Query 008848
Match_columns 551
No_of_seqs 362 out of 3122
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 17:20:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008848.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008848hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03052 acetate--CoA ligase; 100.0 1E-70 2.3E-75 607.4 55.5 546 1-550 4-550 (728)
2 PRK12467 peptide synthase; Pro 100.0 6.6E-62 1.4E-66 615.1 26.6 494 12-551 1405-1918(3956)
3 COG0365 Acs Acyl-coenzyme A sy 100.0 3E-58 6.5E-63 476.3 38.7 360 166-550 1-366 (528)
4 PRK12467 peptide synthase; Pro 100.0 7E-60 1.5E-64 596.7 24.5 492 12-551 340-854 (3956)
5 PRK12316 peptide synthase; Pro 100.0 7.3E-59 1.6E-63 596.3 26.2 493 12-551 340-851 (5163)
6 PRK12316 peptide synthase; Pro 100.0 1.4E-58 3E-63 593.8 25.0 485 12-551 2889-3389(5163)
7 PRK10252 entF enterobactin syn 100.0 2.6E-58 5.6E-63 545.5 24.6 485 12-551 295-802 (1296)
8 PTZ00237 acetyl-CoA synthetase 100.0 2.2E-55 4.9E-60 482.2 44.0 426 118-550 7-458 (647)
9 PRK05691 peptide synthase; Val 100.0 1.1E-57 2.4E-62 581.6 26.8 490 12-551 3551-4066(4334)
10 PRK05691 peptide synthase; Val 100.0 1.2E-57 2.5E-62 581.4 23.6 493 12-551 2019-2532(4334)
11 TIGR03443 alpha_am_amid L-amin 100.0 7.5E-57 1.6E-61 535.2 28.7 510 12-550 80-620 (1389)
12 TIGR02316 propion_prpE propion 100.0 3.8E-54 8.2E-59 472.4 46.0 417 120-550 2-436 (628)
13 PLN02654 acetate-CoA ligase 100.0 3E-54 6.6E-59 474.8 43.9 422 119-550 30-479 (666)
14 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 4.9E-54 1.1E-58 471.9 43.8 420 118-550 4-441 (625)
15 PRK10524 prpE propionyl-CoA sy 100.0 2.9E-53 6.3E-58 466.1 45.0 418 119-550 2-437 (629)
16 PRK03584 acetoacetyl-CoA synth 100.0 4.5E-53 9.7E-58 466.4 46.2 445 84-549 4-461 (655)
17 PRK00174 acetyl-CoA synthetase 100.0 1.3E-52 2.7E-57 461.6 44.8 417 119-550 17-449 (637)
18 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.9E-52 4E-57 459.9 46.1 443 84-547 5-461 (652)
19 KOG1175 Acyl-CoA synthetase [L 100.0 2.8E-48 6E-53 402.5 35.7 426 114-549 6-438 (626)
20 COG1020 EntF Non-ribosomal pep 100.0 7.1E-50 1.5E-54 440.6 25.4 480 13-551 67-567 (642)
21 PRK07788 acyl-CoA synthetase; 100.0 6.6E-47 1.4E-51 409.5 35.1 341 185-550 58-401 (549)
22 PRK04319 acetyl-CoA synthetase 100.0 8E-46 1.7E-50 402.6 38.9 361 166-550 35-401 (570)
23 COG0318 CaiC Acyl-CoA syntheta 100.0 7E-46 1.5E-50 398.2 35.6 341 185-547 20-369 (534)
24 PRK06334 long chain fatty acid 100.0 3.6E-46 7.9E-51 402.0 32.6 342 185-550 28-379 (539)
25 PLN02614 long-chain acyl-CoA s 100.0 1E-45 2.2E-50 406.5 33.8 350 185-550 54-467 (666)
26 KOG1176 Acyl-CoA synthetase [L 100.0 5.9E-45 1.3E-49 379.3 36.2 345 189-550 29-378 (537)
27 PLN02736 long-chain acyl-CoA s 100.0 1.9E-45 4.2E-50 405.0 34.3 351 185-549 53-459 (651)
28 PRK13382 acyl-CoA synthetase; 100.0 5.9E-45 1.3E-49 392.9 35.2 336 185-550 52-390 (537)
29 KOG1177 Long chain fatty acid 100.0 1.2E-45 2.6E-50 359.2 26.6 351 186-550 60-431 (596)
30 PLN02861 long-chain-fatty-acid 100.0 4.9E-45 1.1E-49 401.4 31.2 342 185-540 52-451 (660)
31 PRK07529 AMP-binding domain pr 100.0 3.2E-44 6.9E-49 393.8 37.2 358 186-550 35-416 (632)
32 PRK13295 cyclohexanecarboxylat 100.0 6.7E-44 1.5E-48 385.7 37.7 350 186-550 34-391 (547)
33 PRK06060 acyl-CoA synthetase; 100.0 3E-44 6.6E-49 399.2 34.8 318 188-550 18-338 (705)
34 PTZ00342 acyl-CoA synthetase; 100.0 2.4E-44 5.2E-49 395.5 33.2 338 185-540 70-529 (746)
35 PLN02860 o-succinylbenzoate-Co 100.0 5.8E-44 1.3E-48 387.3 34.2 339 185-542 16-381 (563)
36 PRK07656 long-chain-fatty-acid 100.0 6.9E-43 1.5E-47 375.0 36.5 344 185-550 14-362 (513)
37 COG1022 FAA1 Long-chain acyl-C 100.0 1.1E-43 2.3E-48 372.7 28.7 339 185-547 25-425 (613)
38 PRK07638 acyl-CoA synthetase; 100.0 3.8E-43 8.3E-48 374.6 33.4 323 185-550 10-332 (487)
39 PF00501 AMP-binding: AMP-bind 100.0 3.8E-44 8.3E-49 374.6 24.9 336 185-550 4-358 (417)
40 PLN02246 4-coumarate--CoA liga 100.0 1E-42 2.2E-47 375.7 36.0 339 186-550 33-382 (537)
41 PRK08180 feruloyl-CoA synthase 100.0 5E-43 1.1E-47 383.5 33.4 341 185-542 48-409 (614)
42 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.6E-42 3.4E-47 372.4 36.3 341 186-550 10-353 (515)
43 PTZ00216 acyl-CoA synthetase; 100.0 3.4E-43 7.3E-48 389.3 30.9 344 185-543 78-497 (700)
44 PLN02574 4-coumarate--CoA liga 100.0 1.9E-42 4.1E-47 375.2 35.6 340 187-550 50-400 (560)
45 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3E-42 6.4E-47 372.2 36.8 350 186-550 32-389 (538)
46 PLN02387 long-chain-fatty-acid 100.0 6.2E-43 1.3E-47 386.4 32.1 347 185-543 67-491 (696)
47 PRK05677 long-chain-fatty-acid 100.0 3E-42 6.5E-47 374.0 36.4 345 186-550 34-403 (562)
48 PRK06187 long-chain-fatty-acid 100.0 3.7E-42 8E-47 370.0 35.9 340 185-548 15-362 (521)
49 PRK08314 long-chain-fatty-acid 100.0 3.7E-42 8.1E-47 372.3 35.6 342 186-550 20-383 (546)
50 PRK06839 acyl-CoA synthetase; 100.0 8.3E-42 1.8E-46 365.1 35.3 327 185-550 11-342 (496)
51 PRK03640 O-succinylbenzoic aci 100.0 7E-42 1.5E-46 364.5 33.9 319 185-550 11-331 (483)
52 PRK07008 long-chain-fatty-acid 100.0 1.3E-41 2.9E-46 367.0 36.2 345 186-548 20-379 (539)
53 PRK08315 AMP-binding domain pr 100.0 1.3E-41 2.9E-46 369.0 36.2 354 185-550 25-397 (559)
54 PRK07786 long-chain-fatty-acid 100.0 9.4E-42 2E-46 368.5 34.4 350 172-550 16-370 (542)
55 PRK09274 peptide synthase; Pro 100.0 3.4E-42 7.3E-47 373.0 30.9 340 186-550 16-386 (552)
56 TIGR02262 benz_CoA_lig benzoat 100.0 2.1E-41 4.5E-46 363.2 36.6 349 173-550 3-355 (508)
57 PRK12583 acyl-CoA synthetase; 100.0 2E-41 4.3E-46 367.6 36.8 353 186-550 28-398 (558)
58 PRK08043 bifunctional acyl-[ac 100.0 2.6E-42 5.6E-47 384.1 29.9 331 185-543 213-549 (718)
59 PRK08316 acyl-CoA synthetase; 100.0 2E-41 4.4E-46 364.5 35.8 343 186-550 21-366 (523)
60 PLN02430 long-chain-fatty-acid 100.0 7.7E-42 1.7E-46 375.5 32.5 344 185-540 51-451 (660)
61 PRK07470 acyl-CoA synthetase; 100.0 1.4E-41 3E-46 366.3 33.8 338 186-550 17-365 (528)
62 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2.5E-41 5.3E-46 364.1 35.5 341 186-550 33-378 (527)
63 PRK05605 long-chain-fatty-acid 100.0 2.8E-41 6E-46 367.5 35.6 349 185-550 41-416 (573)
64 PLN02330 4-coumarate--CoA liga 100.0 3.7E-41 8.1E-46 364.2 36.3 340 185-550 37-387 (546)
65 PRK06087 short chain acyl-CoA 100.0 4.5E-41 9.8E-46 363.8 36.5 343 186-550 33-380 (547)
66 PRK06145 acyl-CoA synthetase; 100.0 5E-41 1.1E-45 359.3 36.4 331 185-550 11-344 (497)
67 PRK06018 putative acyl-CoA syn 100.0 3.4E-41 7.3E-46 364.2 35.4 346 185-548 19-379 (542)
68 PRK12476 putative fatty-acid-- 100.0 9.1E-42 2E-46 373.5 31.2 335 186-550 44-428 (612)
69 PRK05851 long-chain-fatty-acid 100.0 4.5E-42 9.9E-47 369.4 27.8 328 185-550 11-371 (525)
70 PRK06155 crotonobetaine/carnit 100.0 4.5E-41 9.9E-46 362.9 35.6 336 185-550 30-368 (542)
71 PRK07769 long-chain-fatty-acid 100.0 1.6E-41 3.5E-46 373.1 31.9 336 186-550 31-417 (631)
72 PRK12492 long-chain-fatty-acid 100.0 6E-41 1.3E-45 363.8 36.0 347 185-550 33-411 (562)
73 PLN03051 acyl-activating enzym 100.0 3E-41 6.6E-46 360.6 33.0 310 240-549 1-315 (499)
74 PRK13383 acyl-CoA synthetase; 100.0 4.2E-41 9E-46 361.4 34.0 322 185-550 44-370 (516)
75 PRK05857 acyl-CoA synthetase; 100.0 3.3E-41 7.1E-46 364.0 33.0 329 185-544 23-361 (540)
76 COG1021 EntE Peptide arylation 100.0 3.3E-42 7.2E-47 327.9 21.5 344 185-550 37-384 (542)
77 PRK08008 caiC putative crotono 100.0 1.3E-40 2.8E-45 357.8 36.2 345 186-550 17-365 (517)
78 PRK12582 acyl-CoA synthetase; 100.0 2.4E-41 5.1E-46 370.9 30.0 340 185-540 58-419 (624)
79 TIGR01734 D-ala-DACP-lig D-ala 100.0 9.7E-41 2.1E-45 357.5 33.2 325 186-550 10-341 (502)
80 PRK07514 malonyl-CoA synthase; 100.0 1.9E-40 4.2E-45 355.3 35.4 330 188-550 14-347 (504)
81 PRK07059 Long-chain-fatty-acid 100.0 2.1E-40 4.6E-45 359.3 36.0 346 186-550 33-405 (557)
82 PRK05852 acyl-CoA synthetase; 100.0 1.7E-40 3.6E-45 358.2 34.9 360 166-550 8-379 (534)
83 TIGR03205 pimA dicarboxylate-- 100.0 2.8E-40 6E-45 357.1 36.6 346 186-550 31-392 (541)
84 PRK10946 entE enterobactin syn 100.0 2.6E-40 5.7E-45 356.7 36.3 336 190-550 37-379 (536)
85 PRK06188 acyl-CoA synthetase; 100.0 1.8E-40 3.9E-45 357.3 35.0 337 186-550 22-364 (524)
86 PRK08633 2-acyl-glycerophospho 100.0 3.7E-41 7.9E-46 395.1 32.0 349 185-550 624-986 (1146)
87 PRK09088 acyl-CoA synthetase; 100.0 4.1E-40 8.9E-45 351.4 35.7 322 185-550 4-331 (488)
88 KOG1256 Long-chain acyl-CoA sy 100.0 1.2E-40 2.5E-45 344.6 29.7 343 185-540 84-486 (691)
89 PRK13390 acyl-CoA synthetase; 100.0 5.5E-40 1.2E-44 351.5 34.8 333 185-550 6-347 (501)
90 PRK05620 long-chain-fatty-acid 100.0 4.9E-40 1.1E-44 357.7 34.8 344 186-547 20-379 (576)
91 PRK08751 putative long-chain f 100.0 5.2E-40 1.1E-44 356.6 34.6 346 186-550 35-407 (560)
92 PRK04813 D-alanine--poly(phosp 100.0 5.7E-40 1.2E-44 351.6 33.4 325 186-550 12-343 (503)
93 PRK07798 acyl-CoA synthetase; 100.0 1.9E-39 4.1E-44 350.0 36.4 340 185-550 12-374 (533)
94 PRK08974 long-chain-fatty-acid 100.0 2.2E-39 4.8E-44 351.6 36.3 346 186-550 33-403 (560)
95 PRK13388 acyl-CoA synthetase; 100.0 2E-39 4.4E-44 349.9 35.7 319 188-546 13-345 (540)
96 PLN03102 acyl-activating enzym 100.0 1.9E-39 4.1E-44 352.8 35.5 309 186-513 24-340 (579)
97 PRK07787 acyl-CoA synthetase; 100.0 1.2E-39 2.6E-44 346.0 33.1 305 186-547 10-315 (471)
98 PRK06710 long-chain-fatty-acid 100.0 1.9E-39 4.1E-44 352.3 33.8 344 186-550 34-402 (563)
99 PRK08279 long-chain-acyl-CoA s 100.0 2E-39 4.3E-44 354.6 34.2 321 185-532 46-369 (600)
100 PRK12406 long-chain-fatty-acid 100.0 5.1E-39 1.1E-43 344.7 36.3 331 193-550 3-349 (509)
101 PRK06178 acyl-CoA synthetase; 100.0 4.3E-39 9.4E-44 349.8 35.5 364 167-550 27-413 (567)
102 PRK07867 acyl-CoA synthetase; 100.0 6.3E-39 1.4E-43 345.0 35.7 320 189-550 16-339 (529)
103 PRK07868 acyl-CoA synthetase; 100.0 2.8E-39 6E-44 368.8 33.9 336 185-550 456-808 (994)
104 PRK13391 acyl-CoA synthetase; 100.0 1.3E-38 2.9E-43 341.7 35.8 337 185-550 6-352 (511)
105 PRK06164 acyl-CoA synthetase; 100.0 7.2E-39 1.6E-43 346.1 33.8 346 185-550 19-376 (540)
106 PLN02479 acetate-CoA ligase 100.0 4.7E-38 1E-42 341.4 35.9 343 185-549 29-398 (567)
107 PRK08308 acyl-CoA synthetase; 100.0 3.5E-38 7.7E-43 329.2 32.1 277 194-543 1-279 (414)
108 TIGR01733 AA-adenyl-dom amino 100.0 4.7E-38 1E-42 327.6 32.7 309 211-550 1-317 (408)
109 PRK06814 acylglycerophosphoeth 100.0 2.4E-38 5.2E-43 370.4 33.7 331 187-542 642-976 (1140)
110 PRK08162 acyl-CoA synthetase; 100.0 2.5E-37 5.5E-42 334.4 36.9 342 186-548 28-383 (545)
111 PRK08276 long-chain-fatty-acid 100.0 1.3E-37 2.7E-42 333.4 33.5 318 209-550 11-339 (502)
112 PRK09192 acyl-CoA synthetase; 100.0 1.4E-37 3E-42 338.6 30.9 331 187-550 32-410 (579)
113 PRK09029 O-succinylbenzoic aci 100.0 2.7E-37 5.8E-42 326.9 30.7 291 186-540 13-304 (458)
114 PRK07768 long-chain-fatty-acid 100.0 2.7E-37 5.8E-42 334.2 30.2 327 186-550 12-385 (545)
115 PRK07445 O-succinylbenzoic aci 100.0 3.5E-37 7.5E-42 324.5 28.6 283 209-546 19-305 (452)
116 TIGR01923 menE O-succinylbenzo 100.0 2E-36 4.4E-41 318.1 31.6 285 211-540 1-287 (436)
117 PRK05850 acyl-CoA synthetase; 100.0 1.5E-36 3.2E-41 330.7 31.3 334 186-550 11-396 (578)
118 KOG1179 Very long-chain acyl-C 100.0 2.9E-36 6.2E-41 299.9 23.8 308 185-512 86-396 (649)
119 KOG1180 Acyl-CoA synthetase [L 100.0 2.6E-35 5.7E-40 291.7 23.2 332 205-549 85-484 (678)
120 PTZ00297 pantothenate kinase; 100.0 2.4E-33 5.2E-38 320.5 31.4 326 185-541 436-816 (1452)
121 TIGR03089 conserved hypothetic 99.9 5E-26 1.1E-30 215.8 23.7 217 185-447 5-227 (227)
122 PRK07824 O-succinylbenzoic aci 99.9 1.4E-21 3.1E-26 199.9 18.8 171 354-540 33-207 (358)
123 TIGR02372 4_coum_CoA_lig 4-cou 99.9 9.4E-22 2E-26 201.3 17.0 168 356-538 95-265 (386)
124 TIGR02155 PA_CoA_ligase phenyl 99.8 2.5E-20 5.3E-25 195.0 17.9 191 354-550 73-272 (422)
125 TIGR03335 F390_ftsA coenzyme F 99.8 1.1E-18 2.4E-23 183.0 18.4 186 353-550 83-277 (445)
126 KOG1178 Non-ribosomal peptide 99.7 5.5E-17 1.2E-21 177.8 12.5 281 205-513 65-369 (1032)
127 KOG3628 Predicted AMP-binding 99.7 2.1E-15 4.6E-20 160.7 23.7 263 185-462 779-1053(1363)
128 COG1541 PaaK Coenzyme F390 syn 99.4 3E-12 6.5E-17 128.7 17.2 192 352-549 86-284 (438)
129 TIGR02304 aden_form_hyp probab 99.1 7.5E-10 1.6E-14 114.1 15.6 145 358-509 101-249 (430)
130 PF13745 HxxPF_rpt: HxxPF-repe 99.1 6.5E-13 1.4E-17 107.1 -6.1 84 41-132 1-91 (91)
131 KOG3628 Predicted AMP-binding 98.6 6.1E-07 1.3E-11 97.3 12.8 272 187-487 105-414 (1363)
132 PF04443 LuxE: Acyl-protein sy 98.1 3.4E-05 7.3E-10 78.1 13.7 188 353-550 86-302 (365)
133 COG1541 PaaK Coenzyme F390 syn 93.8 0.25 5.5E-06 50.7 8.3 82 208-290 108-192 (438)
134 TIGR03335 F390_ftsA coenzyme F 80.2 18 0.00039 38.1 11.5 95 191-289 86-185 (445)
135 TIGR03089 conserved hypothetic 73.6 18 0.00039 34.1 8.4 76 189-281 148-226 (227)
136 TIGR02155 PA_CoA_ligase phenyl 73.3 19 0.00041 37.5 9.3 98 191-290 75-177 (422)
137 PF00501 AMP-binding: AMP-bind 72.3 25 0.00055 36.2 10.0 89 354-451 8-99 (417)
138 PLN02736 long-chain acyl-CoA s 64.5 56 0.0012 36.3 11.2 102 374-480 77-181 (651)
139 PRK07656 long-chain-fatty-acid 63.8 75 0.0016 33.7 11.7 85 375-460 30-117 (513)
140 PRK09274 peptide synthase; Pro 62.5 50 0.0011 35.6 10.1 98 355-453 20-121 (552)
141 PLN03052 acetate--CoA ligase; 60.2 82 0.0018 35.6 11.5 99 354-454 188-289 (728)
142 PTZ00237 acetyl-CoA synthetase 59.5 88 0.0019 34.7 11.6 95 355-453 75-172 (647)
143 PRK00174 acetyl-CoA synthetase 58.9 77 0.0017 35.0 11.0 97 354-454 80-179 (637)
144 TIGR02188 Ac_CoA_lig_AcsA acet 58.8 80 0.0017 34.8 11.1 97 354-454 70-169 (625)
145 PRK10524 prpE propionyl-CoA sy 58.7 86 0.0019 34.5 11.3 96 354-453 66-164 (629)
146 PRK06334 long chain fatty acid 57.9 77 0.0017 34.2 10.6 83 376-459 46-128 (539)
147 PRK13295 cyclohexanecarboxylat 57.9 67 0.0014 34.6 10.1 97 354-454 37-136 (547)
148 PLN02387 long-chain-fatty-acid 57.6 81 0.0018 35.4 11.0 103 374-481 105-210 (696)
149 PLN02654 acetate-CoA ligase 57.4 95 0.0021 34.6 11.4 96 355-454 103-201 (666)
150 PRK08008 caiC putative crotono 57.4 77 0.0017 33.7 10.5 100 354-458 20-122 (517)
151 PRK06187 long-chain-fatty-acid 57.3 86 0.0019 33.2 10.8 84 376-460 32-118 (521)
152 PF03321 GH3: GH3 auxin-respon 57.1 5 0.00011 43.2 1.2 32 352-383 76-108 (528)
153 PLN02246 4-coumarate--CoA liga 56.8 73 0.0016 34.2 10.2 97 354-458 36-135 (537)
154 PRK03584 acetoacetyl-CoA synth 56.2 1E+02 0.0022 34.2 11.4 95 355-454 98-195 (655)
155 PRK06839 acyl-CoA synthetase; 56.1 99 0.0021 32.6 11.0 96 354-459 15-114 (496)
156 PRK07798 acyl-CoA synthetase; 55.8 1E+02 0.0022 32.8 11.1 86 374-460 27-115 (533)
157 KOG1177 Long chain fatty acid 54.9 74 0.0016 33.3 8.8 108 373-481 75-199 (596)
158 PRK05857 acyl-CoA synthetase; 54.2 76 0.0016 34.2 9.8 94 354-455 27-123 (540)
159 PRK07788 acyl-CoA synthetase; 54.0 72 0.0016 34.3 9.6 85 375-460 74-161 (549)
160 PRK04319 acetyl-CoA synthetase 53.2 75 0.0016 34.5 9.6 85 374-459 72-159 (570)
161 PRK08315 AMP-binding domain pr 53.1 1.8E+02 0.0038 31.4 12.5 97 189-289 197-298 (559)
162 PRK13388 acyl-CoA synthetase; 53.1 1.2E+02 0.0027 32.5 11.2 84 375-459 26-113 (540)
163 KOG1176 Acyl-CoA synthetase [L 52.6 74 0.0016 34.3 9.0 89 373-462 43-136 (537)
164 PTZ00342 acyl-CoA synthetase; 52.2 1.6E+02 0.0034 33.4 12.1 118 354-480 74-208 (746)
165 PF11974 MG1: Alpha-2-macroglo 51.7 9.2 0.0002 30.7 1.6 26 526-551 23-49 (97)
166 TIGR01217 ac_ac_CoA_syn acetoa 51.7 1.3E+02 0.0028 33.4 11.3 93 356-453 99-194 (652)
167 PRK08751 putative long-chain f 51.1 98 0.0021 33.4 10.1 95 354-458 38-136 (560)
168 PRK13383 acyl-CoA synthetase; 50.6 78 0.0017 33.7 9.1 84 375-459 60-146 (516)
169 TIGR02316 propion_prpE propion 49.9 93 0.002 34.3 9.8 96 354-453 65-163 (628)
170 PRK06155 crotonobetaine/carnit 49.8 1.1E+02 0.0023 33.1 10.1 85 375-460 46-133 (542)
171 PRK08279 long-chain-acyl-CoA s 49.4 1.3E+02 0.0029 32.7 10.9 96 354-459 50-148 (600)
172 PRK08314 long-chain-fatty-acid 49.3 1.2E+02 0.0026 32.6 10.4 84 375-459 35-122 (546)
173 PRK07529 AMP-binding domain pr 49.0 1.3E+02 0.0027 33.3 10.6 96 354-452 38-136 (632)
174 PRK08276 long-chain-fatty-acid 48.8 99 0.0021 32.8 9.6 84 375-459 11-97 (502)
175 PRK05677 long-chain-fatty-acid 48.0 1.1E+02 0.0025 33.0 10.0 83 374-457 48-134 (562)
176 PRK13391 acyl-CoA synthetase; 47.7 1.5E+02 0.0033 31.4 10.8 97 354-458 10-109 (511)
177 TIGR01733 AA-adenyl-dom amino 46.9 87 0.0019 31.9 8.6 67 392-459 20-86 (408)
178 TIGR03443 alpha_am_amid L-amin 46.7 1E+02 0.0022 37.8 10.3 98 354-452 249-349 (1389)
179 PLN02614 long-chain acyl-CoA s 46.5 1.8E+02 0.0039 32.4 11.3 85 375-460 79-166 (666)
180 TIGR03098 ligase_PEP_1 acyl-Co 46.3 89 0.0019 33.1 8.8 84 375-459 25-111 (515)
181 PRK07514 malonyl-CoA synthase; 46.2 1E+02 0.0022 32.7 9.1 86 373-459 26-114 (504)
182 PRK07059 Long-chain-fatty-acid 46.0 1.3E+02 0.0029 32.4 10.1 94 354-457 36-132 (557)
183 PLN02430 long-chain-fatty-acid 46.0 1.7E+02 0.0037 32.6 11.0 119 355-479 56-179 (660)
184 PRK05605 long-chain-fatty-acid 45.3 1.1E+02 0.0024 33.1 9.4 84 375-459 57-143 (573)
185 PLN02330 4-coumarate--CoA liga 44.7 1.2E+02 0.0026 32.6 9.6 96 354-457 41-139 (546)
186 PRK08316 acyl-CoA synthetase; 44.7 1.1E+02 0.0023 32.6 9.1 86 374-460 35-123 (523)
187 PLN03102 acyl-activating enzym 44.5 94 0.002 33.9 8.7 93 354-456 27-122 (579)
188 PRK06164 acyl-CoA synthetase; 44.1 1.2E+02 0.0026 32.5 9.4 91 354-454 23-116 (540)
189 PRK12583 acyl-CoA synthetase; 43.5 3.3E+02 0.0072 29.2 12.8 99 188-290 198-301 (558)
190 PLN02249 indole-3-acetic acid- 43.2 11 0.00024 41.1 1.1 30 353-382 97-127 (597)
191 TIGR03208 cyc_hxne_CoA_lg cycl 43.1 1.6E+02 0.0034 31.6 10.1 97 354-454 35-134 (538)
192 PLN02247 indole-3-acetic acid- 42.8 21 0.00046 38.8 3.1 28 354-381 87-115 (606)
193 PLN02574 4-coumarate--CoA liga 42.6 1.2E+02 0.0026 32.8 9.1 98 354-459 52-153 (560)
194 PRK09088 acyl-CoA synthetase; 42.5 1.9E+02 0.0042 30.4 10.5 92 354-453 8-102 (488)
195 PRK12492 long-chain-fatty-acid 42.4 1.1E+02 0.0023 33.2 8.7 81 374-455 48-132 (562)
196 PRK05620 long-chain-fatty-acid 41.9 2E+02 0.0044 31.1 10.8 99 354-459 23-125 (576)
197 PRK07008 long-chain-fatty-acid 41.8 1.6E+02 0.0034 31.7 9.8 99 188-289 173-276 (539)
198 PF09664 DUF2399: Protein of u 41.7 2.4E+02 0.0053 24.7 11.8 112 373-494 21-135 (152)
199 PRK13390 acyl-CoA synthetase; 41.6 2.3E+02 0.0051 29.9 11.1 93 354-454 10-105 (501)
200 PRK02261 methylaspartate mutas 41.5 2.3E+02 0.0049 24.3 8.8 46 407-452 15-61 (137)
201 PRK08162 acyl-CoA synthetase; 40.5 1.3E+02 0.0027 32.4 8.8 84 375-459 43-129 (545)
202 COG4009 Uncharacterized protei 40.5 86 0.0019 23.8 5.0 64 209-283 9-76 (88)
203 COG0318 CaiC Acyl-CoA syntheta 40.4 2.8E+02 0.0061 29.8 11.5 93 354-454 24-119 (534)
204 PRK13382 acyl-CoA synthetase; 40.1 1.6E+02 0.0034 31.7 9.5 82 375-457 68-152 (537)
205 PLN02861 long-chain-fatty-acid 39.8 1.6E+02 0.0035 32.7 9.7 86 374-460 76-164 (660)
206 PRK09162 hypoxanthine-guanine 39.4 79 0.0017 28.6 5.9 44 209-253 16-60 (181)
207 PLN02479 acetate-CoA ligase 39.3 1.7E+02 0.0036 31.8 9.6 93 354-456 33-128 (567)
208 TIGR01923 menE O-succinylbenzo 37.8 1.4E+02 0.0029 30.9 8.3 66 388-454 15-80 (436)
209 PRK07470 acyl-CoA synthetase; 37.7 1.7E+02 0.0036 31.3 9.2 82 374-456 31-115 (528)
210 PRK12406 long-chain-fatty-acid 37.3 1.4E+02 0.0031 31.6 8.6 84 375-459 11-97 (509)
211 PLN03051 acyl-activating enzym 36.6 2.8E+02 0.0061 29.4 10.7 98 189-290 117-218 (499)
212 PLN02860 o-succinylbenzoate-Co 36.2 1.3E+02 0.0027 32.7 8.0 79 375-454 32-113 (563)
213 TIGR02262 benz_CoA_lig benzoat 36.0 2.1E+02 0.0046 30.2 9.7 96 354-459 18-116 (508)
214 PLN02620 indole-3-acetic acid- 34.9 39 0.00084 36.8 3.6 30 354-383 99-129 (612)
215 PRK12476 putative fatty-acid-- 33.8 4.4E+02 0.0096 28.8 11.9 101 354-458 47-155 (612)
216 PRK06018 putative acyl-CoA syn 33.8 1.5E+02 0.0032 31.9 8.0 84 374-458 38-124 (542)
217 PRK05850 acyl-CoA synthetase; 33.7 5.1E+02 0.011 27.9 12.4 102 354-459 14-123 (578)
218 PRK06178 acyl-CoA synthetase; 33.7 2.3E+02 0.0049 30.6 9.5 85 375-460 58-145 (567)
219 TIGR02370 pyl_corrinoid methyl 33.3 3.8E+02 0.0081 24.5 9.5 90 398-489 85-183 (197)
220 PRK13237 tyrosine phenol-lyase 32.1 2.1E+02 0.0045 30.2 8.2 46 230-280 114-174 (460)
221 PRK08974 long-chain-fatty-acid 32.0 2.2E+02 0.0047 30.7 9.0 80 375-455 48-131 (560)
222 PRK08308 acyl-CoA synthetase; 32.0 5.7E+02 0.012 26.1 12.1 97 189-290 99-200 (414)
223 PRK11706 TDP-4-oxo-6-deoxy-D-g 31.5 1.6E+02 0.0034 30.1 7.4 59 225-287 62-126 (375)
224 TIGR02379 ECA_wecE TDP-4-keto- 31.3 1.4E+02 0.0031 30.5 7.0 60 224-287 61-126 (376)
225 PRK06087 short chain acyl-CoA 31.1 1.7E+02 0.0037 31.4 8.0 90 354-452 36-128 (547)
226 KOG0633 Histidinol phosphate a 30.7 56 0.0012 31.2 3.4 68 222-289 98-169 (375)
227 PRK03640 O-succinylbenzoic aci 30.5 2.8E+02 0.006 29.1 9.4 93 354-456 15-110 (483)
228 PRK06188 acyl-CoA synthetase; 30.3 2.1E+02 0.0046 30.4 8.5 80 374-454 36-118 (524)
229 PRK08043 bifunctional acyl-[ac 30.1 5.9E+02 0.013 28.6 12.3 98 188-289 362-464 (718)
230 PRK07867 acyl-CoA synthetase; 30.0 2.8E+02 0.0061 29.7 9.4 83 375-458 28-114 (529)
231 PRK10696 tRNA 2-thiocytidine b 30.0 5E+02 0.011 24.8 10.4 77 211-287 4-94 (258)
232 PRK07638 acyl-CoA synthetase; 29.8 4.5E+02 0.0098 27.5 10.9 95 191-290 143-241 (487)
233 PF01041 DegT_DnrJ_EryC1: DegT 29.3 1.2E+02 0.0026 30.8 6.1 63 221-287 52-120 (363)
234 COG0399 WecE Predicted pyridox 28.6 2.2E+02 0.0048 29.1 7.6 64 220-287 60-129 (374)
235 PRK05852 acyl-CoA synthetase; 28.3 2.5E+02 0.0054 30.0 8.7 76 375-451 43-121 (534)
236 PF02310 B12-binding: B12 bind 27.8 2.9E+02 0.0063 22.4 7.2 48 405-452 10-58 (121)
237 PRK08633 2-acyl-glycerophospho 27.3 3.8E+02 0.0083 31.9 10.7 99 353-460 627-727 (1146)
238 PRK06060 acyl-CoA synthetase; 27.3 2.8E+02 0.006 31.1 9.0 92 354-456 19-113 (705)
239 PRK06702 O-acetylhomoserine am 27.2 3.2E+02 0.0068 28.7 8.7 61 226-288 93-155 (432)
240 TIGR03590 PseG pseudaminic aci 26.9 3.5E+02 0.0076 26.3 8.6 75 209-289 11-89 (279)
241 PTZ00216 acyl-CoA synthetase; 26.7 3.2E+02 0.0069 30.6 9.4 88 372-460 118-208 (700)
242 PRK15423 hypoxanthine phosphor 26.6 1.5E+02 0.0033 26.7 5.5 43 209-251 8-52 (178)
243 cd01519 RHOD_HSP67B2 Member of 26.6 2.3E+02 0.0049 22.4 6.2 50 209-258 37-91 (106)
244 TIGR01734 D-ala-DACP-lig D-ala 26.5 2.3E+02 0.0049 29.9 7.9 79 375-454 25-106 (502)
245 TIGR01139 cysK cysteine syntha 25.5 4.7E+02 0.01 25.6 9.4 68 221-289 44-112 (298)
246 PLN02565 cysteine synthase 25.4 3.9E+02 0.0085 26.6 8.8 60 230-289 63-122 (322)
247 TIGR02080 O_succ_thio_ly O-suc 25.3 3.6E+02 0.0079 27.6 8.8 57 230-287 87-143 (382)
248 PRK07786 long-chain-fatty-acid 25.1 3.5E+02 0.0075 29.0 9.1 82 375-457 42-126 (542)
249 PF03790 KNOX1: KNOX1 domain ; 24.8 82 0.0018 21.2 2.4 20 240-259 10-29 (45)
250 TIGR01136 cysKM cysteine synth 24.7 4.9E+02 0.011 25.5 9.3 78 210-289 35-113 (299)
251 PLN02556 cysteine synthase/L-3 24.3 3.7E+02 0.008 27.5 8.4 68 221-288 97-165 (368)
252 PF00818 Ice_nucleation: Ice n 24.0 33 0.00073 17.4 0.4 9 503-511 1-9 (16)
253 TIGR03205 pimA dicarboxylate-- 23.9 3.1E+02 0.0068 29.3 8.4 78 375-453 46-126 (541)
254 PF00455 DeoRC: DeoR C termina 23.9 2E+02 0.0043 25.4 5.7 84 418-509 15-106 (161)
255 COG0399 WecE Predicted pyridox 23.8 7.6E+02 0.016 25.3 10.4 34 392-429 69-102 (374)
256 PF06277 EutA: Ethanolamine ut 23.4 3.7E+02 0.008 28.4 8.1 56 188-250 370-425 (473)
257 PRK06710 long-chain-fatty-acid 23.3 2.7E+02 0.0059 30.0 7.8 81 375-456 49-132 (563)
258 PRK04813 D-alanine--poly(phosp 23.1 3E+02 0.0064 28.9 8.0 78 375-453 27-107 (503)
259 PRK09029 O-succinylbenzoic aci 22.8 3.6E+02 0.0078 28.0 8.5 78 375-453 28-108 (458)
260 PRK12582 acyl-CoA synthetase; 22.8 3.2E+02 0.007 30.0 8.4 95 354-452 62-164 (624)
261 PF08734 GYD: GYD domain; Int 22.8 1.9E+02 0.004 22.8 4.7 48 230-277 43-91 (91)
262 PLN02356 phosphateglycerate ki 22.5 3.8E+02 0.0083 27.9 8.2 58 230-288 101-158 (423)
263 COG1167 ARO8 Transcriptional r 22.3 4.2E+02 0.009 28.0 8.7 59 393-455 175-236 (459)
264 TIGR01203 HGPRTase hypoxanthin 22.2 2.3E+02 0.0049 25.2 5.7 21 209-229 2-22 (166)
265 PRK06381 threonine synthase; V 22.0 3.4E+02 0.0073 26.9 7.6 57 233-289 62-118 (319)
266 TIGR02275 DHB_AMP_lig 2,3-dihy 22.0 3E+02 0.0066 29.3 7.8 79 375-454 48-129 (527)
267 PRK08180 feruloyl-CoA synthase 21.9 3.4E+02 0.0074 29.7 8.3 95 354-453 52-154 (614)
268 PRK08045 cystathionine gamma-s 21.9 4.9E+02 0.011 26.7 8.9 57 230-288 88-145 (386)
269 PRK08574 cystathionine gamma-s 21.8 4E+02 0.0086 27.4 8.2 57 230-288 89-145 (385)
270 PRK14057 epimerase; Provisiona 21.6 4.5E+02 0.0098 25.2 7.8 60 232-291 98-167 (254)
271 cd06448 L-Ser-dehyd Serine deh 21.5 3.6E+02 0.0079 26.8 7.7 56 233-289 51-106 (316)
272 PRK09192 acyl-CoA synthetase; 21.3 5.4E+02 0.012 27.8 9.7 86 373-459 47-142 (579)
273 PF09153 DUF1938: Domain of un 21.2 1.4E+02 0.003 23.0 3.4 47 192-243 15-62 (86)
274 PF07210 DUF1416: Protein of u 21.0 87 0.0019 24.2 2.3 19 526-544 16-34 (85)
275 PLN02409 serine--glyoxylate am 20.8 4.9E+02 0.011 26.8 8.8 74 214-288 39-115 (401)
276 TIGR03588 PseC UDP-4-keto-6-de 20.7 4.3E+02 0.0092 26.9 8.3 65 220-287 55-128 (380)
277 PLN02238 hypoxanthine phosphor 20.7 2.3E+02 0.005 25.8 5.6 42 209-251 11-53 (189)
278 COG0365 Acs Acyl-coenzyme A sy 20.7 6E+02 0.013 27.5 9.4 95 359-458 27-125 (528)
279 PRK07769 long-chain-fatty-acid 20.5 1.1E+03 0.023 25.8 12.0 100 354-457 34-141 (631)
280 COG1022 FAA1 Long-chain acyl-C 20.5 1.1E+03 0.024 26.1 11.4 101 187-290 187-289 (613)
281 PRK10719 eutA reactivating fac 20.5 4.2E+02 0.0091 28.0 7.8 55 190-251 373-427 (475)
282 PRK05939 hypothetical protein; 20.3 4.2E+02 0.0092 27.3 8.1 63 224-288 77-139 (397)
283 PLN03013 cysteine synthase 20.1 5.5E+02 0.012 26.9 8.7 80 209-289 150-230 (429)
No 1
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1e-70 Score=607.40 Aligned_cols=546 Identities=60% Similarity=1.048 Sum_probs=454.0
Q ss_pred CCCcccccchHHHHhhCCCchHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCC
Q 008848 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIK 80 (551)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~ 80 (551)
|||++.++.+++|+++++..++++.|.++|+++..... ..-..++-.. ..+.|+|..+.+.|+|+.|.++-++.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (728)
T PLN03052 4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAG-ASPPSIWRRI-SQSLLTPSHPFALHQLMYYSCYKNWDSDTL 81 (728)
T ss_pred ccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhc-CCchHHHHHH-HHHhcCCCCCccHHHHhhhhcccCCCcccc
Confidence 79999999999999999999999999999999996665 3556677777 788999999999999988899989877655
Q ss_pred CCCccccCCcchhccccHHHHHHHhCCccccccCCCCccchHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCC
Q 008848 81 GPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK 160 (551)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 160 (551)
++...|.|+.....++.+..+++..+.......|...+.+|+.|+++++++++.||..+++.+.+.|++++.++++..+.
T Consensus 82 ~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~ 161 (728)
T PLN03052 82 GPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDE 161 (728)
T ss_pred CCCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCCC
Confidence 56688999988888899988888765433333366667889999999999999999999999989999999999875323
Q ss_pred CCCCCCcCCCCcchhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 008848 161 SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (551)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~ 239 (551)
..+..+||+++.+|++++|++++. +++||++|+++.+++..++..+++||+||+++++++|++|+++ +++||+|+++
T Consensus 162 ~~~~~~wf~g~~ln~~~~~l~~~~--~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~ 239 (728)
T PLN03052 162 SNPGGQWLPGAVLNVAECCLTPKP--SKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239 (728)
T ss_pred CCCCCEECCCCEeEHHHHHHHHHh--ccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 445679999999999999998754 5689999999976532234567899999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCC
Q 008848 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (551)
Q Consensus 240 ~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~ 319 (551)
++|++++++++|||+++|++++|++|.++++++.+++++++++++|+++.+.++++.++...++.+....+++++.....
T Consensus 240 ~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~ 319 (728)
T PLN03052 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGK 319 (728)
T ss_pred eCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999998877788788777776655555555544321
Q ss_pred CCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCE
Q 008848 320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV 399 (551)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 399 (551)
...........+|++++.................++++++||+|||||||+||||+++|++++..+......++++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~ 399 (728)
T PLN03052 320 SVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI 399 (728)
T ss_pred ccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcE
Confidence 11111112345677776543210001112222335689999999999999999999999998877766666688999999
Q ss_pred EEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEee
Q 008848 400 YCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (551)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~g 479 (551)
++++++++|+++.+.++.+|++|++++++++.+++..+++++++++||++.++|++++.|.+.......++++||.+++|
T Consensus 400 ~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~ 479 (728)
T PLN03052 400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479 (728)
T ss_pred EEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence 99999999999998888999999999999877777889999999999999999999999987654456789999999999
Q ss_pred cCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
||+++++...|+...++..+++|.||+||++++++...+..+...+++|+|++|++++|+|++|+++|.|+
T Consensus 480 Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~ 550 (728)
T PLN03052 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDA 550 (728)
T ss_pred CCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCC
Confidence 99999999888887766568999999999986555444444556789999999999999999999999874
No 2
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=6.6e-62 Score=615.07 Aligned_cols=494 Identities=17% Similarity=0.169 Sum_probs=393.3
Q ss_pred HHHhhCCCchHHHHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCC-----Ccc
Q 008848 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-----PLY 85 (551)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~-----~~~ 85 (551)
+.+|++++++.+.+|.++|++++++..++ +||++||++ |++.+++.|..+++|| ||+||++++..... ...
T Consensus 1405 NtlplR~~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~-i~~~l~~~r~~~~~pL--Fq~~~~~~~~~~~~~~~~~~~~ 1481 (3956)
T PRK12467 1405 NTQVLRAEVDGQASFQQLLQQVKQAALEAQAHQDLPFEQ-LVEALQPERSLSHSPL--FQVMFNHQRDDHQAQAQLPGLS 1481 (3956)
T ss_pred eeeEEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHHhcccccCCCCCc--eeEEEEeecccccccccCCCce
Confidence 44678899999999999999999998888 999999999 9999999999999999 99999998753221 111
Q ss_pred --ccCCcchhccccHHHHHHHhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeecccccc--ccCCCC
Q 008848 86 --WFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDK 160 (551)
Q Consensus 86 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~ 160 (551)
........++|||++.+.+.++++.+.+ |+. ++|++.+++++.++|.++++++..+++.+...+ +...+.
T Consensus 1482 ~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~~ 1556 (3956)
T PRK12467 1482 VESLSWESQTAQFDLTLDTYESSEGLQASLTYAT-----DLFEASTIERLAGHWLNLLQGLVADPERRLGELDLLDEAER 1556 (3956)
T ss_pred eEeeecCCcccccceEEEEEecCCeEEEEEEEeC-----CcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccccchHHh
Confidence 1111234678899988877777888888 999 999999999999999999999986655554432 333333
Q ss_pred CCCCCCcCCCCcchhhhhhccc--cccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEE
Q 008848 161 SKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237 (551)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~ 237 (551)
......|+.+........+++. ..+++++|+++|+++.++ .+||+||+++++++|++|+++ +++|++|+
T Consensus 1557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~ 1628 (3956)
T PRK12467 1557 RQILEGWNATHTGYPLARLVHQLIEDQAAATPEAVALVFGEQ--------ELTYGELNRRANRLAHRLIALGVGPEVLVG 1628 (3956)
T ss_pred hhhHHhhcCCccCCCccccHHHHHHHHHHhCCCCeEEEeCCc--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 3334456654332222222222 235689999999999776 999999999999999999999 99999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCC
Q 008848 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI 317 (551)
Q Consensus 238 i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 317 (551)
|+++|++++++++|||+|+|++|+|+||.+|.+|+.+++++++++++|++..... .+........+.+...
T Consensus 1629 l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~ 1699 (3956)
T PRK12467 1629 IAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQA---------RLPLPDGLRSLVLDQE 1699 (3956)
T ss_pred EEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhh---------hCccccCCcEEEeccc
Confidence 9999999999999999999999999999999999999999999999999875321 0100001112222110
Q ss_pred CCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCC
Q 008848 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (551)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (551)
.++..... ...+.....++++|||+|||||||+||||+++|+++++.+.+....++++++
T Consensus 1700 ---------------~~~~~~~~-----~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~ 1759 (3956)
T PRK12467 1700 ---------------DDWLEGYS-----DSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAA 1759 (3956)
T ss_pred ---------------cchhccCC-----CCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcc
Confidence 01111111 1112234467899999999999999999999999999999988888999999
Q ss_pred CEEEEecCcccchhhHHHHHHHHhCCEEEEecCC--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccE
Q 008848 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRS 475 (551)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~ 475 (551)
|++++++|++||++++++|.+|++|+++++.+.. .++..+++.|++++||++.++|++++.|.+... ...++++||.
T Consensus 1760 d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~ 1838 (3956)
T PRK12467 1760 DVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRR 1838 (3956)
T ss_pred cEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceE
Confidence 9999999999999999999999999999998642 478899999999999999999999999986422 2345789999
Q ss_pred EEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcC----CCCCcCccCCCCCCceEEEECCCCCccCCCCC
Q 008848 476 FASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYVRTFS 551 (551)
Q Consensus 476 i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv~ 551 (551)
+++|||++++++.+.|.+.+++.+++|.||+||+++.++..... ......+||+|++|++++|+|++++++|+|+.
T Consensus 1839 v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~~ 1918 (3956)
T PRK12467 1839 VVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGVA 1918 (3956)
T ss_pred EEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCCc
Confidence 99999999999999988888777899999999998765543221 11235789999999999999999999999973
No 3
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=3e-58 Score=476.26 Aligned_cols=360 Identities=26% Similarity=0.394 Sum_probs=309.9
Q ss_pred CcCCCCcchhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCC
Q 008848 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMT 243 (551)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~ 243 (551)
+|+.++.+|.+++|++++.. ...+|++|+++.++. +..+++||+||.+.++++|+.|++. + +||||+|+||+.
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~-~~~~~~~aii~~~e~---~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~ 75 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLE-ADRPDDTAIIFDGED---GLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNS 75 (528)
T ss_pred CCcCCceeechhhhhhhhhh-ccCCCceEEEEEcCC---CCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCC
Confidence 48999999999999998752 234899999998761 2227999999999999999999975 7 999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCC
Q 008848 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323 (551)
Q Consensus 244 ~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~ 323 (551)
+|.+++||||+|+||+++|+.+.++++.+++++++++++++|+++...+.++.++....+.+.... ++++....
T Consensus 76 pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~-~iv~~r~~----- 149 (528)
T COG0365 76 PEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS-VVVVPRLG----- 149 (528)
T ss_pred HHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc-eEEecccc-----
Confidence 999999999999999999999999999999999999999999999999999888887777665544 44443321
Q ss_pred CCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHH-HhhhhcCCCCCCEEEE
Q 008848 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCW 402 (551)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~l~ 402 (551)
..|+++...... ..+....+++|++||+|||||||+||||+++|++++.... .....+.+.++|++++
T Consensus 150 ------~~~~~~~~~~~~-----~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~ 218 (528)
T COG0365 150 ------LWYDEAVEKASE-----KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWN 218 (528)
T ss_pred ------ccHHHHhhccCC-----CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEe
Confidence 567777765443 2334457889999999999999999999999998765544 4445678889999999
Q ss_pred ecCcccchhhHH-HHHHHHhCCEEEEecCCCC--hhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEee
Q 008848 403 PTNLGWVMGPVI-LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (551)
Q Consensus 403 ~~~~~~~~~~~~-~~~~l~~G~~lvl~~~~~~--~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~g 479 (551)
.++++|.+|.+. +|++|++|++++++++.++ +..++++|++++||+++++|+.+++|.+......+++++||.+.++
T Consensus 219 ~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~Sa 298 (528)
T COG0365 219 SSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSA 298 (528)
T ss_pred CCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeecc
Confidence 999999999975 8999999999999987664 8899999999999999999999999998876667899999999999
Q ss_pred cCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
||||+++.++|+.+.++ ++|.+.||+||++++.....+ +.+.++.|+|+||.++.|+|++|+++|+|.
T Consensus 299 GEPLnpe~~~w~~~~~g-~~i~d~~gqTEtg~~~~~~~~--~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~ 366 (528)
T COG0365 299 GEPLNPEAFEWFYSALG-VWILDIYGQTETGMGFIAGRP--PVKNGSSGLPLPGYAVRRVDDEGNPVPPGV 366 (528)
T ss_pred CCCCCHHHHHHHHHHhC-CCEeccccccccCccccCCCC--CcCCCCCCCCCCCceeEEECCCCCcCCCCc
Confidence 99999999999999987 999999999999966555444 445556699999999999999999999873
No 4
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7e-60 Score=596.71 Aligned_cols=492 Identities=21% Similarity=0.238 Sum_probs=391.4
Q ss_pred HHHhhCCCchHHHHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCC--------
Q 008848 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-------- 82 (551)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~-------- 82 (551)
+.++++++.+.+.+|.++|+++++...++ +||++||++ |++.+++.|..+.+|+ ||+||++++.....
T Consensus 340 Ntlplrv~~~~~~t~~~ll~~v~~~~~~a~~hq~~p~~~-l~~~l~~~~~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~ 416 (3956)
T PRK12467 340 NTQVLKAEVDPQASFLELLQQVKRTALGAQAHQDLPFEQ-LVEALQPERSLSHSPL--FQVMFNHQNTATGGRDREGAQL 416 (3956)
T ss_pred eeeeeEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhCCCCCCCCCCc--eEEEEEeecccccccccccccC
Confidence 45788999999999999999999998887 999999999 9999999999999999 99999998754321
Q ss_pred -Cc--cccCCcchhccccHHHHHHHhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeecccccc--cc
Q 008848 83 -PL--YWFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LD 156 (551)
Q Consensus 83 -~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--l~ 156 (551)
.. ..........++||++.+.+.++++.+.+ |++ ++|++.+++++.++|.++++++..++..+...+ ++
T Consensus 417 ~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~lf~~~~~~~~~~~~~~~l~~~~~~~~~~i~~l~l~~ 491 (3956)
T PRK12467 417 PGLTVEELSWARHTAQFDLALDTYESAQGLWAAFTYAT-----DLFEATTIERLATHWRNLLEAIVAEPRRRLGELPLLD 491 (3956)
T ss_pred CCceEEEeecCCCceeeeeEEEEEecCCcEEEEEEEec-----ccCCHHHHHHHHHHHHHHHHHHhhCcccceeccccCC
Confidence 00 01111234568899888877788888888 999 999999999999999999999886655554433 23
Q ss_pred CCCCCCCCCCcCCCCcchhhhhhccc--cccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCC
Q 008848 157 RTDKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKG 233 (551)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~g 233 (551)
..++......|+...... ...+++. ..+++++||++|+++.++ ++||+||+++++++|++|++. +++|
T Consensus 492 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~pd~~Al~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g 562 (3956)
T PRK12467 492 AEERARELVRWNAPATEY-APDCVHQLIEAQARQHPERPALVFGEQ--------VLSYAELNRQANRLAHVLIAAGVGPD 562 (3956)
T ss_pred HHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHHCCCCeEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCC
Confidence 222222234565443221 2222222 235689999999999877 999999999999999999999 9999
Q ss_pred CEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEE
Q 008848 234 DAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV 313 (551)
Q Consensus 234 d~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~v 313 (551)
++|+|+++|++++++++|||+|+|++|+|+||.+|.+++.+++++++++++++++.... ..........+.
T Consensus 563 ~~V~i~~~~s~~~vv~~lail~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~---------~~~~~~~~~~~~ 633 (3956)
T PRK12467 563 VLVGIAVERSIEMVVGLLAVLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLA---------QLPVPAGLRSLC 633 (3956)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhh---------hcccccCccEEE
Confidence 99999999999999999999999999999999999999999999999999999874321 000000011111
Q ss_pred ecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC
Q 008848 314 LPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID 393 (551)
Q Consensus 314 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~ 393 (551)
+... .+...... ...+.....++++|||+|||||||+||||+++|+++.+.+.+....++
T Consensus 634 ~~~~---------------~~~~~~~~-----~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~ 693 (3956)
T PRK12467 634 LDEP---------------ADLLCGYS-----GHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQ 693 (3956)
T ss_pred eccc---------------cccccccC-----CCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcC
Confidence 1110 00000000 011223456799999999999999999999999999999998888899
Q ss_pred CCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCC--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCC
Q 008848 394 LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT 471 (551)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~ 471 (551)
++++|++++++|++|+.+++++|.+|+.|+++++++.. .++..+++.|++++||++.++|++++.|.+... .....
