T 3kp9_A 243 ECTEAGITSYPTWII---NGRT 261 (291)
T ss_dssp HHHTTTCCSTTEEEE---TTEE
T ss_pred HHHHcCCcccCeEEE---CCEE
Confidence 899999999999555 6764
No 470
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.29 E-value=5.3e-06 Score=75.64 Aligned_cols=42 Identities=21% Similarity=0.331 Sum_probs=35.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS 382 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~ 382 (551)
.++++|+.||.+|||+|..+.+.+.++.+++..+ +.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKD---VRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT---EEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCc---eEEEEeCc
Confidence 4788999999999999999999999888877543 77777776
No 471
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.29 E-value=1e-06 Score=71.20 Aligned_cols=60 Identities=23% Similarity=0.347 Sum_probs=44.9
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
+++.|+++||++|+.+.|.|.++.+ ++.+..|+++.... .++.+.|+ .++|
T Consensus 18 ~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~~~~~----------------------~el~~~~g-~~vP 68 (100)
T 1wjk_A 18 VLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDITLPEN----------------------STWYERYK-FDIP 68 (100)
T ss_dssp EEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETTSSTT----------------------HHHHHHSS-SSCS
T ss_pred EEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECCCcch----------------------HHHHHHHC-CCCC
Confidence 8888999999999999998876542 26788888872111 35888999 9999
Q ss_pred EEEEEcCCCeEE
Q 008845 102 HLVILDENGKVL 113 (551)
Q Consensus 102 ~~~lid~~G~i~ 113 (551)
+++ + +|+.+
T Consensus 69 ~l~-~--~g~~~ 77 (100)
T 1wjk_A 69 VFH-L--NGQFL 77 (100)
T ss_dssp EEE-E--SSSEE
T ss_pred EEE-E--CCEEE
Confidence 763 4 56553
No 472
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.26 E-value=2.8e-05 Score=74.17 Aligned_cols=205 Identities=12% Similarity=0.159 Sum_probs=116.0
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
++|-|+++|| ....+.+.++++.+++. +.+..+ . + ..+.+.|++.+ |
T Consensus 27 ~vvgff~~~~---~~~~~~f~~~A~~lr~~--~~F~~~-~--~------------------------~~v~~~~~~~~-p 73 (252)
T 2h8l_A 27 SIVGFFDDSF---SEAHSEFLKAASNLRDN--YRFAHT-N--V------------------------ESLVNEYDDNG-E 73 (252)
T ss_dssp EEEEEESCTT---SHHHHHHHHHHHHTTTT--SCEEEE-C--C------------------------HHHHHHHCSSS-E
T ss_pred EEEEEECCCC---ChHHHHHHHHHHhcccC--cEEEEE-C--h------------------------HHHHHHhCCCC-C
Confidence 7888999985 55678899999999753 444333 1 2 24788899997 9
Q ss_pred EEEEEcCCCeEEEc-Ccchhhhhc-CCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCceeeccccCC
Q 008845 102 HLVILDENGKVLSD-GGVEIIREY-GVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSDLEG 179 (551)
Q Consensus 102 ~~~lid~~G~i~~~-~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g 179 (551)
+++++.+ ++.... ..... .+ .. .++.+.|..++... ..+.+...+.+..... .+
T Consensus 74 ~i~~fk~-~~~~~kf~e~~~--~y~~g---~~~~~~l~~fi~~~----------------~~Plv~e~t~~n~~~~--~~ 129 (252)
T 2h8l_A 74 GIILFRP-SHLTNKFEDKTV--AYTEQ---KMTSGKIKKFIQEN----------------IFGICPHMTEDNKDLI--QG 129 (252)
T ss_dssp EEEEECC-GGGCCTTSCSEE--ECCCS---SCCHHHHHHHHHHH----------------SSCSSCEECTTTHHHH--SS
T ss_pred cEEEEcc-hhhccccccccc--ccCCC---CcCHHHHHHHHHhc----------------ccCCeeecccccHhhh--cC
Confidence 9998843 211110 00000 11 11 13556666665432 2233322222222221 22
Q ss_pred cEEEEEEecCCCcc----chhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhc
Q 008845 180 KTIGLYFSMSSYKA----SAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYF 255 (551)
Q Consensus 180 k~v~l~f~~~~~~~----c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f 255 (551)
..+++.|+...... ...+...+.++++++++++.. +.|+.+|.+. ..+++++|
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~--~~F~~~d~~~---------------------~~~~~~~f 186 (252)
T 2h8l_A 130 KDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHK--LNFAVASRKT---------------------FSHELSDF 186 (252)
T ss_dssp SSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEETTT---------------------THHHHGGG
T ss_pred CCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCce--EEEEEEchHH---------------------HHHHHHHc
Confidence 23344444332221 124777888899999976544 4455555443 45678999
Q ss_pred Cc--C--CcceEEEECCCCC-cccccchhhhhhcCCCCCCCChhh--HHHHHHHHHHHHhhhhhhhhhccC
Q 008845 256 EL--S--TLPTLVIIGPDGK-TLHSNVAEAIEEHGVGAFPFTPEK--FAELAEIQRAKEESQTLESVLVSG 319 (551)
Q Consensus 256 ~v--~--~~P~lvi~~~~gk-~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~ 319 (551)
|+ . .+|.+++++.+++ +... + .++.+. +.+|+....++...+.++|+.++.