T Consensus 694 ~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~ 771 (3956)
T PRK12467 694 LAADDSMLMVSTFAFDLGVTELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASR--VALPR 771 (3956)
T ss_pred CCCCCEEEEecCccHhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhc--cccCC
Confidence 99999999999999999999999999999999998743 578899999999999999999999999987532 22356
Q ss_pred CccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCC---CCcCccCCCCCCceEEEECCCCCccCC
Q 008848 472 KIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQP---QAFGAFSTATMTAGLVILDECGVPYVR 548 (551)
Q Consensus 472 sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~---~~~~~iG~p~~g~~v~IlD~~g~~vp~ 548 (551)
++|.+++|||++++++.+.|.+.+++++++|.||+||+++.++....... ....+||+|++|++++|+|++++++|+
T Consensus 772 ~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~ 851 (3956)
T PRK12467 772 PQRALVCGGEALQVDLLARVRALGPGARLINHYGPTETTVGVSTYELSDEERDFGNVPIGQPLANLGLYILDHYLNPVPV 851 (3956)
T ss_pred cccEEEEEeecCCHHHHHHHHHhCCCCEEEeCcCCChhhhheeeEecccccccCCCCcccCCcCCCEEEEECCCCCCCCC
Confidence 78999999999999999999888777899999999999876554332211 123689999999999999999999999
Q ss_pred CCC
Q 008848 549 TFS 551 (551)
Q Consensus 549 Gv~ 551 (551)
|+.
T Consensus 852 G~~ 854 (3956)
T PRK12467 852 GVV 854 (3956)
T ss_pred CCc
Confidence 963
No 5
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=7.3e-59 Score=596.31 Aligned_cols=493 Identities=17% Similarity=0.161 Sum_probs=390.0
Q ss_pred HHHhhCCCchHHHHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCC-------C
Q 008848 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-------P 83 (551)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~-------~ 83 (551)
+.++++++++++.+|.++|+++++...++ +||++||++ |++.+++.|..+++|+ ||+||++++..... .
T Consensus 340 n~lplr~~~~~~~tf~~~l~~v~~~~~~a~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~ 416 (5163)
T PRK12316 340 NTQVLRSVFDGRTRVATLLAGVKDTVLGAQAHQDLPFER-LVEALKVERSLSHSPL--FQVMYNHQPLVADIEALDTVAG 416 (5163)
T ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHHhCCCCCCCCCCc--EEEEEEeecccccccccccCCC
Confidence 34688999999999999999999998888 999999999 9999999999999999 99999998632111 1
Q ss_pred c--cccCCcchhccccHHHHHHHhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeecccccc--ccCC
Q 008848 84 L--YWFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRT 158 (551)
Q Consensus 84 ~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~ 158 (551)
. ...+......++||.+.+.+.++++.+.+ |+. ++|+..+++++.++|.++++++..+++.+...+ +...
T Consensus 417 ~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~~ 491 (5163)
T PRK12316 417 LEFGQLEWKSRTTQFDLTLDTYEKGGRLHAALTYAT-----DLFEARTVERMARHWQNLLRGMVENPQARVDELPMLDAE 491 (5163)
T ss_pred ceEEeeccCCCccceeEEEEEEEcCCcEEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhccccccccCCCCCHH
Confidence 1 11122234567899888888888899998 999 999999999999999999999876555554433 2222
Q ss_pred CCCCCCCCcCCCCcchhhhhhccc--cccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCE
Q 008848 159 DKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDA 235 (551)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~ 235 (551)
+.......|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|+.|++. +++|++
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~A~~~~~~--------~~TY~eL~~~~~~lA~~L~~~gv~~g~~ 563 (5163)
T PRK12316 492 ERGQLVEGWNATAAEYPLQRGVHRLFEEQVERTPEAPALAFGEE--------TLDYAELNRRANRLAHALIERGVGPDVL 563 (5163)
T ss_pred HHHHHHHHhcCccccCCCCCCHHHHHHHHHHHCCCCeEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 211122345433211110112211 235689999999998776 999999999999999999999 999999
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEec
Q 008848 236 IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLP 315 (551)
Q Consensus 236 V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~ 315 (551)
|+|+++|++++++++|||+|+|++|+|+||.+|.+++.+++++++++++|++...... +........+.+.
T Consensus 564 V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~ 634 (5163)
T PRK12316 564 VGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRK---------LPLAAGVQVLDLD 634 (5163)
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhh---------CCcccCceEEEec
Confidence 9999999999999999999999999999999999999999999999999998753210 0000011111111
Q ss_pred CCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCC
Q 008848 316 AIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK 395 (551)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~ 395 (551)
.. ........ .........++++|||+|||||||+||||+++|+++++.+.+....++++
T Consensus 635 ~~---------------~~~~~~~~-----~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~ 694 (5163)
T PRK12316 635 RP---------------AAWLEGYS-----EENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLG 694 (5163)
T ss_pred Cc---------------chhhccCC-----CCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCC
Confidence 00 00011110 01122344678999999999999999999999999999999988899999
Q ss_pred CCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC--CCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCc
Q 008848 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (551)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~--~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sL 473 (551)
++|++++.+|++|+++++++|.+|+.|+++++++. ..++..+++.|++++||++.++|++++.|.+... ..++++|
T Consensus 695 ~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l 772 (5163)
T PRK12316 695 VGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSL 772 (5163)
T ss_pred CCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCc
Confidence 99999999999999999999999999999999863 3578899999999999999999999999986532 3357899
Q ss_pred cEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCc-CCCCCcCccCCCCCCceEEEECCCCCccCCCCC
Q 008848 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYVRTFS 551 (551)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv~ 551 (551)
|.+++|||++++++.+++.+.+++++++|.||+||+++.++.... .......+||+|++|++++|+|++|+++|+|+.
T Consensus 773 ~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~ 851 (5163)
T PRK12316 773 RRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVL 851 (5163)
T ss_pred cEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCc
Confidence 999999999999999999888877899999999999865433222 223345789999999999999999999999963
No 6
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.4e-58 Score=593.76 Aligned_cols=485 Identities=17% Similarity=0.183 Sum_probs=387.2
Q ss_pred HHHhhCCCchHHHHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCCC----cc-
Q 008848 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP----LY- 85 (551)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~~----~~- 85 (551)
+.+|++++++.+.+|.++|+++++...++ +||++||++ |++.+++.|+.+++|+ ||+||++++...... ..
T Consensus 2889 ntlPlrv~l~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~ 2965 (5163)
T PRK12316 2889 NTQVLRAQVDAQLAFRDLLGQVKEQALGAQAHQDLPFEQ-LVEALQPERSLSHSPL--FQVMYNHQSGERAAAQLPGLHI 2965 (5163)
T ss_pred cceeEEEecCCCCCHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHhccccccCCCCc--eeEEEeeeccccccccCCCcee
Confidence 45788999999999999999999998888 999999999 9999999999999999 999999987543221 11
Q ss_pred -ccCCcchhccccHHHHHHHhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeecccccc--ccCCCCC
Q 008848 86 -WFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKS 161 (551)
Q Consensus 86 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~ 161 (551)
.........++||.+.+.+.++++.+.+ |+. ++|++.+++++.++|.++++++...++.+...+ +...+..
T Consensus 2966 ~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~f~~lL~~l~~~p~~~i~~l~~~~~~~~~ 3040 (5163)
T PRK12316 2966 ESFAWDGAATQFDLALDTWESAEGLGASLTYAT-----DLFDARTVERLARHWQNLLRGMVENPQRSVDELAMLDAEERG 3040 (5163)
T ss_pred EeeeccCCccceeeEEEEEecCCcEEEEEEECc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCchhhccCCCHHHHH
Confidence 1111234578899888887788888888 999 999999999999999999999875554443332 2221111
Q ss_pred CCCCCcCCCCcchhhhhhccc--cccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEE
Q 008848 162 KHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAI 238 (551)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i 238 (551)
.....|+..........+++. ..+++++|+++|+.+.++ .+||+||+++++++|++|++. +++|++|+|
T Consensus 3041 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~gv~~~~~V~l 3112 (5163)
T PRK12316 3041 QLLEAWNATAAEYPLERGVHRLFEEQVERTPDAVALAFGEQ--------RLSYAELNRRANRLAHRLIERGVGPDVLVGV 3112 (5163)
T ss_pred HHHHHhCCCCcCCCCcCCHHHHHHHHHHhCCCCeeEeeCCe--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 223356644332222222222 346689999999999877 999999999999999999999 999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCC
Q 008848 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG 318 (551)
Q Consensus 239 ~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~ 318 (551)
+++|++++++++|||+|+|++|||+||.+|.+|+.++++++++++++++.... .+ ......++.+....
T Consensus 3113 ~~~~s~~~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~-----~~------~~~~~~~~~~~~~~ 3181 (5163)
T PRK12316 3113 AVERSLEMVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHLR-----LP------LAQGVQVLDLDRGD 3181 (5163)
T ss_pred EccCCHHHHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCcccc-----CC------ccCCccEEEecccc
Confidence 99999999999999999999999999999999999999999999999986420 00 00011122221100
Q ss_pred CCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCC
Q 008848 319 NDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGD 398 (551)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d 398 (551)
... ....+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|
T Consensus 3182 ------------------~~~-----~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d 3238 (5163)
T PRK12316 3182 ------------------ENY-----AEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVGD 3238 (5163)
T ss_pred ------------------ccc-----cccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhhCCCccc
Confidence 000 001122345678999999999999999999999999999999888889999999
Q ss_pred EEEEecCcccchhhHHHHHHHHhCCEEEEecCC--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEE
Q 008848 399 VYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSF 476 (551)
Q Consensus 399 ~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i 476 (551)
+++++++++||.+++++|.+|+.|+++++.+.. .++..+.+.++++++|++.++|+++..+.+.. ....+++||.+
T Consensus 3239 ~~l~~~~~~fd~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~--~~~~~~~lr~~ 3316 (5163)
T PRK12316 3239 RVLQFTTFSFDVFVEELFWPLMSGARVVLAGPEDWRDPALLVELINSEGVDVLHAYPSMLQAFLEEE--DAHRCTSLKRI 3316 (5163)
T ss_pred EEEeecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCcEEEcCHHHHHHHHhcc--ccccCCcceEE
Confidence 999999999999999999999999999997632 36788999999999999999999999987643 22346899999
Q ss_pred EeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCCC
Q 008848 477 ASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTFS 551 (551)
Q Consensus 477 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv~ 551 (551)
++|||++++++.++|.. +.+++|.|||||+++.++..... .....++||+|++|++++|+|++|+++|+|+.
T Consensus 3317 ~~gGe~l~~~~~~~~~~---~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~ 3389 (5163)
T PRK12316 3317 VCGGEALPADLQQQVFA---GLPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYILDGSLEPVPVGAL 3389 (5163)
T ss_pred EEccccCCHHHHHHHHh---CCcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEEECCCCCCCCCCCC
Confidence 99999999999998872 36899999999999866543332 22345799999999999999999999999973
No 7
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=2.6e-58 Score=545.53 Aligned_cols=485 Identities=16% Similarity=0.129 Sum_probs=370.6
Q ss_pred HHHhhCCCchHHHHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCCCc---ccc
Q 008848 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPL---YWF 87 (551)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~~~---~~~ 87 (551)
+.+|++++.+.+.+|.++++++++...++ +||++||++ |++.++ +..+.+|+ ||++|++++....... ...
T Consensus 295 ntlplr~~~~~~~tf~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~--~~~~~~~l--f~~~~~~~~~~~~~~~~~~~~~ 369 (1296)
T PRK10252 295 NVLPLRVHIAAQETLPELATRLAAQLKKMRRHQRYDAEQ-IVRDSG--RAAGDEPL--FGPVLNIKVFDYQLDFPGVQAQ 369 (1296)
T ss_pred ceEEEEEecCCCCCHHHHHHHHHHHHHHHHhhcCCCHHH-HHHHhc--CccCCCCc--eeEEEEeeecccccCcCCccce
Confidence 46788899889999999999999998888 999999999 999985 45567788 9999998765421111 000
Q ss_pred -CCcchhccccHHHHHH-HhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeecccccc--ccCCCCCC
Q 008848 88 -PSLDQSKLTNLGNALE-IHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSK 162 (551)
Q Consensus 88 -~~~~~~~~~~l~~~~~-~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~ 162 (551)
........+|+.+.+. ..++++.+.+ |+. ++|++.+++++.++|..+++++...+..+...+ +...+...
T Consensus 370 ~~~~~~~~~~dl~l~~~~~~~~~l~~~~~y~~-----~~f~~~~i~~l~~~~~~ll~~~~~~p~~~i~~~~~~~~~~~~~ 444 (1296)
T PRK10252 370 THTLATGPVNDLELALFPDEHGGLSIEILANP-----QRYDEATLIAHAERLKALIAQFAADPALLCGDVDILLPGEYAQ 444 (1296)
T ss_pred eeecCCCccCCeEEEEEECCCCcEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHHhCCCCChhhcCCCCHHHHHH
Confidence 0001112346666654 3346677888 998 999999999999999999999875544443322 11111111
Q ss_pred CCCCcCCCCcchh---hhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEE
Q 008848 163 HGGTWLPGSVLNI---AECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAI 238 (551)
Q Consensus 163 ~~~~~~~~~~~~~---~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i 238 (551)
...|+....... ....+ ..+++++||++|+++.+. .+||+||+++++++|+.|.+. +++||+|+|
T Consensus 445 -~~~~~~~~~~~~~~~l~~~~--~~~~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l 513 (1296)
T PRK10252 445 -LAQVNATAVEIPETTLSALV--AQQAAKTPDAPALADARY--------QFSYREMREQVVALANLLRERGVKPGDSVAV 513 (1296)
T ss_pred -HHHhcCCCCCCCcCCHHHHH--HHHHHhCCCCeEEEcCCC--------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 223332221111 11122 235578999999998776 899999999999999999999 999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCC
Q 008848 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG 318 (551)
Q Consensus 239 ~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~ 318 (551)
+++|++++++++|||+++|++|+|+||.+|.+++.++++++++++++++...... +.. .. ...++.
T Consensus 514 ~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~---------~~~-~~-~~~~~~--- 579 (1296)
T PRK10252 514 ALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPR---------FAD-VP-DLTSLC--- 579 (1296)
T ss_pred EeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhh---------ccc-CC-Cceeee---
Confidence 9999999999999999999999999999999999999999999999998753211 000 00 000110
Q ss_pred CCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCC
Q 008848 319 NDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGD 398 (551)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d 398 (551)
+........ ........++++|||+|||||||+||||+++|+++++.+.+....++++++|
T Consensus 580 -------------~~~~~~~~~------~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d 640 (1296)
T PRK10252 580 -------------YNAPLAPQG------AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADD 640 (1296)
T ss_pred -------------ccccccccc------CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCC
Confidence 000000000 0011123568999999999999999999999999999999998899999999
Q ss_pred EEEEecCcccchhhHHHHHHHHhCCEEEEecC--CCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccC--CCCCCCcc
Q 008848 399 VYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIR 474 (551)
Q Consensus 399 ~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~--~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~sLr 474 (551)
++++.+|++|+.+++++|.+|+.|+++++.+. ..++..+++.|++++||++.++|++++.+++..... ...++++|
T Consensus 641 ~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr 720 (1296)
T PRK10252 641 VVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLR 720 (1296)
T ss_pred EEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCcc
Confidence 99999999999999999999999999999763 347889999999999999999999999988653222 12468999
Q ss_pred EEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCC------CCCcCccCCCCCCceEEEECCCCCccCC
Q 008848 475 SFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQAFGAFSTATMTAGLVILDECGVPYVR 548 (551)
Q Consensus 475 ~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~------~~~~~~iG~p~~g~~v~IlD~~g~~vp~ 548 (551)
.+++|||++++++.+.+.+.++ ++++|.||+||+++.++...... .....+||+|++|++++|+|++++++|+
T Consensus 721 ~i~~gGe~l~~~~~~~~~~~~~-~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~ 799 (1296)
T PRK10252 721 QVFCSGEALPADLCREWQQLTG-APLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPP 799 (1296)
T ss_pred EEEEecCCCCHHHHHHHHhcCC-CEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCC
Confidence 9999999999999998887654 78999999999987554432211 2345689999999999999999999999
Q ss_pred CCC
Q 008848 549 TFS 551 (551)
Q Consensus 549 Gv~ 551 (551)
|+.
T Consensus 800 g~~ 802 (1296)
T PRK10252 800 GVA 802 (1296)
T ss_pred CCc
Confidence 973
No 8
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-55 Score=482.25 Aligned_cols=426 Identities=19% Similarity=0.231 Sum_probs=329.8
Q ss_pred ccchHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCCCCCCCCcCCCCcchhhhhhccccccCCCCCCceEEEE
Q 008848 118 ITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVW 197 (551)
Q Consensus 118 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~ 197 (551)
+.+|+.++++++++++.||..+++.+ ++|.+++.++++. .....+||.++.+|.++++++++.....+||++|+++
T Consensus 7 ~~~y~~~~~~s~~~~~~fw~~~~~~~-~~~~~~~~~~~~~---~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~ 82 (647)
T PTZ00237 7 PFDYENDSNYANSNPESFWDEVAKKY-VHWDKMYDKVYSG---DEIYPDWFKGGELNTCYNVLDIHVKNPLKRDQDALIY 82 (647)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHhc-CeeeCCcccccCC---CCCchhhCCCCeeeHHHHHHHHhhcccCCCCceEEEE
Confidence 35689999999999999999999997 6999999999864 2233799999999999999987642123799999998
Q ss_pred ecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHH
Q 008848 198 REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRL 276 (551)
Q Consensus 198 ~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l 276 (551)
.... .+..+++||+||+++++++|+.|+++ |++||+|+|+++|++|+++++|||+++||+++|+++.++.+++.++|
T Consensus 83 ~~~~--~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l 160 (647)
T PTZ00237 83 ECPY--LKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRI 160 (647)
T ss_pred EcCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHH
Confidence 6431 12346899999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCceEEEeecceeccCccccchhHHhhcC------CCceEEecCCCCC--C------CCCCCCCCcchHHhhccCCCC
Q 008848 277 RVSKAKGIFTQDFILRGGRKFPLYSKVLGAA------PLKAIVLPAIGND--V------GIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 277 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~------~~~~~vv~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~ 342 (551)
++++++++|+++...+.++.++....+.+.. ..+++++...... . .....+....|++++......
T Consensus 161 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (647)
T PTZ00237 161 ETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKEN 240 (647)
T ss_pred HhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccc
Confidence 9999999999886655555444443332221 1233333221100 0 000111234566665432110
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchh-hHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHh
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (551)
............++|++||+|||||||+||||+++|++ +++........+....++++++.++++|+++...++.+|+.
T Consensus 241 ~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~ 320 (647)
T PTZ00237 241 NQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLYGSLSL 320 (647)
T ss_pred cCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHHHHHHHhC
Confidence 00111122345678999999999999999999999998 44433333445667788999999999999877778899999
Q ss_pred CCEEEEecCCC-C----hhhHHHHHHHcCCcEEEecHHHHHHHHhcCc-----cCCCCCCCccEEEeecCCCChhhHHHH
Q 008848 422 GATLALYQGSP-L----ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----LEGLDWTKIRSFASTGETSNVDDDLWL 491 (551)
Q Consensus 422 G~~lvl~~~~~-~----~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~-----~~~~~l~sLr~i~~gGe~l~~~~~~~~ 491 (551)
|++++++++.+ . +..+++.|++++||++.++|++++.|++... ....++++||.+++|||++++++.+++
T Consensus 321 G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~ 400 (647)
T PTZ00237 321 GNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYI 400 (647)
T ss_pred CcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHH
Confidence 99999987532 2 5679999999999999999999999987532 234578999999999999999999999
Q ss_pred HHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
++.++ ++++|.||+||++++++..........+++|+|++|++++|+|++|+++|+|.
T Consensus 401 ~~~~g-~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge 458 (647)
T PTZ00237 401 ENKLK-IKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVNE 458 (647)
T ss_pred HHhcC-CCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCCC
Confidence 88876 89999999999986544332222233478999999999999999999998874
No 9
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.1e-57 Score=581.62 Aligned_cols=490 Identities=14% Similarity=0.110 Sum_probs=378.6
Q ss_pred HHHhhCCCchHH---HHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCCCc---
Q 008848 12 DLMKVGLKLEEA---EEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPL--- 84 (551)
Q Consensus 12 ~~~~~~~~~~~~---~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~~~--- 84 (551)
+.+++|++.+++ .++.++|+++++...++ +||++||++ |++..+.. +..+| ||++|+++|.+.....
T Consensus 3551 Ntlp~Rv~~~~~~~~~t~~~~L~~v~~~~~~~~~~q~~~l~~-i~~~~~~~---~~~~L--F~t~~v~~n~~~~~~~~~~ 3624 (4334)
T PRK05691 3551 NSIALRVQLPAAGQRCSVRQWLQGLLDSNMELREYEYLPLVA-IQECSELP---KGQPL--FDSLFVFENAPVEVSVLDR 3624 (4334)
T ss_pred cccceEEeeCCccCCCcHHHHHHHHHHHHHHHhhccCCCHHH-HHHHhcCC---CCCCC--ccEEEEeecCCcchhhhcc
Confidence 346788888654 59999999999998887 999999999 99877543 33578 9999999987532210
Q ss_pred ---cc--cCCcchhccccHHHHHHHhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeecccccc--cc
Q 008848 85 ---YW--FPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LD 156 (551)
Q Consensus 85 ---~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--l~ 156 (551)
.. ........+|+|++.+.. ++.+.+.+ |++ +.|++.+++++.++|.++++++...+..+...+ +.
T Consensus 3625 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~l~~~l~y~~-----~~~~~~~~~~l~~~f~~~L~~l~~~~~~~~~~~~~~~ 3698 (4334)
T PRK05691 3625 AQSLNASSDSGRTHTNFPLTAVCYP-GDDLGLHLSYDQ-----RYFDAPTVERLLGEFKRLLLALVQGFHGDLSELPLLG 3698 (4334)
T ss_pred cccccccccccccccCCCeEEEEec-CCceEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhCcCCChhhcCCCC
Confidence 00 011123456666664433 45677778 998 999999999999999999999875555444333 22
Q ss_pred CCCCCCCCCCcCCCCcchhhhhhccc--cccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCC
Q 008848 157 RTDKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKG 233 (551)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~g 233 (551)
..+.......|+..........+++. ..+++++||++|+++.+. .+||+||+++++++|++|++. |++|
T Consensus 3699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~~tY~eL~~~~~~la~~L~~~gv~~~ 3770 (4334)
T PRK05691 3699 EQERDFLLDGCNRSERDYPLEQSYVRLFEAQVAAHPQRIAASCLDQ--------QWSYAELNRAANRLGHALRAAGVGVD 3770 (4334)
T ss_pred HHHHHHHHHhhCCccCCCccccCHHHHHHHHHHhCCCceEEEcCCC--------cccHHHHHHHHHHHHHHHHHcCCCCC
Confidence 22222223456554333323333332 346799999999999887 999999999999999999999 9999
Q ss_pred CEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC---Cc
Q 008848 234 DAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---LK 310 (551)
Q Consensus 234 d~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~---~~ 310 (551)
++|+|++++|+++++++|||+|+|++||||||.+|.+|+.+|+++++++++|+++.... ....+..... ..
T Consensus 3771 ~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~ 3844 (4334)
T PRK05691 3771 QPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACRE------QARALLDELGCANRP 3844 (4334)
T ss_pred CEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccc------hhhhhhccccccccc
Confidence 99999999999999999999999999999999999999999999999999999886421 1111111110 00
Q ss_pred eEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh
Q 008848 311 AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA 390 (551)
Q Consensus 311 ~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~ 390 (551)
.+++ +++...... ....+.....++++|||+|||||||+||||+++|+++++.+.+...
T Consensus 3845 ~~~~-----------------~~~~~~~~~----~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~ 3903 (4334)
T PRK05691 3845 RLLV-----------------WEEVQAGEV----ASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVP 3903 (4334)
T ss_pred ceee-----------------ecccccccc----cccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHH
Confidence 1111 011100000 0111223456799999999999999999999999999999998888
Q ss_pred hcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCC--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCC
Q 008848 391 HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 468 (551)
Q Consensus 391 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~ 468 (551)
.++++++|+++++++++||.+++++|.+|+.|+++++++.. .++..+++.|++++||++.++|++++.+++.. ..
T Consensus 3904 ~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~ 3980 (4334)
T PRK05691 3904 YLALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQ 3980 (4334)
T ss_pred hcCCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cc
Confidence 89999999999999999999999999999999999998743 36789999999999999999999999987643 23
Q ss_pred CCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcC---CCCCcCccCCCCCCceEEEECCCCCc
Q 008848 469 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDECGVP 545 (551)
Q Consensus 469 ~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~g~~v~IlD~~g~~ 545 (551)
.+++||.+++|||++++++.+.|.+.+++++++|.||||||++.++..... ......+||+|++|++++|+|+++++
T Consensus 3981 ~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~ 4060 (4334)
T PRK05691 3981 ALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALEL 4060 (4334)
T ss_pred cCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCCC
Confidence 478999999999999999999998888888999999999999765443221 12234689999999999999999999
Q ss_pred cCCCCC
Q 008848 546 YVRTFS 551 (551)
Q Consensus 546 vp~Gv~ 551 (551)
+|.|+.
T Consensus 4061 ~p~g~~ 4066 (4334)
T PRK05691 4061 VPLGAV 4066 (4334)
T ss_pred CCCCCc
Confidence 999974
No 10
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.2e-57 Score=581.39 Aligned_cols=493 Identities=13% Similarity=0.091 Sum_probs=383.6
Q ss_pred HHHhhCCCchHHHHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCC-----Cc-
Q 008848 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-----PL- 84 (551)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~-----~~- 84 (551)
+.+|++++++.+.+|.+++++++++..++ +||++||++ |++.+++.|..+++|+ ||+||++++..... ..
T Consensus 2019 ntlPlrv~~~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~ 2095 (4334)
T PRK05691 2019 NTQVLRCQLDGQMSVSELLEQVRQTVIEGQSHQDLPFDH-LVEALQPPRSAAYNPL--FQVMCNVQRWEFQQSRQLAGMT 2095 (4334)
T ss_pred eeeeEEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccccCCCCc--eEEEEEeeccccccccCCCCce
Confidence 45788999999999999999999998888 999999999 9999999999999999 99999998643211 11
Q ss_pred -cccCCcchhccccHHHHHHHhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeecccccc--ccCCCC
Q 008848 85 -YWFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDK 160 (551)
Q Consensus 85 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~ 160 (551)
..........+|||.+.+.+.++++.+.+ |+. ++|++.+++++.++|.++++++...++.+...+ +...+.
T Consensus 2096 ~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 2170 (4334)
T PRK05691 2096 VEYLVNDARATKFDLNLEVTDLDGRLGCCLTYSR-----DLFDEPRIARMAEHWQNLLEALLGDPQQRLAELPLLAAAEQ 2170 (4334)
T ss_pred eEeecccCCccccceEEEEEecCCcEEEEEEECc-----ccCCHHHHHHHHHHHHHHHHHHHhhhcCChhhccCCcHHHH
Confidence 11112234578898888877778888888 998 999999999999999999999875554443222 222111
Q ss_pred CCCCCCcCCCCcchhhhhhccc--cccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEE
Q 008848 161 SKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237 (551)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~ 237 (551)
......|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|++|++. +++|++|+
T Consensus 2171 ~~l~~~~~~~~~~~~~~~~l~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~Gv~~g~~V~ 2242 (4334)
T PRK05691 2171 QQLLDSLAGEAGEARLDQTLHGLFAAQAARTPQAPALTFAGQ--------TLSYAELDARANRLARALRERGVGPQVRVG 2242 (4334)
T ss_pred HHHHHHhCCCCcCCCcccchHHHHHHHHHHCCCCeEEEeCCe--------EEcHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 1111223322211111222222 235689999999998776 999999999999999999999 99999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc--eEEec
Q 008848 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLP 315 (551)
Q Consensus 238 i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~vv~ 315 (551)
++++|++++++++|||+|+|++|||+||.+|.+|+.+++++++++++|++..... .+. ..... .+.+.
T Consensus 2243 l~~~~s~~~vv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~---------~~~-~~~~~~~~~~~~ 2312 (4334)
T PRK05691 2243 LALERSLEMVVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFE---------ALG-ELPAGVARWCLE 2312 (4334)
T ss_pred EEeCCCHHHHHHHHHHHHhCcEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhh---------hhc-cccccceeEEec
Confidence 9999999999999999999999999999999999999999999999999875321 110 00000 11111
Q ss_pred CCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCC
Q 008848 316 AIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK 395 (551)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~ 395 (551)
.. ...+ ..... ........++++|||+|||||||+||||+++|+++.+.+.+....++++
T Consensus 2313 ~~--------------~~~~-~~~~~-----~~~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~~ 2372 (4334)
T PRK05691 2313 DD--------------AAAL-AAYSD-----APLPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGMR 2372 (4334)
T ss_pred cc--------------hhhh-hcCCC-----CCCCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCC
Confidence 00 0000 00000 0111223468999999999999999999999999999988888889999
Q ss_pred CCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC-CCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCcc
Q 008848 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIR 474 (551)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~-~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr 474 (551)
++|+++++++++|+.+++++|.+|+.|+++++.+. ..++..+++.|++++||++.++|++++.|.+.... .....++|
T Consensus 2373 ~~d~~l~~~~~~fd~~~~~i~~~L~~G~~lvl~~~~~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~~~~-~~~~~~lr 2451 (4334)
T PRK05691 2373 ADDCELHFYSINFDAASERLLVPLLCGARVVLRAQGQWGAEEICQLIREQQVSILGFTPSYGSQLAQWLAG-QGEQLPVR 2451 (4334)
T ss_pred cccEEEEecCccHHHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHhhhc-cccCCCce
Confidence 99999999999999999999999999999999763 34788999999999999999999999999765322 23456899
Q ss_pred EEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcC----CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 475 SFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 475 ~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
.+++|||++++++.+++...++...++|.||+||++++.+.+... ......+||+|++|+.++|+|++++++|+|+
T Consensus 2452 ~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~pi~~~~~~i~d~~~~~vp~G~ 2531 (4334)
T PRK05691 2452 MCITGGEALTGEHLQRIRQAFAPQLFFNAYGPTETVVMPLACLAPEQLEEGAASVPIGRVVGARVAYILDADLALVPQGA 2531 (4334)
T ss_pred EEEEccccCCHHHHHHHHHhCCCceEEeCcCCCcceEEEEEeecccccccCCCCCccccccCCCEEEEECCCCCCCCCCC
Confidence 999999999999999998888767899999999998654332211 1122357999999999999999999999996
Q ss_pred C
Q 008848 551 S 551 (551)
Q Consensus 551 ~ 551 (551)
.
T Consensus 2532 ~ 2532 (4334)
T PRK05691 2532 T 2532 (4334)
T ss_pred c
Confidence 3
No 11
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=7.5e-57 Score=535.16 Aligned_cols=510 Identities=15% Similarity=0.101 Sum_probs=375.0
Q ss_pred HHHhhCCCchHHHHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhH-HHHHHhhcccccCCCCCCccccCC
Q 008848 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQ-LVYYSVYNDWDASIKGPPLYWFPS 89 (551)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~-l~~fq~~~~~~~~~~~~~~~~~~~ 89 (551)
+.++++++++.+.+|.++|++++++..++ +||++||++ |++.+++.|..+++| + ||++|..+..... . .
T Consensus 80 ~~lplr~~~~~~~t~~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~~~~~~p~l--f~~~~~~~~~~~~--~----~ 150 (1389)
T TIGR03443 80 RPFVLRLNITPELSFLQLYAKVSEEEKEGASDIGVPFDE-LSEHIQAAKKLERTPPL--FRLAFQDAPDNQQ--T----T 150 (1389)
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccCCCCCCcc--EEEEeecCCcccc--c----c
Confidence 56789999999999999999999998888 999999999 999999999888887 6 9977754332111 0 1
Q ss_pred cchhccccHHHHHHHhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeecccccc--ccCCCCCCC---
Q 008848 90 LDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKH--- 163 (551)
Q Consensus 90 ~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~--- 163 (551)
.....++||.+.+.+.++++.+.+ |+. ++|++.+++++.++|..+++++...++.+...+ +...+....
T Consensus 151 ~~~~~~~dl~~~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~f~~lL~~~~~~p~~~l~~l~~~~~~~~~~~~~~ 225 (1389)
T TIGR03443 151 YSTGSTTDLTVFLTPSSPELELSIYYNS-----LLFSSDRITIVADQLAQLLSAASSNPDEPIGKVSLITPSQKSLLPDP 225 (1389)
T ss_pred cccCCccceEEEEEecCCcEEEEEEEch-----hcCCHHHHHHHHHHHHHHHHHHHhCcCCceecccCCCHHHHhhhhcc
Confidence 134567888888877788888888 998 999999999999999999999875555554332 221111100
Q ss_pred --CCCcCCCCcchhhhhhccccccCCCCCCceEEEEecCC-CCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 008848 164 --GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (551)
Q Consensus 164 --~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~-~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~ 239 (551)
...|... .......+. .+++++||++|+++.... +.....+++||+||+++++++|++|++. +++||+|+|+
T Consensus 226 ~~~~~~~~~--~~~l~~~~~--~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~ 301 (1389)
T TIGR03443 226 TKDLDWSGF--RGAIHDIFA--DNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIY 301 (1389)
T ss_pred ccccCcCcc--cCcHHHHHH--HHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 0123210 011122232 245889999999864210 0012345899999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhc-C---C-CceEEe
Q 008848 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-A---P-LKAIVL 314 (551)
Q Consensus 240 ~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~vv 314 (551)
++|++++++++|||+|+|++++|+||.+|.+++.++++++++++++++.... ............ . . ...+.+
T Consensus 302 ~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (1389)
T TIGR03443 302 AYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAG---TLDQLVRDYIDKELELRTEIPALAL 378 (1389)
T ss_pred ecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEecccc---ccchhhhhhhhcccccccccceEEe
Confidence 9999999999999999999999999999999999999999999999876421 000111111000 0 0 000111
Q ss_pred cCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCC
Q 008848 315 PAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL 394 (551)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~ 394 (551)
........ ........+....... ...........++++|||+|||||||.||||+++|+++.+.+.+....+++
T Consensus 379 ~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~ 453 (1389)
T TIGR03443 379 QDDGSLVG---GSLEGGETDVLAPYQA--LKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGL 453 (1389)
T ss_pred cccccccc---cccccccccccccccc--cccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCC
Confidence 10000000 0000000011100000 000011123457899999999999999999999999999998888888999
Q ss_pred CCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCC--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCC
Q 008848 395 KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (551)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~s 472 (551)
.++|++++.++++|+.+++++|.+|+.|+++++.+.. .++..+++.|++++||++.++|++++.|.... ...+++
T Consensus 454 ~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~ 530 (1389)
T TIGR03443 454 SENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPS 530 (1389)
T ss_pred CCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCC
Confidence 9999999999999999999999999999999997642 25778999999999999999999999987542 234789
Q ss_pred ccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCC----------CCCcCccCCCCCCceEEEECCC
Q 008848 473 IRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDEC 542 (551)
Q Consensus 473 Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~g~~v~IlD~~ 542 (551)
||.+++|||++++...+++....++++++|.||+||++++++...... .....++|+|++|++++|+|++
T Consensus 531 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~ 610 (1389)
T TIGR03443 531 LHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRN 610 (1389)
T ss_pred ccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCc
Confidence 999999999999999888887777789999999999986544322110 1134689999999999999965
Q ss_pred --CCccCCCC
Q 008848 543 --GVPYVRTF 550 (551)
Q Consensus 543 --g~~vp~Gv 550 (551)
++++|+|.
T Consensus 611 ~~~~~~~~G~ 620 (1389)
T TIGR03443 611 DRTQTCGVGE 620 (1389)
T ss_pred cCCCcCCCCC
Confidence 57899886
No 12
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.8e-54 Score=472.41 Aligned_cols=417 Identities=22% Similarity=0.367 Sum_probs=331.0
Q ss_pred chHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCCCCCCCCcCCCCcchhhhhhccccccCCCCCCceEEEEec
Q 008848 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWRE 199 (551)
Q Consensus 120 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~ 199 (551)
+|+.+++++++++..||..+++. +.|.+++.++++.. ..+..+||.++.+|.++++++++. +.+|+++|+++.+
T Consensus 2 ~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~~~ 75 (628)
T TIGR02316 2 RYEEFYQRSIEQPEAFWAEQARR--IDWQTPPQRILDYS--NPPFARWFAGGRTNLCHNALDRHL--DERGEQLALVTVS 75 (628)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHh--CCeecCCcccccCC--CCCcCccCCCCEeeHHHHHHHHHh--CcCCCCeEEEEEc
Confidence 47889999999999999999998 57999999987542 234679999999999999998754 6789999999854
Q ss_pred CCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHh
Q 008848 200 DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRV 278 (551)
Q Consensus 200 ~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~ 278 (551)
. ..+..+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++
T Consensus 76 ~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~ 153 (628)
T TIGR02316 76 S--ETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDD 153 (628)
T ss_pred C--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHh
Confidence 2 123456899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEeecceeccCccccchhHHhh---c---CCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCC
Q 008848 279 SKAKGIFTQDFILRGGRKFPLYSKVLG---A---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (551)
Q Consensus 279 ~~~~~vl~~~~~~~~~~~~~~~~~~~~---~---~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (551)
++++++|+++...+.++.++....+.+ . ....++++....... .........|+++...... ...+...
T Consensus 154 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~ 228 (628)
T TIGR02316 154 ATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM-RLIPGRDVDYAALRTQHED----AQVPVEW 228 (628)
T ss_pred cCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCccccHHHHhhcccc----CCCCcee
Confidence 999999999876666665554443322 1 122334443221110 0011123456665543211 1112223
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHH-HHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCEEEEecC
Q 008848 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (551)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~ 430 (551)
..+++++||+|||||||.||||+++|++++. ........++++++|++++.++++|+++. +.++.+|+.|++++++++
T Consensus 229 ~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~ 308 (628)
T TIGR02316 229 LESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEG 308 (628)
T ss_pred cCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCC
Confidence 4678999999999999999999999999753 34445556789999999999999999986 568899999999999875
Q ss_pred ---CCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecccc
Q 008848 431 ---SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (551)
Q Consensus 431 ---~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (551)
.+++..++++|++++||++.++|++++.|.+... ....++++||.+++|||++++++.++++..++ .+++|.||
T Consensus 309 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~-~~~~~~yG 387 (628)
T TIGR02316 309 LPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLG-KPVIDNYW 387 (628)
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHhC-CCEEeccc
Confidence 3467889999999999999999999999987542 23457899999999999999999999888775 78999999
Q ss_pred ccccccccccCCcC---CCCCcCccCCCCCCceEEEECC-CCCccCCCC
Q 008848 506 GTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDE-CGVPYVRTF 550 (551)
Q Consensus 506 ~TE~~~~~~~~~~~---~~~~~~~iG~p~~g~~v~IlD~-~g~~vp~Gv 550 (551)
+||++..++..... .+...+++|+|++|++++|+|+ +|+++|+|.
T Consensus 388 ~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~ 436 (628)
T TIGR02316 388 QTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNE 436 (628)
T ss_pred ccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCC
Confidence 99998543332221 2345678999999999999998 799999875
No 13
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3e-54 Score=474.83 Aligned_cols=422 Identities=23% Similarity=0.315 Sum_probs=327.7
Q ss_pred cchHHHHHHhhhChHHHHHHHHhhccceeeccc--cccccCCC---CCCCCCCcCCCCcchhhhhhccccccCCCCCCce
Q 008848 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAP--KCILDRTD---KSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (551)
Q Consensus 119 ~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~--~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~ 193 (551)
.+|+.++++++++++.||..+++.+ .|..++ .++++... ......+||.++.+|.++++++++. .+.+|+++
T Consensus 30 ~~y~~~~~~s~~~~~~fw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~wf~g~~~N~~~~~l~~~~-~~~~~~~~ 106 (666)
T PLN02654 30 QQYMEMYKRSVDDPAGFWSDIASQF--YWKQKWEGDEVCSENLDVRKGPISIEWFKGGKTNICYNCLDRNV-EAGNGDKI 106 (666)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhC--CeecCCCcceEeccCCCcccCCccccccCCCEeeHHHHHHHHhh-ccCCCCCE
Confidence 4679999999999999999999985 566665 35653211 1123569999999999999998754 13589999
Q ss_pred EEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHH
Q 008848 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (551)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l 272 (551)
|+++.+. ..+..+++||+||.++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++
T Consensus 107 Al~~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l 184 (666)
T PLN02654 107 AIYWEGN--EPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESL 184 (666)
T ss_pred EEEEEcC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHH
Confidence 9998543 123456899999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEeecceeccCccccchhHHhhcCC--------Cc-eEEecCCCC--CCCCCC-CCCCcchHHhhccCC
Q 008848 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--------LK-AIVLPAIGN--DVGIPL-REQDLSWKDFLSSVD 340 (551)
Q Consensus 273 ~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~vv~~~~~--~~~~~~-~~~~~~~~~~~~~~~ 340 (551)
.+++++++++++|+++.+.+.++.++....+..... .. ++....... ...... ......|+++.....
T Consensus 185 ~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (666)
T PLN02654 185 AQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYP 264 (666)
T ss_pred HHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCC
Confidence 999999999999999887766665554433322111 01 111111000 000000 011233555543221
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH-HHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHH
Q 008848 341 YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (551)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (551)
. ..+.....++|++||+|||||||+||||+++|++++. ........++++++|++++.++++|.++. +.++.+
T Consensus 265 ~-----~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 339 (666)
T PLN02654 265 T-----KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGP 339 (666)
T ss_pred C-----CCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHH
Confidence 1 1122335679999999999999999999999999764 33445556889999999999999999986 457899
Q ss_pred HHhCCEEEEecCC---CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHH
Q 008848 419 FLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (551)
Q Consensus 419 l~~G~~lvl~~~~---~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~ 493 (551)
|+.|++++++++. +++..++++|++++||++.++|++++.|.+... ....++++||.++++||+++++.++++.+
T Consensus 340 L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~ 419 (666)
T PLN02654 340 MLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFN 419 (666)
T ss_pred HHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHH
Confidence 9999999999753 468899999999999999999999999987643 23467899999999999999999999998
Q ss_pred hccC--CceeccccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 494 KAWY--NAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 494 ~~~~--~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
.++. +++.+.||+||+++..+...+. .+..++++|+|++|++++|+|++|+++|.|.
T Consensus 420 ~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~ 479 (666)
T PLN02654 420 VVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGEC 479 (666)
T ss_pred HhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCC
Confidence 8864 6899999999998654443321 2456789999999999999999999998764
No 14
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=4.9e-54 Score=471.90 Aligned_cols=420 Identities=26% Similarity=0.412 Sum_probs=334.7
Q ss_pred ccchHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCCCCCCCCcCCCCcchhhhhhccccccCCCCCCceEEEE
Q 008848 118 ITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVW 197 (551)
Q Consensus 118 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~ 197 (551)
+.+|+.++++++++++.||..+++. .+.|.+++.++++.. .....+||.++.+|.+++++++++ +++|+++|+++
T Consensus 4 ~~~y~~~~~~s~~~~~~fw~~~~~~-~~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~ 78 (625)
T TIGR02188 4 LEQYKELYEESIEDPDKFWAKLARE-LLDWFKPFTKVLDWS--FPPFYKWFVGGELNVSYNCVDRHL--EARPDKVAIIW 78 (625)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHh-cCceecCCceeecCC--CCCCCeeCCCCEEEHHHHHHHHhh--ccCCCCeEEEE
Confidence 3568999999999999999999988 467889998887643 234679999999999999998754 67999999998
Q ss_pred ecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHH
Q 008848 198 REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRL 276 (551)
Q Consensus 198 ~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l 276 (551)
.++ ..+..+++||+||+++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++
T Consensus 79 ~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l 156 (625)
T TIGR02188 79 EGD--EPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRI 156 (625)
T ss_pred EcC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHH
Confidence 653 124467899999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCceEEEeecceeccCccccchhHHhh---cCC---CceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCC
Q 008848 277 RVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP---LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP 350 (551)
Q Consensus 277 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~---~~~---~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (551)
++++++++|+++...+.++..+....+.+ ..+ ..++++........ ........|+++...... ....
T Consensus 157 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~ 230 (625)
T TIGR02188 157 NDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVP-WVEGRDVWWHDLMAKASA-----YCEP 230 (625)
T ss_pred HhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcC-ccccccccHHHHHhhcCC-----CCCc
Confidence 99999999999887666665544443322 222 12333322211100 001123446666543221 1223
Q ss_pred CCCCCCCeEEEEecCCCCCCCceEEecchhhHHHH-HHhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCEEEEe
Q 008848 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALY 428 (551)
Q Consensus 351 ~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~ 428 (551)
....+++++||+|||||||+||||+++|++++... ......++++++|++++.++++|..+. +.++.+|+.|++++++
T Consensus 231 ~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~ 310 (625)
T TIGR02188 231 EPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMF 310 (625)
T ss_pred eecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEE
Confidence 34567899999999999999999999999976543 334445788999999999999999886 5688999999999998
Q ss_pred cCC---CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHhcc--CCcee
Q 008848 429 QGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAII 501 (551)
Q Consensus 429 ~~~---~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~--~~~l~ 501 (551)
++. +++..+++.|++++||++.++|++++.|.+... ....++++||.+++|||++++++++++.+.++ +++++
T Consensus 311 ~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~ 390 (625)
T TIGR02188 311 EGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIV 390 (625)
T ss_pred CCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceE
Confidence 743 368899999999999999999999999987542 23456899999999999999999999988876 37899
Q ss_pred ccccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccC-CCC
Q 008848 502 ESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYV-RTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp-~Gv 550 (551)
|.||+||+++.++...+. .+.+++++|+|++|++++|+|++|+++| +|.
T Consensus 391 ~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~ 441 (625)
T TIGR02188 391 DTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGE 441 (625)
T ss_pred ecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCC
Confidence 999999998654433221 2456788999999999999999999998 663
No 15
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-53 Score=466.14 Aligned_cols=418 Identities=20% Similarity=0.312 Sum_probs=329.8
Q ss_pred cchHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCCCCCCCCcCCCCcchhhhhhccccccCCCCCCceEEEEe
Q 008848 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (551)
Q Consensus 119 ~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~ 198 (551)
.+|+.++++++++++.||..+++. +.|++++.++++.. ..+..+||.++.+|.++++++++. +.+|+++|+++.
T Consensus 2 ~~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~A~~~~ 75 (629)
T PRK10524 2 MSYSEFYQRSIDDPEAFWAEQARR--IDWQTPFTQVLDYS--NPPFARWFVGGRTNLCHNAVDRHL--AKRPEQLALIAV 75 (629)
T ss_pred hhHHHHHHHHhcCHHHHHHHHHHh--CCcccCchhhccCC--CCCcCccCCCcEeeHHHHHHHHhh--ccCCCCeEEEEE
Confidence 468999999999999999999996 57999999988542 234578999999999999998754 678999999985
Q ss_pred cCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 008848 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (551)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~ 277 (551)
+. ..+..+++||+||+++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 76 ~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~ 153 (629)
T PRK10524 76 ST--ETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARID 153 (629)
T ss_pred cC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHH
Confidence 42 123456899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEEeecceeccCccccchhHHhh---cC---CCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCC
Q 008848 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AA---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351 (551)
Q Consensus 278 ~~~~~~vl~~~~~~~~~~~~~~~~~~~~---~~---~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (551)
+++++++|+++...+.++.++....+.+ .. ...++++....... .........|.++...... ...+..
T Consensus 154 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~ 228 (629)
T PRK10524 154 DAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM-ARVAGRDVDYATLRAQHLG----ARVPVE 228 (629)
T ss_pred hcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCCcccHHHHHhcCCC----CCCCce
Confidence 9999999998876666665544433322 11 12333333211100 0011123456665433221 111122
Q ss_pred CCCCCCeEEEEecCCCCCCCceEEecchhhHHHH-HHhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCEEEEec
Q 008848 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (551)
Q Consensus 352 ~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~ 429 (551)
...+++++||+|||||||.||||+++|++++... ......++++++|++++.++++|+++. +.++.+|+.|+++++++
T Consensus 229 ~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 308 (629)
T PRK10524 229 WLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYE 308 (629)
T ss_pred eeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEEC
Confidence 3456899999999999999999999999975433 334445788999999999999999886 56889999999999987
Q ss_pred CC---CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccc
Q 008848 430 GS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (551)
Q Consensus 430 ~~---~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (551)
+. +++..++++|+++++|++.++|++++.|.+... ....++++||.+++|||++++++.+++.+.++ ++++|.|
T Consensus 309 g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~-~~v~~~Y 387 (629)
T PRK10524 309 GLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEALG-VPVIDNY 387 (629)
T ss_pred CCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhcC-CCeEecc
Confidence 53 467889999999999999999999999887542 23456899999999999999999999988775 7899999
Q ss_pred cccccccccccCCc---CCCCCcCccCCCCCCceEEEECC-CCCccCCCC
Q 008848 505 GGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDE-CGVPYVRTF 550 (551)
Q Consensus 505 G~TE~~~~~~~~~~---~~~~~~~~iG~p~~g~~v~IlD~-~g~~vp~Gv 550 (551)
|+||++..++.... ..+...+++|+|++|++++|+|+ +|+++|+|.
T Consensus 388 G~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~ 437 (629)
T PRK10524 388 WQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNE 437 (629)
T ss_pred ccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCC
Confidence 99999743322221 12345678999999999999998 999999885
No 16
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-53 Score=466.38 Aligned_cols=445 Identities=27% Similarity=0.405 Sum_probs=346.1
Q ss_pred ccccCCcchhccccHHHHHHHhCCccccccCCCCccchHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCCCCC
Q 008848 84 LYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKH 163 (551)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 163 (551)
..|.|+......++|..+....... |+..+.+|+.++++++++++.||..+++...+.|..++.++++.. ...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~--~~~ 76 (655)
T PRK03584 4 PLWTPSAERIAASRMTAFIRWLAAR-----RGLSFDDYAALWRWSVEDLEAFWQSVWDFFGVIGSTPYTVVLAGR--RMP 76 (655)
T ss_pred CCCCCChhhcccchHHHHHHHHHHH-----hCCChHhHHHHHHHHHhCHHHHHHHHHHhcCceecCCCcEeecCC--CCC
Confidence 3677766656677776654433211 333346789999999999999999999987778988888886542 234
Q ss_pred CCCcCCCCcchhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC
Q 008848 164 GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM 242 (551)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~ 242 (551)
..+||.++.+|++++++++ .+|+++|+++.+. .+..+++||+||+++++++|++|++. +++||+|+|+++|
T Consensus 77 ~~~wf~~~~~n~~~~~~~~-----~~~~~~Al~~~~~---~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n 148 (655)
T PRK03584 77 GARWFPGARLNYAENLLRH-----RRDDRPAIIFRGE---DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPN 148 (655)
T ss_pred CCeeCCCCEeeHHHHhhcc-----CCCCCeEEEEECC---CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence 5799999999999999862 4689999998754 24567899999999999999999999 9999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhh---cCCC--ceEEecCC
Q 008848 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAPL--KAIVLPAI 317 (551)
Q Consensus 243 ~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~---~~~~--~~~vv~~~ 317 (551)
++++++++|||+++|++++|++|.++.+++.+++++++++++|+++.+.+.++.++....+.+ ..+. .++++...
T Consensus 149 ~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 228 (655)
T PRK03584 149 IPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYL 228 (655)
T ss_pred CHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecC
Confidence 999999999999999999999999999999999999999999999877655555544443322 2222 23333322
Q ss_pred CCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH-HHHHHhhhhcCCCC
Q 008848 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLKV 396 (551)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~ 396 (551)
..............|+++...... .........+++++||+|||||||.||||+++|++++ +.+......+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 304 (655)
T PRK03584 229 GPAAAAAALPGALLWEDFLAPAEA----AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGP 304 (655)
T ss_pred CCcccccccCCcccHHHHhhcccc----CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCC
Confidence 110011112234567776652211 1122234567899999999999999999999999875 44555556788999
Q ss_pred CCEEEEecCcccchhhHHHHHHHHhCCEEEEecCC---CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCC
Q 008848 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWT 471 (551)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~---~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~ 471 (551)
+|++++.++++|+++.+ ++.+|+.|++++++++. +++..++++|++++||++.++|++++.|.+... ....+++
T Consensus 305 ~d~~~~~~~~~~~~~~~-~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~ 383 (655)
T PRK03584 305 GDRFFWYTTCGWMMWNW-LVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLS 383 (655)
T ss_pred CCEEEEcCCchHHhHHH-HHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChh
Confidence 99999999999986543 66899999999998753 478899999999999999999999999876532 2346789
Q ss_pred CccEEEeecCCCChhhHHHHHHhcc-CCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCC
Q 008848 472 KIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRT 549 (551)
Q Consensus 472 sLr~i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~G 549 (551)
+||.+++|||++++++.+++.+.++ +.++++.||+||++..+....+..+...+++|+|++|++++|+|++|+++ +|
T Consensus 384 sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g 461 (655)
T PRK03584 384 ALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWDEDGRPV-VG 461 (655)
T ss_pred heEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEECCCCCCC-CC
Confidence 9999999999999999999988874 57899999999986544433333445678899999999999999999988 45
No 17
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-52 Score=461.55 Aligned_cols=417 Identities=28% Similarity=0.406 Sum_probs=328.8
Q ss_pred cchHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCCCCCCCCcCCCCcchhhhhhccccccCCCCCCceEEEEe
Q 008848 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (551)
Q Consensus 119 ~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~ 198 (551)
.+|..+.++++++++.||..+.+. +.|..++.++++. ......|+.++.+|.++++++++. +++|+++|+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~---~~~~~~w~~~~~~n~~~~~l~~~~--~~~p~~~Al~~~ 89 (637)
T PRK00174 17 EQYKALYQESVEDPEGFWAEQAKR--LDWFKPFDTVLDW---NAPFIKWFEDGELNVSYNCLDRHL--KTRGDKVAIIWE 89 (637)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh--cCeecCCcccccC---CCCCCccCCCCEeEHHHHHHHHhh--ccCCCCeEEEEE
Confidence 467888999999999999999887 4677888888764 345689999999999999998754 678999999986
Q ss_pred cCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 008848 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (551)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~ 277 (551)
+. ..+..+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 90 ~~--~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~ 167 (637)
T PRK00174 90 GD--DPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRII 167 (637)
T ss_pred CC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHH
Confidence 53 123456899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEEeecceeccCccccchhHHhh---cCCC--ceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCC
Q 008848 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (551)
Q Consensus 278 ~~~~~~vl~~~~~~~~~~~~~~~~~~~~---~~~~--~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (551)
+++++++|+++...+.++..+....+.+ ..+. .++++........ ........|+++...... ......