T Consensus 187 gl~~~~~~~P~v~i~~~~~~ky~~~-----------~--~~t~~~~~i~~F~~~~~~Gkl~~~~kSe~iPe 244 (252)
T 2h8l_A 187 GLESTAGEIPVVAIRTAKGEKFVMQ-----------E--EFSRDGKALERFLQDYFDGNLKRYLKSEPIPE 244 (252)
T ss_dssp TCCCCSCSSCEEEEECTTSCEEECC-----------S--CCCTTSHHHHHHHHHHHHTCSCCCC-------
T ss_pred CCCCccCCCCEEEEEeCcCcEecCC-----------c--ccCcchHHHHHHHHHHHCCCccccccCCCCCC
Confidence 99 3 6899999976443 2111 0 456777 999999999999988888877654
No 473
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.26 E-value=2.7e-06 Score=78.98 Aligned_cols=86 Identities=21% Similarity=0.296 Sum_probs=54.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---Ch----------------HHHHHHHhcCCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQ----------------TSFDEFFKGMPW 398 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~---~~----------------~~~~~~~~~~~~ 398 (551)
.++++++.||++|||+|+++.|.|.++.+ . ++.+.++.... .+ ..+.+++...+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----L--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----T--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----C--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 37899999999999999999999888533 1 36776654431 11 112222222110
Q ss_pred c--ccccCchhhHHHHHhcCCCCcceEEEECCCCc
Q 008845 399 L--ALPFGDARKASLSRKFKVSGIPMLVAIGPSGR 431 (551)
Q Consensus 399 ~--~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~ 431 (551)
. ......+.+..+++.+||+++|++++ .+|+
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 0 01112235567899999999999988 4676
No 474
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.25 E-value=5.7e-06 Score=78.44 Aligned_cols=100 Identities=10% Similarity=0.094 Sum_probs=62.9
Q ss_pred cCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC---CH-------------HH-HHH
Q 008845 9 LLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DD-------------EA-FKG 70 (551)
Q Consensus 9 ~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~---~~-------------~~-~~~ 70 (551)
....+.+..-.++ +|+.|+.+|||+|+++.|.+.++.+. +++.++.+.+.- .. .. +..
T Consensus 86 ~~~~i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~----g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~ 161 (241)
T 1v58_A 86 QSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS----GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQ 161 (241)
T ss_dssp TSCCEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT----TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHH
T ss_pred CCCCceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC----CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHH
Confidence 4455666666788 89999999999999999999887664 357777776531 11 11 111
Q ss_pred HHhhCC---CCccccC------ChhhHHHHHhhcCCCCCcEEEEEcCCCeE
Q 008845 71 YFSKMP---WLAVPFS------DSETRDKLDELFKVMGIPHLVILDENGKV 112 (551)
Q Consensus 71 ~~~~~~---~~~~~~~------~~~~~~~l~~~~~v~~~P~~~lid~~G~i 112 (551)
+...+. ....... .-+....+.+.++|+++|++++.+.+|++
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 162 YEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp HHHTTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred HHHHhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 111111 0000000 01122457789999999999999878865
No 475
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.24 E-value=2.1e-06 Score=91.21 Aligned_cols=68 Identities=18% Similarity=0.225 Sum_probs=57.6
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 96 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (551)
..++ .++.||++||++|+.+.|.+++++..+. ++.+..|+++...+ +.+.|+
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~---~v~~~~vd~~~~~~------------------------~~~~~~ 167 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP---RIKHTAIDGGTFQN------------------------EITERN 167 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT---TEEEEEEETTTCHH------------------------HHHHTT
T ss_pred cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC---ceEEEEEechhhHH------------------------HHHHhC
Confidence 3466 8899999999999999999999988865 58888888886644 889999
Q ss_pred CCCCcEEEEEcCCCeEEEc
Q 008845 97 VMGIPHLVILDENGKVLSD 115 (551)
Q Consensus 97 v~~~P~~~lid~~G~i~~~ 115 (551)
|.++|++++ +|+.+..