T Consensus 168 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~ 241 (637)
T PRK00174 168 DAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD-WVEGRDLWWHELVAGASD-----ECEPEP 241 (637)
T ss_pred hcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC-cCCCCcccHHHHHhhcCC-----CCCccc
Confidence 9999999998876555544444333322 1221 2223322111100 001123446666543221 122234
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHHH-HhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCEEEEecC
Q 008848 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (551)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~ 430 (551)
..+++++||+|||||||+||||+++|++++.... .....++++++|++++.++++|..+. +.++.+|+.|++++++++
T Consensus 242 ~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 321 (637)
T PRK00174 242 MDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEG 321 (637)
T ss_pred cCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECC
Confidence 5678999999999999999999999999865443 34445788899999999999999886 568899999999999864
Q ss_pred C---CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCcc--CCCCCCCccEEEeecCCCChhhHHHHHHhccC--Cceecc
Q 008848 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWY--NAIIES 503 (551)
Q Consensus 431 ~---~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~--~~l~n~ 503 (551)
. +++..+++.|++++||++.++|++++.|++.... ...++++||.+++|||++++++.+++.+.++. ++++|.
T Consensus 322 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~ 401 (637)
T PRK00174 322 VPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDT 401 (637)
T ss_pred CCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEec
Confidence 2 3688999999999999999999999999875432 23568899999999999999999998887753 689999
Q ss_pred ccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
||+||++..++...+. .....+++|+|++|++++|+|++|+++|+|.
T Consensus 402 YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~ 449 (637)
T PRK00174 402 WWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGE 449 (637)
T ss_pred ccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCC
Confidence 9999998654432221 2335678999999999999999999999885
No 18
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.9e-52 Score=459.88 Aligned_cols=443 Identities=25% Similarity=0.373 Sum_probs=342.3
Q ss_pred ccccCCcchhccccHHHHHHHhCCccccccCCCCccchHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCCCCC
Q 008848 84 LYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKH 163 (551)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 163 (551)
..|.|.......+++..+.+..... |...+.+|+.++++++++++.||..+++...+.|..++.++++.. ...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~--~~~ 77 (652)
T TIGR01217 5 PLWQPDAQRIAQARMTRFQAWAGEH-----HGAAEGGYDALHRWSVDELDTFWKAVWEWFDVRFSTPCARVVDDR--TMP 77 (652)
T ss_pred CCCCCChhhcccchHHHHHHHHHHh-----hCCChhhHHHHHHHHHhCHHHHHHHHHHhCCcceeCCCceeeeCC--CCC
Confidence 4777776656667766554443321 333446789999999999999999999998889999999998652 234
Q ss_pred CCCcCCCCcchhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC
Q 008848 164 GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM 242 (551)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~ 242 (551)
...|+.++.+|+++++++. .++++|+++.+. .+..+++||+||.++++++|++|++. +++||+|+|+++|
T Consensus 78 ~~~wf~~~~~n~~~~~~~~------~~~~~a~~~~~~---~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n 148 (652)
T TIGR01217 78 GAQWFPGARLNYAENLLRA------AGTEPALLYVDE---THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPN 148 (652)
T ss_pred CCEECCCCeeeHHHHHhcc------CCCCeEEEEECC---CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence 5789999999999999862 368999998754 24567899999999999999999999 9999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhh---cCCC--ceEEecCC
Q 008848 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAPL--KAIVLPAI 317 (551)
Q Consensus 243 ~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~---~~~~--~~~vv~~~ 317 (551)
++++++++|||+++|++++|++|.++++++.+++++++++++|+++.+.+.++..+....+.+ ..+. .++++...
T Consensus 149 ~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~ 228 (652)
T TIGR01217 149 IPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYL 228 (652)
T ss_pred CHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCC
Confidence 999999999999999999999999999999999999999999999887766666555444433 2221 23333321
Q ss_pred CCCC-CCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH-HHHHHhhhhcCCC
Q 008848 318 GNDV-GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLK 395 (551)
Q Consensus 318 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~-~~~~~~~~~~~~~ 395 (551)
.... ..........|+++...... .........++++++|+|||||||.||||+++|++++ +........++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~ 304 (652)
T TIGR01217 229 GPRETEAPKIDGALDLEDFTAAAQA----AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLG 304 (652)
T ss_pred CCcccccccccCcccHHHHHhcccC----CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCC
Confidence 1100 00001134457776543211 0111223456899999999999999999999999965 3444455567899
Q ss_pred CCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCC---CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCC
Q 008848 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDW 470 (551)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~---~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l 470 (551)
++|+++++++++|+++.+ ++.+|+.|++++++++. +++..++++|++++||++.++|++++.+..... ....++
T Consensus 305 ~~d~~~~~~~~~~~~~~~-~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l 383 (652)
T TIGR01217 305 PGDRLFYYTTTGWMMWNW-LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDL 383 (652)
T ss_pred CCcEEEEeCCcchhhhHH-HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCCh
Confidence 999999999999986544 56899999999998753 367789999999999999999998888765421 234678
Q ss_pred CCccEEEeecCCCChhhHHHHHHhcc-CCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccC
Q 008848 471 TKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYV 547 (551)
Q Consensus 471 ~sLr~i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp 547 (551)
++||.+++|||++++++.+++.+.++ ...+.+.||+||++.++....+..+...+++|+|.+|++++|+|++|++++
T Consensus 384 ~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd~~g~~~~ 461 (652)
T TIGR01217 384 SALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWDPEGKPVT 461 (652)
T ss_pred hheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEECCCCCCCC
Confidence 99999999999999999999888765 346789999999764443333334455688999999999999999999884
No 19
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-48 Score=402.45 Aligned_cols=426 Identities=32% Similarity=0.439 Sum_probs=348.6
Q ss_pred CCCCccchHHHHHHhhhChHHHHHHHHhhccceeeccccccccCCCCCCCCCCcCCCCcchhhhhhccccccCCCCCCce
Q 008848 114 YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (551)
Q Consensus 114 y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~ 193 (551)
|...+.+|..|+++++++++.||..+++++....... ..............|+.+...|++++|++++.... .++++
T Consensus 6 ~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~w~~g~~ln~~~n~~~~~~~~~-~~~~~ 82 (626)
T KOG1175|consen 6 YKNSLSSYREFYRFSVEDPERFWGEVAKELHWKFPWP--RCNKDENKGNPFTKWFPGAFLNACYNCLDRHIKEK-GGDKV 82 (626)
T ss_pred cCCCHHHHHHHHhhcccCHHHHHHHhhhhhhcccCcc--ccccccccCCCCccccccchhhhhHhhhhhhhhhc-CCCCc
Confidence 5566778999999999999999999999965332222 22222223456779999999999999999876445 79999
Q ss_pred EEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHH
Q 008848 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (551)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l 272 (551)
|+++.+.+ .+....+||.||.+++.++|..|++. +++||+|+++||+.+++++++|||.++|++.+++...+++.++
T Consensus 83 a~~~~~~~--~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l 160 (626)
T KOG1175|consen 83 AIIFEGNE--GGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKEL 160 (626)
T ss_pred EEEEEecC--CCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHH
Confidence 99998652 23344599999999999999999988 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCC
Q 008848 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (551)
Q Consensus 273 ~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (551)
...++++++++|++.+...+.++.++....+.+................-......+..|+++...... ..++..
T Consensus 161 ~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~-----~~~~~~ 235 (626)
T KOG1175|consen 161 LDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASP-----EHPCVP 235 (626)
T ss_pred HHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCC-----CCCcee
Confidence 999999999999999999999998888777665433211110000000000011135567776555543 233567
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhh-HHHHHHhhhhcCCCCCCEEEEecCcccchhhHH-HHHHHHhCCEEEEecC
Q 008848 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSS-IRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQG 430 (551)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l-~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~~lvl~~~ 430 (551)
.+.+|+.+|+|||||||.|||+.+++.+. +..+......++++++|++++.+.++|+++.+. .+++|++|++++++++
T Consensus 236 ~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g 315 (626)
T KOG1175|consen 236 VKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEG 315 (626)
T ss_pred cCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcC
Confidence 77899999999999999999999998774 555666667899999999999999999999865 6779999999999987
Q ss_pred CC-ChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecccccc
Q 008848 431 SP-LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (551)
Q Consensus 431 ~~-~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (551)
.+ ++..+++.+.+++||++++.|++++.|.+... ...+++++||.+.++||++.++.++|+.+.++..+|++.||+|
T Consensus 316 ~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qt 395 (626)
T KOG1175|consen 316 PPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQT 395 (626)
T ss_pred CCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeee
Confidence 66 88999999999999999999999998776543 2344457899999999999999999999998744799999999
Q ss_pred ccccccccCCcCC-CCCcCccCCCCCCceEEEECCCCCccCCC
Q 008848 508 ELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYVRT 549 (551)
Q Consensus 508 E~~~~~~~~~~~~-~~~~~~iG~p~~g~~v~IlD~~g~~vp~G 549 (551)
|++..++.+.+.. +.+++++|+|.+|+.+.|+|++|+++|++
T Consensus 396 EtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~ 438 (626)
T KOG1175|consen 396 ETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPS 438 (626)
T ss_pred ccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCC
Confidence 9998888877766 88999999999999999999999999884
No 20
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.1e-50 Score=440.59 Aligned_cols=480 Identities=19% Similarity=0.183 Sum_probs=370.7
Q ss_pred HHhhCCCchHHHHHHHHHHHHhhhcCCC-cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCCC----c---
Q 008848 13 LMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP----L--- 84 (551)
Q Consensus 13 ~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~~----~--- 84 (551)
..++++...+..+|.++++++++....+ +||++||++ +++.+.+.|..+ +|+ |+++|++++...... .
T Consensus 67 ~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~h~~~p~~~-l~~~~~~~~~~~-~~l--~~~~~~~~~~~~~~~~~~~~~~~ 142 (642)
T COG1020 67 TLPLRLDISGRVTFAELLARLRELALGALEHQDLPGEQ-LVERLGRERSLS-EPL--FDVVFVLQNGPTAGLKLPGLRVE 142 (642)
T ss_pred eeeeeeccCCCCCHHHHHHHHHHHHHHHhhccCCCHHH-HHHHHhhhccCC-CCc--eeeEEEecCcccccccccccccc
Confidence 4567888888899999999999998887 999999999 999999999888 889 999999988654321 1
Q ss_pred cccCCcchhccccHHHHHHHhCCcccccc-CCCCccchHHHHHHhhhChHHHHHHHHhhccceeeccccc--cccCCCCC
Q 008848 85 YWFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKC--ILDRTDKS 161 (551)
Q Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~--~l~~~~~~ 161 (551)
.+... ....++|+.+...+. ++...+ |.. ++|++.+++++..+|..++..+..++...... .+...++
T Consensus 143 ~~~~~-~~~~~~d~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ll~~~e~- 213 (642)
T COG1020 143 ELGIE-TPAAKLDLALAVVEG--GLRLSFDYAR-----ELFDAETIERELRHFLQLLAALADAPRTSLSALPLLLPSER- 213 (642)
T ss_pred ccccc-CcccccceEEEEEeC--ceEEEEEeec-----ccCCHHHHHHHHHHHHHHHHHHHhCcccCcccCCCCCHHHH-
Confidence 11111 345567777666555 666777 888 99999999999999999999987555522222 1222222
Q ss_pred CCCCCcCCCCcchhh-hhhcc--ccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEE
Q 008848 162 KHGGTWLPGSVLNIA-ECCLL--PSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237 (551)
Q Consensus 162 ~~~~~~~~~~~~~~~-~~~~~--~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~ 237 (551)
..|+ ....... ..+++ ...++.+.|+++|+.+.+. .+||+||+.+++++|+.|++. ++++++|+
T Consensus 214 ---~~~~-~~~~~~~~~~~i~~~f~~~a~~~p~~~a~~~~~~--------~lty~el~~~a~~la~~l~~~g~~~~~~V~ 281 (642)
T COG1020 214 ---EVWN-ALAAPIPLRLTIHLLFEEQAATTPDAVALVRGGQ--------QLTYAELDARANRLARLLISLGVGPGETVA 281 (642)
T ss_pred ---hhcc-ccccCCCccchHHHHHHHHHHhCCCceeEecCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCeEE
Confidence 2355 3222221 11222 2346789999999998766 899999999999999999999 99999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCC
Q 008848 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI 317 (551)
Q Consensus 238 i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 317 (551)
++++++++++++++|++|+|++|+|+||.+|.+|+.++++++++++++++..........+.
T Consensus 282 i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------ 343 (642)
T COG1020 282 ILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG------------------ 343 (642)
T ss_pred EEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc------------------
Confidence 99999999999999999999999999999999999999999999999998542110000000
Q ss_pred CCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCC
Q 008848 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (551)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (551)
...+........ .. .......+++++|++|||||||+||||+++|+++.+.+.+....+.++.+
T Consensus 344 ------------~~~~~~~~~~~~---~~-~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~ 407 (642)
T COG1020 344 ------------LALDDALSEIPD---TD-PIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDAD 407 (642)
T ss_pred ------------cccccccccCCc---cC-cccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcc
Confidence 000000000000 00 00123355899999999999999999999999999988888888999999
Q ss_pred CEEEEecCcccchhhHHHHHHHHhCCEEEEecCC--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccC--CCCCCCc
Q 008848 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKI 473 (551)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~sL 473 (551)
|+++..++++||.+.+++|.+++.|+++++.+.. .++..+.+.+.++++|++..+|+++..+....... ....+.+
T Consensus 408 d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~l 487 (642)
T COG1020 408 DRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERL 487 (642)
T ss_pred cEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccc
Confidence 9999999999999999999999999999998743 37888999999999999999999999998762221 1223359
Q ss_pred cEEEeecCCCChhhHHHHHHhcc-CCceeccccccccccccccCCcCCCCC-cCccCCCCCCceEEEECCCCCccCCCCC
Q 008848 474 RSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQA-FGAFSTATMTAGLVILDECGVPYVRTFS 551 (551)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~-~~~iG~p~~g~~v~IlD~~g~~vp~Gv~ 551 (551)
|.+++|||+++..+...+..... ...+.|.||+||+++.+.......... ..+||+|++|++++|+|+.++++|.||+
T Consensus 488 r~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~ 567 (642)
T COG1020 488 RQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVP 567 (642)
T ss_pred cEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCC
Confidence 99999999999999887766544 367999999999776544333221111 4699999999999999999999999974
No 21
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.6e-47 Score=409.48 Aligned_cols=341 Identities=19% Similarity=0.172 Sum_probs=275.7
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++||++|+++.++ ++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 58 ~a~~~pd~~Al~~~~~--------~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l 129 (549)
T PRK07788 58 AARRAPDRAALIDERG--------TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILL 129 (549)
T ss_pred HHHHCCCceEEEECCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 4588999999998766 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
++.++.+++.+++++++++++|+++.+.. ....+.........++...... .....+...++++......
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 199 (549)
T PRK07788 130 NTGFSGPQLAEVAAREGVKALVYDDEFTD------LLSALPPDLGRLRAWGGNPDDD--EPSGSTDETLDDLIAGSST-- 199 (549)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhHH------HHHhhccccccceEEEEecCcc--ccCCcCcccHHHHhcCCCC--
Confidence 99999999999999999999999875321 1111111111111111111100 0111244567776654321
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCC
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (551)
...+...++.++|+|||||||.||||+++|+++.+.+......+++.++++++...|++|..++..++.++..|+
T Consensus 200 -----~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~ 274 (549)
T PRK07788 200 -----APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGS 274 (549)
T ss_pred -----CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCC
Confidence 111234577899999999999999999999999988777777788999999999999999999877888999999
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCcc--CCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 424 ~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
++++.. .+++..+++.+++++||++.++|++++.|++.... ...++++||.+++|||++++++.+++.+.++ .+++
T Consensus 275 ~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~l~ 352 (549)
T PRK07788 275 TVVLRR-RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFG-PVLY 352 (549)
T ss_pred EEEECC-CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhC-ccce
Confidence 999874 57889999999999999999999999999876543 4556889999999999999999999988876 6899
Q ss_pred ccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|.||+||++..++..........+++|+|++|++++|+|++|+++|+|.
T Consensus 353 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~ 401 (549)
T PRK07788 353 NLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGV 401 (549)
T ss_pred eccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCC
Confidence 9999999876443322222345678999999999999999999999885
No 22
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8e-46 Score=402.62 Aligned_cols=361 Identities=22% Similarity=0.280 Sum_probs=289.9
Q ss_pred CcCCCCcchhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 008848 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (551)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~ 244 (551)
.|+.+...|..+.++++++ +..+|+++|+++.+. ...+++||+||.++++++|++|.+. +++||+|+++++|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~----~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~ 109 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHA-DGGRKDKVALRYLDA----SRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIP 109 (570)
T ss_pred ccCCCCceeHHHHHHHHhh-ccCCCCceEEEEECC----CCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH
Confidence 6777888899888887654 235799999998653 1235899999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC--ceEEecCCCCCCC
Q 008848 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG 322 (551)
Q Consensus 245 e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~vv~~~~~~~~ 322 (551)
++++++|||+++|++++|+++.++++++.+++++++++++|+++........ ...+. .++++.....
T Consensus 110 ~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--- 178 (570)
T PRK04319 110 ELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--------DDLPSLKHVLLVGEDVE--- 178 (570)
T ss_pred HHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--------hcCCCceEEEEECCCcC---
Confidence 9999999999999999999999999999999999999999998764321100 01111 1222221110
Q ss_pred CCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEE
Q 008848 323 IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCW 402 (551)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~ 402 (551)
...+..++.++...... ........++++++|+|||||||.||||+++|+++++.+......++++++|++++
T Consensus 179 --~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~ 251 (570)
T PRK04319 179 --EGPGTLDFNALMEQASD-----EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWC 251 (570)
T ss_pred --CCcCccCHHHHHhhcCC-----cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEe
Confidence 11233456665543321 11223345689999999999999999999999999888777777788999999999
Q ss_pred ecCcccchhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEee
Q 008848 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFAST 479 (551)
Q Consensus 403 ~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~g 479 (551)
..+++|..+. +.++.+++.|+++++.+..+++..+++.|+++++|++.++|++++.|.+... ....++++||.+++|
T Consensus 252 ~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~g 331 (570)
T PRK04319 252 TADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSV 331 (570)
T ss_pred cCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEc
Confidence 9999998876 5688999999999998777889999999999999999999999999986532 234568899999999
Q ss_pred cCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|+++++++.+++++.++ .++++.||+||++..++.........++++|+|++|++++|+|++|+++|+|.
T Consensus 332 G~~l~~~~~~~~~~~~g-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~ 401 (570)
T PRK04319 332 GEPLNPEVVRWGMKVFG-LPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNR 401 (570)
T ss_pred ccCCCHHHHHHHHHHhC-CCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCC
Confidence 99999999999888775 78999999999986544333323345678999999999999999999998874
No 23
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7e-46 Score=398.18 Aligned_cols=341 Identities=23% Similarity=0.233 Sum_probs=272.4
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+|+++|+++.+.. .++||+||+++++++|++|++. |++||+|+|+++|++++++++|||+++|++++|+
T Consensus 20 ~a~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpl 93 (534)
T COG0318 20 AARRNPDRPALIFLGRG------GRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPL 93 (534)
T ss_pred HHHhCCCceEEEEcCCC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeec
Confidence 34789999999998771 0499999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCC-cchHHhhccCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQD-LSWKDFLSSVDYH 342 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 342 (551)
+|.+..+++.+++++++++++++++.+. +....+....+....+....... ... ..++++......
T Consensus 94 n~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~- 160 (534)
T COG0318 94 NPRLTPRELAYILNDAGAKVLITSAEFA------ALLEAVAEALPVVLVVLLVGDAD------DRLPITLEALAAEGPG- 160 (534)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcccch------hHHHHHhccCCcceEEEeccccc------ccccccHHHHhhccCC-
Confidence 9999999999999999999999997521 12222222222111222111110 000 245555333221
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC--CCCCCEEEEecCcccchhhHH-HHHHH
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPVI-LFSSF 419 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~~-~~~~l 419 (551)
.........++|+|+|+|||||||.||||++||+|++.+.......+. +++.|++++++|++|++|+.. ++.++
T Consensus 161 ---~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~ 237 (534)
T COG0318 161 ---PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPL 237 (534)
T ss_pred ---cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHH
Confidence 111112257899999999999999999999999999988887777777 899999999999999999975 44559
Q ss_pred HhCCEEEEecC-CCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCC-ccEEEeecCCCChhhHHHHHHhccC
Q 008848 420 LNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK-IRSFASTGETSNVDDDLWLSSKAWY 497 (551)
Q Consensus 420 ~~G~~lvl~~~-~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~s-Lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (551)
+.|+++++.++ .+++..++..+.++++|++.++|+++..|++.......++++ ||.+++||++++++++++++++++.
T Consensus 238 ~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~ 317 (534)
T COG0318 238 LGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGP 317 (534)
T ss_pred HcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCC
Confidence 99999999774 578899999999999999999999999999887666555665 9999999999999999999999875
Q ss_pred CceeccccccccccccccCCcCC-CCCcCccCCCCCCceEEEECCCCC-ccC
Q 008848 498 NAIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGV-PYV 547 (551)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~g~~v~IlD~~g~-~vp 547 (551)
.+++++||+||++..++...... ....+++|+|+||++++|+|++++ ++|
T Consensus 318 ~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p 369 (534)
T COG0318 318 IAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP 369 (534)
T ss_pred CceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC
Confidence 68999999999986555544433 235678899999999999997664 666
No 24
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3.6e-46 Score=401.97 Aligned_cols=342 Identities=18% Similarity=0.180 Sum_probs=266.5
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
.++++|+++|+.+.+. +++||+||.++++++|++|.+ .+||+|+|+++|++++++++|||+++|++++|++
T Consensus 28 ~~~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~lA~~L~~--~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~ 98 (539)
T PRK06334 28 LCSEMTTATVCWDEQL-------GKLSYNQVRKAVIALATKVSK--YPDQHIGIMMPASAGAYIAYFATLLSGKIPVMIN 98 (539)
T ss_pred HHHhCCCceEEEeCCC-------CcccHHHHHHHHHHHHHHHhh--ccCCeEEEEcCCchHHHHHHHHHHhcCCeeEecC
Confidence 4578999999987653 289999999999999999987 4999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhc---CCCceEEecCCCCCCCCCCCCCCcchHHhhccC--
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV-- 339 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~---~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~-- 339 (551)
|.++.+++.++|++++++++++++++.. .+..+... .+..++.+.... ....+.+.....
T Consensus 99 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~ 163 (539)
T PRK06334 99 WSQGLREVTACANLVGVTHVLTSKQLMQ------HLAQTHGEDAEYPFSLIYMEEVR---------KELSFWEKCRIGIY 163 (539)
T ss_pred cccchHHHHHHHHHcCCCEEEehHHHHH------HHhhhhhccccccccEEEEehhh---------hhccHHHhhhhhhh
Confidence 9999999999999999999999875321 11111110 111222221100 000111110000
Q ss_pred ---CCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhH-HH
Q 008848 340 ---DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-IL 415 (551)
Q Consensus 340 ---~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~ 415 (551)
...............++++++|+|||||||.||||+++|+++.+...+....++++++|+++++.|++|.+++. .+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~ 243 (539)
T PRK06334 164 MSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCT 243 (539)
T ss_pred hcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHH
Confidence 00000000111234678999999999999999999999999988877777778889999999999999988874 47
Q ss_pred HHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhc
Q 008848 416 FSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (551)
Q Consensus 416 ~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~ 495 (551)
+.++..|+++++....+++..+++.|+++++|++.++|++++.|++.......++++||.+++||+++++++.+++.+.+
T Consensus 244 ~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 323 (539)
T PRK06334 244 LFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTF 323 (539)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHC
Confidence 88999999999876556889999999999999999999999999876544456689999999999999999999999888
Q ss_pred cCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECC-CCCccCCCC
Q 008848 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYVRTF 550 (551)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~-~g~~vp~Gv 550 (551)
++++++|.||+||++..++..........+++|+|++|++++|+|+ +++++|+|.
T Consensus 324 ~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~ 379 (539)
T PRK06334 324 PHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGE 379 (539)
T ss_pred CCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCc
Confidence 7789999999999986544433333334568999999999999995 588999885
No 25
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1e-45 Score=406.54 Aligned_cols=350 Identities=16% Similarity=0.151 Sum_probs=257.1
Q ss_pred cCCCCCCceEEEEecC-CCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
+++++||++|+.+.+. .+..+.++.+||+||+++++++|++|+++ +++||+|+|+++|++||++++|||+++|+++||
T Consensus 54 ~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vp 133 (666)
T PLN02614 54 SVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVP 133 (666)
T ss_pred HHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEE
Confidence 3478999999986421 00113455799999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC-----C-ceEEecCCCCCCC---CCCCCCCcchH
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-----L-KAIVLPAIGNDVG---IPLREQDLSWK 333 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~vv~~~~~~~~---~~~~~~~~~~~ 333 (551)
+++.++.+++.+++++++++++|+++.. ...+....+ . .++++........ ........+++
T Consensus 134 l~~~~~~~~l~~il~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 204 (666)
T PLN02614 134 LYDTLGAGAVEFIISHSEVSIVFVEEKK---------ISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWD 204 (666)
T ss_pred ecCCCCHHHHHHHHhccCCCEEEECHHH---------HHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHH
Confidence 9999999999999999999999998642 112211111 1 1222211000000 00000124566
Q ss_pred HhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhc-----CCCCCCEEEEecCccc
Q 008848 334 DFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-----DLKVGDVYCWPTNLGW 408 (551)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~~ 408 (551)
+++..... .........++|+|+|+|||||||.||||++||+|++..+......+ +++++|++++++|++|
T Consensus 205 ~~~~~~~~----~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H 280 (666)
T PLN02614 205 EFLKLGEG----KQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAH 280 (666)
T ss_pred HHHhhccc----CCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHH
Confidence 66543321 01111224578999999999999999999999999988766544332 5788999999999999
Q ss_pred chhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCcc-----------------------
Q 008848 409 VMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----------------------- 465 (551)
Q Consensus 409 ~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~----------------------- 465 (551)
..+....+..++.|+++++.+ .++..+++.|+++++|++.++|++++.|.+....
T Consensus 281 ~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 358 (666)
T PLN02614 281 IFDRVIEECFIQHGAAIGFWR--GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGN 358 (666)
T ss_pred HHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 888755566788999998875 4778999999999999999999999987642100
Q ss_pred --------CCC-------------CC-CCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCC
Q 008848 466 --------EGL-------------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA 523 (551)
Q Consensus 466 --------~~~-------------~l-~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 523 (551)
... .+ ++||.+++||+++++++ .++...+++++++|+||+||+++.++...+.....
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~ 437 (666)
T PLN02614 359 MKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDM 437 (666)
T ss_pred HHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeeccccCCc
Confidence 000 11 68999999999999875 55556665689999999999875433322222235
Q ss_pred cCccCCCCCCceEEEEC-CC--CCccCCCC
Q 008848 524 FGAFSTATMTAGLVILD-EC--GVPYVRTF 550 (551)
Q Consensus 524 ~~~iG~p~~g~~v~IlD-~~--g~~vp~Gv 550 (551)
.+++|+|+||++++|+| ++ ++++|+|.
T Consensus 438 ~gsvG~p~pg~evki~d~~~~~~~~~~~g~ 467 (666)
T PLN02614 438 LGTVGPPVPNVDIRLESVPEMEYDALASTP 467 (666)
T ss_pred CCcccCcCCceEEEEeeecccCcccCCCCC
Confidence 68999999999999998 33 46777764
No 26
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.9e-45 Score=379.35 Aligned_cols=345 Identities=25% Similarity=0.252 Sum_probs=278.6
Q ss_pred CCCc-eEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh---cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 189 EDNT-VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM---FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 189 ~pd~-~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~---v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
.+++ +++++... ..+.+||+|+.+++.|+|.+|.++ +++||+|++++||+++++++++||+.+||++.|++
T Consensus 29 ~~~~~~~~i~~~~-----~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~N 103 (537)
T KOG1176|consen 29 YLDRNTSLVYQDS-----DGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLN 103 (537)
T ss_pred cccCcceEEEecC-----CCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccC
Confidence 3444 77887662 013999999999999999999965 68899999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcc-hHHhhccCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLS-WKDFLSSVDYHP 343 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 343 (551)
|.+.+.++.+.++++++++++++.... +...........+++++................. +.++......
T Consensus 104 p~~~~~ei~~~~~~s~~kiif~d~~~~------~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 175 (537)
T KOG1176|consen 104 PRLTASEIAKQLKDSKPKLIFVDEDFY------DKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP-- 175 (537)
T ss_pred cccCHHHHHHHHHhcCCeEEEEcCchH------HHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC--
Confidence 999999999999999999999998643 3333333333445555544311111111111111 3333322211
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCC
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (551)
.. ....+.+|++.|+|||||||.||||++||++++...........++..++.++..|++|..|++.++.+++.|+
T Consensus 176 ---~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~ 251 (537)
T KOG1176|consen 176 ---DG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGG 251 (537)
T ss_pred ---cc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCC
Confidence 11 34556799999999999999999999999999888776666677778999999999999999988888777777
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecc
Q 008848 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (551)
Q Consensus 424 ~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (551)
+.++....+++..+++.|++|+||++.++|+++..|++......++++++|.+.+||+++++++.++++++++...+.++
T Consensus 252 ~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~ 331 (537)
T KOG1176|consen 252 TTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQG 331 (537)
T ss_pred ceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEe
Confidence 77777767899999999999999999999999999999876677899999999999999999999999999997899999
Q ss_pred ccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 504 CGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
||+||+++..+.+......+++++|++++|.++.|+++.|+.+|++-
T Consensus 332 YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~ 378 (537)
T KOG1176|consen 332 YGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQ 378 (537)
T ss_pred eccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCC
Confidence 99999996544433322247899999999999999999999999874
No 27
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.9e-45 Score=405.00 Aligned_cols=351 Identities=17% Similarity=0.137 Sum_probs=266.9
Q ss_pred cCCCCCCceEEEEec-CCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
.++++|+++|+.+.. ..+..+.++.+||+||+++++++|++|+++ +++||+|+|+++|++||+++++||+++|++++|
T Consensus 53 ~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vp 132 (651)
T PLN02736 53 AVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVP 132 (651)
T ss_pred HHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEE
Confidence 347899999996421 111123467899999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCC-C-CC--CCCCCCcchHHhhc
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGND-V-GI--PLREQDLSWKDFLS 337 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~-~-~~--~~~~~~~~~~~~~~ 337 (551)
+++.++.+++.+++++++++++|++.... +....+....+. +.+++...... . .. .......+|++++.
T Consensus 133 l~~~~~~~~l~~il~~~~~~~l~~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (651)
T PLN02736 133 LYDTLGPDAVKFIVNHAEVAAIFCVPQTL------NTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLA 206 (651)
T ss_pred eecCCCHHHHHHHHhccCCCEEEECHHHH------HHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHH
Confidence 99999999999999999999999987532 112222222222 22222111000 0 00 00112345676665
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHH
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (551)
.... .........++|+++|+|||||||.||||++||++++..+.+....+++.++|++++++|++|+.+.+.++.
T Consensus 207 ~~~~----~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~ 282 (651)
T PLN02736 207 QGRS----SPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIV 282 (651)
T ss_pred hccc----CCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 4321 011122346799999999999999999999999999988887777788999999999999999999888888
Q ss_pred HHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc-----------------------------cCC-
Q 008848 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----------------------------LEG- 467 (551)
Q Consensus 418 ~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~-----------------------------~~~- 467 (551)
+++.|+++++.++ ++..+++.|+++++|++.++|++++.|.+... ...
T Consensus 283 ~l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (651)
T PLN02736 283 MLHYGVAVGFYQG--DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSP 360 (651)
T ss_pred HHHcCCEEEEeCC--CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999998764 66789999999999999999999988754310 000
Q ss_pred -----------CCC-CCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCce
Q 008848 468 -----------LDW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAG 535 (551)
Q Consensus 468 -----------~~l-~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~ 535 (551)
..+ +++|.+++||+++++++.+++...++ ++++|+||+||+++.++.... .....+++|+|+||++
T Consensus 361 ~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g-~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~pg~~ 438 (651)
T PLN02736 361 MWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG-GRVLEGYGMTETSCVISGMDE-GDNLSGHVGSPNPACE 438 (651)
T ss_pred hHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC-CCeEEEechHHhchheeccCC-CCCCCCccCCccCceE
Confidence 011 48999999999999999999887775 789999999998765433322 2345689999999999
Q ss_pred EEEECC-------CCCccCCC
Q 008848 536 LVILDE-------CGVPYVRT 549 (551)
Q Consensus 536 v~IlD~-------~g~~vp~G 549 (551)
++|+|. +++++|.|
T Consensus 439 v~i~d~~~~~~~~~~~~~~~G 459 (651)
T PLN02736 439 VKLVDVPEMNYTSEDQPYPRG 459 (651)
T ss_pred EEEEEccccCcccCCCCCCCc
Confidence 999983 34555555
No 28
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.9e-45 Score=392.86 Aligned_cols=336 Identities=14% Similarity=0.071 Sum_probs=269.3
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++||++|+++.++ ++||+||+++++++|++|.++ +++||+|+++++|++++++++|||+++|++++|+
T Consensus 52 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 123 (537)
T PRK13382 52 AAQRCPDRPGLIDELG--------TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLL 123 (537)
T ss_pred HHHhCCCCeEEEeCCC--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEec
Confidence 4588999999998665 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
+|.++.+++.+++++++++++|++..+. ..........+....++..... .....++++......
T Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-- 188 (537)
T PRK13382 124 NTSFAGPALAEVVTREGVDTVIYDEEFS------ATVDRALADCPQATRIVAWTDE-------DHDLTVEVLIAAHAG-- 188 (537)
T ss_pred CcccCHHHHHHHHHhcCCCEEEEchhhH------HHHHHHHhhccccceEEEecCC-------cccccHHHHhhccCc--
Confidence 9999999999999999999999987532 1111211111111111111000 012234444432211
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCC
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (551)
. .....+++.++++|||||||.||||+++|++++.........+.+..+++++...|++|..++..++.++..|+
T Consensus 189 ---~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~ 263 (537)
T PRK13382 189 ---Q--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLAC 263 (537)
T ss_pred ---C--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCc
Confidence 0 11224578999999999999999999999998887777767778889999999999999999878889999999
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 424 ~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
++++.+ .+++..+++.|+++++|++.++|++++.|++... ....+++++|.+++|||++++++++.+.+.++ .+++
T Consensus 264 ~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~ 341 (537)
T PRK13382 264 TIVTRR-RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG-DVIY 341 (537)
T ss_pred EEEECC-CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC-CcEE
Confidence 998864 5788999999999999999999999999987532 12345678999999999999999999988876 6899
Q ss_pred ccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|.||+||++..++..........+++|+|++|++++|+|++|+++|.|.
T Consensus 342 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~ 390 (537)
T PRK13382 342 NNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGE 390 (537)
T ss_pred ecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCC
Confidence 9999999986544332222345679999999999999999999999874
No 29
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=359.23 Aligned_cols=351 Identities=19% Similarity=0.197 Sum_probs=288.2
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+++.||+.|+++...+ .++||+|+.+.++.+|.+|+++ +++||||+|..||+.+|+..+|||.++|.+.+++|
T Consensus 60 t~~v~dkea~Vf~~eg------~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~N 133 (596)
T KOG1177|consen 60 TERVPDKEAAVFDHEG------IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLN 133 (596)
T ss_pred hhccCcceEEEEeecc------chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccC
Confidence 4778999999987653 3799999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhc----------------CCCceEEecCCCCCCCCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA----------------APLKAIVLPAIGNDVGIPLREQ 328 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~vv~~~~~~~~~~~~~~ 328 (551)
|+|+.+++++.|+..+++++++...+.. -.....+.+. ++....++...... .-++
T Consensus 134 P~Yq~~elr~~L~k~~~k~l~~p~~~k~----~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~----~~~G 205 (596)
T KOG1177|consen 134 PAYQSEELRYVLKKVGCKALFAPPQFKT----QNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH----PLPG 205 (596)
T ss_pred cccccHHHHHHHhhcCeEEEEccchhhh----chHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC----cCCC
Confidence 9999999999999999999999876531 1111111111 12223333322111 1236
Q ss_pred CcchHHhhccCCCCCCCC-CCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcc
Q 008848 329 DLSWKDFLSSVDYHPRPN-YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLG 407 (551)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (551)
...++|++........+. ........|||++.|.|||||||.|||+.+||-|++|+......+.++...++++...|++
T Consensus 206 a~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~ 285 (596)
T KOG1177|consen 206 AFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLY 285 (596)
T ss_pred ceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchH
Confidence 667788776654311100 1112356789999999999999999999999999999999888899999988999999999
Q ss_pred cchhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChh
Q 008848 408 WVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (551)
Q Consensus 408 ~~~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~ 486 (551)
|..+. ..++.+|..|+|+|++...+++...++.|.++++|+++++|+|+..|++.......+++++|.++.||+++|++
T Consensus 286 H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~e 365 (596)
T KOG1177|consen 286 HCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPE 365 (596)
T ss_pred HHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHH
Confidence 99995 67889999999999988889999999999999999999999999999998888889999999999999999999
Q ss_pred hHHHHHHhccCCceeccccccccccccccCCcCC--CCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+.+.+.....-..+...||+||++...+.....+ .+...++|+.+++.+..|+|++|.++|.|+
T Consensus 366 Llk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~ 431 (596)
T KOG1177|consen 366 LLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEVPLGT 431 (596)
T ss_pred HHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCccccCC
Confidence 9998887654335889999999986544333322 234578999999999999999999999986
No 30
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.9e-45 Score=401.38 Aligned_cols=342 Identities=18% Similarity=0.155 Sum_probs=251.2
Q ss_pred cCCCCCCceEEEEecC-CCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
.++++|+++|+.+... ....+.++++||+||+++++++|++|+++ +++||+|+|+++|++||++++|||+++|+++||
T Consensus 52 ~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vp 131 (660)
T PLN02861 52 AVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVP 131 (660)
T ss_pred HHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEE
Confidence 3578999999976310 00124567899999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC--Cc-eEEecCCCCCCC---CCCCCCCcchHHhh
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LK-AIVLPAIGNDVG---IPLREQDLSWKDFL 336 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~-~~vv~~~~~~~~---~~~~~~~~~~~~~~ 336 (551)
+++.++.+++.++|++++++++|+++... +.........+ .+ ++.+........ ........+|+++.
T Consensus 132 l~~~~~~~~l~~il~~s~~~~v~~~~~~~------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (660)
T PLN02861 132 LYDTLGANAVEFIINHAEVSIAFVQESKI------SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFS 205 (660)
T ss_pred ecCCCCHHHHHHHHHcCCCCEEEECHHHH------HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHH
Confidence 99999999999999999999999976421 11111111111 11 222211100000 00001124566665
Q ss_pred ccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC-----CCCCCEEEEecCcccchh
Q 008848 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-----LKVGDVYCWPTNLGWVMG 411 (551)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-----~~~~d~~l~~~~~~~~~~ 411 (551)
..... ........++|+|+|+|||||||.||||++||++++..+......++ +.++|++++++|++|..+
T Consensus 206 ~~~~~-----~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~ 280 (660)
T PLN02861 206 LMGSL-----DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYD 280 (660)
T ss_pred HhCcc-----cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHH
Confidence 43321 01112345799999999999999999999999999887665544333 468899999999999988
Q ss_pred hHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcC----------------------------
Q 008848 412 PVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN---------------------------- 463 (551)
Q Consensus 412 ~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~---------------------------- 463 (551)
....+.+++.|+++++.+ .++..+++.|+++++|++.++|++++.|.+..
T Consensus 281 ~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~ 358 (660)
T PLN02861 281 QVIETYCISKGASIGFWQ--GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRK 358 (660)
T ss_pred HHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhc
Confidence 755556899999998874 46789999999999999999999999886410
Q ss_pred ---------ccCCC-------CC-CCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCc
Q 008848 464 ---------CLEGL-------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGA 526 (551)
Q Consensus 464 ---------~~~~~-------~l-~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~ 526 (551)
..... .+ +++|.+++||+++++++.+ +...++...++|+||+||+++.++..........++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gs 437 (660)
T PLN02861 359 GLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGT 437 (660)
T ss_pred CCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCC
Confidence 00000 01 5799999999999999755 555555457999999999876443322222234689
Q ss_pred cCCCCCCceEEEEC
Q 008848 527 FSTATMTAGLVILD 540 (551)
Q Consensus 527 iG~p~~g~~v~IlD 540 (551)
+|+|++|++++|+|
T Consensus 438 vG~p~p~~ev~i~d 451 (660)
T PLN02861 438 VGVPMTTIEARLES 451 (660)
T ss_pred ccCccCceEEEEEE
Confidence 99999999999998
No 31
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.2e-44 Score=393.78 Aligned_cols=358 Identities=20% Similarity=0.148 Sum_probs=270.9
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+++...++.....+++||+||.++++++|++|+++ +++||+|+++++|++++++++|||+++| +++|++
T Consensus 35 a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~pi~ 113 (632)
T PRK07529 35 AARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG-IANPIN 113 (632)
T ss_pred HHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEeCC
Confidence 47899999999753322223446999999999999999999999 9999999999999999999999999999 569999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCce--EEecCCCCCCCC-C---------CCCCCcch
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKA--IVLPAIGNDVGI-P---------LREQDLSW 332 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~--~vv~~~~~~~~~-~---------~~~~~~~~ 332 (551)
|.++++++.+++++++++++|+++.+... ...+....+....+... +.+......... . ...+..+|
T Consensus 114 ~~~~~~~i~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (632)
T PRK07529 114 PLLEPEQIAELLRAAGAKVLVTLGPFPGT-DIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRKAHARILDF 192 (632)
T ss_pred CcCCHHHHHHHHHhcCCcEEEEeCCCCCc-hHHHHHHHHHhcCCcceeEEEecCcccccccccccccccccccccccCCH
Confidence 99999999999999999999998754210 01111111222222222 222211100000 0 11123456
Q ss_pred HHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh
Q 008848 333 KDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP 412 (551)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 412 (551)
.+.+..... ..........++++++|+|||||||.||||+++|+++++........+++++++++++..|++|..+.
T Consensus 193 ~~~~~~~~~---~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 269 (632)
T PRK07529 193 DAELARQPG---DRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGLPLFHVNAL 269 (632)
T ss_pred HHHHhcCCC---ccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEecCchhhhHH
Confidence 555544322 11111223467899999999999999999999999998887766667788999999999999998886
Q ss_pred H-HHHHHHHhCCEEEEecCC-C-C---hhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChh
Q 008848 413 V-ILFSSFLNGATLALYQGS-P-L---ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (551)
Q Consensus 413 ~-~~~~~l~~G~~lvl~~~~-~-~---~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~ 486 (551)
. .++.++..|+++++.+.. + + ...+++.|+++++|++.++|+++..|++... ...++++||.+++||++++++
T Consensus 270 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr~v~~gg~~l~~~ 348 (632)
T PRK07529 270 LVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLRYALCGAAPLPVE 348 (632)
T ss_pred HHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceEEEEEcCCCCCHH
Confidence 4 578899999999997531 2 2 2578899999999999999999999987642 234689999999999999999
Q ss_pred hHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEE--ECCCC---CccCCCC
Q 008848 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVI--LDECG---VPYVRTF 550 (551)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~I--lD~~g---~~vp~Gv 550 (551)
+.+++++.++ ++++|.||+||++..+...........+++|+|+|+++++| +|++| +++|+|.
T Consensus 349 l~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~ 416 (632)
T PRK07529 349 VFRRFEAATG-VRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDE 416 (632)
T ss_pred HHHHHHHHhC-CcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCC
Confidence 9999988775 89999999999986544433333346789999999999988 47778 8888874
No 32
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=6.7e-44 Score=385.71 Aligned_cols=350 Identities=18% Similarity=0.173 Sum_probs=272.9
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++.+|+++|+++.+. ..+.++.+||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 34 a~~~p~~~A~~~~~~--~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 34 VASCPDKTAVTAVRL--GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLM 111 (547)
T ss_pred HHHCCCceEEEecCC--CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEeccc
Confidence 367899999998652 123446999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC--ceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
|.++.+++.+++++++++++++++.+.. .+......++....+. .++++... +..++.++.......
T Consensus 112 ~~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 180 (547)
T PRK13295 112 PIFRERELSFMLKHAESKVLVVPKTFRG-FDHAAMARRLRPELPALRHVVVVGGD----------GADSFEALLITPAWE 180 (547)
T ss_pred cccCHHHHHHHHHhcCceEEEEeccccC-cchHHHHHHHhhhCCCcceEEEecCC----------CccCHHHHhhCCccc
Confidence 9999999999999999999999875421 0011111122222221 12222111 122344443221110
Q ss_pred ---CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHH
Q 008848 343 ---PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (551)
Q Consensus 343 ---~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (551)
............++++++|+|||||||.||||+++|++++..+......+++++++++++..|++|..+. +.++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~ 260 (547)
T PRK13295 181 QEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMP 260 (547)
T ss_pred cccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHH
Confidence 0000111223456899999999999999999999999998888777777889999999999999998875 568899
Q ss_pred HHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCC
Q 008848 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (551)
Q Consensus 419 l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (551)
+..|+++++.+ ..++..+++.++++++|++.++|+++..|.........++++||.+++||+++++++.+++++.+ ++
T Consensus 261 l~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~ 338 (547)
T PRK13295 261 VMLGATAVLQD-IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GA 338 (547)
T ss_pred HHcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CC
Confidence 99999999876 56889999999999999999999999999876544556788999999999999999999998877 48
Q ss_pred ceeccccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 499 AIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+++|.||+||++..++..... ......++|+|++|++++|+|++++++|.|.
T Consensus 339 ~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~ 391 (547)
T PRK13295 339 KIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQ 391 (547)
T ss_pred CeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCC
Confidence 999999999997643332211 1223468999999999999999999999874
No 33
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-44 Score=399.23 Aligned_cols=318 Identities=15% Similarity=0.145 Sum_probs=258.4
Q ss_pred CCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC
Q 008848 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (551)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~ 266 (551)
.+||++|+++ +. .+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++|.
T Consensus 18 ~~pd~~a~~~-~~--------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~ 88 (705)
T PRK06060 18 GWYDRPAFYA-AD--------VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPE 88 (705)
T ss_pred cCCCceEEEe-cC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCC
Confidence 3799999986 33 799999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCC
Q 008848 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (551)
Q Consensus 267 ~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (551)
++.+++.+++++++++++|++..... .+.. . .++ ...++...... ..
T Consensus 89 ~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~----~-~~~----------------~~~~~~~~~~~---~~ 135 (705)
T PRK06060 89 LHRDDHALAARNTEPALVVTSDALRD---------RFQP----S-RVA----------------EAAELMSEAAR---VA 135 (705)
T ss_pred CCHHHHHHHHhcCCCcEEEEchHHhh---------hhcc----c-ccc----------------hhhhhhhhccc---cC
Confidence 99999999999999999999875321 0000 0 000 01111111000 00
Q ss_pred CCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh-hhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCE
Q 008848 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW-AHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (551)
Q Consensus 347 ~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~ 424 (551)
........++++|||+|||||||+||||+++|+++.+.+.+.. ..++++++|++++..+++|+.++ ..++.+|..|++
T Consensus 136 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~ 215 (705)
T PRK06060 136 PGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGS 215 (705)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCE
Confidence 0011233568899999999999999999999999988776553 45788899999999999998886 567889999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccc
Q 008848 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (551)
Q Consensus 425 lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (551)
+++.+...++..+...++++++|+++++|+++..+++... ..++++||.+++|||++++++.+++.+.+++++++|.|
T Consensus 216 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~Y 293 (705)
T PRK06060 216 AVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGI 293 (705)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeee
Confidence 9998755677888999999999999999999999886532 33578999999999999999999998888778999999
Q ss_pred cccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|+||++..+... .......+++|+|++|++++|+|++|+++|+|.
T Consensus 294 G~tE~~~~~~~~-~~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~ 338 (705)
T PRK06060 294 GSTEVGQTFVSN-RVDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGV 338 (705)
T ss_pred eccccCceEEec-cCCCCCcCcccccCCCcEEEEECCCCCCCCCCC
Confidence 999997543322 222335678999999999999999999999985
No 34
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-44 Score=395.48 Aligned_cols=338 Identities=15% Similarity=0.148 Sum_probs=251.6
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHh---h-cCCC-----------CEEEEEcCCCHHHHHH
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT---M-FSKG-----------DAIAIDMPMTVRAVII 249 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~---~-v~~g-----------d~V~i~~~~~~e~vva 249 (551)
+++++|+++|+++... ...++.+||+||.++++++|++|.+ + +++| |+|+|+++|+++|+++
T Consensus 70 ~~~~~p~~~Al~~~~~---g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~ 146 (746)
T PTZ00342 70 KYKLNNNKIAIVEHSC---GEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVA 146 (746)
T ss_pred HHhhcCCceeEeccCC---CCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHH
Confidence 4578999999986422 1235699999999999999999996 6 9998 9999999999999999
Q ss_pred HHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC--ceEEecCCCCCC------
Q 008848 250 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDV------ 321 (551)
Q Consensus 250 ~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~vv~~~~~~~------ 321 (551)
++||+++|++.||+++.++++++.++|+++++++|+++.... +.+..+....+. .+++++......
T Consensus 147 ~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~ 220 (746)
T PTZ00342 147 DLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLV------EGLLERKNELPHLKKLIILDTLIKSKEININK 220 (746)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHH------HHHHHhhccCCCceEEEEECCCCccccccccc
Confidence 999999999999999999999999999999999999976432 222222222332 233332211000
Q ss_pred ------------CC-CC-----------------------------------------CCCCcchHHhhccCCCCCCCCC
Q 008848 322 ------------GI-PL-----------------------------------------REQDLSWKDFLSSVDYHPRPNY 347 (551)
Q Consensus 322 ------------~~-~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 347 (551)
.. .. ......|+++..... ..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~ 295 (746)
T PTZ00342 221 EEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT-----TN 295 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc-----cC
Confidence 00 00 000011122211110 01
Q ss_pred CCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhc--CCCCCCEEEEecCcccchhhHHHHHHHHhCCEE
Q 008848 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (551)
Q Consensus 348 ~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~l 425 (551)
.......++|+|+|+|||||||.|||||+||+|+++.+....... ...+.+++++++|++|.++....+.+++.|+++
T Consensus 296 ~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i 375 (746)
T PTZ00342 296 YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTI 375 (746)
T ss_pred CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEE
Confidence 122334679999999999999999999999999988776543321 223568999999999999987677889999999
Q ss_pred EEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhc--------CccCC------------------------------
Q 008848 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NCLEG------------------------------ 467 (551)
Q Consensus 426 vl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~--------~~~~~------------------------------ 467 (551)
++.++ ++..+++.|+++++|++.++|++++.|.+. .....
T Consensus 376 ~~~~~--~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~ 453 (746)
T PTZ00342 376 NIWSK--DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISS 453 (746)
T ss_pred EEeCC--CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 99863 678999999999999999999999988652 10000
Q ss_pred ----CCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCC-CCceEEEEC
Q 008848 468 ----LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILD 540 (551)
Q Consensus 468 ----~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~g~~v~IlD 540 (551)
.-.++||.+++||+++++++.+++...++ ++++++||+||+++..+...+ .....+++|+|+ ||++++|+|
T Consensus 454 kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g-~~i~~gYGlTEt~~~~~~~~~-~~~~~gsvG~p~~pg~e~ki~d 529 (746)
T PTZ00342 454 KIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN-VNYYQGYGLTETTGPIFVQHA-DDNNTESIGGPISPNTKYKVRT 529 (746)
T ss_pred HHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC-CCEEEeeccCcccceeeeccC-CCCCcccccCcCCCcEEEEEec
Confidence 00268999999999999999999987765 899999999999765443332 334678999998 999999998
No 35
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=5.8e-44 Score=387.34 Aligned_cols=339 Identities=17% Similarity=0.089 Sum_probs=258.8
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+++|+++.++ ++||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 16 ~~~~~p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl 87 (563)
T PLN02860 16 LATLRGNAVVTISGNR--------RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPL 87 (563)
T ss_pred HHHhcCCceEEecCCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeC
Confidence 4578999999997665 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHh-hcCCCc-eEEecCCCCCCCCCCCCCCcchHHhhccCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL-GAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (551)
+|.++.+++.+++++++++++++++... .....+. ...+.. ..++.................++++......
T Consensus 88 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PLN02860 88 NYRWSFEEAKSAMLLVRPVMLVTDETCS------SWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG 161 (563)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecccc------hHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccc
Confidence 9999999999999999999999987531 1111111 111111 1121111000000000001111111111000
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHh
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (551)
.........++++++|+|||||||.||||+++|++++.........++++++|++++..|++|+.++..++.+++.