T Consensus 168 i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 168 VMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp CCSSSEEEE---TTEEEEE
T ss_pred CCccCEEEE---CCEEEec
Confidence 999999977 7888753
No 476
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.24 E-value=2.8e-05 Score=74.04 Aligned_cols=201 Identities=13% Similarity=0.101 Sum_probs=117.5
Q ss_pred Cc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCC
Q 008845 20 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM 98 (551)
Q Consensus 20 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 98 (551)
.+ ++|-|++++| ....+.+.++++.+++. +.+..+ . + ..+.+.|++.
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~--~~F~~t-~--~------------------------~~v~~~~~v~ 72 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLRED--YKFHHT-F--S------------------------TEIAKFLKVS 72 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTT--CCEEEE-C--C------------------------HHHHHHHTCC
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcC--cEEEEE-C--c------------------------HHHHHHcCCC
Confidence 35 7888999875 56788999999999753 444332 1 2 2477789998
Q ss_pred CCcEEEEEcC--------CCeEEEcCcchhhhhcCCCCCCchHHHHHHHHHHHHHHHhhcccccccccCCcceeecCCCc
Q 008845 99 GIPHLVILDE--------NGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGR 170 (551)
Q Consensus 99 ~~P~~~lid~--------~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 170 (551)
+ |+++++.+ ++.+... |. .+++.+.|..++.. ...+.+...+.+
T Consensus 73 ~-p~ivlfk~~~~~~kfde~~~~y~---------g~--~~~~~~~l~~fi~~----------------~~~Plv~e~t~~ 124 (250)
T 3ec3_A 73 L-GKLVLMQPEKFQSKYEPRMHVMD---------VQ--GSTEASAIKDYVVK----------------HALPLVGHRKTS 124 (250)
T ss_dssp S-SEEEEECCGGGCCTTSCSCEEEE---------CC--TTSCHHHHHHHHHH----------------HSSCTEEEECTT
T ss_pred C-CeEEEEecchhhccccccceecc---------CC--CCCCHHHHHHHHHH----------------cCCCceeecCcc
Confidence 7 99999954 2222221 10 12345556555533 233444333333
Q ss_pred eeeccccCCcEEEEEEecCC-C---c-cchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCc
Q 008845 171 KISVSDLEGKTIGLYFSMSS-Y---K-ASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKD 245 (551)
Q Consensus 171 ~~~~~~~~gk~v~l~f~~~~-~---~-~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d 245 (551)
.....- .++.+.+.|+... . + ....+...+.+++++++ + +.|+.+|.+.
T Consensus 125 n~~~~~-~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-k-----i~F~~~d~~~------------------- 178 (250)
T 3ec3_A 125 NDAKRY-SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-E-----YTFAIADEED------------------- 178 (250)
T ss_dssp THHHHS-CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-T-----SEEEEEETTT-------------------
T ss_pred chhhhh-ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-c-----eeEEEEcHHH-------------------
Confidence 222111 3455555555432 2 2 22446677777777776 4 6666666543
Q ss_pred hhHHHHHhhcCcCC--c-ceEEEECCCC-CcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCC
Q 008845 246 KSREKLARYFELST--L-PTLVIIGPDG-KTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGD 320 (551)
Q Consensus 246 ~~~~~l~~~f~v~~--~-P~lvi~~~~g-k~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 320 (551)
+.+.+++||+.. . |.+++++.++ ++.... -.++.+.+.+|+....+++..+.++|+.++..
T Consensus 179 --~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~------------~~~t~~~i~~Fv~~~~~Gkl~p~~kSepiPe~ 243 (250)
T 3ec3_A 179 --YATEVKDLGLSESGGDVNAAILDESGKKFAMEP------------EEFDSDALREFVMAFKKGKLKPVIKSQPVPKN 243 (250)
T ss_dssp --THHHHHHTTCSSCSCSCEEEEECTTSCEEECCC------------CSCCHHHHHHHHHHHHTTCCCCCC--------
T ss_pred --HHHHHHHcCCCccCCCcEEEEEcCCCceecCCc------------ccCCHHHHHHHHHHHHCCCccceeecCCCCCC
Confidence 456678999973 4 5778887554 332211 14689999999999999999999999887654
No 477
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.19 E-value=8.8e-06 Score=74.18 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=35.6
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 62 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d 62 (551)
.++ +|+.||.+|||+|+.+.|.+.++.+++.. ++.+..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEehh
Confidence 578 99999999999999999999999998875 4777666653
No 478
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.19 E-value=8.3e-06 Score=74.48 Aligned_cols=43 Identities=28% Similarity=0.407 Sum_probs=37.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 383 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d 383 (551)
.++++|+.||+.|||+|+.+.|.+.++.+++.++ +.+..+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~---v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD---MYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTT---EEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCC---eEEEEecCC
Confidence 3799999999999999999999999888877653 777777775
No 479
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.14 E-value=1.8e-05 Score=70.82 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=40.5
Q ss_pred eecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008845 332 VPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 383 (551)
Q Consensus 332 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d 383 (551)
+.+.+..++++|+.|+..|||+|..+.+.+.++.+++.+. .++++++..+.
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~-~~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKS-GKVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHT-TSEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhC-CcEEEEEEeCC
Confidence 4445556899999999999999999999999988888322 24888887764
No 480
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.07 E-value=1.8e-05 Score=73.26 Aligned_cols=87 Identities=18% Similarity=0.164 Sum_probs=53.6
Q ss_pred CCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC---CH----------------HHHHHHHhhCCC
Q 008845 18 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DD----------------EAFKGYFSKMPW 77 (551)
Q Consensus 18 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~---~~----------------~~~~~~~~~~~~ 77 (551)
-.++ +++.||.+|||||+++.|.+.++.+. ++.+.++.... .. ..+..++...+.
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~-----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 84 KNEKHVVTVFMDITCHYCHLLHQQLKEYNDL-----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 3577 99999999999999999999986542 36666654431 11 122222222221
Q ss_pred Ccccc-CChhhHHHHHhhcCCCCCcEEEEEcCCCe
Q 008845 78 LAVPF-SDSETRDKLDELFKVMGIPHLVILDENGK 111 (551)
Q Consensus 78 ~~~~~-~~~~~~~~l~~~~~v~~~P~~~lid~~G~ 111 (551)
..... ..-+....+.+.++|+++|++++ .+|+
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 10000 11122356889999999999887 4675
No 481
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.04 E-value=5.1e-05 Score=67.85 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=44.8
Q ss_pred ccCceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC
Q 008845 8 ELLLRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 62 (551)
Q Consensus 8 ~~~~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d 62 (551)
.....+.+.+..++ +|+.|+..|||+|+.+.|.+.++.+++.+.+++.+++..+.
T Consensus 15 ~~~~~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 15 NTETGLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp CSSSSEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCCCCcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 44556777777888 89999999999999999999999988844446888887664
No 482
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.97 E-value=2.6e-05 Score=58.78 Aligned_cols=59 Identities=15% Similarity=0.231 Sum_probs=41.3
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcce
Q 008845 343 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 422 (551)
Q Consensus 343 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~ 422 (551)
++.|+++||++|++..+.|.++ ++.+..++++.+++. ...+ +.+++.++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~---------~i~~~~~di~~~~~~-------------------~~~~-~~~~~~~vP~ 53 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA---------GLAYNTVDISLDDEA-------------------RDYV-MALGYVQAPV 53 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHH-------------------HHHH-HHTTCBCCCE
T ss_pred EEEEeCCCChHHHHHHHHHHHc---------CCCcEEEECCCCHHH-------------------HHHH-HHcCCCccCE
Confidence 5679999999999999887653 256667778765421 0122 4689999999
Q ss_pred EEEECCCCcEE
Q 008845 423 LVAIGPSGRTI 433 (551)
Q Consensus 423 ~~lid~~G~i~ 433 (551)
+++ +|+.+
T Consensus 54 l~~---~g~~~ 61 (75)
T 1r7h_A 54 VEV---DGEHW 61 (75)
T ss_dssp EEE---TTEEE
T ss_pred EEE---CCeEE
Confidence 873 56653
No 483
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.97 E-value=2.3e-05 Score=71.52 Aligned_cols=42 Identities=26% Similarity=0.357 Sum_probs=35.6
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 62 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d 62 (551)
.++ +|++||.+|||+|+.+.|.+.++.+++.. ++.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEeccc
Confidence 577 89999999999999999999999988864 4777777653
No 484
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.96 E-value=3.3e-05 Score=59.32 Aligned_cols=59 Identities=12% Similarity=0.158 Sum_probs=41.7
Q ss_pred EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCcE
Q 008845 23 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 102 (551)
Q Consensus 23 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 102 (551)
++.|+++|||+|+...+.|.+. ++.+..++++.+.+. ......+++.++|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~~~---------------------~~~~~~~g~~~vP~ 53 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVPEA---------------------AEALRAQGFRQLPV 53 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHH---------------------HHHHHHTTCCSSCE
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCHHH---------------------HHHHHHhCCCccCE
Confidence 5679999999999999888752 255677888866441 11223589999999
Q ss_pred EEEEcCCCeEE
Q 008845 103 LVILDENGKVL 113 (551)
Q Consensus 103 ~~lid~~G~i~ 113 (551)
++ + +|+.+
T Consensus 54 ~~-~--~g~~~ 61 (81)
T 1h75_A 54 VI-A--GDLSW 61 (81)
T ss_dssp EE-E--TTEEE
T ss_pred EE-E--CCEEE
Confidence 84 4 46554
No 485
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.95 E-value=2.5e-05 Score=60.03 Aligned_cols=59 Identities=15% Similarity=0.295 Sum_probs=41.2