T Consensus 162 ----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~ 237 (563)
T PLN02860 162 ----TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMV 237 (563)
T ss_pred ----cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHHHHHHc
Confidence 0001112356899999999999999999999999998776666567889999999999999999998888899999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCcc--CCCCCCCccEEEeecCCCChhhHHHHHHhccCCc
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (551)
|+++++.+ .+++..+++.|+++++|++.++|+++..|++.... ...++++||.+++||+++++++.+++.+.+++.+
T Consensus 238 G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~ 316 (563)
T PLN02860 238 GACHVLLP-KFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAK 316 (563)
T ss_pred CceEEecC-CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCc
Confidence 99999976 57889999999999999999999999999865322 2245789999999999999999999998887789
Q ss_pred eeccccccccccccccCCcCC----------------------CCCcCccCCCCCCceEEEECCC
Q 008848 500 IIESCGGTELSSAYIQGSLLQ----------------------PQAFGAFSTATMTAGLVILDEC 542 (551)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----------------------~~~~~~iG~p~~g~~v~IlD~~ 542 (551)
++|.||+||++..++...... .....++|+|++|++++|+|++
T Consensus 317 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~ 381 (563)
T PLN02860 317 LFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE 381 (563)
T ss_pred eecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC
Confidence 999999999875433221111 0112479999999999999854
No 36
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-43 Score=375.04 Aligned_cols=344 Identities=24% Similarity=0.245 Sum_probs=276.9
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+|+++|+.+.+. ++||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 14 ~~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l 85 (513)
T PRK07656 14 AARRFGDKEAYVFGDQ--------RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPL 85 (513)
T ss_pred HHHHCCCCeEEEeCCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEec
Confidence 3467899999999776 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
++.++.+++..++++++++++++++... ............ ..+++...... ........+|+++......
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~- 156 (513)
T PRK07656 86 NTRYTADEAAYILARGDAKALFVLGLFL------GVDYSATTRLPALEHVVICETEED--DPHTEKMKTFTDFLAAGDP- 156 (513)
T ss_pred CcccCHHHHHHHHhhcCceEEEEchhhH------HHHHHHHhccCCccEEEEEcCccc--ccCccccccHHHHHhcCCC-
Confidence 9999999999999999999999987532 111112122222 12222111110 0001122456666543321
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhH-HHHHHHHh
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~~ 421 (551)
........++++++|+|||||||.||||.++|+++.+.+......+++++++++++..|++|++++. .++.++..
T Consensus 157 ----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (513)
T PRK07656 157 ----AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMR 232 (513)
T ss_pred ----CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHc
Confidence 1122345678999999999999999999999999988888777788999999999999999998874 47889999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.+.++..+++
T Consensus 233 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~ 311 (513)
T PRK07656 233 GATILPLP-VFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVL 311 (513)
T ss_pred CceEEecC-cCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceE
Confidence 99998865 56789999999999999999999999999887655555788999999999999999999998888733899
Q ss_pred ccccccccccccccCCcCCCC--CcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQ--AFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~--~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|.||+||+++..+.+...... ..+++|+|++|++++|+|++++++|.|.
T Consensus 312 ~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~ 362 (513)
T PRK07656 312 TGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGE 362 (513)
T ss_pred eEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCC
Confidence 999999997655444332222 2678999999999999999999999874
No 37
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.1e-43 Score=372.72 Aligned_cols=339 Identities=22% Similarity=0.186 Sum_probs=255.6
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+|+.+|+.+... +.++.+||+|+.+++.++|++|++. +..||+|+|++.|+++|+++.+||+.+|++.||+
T Consensus 25 ~~~~~~~~~a~~~~~~----~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~ 100 (613)
T COG1022 25 RVKDRPDGVALMYKEL----GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPI 100 (613)
T ss_pred HhhcCCcceeEeeecC----CcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEec
Confidence 4578888889987764 6888999999999999999999999 9779999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc---eEEecC-CCCCCCCCC------CCCCcchH
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK---AIVLPA-IGNDVGIPL------REQDLSWK 333 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~---~~vv~~-~~~~~~~~~------~~~~~~~~ 333 (551)
++..++++++++|+++++++|+++... ..+....+....+.. ...+.. ......... ..+...+
T Consensus 101 y~t~~~~~~~~iL~~se~~~i~~e~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (613)
T COG1022 101 YSTSTPEQLAYILNESESKVIFVENQE-----LLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF- 174 (613)
T ss_pred CCCCCHHHHHHHHhcCCceEEEecchH-----HHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh-
Confidence 999999999999999999999999752 112222222221110 000000 000000000 0000111
Q ss_pred HhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC-CCCCCEEEEecCcccchhh
Q 008848 334 DFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGP 412 (551)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~ 412 (551)
.+ ... .......+..+||+|.|+|||||||+|||||++|+|++..+........ ++++|++++++|++|.+..
T Consensus 175 ~~-~~~-----~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er 248 (613)
T COG1022 175 LI-DSA-----GLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFER 248 (613)
T ss_pred hh-ccc-----ccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHH
Confidence 01 110 0111223567899999999999999999999999999999999988886 9999999999999999887
Q ss_pred HH-HHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhc--------Cc-------------------
Q 008848 413 VI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NC------------------- 464 (551)
Q Consensus 413 ~~-~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~--------~~------------------- 464 (551)
.. ....+..|++... ..++..+++.+++.++|++.++|.+|+.+.+. ..
T Consensus 249 ~~~~~~~~~~g~~~~~---~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~ 325 (613)
T COG1022 249 AFEGGLALYGGVTVLF---KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISR 325 (613)
T ss_pred HHHHHHHhhcceEEEe---cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh
Confidence 64 4444555544444 34778999999999999999999999887542 00
Q ss_pred ----------------------cCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCC
Q 008848 465 ----------------------LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQ 522 (551)
Q Consensus 465 ----------------------~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~ 522 (551)
..... .++|++++||+++++++..+++.. ++++.++||+|||+..++... ....
T Consensus 326 ~~~~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~-~~~~ 401 (613)
T COG1022 326 ALLGGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNP-PDRF 401 (613)
T ss_pred hhcccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEcc-ccCc
Confidence 00111 478999999999999999988866 489999999999987655443 3456
Q ss_pred CcCccCCCCCCceEEEECCCCCccC
Q 008848 523 AFGAFSTATMTAGLVILDECGVPYV 547 (551)
Q Consensus 523 ~~~~iG~p~~g~~v~IlD~~g~~vp 547 (551)
..+++|+|+|+++++|.| +|+.+=
T Consensus 402 ~~gtvG~p~p~~evKI~d-~GEilV 425 (613)
T COG1022 402 VLGTVGKPLPGIEVKIAD-DGEILV 425 (613)
T ss_pred ccCCcCCcCCCceEEEcc-CceEEE
Confidence 778999999999999998 666543
No 38
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-43 Score=374.57 Aligned_cols=323 Identities=21% Similarity=0.241 Sum_probs=261.9
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+++++||++|+++.+. ++||+||.++++++|++|.+...+|++|+|+++|++++++++|||+++|++++|++
T Consensus 10 ~a~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 81 (487)
T PRK07638 10 HASLQPNKIAIKENDR--------VLTYKDWFESVCKVANWLNEKESKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLD 81 (487)
T ss_pred HHHhCCCCeEEecCCc--------EeeHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecC
Confidence 3478999999998776 99999999999999999998833899999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
+.++.+++.++++.+++++++++...... +. . ....++.+. .+.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~------~~---~-~~~~~~~~~---------------~~~~~~~~~~~--- 133 (487)
T PRK07638 82 IKWKQDELKERLAISNADMIVTERYKLND------LP---D-EEGRVIEID---------------EWKRMIEKYLP--- 133 (487)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEecccccc------hh---h-ccceEEEeh---------------hhhhhhhhccc---
Confidence 99999999999999999999998753211 00 0 001111111 11111111110
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCE
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (551)
.........+++++|+|||||||.||||+++|++++..+......++++++|+++...++.|+.+++.++.++..|++
T Consensus 134 --~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~ 211 (487)
T PRK07638 134 --TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQT 211 (487)
T ss_pred --cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcE
Confidence 011112234678999999999999999999999998888777777889999999999999999888888899999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccc
Q 008848 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (551)
Q Consensus 425 lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (551)
+++.+ .+++..+++.|+++++|++.++|+++..|.+... . ..+.+.++++|++++.++.+++...+++++++|.|
T Consensus 212 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~Y 286 (487)
T PRK07638 212 VHLMR-KFIPNQVLDKLETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFY 286 (487)
T ss_pred EEEcC-CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEe
Confidence 99876 5788999999999999999999999999987632 2 34556678899999999999999988888999999
Q ss_pred cccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|+||++..+...........+++|+|++|++++|+|++|+++|+|.
T Consensus 287 G~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~ 332 (487)
T PRK07638 287 GASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGE 332 (487)
T ss_pred cCCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCC
Confidence 9999986544433223345679999999999999999999999884
No 39
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=3.8e-44 Score=374.58 Aligned_cols=336 Identities=24% Similarity=0.227 Sum_probs=256.5
Q ss_pred cCCCCCCceEEEE-ecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVW-REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~-~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
+|+++||++|+++ ... ++||+||+++++++|..|++. +++||+|+|+++|+++++++++||+++|++++|
T Consensus 4 ~a~~~pd~~a~~~~~~~--------~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~ 75 (417)
T PF00501_consen 4 QAQRYPDRIALIDDEGR--------SLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVP 75 (417)
T ss_dssp HHHHSTTSEEEEETTTE--------EEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEE
T ss_pred HHhhCCCceEEEECCCE--------EEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccc
Confidence 4688999999999 444 999999999999999999988 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHh---hcCCC--ceEEecCCCCCCCCCCCCCCcchHHhhc
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL---GAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~---~~~~~--~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 337 (551)
++|.++.+++.++++.+++++||+ .+.. +... ..++. ..... .+.++..... ...+.+..
T Consensus 76 l~~~~~~~~~~~~l~~~~~~~ii~-~~~~---d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 140 (417)
T PF00501_consen 76 LDPSLSEDELRHILRQSGPKVIIT-SEAV---DSEP-LKKLKSIFKQEDPSSSIIILDRDDL----------PKKEALKS 140 (417)
T ss_dssp EETTSSHHHHHHHHHHHTESEEEE-CHHH---SCHH-HHHHHHHHTTSTTTEEEEEESHSSC----------TTCHHHHH
T ss_pred cccccccccccccccccceeEEEE-eccc---cccc-cccchhhhccccccccccccccccc----------cccccccc
Confidence 999999999999999999999997 1000 0111 22222 11111 2333322111 00111111
Q ss_pred cCCCCCCCCCCCCCC-CCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh--hhcCCCCCCEEEEecCcccchhh-H
Q 008848 338 SVDYHPRPNYYSPVY-NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW--AHIDLKVGDVYCWPTNLGWVMGP-V 413 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~-~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~-~ 413 (551)
.... .....+ ..++++++|+|||||||.||+|+++|+++.+.+.... ...+++ |++++..|++|..++ .
T Consensus 141 ~~~~-----~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~ 213 (417)
T PF00501_consen 141 ASLS-----DEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLIS 213 (417)
T ss_dssp HHHC-----HCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHH
T ss_pred cccc-----cccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccc
Confidence 1000 000000 0468999999999999999999999999988877653 223333 699999999999999 7
Q ss_pred HHHHHHHhCCEEEEecCCC--ChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccC----CCCCCCccEEEeecCCCChhh
Q 008848 414 ILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE----GLDWTKIRSFASTGETSNVDD 487 (551)
Q Consensus 414 ~~~~~l~~G~~lvl~~~~~--~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~----~~~l~sLr~i~~gGe~l~~~~ 487 (551)
.++.++..|+++++++... ++..+++.|+++++|++.++|++++.|++..... ..++++||.+++||+++++++
T Consensus 214 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~ 293 (417)
T PF00501_consen 214 ALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDL 293 (417)
T ss_dssp HHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHH
T ss_pred cccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhh
Confidence 8999999999999988432 2466899999999999999999999998743221 347889999999999999999
Q ss_pred HHHHHHhccCCceeccccccccccccccCC-cCCCCCcCccCCCCCCceEEEECCC-CCccCCCC
Q 008848 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGS-LLQPQAFGAFSTATMTAGLVILDEC-GVPYVRTF 550 (551)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~-~~~~~~~~~iG~p~~g~~v~IlD~~-g~~vp~Gv 550 (551)
.+++++.++..++++.||+||++..++... .......+++|+|++|++++|+|++ ++++|+|.
T Consensus 294 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~ 358 (417)
T PF00501_consen 294 LRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGE 358 (417)
T ss_dssp HHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTS
T ss_pred ccccccccccccceecccccccceeeecccccccccccccccccccccccccccccccccccccc
Confidence 999999887558999999999987654332 1222356789999999999999988 99999874
No 40
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1e-42 Score=375.75 Aligned_cols=339 Identities=20% Similarity=0.204 Sum_probs=268.1
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+++.+. .+++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 33 ~~~~~~~~a~~~~~~------~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 106 (537)
T PLN02246 33 LSEFSDRPCLIDGAT------GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTAN 106 (537)
T ss_pred HHhCCCCeEEEecCC------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCC
Confidence 357899999987532 13899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
|.++.+++..++++++++++|+++... ..+..+.......++.+.... .....+.++......
T Consensus 107 ~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~--- 169 (537)
T PLN02246 107 PFYTPAEIAKQAKASGAKLIITQSCYV------DKLKGLAEDDGVTVVTIDDPP--------EGCLHFSELTQADEN--- 169 (537)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEccchH------HHHHHHhhcCCceEEEeCCCC--------CCceeHHHHhcCCCC---
Confidence 999999999999999999999987532 111222111111222222110 122334444332211
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh----hcCCCCCCEEEEecCcccchhhH-HHHHHH
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPV-ILFSSF 419 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l 419 (551)
..+.....++++++++|||||||.||||+++|+++++.+.+... .+.++++|++++..|++|..++. .++.++
T Consensus 170 --~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l 247 (537)
T PLN02246 170 --ELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGL 247 (537)
T ss_pred --CCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHH
Confidence 11223446789999999999999999999999999877654432 46788999999999999998874 467789
Q ss_pred HhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCc
Q 008848 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (551)
Q Consensus 420 ~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (551)
..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++++.+++..
T Consensus 248 ~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~ 326 (537)
T PLN02246 248 RVGAAILIMP-KFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAV 326 (537)
T ss_pred hcCCEEEEeC-CCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCe
Confidence 9999999986 467889999999999999999999999998765444556889999999999999999999999887788
Q ss_pred eeccccccccccccccCCc----CCCCCcCccCCCCCCceEEEEC-CCCCccCCCC
Q 008848 500 IIESCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~Gv 550 (551)
+++.||+||++.+++.... ......+++|+|++|++++|+| ++++++|+|.
T Consensus 327 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~ 382 (537)
T PLN02246 327 LGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQ 382 (537)
T ss_pred EeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCC
Confidence 9999999998764332211 1123457899999999999999 5789999874
No 41
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=5e-43 Score=383.47 Aligned_cols=341 Identities=16% Similarity=0.106 Sum_probs=255.5
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+++|+++.+. .+.++++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 48 ~a~~~p~~~a~~~~~~---~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl 124 (614)
T PRK08180 48 WAQEAPDRVFLAERGA---DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPV 124 (614)
T ss_pred HHHHCCCCceeeeccC---CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeee
Confidence 3478999999987532 12356899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCC-----HHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhcc
Q 008848 264 ADSFA-----AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (551)
Q Consensus 264 ~~~~~-----~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~ 338 (551)
+|.++ .+++.+++++++++++|+++... ....+.... ......++... .. ......+|+++...
T Consensus 125 ~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~----~~~~~~~~~-~~~~~~i~~~~-~~-----~~~~~~~~~~~~~~ 193 (614)
T PRK08180 125 SPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA----FARALAAVV-PADVEVVAVRG-AV-----PGRAATPFAALLAT 193 (614)
T ss_pred ccccccccCCHHHHHHHHhcCCCcEEEEcCHHH----HHHHHhhhc-cCCceEEEecC-CC-----CCcccccHHHHhcc
Confidence 99998 79999999999999999975310 000000000 00111222211 00 00112456666543
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCC--CCCEEEEecCcccchhh-HHH
Q 008848 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK--VGDVYCWPTNLGWVMGP-VIL 415 (551)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~-~~~ 415 (551)
... ...........++++++|+|||||||.||||+++|++++..+......+++. .++++++++|++|..+. +.+
T Consensus 194 ~~~--~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~ 271 (614)
T PRK08180 194 PPT--AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNL 271 (614)
T ss_pred ccc--cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHH
Confidence 211 0001111234578999999999999999999999999988777665556653 56899999999998886 457
Q ss_pred HHHHHhCCEEEEecCCCCh---hhHHHHHHHcCCcEEEecHHHHHHHHhcC----ccCCCCCCCccEEEeecCCCChhhH
Q 008848 416 FSSFLNGATLALYQGSPLE---RSFGKFVQDAGVTVLGTVPSLVKAWRNTN----CLEGLDWTKIRSFASTGETSNVDDD 488 (551)
Q Consensus 416 ~~~l~~G~~lvl~~~~~~~---~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~----~~~~~~l~sLr~i~~gGe~l~~~~~ 488 (551)
+.+++.|+++++.++.+++ ..+++.|+++++|++.++|+++..|++.. .....++++||.+++||+++++++.
T Consensus 272 ~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~ 351 (614)
T PRK08180 272 GIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVW 351 (614)
T ss_pred HHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHH
Confidence 7899999999997644443 46788899999999999999999887632 1123457899999999999999998
Q ss_pred HHHHHh----cc-CCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCC
Q 008848 489 LWLSSK----AW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC 542 (551)
Q Consensus 489 ~~~~~~----~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~ 542 (551)
+++.+. ++ ++++++.||+||++..++.... .....+++|+|++|++++|+|++
T Consensus 352 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~d~~ 409 (614)
T PRK08180 352 DRLDRVAEATCGERIRMMTGLGMTETAPSATFTTG-PLSRAGNIGLPAPGCEVKLVPVG 409 (614)
T ss_pred HHHHHHHHhhcCCCceeeeeecccccCCceEeccc-ccCCCCcccCccCCcEEEEecCC
Confidence 888764 22 3679999999999754433222 23456899999999999999864
No 42
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.6e-42 Score=372.45 Aligned_cols=341 Identities=21% Similarity=0.201 Sum_probs=273.6
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+.+.++ ++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 10 ~~~~p~~~a~~~~~~--------~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~ 81 (515)
T TIGR03098 10 AARLPDATALVHHDR--------TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPIN 81 (515)
T ss_pred HHHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCC
Confidence 367999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC--ceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
+.++.+++..+++++++++++++.... +.+......... ..+.+..... ..........|+++......
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~- 152 (515)
T TIGR03098 82 PLLKAEQVAHILADCNVRLLVTSSERL------DLLHPALPGCHDLRTLILVGEPAH--ASEGGGESPSWPKLLALGDA- 152 (515)
T ss_pred CCCCHHHHHHHHHcCCCeEEEEccchh------hhhHhhhhcccccceEEEecCccc--ccCCccccccHHHhhccccc-
Confidence 999999999999999999999986432 111122112111 2222221111 00111233456665443221
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhC
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (551)
........+++++|+|||||||.||||+++|+++...+......+.+.++|++++..|++|+.++..++.++..|
T Consensus 153 -----~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G 227 (515)
T TIGR03098 153 -----DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVG 227 (515)
T ss_pred -----cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcC
Confidence 112233457899999999999999999999999988887777778899999999999999999988889999999
Q ss_pred CEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceec
Q 008848 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (551)
Q Consensus 423 ~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (551)
+++++.+ ..++..+++.++++++|++.++|+++..|.+... ...+++++|.+++||+++++++.+.+++.+++..+++
T Consensus 228 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~ 305 (515)
T TIGR03098 228 ATVVLHD-YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFL 305 (515)
T ss_pred CEEEEcC-CCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEee
Confidence 9999876 4688999999999999999999999999886432 2235789999999999999999999998887788999
Q ss_pred cccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
.||+||++..+...........+++|+|++|++++|+|++|+++|.|.
T Consensus 306 ~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~ 353 (515)
T TIGR03098 306 MYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGE 353 (515)
T ss_pred eeccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCC
Confidence 999999875433222222345679999999999999999999998763
No 43
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-43 Score=389.34 Aligned_cols=344 Identities=17% Similarity=0.165 Sum_probs=248.9
Q ss_pred cCCCCCCceEEEEecC-----------CCC--------CCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 008848 185 HRRKEDNTVAIVWRED-----------RCD--------ESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~-----------~~~--------~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~ 244 (551)
+++++||++|+.+... .+. .+.++++||+||+++++++|++|+++ +++||+|+|+++|++
T Consensus 78 ~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 157 (700)
T PTZ00216 78 ICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW 157 (700)
T ss_pred HHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH
Confidence 4589999999998521 000 12467999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhc--CCC-ceEEecCCCCCC
Q 008848 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--APL-KAIVLPAIGNDV 321 (551)
Q Consensus 245 e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~--~~~-~~~vv~~~~~~~ 321 (551)
||++++|||+++|++++|+++.++++++.+++++++++++|++.... ..+...... .+. .++++......
T Consensus 158 e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~~~~~ii~~~~~~~~- 230 (700)
T PTZ00216 158 EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV------PNLLRLMKSGGMPNTTIIYLDSLPAS- 230 (700)
T ss_pred HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH------HHHHHhhhhccCCceEEEEECCCccc-
Confidence 99999999999999999999999999999999999999999986421 111111111 111 22222211100
Q ss_pred CCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhc-----CCCC
Q 008848 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-----DLKV 396 (551)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~ 396 (551)
.........+|++++...... ...........++|++||+|||||||.||||+++|+|+++.+.+....+ .+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 309 (700)
T PTZ00216 231 VDTEGCRLVAWTDVVAKGHSA-GSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEE 309 (700)
T ss_pred cccCCceEEEHHHHHHhCCcc-ccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCC
Confidence 000111345677776544210 0011112334679999999999999999999999999988776654332 2478
Q ss_pred CCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHH-------HHHHcCCcEEEecHHHHHHHHhcCcc----
Q 008848 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK-------FVQDAGVTVLGTVPSLVKAWRNTNCL---- 465 (551)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~-------~i~~~~vt~l~~~Ps~l~~l~~~~~~---- 465 (551)
+|++++++|++|.++.......++.|+++++. ++..+.+ .++++++|++.++|++++.+.+....
T Consensus 310 ~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~----~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~ 385 (700)
T PTZ00216 310 DETYCSYLPLAHIMEFGVTNIFLARGALIGFG----SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPP 385 (700)
T ss_pred CCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC----CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhc
Confidence 89999999999988865445557777776652 2334433 68999999999999999887642100
Q ss_pred ---------------------CCC----------------CCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccc
Q 008848 466 ---------------------EGL----------------DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (551)
Q Consensus 466 ---------------------~~~----------------~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (551)
... ..+++|.+++||+++++++.++++..++ +++|+||+||
T Consensus 386 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~--~l~~~YG~TE 463 (700)
T PTZ00216 386 VGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG--MVIQGWGLTE 463 (700)
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh--hHhhccCccc
Confidence 000 0157999999999999999887766554 8999999999
Q ss_pred cccccccCCcCCCCCcCccCCCCCCceEEEECCCC
Q 008848 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECG 543 (551)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g 543 (551)
+++..+... ......+++|+|++|++++|+|+++
T Consensus 464 t~~~~~~~~-~~~~~~~svG~p~~g~evkI~d~~~ 497 (700)
T PTZ00216 464 TVCCGGIQR-TGDLEPNAVGQLLKGVEMKLLDTEE 497 (700)
T ss_pred ccccccccC-CCCCCCCCcCCcCCCeEEEEeechh
Confidence 976544332 2234568999999999999999754
No 44
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.9e-42 Score=375.23 Aligned_cols=340 Identities=17% Similarity=0.144 Sum_probs=262.6
Q ss_pred CCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+.+|+++|+++...+ .++||+||+++++++|++|++ . +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 50 ~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 50 HNHNGDTALIDSSTG------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cccCCCCEEEECCCC------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcC
Confidence 468999999975431 279999999999999999999 8 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
|.++.+++.+++++++++++++++... ..+.. ....++.+..... .. ........|.++......
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--- 188 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENV---------EKLSP-LGVPVIGVPENYD-FD-SKRIEFPKFYELIKEDFD--- 188 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHH---------HHHHh-cCCcEEecCcccc-cc-cCccCcccHHHHhhcCCc---
Confidence 999999999999999999999987531 11111 1111222211000 00 000122345554433221
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh----hcC-CCCCCEEEEecCcccchhhH-HHHHH
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HID-LKVGDVYCWPTNLGWVMGPV-ILFSS 418 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~-~~~~d~~l~~~~~~~~~~~~-~~~~~ 418 (551)
........++++++|+|||||||.||||+++|++++..+..... .+. ....++++..+|++|..++. .++.+
T Consensus 189 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 266 (560)
T PLN02574 189 --FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGL 266 (560)
T ss_pred --ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHH
Confidence 11122345689999999999999999999999999877654432 122 23567889999999998874 45677
Q ss_pred HHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCcc-CCCCCCCccEEEeecCCCChhhHHHHHHhccC
Q 008848 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-EGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (551)
Q Consensus 419 l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~-~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~ 497 (551)
+..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+.... ...+++++|.+++||+++++++.+++.+.+++
T Consensus 267 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~ 345 (560)
T PLN02574 267 LSLGSTIVVMR-RFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPH 345 (560)
T ss_pred HhcCCEEEEec-CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCC
Confidence 88999999876 57889999999999999999999999999876432 34568899999999999999999999888877
Q ss_pred CceeccccccccccccccCCc-CCCCCcCccCCCCCCceEEEEC-CCCCccCCCC
Q 008848 498 NAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~Gv 550 (551)
+++++.||+||++...+.... ......+++|+|++|++++|+| ++|+++|+|.
T Consensus 346 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~ 400 (560)
T PLN02574 346 VDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGN 400 (560)
T ss_pred CcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCC
Confidence 899999999999754332221 1224567899999999999999 7899999885
No 45
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3e-42 Score=372.22 Aligned_cols=350 Identities=18% Similarity=0.170 Sum_probs=268.9
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++.+|+++|+++.+. ..+..+.+||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 32 ~~~~p~~~a~~~~~~--~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 109 (538)
T TIGR03208 32 VANCPDKPALTAYRD--GHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLM 109 (538)
T ss_pred HHHCCCceEEEeecc--cCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccC
Confidence 467899999986422 112345899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC--ceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
|.++.+++.+++++++++++++++.+.. ..............+. .++++... ....+++++......
T Consensus 110 ~~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 178 (538)
T TIGR03208 110 PIFRERELSFMLNHADSKVFVVPSVFRG-FDHAAMARELQSKLPALRQVVVIDGD----------GDDSFDRVLMTPERD 178 (538)
T ss_pred cccCHHHHHHHHHhcCCeEEEEcccccc-ccHHHHHHHHhccCCcceEEEEecCC----------CCcCHHHHhhccccc
Confidence 9999999999999999999999875420 0011111111122221 12222111 112344333211100
Q ss_pred CCCC---CCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHH
Q 008848 343 PRPN---YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (551)
Q Consensus 343 ~~~~---~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (551)
.... ........++++++|+|||||||.||||+++|++++..+......++++.+|++++.+|++|..+. +.++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~ 258 (538)
T TIGR03208 179 DTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMP 258 (538)
T ss_pred cccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHH
Confidence 0000 011123457899999999999999999999999999888877777888999999999999998876 568889
Q ss_pred HHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCC
Q 008848 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (551)
Q Consensus 419 l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (551)
++.|+++++.+ .+++..+++.|+++++|++.++|+++..+.........+++++|.+++||+++++++.+++.+.++ +
T Consensus 259 l~~g~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~-~ 336 (538)
T TIGR03208 259 LILNATAVLQD-IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELLG-A 336 (538)
T ss_pred HHcCCEEEecC-ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHcC-C
Confidence 99999999865 568899999999999999999999999887654333456789999999999999999998887775 7
Q ss_pred ceeccccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 499 AIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+++|.||+||++...+..... ......++|+|++|++++|+|++|+++|+|.
T Consensus 337 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~ 389 (538)
T TIGR03208 337 LIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGE 389 (538)
T ss_pred eEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCC
Confidence 899999999987654332211 1122458999999999999999999999874
No 46
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=6.2e-43 Score=386.39 Aligned_cols=347 Identities=17% Similarity=0.140 Sum_probs=253.9
Q ss_pred cCCCCCCceEEEEec----------CC-----CCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHH
Q 008848 185 HRRKEDNTVAIVWRE----------DR-----CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVI 248 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~----------~~-----~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vv 248 (551)
.++++||++|+.+.. .+ ...+.++.+||+||+++++++|++|.++ +++||+|+|+++|++||++
T Consensus 67 ~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~ 146 (696)
T PLN02387 67 SCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLI 146 (696)
T ss_pred HHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH
Confidence 357899999995421 00 0124567799999999999999999999 9999999999999999999
Q ss_pred HHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc--eEEecCCCCCCCC---
Q 008848 249 IYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGI--- 323 (551)
Q Consensus 249 a~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~vv~~~~~~~~~--- 323 (551)
++|||+++|+++||+++.++++++.++|++++++++|++.... ..+..+....+.. +++++........
T Consensus 147 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~ 220 (696)
T PLN02387 147 ALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL------KKLIDISSQLETVKRVIYMDDEGVDSDSSLS 220 (696)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH------HHHHHHhhccCCceEEEEECCCCchhhhhhh
Confidence 9999999999999999999999999999999999999986532 2222222222222 2222211110000
Q ss_pred -CCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhc-CCCCCCEEE
Q 008848 324 -PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYC 401 (551)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l 401 (551)
.......+|+++...... .........++|+++|+|||||||.||||++||+|++..+......+ .++++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l 296 (696)
T PLN02387 221 GSSNWTVSSFSEVEKLGKE----NPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYL 296 (696)
T ss_pred ccCCcEEEEHHHHHHhhcc----CCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEE
Confidence 001112356666544322 01112234579999999999999999999999999988776654443 578999999
Q ss_pred EecCcccchhhHHHHHHHHhCCEEEEecCC-----C--ChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccC--------
Q 008848 402 WPTNLGWVMGPVILFSSFLNGATLALYQGS-----P--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE-------- 466 (551)
Q Consensus 402 ~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~-----~--~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~-------- 466 (551)
+++|++|..+....+..+..|+++.+.... . .+..+++.++++++|++.++|++++.|.+.....
T Consensus 297 ~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~ 376 (696)
T PLN02387 297 AYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLA 376 (696)
T ss_pred EECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHH
Confidence 999999999886655667788887663211 0 1234567899999999999999999886431000
Q ss_pred -----------------------C----------------CCCCCccEEEeecCCCChhhHHHHHHhccCCceecccccc
Q 008848 467 -----------------------G----------------LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (551)
Q Consensus 467 -----------------------~----------------~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (551)
. ...+++|.+++||+++++++.+++...++ ++++++||+|
T Consensus 377 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g-~~v~~~YG~T 455 (696)
T PLN02387 377 KKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLG-APIGQGYGLT 455 (696)
T ss_pred HHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcC-CCeeEeechh
Confidence 0 00158999999999999999887776665 8999999999
Q ss_pred ccccccccCCcCCCCCcCccCCCCCCceEEEEC-CCC
Q 008848 508 ELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECG 543 (551)
Q Consensus 508 E~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD-~~g 543 (551)
|++..++.... .....+++|+|+|+++++|+| +++
T Consensus 456 Et~~~~~~~~~-~~~~~gsvG~p~p~~evkivd~~~~ 491 (696)
T PLN02387 456 ETCAGATFSEW-DDTSVGRVGPPLPCCYVKLVSWEEG 491 (696)
T ss_pred hcccceeecCc-ccCCCCccCCCCCceEEEEeecccc
Confidence 99765444332 234568999999999999998 443
No 47
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-42 Score=373.99 Aligned_cols=345 Identities=19% Similarity=0.164 Sum_probs=262.9
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
++.+|+++|++..++ .+||+||+++++++|++|.+ . +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 34 a~~~p~~~al~~~~~--------~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l 105 (562)
T PRK05677 34 CQRFADKPAFSNLGK--------TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNT 105 (562)
T ss_pred HHhCCCCeeEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeec
Confidence 467899999998665 89999999999999999987 6 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCC-------------------CC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG-------------------IP 324 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-------------------~~ 324 (551)
+|.++.+++.+++++++++++|+++... ....++......+.+++........ ..
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 106 NPLYTAREMEHQFNDSGAKALVCLANMA------HLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred CCCCCHHHHHHHHhccCceEEEEecchh------hhHHHhhhccCcceeEEecccccccchhhhhcccchhhcccccccc
Confidence 9999999999999999999999976432 1112222111122222211100000 00
Q ss_pred CCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC--CCC-CCEEE
Q 008848 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKV-GDVYC 401 (551)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~-~d~~l 401 (551)
..+....+.+.+..... .........++++++|+|||||||+||||+++|+++...+......+. +.. .++++
T Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 180 HLPQAVKFNDALAKGAG----QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred CCcccccHHHHHhcCCC----CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 00112233443332221 111122345789999999999999999999999999876655444332 333 36788
Q ss_pred EecCcccchhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeec
Q 008848 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (551)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gG 480 (551)
+..|+.|..+. +.++.++..|++.++.+...++..+++.|+++++|++.++|+++..+.+.......+++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 89999998887 45677888899888777556788999999999999999999999999876544445678999999999
Q ss_pred CCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+++++++.+++.+.++ +++++.||+||++.++.... .....++++|+|++|++++|+|++|+++|.|.
T Consensus 336 ~~~~~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~-~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~ 403 (562)
T PRK05677 336 MALQLATAERWKEVTG-CAICEGYGMTETSPVVSVNP-SQAIQVGTIGIPVPSTLCKVIDDDGNELPLGE 403 (562)
T ss_pred ccCCHHHHHHHHHHcC-CCeeccCCccccCcceeecC-ccCCCCCccCccCCCCEEEEECCCCCCCCCCC
Confidence 9999999998887764 89999999999876543322 23345678999999999999999999999884
No 48
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-42 Score=370.01 Aligned_cols=340 Identities=19% Similarity=0.175 Sum_probs=278.7
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+|+++|+.+.++ .+||+||+++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|+
T Consensus 15 ~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~ 86 (521)
T PRK06187 15 GARKHPDKEAVYFDGR--------RTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPI 86 (521)
T ss_pred HHHHCCCceEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEec
Confidence 4578999999999887 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC--ceEEecCCCCCCCCCCCCCCcchHHhhccCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (551)
++.++.+++..+++.+++++++++.... +.+.++....+. +.+++...... ........+.+++.....
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 87 NIRLKPEEIAYILNDAEDRVVLVDSEFV------PLLAAILPQLPTVRTVIVEGDGPAA---PLAPEVGEYEELLAAASD 157 (521)
T ss_pred ccCCCHHHHHHHHHhcCCeEEEEcchHH------HHHHHHhhccCCccEEEEecCcccc---ccccccccHHHHhhcCCc
Confidence 9999999999999999999999987532 223333333322 22222221110 111234556666544322
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHh
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (551)
........++++++++|||||||.||+|.++|+++.+........++++++|++++.+|++|..+....+.++..
T Consensus 158 -----~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~ 232 (521)
T PRK06187 158 -----TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYLALMA 232 (521)
T ss_pred -----cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHHHHHh
Confidence 112234456889999999999999999999999999888877778899999999999999999888766779999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+++++++. .++..+++.|+++++|++.++|++++.|.+.......+++++|.+++|||++++++.+++.+.+ +++++
T Consensus 233 G~~~v~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~ 310 (521)
T PRK06187 233 GAKQVIPRR-FDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLV 310 (521)
T ss_pred CCEEEecCC-CCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchh
Confidence 999999875 4888999999999999999999999999887655556788999999999999999999998887 58999
Q ss_pred ccccccccccccccCCcCCC-----CCcCccCCCCCCceEEEECCCCCccCC
Q 008848 502 ESCGGTELSSAYIQGSLLQP-----QAFGAFSTATMTAGLVILDECGVPYVR 548 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~-----~~~~~iG~p~~g~~v~IlD~~g~~vp~ 548 (551)
|.||+||++........... ...+++|+|++|+.++|+|++++++|.
T Consensus 311 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~ 362 (521)
T PRK06187 311 QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPP 362 (521)
T ss_pred eeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCC
Confidence 99999998765443322221 256799999999999999999999988
No 49
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-42 Score=372.25 Aligned_cols=342 Identities=20% Similarity=0.194 Sum_probs=271.4
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
++++|+++|+++.+. ++||+||.++++++|+.|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 20 a~~~~~~~a~~~~~~--------~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 91 (546)
T PRK08314 20 ARRYPDKTAIVFYGR--------AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPV 91 (546)
T ss_pred HHHcCCCcceeecCc--------eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeec
Confidence 478999999999877 999999999999999999986 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCC------C------------CCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDV------G------------IPL 325 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~------~------------~~~ 325 (551)
+|.++.+++.+++++++++++++++... +.............+++....... . ...
T Consensus 92 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (546)
T PRK08314 92 NPMNREEELAHYVTDSGARVAIVGSELA------PKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALA 165 (546)
T ss_pred CcCcCHHHHHHHHHhCCCeEEEEccchh------hhHHHHhhccCcceEEEecchhhcccccccCccccccccccccccc
Confidence 9999999999999999999999987532 111111111111111111100000 0 000
Q ss_pred CCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecC
Q 008848 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTN 405 (551)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~ 405 (551)
..+...|++....... .......++++++|+|||||||.||||+++|+++++.+......+++.++|++++..|
T Consensus 166 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p 239 (546)
T PRK08314 166 PGGVVAWKEALAAGLA------PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLP 239 (546)
T ss_pred ccccccHHHHhcccCC------CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcC
Confidence 1123345555432211 1223446789999999999999999999999999988887777788999999999999
Q ss_pred cccchhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCC
Q 008848 406 LGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSN 484 (551)
Q Consensus 406 ~~~~~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~ 484 (551)
++|..++ +.++.++.+|+++++.+ ..++..+++.++++++|++.++|+++..++........+++++|.+++||++++
T Consensus 240 ~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 240 LFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred chHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 9999887 55788999999999987 467889999999999999999999999988765445566889999999999999
Q ss_pred hhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEEC-CCCCccCCCC
Q 008848 485 VDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 485 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~Gv 550 (551)
+++.+++.+.++ .+++|.||+||++....... ......+++|+|++|++++|+| ++|+++|.|.
T Consensus 319 ~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~ 383 (546)
T PRK08314 319 EAVAERLKELTG-LDYVEGYGLTETMAQTHSNP-PDRPKLQCLGIPTFGVDARVIDPETLEELPPGE 383 (546)
T ss_pred HHHHHHHHHHcC-CcEEecccccccccceecCC-CcCCCCCccCcccCCeEEEEEeCCCCcCCCCCC
Confidence 999999988875 78999999999876543322 2223457899999999999999 4689998874
No 50
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.3e-42 Score=365.12 Aligned_cols=327 Identities=20% Similarity=0.174 Sum_probs=263.9
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
+++.+||++|+++.+. .+||+||+++++++|++|++ . +++|++|+++++|++++++++|||+++|++++|
T Consensus 11 ~a~~~p~~~a~~~~~~--------~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 11 RAYLHPDRIAIITEEE--------EMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred HHHHCCCCeEEEECCc--------eEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 4578999999998766 99999999999999999986 6 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC-CceEEecCCCCCCCCCCCCCCcchHHhhccCCC
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~-~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (551)
+++.++.+++.+++++++++++++++.+. +....+..... ...+.+. ++.++......
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 141 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQ------NMALSMQKVSYVQRVISIT---------------SLKEIEDRKID 141 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHH------HHHHHhhhccCcceEEEec---------------chHhhhccCCC
Confidence 99999999999999999999999987532 11111111111 1111111 12222221111
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhH-HHHHHHH
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFL 420 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~ 420 (551)
......++++++|+|||||||.||||+++|+++..........++++.+|+++...|+.|..+.. .++.++.
T Consensus 142 -------~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~ 214 (496)
T PRK06839 142 -------NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLF 214 (496)
T ss_pred -------CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHh
Confidence 11234568899999999999999999999999876666555667889999999999999988874 4577899
Q ss_pred hCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCce
Q 008848 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (551)
Q Consensus 421 ~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (551)
.|+++++.+ ..++..+++.++++++|++.++|++++.+++.......+++++|.+++||+++++++.+++++. ++++
T Consensus 215 ~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~ 291 (496)
T PRK06839 215 AGGVIIVPR-KFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLF 291 (496)
T ss_pred cCcEEEEcc-CCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCee
Confidence 999998865 5788999999999999999999999999988765555678899999999999999999888775 4899
Q ss_pred eccccccccccccccCCc-CCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 501 IESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
++.||+||++..++.... ......+++|+|+++++++|+|++++++|+|.
T Consensus 292 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~ 342 (496)
T PRK06839 292 GQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGE 342 (496)
T ss_pred EeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCC
Confidence 999999999854332222 12345679999999999999999999999874
No 51
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=7e-42 Score=364.52 Aligned_cols=319 Identities=20% Similarity=0.206 Sum_probs=261.0
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
++.++||++|+++.++ .+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 11 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i 82 (483)
T PRK03640 11 RAFLTPDRTAIEFEEK--------KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLL 82 (483)
T ss_pred HHHhCCCceEEEeCCe--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEec
Confidence 4578999999998776 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
++.++.+++.+++++++++++++++.+.. ..... ....++++......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~---------~~~~~---------------------~~~~~~~~~~~~~~-- 130 (483)
T PRK03640 83 NTRLSREELLWQLDDAEVKCLITDDDFEA---------KLIPG---------------------ISVKFAELMNGPKE-- 130 (483)
T ss_pred CcCCCHHHHHHHHHhCCCCEEEEcchhhH---------HHhhh---------------------ccccHHHHhhcccc--
Confidence 99999999999999999999999875321 00000 00113333322111
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCC
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (551)
.........++++++++|||||||.||||+++|+++...+......++++++|++++..|++|..++..++.++..|+
T Consensus 131 --~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~ 208 (483)
T PRK03640 131 --EAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGM 208 (483)
T ss_pred --cCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCC
Confidence 011122345689999999999999999999999998877766666788999999999999999998877889999999
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecc
Q 008848 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (551)
Q Consensus 424 ~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (551)
++++.+ ..++..+++.|+++++|++.++|+++..|.+..... ....+||.+++||+++++...++++.. ++++++.
T Consensus 209 ~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 284 (483)
T PRK03640 209 RVVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQS 284 (483)
T ss_pred EEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeee
Confidence 999987 468899999999999999999999999998643222 234689999999999999998887764 4889999
Q ss_pred ccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
||+||++..+...... .....+++|+|++|++++|+|++ +++|.|.
T Consensus 285 YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~-~~~~~g~ 331 (483)
T PRK03640 285 YGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDG-VVVPPFE 331 (483)
T ss_pred eccCcccccccccCcccccccCCCcccccCCcEEEEecCC-CcCCCCC
Confidence 9999987543332222 23456899999999999999864 8888774
No 52
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-41 Score=367.02 Aligned_cols=345 Identities=17% Similarity=0.159 Sum_probs=265.8
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+..+|++.++.+... +..+.+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 ~~~~~~~~~~~~~~~----~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 95 (539)
T PRK07008 20 ARHAGDTEIVSRRVE----GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTIN 95 (539)
T ss_pred HhhCCCceEEEeecc----CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeecc
Confidence 367788888775322 2345899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc-e-EEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-A-IVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
|.++++++.++++++++++++++..+. +....+....... . +.+..... ... ......+++++......
T Consensus 96 ~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~~~~~- 166 (539)
T PRK07008 96 PRLFPEQIAYIVNHAEDRYVLFDLTFL------PLVDALAPQCPNVKGWVAMTDAAH-LPA-GSTPLLCYETLVGAQDG- 166 (539)
T ss_pred cccCHHHHHHHHhccCCcEEEEcchhH------HHHHHHHhhCCCceEEEEEccCCc-ccc-CCcccccHHHHhcccCC-
Confidence 999999999999999999999987542 1122222222221 1 22221111 000 01124556666543221
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHH--HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHH
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA--EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~ 420 (551)
........++++++++|||||||.||||+++|++++.... .....++++++|++++..|++|..+...++.++.
T Consensus 167 ----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~ 242 (539)
T PRK07008 167 ----DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPL 242 (539)
T ss_pred ----CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHh
Confidence 1111234568899999999999999999999999864332 2334577889999999999988877655678899
Q ss_pred hCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCce
Q 008848 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (551)
Q Consensus 421 ~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (551)
.|+++++.+..+++..+++.+++++||++.++|+++..|.+.......+++++|.+++||+++++++.+++...++ +++
T Consensus 243 ~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~l 321 (539)
T PRK07008 243 TGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYG-VEV 321 (539)
T ss_pred cCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHhC-Cce
Confidence 9999999866678899999999999999999999999998765555567899999999999999999999988775 899
Q ss_pred eccccccccccccccCCcC------CC----CCcCccCCCCCCceEEEECCCCCccCC
Q 008848 501 IESCGGTELSSAYIQGSLL------QP----QAFGAFSTATMTAGLVILDECGVPYVR 548 (551)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~------~~----~~~~~iG~p~~g~~v~IlD~~g~~vp~ 548 (551)
++.||+||++...+..... .+ ....++|+|++|++++|+|++++++|.
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~ 379 (539)
T PRK07008 322 IHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPW 379 (539)
T ss_pred ecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCC
Confidence 9999999998543322110 00 124689999999999999999998875
No 53
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.3e-41 Score=368.99 Aligned_cols=354 Identities=19% Similarity=0.164 Sum_probs=273.0
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+++|+++.+.+ +.+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 25 ~~~~~~~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l 98 (559)
T PRK08315 25 TAARYPDREALVYRDQG------LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTI 98 (559)
T ss_pred HHHHCCCCeEEEEcCCC------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEec
Confidence 34789999999985431 3799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcC-------------CCceEEecCCCCCCCCCCCCCCc
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------------PLKAIVLPAIGNDVGIPLREQDL 330 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~vv~~~~~~~~~~~~~~~~ 330 (551)
+|..+.+++..++++++++++++++..... ............. +....++..... ...+..
T Consensus 99 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 172 (559)
T PRK08315 99 NPAYRLSELEYALNQSGCKALIAADGFKDS-DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE-----KHPGML 172 (559)
T ss_pred CccCCHHHHHHHHHhcCCCEEEEecccccc-chHHHHHHhhhhhhcccccccccccCCCceeEEeeccc-----CCcccc
Confidence 999999999999999999999998753210 0000011110000 000111111110 011234
Q ss_pred chHHhhccCCCCC-CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccc
Q 008848 331 SWKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWV 409 (551)
Q Consensus 331 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 409 (551)
.++++........ ...........+++++||+|||||||.||||.++|++++..+......++++++|+++...|+.|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 252 (559)
T PRK08315 173 NFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPVPLYHC 252 (559)
T ss_pred cHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEecCcHHH
Confidence 4555543321100 000111223456889999999999999999999999998888877777899999999999999998
Q ss_pred hhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhH
Q 008848 410 MGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDD 488 (551)
Q Consensus 410 ~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~ 488 (551)
.+. +.++.++..|+++++....+++..+++.++++++|++.++|+++..++........++++||.+++||++++++++
T Consensus 253 ~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~ 332 (559)
T PRK08315 253 FGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVM 332 (559)
T ss_pred HHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHHH
Confidence 886 4578899999999976656788999999999999999999999998887655555678999999999999999999
Q ss_pred HHHHHhccCCceeccccccccccccccCCcCC--CCCcCccCCCCCCceEEEECCC-CCccCCCC
Q 008848 489 LWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDEC-GVPYVRTF 550 (551)
Q Consensus 489 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~g~~v~IlD~~-g~~vp~Gv 550 (551)
+.+.+.++..+++|.||+||++..++...... .....++|+|++|++++|+|++ |+++|.|.
T Consensus 333 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~ 397 (559)
T PRK08315 333 KRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGE 397 (559)
T ss_pred HHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCC
Confidence 99988887667999999999986543322211 2346799999999999999988 99999874
No 54
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.4e-42 Score=368.55 Aligned_cols=350 Identities=20% Similarity=0.158 Sum_probs=275.0
Q ss_pred cchhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHH
Q 008848 172 VLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIY 250 (551)
Q Consensus 172 ~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~ 250 (551)
..|..+.+.. +++.+|+++|+.+.+. .+||.||.++++++|++|.+. +++||+|+|+++|++++++++
T Consensus 16 ~~n~~~~~~~---~a~~~~~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 84 (542)
T PRK07786 16 RQNWVNQLAR---HALMQPDAPALRFLGN--------TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESV 84 (542)
T ss_pred ccCHHHHHHH---HHHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 3455544332 3467899999998876 899999999999999999999 999999999999999999999
Q ss_pred HHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCCCCCCCCCCC
Q 008848 251 LAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQD 329 (551)
Q Consensus 251 lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~~~~~~~~~~ 329 (551)
+||+++|++++|+++..+.+++.++++++++++++++.... ..........+. +.+++..... ..+.
T Consensus 85 ~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 152 (542)
T PRK07786 85 LAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA------PVATAVRDIVPLLSTVVVAGGSS------DDSV 152 (542)
T ss_pred HHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH------HHHHHhhhccCccceEEEecCCC------cccc
Confidence 99999999999999999999999999999999999987532 111111111111 1122111100 1133
Q ss_pred cchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCC-CCCCEEEEecCccc
Q 008848 330 LSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL-KVGDVYCWPTNLGW 408 (551)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~d~~l~~~~~~~ 408 (551)
.++++++..... .........+++++++|||||||.||||+++|+++.+.+......+++ ..++++++..|+.|
T Consensus 153 ~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 227 (542)
T PRK07786 153 LGYEDLLAEAGP-----AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFH 227 (542)
T ss_pred cCHHHHhhccCC-----CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHH
Confidence 456666543322 112223456789999999999999999999999998877766666666 67889999999999
Q ss_pred chhhHHHHHHHHhCCEEEEec-CCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhh
Q 008848 409 VMGPVILFSSFLNGATLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDD 487 (551)
Q Consensus 409 ~~~~~~~~~~l~~G~~lvl~~-~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~ 487 (551)
..++..++.++..|+++++.+ ..+++..+++.|+++++|++.++|+++..|.........+ .++|.+++||+++++++
T Consensus 228 ~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~ 306 (542)
T PRK07786 228 IAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTL 306 (542)
T ss_pred HHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHH
Confidence 988888899999999999975 3458889999999999999999999999998764333222 37999999999999999
Q ss_pred HHHHHHhccCCceeccccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
.+++.+.+++.++++.||+||++...+..... .....+++|+|++|+.++|+|++++++|.|.
T Consensus 307 ~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~ 370 (542)
T PRK07786 307 LRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGE 370 (542)
T ss_pred HHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCC
Confidence 99999988878999999999997543322211 1234578999999999999999999999874
No 55
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.4e-42 Score=373.01 Aligned_cols=340 Identities=15% Similarity=0.113 Sum_probs=257.4
Q ss_pred CCCCCCceEEEEecCCC--CCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 186 RRKEDNTVAIVWREDRC--DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~--~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
++++|+++|+++.+.+. ....++++||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|
T Consensus 16 a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 16 AQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVL 95 (552)
T ss_pred HHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEE
Confidence 46799999999864310 112234799999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcC-CC--ceEEecCCCCCCCCCCCCCCcchHHhhccC
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-PL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~-~~--~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (551)
++|.++.+++.+++++++++++|+++.. .....+.... .. ..+.+... .......++++....
T Consensus 96 l~~~~~~~~l~~~l~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~ 161 (552)
T PRK09274 96 VDPGMGIKNLKQCLAEAQPDAFIGIPKA-------HLARRLFGWGKPSVRRLVTVGGR-------LLWGGTTLATLLRDG 161 (552)
T ss_pred cCCCccHHHHHHHHHhcCCCEEEeccHH-------HHHHHHhccCccchhheeccccc-------cccCCccHHHhcccC
Confidence 9999999999999999999999986521 0001111100 00 11111100 011222455543221
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHH
Q 008848 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (551)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 419 (551)
.. .........++++++|+|||||||.||||+++|+++.+.+......++++++++.++..|+.|. ..+
T Consensus 162 ~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~-------~~~ 230 (552)
T PRK09274 162 AA----APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFAL-------FGP 230 (552)
T ss_pred cc----ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHh-------hhh
Confidence 11 1122233467899999999999999999999999999888877778899999999888777543 234
Q ss_pred HhCCEEEEecC------CCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHH
Q 008848 420 LNGATLALYQG------SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (551)
Q Consensus 420 ~~G~~lvl~~~------~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~ 493 (551)
..|+++++.+. ..++..+++.|+++++|++.++|++++.|.+.......++++||.+++||+++++++.+++.+
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~ 310 (552)
T PRK09274 231 ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRA 310 (552)
T ss_pred hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHH
Confidence 57888887642 346789999999999999999999999998765444567899999999999999999999998
Q ss_pred hcc-CCceeccccccccccccccCCcC---------CCCCcCccCCCCCCceEEEECC---------CCCccCCCC
Q 008848 494 KAW-YNAIIESCGGTELSSAYIQGSLL---------QPQAFGAFSTATMTAGLVILDE---------CGVPYVRTF 550 (551)
Q Consensus 494 ~~~-~~~l~n~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~g~~v~IlD~---------~g~~vp~Gv 550 (551)
.++ +++++|.||+||++..++..... ......++|+|++|++++|+|+ +++++|+|.
T Consensus 311 ~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~ 386 (552)
T PRK09274 311 MLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGE 386 (552)
T ss_pred HcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCC
Confidence 886 37999999999987643322111 1112347999999999999994 567888874
No 56
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.1e-41 Score=363.16 Aligned_cols=349 Identities=21% Similarity=0.232 Sum_probs=275.0
Q ss_pred chhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHH
Q 008848 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (551)
Q Consensus 173 ~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~l 251 (551)
+|.+++.++.+. ++.+||++|+++.+. .+||.||+++++++|++|.+. +++|++|+++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~-~~~~p~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~ 73 (508)
T TIGR02262 3 YNAAEDLLDRNV-VEGRGGKTAFIDDIS--------SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFL 73 (508)
T ss_pred chHHHHHHHHHH-hcccCCceEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 566777776542 467999999998766 899999999999999999999 9999999999999999999999
Q ss_pred HHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc-eEEecCCCCCCCCCCCCCCc
Q 008848 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDL 330 (551)
Q Consensus 252 A~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~vv~~~~~~~~~~~~~~~~ 330 (551)
||+++|++++|+++.++.+++.++++.++++++++++... +.+.......+.. .++...... ....