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcce
Q 008845 343 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 422 (551)
Q Consensus 343 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~ 422 (551)
++.|+++|||+|++..+.|.++ ++.+..++++.+++. .+..+.+++.++|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~---------~i~~~~vdi~~~~~~--------------------~~~~~~~g~~~vP~ 53 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR---------GFDFEMINVDRVPEA--------------------AEALRAQGFRQLPV 53 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHH--------------------HHHHHHTTCCSSCE
T ss_pred EEEEcCCCChhHHHHHHHHHHC---------CCCeEEEECCCCHHH--------------------HHHHHHhCCCccCE
Confidence 5679999999999998887642 256677888866421 11223589999999
Q ss_pred EEEECCCCcEE
Q 008845 423 LVAIGPSGRTI 433 (551)
Q Consensus 423 ~~lid~~G~i~ 433 (551)
++ + +|+.+
T Consensus 54 ~~-~--~g~~~ 61 (81)
T 1h75_A 54 VI-A--GDLSW 61 (81)
T ss_dssp EE-E--TTEEE
T ss_pred EE-E--CCEEE
Confidence 84 4 46543
No 486
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.90 E-value=5.3e-05 Score=57.04 Aligned_cols=59 Identities=20% Similarity=0.265 Sum_probs=41.6
Q ss_pred EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCcE
Q 008845 23 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 102 (551)
Q Consensus 23 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 102 (551)
++.|+++||++|+...+.|.++ ++.+..++++.+.+. ...+ +.+++.++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~~~--------------------~~~~-~~~~~~~vP~ 53 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDDEA--------------------RDYV-MALGYVQAPV 53 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHH--------------------HHHH-HHTTCBCCCE
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCHHH--------------------HHHH-HHcCCCccCE
Confidence 5679999999999999888754 255667788765431 0122 4689999999
Q ss_pred EEEEcCCCeEE
Q 008845 103 LVILDENGKVL 113 (551)
Q Consensus 103 ~~lid~~G~i~ 113 (551)
+++ +|+.+
T Consensus 54 l~~---~g~~~ 61 (75)
T 1r7h_A 54 VEV---DGEHW 61 (75)
T ss_dssp EEE---TTEEE
T ss_pred EEE---CCeEE
Confidence 873 56554
No 487
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.86 E-value=0.00012 Score=66.66 Aligned_cols=42 Identities=21% Similarity=0.333 Sum_probs=35.9
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 62 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d 62 (551)
.++ +||.||.+|||||+.+.|.+.++.+++.+ ++.+..+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCC
Confidence 478 99999999999999999999999988875 4777777665
No 488
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.85 E-value=2.4e-05 Score=63.53 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=44.6
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCH--HHHHHHHhhCCCCccccCChhhHHHHHhhcCCCC
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDD--EAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMG 99 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 99 (551)
.++.|+++|||+|+...+.|.++...+. + +..++++.+. .. ....+.+.+++.+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~--~~~vdi~~~~~~~~-------------------~~~~l~~~~g~~~ 68 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---L--LEFVDITATSDTNE-------------------IQDYLQQLTGART 68 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---S--EEEEEGGGSTTHHH-------------------HHHHHHHHHSCCC
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---c--cEEEEccCCCCHHH-------------------HHHHHHHHhCCCC
Confidence 5666999999999999998886543321 2 4455666442 11 1134778899999
Q ss_pred CcEEEEEcCCCeEEE
Q 008845 100 IPHLVILDENGKVLS 114 (551)
Q Consensus 100 ~P~~~lid~~G~i~~ 114 (551)
+|+++ + +|+.+.
T Consensus 69 vP~i~-~--~g~~i~ 80 (105)
T 1kte_A 69 VPRVF-I--GKECIG 80 (105)
T ss_dssp SCEEE-E--TTEEEE
T ss_pred cCeEE-E--CCEEEe
Confidence 99974 3 577764
No 489
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.80 E-value=2.2e-05 Score=64.94 Aligned_cols=68 Identities=18% Similarity=0.202 Sum_probs=44.5
Q ss_pred EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCCc
Q 008845 22 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 101 (551)
Q Consensus 22 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 101 (551)
.++.|+++|||+|+...+.|.++.-.. ++ +..++++.+.+. ......+.+.+++.++|
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~--~~~vdi~~~~~~-----------------~~~~~~l~~~~g~~~vP 77 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR---GA--YEIVDIKEFKPE-----------------NELRDYFEQITGGKTVP 77 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT---TS--EEEEEGGGSSSH-----------------HHHHHHHHHHHSCCSSC
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc---Cc--eEEEEccCCCCh-----------------HHHHHHHHHHhCCCCcC
Confidence 677799999999999888876532110 11 566677654210 00113578889999999
Q ss_pred EEEEEcCCCeEEE
Q 008845 102 HLVILDENGKVLS 114 (551)
Q Consensus 102 ~~~lid~~G~i~~ 114 (551)
++++ +|+.+.