T Consensus 74 a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 140 (508)
T TIGR02262 74 GAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL------PVIKAALGKSPHLEHRVVVGRPE-------AGEV 140 (508)
T ss_pred HHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH------HHHHHHHhcCCCccEEEEeCCCC-------cccc
Confidence 9999999999999999999999999999999999987532 1122222222221 122211100 1122
Q ss_pred chHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHH-hhhhcCCCCCCEEEEecCcccc
Q 008848 331 SWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE-GWAHIDLKVGDVYCWPTNLGWV 409 (551)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~-~~~~~~~~~~d~~l~~~~~~~~ 409 (551)
.+.++...... ...+....++++++|+|||||||.||||+++|+++...+.. ....++++++|+++...|++|+
T Consensus 141 ~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~ 215 (508)
T TIGR02262 141 QLAELLATESE-----QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFA 215 (508)
T ss_pred cHHHHhhcCCC-----ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHH
Confidence 34444332211 11222345689999999999999999999999999876654 3455788999999999999999
Q ss_pred hhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhH
Q 008848 410 MGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDD 488 (551)
Q Consensus 410 ~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~ 488 (551)
.++ ..++.++..|+++++.++.+++..+++.|+++++|++.++|+++..++...........++|.+++||+++++++.
T Consensus 216 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~ 295 (508)
T TIGR02262 216 YGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVG 295 (508)
T ss_pred HHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHH
Confidence 887 4567789999999998766788999999999999999999999988876543333446789999999999999999
Q ss_pred HHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 489 LWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 489 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+.|.+.++ +++++.||+||++...+... ......+++|+|++|++++|+|++|+++|+|.
T Consensus 296 ~~~~~~~~-~~v~~~YG~tE~~~~~~~~~-~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~ 355 (508)
T TIGR02262 296 QRWQARFG-VDIVDGIGSTEMLHIFLSNL-PGDVRYGTSGKPVPGYRLRLVGDGGQDVAAGE 355 (508)
T ss_pred HHHHHHhC-CchhhCccccccCceeecCC-ccCCCCCCcCCCCCCcEEEEECCCCCCCCCCC
Confidence 98888775 79999999999986443322 22334578999999999999999999999874
No 57
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-41 Score=367.57 Aligned_cols=353 Identities=18% Similarity=0.161 Sum_probs=272.1
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+++.+.+ +.+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 28 ~~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~ 101 (558)
T PRK12583 28 VARFPDREALVVRHQA------LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNIN 101 (558)
T ss_pred HHHCCCCeEEEecCCC------cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecC
Confidence 4789999999885431 3899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhc-------------CCCceEEecCCCCCCCCCCCCCCcc
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-------------APLKAIVLPAIGNDVGIPLREQDLS 331 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~vv~~~~~~~~~~~~~~~~~ 331 (551)
+.++.+++.+++++++++++++++..... +....+...... .+....++..... .......
T Consensus 102 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 175 (558)
T PRK12583 102 PAYRASELEYALGQSGVRWVICADAFKTS-DYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPA-----PPPGFLA 175 (558)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEecccccc-chhHHHHHHhhhhccccccccccccCCcceEEEEecCC-----CCccccc
Confidence 99999999999999999999998753211 111111111000 1111111111110 0112234
Q ss_pred hHHhhccCCCCC-CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccch
Q 008848 332 WKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVM 410 (551)
Q Consensus 332 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 410 (551)
|+++........ ...........++++++++|||||||.||||+++|+++.+.+......++++++|++++..|++|..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 255 (558)
T PRK12583 176 WHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCF 255 (558)
T ss_pred hHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhh
Confidence 554433221100 0001111234568899999999999999999999999988887777778899999999999999988
Q ss_pred hh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHH
Q 008848 411 GP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDL 489 (551)
Q Consensus 411 ~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~ 489 (551)
+. +.++.++..|+++++.....++..+++.|+++++|++.++|+++..++........+++++|.+++||+++++++.+
T Consensus 256 g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~ 335 (558)
T PRK12583 256 GMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMR 335 (558)
T ss_pred hHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHH
Confidence 87 45778899999998876567888999999999999999999999888876544456789999999999999999999
Q ss_pred HHHHhccCCceeccccccccccccccCCcC--CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 490 WLSSKAWYNAIIESCGGTELSSAYIQGSLL--QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
++.+.++...+++.||+||++.+++..... ......++|+|++++.++|+|++++++|.|.
T Consensus 336 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~ 398 (558)
T PRK12583 336 RVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATVPRGE 398 (558)
T ss_pred HHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCCCCCC
Confidence 998888766899999999998754433221 1234678999999999999999999999873
No 58
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.6e-42 Score=384.13 Aligned_cols=331 Identities=18% Similarity=0.207 Sum_probs=254.8
Q ss_pred cCCCCCC-ceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDN-TVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd-~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+ ++|+.+.+. +++||+||.++++++|++|++.+++||+|+|+++|++++++++|||+++|++++|+
T Consensus 213 ~~~~~p~~~~a~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl 285 (718)
T PRK08043 213 AQYRYGAGKPCIEDVNF-------TPDSYRKLLKKTLFVGRILEKYSVEGERIGLMLPNATISAAVIFGASLRRRIPAMM 285 (718)
T ss_pred HHHHhCCCCcceEcCCC-------CcccHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCcHHHHHHHHHHHHcCCccccc
Confidence 3478897 688875321 28999999999999999997668999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCCCCCCCCCCCcchHHh--h-ccC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDF--L-SSV 339 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~~~~~~~~~~~~~~~~--~-~~~ 339 (551)
++.++.+++++++++++++++++++++....+... ....... ..+++.... ....+.+. . ...
T Consensus 286 ~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~ 352 (718)
T PRK08043 286 NYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH----LPEQLTQVRWVYLEDLK---------DDVTTADKLWIFAHL 352 (718)
T ss_pred ccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCC----hhhhhccccEEEhhhhh---------hhcchhHHHHHHHHH
Confidence 99999999999999999999999876432111000 0011111 122211100 00011110 0 000
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHH
Q 008848 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (551)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (551)
.. .........++|+++|+|||||||.||||+++|+++++.+.+....++++++|++++..|++|..+. ..++.+
T Consensus 353 ~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~ 428 (718)
T PRK08043 353 LM----PRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTP 428 (718)
T ss_pred hC----CccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHH
Confidence 00 0001123457899999999999999999999999999888777777889999999999999999887 457889
Q ss_pred HHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCC
Q 008848 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (551)
Q Consensus 419 l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (551)
++.|+++++.+...+...+++.++++++|++.++|+++..+.+.. ...++++||.+++||+++++++.+.+...++ +
T Consensus 429 l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g-~ 505 (718)
T PRK08043 429 LLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKFG-L 505 (718)
T ss_pred HHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHcC-C
Confidence 999999999875456677889999999999999999998876542 3456889999999999999999998888775 8
Q ss_pred ceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCC
Q 008848 499 AIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECG 543 (551)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g 543 (551)
+++|.||+||++..++...+ .....+++|+|+||++++|+|++|
T Consensus 506 ~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~~~i~d~~~ 549 (718)
T PRK08043 506 RILEGYGVTECAPVVSINVP-MAAKPGTVGRILPGMDARLLSVPG 549 (718)
T ss_pred CeecccCcccccceEEecCC-cccCCCCCCCcCCCCeeEEecCCC
Confidence 99999999999765443322 234568999999999999999764
No 59
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-41 Score=364.51 Aligned_cols=343 Identities=19% Similarity=0.150 Sum_probs=274.4
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+.+.+. .+||+||.++++++|+.|.+. +++||+|+++++|+++++++++||+++|++++|++
T Consensus 21 a~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 92 (523)
T PRK08316 21 ARRYPDKTALVFGDR--------SWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVN 92 (523)
T ss_pred HHHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 478899999998876 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
+.++.+++.++++.+++++++++.... ....+..+......+.+..... ..........++++......
T Consensus 93 ~~~~~~~i~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--- 161 (523)
T PRK08316 93 FMLTGEELAYILDHSGARAFLVDPALA------PTAEAALALLPVDTLILSLVLG--GREAPGGWLDFADWAEAGSV--- 161 (523)
T ss_pred cccCHHHHHHHHHhCCCCEEEEccchH------HHHHHHhhhcCccceeeeeccc--ccccccchhhHHHHHhcCCC---
Confidence 999999999999999999999987532 1112221111111111111100 00111223445544433221
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHH-HHHHHHhCC
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGA 423 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~ 423 (551)
.........+++++|+|||||||.||+|+++|++++.........++++++++++...|+.|..+... ++.++..|+
T Consensus 162 --~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~ 239 (523)
T PRK08316 162 --AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGA 239 (523)
T ss_pred --ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCc
Confidence 11223456789999999999999999999999999888777777788999999999999999888743 556788999
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecc
Q 008848 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (551)
Q Consensus 424 ~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (551)
++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||++++.++.+.+++.+++.++++.
T Consensus 240 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 318 (523)
T PRK08316 240 TNVILD-APDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNC 318 (523)
T ss_pred eEEEec-CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeee
Confidence 999976 4688999999999999999999999999988765556678899999999999999999999988877899999
Q ss_pred ccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
||+||++...+..... .....+++|+|+++++++|+|++|+++|.|.
T Consensus 319 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~ 366 (523)
T PRK08316 319 YGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGE 366 (523)
T ss_pred ecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCC
Confidence 9999988654433222 2244678999999999999999999999874
No 60
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=7.7e-42 Score=375.50 Aligned_cols=344 Identities=17% Similarity=0.183 Sum_probs=251.3
Q ss_pred cCCCCCCceEEEEecC-CCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
.++++|+++|+.+... .+..+.++.+||+||.++++++|++|.+. +++||+|+|+++|++||++++|||+++|+++||
T Consensus 51 ~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vp 130 (660)
T PLN02430 51 SVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVP 130 (660)
T ss_pred HHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEE
Confidence 3478999999976421 11123456789999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc--eEEecCCCCCCC---CCCCCCCcchHHhhc
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVG---IPLREQDLSWKDFLS 337 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~vv~~~~~~~~---~~~~~~~~~~~~~~~ 337 (551)
+++.++++++.+++++++++++++++... ...........+.. ++++........ ........+|++++.
T Consensus 131 l~~~~~~~~l~~il~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (660)
T PLN02430 131 LYDTLGPGAVDYIVDHAEIDFVFVQDKKI-----KELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLH 205 (660)
T ss_pred eccCCCHHHHHHHHhccCCCEEEECHHHH-----HHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHH
Confidence 99999999999999999999999986421 00111111111111 222211110000 000112345777665
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhh-----cCCCCCCEEEEecCcccchhh
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-----IDLKVGDVYCWPTNLGWVMGP 412 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~-----~~~~~~d~~l~~~~~~~~~~~ 412 (551)
..... ........++|+++|+|||||||.||||+++|++++..+...... .+++++|++++++|++|..+.
T Consensus 206 ~~~~~----~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~ 281 (660)
T PLN02430 206 MGKEN----PSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDR 281 (660)
T ss_pred hhccC----CCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHH
Confidence 43320 111123357899999999999999999999999998776554221 256789999999999999887
Q ss_pred HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc----------------------------
Q 008848 413 VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC---------------------------- 464 (551)
Q Consensus 413 ~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~---------------------------- 464 (551)
...+.++..|++++++.+ ++..+++.|+++++|++.++|++++.+.+...
T Consensus 282 ~~~~~~l~~G~~i~~~~~--~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (660)
T PLN02430 282 MIEEYFFRKGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRG 359 (660)
T ss_pred HHHHHHHHcCCEEEEeCC--ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcC
Confidence 655667899999988753 56789999999999999999999987764200
Q ss_pred ------cCCCC----------C-CCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCcc
Q 008848 465 ------LEGLD----------W-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAF 527 (551)
Q Consensus 465 ------~~~~~----------l-~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~i 527 (551)
....+ + ++||.+++||+++++++.++++ .++.+.++++||+||+++.++...+......+++
T Consensus 360 ~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsv 438 (660)
T PLN02430 360 YSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTV 438 (660)
T ss_pred CCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeeccccCCCCCCc
Confidence 00000 1 5899999999999999866554 4444689999999999865444333333356899
Q ss_pred CCCCCCceEEEEC
Q 008848 528 STATMTAGLVILD 540 (551)
Q Consensus 528 G~p~~g~~v~IlD 540 (551)
|+|.++++++|+|
T Consensus 439 G~p~~~~evki~d 451 (660)
T PLN02430 439 GAPAVYNELRLEE 451 (660)
T ss_pred cCCCCceEEEEEE
Confidence 9999999999986
No 61
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-41 Score=366.27 Aligned_cols=338 Identities=20% Similarity=0.153 Sum_probs=264.5
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+.+.+. ++||+||.++++++|+.|++. +++||+|+|+++|+++++++++||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 88 (528)
T PRK07470 17 ARRFPDRIALVWGDR--------SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTN 88 (528)
T ss_pred HHHCCCceEEEECCc--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecC
Confidence 468999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
+.++.+++.+++++++++++++++.+.. ....+.+.......++..... .....++++......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--- 152 (528)
T PRK07470 89 FRQTPDEVAYLAEASGARAMICHADFPE------HAAAVRAASPDLTHVVAIGGA-------RAGLDYEALVARHLG--- 152 (528)
T ss_pred ccCCHHHHHHHHHhcCceEEEEcchhHH------HHHHHHhhCCcCceEEEeCCC-------cccccHHHHHhcCCC---
Confidence 9999999999999999999999875421 111222111111111111110 012345555443211
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhh--cCCCCCCEEEEecCcccchhhHHHHHHHHhC
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (551)
.........++++++|+|||||||.||||+++|+++...+...... .+..++|+++...|++|+.++..++ .++.|
T Consensus 153 -~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g 230 (528)
T PRK07470 153 -ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVARG 230 (528)
T ss_pred -CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHhcC
Confidence 1112234567899999999999999999999999987554432222 2567889999999999998876554 67888
Q ss_pred CEEEEecC-CCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 423 ATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 423 ~~lvl~~~-~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
++.++++. .+++..+++.|+++++|++.++|++++.+.+.......+++++|.+++||+++++.+.+++...++ .+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~ 309 (528)
T PRK07470 231 AATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLG-KVLV 309 (528)
T ss_pred ceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhC-cHHH
Confidence 88888763 457889999999999999999999999998765545567889999999999999999888877775 6899
Q ss_pred ccccccccccccccCCcC-------CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLL-------QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~-------~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|.||+||+++.++..... .....+++|+|++|++++|+|++|+++|.|.
T Consensus 310 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~ 365 (528)
T PRK07470 310 QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGE 365 (528)
T ss_pred HhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCC
Confidence 999999987654432211 1234578999999999999999999999874
No 62
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2.5e-41 Score=364.13 Aligned_cols=341 Identities=16% Similarity=0.140 Sum_probs=265.7
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++.+|+++|+++.+. ++||+||+++++++|.+|.+. +++|++|+++++|++++++++|||+++|+++++++
T Consensus 33 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 104 (527)
T TIGR02275 33 AARYPDAIAIICGNR--------QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLAL 104 (527)
T ss_pred HHHCCCceEEEeCCc--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccc
Confidence 478999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
+.++.+++.++++++++++++++..... .........+....+. ..+++.... . ..............
T Consensus 105 ~~~~~~~~~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~-- 173 (527)
T TIGR02275 105 FSHRKSELTAYAQQIEPALYIIDRAHSL-FDYDAFARQLQSKLPTLRNIIVAGQT-R-------VEAELFLWLESPAE-- 173 (527)
T ss_pred cccCHHHHHHHHHhcCCcEEEEcCcccc-cchHHHHHHHHhhCCcceEEEEecCC-C-------CcchhhHHhhCcCc--
Confidence 9999999999999999999999865310 0000011111111221 112221100 0 00011111111111
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhH--HHHHHHHh
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~l~~ 421 (551)
........++++++|+|||||||.||||+++|+++...+......+.++.+|++++.+|++|..++. .++.++..
T Consensus 174 ---~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 174 ---PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred ---cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 1112244678999999999999999999999999988887777778899999999999999988764 47888999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+++++.+ .+++..+++.++++++|++.++|++++.|.+.......+++++|.+++||+++++++.+++.+.++ .+++
T Consensus 251 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~ 328 (527)
T TIGR02275 251 GGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFG-CQLQ 328 (527)
T ss_pred CCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHhC-CeEE
Confidence 99998865 568889999999999999999999999988765444566889999999999999999999988775 7999
Q ss_pred ccccccccccccccCCcCCCCCcCccCCCC-CCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~g~~v~IlD~~g~~vp~Gv 550 (551)
+.||+||++++............+++|+|+ ++.+++|+|++|+++|+|.
T Consensus 329 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~ 378 (527)
T TIGR02275 329 QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGE 378 (527)
T ss_pred eeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCC
Confidence 999999976543221111223456899999 5899999999999999874
No 63
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-41 Score=367.48 Aligned_cols=349 Identities=20% Similarity=0.181 Sum_probs=265.2
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+++|+++.+. .+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 41 ~~~~~p~~~a~~~~~~--------~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l 112 (573)
T PRK05605 41 AVARFGDRPALDFFGA--------TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEH 112 (573)
T ss_pred HHHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeec
Confidence 3478999999998766 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceE-EecCCCCCC--------------------C
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAI-VLPAIGNDV--------------------G 322 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~-vv~~~~~~~--------------------~ 322 (551)
+|.++.+++.+++++++++++|+++.... ....+........+ .+....... .
T Consensus 113 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (573)
T PRK05605 113 NPLYTAHELEHPFEDHGARVAIVWDKVAP------TVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAAL 186 (573)
T ss_pred CcCCCHHHHHHHHhccCCcEEEechhhHH------HHHhhhhccccceeEeeeccccccccccccccccccccccccccc
Confidence 99999999999999999999999775321 11111111111111 111000000 0
Q ss_pred CCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC-C-CCCCEE
Q 008848 323 IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-L-KVGDVY 400 (551)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~-~~~d~~ 400 (551)
.....+...|+++....... ...........++++++|+|||||||.||||+++|+++...+......+. + ..++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 265 (573)
T PRK05605 187 TGPAPGTVPWETLVDAAIGG-DGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERV 265 (573)
T ss_pred ccCCCcceeHHHHhhccccc-cccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEE
Confidence 00011334566554432210 00001122345789999999999999999999999998876654433222 2 346899
Q ss_pred EEecCcccchhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEee
Q 008848 401 CWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (551)
Q Consensus 401 l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~g 479 (551)
++..|+.|..+. ..++.++..|+++++.+ ..++..+++.|+++++|++.++|++++.|.+.......++++||.+++|
T Consensus 266 ~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~g 344 (573)
T PRK05605 266 LAALPMFHAYGLTLCLTLAVSIGGELVLLP-APDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSG 344 (573)
T ss_pred EEecChHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEEC
Confidence 999999988876 44667899999999876 4688999999999999999999999999988655555678899999999
Q ss_pred cCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCC--CCccCCCC
Q 008848 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC--GVPYVRTF 550 (551)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~--g~~vp~Gv 550 (551)
|+++++++.+++.+.++ .++++.||+||+++.+...........+++|+|++|++++|+|++ ++++|.|.
T Consensus 345 g~~l~~~~~~~~~~~~~-~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~ 416 (573)
T PRK05605 345 AMALPVSTVELWEKLTG-GLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGE 416 (573)
T ss_pred CCcCCHHHHHHHHHHhC-CCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCC
Confidence 99999999888877664 789999999999865544333233456799999999999999976 58888774
No 64
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=3.7e-41 Score=364.21 Aligned_cols=340 Identities=19% Similarity=0.157 Sum_probs=261.3
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
.++.+|+++|+.+...+ +.+||+||.++++++|+.|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 37 ~a~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl 110 (546)
T PLN02330 37 DAELYADKVAFVEAVTG------KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGA 110 (546)
T ss_pred hhhcCCCccEEEecCCC------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccC
Confidence 34789999999874221 2899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
++.++.+++.+++++++++++++++..... . +......+++.... ......|++++.....
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~---------~-~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~-- 171 (546)
T PLN02330 111 NPTALESEIKKQAEAAGAKLIVTNDTNYGK---------V-KGLGLPVIVLGEEK-------IEGAVNWKELLEAADR-- 171 (546)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEccchhhh---------H-hhcCCcEEEecCCC-------CCCcccHHHHHhhccc--
Confidence 999999999999999999999998764311 1 11112233332111 1123456666544321
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC--CCCCCEEEEecCcccchhhH-HHHHHHH
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPV-ILFSSFL 420 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~-~~~~~l~ 420 (551)
...........++++++|+|||||||.||||+++|+++...+......+. ....++++...|++|..+.. .++.++.
T Consensus 172 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~ 251 (546)
T PLN02330 172 AGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLR 251 (546)
T ss_pred cCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhh
Confidence 00111122344689999999999999999999999998876543221111 22346788889999988874 4678899
Q ss_pred hCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCC--CccEEEeecCCCChhhHHHHHHhccCC
Q 008848 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT--KIRSFASTGETSNVDDDLWLSSKAWYN 498 (551)
Q Consensus 421 ~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~--sLr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (551)
.|+++++.+ .+++..+++.++++++|++.++|+++..|.+.......+++ ++|.+++||+++++++.+++.+.++++
T Consensus 252 ~g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~ 330 (546)
T PLN02330 252 NKGKVVVMS-RFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGV 330 (546)
T ss_pred cCCEEEEec-ccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCC
Confidence 999999876 57889999999999999999999999999876544444444 478999999999999999999988778
Q ss_pred ceeccccccccccccccCC-cC---CCCCcCccCCCCCCceEEEEC-CCCCccCCCC
Q 008848 499 AIIESCGGTELSSAYIQGS-LL---QPQAFGAFSTATMTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~-~~---~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~Gv 550 (551)
++++.||+||++....... +. ......++|+|++|++++|+| ++++++|+|.
T Consensus 331 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~ 387 (546)
T PLN02330 331 QVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNT 387 (546)
T ss_pred eEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCC
Confidence 9999999999875433221 11 112346899999999999999 5789999874
No 65
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.5e-41 Score=363.81 Aligned_cols=343 Identities=20% Similarity=0.213 Sum_probs=266.1
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++||++|+++.++ +++||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 33 ~~~~pd~~a~~~~~~-------~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~ 105 (547)
T PRK06087 33 ARAMPDKIAVVDNHG-------ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLL 105 (547)
T ss_pred HHHCCCceEEEcCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccc
Confidence 467999999997652 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC--ceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
|.++.+++.+++++++++++++++..... ...+....+...... .++.+..... ......+.++......
T Consensus 106 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~- 177 (547)
T PRK06087 106 PSWREAELVWVLNKCQAKMFFAPTLFKQT-RPVDLILPLQNQLPQLQQIVGVDKLAP------ATSSLSLSQIIADYEP- 177 (547)
T ss_pred hhcCHHHHHHHHHhcCCeEEEEecccccc-cHHHHHHHHHhhCCCCcEEEEeCCcCC------CcCccCHHHHhccCCc-
Confidence 99999999999999999999998643110 111111122222221 2222221110 0122345555433221
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhH-HHHHHHHh
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~~ 421 (551)
. ......+++++++|+|||||||.||||+++|++++.........+++++++++++..|++|..+++ .++.+++.
T Consensus 178 ---~-~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 253 (547)
T PRK06087 178 ---L-TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLI 253 (547)
T ss_pred ---c-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhc
Confidence 0 112234578999999999999999999999999988777766777889999999999999998874 57788999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+++++.+ ..++..+++.|+++++|++..+|+.+..+++.......+++++|.+++||+++++++.+.+... +++++
T Consensus 254 g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~ 330 (547)
T PRK06087 254 GARSVLLD-IFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLL 330 (547)
T ss_pred CCEEEecC-CCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEE
Confidence 99999976 5688999999999999999988877776666544445568899999999999999998877654 58999
Q ss_pred ccccccccccccccCCcCC-CCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+.||+||++.......... ....+++|+|++|+.++|+|++++++|+|.
T Consensus 331 ~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~ 380 (547)
T PRK06087 331 SVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGC 380 (547)
T ss_pred EEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCC
Confidence 9999999876543322111 123457899999999999999999999874
No 66
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5e-41 Score=359.26 Aligned_cols=331 Identities=17% Similarity=0.128 Sum_probs=265.8
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+++|+++.+. .+||.||.++++++|++|.+. +++|++|+++++|++++++++|||+++|++++|+
T Consensus 11 ~~~~~~~~~a~~~~~~--------~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l 82 (497)
T PRK06145 11 HARRTPDRAALVYRDQ--------EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPI 82 (497)
T ss_pred HHHHCCCceEEEECCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEec
Confidence 3478999999998776 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
++.++.+++.+++++++++++++++..... .. .....+.+..... ..+..+.....
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~----------~~-~~~~~~~~~~~~~----------~~~~~~~~~~~--- 138 (497)
T PRK06145 83 NYRLAADEVAYILGDAGAKLLLVDEEFDAI----------VA-LETPKIVIDAAAQ----------ADSRRLAQGGL--- 138 (497)
T ss_pred ccccCHHHHHHHHHhcCCcEEEEccchhhh----------hh-cccceEEecCccc----------chhHHHhccCC---
Confidence 999999999999999999999998753210 00 0011122211000 01111111000
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhH-HHHHHHHhC
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNG 422 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~~G 422 (551)
.........++++++++|||||||.||||+++|+++..........+++..+++++...|++|..++. ..+.+++.|
T Consensus 139 --~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g 216 (497)
T PRK06145 139 --EIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVG 216 (497)
T ss_pred --CCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhcc
Confidence 00111234568999999999999999999999999887666666677889999999999999987773 456789999
Q ss_pred CEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceec
Q 008848 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (551)
Q Consensus 423 ~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (551)
+++++.+ .+++..+++.++++++|++.++|++++.++........+++++|.+++|||++++++++++.+.+++.++++
T Consensus 217 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~ 295 (497)
T PRK06145 217 GTLRIHR-EFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYID 295 (497)
T ss_pred CEEEECC-cCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEE
Confidence 9998876 578899999999999999999999999998765545566889999999999999999999998887789999
Q ss_pred cccccccccccccCCcC-CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 503 SCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 503 ~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
.||+||++..++..... .....+++|+|+++++++|+|++++++|+|.
T Consensus 296 ~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~ 344 (497)
T PRK06145 296 AYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNM 344 (497)
T ss_pred eecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCC
Confidence 99999998654332211 2234578999999999999999999999874
No 67
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-41 Score=364.22 Aligned_cols=346 Identities=16% Similarity=0.174 Sum_probs=265.8
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
.++++||++|++.... +..+++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 19 ~a~~~~~~~~~~~~~~----~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l 94 (542)
T PRK06018 19 AARIHGNREVVTRSVE----GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTV 94 (542)
T ss_pred HHHhCCCceEEEeecc----CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeecc
Confidence 3478999999985322 2345899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-c-eEEecCCCCCCCCCCCCCCcchHHhhccCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-K-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (551)
+|.++.+++..+++++++++++++..+. +.+.++....+. . .+++... ........++...|.+++.....
T Consensus 95 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 167 (542)
T PRK06018 95 NPRLFPEQIAWIINHAEDRVVITDLTFV------PILEKIADKLPSVERYVVLTDA-AHMPQTTLKNAVAYEEWIAEADG 167 (542)
T ss_pred ccccCHHHHHHHHhccCCCEEEEccccH------HHHHHHHhhCCCccEEEEeccc-ccccccCccccccHHHHhccCCc
Confidence 9999999999999999999999987542 222222222221 1 2222211 11010111133456665543321
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH-HH-HHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHH
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RC-TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~-~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 419 (551)
........++++++|+|||||||.||||+++|++.+ .. .......++++.+|+++...|++|+.+....+.++
T Consensus 168 -----~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~ 242 (542)
T PRK06018 168 -----DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAP 242 (542)
T ss_pred -----ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhh
Confidence 111233456789999999999999999999999743 22 22334457788999999999999988876667889
Q ss_pred HhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCc
Q 008848 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (551)
Q Consensus 420 ~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (551)
..|+++++....+++..+++.++++++|++.++|+++..|.+.......++++||.+++|||++++++.+++++ + +++
T Consensus 243 ~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~ 320 (542)
T PRK06018 243 SMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVE 320 (542)
T ss_pred hcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCC
Confidence 99999998655667889999999999999999999999998765444556889999999999999999999987 5 489
Q ss_pred eeccccccccccccccCCcCC----------CCCcCccCCCCCCceEEEECCCCCccCC
Q 008848 500 IIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDECGVPYVR 548 (551)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~g~~v~IlD~~g~~vp~ 548 (551)
+++.||+||++.+.+...... .....++|+|.+|++++|+|++|+++|.
T Consensus 321 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~ 379 (542)
T PRK06018 321 VRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPW 379 (542)
T ss_pred eEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCC
Confidence 999999999986543321110 0123579999999999999999999886
No 68
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=9.1e-42 Score=373.53 Aligned_cols=335 Identities=19% Similarity=0.160 Sum_probs=252.5
Q ss_pred CCCCCCceEEEEecCCC-CCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec-
Q 008848 186 RRKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI- 263 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl- 263 (551)
++++|+++|+++.+..+ ..+.++.+||+||.++++++|++|.+.+++||+|+++++|++++++++|||+++|++++|+
T Consensus 44 ~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 44 IANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred HHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhHHHHHHHHHHcCceeEecC
Confidence 36789999999754210 1234568999999999999999997669999999999999999999999999999999999
Q ss_pred CCCCC--HHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC----CceEEecCCCCCCCCCCCCCCcchHHhhc
Q 008848 264 ADSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (551)
Q Consensus 264 ~~~~~--~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~----~~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 337 (551)
++.++ .+++.+++++++++++|+++... +....+..... ..++.+.. +..
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~------------------~~~ 179 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAA------EAVEGFLRNLPRLRRPRVIAIDA------------------IPD 179 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHH------HHHHHHHhhcccccCceEEEecc------------------ccc
Confidence 68877 89999999999999999987532 11111111111 11222211 000
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC-CCCCCEEEEecCcccchhhHHHH
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGPVILF 416 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~ 416 (551)
... .........++++++|+|||||||.||||+++|+++++.+......++ +.+++++++++|++|+.++..++
T Consensus 180 ~~~-----~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~ 254 (612)
T PRK12476 180 SAG-----ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIG 254 (612)
T ss_pred ccc-----ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHH
Confidence 000 011112345689999999999999999999999999877666555667 78899999999999999987777
Q ss_pred HHHHhCCEEEEecC-CC--ChhhHHHHHH--HcCCcEEEecHHHHHHHHhcCc----cCCCCCCCccEEEeecCCCChhh
Q 008848 417 SSFLNGATLALYQG-SP--LERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDD 487 (551)
Q Consensus 417 ~~l~~G~~lvl~~~-~~--~~~~~~~~i~--~~~vt~l~~~Ps~l~~l~~~~~----~~~~~l~sLr~i~~gGe~l~~~~ 487 (551)
.+++.|++.++... .+ ++..+++.++ ++++|++..+|+++..++.... ....+++++| +++||+++++++
T Consensus 255 ~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~ 333 (612)
T PRK12476 255 FPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDA 333 (612)
T ss_pred HHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHH
Confidence 77777888777653 22 7788999995 5899999999999887765321 1244688999 999999999999
Q ss_pred HHHHHHhcc-----CCceeccccccccccccccCCcCCC--------------------------CCcCccCCCCCCceE
Q 008848 488 DLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP--------------------------QAFGAFSTATMTAGL 536 (551)
Q Consensus 488 ~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~p~~g~~v 536 (551)
.+++.+.++ ..+++|.||+||++..++...+... ...+++|+|++|+++
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v 413 (612)
T PRK12476 334 VTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWA 413 (612)
T ss_pred HHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEE
Confidence 998887762 2359999999998754332211100 013589999999999
Q ss_pred EEECCC-CCccCCCC
Q 008848 537 VILDEC-GVPYVRTF 550 (551)
Q Consensus 537 ~IlD~~-g~~vp~Gv 550 (551)
+|+|++ |+++|+|.
T Consensus 414 ~ivd~~~g~~~~~g~ 428 (612)
T PRK12476 414 VIVDPDTGAELPDGE 428 (612)
T ss_pred EEEeCCCCcCCCCCC
Confidence 999988 99999885
No 69
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.5e-42 Score=369.37 Aligned_cols=328 Identities=16% Similarity=0.073 Sum_probs=245.0
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+++++|+++|+++.+. +.++++||+||+++++++|++|.++ ++||+|+|+++|++++++++|||+++|++++ ++
T Consensus 11 ~~~~~~~~~a~~~~~~----~~~~~~ty~el~~~~~~lA~~L~~~-~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~-~~ 84 (525)
T PRK05851 11 AMTASGRDLVVLDRES----GLWRRHPWPEVHGRAENVAARLLDR-DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS-IL 84 (525)
T ss_pred HhcCCCCceEEeCCCC----CcceeecHHHHHHHHHHHHHHHHhc-CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-CC
Confidence 3478899999998653 3467999999999999999999987 9999999999999999999999999999865 44
Q ss_pred CC--------CCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhh
Q 008848 265 DS--------FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL 336 (551)
Q Consensus 265 ~~--------~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~ 336 (551)
|. ...+++.+++++++++++|+++... ..+..... .+ .+. .+....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~-~~-~~~---------------~~~~~~ 138 (525)
T PRK05851 85 PGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHL---------ERLRAVDS-SV-TVH---------------DLATAA 138 (525)
T ss_pred CCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHH---------HHHHHhhc-cc-ccc---------------cccccc
Confidence 42 2345666789999999999986531 11111000 00 000 000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCC-CCCEEEEecCcccchhhHHH
Q 008848 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK-VGDVYCWPTNLGWVMGPVIL 415 (551)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~ 415 (551)
.... .. ......+++++||+|||||||.||||+++|+++++.+.+....++++ ++|+++++.|++|+++++.+
T Consensus 139 ~~~~----~~--~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 212 (525)
T PRK05851 139 HTNR----SA--SLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAFL 212 (525)
T ss_pred cccc----cc--cCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHHH
Confidence 0000 00 01123568999999999999999999999999998888777778888 89999999999999999888
Q ss_pred HHHHHhCCEEEEecC-CC--ChhhHHHHHHHcCCcEEEecHHHHHHHHhcC-ccCCCCCCCccEEEeecCCCChhhHHHH
Q 008848 416 FSSFLNGATLALYQG-SP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTN-CLEGLDWTKIRSFASTGETSNVDDDLWL 491 (551)
Q Consensus 416 ~~~l~~G~~lvl~~~-~~--~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~-~~~~~~l~sLr~i~~gGe~l~~~~~~~~ 491 (551)
+.+++.|+++++.+. .+ ++..+++.++++++|++..+|.++..+.+.. .....++++||.+++||+++++++.+++
T Consensus 213 ~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~ 292 (525)
T PRK05851 213 LTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERF 292 (525)
T ss_pred HHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHH
Confidence 999999999999763 22 5678999999999998866555555554322 1234567899999999999999998888
Q ss_pred HHh---cc--CCceeccccccccccccccCCcC--------------CCCCcCccCCCCCCceEEEECCCC-CccCCCC
Q 008848 492 SSK---AW--YNAIIESCGGTELSSAYIQGSLL--------------QPQAFGAFSTATMTAGLVILDECG-VPYVRTF 550 (551)
Q Consensus 492 ~~~---~~--~~~l~n~YG~TE~~~~~~~~~~~--------------~~~~~~~iG~p~~g~~v~IlD~~g-~~vp~Gv 550 (551)
.+. ++ ..+++|.||+||++..++...+. ...+.+++|+|++|++++|+|+++ .++|.|.
T Consensus 293 ~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~ 371 (525)
T PRK05851 293 ATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGRE 371 (525)
T ss_pred HHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCC
Confidence 764 22 23599999999997654432211 012346899999999999999876 4678764
No 70
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=4.5e-41 Score=362.90 Aligned_cols=336 Identities=17% Similarity=0.145 Sum_probs=264.4
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+||++|+++.+. .+||+||.++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|+
T Consensus 30 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl 101 (542)
T PRK06155 30 QAERYPDRPLLVFGGT--------RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPI 101 (542)
T ss_pred HHHHCCCCeEEEeCCc--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEe
Confidence 4478999999998776 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcC-C-CceEEecCCCCCCCCCCCCCCcchHHhhccCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~-~-~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (551)
++.++.+++..+++++++++++++..... ......... . ...+.+..... .. ....|.........
T Consensus 102 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~ 169 (542)
T PRK06155 102 NTALRGPQLEHILRNSGARLLVVEAALLA------ALEAADPGDLPLPAVWLLDAPAS---VS---VPAGWSTAPLPPLD 169 (542)
T ss_pred ccccCHHHHHHHHHhcCceEEEEChhhHH------HHHHhcccccCcceEEEecCccc---cc---cccccchhhhcccC
Confidence 99999999999999999999999875321 111111111 1 12222221100 00 00111110000000
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHh
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (551)
.........++++++|+|||||||.||||+++|+++.+........+++++++++++..|++|..++..++.+++.
T Consensus 170 ----~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~ 245 (542)
T PRK06155 170 ----APAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALLA 245 (542)
T ss_pred ----CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHc
Confidence 0111223456899999999999999999999999998877766777889999999999999999998888999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.........+++|.++.|| +++++..++++.++ ++++
T Consensus 246 G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~-~~v~ 321 (542)
T PRK06155 246 GATYVLEP-RFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERFG-VDLL 321 (542)
T ss_pred CceEEeeC-CCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHcC-CCEE
Confidence 99999876 56889999999999999999999999999876544445577899887666 46888888887775 7899
Q ss_pred ccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|.||+||++..+.... .....+++|+|++|++++|+|++|+++|.|.
T Consensus 322 ~~YG~tE~~~~~~~~~--~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~ 368 (542)
T PRK06155 322 DGYGSTETNFVIAVTH--GSQRPGSMGRLAPGFEARVVDEHDQELPDGE 368 (542)
T ss_pred eeecccccCccccCCC--CCCCCCCcCccCCCceEEEECCCCCCCCCCC
Confidence 9999999986544321 2345678999999999999999999999874
No 71
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-41 Score=373.10 Aligned_cols=336 Identities=15% Similarity=0.127 Sum_probs=255.2
Q ss_pred CCCCCCceEEEEecCC-CCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec-
Q 008848 186 RRKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI- 263 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~-~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl- 263 (551)
++.+|+++|+++.+.. ...+..+.+||+||+++++++|++|.+.+++||+|+|+++|++++++++|||+++|++++|+
T Consensus 31 a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~ 110 (631)
T PRK07769 31 AKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLF 110 (631)
T ss_pred HHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeC
Confidence 3678999999975421 01233468999999999999999997669999999999999999999999999999999999
Q ss_pred CCCCC--HHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC----CceEEecCCCCCCCCCCCCCCcchHHhhc
Q 008848 264 ADSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (551)
Q Consensus 264 ~~~~~--~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~----~~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 337 (551)
++..+ .+++.+++++++++++|+++... +.........+ ..++.+... .+..
T Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~- 168 (631)
T PRK07769 111 DPAEPGHVGRLHAVLDDCTPSAILTTTDSA------EGVRKFFRARPAKERPRVIAVDAV---------------PDEV- 168 (631)
T ss_pred CCCccchHHHHHHHHHhCCCCEEEEChHHH------HHHHHHHhhccccccceEEEcccc---------------cccc-
Confidence 56665 68999999999999999987532 11111111111 111111100 0000
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHH
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (551)
.. ........++++++|+|||||||+||||+++|+++...+......+++.++++++++.|++|++++..++.
T Consensus 169 --~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~~~~ 241 (631)
T PRK07769 169 --GA-----TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLITVLL 241 (631)
T ss_pred --cc-----ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHHHHH
Confidence 00 01112345689999999999999999999999999888777777788899999999999999999987788
Q ss_pred HHHhCCEEEEecC-CC--ChhhHHHHHHHcCC---cEEEecHHHHHHHHhcC---c--cCCCCCCCccEEEeecCCCChh
Q 008848 418 SFLNGATLALYQG-SP--LERSFGKFVQDAGV---TVLGTVPSLVKAWRNTN---C--LEGLDWTKIRSFASTGETSNVD 486 (551)
Q Consensus 418 ~l~~G~~lvl~~~-~~--~~~~~~~~i~~~~v---t~l~~~Ps~l~~l~~~~---~--~~~~~l~sLr~i~~gGe~l~~~ 486 (551)
+++.|+++++++. .+ ++..+++.++++++ +++..+|+++..+.... . ....++++||.+++||++++++
T Consensus 242 ~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~ 321 (631)
T PRK07769 242 PALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPA 321 (631)
T ss_pred HHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHH
Confidence 8899999998853 23 78889999999986 78999999887665421 1 1145789999999999999999
Q ss_pred hHHHHHHhcc-----CCceeccccccccccccccCCcCCC--------------------------CCcCccCCCCCCce
Q 008848 487 DDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP--------------------------QAFGAFSTATMTAG 535 (551)
Q Consensus 487 ~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~p~~g~~ 535 (551)
+.+++.+.++ ...++|.||+||++..++....... ...+++|+|+++++
T Consensus 322 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~ 401 (631)
T PRK07769 322 SMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEW 401 (631)
T ss_pred HHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcE
Confidence 9999888763 2359999999998764433211100 01257999999999
Q ss_pred EEEEC-CCCCccCCCC
Q 008848 536 LVILD-ECGVPYVRTF 550 (551)
Q Consensus 536 v~IlD-~~g~~vp~Gv 550 (551)
++|+| ++|+++|.|.
T Consensus 402 ~~ivd~~~g~~~~~ge 417 (631)
T PRK07769 402 AVIVDPETASELPDGQ 417 (631)
T ss_pred EEEEcCCCCcCCCCCC
Confidence 99999 5799999885
No 72
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6e-41 Score=363.78 Aligned_cols=347 Identities=19% Similarity=0.179 Sum_probs=260.9
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
+++++|+++|+++.+. .+||+||+++++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|
T Consensus 33 ~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~ 104 (562)
T PRK12492 33 SCKKFADRPAFSNLGV--------TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVN 104 (562)
T ss_pred HHHhCCCCeeEecCCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEec
Confidence 3478999999987665 89999999999999999987 5 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEE---------------ecC----CCCCCCC
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV---------------LPA----IGNDVGI 323 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------------v~~----~~~~~~~ 323 (551)
++|.++.+++.+++++++++++++++.+... ...+.......... ... .......
T Consensus 105 ~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
T PRK12492 105 TNPLYTAREMRHQFKDSGARALVYLNMFGKL------VQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPA 178 (562)
T ss_pred cCccCCHHHHHHHHhccCceEEEeccccchH------HHHhhhccCceEEEeechhhccccccchhcccccccccccccc
Confidence 9999999999999999999999997643211 11111100000000 000 0000000
Q ss_pred CCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC---------C
Q 008848 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID---------L 394 (551)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~---------~ 394 (551)
...+....|+++...... ....+.....+++++|+|||||||.||||+++|+++...+......+. +
T Consensus 179 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 254 (562)
T PRK12492 179 YHLPQAVPFKQALRQGRG----LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLM 254 (562)
T ss_pred cCCcccccHHHHHhccCC----CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccc
Confidence 001122345555433211 111123345689999999999999999999999999776654433322 2
Q ss_pred CCC-CEEEEecCcccchhhH-HHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCC
Q 008848 395 KVG-DVYCWPTNLGWVMGPV-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (551)
Q Consensus 395 ~~~-d~~l~~~~~~~~~~~~-~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~s 472 (551)
..+ ++++...|++|..+.. .++..+..|++.++.....++..+++.|+++++|++..+|+++..|.+.......++++
T Consensus 255 ~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~ 334 (562)
T PRK12492 255 KEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSA 334 (562)
T ss_pred cCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccc
Confidence 333 5678889999988873 45667788888887764457888999999999999999999999998765555567889
Q ss_pred ccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 473 IRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 473 Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+|.+++||+++++++.+++.+.++ +++++.||+||++..++..........+++|+|++|++++|+|++|+++|+|.
T Consensus 335 lr~~~~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~ 411 (562)
T PRK12492 335 LKLTNSGGTALVKATAERWEQLTG-CTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELPLGE 411 (562)
T ss_pred eeEEEeccccCCHHHHHHHHHHhC-CceeeccCccccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCCCCC
Confidence 999999999999999988887664 89999999999876544333222334578999999999999999999999874
No 73
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3e-41 Score=360.57 Aligned_cols=310 Identities=69% Similarity=1.162 Sum_probs=229.5
Q ss_pred cCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCC
Q 008848 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (551)
Q Consensus 240 ~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~ 319 (551)
++|++|+++++|||+++|++++|+++.++.+++.+++++++++++|+++.....++..+...++......+.+++...+.
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 68999999999999999999999999999999999999999999999875422222222333332222223333321111
Q ss_pred CCCCCCCCCCcchHHhhccCCCC--CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCC
Q 008848 320 DVGIPLREQDLSWKDFLSSVDYH--PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (551)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (551)
...........+|+++....... .......+....++++++|+|||||||.||||+++|++++.........++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 00000001233566665321100 0000111122356899999999999999999999999987766555556788899
Q ss_pred CEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccE
Q 008848 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRS 475 (551)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~ 475 (551)
|++++.+|++|+.+.+.++.+|+.|+++++.++.+++..+++.|+++++|++.++|+++..|++... ....++++||.
T Consensus 161 d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~ 240 (499)
T PLN03051 161 DVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240 (499)
T ss_pred CEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheE
Confidence 9999999999999987788899999999998755678899999999999999999999999887542 33457889999
Q ss_pred EEeecCCCChhhHHHHHHhcc-CCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCC
Q 008848 476 FASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRT 549 (551)
Q Consensus 476 i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~G 549 (551)
+++|||++++++.+++++..+ +++++|.||+||++..++......+...+++|+|++|++++|+|++|+++|+|
T Consensus 241 i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g 315 (499)
T PLN03051 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDD 315 (499)
T ss_pred EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCC
Confidence 999999999998887766332 26799999999986533332222334567899999999999999999999987
No 74
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.2e-41 Score=361.41 Aligned_cols=322 Identities=16% Similarity=0.127 Sum_probs=255.0
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+||++|+++.+. .+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 44 ~a~~~p~~~a~~~~~~--------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl 115 (516)
T PRK13383 44 TAARWPGRTAIIDDDG--------ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPI 115 (516)
T ss_pred HHHHCCCCcEEEeCCC--------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEc
Confidence 4468999999998665 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
++.++.+++.+++++++++++++++.+.. .+.. .......+... . ..... .
T Consensus 116 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~-~~~~~~~~~~~-----------~---~~~~~-~---- 166 (516)
T PRK13383 116 STEFRSDALAAALRAHHISTVVADNEFAE---------RIAG-ADDAVAVIDPA-----------T---AGAEE-S---- 166 (516)
T ss_pred CccCCHHHHHHHHhcCCCCEEEEchhHHH---------HHHh-hhcceEEeccc-----------h---hhhhc-C----
Confidence 99999999999999999999999875421 1111 11112222100 0 00000 0
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH--HHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHh
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC--TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (551)
...+...++.++|+|||||||+||||+++|+..... .......+++.++|+++...|++|..+...++.++..
T Consensus 167 -----~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~ 241 (516)
T PRK13383 167 -----GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIAL 241 (516)
T ss_pred -----CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhc
Confidence 000112356689999999999999999999743211 1222345678899999999999999998878889999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCcc--CCCCCCCccEEEeecCCCChhhHHHHHHhccCCc
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (551)
|+++++.. .+++..+++.++++++|.+.++|+++..|.+.... ...+++++|.+++||+++++++.+++.+.++ .+
T Consensus 242 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g-~~ 319 (516)
T PRK13383 242 GGTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYG-DI 319 (516)
T ss_pred CCEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcC-ch
Confidence 99998765 57889999999999999999999999998764321 2345789999999999999999999988876 78
Q ss_pred eeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 500 IIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
++|.||+||++..+...........+++|+|++|++++|+|++|+++|+|.
T Consensus 320 v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~ 370 (516)
T PRK13383 320 LYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRV 370 (516)
T ss_pred hhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCC
Confidence 999999999976543322222334578999999999999999999999875
No 75
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-41 Score=363.99 Aligned_cols=329 Identities=14% Similarity=0.124 Sum_probs=248.9
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+++|+++.+. .+.+||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 23 ~a~~~p~~~a~~~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 23 QARQQPEAIALRRCDG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMA 96 (540)
T ss_pred HHhhCCCcEEEeecCC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEec
Confidence 4578999999986443 13799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
++.++.+++.++++.++++++++++....... .+.+.... ..+.++..... . . +.+.....
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~-~-~~~~~~~~--- 158 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGSKMASS------AVPEALHSIPVIAVDIAAVT-------R-E-SEHSLDAA--- 158 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccchhccc------cccccccccceeEeeccccc-------c-c-cccccccc---
Confidence 99999999999999999999999976421111 11110100 11222110000 0 0 00000000
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh----hhcCCCCCCEEEEecCcccchhhHHHHHH
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW----AHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (551)
.........++++++++|||||||.||||+++|+++.+...... ..+....+++++...|++|+.+++..+.+
T Consensus 159 ---~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~ 235 (540)
T PRK05857 159 ---SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTC 235 (540)
T ss_pred ---ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHH
Confidence 00111234568999999999999999999999999876543221 12455678899999999999998888899
Q ss_pred HHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCC
Q 008848 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (551)
Q Consensus 419 l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (551)
++.|+++++. ..++..+++.|++++||++.++|++++.|.+.......+++++|.+++||++++....+++ ..++ +
T Consensus 236 l~~G~~~v~~--~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~-~~~g-~ 311 (540)
T PRK05857 236 LMHGGLCVTG--GENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFI-EATG-V 311 (540)
T ss_pred hhcceeEEec--CCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHH-HHhC-C
Confidence 9999998763 3467889999999999999999999999987654445678999999999999988776544 4554 8
Q ss_pred ceeccccccccccccccCCcCC----CCCcCccCCCCCCceEEEECCCCC
Q 008848 499 AIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGV 544 (551)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~g~~v~IlD~~g~ 544 (551)
++++.||+||++...+...... ..+.+++|+|++|++++|+|++++
T Consensus 312 ~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~ 361 (540)
T PRK05857 312 RTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGI 361 (540)
T ss_pred eeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECcccc
Confidence 9999999999875433221111 224578999999999999998876
No 76
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-42 Score=327.90 Aligned_cols=344 Identities=18% Similarity=0.172 Sum_probs=281.5
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+|+++||++|++++++ .|||+||+++++++|..|+++ +++||+|.+.+||..+++++++|.+|+|+++|.-
T Consensus 37 ~A~~~pdriAv~d~~~--------~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlA 108 (542)
T COG1021 37 HAARYPDRIAVIDGER--------RLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLA 108 (542)
T ss_pred HHhhcCCceEEecCcc--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhc
Confidence 4589999999999887 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
-|.+...+|.+..+.++++.+|.+.... .+...+...++....+....++..+... .....+..+.....
T Consensus 109 LpsHr~~Ei~~f~~~~e~~~~i~~~~~~-gFd~~~~ar~~~a~~~tlr~v~v~ge~~-------~~~~~~~~~~~~a~-- 178 (542)
T COG1021 109 LPSHRASELGAFASQIEAALLIVARQHS-GFDYRPFARELVAKHPTLRHVIVAGEAE-------HPSVLEAALCHPAG-- 178 (542)
T ss_pred cchhhHHHHHHHHHhhcchheeechhhc-ccCcHHHHHHHHhhCCcceEEEEccCCC-------CcchhhhhhhCccc--
Confidence 9999999999999999999999987542 3333344455555555533333332211 11112222222221
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh--HHHHHHHHh
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP--VILFSSFLN 421 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~--~~~~~~l~~ 421 (551)
...+..+.+++++||...+.||||.||-+..+|..+..++......+.++..+++++..|..|.+.+ -.+++.++.
T Consensus 179 --~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~a 256 (542)
T COG1021 179 --LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLA 256 (542)
T ss_pred --cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheeee
Confidence 1122345567889999999999999999999999988888877788999999999999999997666 458899999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+++|+.+ ++++.....+|++|+||+..++|.+...++++......+++|||.+-+||..+++++.++....++ |.+.
T Consensus 257 gG~VVla~-~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~lg-C~LQ 334 (542)
T COG1021 257 GGTVVLAP-DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVLG-CQLQ 334 (542)
T ss_pred ccEEEECC-CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhhC-chHH
Confidence 99999976 678899999999999999999999999999988778889999999999999999999999988876 8999
Q ss_pred ccccccccccccccCCcCCCCCcCccCCCC-CCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~g~~v~IlD~~g~~vp~Gv 550 (551)
+.+||.|.-++++--......-..+-|||+ |.-+++|+|++|+||++|-
T Consensus 335 QVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE 384 (542)
T COG1021 335 QVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGE 384 (542)
T ss_pred HHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCC
Confidence 999999976654322111112235789997 5679999999999999995
No 77
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.3e-40 Score=357.85 Aligned_cols=345 Identities=18% Similarity=0.184 Sum_probs=264.4
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++||++|+++.+. .+.++.+||+||.++++++|+.|.++ +++||+|+++++|++++++++|||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~---~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 17 ADVYGHKTALIFESS---GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPIN 93 (517)
T ss_pred HHHCCCceEEEcccC---CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcC
Confidence 478999999998653 24456899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcC--CCceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA--PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~--~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
|.++.+++.++++++++++++++.... +.+.++.... ..+.+.+..... ........++++......
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~- 162 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFY------PMYRQIQQEDATPLRHICLTRVAL----PADDGVSSFTQLKAQQPA- 162 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchh------HHHHHHHhhccccCcEEEEecCCC----cccccccCHHHHhccCCc-
Confidence 999999999999999999999987532 2222222211 112222211110 001123345544333221
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHh
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~ 421 (551)
.........++++++|+|||||||.||||+++|++++...........+.+++++++..|++|..+. ..++.++..
T Consensus 163 ---~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 239 (517)
T PRK08008 163 ---TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSA 239 (517)
T ss_pred ---cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhc
Confidence 0111223456899999999999999999999999987654433334467889999999999987554 567888999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+++++.+ .+++..+++.|+++++|++.++|++++.+............+++.+.+++ +++++...++.+.++ ++++
T Consensus 240 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 316 (517)
T PRK08008 240 GATFVLLE-KYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERFG-VRLL 316 (517)
T ss_pred CcEEEEcc-ccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHhC-CeEE
Confidence 99999986 56888999999999999999999999998765433333456788877754 788888888877765 8999
Q ss_pred ccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|.||+||++..++..........+++|+|++|++++|+|++|+++|.|.
T Consensus 317 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~ 365 (517)
T PRK08008 317 TSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGE 365 (517)
T ss_pred eeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCC
Confidence 9999999986555443333445678999999999999999999999874
No 78
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-41 Score=370.92 Aligned_cols=340 Identities=17% Similarity=0.137 Sum_probs=250.5
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++||++|+++.+. ..+.++.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 58 ~a~~~pd~~a~~~~~~--~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl 135 (624)
T PRK12582 58 WAAEAPDRPWLAQREP--GHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPV 135 (624)
T ss_pred HHHHCCCchheecccC--CCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeec
Confidence 3478999999987542 123456999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCH-----HHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhcc
Q 008848 264 ADSFAA-----REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (551)
Q Consensus 264 ~~~~~~-----~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~ 338 (551)
+|.++. +++.+++++++++++|+++.... ......+ ......++++..... ......++++...
T Consensus 136 ~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~-~~~~~~~i~~~~~~~------~~~~~~~~~~~~~ 204 (624)
T PRK12582 136 SPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPF----ARALAAL-DLLDVTVVHVTGPGE------GIASIAFADLAAT 204 (624)
T ss_pred cCccccccCCHHHHHHHHHhcCCcEEEecCHHHH----HHHHHhh-hhcCceEEEEcCCCc------ccccccHHHHhhc
Confidence 999985 99999999999999999763100 0000111 111122222221110 0122345555443
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCC---CCEEEEecCcccchhhH-H
Q 008848 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV---GDVYCWPTNLGWVMGPV-I 414 (551)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~---~d~~l~~~~~~~~~~~~-~ 414 (551)
... ...........++++++|+|||||||.||||+++|++++.........+.... .++++.+.|++|.++.. .
T Consensus 205 ~~~--~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~ 282 (624)
T PRK12582 205 PPT--AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNAN 282 (624)
T ss_pred CCc--chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHH
Confidence 221 00001112345789999999999999999999999999877665544444443 57999999999998874 4
Q ss_pred HHHHHHhCCEEEEecCCCChh---hHHHHHHHcCCcEEEecHHHHHHHHhcCcc----CCCCCCCccEEEeecCCCChhh
Q 008848 415 LFSSFLNGATLALYQGSPLER---SFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----EGLDWTKIRSFASTGETSNVDD 487 (551)
Q Consensus 415 ~~~~l~~G~~lvl~~~~~~~~---~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~----~~~~l~sLr~i~~gGe~l~~~~ 487 (551)
++.++..|+++++.++.+++. .+++.++++++|++.++|++++.|.+.... ...++++||.+++||+++++++
T Consensus 283 ~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~ 362 (624)
T PRK12582 283 FNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDL 362 (624)
T ss_pred HHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHH
Confidence 667899999999976444433 456778999999999999999988753211 1234789999999999999999
Q ss_pred HHHHHHhc----c-CCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEEC
Q 008848 488 DLWLSSKA----W-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540 (551)
Q Consensus 488 ~~~~~~~~----~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD 540 (551)
.+++.+.+ + +++++|.||+||++..++... ......+++|+|++|++++|++
T Consensus 363 ~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~-~~~~~~~svG~p~pg~~v~i~~ 419 (624)
T PRK12582 363 YERMQALAVRTTGHRIPFYTGYGATETAPTTTGTH-WDTERVGLIGLPLPGVELKLAP 419 (624)
T ss_pred HHHHHHHHHhhcCCCceEEeccccccccceeeccc-CCCCCCCCCCcCCCCcEEEEcc
Confidence 99887752 2 357999999999976443222 2234567999999999999985
No 79
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=9.7e-41 Score=357.46 Aligned_cols=325 Identities=18% Similarity=0.184 Sum_probs=266.2
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++.+|+++|+.+.+. .+||+||.++++++|+.|.+. +++||+|+|+++|+.++++++|||+++|++++|++
T Consensus 10 a~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 81 (502)
T TIGR01734 10 AETYPQTIAYRYQGQ--------ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVD 81 (502)
T ss_pred HHHCCCceEEEcCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCC
Confidence 467899999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
+.++.+++.++++.++++++++++...... .....+.+. ....+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~------------~~~~~~~~~---------------~~~~~~~~~~~--- 131 (502)
T TIGR01734 82 TSIPSERIEMIIEAAGPELVIHTAELSIDA------------VGTQIITLS---------------ALEQAETSGGP--- 131 (502)
T ss_pred CcChHHHHHHHHHhcCCCEEEecccccccc------------cCCceEEch---------------HhhhhhhhcCC---
Confidence 999999999999999999999987532100 000111110 00111111100
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCE
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (551)
........+++.++|+|||||||.||||+++|+++...+.+....+++..+++++...|++|+.+++.++.++..|++
T Consensus 132 --~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~ 209 (502)
T TIGR01734 132 --VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGT 209 (502)
T ss_pred --ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCE
Confidence 001123356889999999999999999999999999888887777889999999999999999999888999999999
Q ss_pred EEEecCC--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceec
Q 008848 425 LALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (551)
Q Consensus 425 lvl~~~~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (551)
+++.+.. .++..+++.++++++|.+.++|++++.++........++++++.++++|++++++..+++.+.++++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 289 (502)
T TIGR01734 210 LHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYN 289 (502)
T ss_pred EEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEe
Confidence 9998742 36788999999999999999999998877654444556889999999999999999999999888789999
Q ss_pred cccccccccccccCCc----CCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 503 SCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 503 ~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
.||+||++++++.... .......++|+|++|++++|+|++++++|+|.
T Consensus 290 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~ 341 (502)
T TIGR01734 290 TYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGE 341 (502)
T ss_pred CccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCC
Confidence 9999998754332211 11233467999999999999999999999874
No 80
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.9e-40 Score=355.34 Aligned_cols=330 Identities=18% Similarity=0.165 Sum_probs=262.9
Q ss_pred CCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC
Q 008848 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (551)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~ 266 (551)
.+|+++|+.+.+. +.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.
T Consensus 14 ~~~~~~a~~~~~~-------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~ 86 (504)
T PRK07514 14 ADRDAPFIETPDG-------LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTA 86 (504)
T ss_pred hCCCCeEEEeCCC-------CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCC
Confidence 7899999987443 2899999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc-eEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCC
Q 008848 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (551)
Q Consensus 267 ~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (551)
++.+++..+++.++++++++++... .....+....... .+.+... ....+.+......
T Consensus 87 ~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----- 145 (504)
T PRK07514 87 YTLAELDYFIGDAEPALVVCDPANF------AWLSKIAAAAGAPHVETLDAD----------GTGSLLEAAAAAP----- 145 (504)
T ss_pred CCHHHHHHHHHhCCCcEEEEccchh------HHHHHhhhccCCceEEEecCC----------CcccHHHhhhhcC-----
Confidence 9999999999999999999987532 1112221111111 2222110 0111222221111
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCE
Q 008848 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (551)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~ 424 (551)
.........+++++||+|||||||.||||+++|++++..+......++++++|++++..|+.|..++ +.++.+++.|++
T Consensus 146 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 146 DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 1122234467899999999999999999999999999888777777889999999999999998886 457789999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccc
Q 008848 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (551)
Q Consensus 425 lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (551)
+++.+ ..++..+++.+. ++|++.++|+++..+++........++++|.+++||+++++++.+++.+.++ .+++|.|
T Consensus 226 ~~~~~-~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~Y 301 (504)
T PRK07514 226 MIFLP-KFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTG-HAILERY 301 (504)
T ss_pred EEECC-CCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhC-Ccceeec
Confidence 99976 467888999884 6999999999999988765555566889999999999999999999988775 7899999
Q ss_pred cccccccccccCCcCCCCCcCccCCCCCCceEEEEC-CCCCccCCCC
Q 008848 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~Gv 550 (551)
|+||++...+. ........+++|.|++|++++|+| ++++++|.|.
T Consensus 302 G~tE~~~~~~~-~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~ 347 (504)
T PRK07514 302 GMTETNMNTSN-PYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGE 347 (504)
T ss_pred ccccccccccC-CccccccCcccccCCCCcEEEEEECCCCCCCCCCC
Confidence 99998754332 222233457899999999999999 8899999874
No 81
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-40 Score=359.28 Aligned_cols=346 Identities=20% Similarity=0.178 Sum_probs=261.7
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+++.++ .+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 33 a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~ 104 (557)
T PRK07059 33 FRQYADRPAFICMGK--------AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVN 104 (557)
T ss_pred HHHcCCCceEEEcCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccC
Confidence 478999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecC-CCCC-----------------CCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPA-IGND-----------------VGIPLR 326 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~-~~~~-----------------~~~~~~ 326 (551)
|.++.+++.+++++++++++++++.+. .....+........+.+.. .... ......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (557)
T PRK07059 105 PLYTPRELEHQLKDSGAEAIVVLENFA------TTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSL 178 (557)
T ss_pred cccCHHHHHHHHHccCceEEEEchhhH------HHHHHhhcccCCceeEEecccccccccccccccccccccccccccCC
Confidence 999999999999999999999987532 1111111111111111111 0000 000001
Q ss_pred CCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhh----cCCC---CCCE
Q 008848 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH----IDLK---VGDV 399 (551)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~~~---~~d~ 399 (551)
++...+++++..... .........++++|+|+|||||||.||||+++|++++..+...... +... ....
T Consensus 179 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 179 PGHVRFNDALAEGAR----QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred CCcccHHHHhhccCC----CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 123345544433221 1112234567899999999999999999999999987655432211 1111 2346
Q ss_pred EEEecCcccchhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEe
Q 008848 400 YCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (551)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~ 478 (551)
+++..|++|..+. ...+.++..|++.++.+...++..+++.|+++++|.+.++|+++..+.........+++++|.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 7788899887765 456678889999888775457888999999999999999999999998875555567889999999
Q ss_pred ecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
||+++++.+.+++.+.++ +++++.||+||++..++..........+++|+|++|++++|+|++|+++|+|.
T Consensus 335 gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~ 405 (557)
T PRK07059 335 GGMAVQRPVAERWLEMTG-CPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLGE 405 (557)
T ss_pred ccccCCHHHHHHHHHHhC-CCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCCC
Confidence 999999999888887765 89999999999986544333222234578999999999999999999999885
No 82
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-40 Score=358.24 Aligned_cols=360 Identities=17% Similarity=0.135 Sum_probs=263.1
Q ss_pred CcCCCCcchhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 008848 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (551)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~ 244 (551)
+|......+.....+.. +++++|+++|+++.+. .+.+||+||+++++++|++|.+. +++||+|+|+++|++
T Consensus 8 ~~~~~~~~~~l~~~l~~--~a~~~p~~~ai~~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~ 79 (534)
T PRK05852 8 APMASDFGPRIADLVEV--AATRLPEAPALVVTAD------RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNA 79 (534)
T ss_pred cchhhhhcccHHHHHHH--HHHhCCCCcEEEecCC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcH
Confidence 44333333333334433 3478999999987543 13799999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCC
Q 008848 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIP 324 (551)
Q Consensus 245 e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~ 324 (551)
++++++|||+++|++++|++|.++.+++.+++++++++++|++........ ..... .....+.+......
T Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~---- 149 (534)
T PRK05852 80 EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA-----EPTTR-WWPLTVNVGGDSGP---- 149 (534)
T ss_pred HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc-----ccccc-ccceeeeecccccc----
Confidence 999999999999999999999999999999999999999999864211000 00000 00111111110000
Q ss_pred CCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEec
Q 008848 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPT 404 (551)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~ 404 (551)
....... ........ . ..........+++++|+|||||||.||||+++|+++.+.+......+++.++|++++..
T Consensus 150 -~~~~~~~-~~~~~~~~--~-~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 224 (534)
T PRK05852 150 -SGGTLSV-HLDAATEP--T-PATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVM 224 (534)
T ss_pred -ccccccc-ccccccCC--C-ccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEec
Confidence 0000000 00000000 0 00011111246789999999999999999999999998888777788899999999999
Q ss_pred CcccchhhH-HHHHHHHhCCEEEEecC-CCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccC--CCCCCCccEEEeec
Q 008848 405 NLGWVMGPV-ILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFASTG 480 (551)
Q Consensus 405 ~~~~~~~~~-~~~~~l~~G~~lvl~~~-~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~sLr~i~~gG 480 (551)
|++|..++. .++.+++.|+++++.+. .+++..+++.|+++++|++.++|+++..|.+..... ..+++++|.++++|
T Consensus 225 p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G 304 (534)
T PRK05852 225 PLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCS 304 (534)
T ss_pred CcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECC
Confidence 999998875 47778889999887543 457889999999999999999999999998754221 23478999999999
Q ss_pred CCCChhhHHHHHHhccCCceeccccccccccccccCCcC------C-CCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL------Q-PQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~------~-~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+++++++.+++.+.++ .++++.||+||++..++..... . ....+.+|+ .+|++++|+|++|+++|+|.
T Consensus 305 ~~~~~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~~g~~~~~g~ 379 (534)
T PRK05852 305 APLTAETAQALQTEFA-APVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGSDGLPLPAGA 379 (534)
T ss_pred CCCCHHHHHHHHHHhC-CChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECCCCCCCCCCC
Confidence 9999999999988875 7899999999998654332211 0 112334444 69999999999999999884
No 83
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2.8e-40 Score=357.11 Aligned_cols=346 Identities=20% Similarity=0.149 Sum_probs=261.0
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++.+|+++|+.+.++ .+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 31 ~~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 102 (541)
T TIGR03205 31 AADYGPRPALEFRDR--------PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLS 102 (541)
T ss_pred HHHcCCCceEEECCc--------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 478999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhc-CCCceEEecCCCCCC------CCCCCCCCcchHHhhc
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-APLKAIVLPAIGNDV------GIPLREQDLSWKDFLS 337 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~-~~~~~~vv~~~~~~~------~~~~~~~~~~~~~~~~ 337 (551)
|.++.+++.+++++++++++++++... ..+...+.... .....+++....... .........++++++.
T Consensus 103 ~~~~~~~l~~~i~~~~~~~vi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 103 PLDGERALSHKLSDSGARLLITSDLAA----LLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred CCCCHHHHHHHHhhcCceEEEEeCchh----hhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 999999999999999999999986310 01111111111 111222222211000 0001122345666554
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh-----hcCCCCCCEEEEecCcccchhh
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-----HIDLKVGDVYCWPTNLGWVMGP 412 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~-----~~~~~~~d~~l~~~~~~~~~~~ 412 (551)
.... ........++++++++|||||||.||||+++|+++.+....... .......+++++..|++|..+.
T Consensus 179 ~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~ 253 (541)
T TIGR03205 179 GAAA-----PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYAL 253 (541)
T ss_pred cCCC-----CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHH
Confidence 3211 11112345789999999999999999999999998765432211 1122345789999999998776
Q ss_pred H-HHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHH
Q 008848 413 V-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWL 491 (551)
Q Consensus 413 ~-~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~ 491 (551)
. .++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++
T Consensus 254 ~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 254 TVILLRSLRRGDLISLHQ-RFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHH
Confidence 4 4678899999988765 5688999999999999999999999999887543344567899999999999999999888
Q ss_pred HHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEE--CCCCCccCCCC
Q 008848 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL--DECGVPYVRTF 550 (551)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~Il--D~~g~~vp~Gv 550 (551)
.+.++ .++++.||+||++..++..........+++|+|+++++++|+ |++++++|+|.
T Consensus 333 ~~~~~-~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~ 392 (541)
T TIGR03205 333 ERKTG-LKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGE 392 (541)
T ss_pred HHHhC-CCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCCCC
Confidence 77665 789999999999865544333333456789999999998875 67889998874
No 84
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.6e-40 Score=356.73 Aligned_cols=336 Identities=15% Similarity=0.156 Sum_probs=263.2
Q ss_pred CCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCC
Q 008848 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268 (551)
Q Consensus 190 pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~ 268 (551)
||++|+++.+. .+||+||+++++++|++|.+. +++|++|+++++|++++++++|||+++|++++++++..+
T Consensus 37 p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~ 108 (536)
T PRK10946 37 SDAIAVICGER--------QFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQ 108 (536)
T ss_pred CCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCcccc
Confidence 99999998766 899999999999999999999 999999999999999999999999999998888788788
Q ss_pred HHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCC
Q 008848 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347 (551)
Q Consensus 269 ~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (551)
..++..++++++++++++++.... .........+....+. ..+++... .....+.++...... .
T Consensus 109 ~~~~~~~~~~~~~~~li~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~ 173 (536)
T PRK10946 109 RSELNAYASQIEPALLIADRQHAL-FSDDDFLNTLVAEHSSLRVVLLLND---------DGEHSLDDAINHPAE-----D 173 (536)
T ss_pred HHHHHHHHhhcCCCEEEEeccccc-cchHHHHHHHHhhCCCceEEEEecC---------CCCccHHHHhhCccc-----c
Confidence 889999999999999999864210 0000011122222222 22222211 122234444433221 1
Q ss_pred CCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhH--HHHHHHHhCCEE
Q 008848 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLNGATL 425 (551)
Q Consensus 348 ~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~l~~G~~l 425 (551)
.......++++++|+|||||||.||||+++|+++...+......++++++|++++..|++|..++. .++.++..|+++
T Consensus 174 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~ 253 (536)
T PRK10946 174 FTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTV 253 (536)
T ss_pred cccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEE
Confidence 122344678999999999999999999999999999888777788899999999999999977763 578889999999
Q ss_pred EEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhc--CccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecc
Q 008848 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (551)
Q Consensus 426 vl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~--~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (551)
++.+ .+++..+++.++++++|++.++|+++..|++. .......++++|.+++||+++++++.+++.+.++ +++++.
T Consensus 254 ~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g-~~~~~~ 331 (536)
T PRK10946 254 VLAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAELG-CQLQQV 331 (536)
T ss_pred EECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhcC-CeEEEe
Confidence 9865 56788899999999999999999999998765 2222345789999999999999999998887775 899999
Q ss_pred ccccccccccccCCcCCCCCcCccCCCC-CCceEEEECCCCCccCCCC
Q 008848 504 CGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~g~~v~IlD~~g~~vp~Gv 550 (551)
||+||+++.............+++|+|+ +++.++|+|++|+++|+|.
T Consensus 332 YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~ 379 (536)
T PRK10946 332 FGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGE 379 (536)
T ss_pred ecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCC
Confidence 9999976543322211223457899999 7999999999999999885
No 85
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-40 Score=357.26 Aligned_cols=337 Identities=16% Similarity=0.122 Sum_probs=265.4
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+++.+. .+||+||.++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 22 ~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 93 (524)
T PRK06188 22 LKRYPDRPALVLGDT--------RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALH 93 (524)
T ss_pred HHHCCCCeEEEECCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEecc
Confidence 468999999998776 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
|..+.+++.+++++++++++++++... ................++...... . ..++...... ..
T Consensus 94 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~-~~ 157 (524)
T PRK06188 94 PLGSLDDHAYVLEDAGISTLIVDPAPF-----VERALALLARVPSLKHVLTLGPVP-------D---GVDLLAAAAK-FG 157 (524)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecchh-----hHHHHHHhhhcCCceEEEEeCCcc-------c---hhhHHHhhhc-cC
Confidence 999999999999999999999987521 011111111111111111111000 0 1111111100 00
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCE
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (551)
..... ....++++++|+|||||||.||||+++|+++.+........+++..++++++..|++|..+.. ++.+++.|++
T Consensus 158 ~~~~~-~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~ 235 (524)
T PRK06188 158 PAPLV-AAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRGGT 235 (524)
T ss_pred ccccc-ccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHHHHHcCCE
Confidence 01111 122346699999999999999999999999999888887888899999999999999987764 6778999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccc
Q 008848 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (551)
Q Consensus 425 lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (551)
+++.+ ..++..+++.|+++++|++.++|+++..|++.......+++++|.+++||++++++....+.+.++ ..+++.|
T Consensus 236 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~Y 313 (524)
T PRK06188 236 VIVLA-KFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFG-PIFAQYY 313 (524)
T ss_pred EEEcC-CCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhC-chhhhee
Confidence 99987 468899999999999999999999999998876555567899999999999999998887777765 6799999
Q ss_pred cccccccccccCCcC-----CCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 505 GGTELSSAYIQGSLL-----QPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 505 G~TE~~~~~~~~~~~-----~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
|+||++..+...... ......++|+|++|++++|+|++|+++|.|.
T Consensus 314 G~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~ 364 (524)
T PRK06188 314 GQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGE 364 (524)
T ss_pred CccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCC
Confidence 999997544433221 2235678999999999999999999999875
No 86
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.7e-41 Score=395.14 Aligned_cols=349 Identities=17% Similarity=0.171 Sum_probs=268.6
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+++++||++|+++..+ +++||+||+++++++|++|++.+++||+|+++++|++++++++|||+++|++++|++
T Consensus 624 ~a~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 696 (1146)
T PRK08633 624 TAKRNWSRLAVADSTG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGALANLALLLAGKVPVNLN 696 (1146)
T ss_pred HHHhcCCCcEEEcCCC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeC
Confidence 4578999999986432 289999999999999999975599999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC--CceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
|.++.+++.+++++++++++++++.+........ .....+ .+++.+...... ......+.+........
T Consensus 697 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 767 (1146)
T PRK08633 697 YTASEAALKSAIEQAQIKTVITSRKFLEKLKNKG----FDLELPENVKVIYLEDLKAK-----ISKVDKLTALLAARLLP 767 (1146)
T ss_pred CCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccC----CchhcccCceEEEeehhccc-----cchhHHHHHHHHhccCC
Confidence 9999999999999999999999875431110000 000011 112222111000 00011122221111000
Q ss_pred CC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHH-HHHHHH
Q 008848 343 PR-PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFL 420 (551)
Q Consensus 343 ~~-~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~ 420 (551)
.. ..........++|+++|+|||||||.||||+++|+++.+........++++++|++++..|+.|..+... ++.+++
T Consensus 768 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 847 (1146)
T PRK08633 768 ARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLL 847 (1146)
T ss_pred HHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHH
Confidence 00 0000012346789999999999999999999999999988887777888999999999999999988854 788999
Q ss_pred hCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCce
Q 008848 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (551)
Q Consensus 421 ~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (551)
.|+++++.+...++..+++.++++++|++.++|++++.+.+.....+.+++++|.+++|||++++++.+++++.++ +++
T Consensus 848 ~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g-~~~ 926 (1146)
T PRK08633 848 EGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKFG-IRI 926 (1146)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhC-CCe
Confidence 9999999876668899999999999999999999999998765555667899999999999999999999988875 899
Q ss_pred eccccccccccccccCCcC---------CCCCcCccCCCCCCceEEEEC-CCCCccCCCC
Q 008848 501 IESCGGTELSSAYIQGSLL---------QPQAFGAFSTATMTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~Gv 550 (551)
+|.||+||++..++...+. ...+.+++|+|+||++++|+| ++|+++|+|.
T Consensus 927 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~ 986 (1146)
T PRK08633 927 LEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGE 986 (1146)
T ss_pred ecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCC
Confidence 9999999987654432211 113467899999999999999 5689999885
No 87
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-40 Score=351.35 Aligned_cols=322 Identities=17% Similarity=0.176 Sum_probs=254.8
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+||++|+.+...+ +.+||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 4 ~a~~~p~~~a~~~~~~~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~ 77 (488)
T PRK09088 4 HARLQPQRLAAVDLALG------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPL 77 (488)
T ss_pred hhhhCCCceEEEecCCC------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEee
Confidence 34678999999863111 2899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
++.++.+++.+++++++++++++++...... . ....++++......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~----------------~----------------~~~~~~~~~~~~~~-- 123 (488)
T PRK09088 78 NWRLSASELDALLQDAEPRLLLGDDAVAAGR----------------T----------------DVEDLAAFIASADA-- 123 (488)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEcchhhccc----------------c----------------cccchhhhhhhccc--
Confidence 9999999999999999999999987532100 0 00112222111110
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHH-HHHHHHhC
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNG 422 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G 422 (551)
..........++++++++|||||||.||+|+++|+++............+..+|++++..|++|.++... ++.++..|
T Consensus 124 -~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g 202 (488)
T PRK09088 124 -LEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVG 202 (488)
T ss_pred -cccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcC
Confidence 0001112335678999999999999999999999999887776666667889999999999999988754 66778889
Q ss_pred CEEEEecCCCChhhHHHHHH--HcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCce
Q 008848 423 ATLALYQGSPLERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (551)
Q Consensus 423 ~~lvl~~~~~~~~~~~~~i~--~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (551)
+++++.+ ..++..++..+. ++++|++.++|++++.+.+.......++++||.+++||++++......+... ++++
T Consensus 203 ~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v 279 (488)
T PRK09088 203 GSILVSN-GFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPM 279 (488)
T ss_pred CEEEEcC-CCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCce
Confidence 9998865 467778888775 4899999999999999987654444567899999999999998887776654 4789
Q ss_pred eccccccccccccccCCc--CCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 501 IESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
++.||+||++..+..... ....+.+++|+|+++++++|+|++|+++|.|.
T Consensus 280 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~ 331 (488)
T PRK09088 280 VDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGV 331 (488)
T ss_pred eeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCC
Confidence 999999999864322111 11235678999999999999999999998874
No 88
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=344.61 Aligned_cols=343 Identities=17% Similarity=0.157 Sum_probs=265.2
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
.+..+|+.+++-+....+..+.++.+||.|..+++..+|..|+++ +++++.|||+.-|++||+++..||...|++.|||
T Consensus 84 ~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~Vpl 163 (691)
T KOG1256|consen 84 SVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPL 163 (691)
T ss_pred chhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeec
Confidence 347899999998776433457899999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhh--cCCCceEEecCCCCC-CCCCCC----CCCcchHHhh
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG--AAPLKAIVLPAIGND-VGIPLR----EQDLSWKDFL 336 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~--~~~~~~~vv~~~~~~-~~~~~~----~~~~~~~~~~ 336 (551)
...++++.+.+|+++++.++++++++- ....+-+... ..+..+.++...+.. ...... -...+|+++.
T Consensus 164 YdTlg~ea~~~Ii~~~e~~iv~vd~~~-----k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e~~ 238 (691)
T KOG1256|consen 164 YDTLGAEAVHYIINHAEISIVFVDNAK-----KAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDEFE 238 (691)
T ss_pred ccCCCHHHHHHHHHhcceeEEEEeCHH-----HHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHHHH
Confidence 999999999999999999999999641 1111212112 133333333322221 111111 2368899998
Q ss_pred ccCCCCCCCCCCCC-CCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh---h---hcCCCCCCEEEEecCcccc
Q 008848 337 SSVDYHPRPNYYSP-VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---A---HIDLKVGDVYCWPTNLGWV 409 (551)
Q Consensus 337 ~~~~~~~~~~~~~~-~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~---~~~~~~~d~~l~~~~~~~~ 409 (551)
..+... ...+ .+..|+|.|.|+|||||||.|||||+||+|++..+.... . .......|++++++|++|+
T Consensus 239 ~lG~~~----~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi 314 (691)
T KOG1256|consen 239 ELGKKN----QRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHI 314 (691)
T ss_pred hhcccc----cCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHHH
Confidence 887541 1222 466789999999999999999999999999988554211 1 1122346999999999999
Q ss_pred hhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhc----------------------Cc---
Q 008848 410 MGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT----------------------NC--- 464 (551)
Q Consensus 410 ~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~----------------------~~--- 464 (551)
+....-...+..|+++.++.+ |+..+.+.|++.++|++.++|.+|+.+.+. ..
T Consensus 315 ~er~~~~~~~~~G~~IgF~~g--D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~ 392 (691)
T KOG1256|consen 315 FERVVELYTFYIGAKIGFARG--DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHR 392 (691)
T ss_pred HHHHHHHhHhhcccEEEEecC--ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 998665566799999999874 667888899999999999999999887642 00
Q ss_pred -cCCCC-------------------CCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCc
Q 008848 465 -LEGLD-------------------WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAF 524 (551)
Q Consensus 465 -~~~~~-------------------l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 524 (551)
..... -..+|.+++|++|+++++...++..++ ++|+++||+|||++.++...+... ..
T Consensus 393 ~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g-~~v~eGYGlTEts~g~~~~~~~d~-~l 470 (691)
T KOG1256|consen 393 LMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG-CRVLEGYGLTETSAGTTLTLPGDN-VL 470 (691)
T ss_pred hhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC-ceeeecccccccCCceEeccCCCC-CC
Confidence 00000 135889999999999999999988765 899999999999955555444333 78
Q ss_pred CccCCCCCCceEEEEC
Q 008848 525 GAFSTATMTAGLVILD 540 (551)
Q Consensus 525 ~~iG~p~~g~~v~IlD 540 (551)
+++|.|+|+++++++|
T Consensus 471 gsvG~p~p~~~vKL~d 486 (691)
T KOG1256|consen 471 GSVGPPVPGNEVKLVD 486 (691)
T ss_pred CCcCCcccCceEEEec
Confidence 9999999999999977
No 89
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.5e-40 Score=351.51 Aligned_cols=333 Identities=18% Similarity=0.125 Sum_probs=251.3
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+|+++|+++.+.+ +++||+||+++++++|++|.++ +++||+|+++++|++++++++|||+++|++++|+
T Consensus 6 ~a~~~p~~~a~~~~~~~------~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 6 HAQIAPDRPAVIVAETG------EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhhCCCCcEEEecCCC------eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 45789999999874321 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
++.++++++.+++++++++++++++... .......... ...+.+.. . ......+++.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~-~~~~~~~~-~-------~~~~~~~~~~~~~~~~-- 142 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALD------GLAAKVGADL-PLRLSFGG-E-------IDGFGSFEAALAGAGP-- 142 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhh------hHHHHhhhcc-ceEEEecC-c-------ccccccHHHHhcccCC--
Confidence 9999999999999999999999976431 0111111000 00111110 0 0011223333221110
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe--cchhhHHHH----HHhhhhcCCCCCCEEEEecCcccchhhHHHHH
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPW--TQLSSIRCT----AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~--sh~~l~~~~----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (551)
.....+++++|+|||||||.||||++ +|+++.... ......+.+..++++++.+|++|+.++...+.
T Consensus 143 -------~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~ 215 (501)
T PRK13390 143 -------RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSM 215 (501)
T ss_pred -------CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHH
Confidence 01122357999999999999999995 566554321 11223467889999999999999988755555
Q ss_pred HHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHhc
Q 008848 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (551)
Q Consensus 418 ~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~ 495 (551)
.+..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+... ....+++++|.+++||+++++++.+.+.+.+
T Consensus 216 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~ 294 (501)
T PRK13390 216 VHALGGTVVLAK-RFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL 294 (501)
T ss_pred HHhcCceEEEcC-CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc
Confidence 678899998866 5688999999999999999999999998876432 2345678999999999999999988888766
Q ss_pred cCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+ .++++.||+||++.++...........+++|+|++| .++|+|++|+++|+|.
T Consensus 295 ~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~ 347 (501)
T PRK13390 295 G-PIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGR 347 (501)
T ss_pred C-CceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCC
Confidence 5 789999999999764333222223356789999999 7999999999999985
No 90
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.9e-40 Score=357.69 Aligned_cols=344 Identities=13% Similarity=0.125 Sum_probs=264.0
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+..+|+++|+++.+. .++.+||+||+++++++|++|++ . +++||+|+++++|+++++++++||+++|++++|+
T Consensus 20 a~~~~~~~a~~~~~~-----~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l 94 (576)
T PRK05620 20 STVHGDTTVTTWGGA-----EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPL 94 (576)
T ss_pred HHhCCCceEEEEcCC-----ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeec
Confidence 378999999987542 34689999999999999999986 7 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-c-eEEecCCCCCC---CCCCCCCCcchHHhhcc
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-K-AIVLPAIGNDV---GIPLREQDLSWKDFLSS 338 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~-~~vv~~~~~~~---~~~~~~~~~~~~~~~~~ 338 (551)
+|.++.+++.++++.++++++|+++.+. ..+..+....+. + ++++....... .........+|+++...
T Consensus 95 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 168 (576)
T PRK05620 95 NKQLMNDQIVHIINHAEDEVIVADPRLA------EQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDG 168 (576)
T ss_pred ccccCHHHHHHHHhccCCcEEEEChhhH------HHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhc
Confidence 9999999999999999999999987532 122222222222 2 22222111000 00011123457777653
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh--hhhcCCCCCCEEEEecCcccchhhHHHH
Q 008848 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG--WAHIDLKVGDVYCWPTNLGWVMGPVILF 416 (551)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (551)
... ........++++++++|||||||.||||+++|+++....... ...+.+..++++++.+|++|+.+....+
T Consensus 169 ~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~ 243 (576)
T PRK05620 169 RST-----VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVPL 243 (576)
T ss_pred CCC-----cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHHH
Confidence 221 112233567899999999999999999999999986544322 2346788999999999999999987788
Q ss_pred HHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhcc
Q 008848 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAW 496 (551)
Q Consensus 417 ~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~ 496 (551)
.++..|+++++.+..+++..+++.|+++++|++.++|+++..++........+..+||.+++||+++++++.+++...++
T Consensus 244 ~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~ 323 (576)
T PRK05620 244 AAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERYG 323 (576)
T ss_pred HHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHhC
Confidence 89999999998765668899999999999999999999999887653323334568999999999999999998887775
Q ss_pred CCceeccccccccccccccCCcCC-------CCCcCccCCCCCCceEEEECCCCCccC
Q 008848 497 YNAIIESCGGTELSSAYIQGSLLQ-------PQAFGAFSTATMTAGLVILDECGVPYV 547 (551)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~-------~~~~~~iG~p~~g~~v~IlD~~g~~vp 547 (551)
+++++.||+||++..++...+.. .....++|++.+|++++|+|+ |++++
T Consensus 324 -~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~ 379 (576)
T PRK05620 324 -VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVME 379 (576)
T ss_pred -CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-Ccccc
Confidence 78999999999986543322211 012347899999999999997 77664
No 91
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=5.2e-40 Score=356.56 Aligned_cols=346 Identities=18% Similarity=0.179 Sum_probs=261.9
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHH-hh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD-TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~-~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
++++|+++|+++.++ ++||+||.++++++|+.|+ +. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 35 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 35 VAKFADRPAYHSFGK--------TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNV 106 (560)
T ss_pred HHhCCCCceEEECCc--------eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEecc
Confidence 468899999998766 9999999999999999997 57 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCC-------------------CCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN-------------------DVGIP 324 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~-------------------~~~~~ 324 (551)
+|.++.+++.+++++++++++++++.+. .....+....+...+++..... .....
T Consensus 107 ~p~~~~~~~~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08751 107 NPLYTPRELKHQLIDSGASVLVVIDNFG------TTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEY 180 (560)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEcchhH------HHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhcccccc
Confidence 9999999999999999999999987532 1111111111211121110000 00000
Q ss_pred CCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcC----CCCC-CE
Q 008848 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID----LKVG-DV 399 (551)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~----~~~~-d~ 399 (551)
..+....+.+....... .........++++++++|||||||.||||+++|+++...+.+....+. +.++ ++
T Consensus 181 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08751 181 RINGAIRFREALALGRK----HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEV 256 (560)
T ss_pred CCCccccHHHHHhccCC----CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCce
Confidence 00112233333322211 111223346789999999999999999999999999877765544433 3344 56
Q ss_pred EEEecCcccchhhH-HHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEe
Q 008848 400 YCWPTNLGWVMGPV-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (551)
Q Consensus 400 ~l~~~~~~~~~~~~-~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~ 478 (551)
+++..++.|..+.. ..+.++..|++.++.....++..+++.|+++++|++..+|+++..+.+.......++++||.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~ 336 (560)
T PRK08751 257 VITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLG 336 (560)
T ss_pred EEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeee
Confidence 67778888887763 35667788998888765568889999999999999999999999998865555567889999999
Q ss_pred ecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
||+++++.+.+.+++.++ +++++.||+||++..++..........+++|+|++|++++|+|++|+++|.|.
T Consensus 337 gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~ 407 (560)
T PRK08751 337 GGMAVQRSVAERWKQVTG-LTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIGE 407 (560)
T ss_pred CCCCCCHHHHHHHHHHhC-CeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEECCCCCCCCCCC
Confidence 999999999988887664 78999999999986544332222344578999999999999999999999874
No 92
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=5.7e-40 Score=351.56 Aligned_cols=325 Identities=18% Similarity=0.167 Sum_probs=265.6
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+..+|+++|+.+.+. ++||+||.++++++|.+|.+. +++|++|+++++|+.++++++|||+++|++++|++
T Consensus 12 a~~~p~~~~~~~~~~--------~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~ 83 (503)
T PRK04813 12 AQTQPDFPAYDYLGE--------KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVD 83 (503)
T ss_pred HHhCCCceEEEeCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCC
Confidence 367899999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
+.++.+++.++++.++++++++++...... ..... ..++++...... .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~----------------~~~~~~~~~~~~--~ 131 (503)
T PRK04813 84 VSSPAERIEMIIEVAKPSLIIATEELPLEI--------------LGIPV----------------ITLDELKDIFAT--G 131 (503)
T ss_pred CCChHHHHHHHHHhcCCCEEEecccccccc--------------cCCcE----------------EehHHhhhhhhc--c
Confidence 999999999999999999999987531000 00000 111121111000 0
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCE
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (551)
..........++++++++|||||||.||||.++|+++.....+....+.+..+++++...|++|+.+.+.++.++..|++
T Consensus 132 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~ 211 (503)
T PRK04813 132 NPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGT 211 (503)
T ss_pred ccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCE
Confidence 00011223456889999999999999999999999999888877777889999999999999999998888899999999
Q ss_pred EEEecCC--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceec
Q 008848 425 LALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (551)
Q Consensus 425 lvl~~~~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (551)
+++++.. .++..+++.++++++|++..+|++++.+.........+++++|.++++|+++++.+.+++.+.++++++++
T Consensus 212 ~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~ 291 (503)
T PRK04813 212 LVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYN 291 (503)
T ss_pred EEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEe
Confidence 9998753 36788999999999999999999998876544344556889999999999999999999999987788999
Q ss_pred cccccccccccccCCc----CCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 503 SCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 503 ~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
.||+||++..++.... .......++|+|.+|++++|+|++|+++|.|.
T Consensus 292 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~ 343 (503)
T PRK04813 292 TYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGE 343 (503)
T ss_pred CcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCC
Confidence 9999998754332211 11234567999999999999999999999875
No 93
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-39 Score=349.97 Aligned_cols=340 Identities=20% Similarity=0.148 Sum_probs=258.0
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+++|+.+.++ .+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 12 ~a~~~p~~~a~~~~~~--------~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l 83 (533)
T PRK07798 12 VADAVPDRVALVCGDR--------RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNV 83 (533)
T ss_pred HHHhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEec
Confidence 4578999999999766 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc--eEEecCCCCCCCCCCCCCCcchHHhhccCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (551)
++.++.+++.++++++++++++++.... .....+....+.. ++.+..... .....+..+++++......
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 154 (533)
T PRK07798 84 NYRYVEDELRYLLDDSDAVALVYEREFA------PRVAEVLPRLPKLRTLVVVEDGSG---NDLLPGAVDYEDALAAGSP 154 (533)
T ss_pred CcCCCHHHHHHHHhhcCCCEEEEchhhH------HHHHHHhccCCCccEEEEecCCcc---cccCCccccHHHHHhccCC
Confidence 9999999999999999999999987532 1122222222211 222221111 0111134467776544322
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhh---------cCC------CCCCEEEEecCc
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---------IDL------KVGDVYCWPTNL 406 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~---------~~~------~~~d~~l~~~~~ 406 (551)
...... ..++.++|+|||||||.||||+++|+++.......... ..+ ..+++++...|+
T Consensus 155 -----~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 228 (533)
T PRK07798 155 -----ERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPL 228 (533)
T ss_pred -----cCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecch
Confidence 011111 22345799999999999999999999987654432211 111 577899999999
Q ss_pred ccchhhHHHHHHHHhCCEEEEecC-CCChhhHHHHHHHcCCcEEEecHHHHHH-HHhcCc-cCCCCCCCccEEEeecCCC
Q 008848 407 GWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKA-WRNTNC-LEGLDWTKIRSFASTGETS 483 (551)
Q Consensus 407 ~~~~~~~~~~~~l~~G~~lvl~~~-~~~~~~~~~~i~~~~vt~l~~~Ps~l~~-l~~~~~-~~~~~l~sLr~i~~gGe~l 483 (551)
.|+.+.+.++.+++.|+++++.+. .+++..+++.|+++++|++.++|..+.. +.+... ....+++++|.+++||+++
T Consensus 229 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~ 308 (533)
T PRK07798 229 MHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALF 308 (533)
T ss_pred hhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCC
Confidence 999999999999999999999873 4578899999999999999999876533 333221 2345678999999999999
Q ss_pred ChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccC--CCCCCceEEEECCCCCccCCCC
Q 008848 484 NVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS--TATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 484 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG--~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
++++.+++.+.+++..+++.||+||++.+....... ...+.| ++.++..++|+|++|+++++|.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~---~~~~~g~~~~~~~~~~~i~~~~~~~~~~g~ 374 (533)
T PRK07798 309 SPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAK---GAVHTGGPRFTIGPRTVVLDEDGNPVEPGS 374 (533)
T ss_pred CHHHHHHHHHHcCCCeEEeeecccccccccccCCCC---CCccCCCCccCCCceEEEECCCCCCCCCCC
Confidence 999999999888778999999999986543322111 112344 8889999999999999999874
No 94
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-39 Score=351.56 Aligned_cols=346 Identities=18% Similarity=0.178 Sum_probs=258.5
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
++++|+++|+++.+. .+||+||.++++++|.+|.+ . +++||+|+++++|++++++++|||+++|++++|+
T Consensus 33 a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 104 (560)
T PRK08974 33 VARYADQPAFINMGE--------VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNV 104 (560)
T ss_pred HHhCCCCceEEECCc--------cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEecc
Confidence 468999999998665 89999999999999999985 7 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCC-------------------CC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG-------------------IP 324 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-------------------~~ 324 (551)
+|.++.+++.+++++++++++++++.+. .....+........+++........ ..
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (560)
T PRK08974 105 NPLYTPRELEHQLNDSGAKAIVIVSNFA------HTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKY 178 (560)
T ss_pred CccCCHHHHHHHHHhcCceEEEEecccc------HHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccc
Confidence 9999999999999999999999987532 1122222111111111111000000 00
Q ss_pred CCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhc---CCCCCCEEE
Q 008848 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYC 401 (551)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l 401 (551)
..+...++.+....... .........++++++|+|||||||.||||+++|+++...+......+ ....+++++
T Consensus 179 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (560)
T PRK08974 179 HLPDAISFRSALHKGRR----MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVV 254 (560)
T ss_pred cCCCcccHHHHhhccCC----CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEE
Confidence 00011122222211111 01111224578999999999999999999999999987654433222 233456778
Q ss_pred EecCcccchhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeec
Q 008848 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (551)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gG 480 (551)
...|++|.++. ...+.++..|+++++.....++..+++.++++++|.+..+|++++.|.+.......+++++|.+++||
T Consensus 255 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg 334 (560)
T PRK08974 255 TALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGG 334 (560)
T ss_pred EeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecC
Confidence 88888887775 44666788999988875445778899999999999999999999999876544455678999999999
Q ss_pred CCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+++++.+..+|++.++ ++++|.||+||++..++.+........+++|+|++|++++|+|++|+++|.|.
T Consensus 335 ~~~~~~~~~~~~~~~g-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~ 403 (560)
T PRK08974 335 MAVQQAVAERWVKLTG-QYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGE 403 (560)
T ss_pred ccCCHHHHHHHHHHhC-CcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCC
Confidence 9999999888887654 89999999999886554443333344678999999999999999999999874
No 95
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-39 Score=349.90 Aligned_cols=319 Identities=16% Similarity=0.126 Sum_probs=245.6
Q ss_pred CCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 008848 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (551)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v-~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~ 265 (551)
..|+++|+++.+. .+||+||.++++++|++|.+. + ++||+|+++++|++++++++|||+++|++++|++|
T Consensus 13 ~~p~~~Al~~~~~--------~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p 84 (540)
T PRK13388 13 AGDDTIAVRYGDR--------TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNT 84 (540)
T ss_pred ccCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecc
Confidence 3699999998766 999999999999999999999 9 89999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCC
Q 008848 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (551)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (551)
.++.+++.+++++++++++|+++.... ....+. ......+++.. ..+.+++.....
T Consensus 85 ~~~~~~l~~~l~~~~~~~~i~~~~~~~------~~~~~~-~~~~~~i~~~~-------------~~~~~~~~~~~~---- 140 (540)
T PRK13388 85 TRRGAALAADIRRADCQLLVTDAEHRP------LLDGLD-LPGVRVLDVDT-------------PAYAELVAAAGA---- 140 (540)
T ss_pred cCChHHHHHHHHhcCCCEEEEChhhhH------HHHhhc-ccCceEEEccc-------------hhhhhhhccccC----
Confidence 999999999999999999999875321 111110 00112222210 123333321111
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHH-HHHHHHhCCE
Q 008848 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGAT 424 (551)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~~ 424 (551)
..+.....++++++|+|||||||+||||+++|+++.+........++++++|++++.+|++|..++.. ++.+|..|++
T Consensus 141 -~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 219 (540)
T PRK13388 141 -LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAA 219 (540)
T ss_pred -cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcE
Confidence 01112345789999999999999999999999999888877777889999999999999999988765 4457899999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccc
Q 008848 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (551)
Q Consensus 425 lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (551)
+++.+ .+++..+++.|+++++|++.++|+.+..++..........++++.+ + |++++++...++.+.++ ++++|.|
T Consensus 220 ~v~~~-~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~~-~~l~~~Y 295 (540)
T PRK13388 220 VALPA-KFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRFG-CQVEDGY 295 (540)
T ss_pred EEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHhC-Cceeccc
Confidence 98865 4678899999999999999999999998886543222223466643 3 55667777777777765 7899999
Q ss_pred cccccccccccCCcCCCCCcCccCCCCCCceEE-----------EECCCCCcc
Q 008848 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLV-----------ILDECGVPY 546 (551)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~-----------IlD~~g~~v 546 (551)
|+||++.+++.. . ....+++|+|++|++++ ++|++|+++
T Consensus 296 G~tE~~~~~~~~-~--~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~ 345 (540)
T PRK13388 296 GSSEGAVIVVRE-P--GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALL 345 (540)
T ss_pred ccccccceeecC-C--CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccc
Confidence 999998654322 1 23457899999998764 566666665
No 96
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.9e-39 Score=352.81 Aligned_cols=309 Identities=18% Similarity=0.189 Sum_probs=235.4
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++.+|+++|+++.+. ++||+||+++++++|++|.++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 24 ~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~ 95 (579)
T PLN03102 24 SECYPNRTSIIYGKT--------RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPIN 95 (579)
T ss_pred HHhCCCCeEEEECCc--------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeecc
Confidence 467999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcC-------CCceEEecCCCCCCCCCCCCCCcchHHhhc
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------PLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~-------~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 337 (551)
|.++.+++.++|+.++++++|+++.+. +....+.... ...++++....... .......+|+++..
T Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 167 (579)
T PLN03102 96 TRLDATSIAAILRHAKPKILFVDRSFE------PLAREVLHLLSSEDSNLNLPVIFIHEIDFPK--RPSSEELDYECLIQ 167 (579)
T ss_pred ccCCHHHHHHHHhccCCeEEEEChhhH------HHHHHHHhhccccccccCceEEEeccccccc--CCcccccCHHHHHh
Confidence 999999999999999999999987532 1122221111 11233332111100 00112345666554
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHH
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (551)
.................++++++|+|||||||.||||+++|+++..........+.+...+++++..|++|..+....+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 247 (579)
T PLN03102 168 RGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWG 247 (579)
T ss_pred ccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhHHHH
Confidence 33210000000011235689999999999999999999999997544433334455677789999999999888877778
Q ss_pred HHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccC
Q 008848 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (551)
Q Consensus 418 ~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~ 497 (551)
++..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.+++.. + +
T Consensus 248 ~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g 324 (579)
T PLN03102 248 TAARGGTSVCMR-HVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-G 324 (579)
T ss_pred HHHhcCcEEeec-cCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-C
Confidence 899999999886 457788999999999999999999999998764333334567888999999999998888764 4 4
Q ss_pred Cceecccccccccccc
Q 008848 498 NAIIESCGGTELSSAY 513 (551)
Q Consensus 498 ~~l~n~YG~TE~~~~~ 513 (551)
.++++.||+||+++.+
T Consensus 325 ~~i~~~YG~tE~~~~~ 340 (579)
T PLN03102 325 FQVMHAYGLTEATGPV 340 (579)
T ss_pred CeEEeecCccccCccc
Confidence 7899999999987543
No 97
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-39 Score=346.05 Aligned_cols=305 Identities=18% Similarity=0.116 Sum_probs=250.6
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~ 265 (551)
.++.++++|+++.++ ++||+||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|++|
T Consensus 10 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~ 77 (471)
T PRK07787 10 AAAADIADAVRIGGR--------VLSRSDLAGAATAVAERVA----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPP 77 (471)
T ss_pred hcccCCceEEEeCCc--------EEEHHHHHHHHHHHHHHhc----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCC
Confidence 367789999999777 9999999999999999986 5799999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCC
Q 008848 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (551)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (551)
..+.+++.++++++++++++++.... .. ..+...+.. ....+.
T Consensus 78 ~~~~~~l~~~l~~~~~~~il~~~~~~-----~~-------~~~~~~~~~-------------~~~~~~------------ 120 (471)
T PRK07787 78 DSGVAERRHILADSGAQAWLGPAPDD-----PA-------GLPHVPVRL-------------HARSWH------------ 120 (471)
T ss_pred CCChHHHHHHHHhcCCCEEEecCCcc-----cc-------cccceeeec-------------cccccc------------
Confidence 99999999999999999999976310 00 000000000 000000
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhH-HHHHHHHhCCE
Q 008848 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGAT 424 (551)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~~G~~ 424 (551)
......++++++|+|||||||.||||+++|+++...+......+++.+++++++..|+.|..+.+ .++.++..|++
T Consensus 121 ---~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 197 (471)
T PRK07787 121 ---RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNR 197 (471)
T ss_pred ---cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCE
Confidence 00123568999999999999999999999999998887777778899999999999999988874 58899999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccc
Q 008848 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (551)
Q Consensus 425 lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (551)
+++.+ .+++..+++.|+ +++|++.++|+++..|.+... ....++++|.+++||+++++++.+++.+.++ .+++|.|
T Consensus 198 ~~~~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~-~~~~~~Y 273 (471)
T PRK07787 198 FVHTG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-AARALRGARLLVSGSAALPVPVFDRLAALTG-HRPVERY 273 (471)
T ss_pred EEecC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-ccccccceeEEEECCCCCCHHHHHHHHHHcC-CCeeccc
Confidence 99875 568899999999 999999999999999886432 2345789999999999999999999887765 7899999
Q ss_pred cccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccC
Q 008848 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYV 547 (551)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp 547 (551)
|+||++...+. ........+++|+|++|++++|+|++|+++|
T Consensus 274 G~tE~~~~~~~-~~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~ 315 (471)
T PRK07787 274 GMTETLITLST-RADGERRPGWVGLPLAGVETRLVDEDGGPVP 315 (471)
T ss_pred CccccCcceec-CCCCcccCCcccccCCCcEEEEECCCCCCCC
Confidence 99998754322 2223345678999999999999999999987
No 98
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-39 Score=352.34 Aligned_cols=344 Identities=21% Similarity=0.241 Sum_probs=255.2
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+..+|+++|+++.+. .+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 34 a~~~p~~~a~~~~~~--------~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~ 105 (563)
T PRK06710 34 ASRYPEKKALHFLGK--------DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTN 105 (563)
T ss_pred HHHCCCceEEEecCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccC
Confidence 468999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCC---C---------------CC-
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG---I---------------PL- 325 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~---~---------------~~- 325 (551)
|.++.+++.++++.++++++++++.+.... ..+........+++........ . ..
T Consensus 106 p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 106 PLYTERELEYQLHDSGAKVILCLDLVFPRV------TNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred cccCHHHHHHHHhccCCeEEEEeccchhhh------hccchhhccceeEEeccccccccccccccchhhccccccccccc
Confidence 999999999999999999999987532111 1111100111111110000000 0 00
Q ss_pred -CCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh-hcCCCC-CCEEEE
Q 008848 326 -REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKV-GDVYCW 402 (551)
Q Consensus 326 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~-~d~~l~ 402 (551)
......|..+..... .........++++++++|||||||.||||+++|++++........ .+.... ++++++
T Consensus 180 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 180 ESETIHLWNSVEKEVN-----TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred ccchhhhhhhhhhccc-----cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 000001222111100 001111123578999999999999999999999998754432222 234433 457888
Q ss_pred ecCcccchhhH-HHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecC
Q 008848 403 PTNLGWVMGPV-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (551)
Q Consensus 403 ~~~~~~~~~~~-~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe 481 (551)
..|++|..+.. .++.+++.|+++++.+ .+++..+++.|+++++|++.++|+++..+++.......+++++|.+++||+
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~ 333 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIP-KFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSA 333 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcC-CCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCC
Confidence 99999988764 4567889999999876 468889999999999999999999999998765444556789999999999
Q ss_pred CCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEEC-CCCCccCCCC
Q 008848 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~Gv 550 (551)
++++++..++.+.++ ++++|.||+||++..............+++|+|.+++.++|+| ++++++|.|.
T Consensus 334 ~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~ 402 (563)
T PRK06710 334 PLPVEVQEKFETVTG-GKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGE 402 (563)
T ss_pred cCCHHHHHHHHHhhC-CCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCCC
Confidence 999999998887764 7899999999998643332222333457899999999999999 6789998874
No 99
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-39 Score=354.64 Aligned_cols=321 Identities=17% Similarity=0.151 Sum_probs=244.2
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++|+++|+++.++ .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 46 ~a~~~p~~~Ai~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l 117 (600)
T PRK08279 46 AAARHPDRPALLFEDQ--------SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALL 117 (600)
T ss_pred HHHhCCCCcEEEeCCC--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeec
Confidence 3478999999999776 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
++.++.+++.+++++++++++|+++... +....+...... ..+++...... .....|.++.......