T Consensus 78 ~v~i---~g~~ig 87 (114)
T 2hze_A 78 RIFF---GKTSIG 87 (114)
T ss_dssp EEEE---TTEEEE
T ss_pred EEEE---CCEEEe
Confidence 8754 577764
No 490
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.80 E-value=0.00029 Score=63.85 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=35.0
Q ss_pred CCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeC
Q 008845 19 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSG 61 (551)
Q Consensus 19 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~ 61 (551)
.++ +|+.||.+|||+|..+.|.+.++.+++.. ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK--DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC--ceEEEEeCc
Confidence 678 89999999999999999999999988763 577776765
No 491
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.76 E-value=0.00015 Score=62.80 Aligned_cols=86 Identities=24% Similarity=0.375 Sum_probs=54.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-----CCh--------------HHHHHHHhcCCC
Q 008845 338 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-----RDQ--------------TSFDEFFKGMPW 398 (551)
Q Consensus 338 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d-----~~~--------------~~~~~~~~~~~~ 398 (551)
.++.+|+.|+.++||+|+++.+.|.++ .++.|+++..- .+. ..|..++..-..
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l--------~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM--------TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC--------CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc--------CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 378999999999999999999987653 23677765432 111 112222221110
Q ss_pred c----ccccCchhhHHHHHhcCCCCcceEEEECCCCcEE
Q 008845 399 L----ALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTI 433 (551)
Q Consensus 399 ~----~~~~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~ 433 (551)
. ......+.+..+++.+||+++||+++ .+|+++
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~i 121 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRTQ 121 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCEE
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEEe
Confidence 0 01112345678899999999999998 577753
No 492
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.69 E-value=0.00019 Score=62.02 Aligned_cols=94 Identities=23% Similarity=0.263 Sum_probs=58.7
Q ss_pred ceeecccCCCc-EEEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCC-----CH--------------HHHHH
Q 008845 11 LRVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-----DD--------------EAFKG 70 (551)
Q Consensus 11 ~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~-----~~--------------~~~~~ 70 (551)
..+.+..-.++ +|+.|.-++||+|+++.+.+.++ +++.++++...- +. ..|..
T Consensus 5 ~ai~~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-------~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~ 77 (147)
T 3gv1_A 5 KAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKM-------TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTD 77 (147)
T ss_dssp GSEEEEETTCCEEEEEEECTTCHHHHHHHHHHTTC-------CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHH
T ss_pred HCeeeecCCCCEEEEEEECCCChhHHHHHHHHhhc-------CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHH
Confidence 44555555678 99999999999999999988653 357777664321 11 12333
Q ss_pred HHhhCCCCc--cc-cCChhhHHHHHhhcCCCCCcEEEEEcCCCeEE
Q 008845 71 YFSKMPWLA--VP-FSDSETRDKLDELFKVMGIPHLVILDENGKVL 113 (551)
Q Consensus 71 ~~~~~~~~~--~~-~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~ 113 (551)
++....... .. -..-+....+.+.++|+++|++++ .+|+++
T Consensus 78 ~~~~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~i 121 (147)
T 3gv1_A 78 WMRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRTQ 121 (147)
T ss_dssp HHHHCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCEE
T ss_pred HHhCCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEEe
Confidence 333222110 01 112223457889999999999988 567654
No 493
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=9.9e-05 Score=62.53 Aligned_cols=62 Identities=18% Similarity=0.305 Sum_probs=42.9
Q ss_pred EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCCH--HHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCC
Q 008845 23 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDD--EAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGI 100 (551)
Q Consensus 23 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 100 (551)
++.|+++|||+|+...+.|.++. +.+..++++.+. .. ....+.+.+++.++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~--------i~~~~vdid~~~~~~~-------------------~~~~l~~~~g~~~v 81 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQ-------------------FQDALYKMTGERTV 81 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHT--------CCCEEEETTTSTTHHH-------------------HHHHHHHHHSSCCS
T ss_pred EEEEEcCCChHHHHHHHHHHHcC--------CCcEEEECcCCcCcHH-------------------HHHHHHHHhCCCCc
Confidence 34499999999999999888752 334556666541 11 11347788999999
Q ss_pred cEEEEEcCCCeEEE
Q 008845 101 PHLVILDENGKVLS 114 (551)
Q Consensus 101 P~~~lid~~G~i~~ 114 (551)
|+++ + +|+.+.
T Consensus 82 P~l~-i--~G~~ig 92 (130)
T 2cq9_A 82 PRIF-V--NGTFIG 92 (130)
T ss_dssp SEEE-E--TTEEEE
T ss_pred CEEE-E--CCEEEc
Confidence 9985 3 677664
No 494
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.69 E-value=3e-05 Score=64.10 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=44.5
Q ss_pred EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeE---EEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008845 341 TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLE---VVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 417 (551)
Q Consensus 341 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~---vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 417 (551)
..++.|+++|||+|++..+.|.++ ++. +..+++|.+++. ......+.+.+|+
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~---------~~~~~~~~~vdi~~~~~~----------------~~~~~~l~~~~g~ 73 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKF---------SFKRGAYEIVDIKEFKPE----------------NELRDYFEQITGG 73 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTS---------CBCTTSEEEEEGGGSSSH----------------HHHHHHHHHHHSC
T ss_pred CCEEEEEeCCChhHHHHHHHHHHc---------CCCcCceEEEEccCCCCh----------------HHHHHHHHHHhCC
Confidence 346779999999999998877542 133 566777654310 0112367888999
Q ss_pred CCcceEEEECCCCcEEE
Q 008845 418 SGIPMLVAIGPSGRTIT 434 (551)
Q Consensus 418 ~~~P~~~lid~~G~i~~ 434 (551)
.++|++++ +|+.+.
T Consensus 74 ~~vP~v~i---~g~~ig 87 (114)
T 2hze_A 74 KTVPRIFF---GKTSIG 87 (114)
T ss_dssp CSSCEEEE---TTEEEE
T ss_pred CCcCEEEE---CCEEEe
Confidence 99998754 587765
No 495
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.68 E-value=3.9e-05 Score=62.21 Aligned_cols=68 Identities=18% Similarity=0.219 Sum_probs=43.4
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcce
Q 008845 343 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 422 (551)
Q Consensus 343 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~ 422 (551)
++.|+++|||+|++..+.|.++...+ .+ +..+++|.+.+. ......+.+.+++.++|+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~----~~--~~~vdi~~~~~~----------------~~~~~~l~~~~g~~~vP~ 71 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE----GL--LEFVDITATSDT----------------NEIQDYLQQLTGARTVPR 71 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT----TS--EEEEEGGGSTTH----------------HHHHHHHHHHHSCCCSCE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC----Cc--cEEEEccCCCCH----------------HHHHHHHHHHhCCCCcCe
Confidence 56699999999999999876542221 12 445566544200 001135778899999999
Q ss_pred EEEECCCCcEEEc
Q 008845 423 LVAIGPSGRTITK 435 (551)
Q Consensus 423 ~~lid~~G~i~~~ 435 (551)
++ + +|+.+..
T Consensus 72 i~-~--~g~~i~g 81 (105)
T 1kte_A 72 VF-I--GKECIGG 81 (105)
T ss_dssp EE-E--TTEEEES
T ss_pred EE-E--CCEEEec
Confidence 75 4 5777653
No 496
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.65 E-value=6.9e-05 Score=64.96 Aligned_cols=104 Identities=20% Similarity=0.227 Sum_probs=75.0
Q ss_pred EEEEEEecCCCccchhhhHHHHHHHHHHhcCCCceEEEEeecccCHHHHHHHhcCCCCccccCCchhHHHHHhhcCcCC-
Q 008845 181 TIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELST- 259 (551)
Q Consensus 181 ~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~iv~v~~d~~~~~~~~~~~~~~~~av~~~d~~~~~l~~~f~v~~- 259 (551)
.+.++|....-+....+.+.+.+++++++++ +.|+.+|.+.+ .+.+++++||++.
T Consensus 34 ~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk-----i~Fv~vd~~~~-------------------~~~~~l~~fGl~~~ 89 (147)
T 3bj5_A 34 THILLFLPKSVSDYDGKLSNFKTAAESFKGK-----ILFAFIDSDHT-------------------DNQRILEFFGLKKE 89 (147)
T ss_dssp EEEEEECCTTSSSHHHHHHHHHHHHHTTTTT-----CEEEEECTTCG-------------------GGHHHHHHTTCCGG
T ss_pred eEEEEEecCCcHhHHHHHHHHHHHHHHcCCc-----eEEEEEecchH-------------------hHHHHHHHcCCCcc
Confidence 3344455444444667888999999999876 77877776321 1456889999984
Q ss_pred -cceEEEECC--CC-CcccccchhhhhhcCCCCCCCChhhHHHHHHHHHHHHhhhhhhhhhccCC
Q 008845 260 -LPTLVIIGP--DG-KTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGD 320 (551)
Q Consensus 260 -~P~lvi~~~--~g-k~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 320 (551)
+|++++++. ++ ++... .-.++.+.+.+|+....++...+.++|+.++..