T Consensus 118 ~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 185 (600)
T PRK08279 118 NTQQRGAVLAHSLNLVDAKHLIVGEELV------EAFEEARADLARPPRLWVAGGDTL------DDPEGYEDLAAAAAGA 185 (600)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEChHHH------HHHHHHhhhhcccceEEEecCccc------cccccHHHHhhhcccC
Confidence 9999999999999999999999987532 122222222221 22222211100 0012333433222110
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHH-HHHHHHh
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLN 421 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~ 421 (551)
+...........++++++|+|||||||.||||+++|+++++.+.+....++++++|++++..|++|.+++.. ++.++..
T Consensus 186 ~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 265 (600)
T PRK08279 186 PTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAA 265 (600)
T ss_pred CccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhc
Confidence 010011123345689999999999999999999999999999888777889999999999999999998865 4456777
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+++++.+ .+++..+++.++++++|++.++|++++.++...........++|.+ +|+.+++++++++...++...++
T Consensus 266 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~ 342 (600)
T PRK08279 266 GATLALRR-KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRIL 342 (600)
T ss_pred CcEEEEcC-CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceee
Confidence 77777755 5788899999999999999999999999887643333345677754 47789999999999888755799
Q ss_pred ccccccccccccccCCcCCCCCcCccCCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATM 532 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~ 532 (551)
|.||+||++..++. . ....+++|++.+
T Consensus 343 ~~YG~tE~~~~~~~--~--~~~~~~~g~~~~ 369 (600)
T PRK08279 343 EFYAASEGNVGFIN--V--FNFDGTVGRVPL 369 (600)
T ss_pred eeecccccceeecc--c--CCCCcccccccc
Confidence 99999998754322 1 223456776655
No 100
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=5.1e-39 Score=344.71 Aligned_cols=331 Identities=19% Similarity=0.157 Sum_probs=254.5
Q ss_pred eEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHH
Q 008848 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAARE 271 (551)
Q Consensus 193 ~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~ 271 (551)
.|++.+++ .+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.++
T Consensus 3 ~~~~~~~~--------~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 74 (509)
T PRK12406 3 ATIISGDR--------RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEE 74 (509)
T ss_pred eEEEECCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHH
Confidence 35666555 899999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCC--C-------CCC-CCCCCCCcchHHhhccCCC
Q 008848 272 IATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG--N-------DVG-IPLREQDLSWKDFLSSVDY 341 (551)
Q Consensus 272 l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~--~-------~~~-~~~~~~~~~~~~~~~~~~~ 341 (551)
+.++++++++++++++..... .+.+..+..+.++.... . ... .........|+++......
T Consensus 75 ~~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (509)
T PRK12406 75 IAYILEDSGARVLIAHADLLH---------GLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP 145 (509)
T ss_pred HHHHHhccCCcEEEEccchhh---------hhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCc
Confidence 999999999999999875321 11111111111110000 0 000 0011233455555432211
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH---HHHhhhhcCCCCCCEEEEecCcccchhhHHHHHH
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (551)
.....++++++++|||||||.||||+++|.+..+. .......+++.++++++...|++|..+....+.+
T Consensus 146 --------~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~ 217 (509)
T PRK12406 146 --------YDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRA 217 (509)
T ss_pred --------cCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHH
Confidence 11234689999999999999999999987654333 3333456788999999999999998887666678
Q ss_pred HHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHhcc
Q 008848 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW 496 (551)
Q Consensus 419 l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~ 496 (551)
+..|+++++.+ ..++..+++.++++++|++.++|+++..|++... ....+++++|.+++||+++++++.+++.+.++
T Consensus 218 ~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~ 296 (509)
T PRK12406 218 GRLGGVLVLQP-RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWG 296 (509)
T ss_pred HhhheEEEEcc-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcC
Confidence 89999998876 4688999999999999999999999999886432 23456889999999999999999999888765
Q ss_pred CCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 497 YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+.++|.||+||++.++..........++++|+|++|++++|+|++++++|.|.
T Consensus 297 -~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~ 349 (509)
T PRK12406 297 -PVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGE 349 (509)
T ss_pred -CcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCC
Confidence 78999999999986543322222345678999999999999999999998874
No 101
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-39 Score=349.80 Aligned_cols=364 Identities=19% Similarity=0.179 Sum_probs=266.1
Q ss_pred cCCCCcchhhhhhccccccCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH
Q 008848 167 WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR 245 (551)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e 245 (551)
|++....+..+.+ .. +++.+|+++|+.+.+. .+||+||+++++++|++|.+. +++|++|+++++|+++
T Consensus 27 ~~~~~~~~l~~~l-~~--~a~~~p~~~al~~~~~--------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~ 95 (567)
T PRK06178 27 EYPHGERPLTEYL-RA--WARERPQRPAIIFYGH--------VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ 95 (567)
T ss_pred CCCcCcccHHHHH-HH--HHHHCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH
Confidence 4444444443332 22 3467899999998776 899999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCC----
Q 008848 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDV---- 321 (551)
Q Consensus 246 ~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~---- 321 (551)
++++++||+++|++++|++|.++.+++.+++++++++++++++... +.+.++......+.+++.......
T Consensus 96 ~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~------~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 169 (567)
T PRK06178 96 FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA------PVVEQVRAETSLRHVIVTSLADVLPAEP 169 (567)
T ss_pred HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH------HHHHHhhccCCcceEEEecccccccccc
Confidence 9999999999999999999999999999999999999999987532 122222222222222221110000
Q ss_pred CCCCCC-------CCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh-hcC
Q 008848 322 GIPLRE-------QDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HID 393 (551)
Q Consensus 322 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~-~~~ 393 (551)
...... ....+.++...... ...........++++|+|+|||||||.||||+++|++++........ ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~ 247 (567)
T PRK06178 170 TLPLPDSLRAPRLAAAGAIDLLPALRA--CTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVV 247 (567)
T ss_pred ccccccccccccccccccccHHHHhhc--cccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhcc
Confidence 000000 00112222221111 00111122345789999999999999999999999998876544332 356
Q ss_pred CCCCCEEEEecCcccchhh-HHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCC
Q 008848 394 LKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (551)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~s 472 (551)
+.++|++++..|++|..+. ..++.++..|+++++.+ .+++..++..|+++++|.+.++|..+..+.+.......++++
T Consensus 248 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~ 326 (567)
T PRK06178 248 GGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA-RWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSS 326 (567)
T ss_pred CCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcch
Confidence 7889999999999998887 45788999999999987 578899999999999999999999999988765445556778
Q ss_pred ccEEEe--ecCCCChhhHHHHHHhccCCceeccccccccccccccCCcC--C----CCCcCccCCCCCCceEEEEC-CCC
Q 008848 473 IRSFAS--TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL--Q----PQAFGAFSTATMTAGLVILD-ECG 543 (551)
Q Consensus 473 Lr~i~~--gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~----~~~~~~iG~p~~g~~v~IlD-~~g 543 (551)
++.+.. +|+.+++++.+.+...++...+.+.||+||++..++..... . ...++++|+|++|++++|+| +++
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~ 406 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETG 406 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCC
Confidence 887644 45899999999988877644455789999987543322111 1 12456799999999999999 679
Q ss_pred CccCCCC
Q 008848 544 VPYVRTF 550 (551)
Q Consensus 544 ~~vp~Gv 550 (551)
+++|.|.
T Consensus 407 ~~~~~g~ 413 (567)
T PRK06178 407 ELLPLGA 413 (567)
T ss_pred CcCCCCC
Confidence 9998774
No 102
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.3e-39 Score=345.05 Aligned_cols=320 Identities=17% Similarity=0.134 Sum_probs=250.3
Q ss_pred CCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC
Q 008848 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (551)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~ 266 (551)
.++++|+++.+. ++||+||.++++++|++|+++ ++++++|+++++|++++++++|||+++|++++|+++.
T Consensus 16 ~~~~~a~~~~~~--------~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 87 (529)
T PRK07867 16 EDDDRGLYFEDS--------FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPT 87 (529)
T ss_pred ccCCceEEECCc--------EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCC
Confidence 378999998766 999999999999999999996 8899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCC
Q 008848 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (551)
Q Consensus 267 ~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (551)
++.+++.+++++++++++++++... .....+ .....++... ...|.+++..... .
T Consensus 88 ~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~----~~~~~~~~~~-----------~~~~~~~l~~~~~----~ 142 (529)
T PRK07867 88 RRGAALARDIAHADCQLVLTESAHA------ELLDGL----DPGVRVINVD-----------SPAWADELAAHRD----A 142 (529)
T ss_pred CChHHHHHHHHhCCCeEEEECHhHH------HHHHhh----ccCceEEEec-----------cccHHHHhcccCC----C
Confidence 9999999999999999999997542 111111 1111222111 1124444332211 1
Q ss_pred CCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHH-HHHHHHhCCEE
Q 008848 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATL 425 (551)
Q Consensus 347 ~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~~l 425 (551)
........++++++|+|||||||.||||+++|+++..........++++++|++++..|++|..+++. ++.++..|+++
T Consensus 143 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 222 (529)
T PRK07867 143 EPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASI 222 (529)
T ss_pred CCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceE
Confidence 11222346789999999999999999999999999888877777888999999999999999988754 56789999999
Q ss_pred EEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecccc
Q 008848 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (551)
Q Consensus 426 vl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (551)
++.+ .+++..+++.++++++|++.++|+.+..++..........+++|. ++||+++++.. .++.+.++ ++++|.||
T Consensus 223 ~~~~-~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~g-~~l~~~YG 298 (529)
T PRK07867 223 ALRR-KFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRFG-CVVVDGFG 298 (529)
T ss_pred EecC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHhC-CcEEEeec
Confidence 8875 568899999999999999999999999888654332233467885 56888887764 55666664 78999999
Q ss_pred ccccccccccCCcCCCCCcCccCCCCCCceEEEEC-CCCCccCCCC
Q 008848 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~Gv 550 (551)
+||+++.... .+ ....+++|+|++| ++|+| ++|+++|+|.
T Consensus 299 ~TE~~~~~~~-~~--~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~ 339 (529)
T PRK07867 299 STEGGVAITR-TP--DTPPGALGPLPPG--VAIVDPDTGTECPPAE 339 (529)
T ss_pred cccccccccc-CC--CCCCCCcCCCCCC--EEEEECCCCCCCCCCc
Confidence 9998754332 11 2345689999999 78888 5788888875
No 103
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-39 Score=368.77 Aligned_cols=336 Identities=16% Similarity=0.123 Sum_probs=245.3
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++++||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 456 ~a~~~pd~~Al~~~~~--------~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl 527 (994)
T PRK07868 456 QARDAPKGEFLLFDGR--------VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLM 527 (994)
T ss_pred HHHHCCCCeEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 5688999999998766 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCC--CCCcchHHhhccCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLR--EQDLSWKDFLSSVDY 341 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 341 (551)
+|. +++.++++++++++||+++... ..+.+ ....++++..... ...... .....++++......
T Consensus 528 ~p~---~~l~~il~~s~~~~li~~~~~~---------~~~~~-~~~~iiv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 593 (994)
T PRK07868 528 PPD---TDLAAAVRLGGVTEIITDPTNL---------EAARQ-LPGRVLVLGGGES-RDLDLPDDADVIDMEKIDPDAVE 593 (994)
T ss_pred CCc---hhHHHHHhccCCeEEEEChHHH---------HHHHh-cCceEEEecCCcc-ccccCCcchhhhhhhhcCccccc
Confidence 985 6899999999999999986532 11111 1223333321110 000000 001111111110000
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHh
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (551)
.+.........++|++||+|| ||||.||++.++|.+...........++++++|++++.+|++|+.+++..+.+++.
T Consensus 594 --~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~ 670 (994)
T PRK07868 594 --LPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVV 670 (994)
T ss_pred --CCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhc
Confidence 000001112236899999999 57788888888887655444444456788999999999999999999776666666
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|++.+++...+++..+++.|++++||++.++|++++.|++.......++++||.++ |+.+++++++++.+.++.++++
T Consensus 671 gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~ 748 (994)
T PRK07868 671 GGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVV 748 (994)
T ss_pred cceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchhee
Confidence 66665555567899999999999999999999999999876444445678999876 3348999999999888778899
Q ss_pred ccccccccccccccCCcCCCCCcCccCCCCCCc-eEEEE-----------CCCC--CccCCCC
Q 008848 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA-GLVIL-----------DECG--VPYVRTF 550 (551)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~-~v~Il-----------D~~g--~~vp~Gv 550 (551)
|.||+||++.... .. ...+.+++|+|++|+ +++|. |++| +++|+|.
T Consensus 749 ~~YG~TE~~~~~~-~~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge 808 (994)
T PRK07868 749 EFFATTDGQAVLA-NV--SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNE 808 (994)
T ss_pred eeeeccccccccc-cc--CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCC
Confidence 9999999875322 11 234567999999998 66653 5666 5666653
No 104
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-38 Score=341.65 Aligned_cols=337 Identities=19% Similarity=0.165 Sum_probs=258.4
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
.++++|+++|+++.+.+ +.+||+||+++++++|++|+++ +++|++|+++++|++++++++|||+++|++++|+
T Consensus 6 ~a~~~p~~~a~~~~~~~------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 6 HAQTTPDKPAVIMASTG------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hHhhCCCceEEEecCCC------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 35789999999874321 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCc--eEEecCCCCCCCCCCCCCCcchHHhhccCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (551)
++.++.+++.++++++++++++++.... .....+....... .+.+..... ......+++.......
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 147 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKL------DVARALLKQCPGVRHRLVLDGDGE------LEGFVGYAEAVAGLPA 147 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhH------HHHHHHHhcCCCceEEEEecCCCC------CcccccHHHHhcCCCC
Confidence 9999999999999999999999987531 1111222222211 122211110 0112223333321111
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec--chhhHH---HHHHhhhhcCCCCCCEEEEecCcccchhhHHHH
Q 008848 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT--QLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILF 416 (551)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~s--h~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (551)
....+.++.++++|||||||.||||+++ |.++.. ........+.+.+++++++..|++|+.+....+
T Consensus 148 --------~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~ 219 (511)
T PRK13391 148 --------TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVM 219 (511)
T ss_pred --------CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHH
Confidence 0112335679999999999999999964 665432 223334556788899999999999998887778
Q ss_pred HHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHh
Q 008848 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (551)
Q Consensus 417 ~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~ 494 (551)
.++..|+++++.+ .+++..+++.++++++|++.++|+++..+.+... ....+++++|.+++||+++++++.+++.+.
T Consensus 220 ~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~ 298 (511)
T PRK13391 220 LVIRLGGTVIVME-HFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDW 298 (511)
T ss_pred HHHHcCceEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHH
Confidence 8999999999976 5788999999999999999999999998876432 223468899999999999999999998887
Q ss_pred ccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 495 AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
++ ..+++.||+||++..+...........+++|+|++| .++|+|++|+++|.|.
T Consensus 299 ~g-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~ 352 (511)
T PRK13391 299 WG-PIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGE 352 (511)
T ss_pred cC-CceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCC
Confidence 65 789999999999865433322223456799999999 6999999999999874
No 105
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-39 Score=346.10 Aligned_cols=346 Identities=16% Similarity=0.127 Sum_probs=258.6
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+++.+|+++|++..+. ++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 19 ~a~~~p~~~a~~~~~~--------~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l 90 (540)
T PRK06164 19 HARARPDAVALIDEDR--------PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAV 90 (540)
T ss_pred HHHhCCCCeEEecCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEec
Confidence 3478999999996555 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhc----CC--CceEEecCCCCCCCCCCCCCCcchHHhhc
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA----AP--LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~----~~--~~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 337 (551)
++..+.+++.+++++++++++++++++.. .+....+... .. ..++++........ ......+.++..
T Consensus 91 ~~~~~~~~l~~~i~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 163 (540)
T PRK06164 91 NTRYRSHEVAHILGRGRARWLVVWPGFKG----IDFAAILAAVPPDALPPLRAIAVVDDAADATP---APAPGARVQLFA 163 (540)
T ss_pred CCCCCcHHHHHHHHhcCccEEEEcccccc----ccHHHHhhcccccccCCcceEEEeccCcccCC---CCCccccccccc
Confidence 99999999999999999999999876421 1111111110 01 11222221100000 000001111111
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHH
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (551)
..... ...........++++++++|||||||+||||+++|+++.+.+......+++.+++++++..|++|.+++..++.
T Consensus 164 ~~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 242 (540)
T PRK06164 164 LPDPA-PPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFSTLLG 242 (540)
T ss_pred ccccC-CcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHH
Confidence 11000 00000112234688999999999999999999999999988887778888999999999999999999988999
Q ss_pred HHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeec-CCCChhhHHHHHHhcc
Q 008848 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG-ETSNVDDDLWLSSKAW 496 (551)
Q Consensus 418 ~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gG-e~l~~~~~~~~~~~~~ 496 (551)
++..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+.. ....++++++.+..+| .+...++.+++...
T Consensus 243 ~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-- 318 (540)
T PRK06164 243 ALAGGAPLVCEP-VFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR-- 318 (540)
T ss_pred HHhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--
Confidence 999999999876 568889999999999999999999999998762 3345688999887776 44555566666554
Q ss_pred CCceeccccccccccccccCCcCC--CCCcCccCCCC-CCceEEEEC-CCCCccCCCC
Q 008848 497 YNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTAT-MTAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~-~g~~v~IlD-~~g~~vp~Gv 550 (551)
++++++.||+||++..++...... .....+.|.|+ +++.++|+| ++++++|.|.
T Consensus 319 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~ 376 (540)
T PRK06164 319 GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGE 376 (540)
T ss_pred CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCC
Confidence 478999999999986544433221 12334678876 899999999 5788998874
No 106
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=4.7e-38 Score=341.40 Aligned_cols=343 Identities=17% Similarity=0.157 Sum_probs=252.0
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
.++.+|+++|+.+.+. ++||+||+++++++|.+|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 29 ~~~~~p~~~a~~~~~~--------~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l 100 (567)
T PLN02479 29 AAVVHPTRKSVVHGSV--------RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCV 100 (567)
T ss_pred HHhhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEe
Confidence 3467999999998665 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhc---------CCCceEEecCCCCC---CCCCCCCCCcc
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---------APLKAIVLPAIGND---VGIPLREQDLS 331 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~---------~~~~~~vv~~~~~~---~~~~~~~~~~~ 331 (551)
+|.++.+++.+++++++++++++++.+. +....+... ....++++...... .......+...
T Consensus 101 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
T PLN02479 101 NIRLNAPTIAFLLEHSKSEVVMVDQEFF------TLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIE 174 (567)
T ss_pred ccccCHHHHHHHHhhcCceEEEEchhhh------hHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCccc
Confidence 9999999999999999999999987542 111111110 11122333211100 00011123445
Q ss_pred hHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchh
Q 008848 332 WKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMG 411 (551)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 411 (551)
|++++..... .. ........+++++++|||||||.||||+++|+++..........++++.++++++..|++|..+
T Consensus 175 ~~~~~~~~~~---~~-~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~ 250 (567)
T PLN02479 175 YEKFLETGDP---EF-AWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNG 250 (567)
T ss_pred HHHHHhcccc---cc-ccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhh
Confidence 6666543221 00 0111223456788999999999999999999998766555555677889999999999999888
Q ss_pred hHHHHH-HHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCC-CCCCCccEEEeecCCCChhhHH
Q 008848 412 PVILFS-SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG-LDWTKIRSFASTGETSNVDDDL 489 (551)
Q Consensus 412 ~~~~~~-~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~-~~l~sLr~i~~gGe~l~~~~~~ 489 (551)
....+. +++.|.++++ . .+++..+++.++++++|++.++|++++.|.+...... .++++++.++++|+++++.+.+
T Consensus 251 ~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~ 328 (567)
T PLN02479 251 WCFTWTLAALCGTNICL-R-QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLF 328 (567)
T ss_pred HHHHHHHHhhcCceEec-c-CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHH
Confidence 644443 4555555544 3 4688999999999999999999999999987543222 2578999999999999999988
Q ss_pred HHHHhccCCceeccccccccccccccCC--cC-------C-CCCcCccCCCCCCce-EEEEC-CCCCccCCC
Q 008848 490 WLSSKAWYNAIIESCGGTELSSAYIQGS--LL-------Q-PQAFGAFSTATMTAG-LVILD-ECGVPYVRT 549 (551)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~--~~-------~-~~~~~~iG~p~~g~~-v~IlD-~~g~~vp~G 549 (551)
++.+. +.++++.||+||+++.++... +. . .....++|.|.+|.+ ++|+| ++++++|.|
T Consensus 329 ~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~ 398 (567)
T PLN02479 329 AMSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPAD 398 (567)
T ss_pred HHHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCC
Confidence 88754 478999999999854322211 00 0 011245788888886 89999 568888753
No 107
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-38 Score=329.15 Aligned_cols=277 Identities=10% Similarity=0.072 Sum_probs=233.4
Q ss_pred EEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHH
Q 008848 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (551)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l 272 (551)
++++.++ ++||+||.++++++|++|. . +++|++|+|+++|++++++++|||+++|++++|+++..+.+++
T Consensus 1 ~~~~~~~--------~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~ 71 (414)
T PRK08308 1 MLIVNDE--------EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAA 71 (414)
T ss_pred CeEecCc--------eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHH
Confidence 3566665 9999999999999999985 6 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCC
Q 008848 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (551)
Q Consensus 273 ~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (551)
..++++++++++++++... . ... ...
T Consensus 72 ~~~~~~~~~~~~i~~~~~~------~---------------------------------~~~---------------~~~ 97 (414)
T PRK08308 72 IRMAKRAGCHGLLYGESDF------T---------------------------------KLE---------------AVN 97 (414)
T ss_pred HHHHHhCCCCEEEecCccc------c---------------------------------ccc---------------CCC
Confidence 9999999999999875210 0 000 001
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCEEEEecCC
Q 008848 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGS 431 (551)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~ 431 (551)
..+++++||+|||||||.||||+++|+++.+.+......+.+..+|+++...|++|+++. ..++.++..|+++++.+ .
T Consensus 98 ~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~ 176 (414)
T PRK08308 98 YLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-N 176 (414)
T ss_pred CCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-C
Confidence 245789999999999999999999999999888877777888899999999999999887 56888999999999976 4
Q ss_pred CChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecccccccccc
Q 008848 432 PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSS 511 (551)
Q Consensus 432 ~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~ 511 (551)
.++..+++.++++++|++.++|+++..|.+.... ..+++.+++||+++++++.+.+++. ..+++|.||+||++.
T Consensus 177 ~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~ 250 (414)
T PRK08308 177 KNPKFALNILRNTPQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGC 250 (414)
T ss_pred CCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCC
Confidence 6788999999999999999999999999865321 2368899999999999998888776 368999999999975
Q ss_pred ccccCCcCCCCCcCccCCCCCCceEEEECCCC
Q 008848 512 AYIQGSLLQPQAFGAFSTATMTAGLVILDECG 543 (551)
Q Consensus 512 ~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~g 543 (551)
... .. .....+++|+|++|+++++.++.+
T Consensus 251 ~~~-~~--~~~~~~~~G~p~~~~~~~~~~~~~ 279 (414)
T PRK08308 251 VSI-CP--DMKSHLDLGNPLPHVSVSAGSDEN 279 (414)
T ss_pred eee-cC--CCCCCCccCccCCCeEEEEecCCC
Confidence 332 11 123456899999999999986543
No 108
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=4.7e-38 Score=327.57 Aligned_cols=309 Identities=20% Similarity=0.163 Sum_probs=250.8
Q ss_pred cHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 211 TYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 211 TY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
||.||.++++++|++|.+ . +++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999999 7 99999999999999999999999999999999999999999999999999999999987
Q ss_pred ceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCC
Q 008848 289 FILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTT 368 (551)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTT 368 (551)
........ .......+.. .+......... .........++++++++||||||
T Consensus 81 ~~~~~~~~----------~~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTt 132 (408)
T TIGR01733 81 ALASRLAG----------LVLPIILVDP--------------LELAALDDAPA----PPPPDAPSGPDDLAYVIYTSGST 132 (408)
T ss_pred chhhhccc----------cCCceEEech--------------hhhhhcccccc----cccccCCCCCCCcEEEEEcCCCC
Confidence 64211110 0111111110 00011100000 00011113468899999999999
Q ss_pred CCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCC--hhhHHHHHHHcCC
Q 008848 369 GEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGV 446 (551)
Q Consensus 369 G~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~--~~~~~~~i~~~~v 446 (551)
|.||+|+++|+++.+........+.++++|++++..|++|..+++.++.++..|+++++++.... +..+.+.++++++
T Consensus 133 G~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (408)
T TIGR01733 133 GRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPV 212 (408)
T ss_pred CCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCc
Confidence 99999999999999888888788889999999999999999999889999999999999875433 6788999999999
Q ss_pred cEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcC--CCC--
Q 008848 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL--QPQ-- 522 (551)
Q Consensus 447 t~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~~~-- 522 (551)
|.+.++|++++.|.+... ..+++||.+++||+++++++.+++.+.++++.+++.||+||++..+...... ...
T Consensus 213 t~l~~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~ 289 (408)
T TIGR01733 213 TVLNLTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRE 289 (408)
T ss_pred eEEEeCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCc
Confidence 999999999999987643 4588999999999999999999999988778899999999998655322111 111
Q ss_pred CcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 523 AFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 523 ~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
+..++|+|+++++++|+|+++++++.|.
T Consensus 290 ~~~~~G~~~~~~~~~i~~~~~~~~~~g~ 317 (408)
T TIGR01733 290 SPVPIGRPLANTRLYVLDDDLRPVPVGV 317 (408)
T ss_pred cccccCcccCCceEEEECCCCCCCCCCC
Confidence 2678999999999999999999998873
No 109
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.4e-38 Score=370.37 Aligned_cols=331 Identities=18% Similarity=0.180 Sum_probs=253.8
Q ss_pred CCC-CCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 008848 187 RKE-DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (551)
Q Consensus 187 ~~~-pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~ 265 (551)
+++ |+++|+.+.+. +++||+||+++++++|++|++-+++||+|+++++|+++++++++||+++|++++|+||
T Consensus 642 ~~~~~~~~ai~~~~~-------~~~Ty~el~~~~~~lA~~L~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~ 714 (1140)
T PRK06814 642 KIHGFKKLAVEDPVN-------GPLTYRKLLTGAFVLGRKLKKNTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINF 714 (1140)
T ss_pred HHcCCCCeEeECCCC-------CccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCC
Confidence 455 46788876332 2899999999999999999633999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC--CceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
.++.+++.+++++++++++++++.+....+ .....+... ..++.++..... . .....+.+.......
T Consensus 715 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~--~---~~~~~~~~~~~~~~~-- 783 (1140)
T PRK06814 715 SAGIANILSACKAAQVKTVLTSRAFIEKAR----LGPLIEALEFGIRIIYLEDVRAQ--I---GLADKIKGLLAGRFP-- 783 (1140)
T ss_pred CCCHHHHHHHHHHcCCCEEEecHHHHhhhc----chhHHHHhccCceEEEehHhhcc--C---ChHHHHHHHhhccCC--
Confidence 999999999999999999999875431110 011111111 122222211100 0 000011111111110
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhC
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G 422 (551)
........++|+++|+|||||||.||||+++|+++.+........++++++|++++..|++|..+. ..++.++..|
T Consensus 784 ---~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 860 (1140)
T PRK06814 784 ---LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSG 860 (1140)
T ss_pred ---ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcC
Confidence 001113467999999999999999999999999999888877778889999999999999999887 6688899999
Q ss_pred CEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceec
Q 008848 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (551)
Q Consensus 423 ~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (551)
+++++.+...+...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|||++++++.+++.+.++ ++++|
T Consensus 861 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~-~~~~~ 937 (1140)
T PRK06814 861 VKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKFG-IRILE 937 (1140)
T ss_pred CEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHhC-CcEEe
Confidence 99999875456677889999999999999999999987653 3456889999999999999999998888775 78999
Q ss_pred cccccccccccccCCcCCCCCcCccCCCCCCceEEEECCC
Q 008848 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC 542 (551)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~~ 542 (551)
.||+||++..++.... ...+.+++|+|++|++++++|..
T Consensus 938 ~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~g~~~~~~~~~ 976 (1140)
T PRK06814 938 GYGVTETAPVIALNTP-MHNKAGTVGRLLPGIEYRLEPVP 976 (1140)
T ss_pred ccccccccceEEecCC-CCCCCCcCCccCCCCeEEEeecC
Confidence 9999999865443322 23456799999999999998754
No 110
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-37 Score=334.44 Aligned_cols=342 Identities=17% Similarity=0.136 Sum_probs=250.1
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++.+|+++|+.+.+. .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 28 ~~~~~~~~a~~~~~~--------~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 99 (545)
T PRK08162 28 AEVYPDRPAVIHGDR--------RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLN 99 (545)
T ss_pred HHHCCCCeEEEECCe--------EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEeccc
Confidence 368999999998765 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCC-ceEEecCCCCCCCCCCCCCCcchHHhhccCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (551)
|.++.+++.+++++++++.++++..+. ....+.....+. ..+++.............+..+++.+......
T Consensus 100 ~~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 171 (545)
T PRK08162 100 TRLDAASIAFMLRHGEAKVLIVDTEFA------EVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP-- 171 (545)
T ss_pred cccChHHHHHHHHhCCCeEEEEccchh------hHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCc--
Confidence 999999999999999999999987542 112222222222 23333321111000001123345555443211
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCC
Q 008848 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (551)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (551)
..........+++++|+|||||||.||||+++|+++..........+.+..++++++..|++|..+....+...+.|+
T Consensus 172 --~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g 249 (545)
T PRK08162 172 --DFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAG 249 (545)
T ss_pred --cccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHHcc
Confidence 001111223467899999999999999999999987666555555667888899999999999888654444445666
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecc
Q 008848 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (551)
Q Consensus 424 ~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (551)
+.++.. .+++..+++.|+++++|++.++|++++.|++........+.+.+.++++|+++++++.+++... ++++++.
T Consensus 250 ~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 326 (545)
T PRK08162 250 TNVCLR-KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHV 326 (545)
T ss_pred EEEEeC-CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeec
Confidence 666554 5788999999999999999999999999987644333345566777899999999988887653 4789999
Q ss_pred ccccccccccccCCcC------C----CCCcCccCCCCC-CceEEEECC-CCCccCC
Q 008848 504 CGGTELSSAYIQGSLL------Q----PQAFGAFSTATM-TAGLVILDE-CGVPYVR 548 (551)
Q Consensus 504 YG~TE~~~~~~~~~~~------~----~~~~~~iG~p~~-g~~v~IlD~-~g~~vp~ 548 (551)
||+||+++.+...... . .....++|.+.+ +..++|+|+ +++++|.
T Consensus 327 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~ 383 (545)
T PRK08162 327 YGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPA 383 (545)
T ss_pred ccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCC
Confidence 9999986433322110 0 112345677765 346899994 7888875
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-37 Score=333.40 Aligned_cols=318 Identities=19% Similarity=0.106 Sum_probs=246.3
Q ss_pred EecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEee
Q 008848 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~ 287 (551)
.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++++++++++++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999998
Q ss_pred cceeccCccccchhHHhhcCC--CceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecC
Q 008848 288 DFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSS 365 (551)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~--~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTS 365 (551)
+... .......+... ...+.+.... ......|++....... ......++.++++|||
T Consensus 91 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TS 149 (502)
T PRK08276 91 AALA------DTAAELAAELPAGVPLLLVVAGP-------VPGFRSYEEALAAQPD--------TPIADETAGADMLYSS 149 (502)
T ss_pred cchh------hHHHHHhhhccccccEEEEeCCC-------CCccccHHHHHhcCCC--------CCCCCCCcceEEEECC
Confidence 7532 11122222221 1222221110 0122345544332211 1122456789999999
Q ss_pred CCCCCCceEEecchhhHHHH------HHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHH
Q 008848 366 GTTGEPKAIPWTQLSSIRCT------AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK 439 (551)
Q Consensus 366 GTTG~PKgV~~sh~~l~~~~------~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~ 439 (551)
||||.||||+++|+++.... ...........++++++..|++|..+....+.++..|+++++.+ .+++..+++
T Consensus 150 GtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~ 228 (502)
T PRK08276 150 GTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME-KFDAEEALA 228 (502)
T ss_pred CCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC-CCCHHHHHH
Confidence 99999999999988754322 11222233357789999999999888876678999999998876 578899999
Q ss_pred HHHHcCCcEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCC
Q 008848 440 FVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGS 517 (551)
Q Consensus 440 ~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 517 (551)
.++++++|++.++|+++..+++... ....+++++|.+++||++++.++.+++.+.++ ..+++.||+||++..+....
T Consensus 229 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~-~~~~~~yG~tE~~~~~~~~~ 307 (502)
T PRK08276 229 LIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG-PIIHEYYASSEGGGVTVITS 307 (502)
T ss_pred HHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC-cHhhhhcccccccceeEecC
Confidence 9999999999999999999887543 23456889999999999999999999988775 67999999999986443332
Q ss_pred cCCCCCcCccCCCCCCceEEEECCCCCccCCCC
Q 008848 518 LLQPQAFGAFSTATMTAGLVILDECGVPYVRTF 550 (551)
Q Consensus 518 ~~~~~~~~~iG~p~~g~~v~IlD~~g~~vp~Gv 550 (551)
.......+++|+|+ ++.++|+|++++++|.|.
T Consensus 308 ~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~ 339 (502)
T PRK08276 308 EDWLAHPGSVGKAV-LGEVRILDEDGNELPPGE 339 (502)
T ss_pred ccccccCCCcceec-ccEEEEECCCCCCCcCCC
Confidence 22234557899999 889999999999998773
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-37 Score=338.63 Aligned_cols=331 Identities=18% Similarity=0.112 Sum_probs=245.8
Q ss_pred CCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 008848 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (551)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~ 265 (551)
+.+|+.+ ++..++ +.++.+||+||+++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|+|+
T Consensus 32 ~~~~~~~-~~~~~~----~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~ 106 (579)
T PRK09192 32 LGEAGMN-FYDRRG----QLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPL 106 (579)
T ss_pred ccCCceE-EEecCC----CEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccC
Confidence 4566554 443221 2346899999999999999999999 999999999999999999999999999999999987
Q ss_pred CCC-------HHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhcc
Q 008848 266 SFA-------AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (551)
Q Consensus 266 ~~~-------~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~ 338 (551)
.++ .+++.+++++++++++++++... +.......... ... ..+++++...
T Consensus 107 ~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~------~~~~~~~~~~~-~~~----------------~~~~~~~~~~ 163 (579)
T PRK09192 107 PMGFGGRESYIAQLRGMLASAQPAAIITPDELL------PWVNEATHGNP-LLH----------------VLSHAWFKAL 163 (579)
T ss_pred CcccccchHHHHHHHHHHHhcCCCEEEeChHHH------HHHHHhhcccc-ccc----------------eeehhhhccc
Confidence 553 68999999999999999987532 11111110000 001 1123333221
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh-hcCCCCCCEEEEecCcccchhhHH-HH
Q 008848 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKVGDVYCWPTNLGWVMGPVI-LF 416 (551)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~-~~ 416 (551)
... ........+++++||+|||||||.||||+++|++++..+..... .+++.++|+++++.|++|+.+... ++
T Consensus 164 ~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~ 238 (579)
T PRK09192 164 PEA-----DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLL 238 (579)
T ss_pred CCC-----ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHH
Confidence 111 01112345689999999999999999999999999888776666 788999999999999999999864 56
Q ss_pred HHHHhCCEEEEecC-C--CChhhHHHHHHHcCCcEEEecHHHHHHHHhcC---ccCCCCCCCccEEEeecCCCChhhHHH
Q 008848 417 SSFLNGATLALYQG-S--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN---CLEGLDWTKIRSFASTGETSNVDDDLW 490 (551)
Q Consensus 417 ~~l~~G~~lvl~~~-~--~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~---~~~~~~l~sLr~i~~gGe~l~~~~~~~ 490 (551)
.++..|+++++.+. . .++..+++.+.+++++++..+|.++..+.... .....+++++|.+++||+++++.+.+.
T Consensus 239 ~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~ 318 (579)
T PRK09192 239 TPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQ 318 (579)
T ss_pred HHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHH
Confidence 67899999977652 1 25778999999999998776665555544321 122356889999999999999999888
Q ss_pred HHHhccC-----CceeccccccccccccccCCcCC---------------------------CCCcCccCCCCCCceEEE
Q 008848 491 LSSKAWY-----NAIIESCGGTELSSAYIQGSLLQ---------------------------PQAFGAFSTATMTAGLVI 538 (551)
Q Consensus 491 ~~~~~~~-----~~l~n~YG~TE~~~~~~~~~~~~---------------------------~~~~~~iG~p~~g~~v~I 538 (551)
+.+.++. ..+++.||+||+++.++...... .....++|+|++|++++|
T Consensus 319 ~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i 398 (579)
T PRK09192 319 FAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEI 398 (579)
T ss_pred HHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEE
Confidence 8776531 35899999999976544322110 011257999999999999
Q ss_pred ECCCCCccCCCC
Q 008848 539 LDECGVPYVRTF 550 (551)
Q Consensus 539 lD~~g~~vp~Gv 550 (551)
+|++++++|.|.
T Consensus 399 ~d~~~~~~~~g~ 410 (579)
T PRK09192 399 RNEAGMPLPERV 410 (579)
T ss_pred ECCCCCCCCCCC
Confidence 999999998874
No 113
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.7e-37 Score=326.94 Aligned_cols=291 Identities=15% Similarity=0.177 Sum_probs=237.9
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
++++|+++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|+++++++++||+++|++++|++
T Consensus 13 a~~~~~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~ 84 (458)
T PRK09029 13 AQVRPQAIALRLNDE--------VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLN 84 (458)
T ss_pred HHhCCCceeeecCCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecC
Confidence 468999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCC
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (551)
+..+.+++..++++++++++++++.... ...+. ...+. ...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~~------------------------~~~~~----~~~---- 125 (458)
T PRK09029 85 PQLPQPLLEELLPSLTLDFALVLEGENT-------FSALT------------------------SLHLQ----LVE---- 125 (458)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCcccc-------hhhcc------------------------ccccc----ccc----
Confidence 9999999999999999999999875310 00000 00000 000
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCE
Q 008848 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (551)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (551)
........++++++++|||||||.||||+++|++++..+......+++.++|+++...|++|.++...++.+|+.|++
T Consensus 126 --~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~ 203 (458)
T PRK09029 126 --GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGAT 203 (458)
T ss_pred --ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCce
Confidence 011123457889999999999999999999999999888877777889999999999999999998767788999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccc
Q 008848 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (551)
Q Consensus 425 lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (551)
+++.+. ..+++.+. ++|.+.++|+++..+...... ..++|.+++||+++++.+.+++... +.++++.|
T Consensus 204 v~~~~~----~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~Y 271 (458)
T PRK09029 204 LVVRDK----QPLEQALA--GCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGY 271 (458)
T ss_pred EEeCCh----HHHHHHHh--hceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccc
Confidence 998663 45667773 799999999999988865322 3479999999999999998888754 48899999
Q ss_pred cccccccccccCCcCCCCCcCccCCCCCCceEEEEC
Q 008848 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540 (551)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD 540 (551)
|+||++...+... .....++|+|++|++++|+|
T Consensus 272 G~tE~~~~~~~~~---~~~~~~~G~~~~~~~~~i~~ 304 (458)
T PRK09029 272 GLTEMASTVCAKR---ADGLAGVGSPLPGREVKLVD 304 (458)
T ss_pred cccccCcceeccC---CCCCCCCCCCCCCCEEEEeC
Confidence 9999975433221 12235699999999999987
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-37 Score=334.20 Aligned_cols=327 Identities=17% Similarity=0.100 Sum_probs=250.3
Q ss_pred CCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+...|+.+|+...+. .+.+||.||+++++++|++|.+. +++||+|+|+++|+++++++++||+++|++++|++
T Consensus 12 ~~~~~~~~~~~~~~~------~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~ 85 (545)
T PRK07768 12 ARTSPRGMVTGEPDA------PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLH 85 (545)
T ss_pred hhCCCcceEEecCCC------ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccC
Confidence 456799998866443 24899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHH-------HHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhc
Q 008848 265 DSFAAREI-------ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (551)
Q Consensus 265 ~~~~~~~l-------~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 337 (551)
+..+.+++ .++++.++++.+++++..... ...+ ... . .....++++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~-~~~--~----------------~~~~~~~~l~~ 140 (545)
T PRK07768 86 QPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAA------APVL-EEK--G----------------IRVLTVADLLA 140 (545)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhh------hhhh-ccc--C----------------Cceeehhhhcc
Confidence 98886554 456777899999998753210 0000 000 0 01223445443
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCC-CEEEEecCcccchhhHH-H
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG-DVYCWPTNLGWVMGPVI-L 415 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~-~ 415 (551)
.... ......++++++|+|||||||+||||+++|++++.........+++.++ |++++..|++|+.+... +
T Consensus 141 ~~~~-------~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 213 (545)
T PRK07768 141 ADPI-------DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFL 213 (545)
T ss_pred cCCC-------CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHH
Confidence 2111 1223457899999999999999999999999998888777777788776 89999999999998854 5
Q ss_pred HHHHHhCCEEEEecCC---CChhhHHHHHHHcCCcEEEecHHHHHHHHhcC----ccCCCCCCCccEEEeecCCCChhhH
Q 008848 416 FSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----CLEGLDWTKIRSFASTGETSNVDDD 488 (551)
Q Consensus 416 ~~~l~~G~~lvl~~~~---~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~----~~~~~~l~sLr~i~~gGe~l~~~~~ 488 (551)
+.++..|+++++++.. .++..++++++++++|++..+|.++..+.+.. .....+++++|.+++||++++++..
T Consensus 214 ~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~ 293 (545)
T PRK07768 214 TVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADV 293 (545)
T ss_pred HHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHH
Confidence 6789999999987532 25678899999999999988888776665421 1124668899999999999999998
Q ss_pred HHHHHh---cc--CCceeccccccccccccccCCcCC-------------------------CCCcCccCCCCCCceEEE
Q 008848 489 LWLSSK---AW--YNAIIESCGGTELSSAYIQGSLLQ-------------------------PQAFGAFSTATMTAGLVI 538 (551)
Q Consensus 489 ~~~~~~---~~--~~~l~n~YG~TE~~~~~~~~~~~~-------------------------~~~~~~iG~p~~g~~v~I 538 (551)
+++.+. ++ ...+++.||+||++..++...... ....+++|+|++|++++|
T Consensus 294 ~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i 373 (545)
T PRK07768 294 EDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRV 373 (545)
T ss_pred HHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEE
Confidence 887653 33 235999999999976433221110 113458999999999999
Q ss_pred ECCCCCccCCCC
Q 008848 539 LDECGVPYVRTF 550 (551)
Q Consensus 539 lD~~g~~vp~Gv 550 (551)
+|++|+++++|.
T Consensus 374 ~~~~~~~~~~g~ 385 (545)
T PRK07768 374 VDEDGQVLPPRG 385 (545)
T ss_pred ECCCCCCCCCCC
Confidence 999999998873
No 115
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3.5e-37 Score=324.48 Aligned_cols=283 Identities=13% Similarity=0.034 Sum_probs=223.8
Q ss_pred EecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEe
Q 008848 209 LMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 286 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v-~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~ 286 (551)
-+.|+||+++++++|++|++. + ++|++|+++++|+++++++++||+++|++++|++|.++.+++++++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 478999999999999999999 7 67999999999999999999999999999999999999999999999999999998
Q ss_pred ecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCC
Q 008848 287 QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSG 366 (551)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSG 366 (551)
++.... . . . . . ... ......++++++++||||
T Consensus 99 ~~~~~~------~---~----------~-------------~-----~----~~~-------~~~~~~~~~~~~i~~TSG 130 (452)
T PRK07445 99 LDQLKL------S---H----------P-------------P-----P----LPS-------QGILPNLETGWIMIPTGG 130 (452)
T ss_pred cCcccc------c---c----------C-------------C-----C----CCc-------cccCCCCCCcEEEEeCCC
Confidence 764210 0 0 0 0 0 000 001124588999999999
Q ss_pred CCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCC
Q 008848 367 TTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGV 446 (551)
Q Consensus 367 TTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~v 446 (551)
|||.||||+++|+++...+.+....+++.+ ++.++..|++|.+++..++.+++.|+++++.+.. ..........++++
T Consensus 131 TTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~-~~~~~~~~~~~~~~ 208 (452)
T PRK07445 131 SSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYK-RLKSGQELPPNPSD 208 (452)
T ss_pred CCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChH-hccchhhhhhhcCc
Confidence 999999999999999887776666666655 4678889999999988888999999999997631 22222344567899
Q ss_pred cEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCC-CCCcC
Q 008848 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFG 525 (551)
Q Consensus 447 t~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~ 525 (551)
|++.++|++++.+.+.. ..++++||.+++||+++++++.+.+.. . +.+++|.||+||++..++...+.. ....+
T Consensus 209 t~~~~vP~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~ 283 (452)
T PRK07445 209 FFLSLVPTQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDDFLAGNN 283 (452)
T ss_pred eEEEehHHHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchhhccCCC
Confidence 99999999999988632 234789999999999999998887764 3 478999999999875433322211 12456
Q ss_pred ccCCCCCCceEEEEC-CCCCcc
Q 008848 526 AFSTATMTAGLVILD-ECGVPY 546 (551)
Q Consensus 526 ~iG~p~~g~~v~IlD-~~g~~v 546 (551)
++|+|++|++++|++ +.|+.+
T Consensus 284 ~~G~~~p~~~v~i~~g~~Gel~ 305 (452)
T PRK07445 284 SSGQVLPHAQITIPANQTGNIT 305 (452)
T ss_pred cCCccCCCCeEEEcCCCcceEE
Confidence 899999999999973 445543
No 116
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2e-36 Score=318.14 Aligned_cols=285 Identities=19% Similarity=0.216 Sum_probs=231.7
Q ss_pred cHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecc
Q 008848 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 211 TY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
||+||+++++++|+.|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 8999999999999999999 999999999999999999999999999999999999999999999999999999999875
Q ss_pred eeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 008848 290 ILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369 (551)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG 369 (551)
... ... . ...+.++...... ..........+++++++|||||||
T Consensus 81 ~~~--~~~--------------~----------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG 124 (436)
T TIGR01923 81 LEE--KDF--------------Q----------------ADSLDRIEAAGRY----ETSLSASFNMDQIATLMFTSGTTG 124 (436)
T ss_pred ccc--cce--------------e----------------ecchHhhhhcccc----cccccccCCcCceEEEEeCCCCCC
Confidence 310 000 0 0011111111110 001112345688999999999999
Q ss_pred CCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 008848 370 EPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (551)
Q Consensus 370 ~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l 449 (551)
.||||+++|+++...+.+....++++++|++++..|++|..++..++.++..|+++++.+. . ..+++.|+++++|++
T Consensus 125 ~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~-~--~~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 125 KPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDK-F--NQLLEMIANERVTHI 201 (436)
T ss_pred CCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecch-H--HHHHHHHHHhCCeEE
Confidence 9999999999999888888888899999999999999999888778899999999999763 2 388999999999999
Q ss_pred EecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCC
Q 008848 450 GTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFST 529 (551)
Q Consensus 450 ~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~ 529 (551)
.++|+++..|.+.... .+++|.+++|||++++++.++++.. +++++|.||+||++..++...........++|+
T Consensus 202 ~~~P~~l~~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 275 (436)
T TIGR01923 202 SLVPTQLNRLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHARPDVGR 275 (436)
T ss_pred EeHHHHHHHHHhCcCC----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccccccCCCc
Confidence 9999999999876432 2689999999999999998887653 588999999999976544333222222235999
Q ss_pred CCCCceEEE-EC
Q 008848 530 ATMTAGLVI-LD 540 (551)
Q Consensus 530 p~~g~~v~I-lD 540 (551)
|+++++++| .|
T Consensus 276 ~~~~~~~~i~~~ 287 (436)
T TIGR01923 276 PLAGREIKIKVD 287 (436)
T ss_pred cCCCcEEEEEeC
Confidence 999999999 55
No 117
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-36 Score=330.72 Aligned_cols=334 Identities=14% Similarity=0.131 Sum_probs=238.3
Q ss_pred CCCCCCceEEEEecCC-CCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 008848 186 RRKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 186 a~~~pd~~Al~~~~~~-~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~ 264 (551)
+..+|+++|+++.+.. ...+..+++||+||.++++++|++|.+.-++||+|+|+++|++++++++|||+++|++++|++
T Consensus 11 a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~ 90 (578)
T PRK05850 11 ASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGLEYIVAFLGALQAGLIAVPLS 90 (578)
T ss_pred HhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccHHHHHHHHHHcCceEEecC
Confidence 4689999999975421 111234589999999999999999998833799999999999999999999999999999999
Q ss_pred C---CCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcC---C-CceEEecCCCCCCCCCCCCCCcchHHhhc
Q 008848 265 D---SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---P-LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (551)
Q Consensus 265 ~---~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~---~-~~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 337 (551)
+ ..+.+++.++|++++++++++++.... ......... . ..++.+.. .++..
T Consensus 91 ~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~ 148 (578)
T PRK05850 91 VPQGGAHDERVSAVLRDTSPSVVLTTSAVVD------DVTEYVAPQPGQSAPPVIEVDL----------------LDLDS 148 (578)
T ss_pred CCCccchHHHHHHHHHhcCCCEEEEcHHHHH------HHHHHHhhcccccccceEeecc----------------ccccc
Confidence 7 457899999999999999999875321 111111000 0 01111100 00000
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhh-cC-----CCCCCEEEEecCcccchh
Q 008848 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-ID-----LKVGDVYCWPTNLGWVMG 411 (551)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~-~~-----~~~~d~~l~~~~~~~~~~ 411 (551)
.. ........++++++|+|||||||.||||+++|+++++.+...... +. ...++++++..|++|+.+
T Consensus 149 --~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 221 (578)
T PRK05850 149 --PR-----GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMG 221 (578)
T ss_pred --CC-----ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCch
Confidence 00 001123356899999999999999999999999998776544332 22 356789999999999998
Q ss_pred h-HHHHHHHHhCCEEEEecCC---CChhhHHHHHHHcCCcEEEecHHHH-HHHHhc---CccCCCCCCCccEEEeecCCC
Q 008848 412 P-VILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLV-KAWRNT---NCLEGLDWTKIRSFASTGETS 483 (551)
Q Consensus 412 ~-~~~~~~l~~G~~lvl~~~~---~~~~~~~~~i~~~~vt~l~~~Ps~l-~~l~~~---~~~~~~~l~sLr~i~~gGe~l 483 (551)
. ..++.+++.|+++++.+.. .++..+++++++++++.+ .+|+++ ..+... ......+++++|.+++||+++
T Consensus 222 ~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~ 300 (578)
T PRK05850 222 LVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERV 300 (578)
T ss_pred hHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCC
Confidence 7 4588999999999998632 267889999999999865 556554 333321 111234678999999999999
Q ss_pred ChhhHHHHHHhcc-----CCceeccccccccccccccCCcCCC------------------------CCcCccCCCCCCc
Q 008848 484 NVDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP------------------------QAFGAFSTATMTA 534 (551)
Q Consensus 484 ~~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~------------------------~~~~~iG~p~~g~ 534 (551)
++++.+++.+.++ ...+++.||+||++..+.......+ ....++|+|. +.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~ 379 (578)
T PRK05850 301 HPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SP 379 (578)
T ss_pred CHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CC
Confidence 9999988877653 2468999999998754332211100 0112456665 68
Q ss_pred eEEEECC-CCCccCCCC
Q 008848 535 GLVILDE-CGVPYVRTF 550 (551)
Q Consensus 535 ~v~IlD~-~g~~vp~Gv 550 (551)
+++|+|+ +++++|+|.
T Consensus 380 ~~~ivd~~~~~~~~~g~ 396 (578)
T PRK05850 380 TVRIVDPDTCIECPAGT 396 (578)
T ss_pred EEEEEcCCCCcCCCCCC
Confidence 9999994 588999884
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-36 Score=299.89 Aligned_cols=308 Identities=21% Similarity=0.172 Sum_probs=244.8
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
+|+++|+++|+++.+.. +++||+|++++++++|+.|..+ ++.||.|+++|+|++|++..+||.+|+|++..-|
T Consensus 86 ~vrr~p~k~aii~~~~~------~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~i 159 (649)
T KOG1179|consen 86 QVRRQPDKPAIIYEGPF------QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAFI 159 (649)
T ss_pred HHHhCCCccEEEEeCCC------ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeeee
Confidence 67899999999998741 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCC-CceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~-~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
+++...+-|.+-|.-++++.+|++.++.. ...++.+... ..+.+....... .+++..++...++....+
T Consensus 160 NtNlR~~~LlHsi~~s~aralv~~~el~~------~~~e~~~~l~~~~i~~~~~~~~~----~~~g~~~L~~~l~~~~~~ 229 (649)
T KOG1179|consen 160 NTNLRGEPLLHSITVSGARALVVGPELLN------ALEEILPLLIKNGIHVFSLGPTS----VPDGIESLLAKLSAAPKH 229 (649)
T ss_pred ccccccchhhhhhhhcCceEEEECHHHHH------HHHhcchhhhhccceEEecCCCC----CCchHHHHHHhhcccccC
Confidence 99999999999999999999999987531 1222211111 122232221111 112233333333333221
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHh
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~ 421 (551)
+.+ ........-.++++.||||||||.||..+++|.-+..........++++++|+++..+|++|.++. ..+..++..
T Consensus 230 ~vp-~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~ 308 (649)
T KOG1179|consen 230 PVP-VSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLH 308 (649)
T ss_pred CCC-cccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhc
Confidence 101 012234445789999999999999999999999887766656677899999999999999998775 678899999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCcee
Q 008848 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (551)
Q Consensus 422 G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (551)
|+|+|+-. +++...||+.+.+|++|+..-.--+.+.|++.+..+...-..+|..+--| +.++.++.|.++|+..+|.
T Consensus 309 GaT~Vlrk-KFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNG--LR~diW~~Fv~RFg~~~Ig 385 (649)
T KOG1179|consen 309 GATVVLRK-KFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNG--LRPDIWQQFVKRFGIIKIG 385 (649)
T ss_pred CceEEEec-ccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCC--CCchHHHHHHHHcCCCeEE
Confidence 99999965 78999999999999999999999999999998766555567888876444 7799999999999977899
Q ss_pred ccccccccccc
Q 008848 502 ESCGGTELSSA 512 (551)
Q Consensus 502 n~YG~TE~~~~ 512 (551)
+.||+||....