T Consensus 90 ~~P~v~i~~~~~~~~Ky~~~------------~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~ 142 (147)
T 3bj5_A 90 ECPAVRLITLEEEMTKYKPE------------SEELTAERITEFCHRFLEGKIKPHLMSQELPED 142 (147)
T ss_dssp GCSEEEEEECSSSCEEECCS------------CCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGG
T ss_pred cCCEEEEEecccccccCCCC------------cccCCHHHHHHHHHHHHcCCccccccCCCCCCC
Confidence 899999974 23 33221 115689999999999999999999999887653
No 497
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.63 E-value=0.00012 Score=63.23 Aligned_cols=62 Identities=18% Similarity=0.291 Sum_probs=42.4
Q ss_pred EEEEecCCCHhhHhhhHHHHHHHHHhcCCCCEEEEEEeCCCC--HHHHHHHHhhCCCCccccCChhhHHHHHhhcCCCCC
Q 008845 23 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDED--DEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGI 100 (551)
Q Consensus 23 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~vv~v~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 100 (551)
++.|+++|||+|+...+.|.++. +.+..++++.+ ... ....+.+.+++.++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~--------i~~~~vdId~~~~~~~-------------------~~~~L~~~~g~~tv 103 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQ-------------------FQDALYKMTGERTV 103 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCTTHHH-------------------HHHHHHHHHSCCCS
T ss_pred EEEEECCCChhHHHHHHHHHHcC--------CCeEEEECccCcCCHH-------------------HHHHHHHHhCCCCc
Confidence 34499999999999999888652 23445556543 111 11347788999999
Q ss_pred cEEEEEcCCCeEEE
Q 008845 101 PHLVILDENGKVLS 114 (551)
Q Consensus 101 P~~~lid~~G~i~~ 114 (551)
|+++ + +|+.+.
T Consensus 104 P~if-i--~G~~ig 114 (146)
T 2ht9_A 104 PRIF-V--NGTFIG 114 (146)
T ss_dssp CEEE-E--TTEEEE
T ss_pred CeEE-E--CCEEEe
Confidence 9985 3 677764
No 498
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.62 E-value=0.00019 Score=64.47 Aligned_cols=41 Identities=17% Similarity=0.398 Sum_probs=34.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS 382 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~ 382 (551)
++++||.|+.-.||+|+++.+.+.++.+++.+. +.++.+.+
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~---~~~~~~~~ 61 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG---AKFQKNHV 61 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT---CEEEEEEC
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc---eEEEEEec
Confidence 688999999999999999999999988887654 56666554
No 499
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.60 E-value=0.00033 Score=63.23 Aligned_cols=39 Identities=15% Similarity=0.087 Sum_probs=32.8
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 008845 339 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS 382 (551)
Q Consensus 339 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~ 382 (551)
++++||.|++.|||+|+++.|.+.++.+++ + +.+..+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~---v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--G---TDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--T---SCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--C---CeEEEEec
Confidence 689999999999999999999999998887 2 44555554
No 500
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.59 E-value=0.00013 Score=61.69 Aligned_cols=62 Identities=16% Similarity=0.229 Sum_probs=41.7
Q ss_pred EEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChHHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcceEE
Q 008845 345 YFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLV 424 (551)
Q Consensus 345 ~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P~~~ 424 (551)
.|+++|||+|++..+.|.++ . +.+..+.+|.+.+. .+....+.+.+++..+|+++
T Consensus 31 vf~~~~Cp~C~~~~~~L~~~----~-----i~~~~vdid~~~~~----------------~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 31 IFSKTSCSYCTMAKKLFHDM----N-----VNYKVVELDLLEYG----------------NQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp EEECSSCSHHHHHHHHHHHH----T-----CCCEEEETTTSTTH----------------HHHHHHHHHHHSSCCSSEEE
T ss_pred EEEcCCChHHHHHHHHHHHc----C-----CCcEEEECcCCcCc----------------HHHHHHHHHHhCCCCcCEEE
Confidence 39999999999999987764 1 33445666654100 00113578889999999985
Q ss_pred EECCCCcEEE
Q 008845 425 AIGPSGRTIT 434 (551)
Q Consensus 425 lid~~G~i~~ 434 (551)
+ +|+.+.
T Consensus 86 -i--~G~~ig 92 (130)
T 2cq9_A 86 -V--NGTFIG 92 (130)
T ss_dssp -E--TTEEEE
T ss_pred -E--CCEEEc
Confidence 4 677665
Done!