T Consensus 386 E~YgaTEgn~~ 396 (649)
T KOG1179|consen 386 EFYGATEGNSN 396 (649)
T ss_pred EEeccccCcce
Confidence 99999998754
No 119
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-35 Score=291.75 Aligned_cols=332 Identities=17% Similarity=0.167 Sum_probs=253.1
Q ss_pred CCceEecHHHHHHHHHHHHHHHHhh-cCCCCE-EEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCce
Q 008848 205 SAVNLMTYKELREQVMLVANALDTM-FSKGDA-IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAK 282 (551)
Q Consensus 205 ~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~-V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~ 282 (551)
+++..+||.|+.+++.++|++|.+. ++++++ |+|+++.+.+|+++.+||++.+...|.+...+..+-+.+-|++++++
T Consensus 85 g~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~ 164 (678)
T KOG1180|consen 85 GDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETEST 164 (678)
T ss_pred cceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccce
Confidence 4667999999999999999999999 997666 99999999999999999999999999999999999999999999999
Q ss_pred EEEeecceeccCccccchhHHhhcCCCceEEecCCC--CCC---CCC----CCCCCcchHHhhccCCCCCCCCCCCCCCC
Q 008848 283 GIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG--NDV---GIP----LREQDLSWKDFLSSVDYHPRPNYYSPVYN 353 (551)
Q Consensus 283 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~--~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (551)
.|+|+.+. ++.+......++....++.... ... ... .+....++++++..+.... .++.+.
T Consensus 165 ~i~T~~~L------L~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~----~~~~~P 234 (678)
T KOG1180|consen 165 AIFTDSEL------LPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE----IPPHPP 234 (678)
T ss_pred EEEeCHHH------HHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC----CCCCCC
Confidence 99999864 2333334444444444444332 111 111 1234577888888776521 233444
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhc-CCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~ 432 (551)
.|+|+|.|||||||||.|||||++|+|+++.+....... .+++.|+++.++|++|..-+..=+.++..|+++=..+...
T Consensus 235 ~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~T 314 (678)
T KOG1180|consen 235 KPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLT 314 (678)
T ss_pred CCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcce
Confidence 779999999999999999999999999999887766655 6899999999999999988865567889999886644221
Q ss_pred --C-hhh----HHHHHHHcCCcEEEecHHHHHHHHhcC------------------------ccC---------------
Q 008848 433 --L-ERS----FGKFVQDAGVTVLGTVPSLVKAWRNTN------------------------CLE--------------- 466 (551)
Q Consensus 433 --~-~~~----~~~~i~~~~vt~l~~~Ps~l~~l~~~~------------------------~~~--------------- 466 (551)
| ... --..+...++|+|.++|.++.++.+.. ...
T Consensus 315 Ltdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFk 394 (678)
T KOG1180|consen 315 LTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFK 394 (678)
T ss_pred ecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHH
Confidence 1 111 123466889999999999998775430 000
Q ss_pred ---CCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEEC-C-
Q 008848 467 ---GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-E- 541 (551)
Q Consensus 467 ---~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD-~- 541 (551)
..--..||.+++||+|++++..+.+-..+. +++.++||.||++...+...+. .-..+.+|.|++-++++++| +
T Consensus 395 KIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C-~Pv~qGYGLTEtca~~tv~e~~-d~~~g~vG~pl~c~eiKLvdw~E 472 (678)
T KOG1180|consen 395 KIRALLGGNLRYILSGGAPLSPDTQRFMNICFC-CPVLQGYGLTETCAAATVLEPE-DFSTGRVGAPLPCCEIKLVDWEE 472 (678)
T ss_pred HHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcc-ccccccccccchhcccEecChh-hcccccccCCccceEEEEEEhhh
Confidence 001136999999999999999887766654 7999999999998765544432 33457899999999999999 3
Q ss_pred -----CCCccCCC
Q 008848 542 -----CGVPYVRT 549 (551)
Q Consensus 542 -----~g~~vp~G 549 (551)
.++| |.|
T Consensus 473 gGY~~~~~P-PrG 484 (678)
T KOG1180|consen 473 GGYFAKNKP-PRG 484 (678)
T ss_pred cCccCCCCC-CCc
Confidence 2466 766
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.4e-33 Score=320.51 Aligned_cols=326 Identities=12% Similarity=0.063 Sum_probs=232.7
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl 263 (551)
.++++|+++|+.+... .+.++.+||+|+.++++++|++|+++ +++||+|+|+++|++||+++.+||+++|++.||+
T Consensus 436 ~a~~~pd~~al~~~~~---~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPl 512 (1452)
T PTZ00297 436 SVTRHSTFRCLGQTSE---SGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPL 512 (1452)
T ss_pred HHHHCCCCeEEEEecc---CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeC
Confidence 3478899999974311 13456899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCC-CC-CCC--CCCCCcchHHhhccC
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN-DV-GIP--LREQDLSWKDFLSSV 339 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~-~~-~~~--~~~~~~~~~~~~~~~ 339 (551)
++ +.+++.+++++++++++|++.... +.+..+....-..+++++.... .. ... ......+|++++..+
T Consensus 513 y~--t~~eL~yIL~~S~akvVfv~~~~l------~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G 584 (1452)
T PTZ00297 513 VG--KGSTMRTLIDEHKIKVVFADRNSV------AAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKG 584 (1452)
T ss_pred CC--CHHHHHHHHHhcCCcEEEEchhHH------HHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcC
Confidence 75 467999999999999999986432 1122221111122333321100 00 000 011245688888765
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEe---cCCCCCCCceEEecchhhHHHHHHhhhhc---CCCCCCEEEEecCcccchhhH
Q 008848 340 DYHPRPNYYSPVYNPVDAVVNILF---SSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYCWPTNLGWVMGPV 413 (551)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~iiy---TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~~~~~~~~~~ 413 (551)
... . ........++|++.|+| ||||||.||||++||+|++..+....... ...++|++++++|++|..+..
T Consensus 585 ~~~--~-~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~ 661 (1452)
T PTZ00297 585 RLC--P-VPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRV 661 (1452)
T ss_pred ccc--C-ccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHH
Confidence 321 1 11122346789999996 99999999999999999998887654322 456789999999999998876
Q ss_pred HHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCcc--------------------------CC
Q 008848 414 ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--------------------------EG 467 (551)
Q Consensus 414 ~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--------------------------~~ 467 (551)
..+.+++.|+++.. +++..+++.|+++++|++.++|+++..+.+.... ..
T Consensus 662 ~~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~ 737 (1452)
T PTZ00297 662 FVLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHR 737 (1452)
T ss_pred HHHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 66778999999864 3578999999999999999999999877542100 00
Q ss_pred CC----------------CCCccEEEeecC--CCChhhHHHHHHhccCCceeccccccccccccccCCcCCCCCcCccCC
Q 008848 468 LD----------------WTKIRSFASTGE--TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFST 529 (551)
Q Consensus 468 ~~----------------l~sLr~i~~gGe--~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~ 529 (551)
.. -..+|.+++||. +++..+. . ++++..+||.||+. +...+ ......|+
T Consensus 738 ~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~-----~--~i~i~~g~glTE~~---~~~~~---~~~~~~G~ 804 (1452)
T PTZ00297 738 RDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL-----E--HISVCYVPCLREVF---FLPSE---GVFCVDGT 804 (1452)
T ss_pred CCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----C--CceEEEecceEEee---eecCC---CCcccCCe
Confidence 00 036888998873 4443222 2 46788899999953 22222 12223499
Q ss_pred CCCCceEEEECC
Q 008848 530 ATMTAGLVILDE 541 (551)
Q Consensus 530 p~~g~~v~IlD~ 541 (551)
|+||++++|.|.
T Consensus 805 PlpgvEvKI~~~ 816 (1452)
T PTZ00297 805 PAPSLQVDLEPF 816 (1452)
T ss_pred ecCceEEEEccc
Confidence 999999999863
No 121
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=5e-26 Score=215.80 Aligned_cols=217 Identities=16% Similarity=0.131 Sum_probs=159.1
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
+++++|+++|+++.+++ .++.+++||+||.++++++|+.|++ . +++||+|+|+++|+++++++++||+++|++++|
T Consensus 5 ~~~~~p~~~al~~~~~~--~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp 82 (227)
T TIGR03089 5 LLAADPASPRLTFYDDA--TGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVL 82 (227)
T ss_pred hhhhCCCCcEEEEEcCC--CCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEe
Confidence 34688999999864321 1123579999999999999999998 8 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCC--CCCCCCCCCCCCcchHHhhccCC
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI--GNDVGIPLREQDLSWKDFLSSVD 340 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~--~~~~~~~~~~~~~~~~~~~~~~~ 340 (551)
++ +++++++|+++++... + . ....++.+... ..........+..+|.+......
T Consensus 83 ~n-------------~s~a~~~v~~~~~~~~---------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (227)
T TIGR03089 83 AG-------------DPDADVVVTGPDRLAA---------A-A-GSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHG 138 (227)
T ss_pred CC-------------CCCCCEEEeCcchhhh---------c-c-cCCceEEEeccccccCCCCCCCCcccchhhhhhccC
Confidence 94 7899999998865321 1 0 11222332110 00000001123345555444322
Q ss_pred CCCCCCCCCCC-CCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHHHHH
Q 008848 341 YHPRPNYYSPV-YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (551)
Q Consensus 341 ~~~~~~~~~~~-~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (551)
. ...+. ...++|++.|+||||+ +|++++... ...+++++|+++ .+|++|..++ ..++.+
T Consensus 139 ~-----~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~ 199 (227)
T TIGR03089 139 D-----QFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAP 199 (227)
T ss_pred C-----CCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHH
Confidence 1 11112 3456899999999986 666655443 456789999999 9999999998 468899
Q ss_pred HHhCCEEEEecCCCChhhHHHHHHHcCCc
Q 008848 419 FLNGATLALYQGSPLERSFGKFVQDAGVT 447 (551)
Q Consensus 419 l~~G~~lvl~~~~~~~~~~~~~i~~~~vt 447 (551)
|..|+++++++ ++++..+++.|+++|||
T Consensus 200 l~~G~t~v~~~-rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 200 LAAGGSLVLVT-HPDPARLDQIAETERVT 227 (227)
T ss_pred hccCceEEEec-CCCHHHHHHHHHhhcCC
Confidence 99999999996 78999999999999997
No 122
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.88 E-value=1.4e-21 Score=199.92 Aligned_cols=171 Identities=13% Similarity=0.072 Sum_probs=139.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEe--cCC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY--QGS 431 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~--~~~ 431 (551)
.++++++|+|||||||.||||+++|+++.+........+ ...++++...|++|..++..++.+++.|++++++ ...
T Consensus 33 ~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~~ 110 (358)
T PRK07824 33 IDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSAG 110 (358)
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCCC
Confidence 468999999999999999999999999988776554433 3557888999999999988788899999999884 345
Q ss_pred CChhhHHHHHHHcC--CcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecccccccc
Q 008848 432 PLERSFGKFVQDAG--VTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTEL 509 (551)
Q Consensus 432 ~~~~~~~~~i~~~~--vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~ 509 (551)
+++..+++.+++++ +++...+|+.+..++.... ...+++++|.+++||+++++++.+++.+. +++++|.||+||+
T Consensus 111 ~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~TE~ 187 (358)
T PRK07824 111 FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGMSET 187 (358)
T ss_pred cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccCCcc
Confidence 67889999999998 5667778998887765432 23457899999999999999998888753 4899999999998
Q ss_pred ccccccCCcCCCCCcCccCCCCCCceEEEEC
Q 008848 510 SSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540 (551)
Q Consensus 510 ~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD 540 (551)
+..+ ...|+|++|++++|.|
T Consensus 188 ~~~~-----------~~~G~~~~g~~v~i~~ 207 (358)
T PRK07824 188 SGGC-----------VYDGVPLDGVRVRVED 207 (358)
T ss_pred CCCc-----------CcCceeCCCCEEEecC
Confidence 6532 1358999999999954
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.88 E-value=9.4e-22 Score=201.33 Aligned_cols=168 Identities=10% Similarity=0.018 Sum_probs=131.9
Q ss_pred CCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCC--CCEEEEecCcccchhh-HHHHHHHHhCCEEEEecCCC
Q 008848 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV--GDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSP 432 (551)
Q Consensus 356 ~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~~ 432 (551)
+..++++|||||||.||||+++|+++.+........++++. .+++++..|++|..+. +.++.++..|+++++.+ .+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CC
Confidence 45789999999999999999999999988877666666643 4689999999998776 56788999999999876 46
Q ss_pred ChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccccccccc
Q 008848 433 LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSA 512 (551)
Q Consensus 433 ~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~ 512 (551)
++..+++.++.+ |++.++|++++.|.+.. .++++++. ++||+++++++++.+.+. +..+++|.||+||++..
T Consensus 174 ~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 677788777643 89999999999997642 34778886 678999999999988765 32469999999998764
Q ss_pred cccCCcCCCCCcCccCCCCCCceEEE
Q 008848 513 YIQGSLLQPQAFGAFSTATMTAGLVI 538 (551)
Q Consensus 513 ~~~~~~~~~~~~~~iG~p~~g~~v~I 538 (551)
.+... +...|+|+|+.++.+
T Consensus 246 ~~~~~------~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 246 GLREA------PDDPFRLLPDLACFA 265 (386)
T ss_pred ccccC------CCCCcccCCCccccC
Confidence 32211 224578888887765
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.85 E-value=2.5e-20 Score=194.99 Aligned_cols=191 Identities=17% Similarity=0.085 Sum_probs=141.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCEEEEec
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl~~ 429 (551)
+.+++++++|||||||.||+|+++|+++..... .....++++++|++++..++++..+. ...+.++..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 456889999999999999999999998765432 22334688899999887666654333 33566788899988766
Q ss_pred CCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCC--CCCCccEEEeecCCCChhhHHHHHHhccCCceecccccc
Q 008848 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (551)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~--~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (551)
. .++..+++.|+++++|++.++|+++..|++....... ...++|.+++|||+++++..+.+.+.++ ++++|.||+|
T Consensus 153 ~-~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g-~~v~~~YG~t 230 (422)
T TIGR02155 153 G-GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG-MKATDIYGLS 230 (422)
T ss_pred C-CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC-CceEecccch
Confidence 3 3568899999999999999999999988764322222 2358999999999999999988888876 8999999999
Q ss_pred ccccccccCCcCCCCCcCccCCCCC--CceEEEEC-CCCCccCCCC
Q 008848 508 ELSSAYIQGSLLQPQAFGAFSTATM--TAGLVILD-ECGVPYVRTF 550 (551)
Q Consensus 508 E~~~~~~~~~~~~~~~~~~iG~p~~--g~~v~IlD-~~g~~vp~Gv 550 (551)
|+++..+..... . ...|.+++ +..+.|+| ++|+++|+|.
T Consensus 231 E~~~~~~~~~~~-~---~~~g~~~~~~~~~~eivd~~~g~~v~~Ge 272 (422)
T TIGR02155 231 EVIGPGVAMECV-E---TQDGLHIWEDHFYPEIIDPHTGEVLPDGE 272 (422)
T ss_pred hhcCCceeeccc-c---cCCCceEecCeeEEEEECCCCCCCCCCCC
Confidence 985211111110 0 11234443 56778999 5899999884
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.80 E-value=1.1e-18 Score=182.97 Aligned_cols=186 Identities=14% Similarity=0.010 Sum_probs=138.2
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh---hcCCCCCCEEEEecCcccchhhHH-HHHHHHhCCEEEEe
Q 008848 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALY 428 (551)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~~lvl~ 428 (551)
.+.++++.|.|||||||+||+|+++|+++......... ..+++++|+++...+++++.+.+. .++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 35578999999999999999999999998765543332 358899999999999888777644 35567788876532
Q ss_pred cCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCC--CCCCCccEEEeecCCCChhhHHHHHHhccCCceeccccc
Q 008848 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGG 506 (551)
Q Consensus 429 ~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~--~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 506 (551)
. . ....++.|+++++|++..+|+.+..|.+...... ...+++|.+++|||+++++..+++.+.++ ++++|.||+
T Consensus 163 ~-~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g-~~v~~~YG~ 238 (445)
T TIGR03335 163 G-K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWG-CEVYNTYGS 238 (445)
T ss_pred C-c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhC-CcEEecCCh
Confidence 2 2 2456889999999999999998877765322211 12468999999999999998888887775 899999999
Q ss_pred cccccccccCCcCCCCCcCccCCCC--CCceEEEECCC-CCccCCCC
Q 008848 507 TELSSAYIQGSLLQPQAFGAFSTAT--MTAGLVILDEC-GVPYVRTF 550 (551)
Q Consensus 507 TE~~~~~~~~~~~~~~~~~~iG~p~--~g~~v~IlD~~-g~~vp~Gv 550 (551)
||++.. ..+ .. ..|..+ +.+.+.|+|++ +++||+|.
T Consensus 239 TE~~~~-~~c-~~------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge 277 (445)
T TIGR03335 239 TEGTMC-GEC-QA------VAGLHVPEDLVHLDVYDPRHQRFLPDGE 277 (445)
T ss_pred hhhhhe-EEe-cC------CCCccccCCceEEEEEcCCCCCCCcCCC
Confidence 998532 111 11 123333 45789999976 56789985
No 126
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.70 E-value=5.5e-17 Score=177.80 Aligned_cols=281 Identities=16% Similarity=0.113 Sum_probs=189.7
Q ss_pred CCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCC----HHHHHHH---H
Q 008848 205 SAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA----AREIATR---L 276 (551)
Q Consensus 205 ~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~----~~~l~~~---l 276 (551)
+....+||++.+..+|.+++.|... ...|+.|+++|..+.++++..++++++|+.++|+||.+| ++++..+ +
T Consensus 65 ~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~ 144 (1032)
T KOG1178|consen 65 GIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFL 144 (1032)
T ss_pred ccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhh
Confidence 3445899999999999999999999 999999999999999999999999999999999999999 3322211 1
Q ss_pred HhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCCCCCCCCCCCCCCCC
Q 008848 277 RVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVD 356 (551)
Q Consensus 277 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (551)
......++. .++..........++.-+. ...-.+..+..... .......-+|
T Consensus 145 ~s~~~~i~~----------~l~i~~~~~~~~~~~~sv~------------~~~~~f~~~~~~~~------~r~~~~~~~d 196 (1032)
T KOG1178|consen 145 TSVELEIVR----------RLNIIDILLNSLFPKLSVE------------TIADSFQMVLHNED------TREIRVGGND 196 (1032)
T ss_pred eeccceehh----------hhhhHHHHhhccccccchh------------hccchhhhhhccCC------Ccceeeeccc
Confidence 111111110 0111111111000000000 00001111111111 1122334567
Q ss_pred CeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCC---C
Q 008848 357 AVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP---L 433 (551)
Q Consensus 357 ~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~---~ 433 (551)
+.+++.||||+||.||||.-+|..+.+...|+...+..+..+++-.....+++-.+.....+++..+..++++... .
T Consensus 197 s~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~ 276 (1032)
T KOG1178|consen 197 STALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDT 276 (1032)
T ss_pred ccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHHHhhHhhcCceeecccccCccc
Confidence 7899999999999999999999999999999999999988888755667767777766556665555555555322 3
Q ss_pred hhhHHHHHHHcCCcEEEecHHHHHHHHhcCcc----------CC---CCCCCccEEEeecCCCChhhHHHHHHhccCCce
Q 008848 434 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----------EG---LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (551)
Q Consensus 434 ~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~----------~~---~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (551)
+.++...+++++++..+.+|++.+.++..... .. ...+.|+....+||+....+...+...+...-.
T Consensus 277 ~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~ 356 (1032)
T KOG1178|consen 277 PGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFF 356 (1032)
T ss_pred hhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceee
Confidence 67899999999999999999998877654211 01 112378999999999998887755444432223
Q ss_pred ecccccccccccc
Q 008848 501 IESCGGTELSSAY 513 (551)
Q Consensus 501 ~n~YG~TE~~~~~ 513 (551)
..-|+.|+.++-.
T Consensus 357 ~~~y~s~~~~~~~ 369 (1032)
T KOG1178|consen 357 GLPYLSTDPTGLV 369 (1032)
T ss_pred eecccCCCCccce
Confidence 3448888876543
No 127
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.70 E-value=2.1e-15 Score=160.66 Aligned_cols=263 Identities=13% Similarity=0.099 Sum_probs=192.3
Q ss_pred cCCCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 008848 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vp 262 (551)
.++++||.+|+..-+. .+.+..++||++|..+|.++|.+|... +++||.|+++.++++|++++++||+.+|.+++|
T Consensus 779 R~a~tp~~~a~~~~n~--~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIp 856 (1363)
T KOG3628|consen 779 RAAKTPDHIAFTTLNA--RGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIP 856 (1363)
T ss_pred HhhcCCCceEEEEecc--CCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeec
Confidence 3589999999998654 345667999999999999999999987 999999999999999999999999999999999
Q ss_pred cCCCCCH------HHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhh
Q 008848 263 IADSFAA------REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL 336 (551)
Q Consensus 263 l~~~~~~------~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~ 336 (551)
+.|.... ..+..|++.++++.|+++.......+..+....+.+.+-+.+.+.+.... +|..-.
T Consensus 857 v~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~-----------t~~k~~ 925 (1363)
T KOG3628|consen 857 VPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE-----------TIRKRK 925 (1363)
T ss_pred cCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch-----------hhhhhh
Confidence 9887653 46678999999999999976432222112222222222222222221110 010000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhh-HHH
Q 008848 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VIL 415 (551)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (551)
..-. ......++....++.+||+-|.--++|.--||-.+|.++++..........+.+..-++.+.+++-..|+ ...
T Consensus 926 ~~~~--k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wc 1003 (1363)
T KOG3628|consen 926 KNIK--KLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWC 1003 (1363)
T ss_pred hhhh--ccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHH
Confidence 0000 0011122233456789999888889999999999999999999988888888887777777777766666 336
Q ss_pred HHHHHhCCEEEEecC---CCChhhHHHHHHHcCCcEEEecHHHHHHHHhc
Q 008848 416 FSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT 462 (551)
Q Consensus 416 ~~~l~~G~~lvl~~~---~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~ 462 (551)
+...++|...++++. ..++..|+..|.+++|.-++.+-..+..+.+.
T Consensus 1004 LlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~ 1053 (1363)
T KOG3628|consen 1004 LLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKG 1053 (1363)
T ss_pred HHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhc
Confidence 677889999888753 23678899999999999999888888877654
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.44 E-value=3e-12 Score=128.70 Aligned_cols=192 Identities=18% Similarity=0.107 Sum_probs=136.7
Q ss_pred CCCCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhh-HHHHHHHHhCCEEEE
Q 008848 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLAL 427 (551)
Q Consensus 352 ~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lvl 427 (551)
..+.++...|--||||||+|+-+..+...+..... ......+...+|++..+..++...+- ...+++--.|++++=
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 44556777799999999999999999987654333 33344678899998877766554443 444555555655543
Q ss_pred ecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCC--CCCCCccEEEeecCCCChhhHHHHHHhccCCceecccc
Q 008848 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (551)
Q Consensus 428 ~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~--~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (551)
.. .-+-..-+++|+++++|++.++|+.+..|++...... .+-.+||.+++|+|+++++..+.+..+++ +..++.||
T Consensus 166 ~~-~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g-~~~~diYG 243 (438)
T COG1541 166 IS-GGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG-CKAFDIYG 243 (438)
T ss_pred cC-CccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC-Cceeeccc
Confidence 32 2255678899999999999999999999887644332 23458999999999999999999998887 88899999
Q ss_pred ccccccccccCCcCCCCCcCccCCCCCCceEEEEC-CCCCccCCC
Q 008848 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYVRT 549 (551)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD-~~g~~vp~G 549 (551)
.||..+.-...+... . -.--.-++.-+.|+| +.|+++|.|
T Consensus 244 ltE~~g~g~~eC~~~--~--glhi~eD~~~~Ei~dP~t~e~l~dg 284 (438)
T COG1541 244 LTEGFGPGAGECTER--N--GLHIWEDHFIFEIVDPETGEQLPDG 284 (438)
T ss_pred cccccCCcccccccc--c--CCCcchhhceeeeecCCcCccCCCC
Confidence 999865421111111 1 011234567788899 568888887
No 129
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.15 E-value=7.5e-10 Score=114.14 Aligned_cols=145 Identities=15% Similarity=0.039 Sum_probs=98.6
Q ss_pred eEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCE-EEEecCCCC
Q 008848 358 VVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT-LALYQGSPL 433 (551)
Q Consensus 358 ~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~-lvl~~~~~~ 433 (551)
-..+.-||||||+|-.+.++........... ....++..++++..+. +..+ .++..+.+... +..++-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~--~ly~~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADN--NLYQSVNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccCh--hHHHHHHhccceeeecCCCcC
Confidence 3567789999999999999987643222211 1122455666655432 1111 22233323221 233332234
Q ss_pred hhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHhccCCceecccccccc
Q 008848 434 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTEL 509 (551)
Q Consensus 434 ~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~ 509 (551)
.+..++.|++++++++.+.|+.+..|++.......+ .+++.++++||.++++..+.+.+.++ +++++.||+||+
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg-~~V~~~YG~tEg 249 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFK-NTVHQIYQATEG 249 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhC-CCeeEccCCchh
Confidence 578899999999999999999999998753332323 47899999999999998888888886 899999999993
No 130
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=99.13 E-value=6.5e-13 Score=107.07 Aligned_cols=84 Identities=18% Similarity=0.156 Sum_probs=52.3
Q ss_pred cHHHHHHHHHHhHhcCCCCCchhhHHHHHHhhcccccCCCCC------CccccCCcchhccccHHHHHHHhCCcccccc-
Q 008848 41 DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP------PLYWFPSLDQSKLTNLGNALEIHGPKLLGRA- 113 (551)
Q Consensus 41 ~hq~~pf~~~l~~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 113 (551)
+||+|||++ |+++|++.|+.+++|| ||+||++++..... .....+.....+++||.+.+.+.++++.+.+
T Consensus 1 ~hq~~Pf~~-lv~~l~~~r~~~~~pl--fqv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~l~~~~~~~~l~~~~~ 77 (91)
T PF13745_consen 1 EHQDYPFER-LVEALGPPRDPSRNPL--FQVMFNYQNFSQSALDLGGLRLEPIPLENGGAKFDLTLEVREDGDGLRLQLE 77 (91)
T ss_dssp -T--S-HHH-HHHHT-----TTS-SS---SEEEEEE----S----SSEEEEE-SS--SB-SSSEEEEEEE-SS-EEEEEE
T ss_pred CCccCCHHH-HHHHhCcccCCccccc--cCeEEEEEecccccccCCCceEEEeeccccceeeeEEEEEEecCCeEEEEEE
Confidence 699999999 9999999999999999 99999999875432 1122344467899999999999999999999
Q ss_pred CCCCccchHHHHHHhhhCh
Q 008848 114 YKDPITSFRLFQKFTVEHP 132 (551)
Q Consensus 114 y~~~~~~~~~~~~~~i~~~ 132 (551)
|++ ++|++.+|++|
T Consensus 78 Y~~-----~lf~~~ti~~~ 91 (91)
T PF13745_consen 78 YNT-----DLFSEETIERM 91 (91)
T ss_dssp EET-----TT--HHHHHHH
T ss_pred EEh-----HhCCHHHHhcC
Confidence 999 99999999864
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=98.56 E-value=6.1e-07 Score=97.35 Aligned_cols=272 Identities=11% Similarity=0.062 Sum_probs=180.5
Q ss_pred CCCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHH-HHHhh-cCCCCEEEEEcCCC--HHHHHHHHHHHHhCCeEEe
Q 008848 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVAN-ALDTM-FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~-~L~~~-v~~gd~V~i~~~~~--~e~vva~lA~~~~Ga~~vp 262 (551)
..++..+|.++-+. .|....+||..+..++.++|+ .|.+- +.++|+|.++...+ .++++..++|.-.|.+.+|
T Consensus 105 nhs~~~ta~i~id~---kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp 181 (1363)
T KOG3628|consen 105 NHSATSTAHICIDK---KGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVP 181 (1363)
T ss_pred cCCCCCceEEEEcC---CCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeecc
Confidence 56778888888775 234678999999999999999 55555 99999999998765 8999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeccCccccchhHHhhcCCCceEEecCCCCCCCCCCCCCCcchHHhhccCCCC
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (551)
+.+.+..+++..+++....+++++.....+.+.....-... +....|....+.....
T Consensus 182 ~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~-----------------------~k~v~~w~t~~~k~~~ 238 (1363)
T KOG3628|consen 182 LSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSL-----------------------AKAVAWWKTNDFKGNY 238 (1363)
T ss_pred chhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccH-----------------------HHHHHhhhccccccee
Confidence 99999999999999999999999887543211110000000 0000010000000000
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHHHH---------------h-----hhhcCCCCCCEEEE
Q 008848 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---------------G-----WAHIDLKVGDVYCW 402 (551)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---------------~-----~~~~~~~~~d~~l~ 402 (551)
..+....+ ..... ..||-||++++|+--||+.+|+ ++..... . ...+++...++++.
T Consensus 239 ~~~k~~~P-~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~ 315 (1363)
T KOG3628|consen 239 TKDKIKKP-RMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLT 315 (1363)
T ss_pred ehhhccCC-ceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceee
Confidence 00000011 11112 7999999999999999999998 4432221 1 11234445555555
Q ss_pred ecCcccchhh-HHHHHHHHhCCEEEEecCCC--ChhhHHHHHHHcCCcEEEecHHHHHHHHhc----C-------ccCCC
Q 008848 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNT----N-------CLEGL 468 (551)
Q Consensus 403 ~~~~~~~~~~-~~~~~~l~~G~~lvl~~~~~--~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~----~-------~~~~~ 468 (551)
.....-..|+ +.++.+|.+|.|.+.+|... .+-.+..++.++|.+++..--..++..... + .....
T Consensus 316 ~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~ 395 (1363)
T KOG3628|consen 316 NLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTP 395 (1363)
T ss_pred ccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCC
Confidence 4444433443 34788999999999998643 456788999999999887765444433221 0 01124
Q ss_pred CCCCccEEEeecCCCChhh
Q 008848 469 DWTKIRSFASTGETSNVDD 487 (551)
Q Consensus 469 ~l~sLr~i~~gGe~l~~~~ 487 (551)
++++||.+++.-+.+..+.
T Consensus 396 d~sslk~C~Vtc~~vd~~~ 414 (1363)
T KOG3628|consen 396 DLSSLKGCMVTCTAVDTEF 414 (1363)
T ss_pred CccceeeeEEeeeecchHH
Confidence 6889999999999888773
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.15 E-value=3.4e-05 Score=78.08 Aligned_cols=188 Identities=14% Similarity=-0.023 Sum_probs=98.1
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh---hhcCCCCCC--EEEEecCcccc---hh--hHHHHHHHHhC
Q 008848 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGD--VYCWPTNLGWV---MG--PVILFSSFLNG 422 (551)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d--~~l~~~~~~~~---~~--~~~~~~~l~~G 422 (551)
.+++++..++-||||||.|--+.+.+..+........ ..+...... .++...|-... ++ .......+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 3456678889999999998656665555444332222 222221111 22332232221 11 11222233444
Q ss_pred CEEEEec-CCCChhhHHHHH----HHcCCcEEEecHHHHHHHHhcCcc--CCCCCC-CccEEEeec------CCCCh-hh
Q 008848 423 ATLALYQ-GSPLERSFGKFV----QDAGVTVLGTVPSLVKAWRNTNCL--EGLDWT-KIRSFASTG------ETSNV-DD 487 (551)
Q Consensus 423 ~~lvl~~-~~~~~~~~~~~i----~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~-sLr~i~~gG------e~l~~-~~ 487 (551)
.. ..+. ...+.+.+.+.+ .+.+...+++.|.++-.++..... ....|+ ..+.+-.|| |.++. +.
T Consensus 166 ~~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef 244 (365)
T PF04443_consen 166 SR-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEF 244 (365)
T ss_pred ce-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHH
Confidence 55 3443 234555554443 456677888888876655442211 123343 344444444 34654 45
Q ss_pred HHHHHHhccC---CceeccccccccccccccCCcCCCCCcCccCCCCCCceEEEECC-CCCccCCCC
Q 008848 488 DLWLSSKAWY---NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYVRTF 550 (551)
Q Consensus 488 ~~~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~g~~v~IlD~-~g~~vp~Gv 550 (551)
.+.+.+.++. ..+++.||+||.......+... . .++|-. |.|.|+ +.+|+|.|-
T Consensus 245 ~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~--~------~~~p~w-V~iRDp~tl~~~~~Ge 302 (365)
T PF04443_consen 245 YARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG--H------FHVPPW-VIIRDPETLEPLPPGE 302 (365)
T ss_pred HHHHHHHHCCCCHHHeeeeeeccccchhheeCCCC--c------ccCCCe-EEEECCCCCcCCCCCC
Confidence 5666666763 3699999999976543222110 0 133333 777785 578999884
No 133
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=93.79 E-value=0.25 Score=50.72 Aligned_cols=82 Identities=16% Similarity=0.069 Sum_probs=69.4
Q ss_pred eEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCC--HHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEE
Q 008848 208 NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGI 284 (551)
Q Consensus 208 ~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~--~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~v 284 (551)
.-+|..++...+..+|+.|... +.+||+|.++..-+ ..-+-..+|+.++|+.++|+.+ -.-++-..++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~-g~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG-GNTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC-ccHHHHHHHHHhcCCcEE
Confidence 3689999999999999999999 99999999887721 1116788999999999999988 345667788999999999
Q ss_pred Eeecce
Q 008848 285 FTQDFI 290 (551)
Q Consensus 285 l~~~~~ 290 (551)
.+.+++
T Consensus 187 ~~tps~ 192 (438)
T COG1541 187 AATPSY 192 (438)
T ss_pred EEChHH
Confidence 999875
No 134
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=80.21 E-value=18 Score=38.07 Aligned_cols=95 Identities=14% Similarity=0.199 Sum_probs=68.0
Q ss_pred CceEEEEecCCCCCCC--ceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH--HHHHHHHHHHhCCeEEecCC
Q 008848 191 NTVAIVWREDRCDESA--VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR--AVIIYLAIILAGYVVVSIAD 265 (551)
Q Consensus 191 d~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e--~vva~lA~~~~Ga~~vpl~~ 265 (551)
+.++.++...|. +|. ...+|.+++...+...++.+... +++||++.++.+.+.. ....++++.+.|+..+|...
T Consensus 86 ~~i~~i~~TSGT-TG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~ 164 (445)
T TIGR03335 86 KDIYTIHETSGT-SGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK 164 (445)
T ss_pred HHeEEEEeCCCC-CCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc
Confidence 455555543332 233 23579999998888889888888 9999999999876643 23445788999998887653
Q ss_pred CCCHHHHHHHHHhcCceEEEeecc
Q 008848 266 SFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
.+....++++.++..++....
T Consensus 165 ---~~~~~~~i~~~~~t~l~~~ps 185 (445)
T TIGR03335 165 ---CTFPIRIIESYRPTGIVASVF 185 (445)
T ss_pred ---hhHHHHHHHHhCCCEEEECHH
Confidence 234567889999998877554
No 135
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=73.61 E-value=18 Score=34.15 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=55.7
Q ss_pred CCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCCeEEecCC
Q 008848 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIAD 265 (551)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~--e~vva~lA~~~~Ga~~vpl~~ 265 (551)
.++.+|++.... -.|.+.+...+ ... +.++|++. .+|-.. .+...+++++..|+..+.+ +
T Consensus 148 ~~~D~a~l~yTs--------g~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~ 210 (227)
T TIGR03089 148 DATAPALVAGGG--------EWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-T 210 (227)
T ss_pred CCCcceeeeccc--------cccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-c
Confidence 456777776554 23444443322 455 89999999 998765 4556789999999998887 7
Q ss_pred CCCHHHHHHHHHhcCc
Q 008848 266 SFAAREIATRLRVSKA 281 (551)
Q Consensus 266 ~~~~~~l~~~l~~~~~ 281 (551)
.+.++++-..+++.++
T Consensus 211 rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 211 HPDPARLDQIAETERV 226 (227)
T ss_pred CCCHHHHHHHHHhhcC
Confidence 8999999888888765
No 136
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=73.29 E-value=19 Score=37.49 Aligned_cols=98 Identities=13% Similarity=0.053 Sum_probs=69.1
Q ss_pred CceEEEEecCCCCCCCce--EecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCCeEEecCC
Q 008848 191 NTVAIVWREDRCDESAVN--LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIAD 265 (551)
Q Consensus 191 d~~Al~~~~~~~~~~~~~--~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~--e~vva~lA~~~~Ga~~vpl~~ 265 (551)
+.++.+....| .+|..+ .+|..++......+++.+... +++||++....+.+. ..+..+++..+.|+..+++.+
T Consensus 75 ~~~~~~~~TSG-TTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 153 (422)
T TIGR02155 75 EQVVRIHASSG-TTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISG 153 (422)
T ss_pred HHcEEEEECCC-CCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCC
Confidence 44555533322 233333 467788877777777888878 999999988765442 223346778899999999877
Q ss_pred CCCHHHHHHHHHhcCceEEEeecce
Q 008848 266 SFAAREIATRLRVSKAKGIFTQDFI 290 (551)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~vl~~~~~ 290 (551)
.. .+++...|++.++.++++.+..
T Consensus 154 ~~-~~~~~~~i~~~~~t~l~~~Ps~ 177 (422)
T TIGR02155 154 GQ-TEKQVQLIQDFKPDIIMVTPSY 177 (422)
T ss_pred CC-HHHHHHHHHHHCCCEEEEcHHH
Confidence 65 4778889999999999988764
No 137
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=72.33 E-value=25 Score=36.17 Aligned_cols=89 Identities=16% Similarity=0.085 Sum_probs=64.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.||.+|++. =.+..+|++.+...+. ......++++++++....+-+... +..+++++..|+..+.++.
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~-~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEF-VVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHH-HHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcccee-eeeeccccccccccccccc
Confidence 467788876 2345577777655443 333457889999887776665432 3446788889999999987
Q ss_pred CCChhhHHHHHHHcCCcEEEe
Q 008848 431 SPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~ 451 (551)
....+.+...+++.+++++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 777888999999999999996
No 138
>PLN02736 long-chain acyl-CoA synthetase
Probab=64.52 E-value=56 Score=36.26 Aligned_cols=102 Identities=10% Similarity=-0.070 Sum_probs=71.6
Q ss_pred EEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
..+|.+.+...+.. .....++.++|++...++-+.... ...++++..|+..+.++....++++...+++.++.+++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL-IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 34688776554433 334578999999987766655433 33578888999998877666788999999999999999
Q ss_pred ecHHHHHHHHhcCccCCCCCCCccEEEeec
Q 008848 451 TVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (551)
Q Consensus 451 ~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gG 480 (551)
..+..+..+.... ..++.++.++.-+
T Consensus 156 ~~~~~~~~~~~~~----~~~~~l~~ii~~~ 181 (651)
T PLN02736 156 CVPQTLNTLLSCL----SEIPSVRLIVVVG 181 (651)
T ss_pred ECHHHHHHHHHHh----hcCCCceEEEEEC
Confidence 9988776665421 1245666666543
No 139
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=63.79 E-value=75 Score=33.69 Aligned_cols=85 Identities=8% Similarity=-0.069 Sum_probs=62.1
Q ss_pred EecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+. ......++++++++....+-+...- ..+++.+..|+..+.++.......+...+++.++..+..
T Consensus 30 ~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 108 (513)
T PRK07656 30 RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWV-IAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFV 108 (513)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH-HHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEE
Confidence 478877755443 3334467889999988776664433 346678899998888876667788999999999999998
Q ss_pred cHHHHHHHH
Q 008848 452 VPSLVKAWR 460 (551)
Q Consensus 452 ~Ps~l~~l~ 460 (551)
.+.....+.
T Consensus 109 ~~~~~~~~~ 117 (513)
T PRK07656 109 LGLFLGVDY 117 (513)
T ss_pred chhhHHHHH
Confidence 887665543
No 140
>PRK09274 peptide synthase; Provisional
Probab=62.48 E-value=50 Score=35.63 Aligned_cols=98 Identities=11% Similarity=0.030 Sum_probs=64.5
Q ss_pred CCCeEEEEecCCCC-CCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 355 VDAVVNILFSSGTT-GEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 355 ~~~~a~iiyTSGTT-G~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
|+.+|.+....+++ +..+-..+|.+.+...+.. .....+++++|++....+-+...- ..+++++..|+..+.++.
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~-~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFF-ALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHH-HHHHHHHHcCeEEEEcCC
Confidence 45666554322221 1223335788777554433 334568899999988776655433 336788899999888776
Q ss_pred CCChhhHHHHHHHcCCcEEEecH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVP 453 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P 453 (551)
....+.+...+++.++..+...+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 66677888899999998888754
No 141
>PLN03052 acetate--CoA ligase; Provisional
Probab=60.17 E-value=82 Score=35.58 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=69.4
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++.-..|..|.+ ...+|.+.+...+. ......+++++|++..+++-+..+- ..+++++..|+..+.++.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~v-ia~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAV-IIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHcCCEEEeeCC
Confidence 356777654332221222 24578877755443 3334578999999998888766544 336788899999998877
Q ss_pred CCChhhHHHHHHHcCCcEEEecHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
.+.++.+...+++.++.++++...
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 777889999999999999888654
No 142
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=59.51 E-value=88 Score=34.73 Aligned_cols=95 Identities=13% Similarity=-0.051 Sum_probs=68.0
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCC
Q 008848 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (551)
Q Consensus 355 ~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~ 431 (551)
++.+|++.- +...+ ....+|.+.+...+. ......++++||++...++-+-..- ..+++++..|+..+.+...
T Consensus 75 ~~~~A~~~~-~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~-~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIYE-CPYLK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL-IAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEEE-cCCCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCCC
Confidence 466666542 21111 235688887754443 3344578999999998888776544 3367888999998888777
Q ss_pred CChhhHHHHHHHcCCcEEEecH
Q 008848 432 PLERSFGKFVQDAGVTVLGTVP 453 (551)
Q Consensus 432 ~~~~~~~~~i~~~~vt~l~~~P 453 (551)
..++.+...|++.++.++++..
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 7888999999999999998764
No 143
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=58.86 E-value=77 Score=35.01 Aligned_cols=97 Identities=16% Similarity=0.044 Sum_probs=68.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++... .. ......+|++.+...+... ....++.++|++...++-+...- ..+++++..|+..+.++.
T Consensus 80 ~p~~~Al~~~~-~~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEG-DD--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAA-VAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEEC-CC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEecCC
Confidence 36777776421 11 1135678988876554433 34468899999988877765543 336788999999998876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
......+...+++.++.++.+...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 677788999999999999887543
No 144
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=58.78 E-value=80 Score=34.76 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=68.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++... ..+| ....+|.+.+...+. ......+++++|++...++-+...- ..+++++..|+..+.++.
T Consensus 70 ~p~~~Al~~~~-~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEG-DEPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAA-IAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEeccCC
Confidence 45777776432 2123 245688887755443 3334578999999998887765433 346788899999888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
...+..+...+++.++.++.+...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 677888999999999999887654
No 145
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=58.73 E-value=86 Score=34.54 Aligned_cols=96 Identities=14% Similarity=0.032 Sum_probs=66.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++ +.+..+|. .-.+|.+.+...+. ......+++++|++..+++-+...- ..+++++..|+..+.+..
T Consensus 66 ~p~~~A~~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALI-AVSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAA-FAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCC
Confidence 45677765 43322332 34578877754443 3334568999999998877665433 336788899999888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVP 453 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P 453 (551)
......+...|++.++.++.+..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 67778899999999999888754
No 146
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=57.93 E-value=77 Score=34.17 Aligned_cols=83 Identities=12% Similarity=-0.020 Sum_probs=62.5
Q ss_pred ecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHH
Q 008848 376 WTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSL 455 (551)
Q Consensus 376 ~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~ 455 (551)
+|.+.+...+......+.-.++|++...++-+...- ..+++++..|+..+.++.....+++...++..++..+......
T Consensus 46 ~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~ 124 (539)
T PRK06334 46 LSYNQVRKAVIALATKVSKYPDQHIGIMMPASAGAY-IAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQL 124 (539)
T ss_pred ccHHHHHHHHHHHHHHHhhccCCeEEEEcCCchHHH-HHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHH
Confidence 788888776666555554458999988877766533 3367889999998888765567889999999999998887766
Q ss_pred HHHH
Q 008848 456 VKAW 459 (551)
Q Consensus 456 l~~l 459 (551)
+..+
T Consensus 125 ~~~~ 128 (539)
T PRK06334 125 MQHL 128 (539)
T ss_pred HHHH
Confidence 5544
No 147
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=57.91 E-value=67 Score=34.62 Aligned_cols=97 Identities=19% Similarity=0.133 Sum_probs=67.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++..- ++.++...+|.+.+...+.. .....++++++++...++-+.... ..+++.+..|+..+.++.
T Consensus 37 ~p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~-~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 37 CPDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFT-VLYLACSRIGAVLNPLMP 112 (547)
T ss_pred CCCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHH-HHHHHHHhcCcEEecccc
Confidence 35677776432 23344457888877654433 334468899999988877766543 446788899999887765
Q ss_pred CCChhhHHHHHHHcCCcEEEecHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
....+.+...+++.++..+.+...
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEecc
Confidence 556778899999999998876553
No 148
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=57.64 E-value=81 Score=35.35 Aligned_cols=103 Identities=10% Similarity=-0.013 Sum_probs=72.4
Q ss_pred EEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
..+|.+.+...+.. .....+++++|++..+++-+...- ...++++..|+..|-+.....++.+...+++.++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWL-IALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 34677766554433 334568999999887776554422 33667889999999887667788999999999999999
Q ss_pred ecHHHHHHHHhcCccCCCCCCCccEEEeecC
Q 008848 451 TVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (551)
Q Consensus 451 ~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe 481 (551)
.....+..+.+.. ..+++++.+++-++
T Consensus 184 ~~~~~~~~l~~~~----~~~~~l~~ii~~~~ 210 (696)
T PLN02387 184 CDSKQLKKLIDIS----SQLETVKRVIYMDD 210 (696)
T ss_pred ECHHHHHHHHHHh----hccCCceEEEEECC
Confidence 9888877765432 12456766665543
No 149
>PLN02654 acetate-CoA ligase
Probab=57.43 E-value=95 Score=34.58 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=68.0
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCC
Q 008848 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (551)
Q Consensus 355 ~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~ 431 (551)
++.+|++ |.....| ....+|.+.+...+. ......++++||++...++-....- ..+++++..|+..+.+...
T Consensus 103 ~~~~Al~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v-~a~lA~~~~Gav~vpv~~~ 178 (666)
T PLN02654 103 GDKIAIY-WEGNEPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELP-IAMLACARIGAVHSVVFAG 178 (666)
T ss_pred CCCEEEE-EEcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEecCCC
Confidence 5667765 3221111 235688888765443 3344578999999988887765433 3467889999999988777
Q ss_pred CChhhHHHHHHHcCCcEEEecHH
Q 008848 432 PLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 432 ~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
..++.+...+++.++.++.+...
T Consensus 179 ~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 179 FSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCHHHHHHHHHhcCceEEEEcCc
Confidence 78889999999999999887654
No 150
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=57.40 E-value=77 Score=33.73 Aligned_cols=100 Identities=14% Similarity=0.042 Sum_probs=67.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|++.... .|.. -.+|.+.+...+... ....++.++|++....+-+...- ..+++++..|+..+.++.
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCc
Confidence 456777654321 1222 236777665444333 23568899999988776665433 336678889998888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l~~ 458 (551)
...++.+...+++.++..+...+.....
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPM 122 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHH
Confidence 6677889999999999999888765543
No 151
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=57.30 E-value=86 Score=33.21 Aligned_cols=84 Identities=14% Similarity=-0.044 Sum_probs=61.9
Q ss_pred ecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEec
Q 008848 376 WTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (551)
Q Consensus 376 ~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~ 452 (551)
+|.+.+...+. ......++++++++....+-+... +..+++++..|+..+.++.......+...+++.++..+...
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~ 110 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEY-LEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVD 110 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEc
Confidence 78877755443 333346788999998887776643 34467889999998888766667888999999999998888
Q ss_pred HHHHHHHH
Q 008848 453 PSLVKAWR 460 (551)
Q Consensus 453 Ps~l~~l~ 460 (551)
......+.
T Consensus 111 ~~~~~~~~ 118 (521)
T PRK06187 111 SEFVPLLA 118 (521)
T ss_pred chHHHHHH
Confidence 77655543
No 152
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=57.13 E-value=5 Score=43.21 Aligned_cols=32 Identities=28% Similarity=0.315 Sum_probs=25.0
Q ss_pred CCCCCCeEEEEecCCCCCC-CceEEecchhhHH
Q 008848 352 YNPVDAVVNILFSSGTTGE-PKAIPWTQLSSIR 383 (551)
Q Consensus 352 ~~~~~~~a~iiyTSGTTG~-PKgV~~sh~~l~~ 383 (551)
-..++.+.+...||||||. ||-+.+|...+..
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 3445678999999999999 9999999876543
No 153
>PLN02246 4-coumarate--CoA ligase
Probab=56.80 E-value=73 Score=34.19 Aligned_cols=97 Identities=13% Similarity=0.026 Sum_probs=66.4
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++- +. ++-.+|++.+....... ....++.++|++....+-+...- ..+++++..|+..+.++.
T Consensus 36 ~~~~~a~~~---~~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLID---GA----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFV-LAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEe---cC----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHH-HHHHHHHHcCEEEecCCC
Confidence 456777652 21 23358888775544333 23468899999988776664332 336778888998888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l~~ 458 (551)
......+..++++.++..+.........
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 135 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDK 135 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHH
Confidence 6677889999999999988876655443
No 154
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=56.24 E-value=1e+02 Score=34.19 Aligned_cols=95 Identities=14% Similarity=-0.076 Sum_probs=67.3
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCC
Q 008848 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (551)
Q Consensus 355 ~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~ 431 (551)
++.+|++.... .| ....+|.+.+...+.. .....+++++|++...++-+...- ..+++++..|+..+.++..
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v-~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETV-VAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCcEEEeeCCC
Confidence 56677654322 22 2356888877654433 334568999999998887765543 3367889999999888766
Q ss_pred CChhhHHHHHHHcCCcEEEecHH
Q 008848 432 PLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 432 ~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
.....+...+++.++.++.+...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 77788999999999998887653
No 155
>PRK06839 acyl-CoA synthetase; Validated
Probab=56.11 E-value=99 Score=32.60 Aligned_cols=96 Identities=16% Similarity=0.029 Sum_probs=67.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh----hcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEec
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~ 429 (551)
.|+.+|.+. + +..+|++.+......... ..++.+++++....+-+... +..+++++..|+..+.++
T Consensus 15 ~p~~~a~~~---~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---E------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY-IVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---C------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecC
Confidence 356666662 1 456788877655444332 35788999988777666442 234678888899888877
Q ss_pred CCCChhhHHHHHHHcCCcEEEecHHHHHHH
Q 008848 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (551)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l 459 (551)
....+..+...+++.+++.+...+.....+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 656778888999999999998887765543
No 156
>PRK07798 acyl-CoA synthetase; Validated
Probab=55.78 E-value=1e+02 Score=32.83 Aligned_cols=86 Identities=10% Similarity=-0.077 Sum_probs=60.9
Q ss_pred EEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
-.+|.+.+...+. ......+++++|++....+-+.+.- ..+|+.+..|+..+.++.......+...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~-~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYV-EAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 3578777654433 3334568889999887765554322 33677888998888877666678899999999999998
Q ss_pred ecHHHHHHHH
Q 008848 451 TVPSLVKAWR 460 (551)
Q Consensus 451 ~~Ps~l~~l~ 460 (551)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8876655544
No 157
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=54.94 E-value=74 Score=33.34 Aligned_cols=108 Identities=13% Similarity=0.053 Sum_probs=71.7
Q ss_pred eEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 008848 373 AIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (551)
Q Consensus 373 gV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l 449 (551)
|+..|.+.++.-+. .....+++.+||++..+.|=+.- +....+++-.+|..++.+.+..-..++.-.+++.++..+
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~-w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l 153 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYE-WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKAL 153 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHH-HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEE
Confidence 45567777665443 33456899999999877655432 333356677788887776544445667778999999999
Q ss_pred EecHHHHH-----HHHhc---------CccCCCCCCCccEEEeecC
Q 008848 450 GTVPSLVK-----AWRNT---------NCLEGLDWTKIRSFASTGE 481 (551)
Q Consensus 450 ~~~Ps~l~-----~l~~~---------~~~~~~~l~sLr~i~~gGe 481 (551)
+..|.+-. .|.+. .......++.|+.++..+|
T Consensus 154 ~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 154 FAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred EccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 98887543 33332 1123345788999998884
No 158
>PRK05857 acyl-CoA synthetase; Validated
Probab=54.16 E-value=76 Score=34.18 Aligned_cols=94 Identities=11% Similarity=-0.006 Sum_probs=66.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|.+.. .| ...+|.+.+...+... ....++.+++++...++-+...- ..+++++..|+..+.++.
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~-~~~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETY-LSVLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEecCc
Confidence 4666666532 22 1357888775544333 33467899999988887776544 336788999999998876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSL 455 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~ 455 (551)
....+.+..+++..++..+...+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 6677888899999998888876643
No 159
>PRK07788 acyl-CoA synthetase; Validated
Probab=54.03 E-value=72 Score=34.35 Aligned_cols=85 Identities=13% Similarity=0.044 Sum_probs=62.7
Q ss_pred EecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+.. .....++.++|++....+-+.. .+..+++++..|+..+.++.....+.+...+++.++..+..
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRG-FVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 4788777554433 3344678899998877655433 22446788999999999887677788999999999999998
Q ss_pred cHHHHHHHH
Q 008848 452 VPSLVKAWR 460 (551)
Q Consensus 452 ~Ps~l~~l~ 460 (551)
.+.....+.
T Consensus 153 ~~~~~~~~~ 161 (549)
T PRK07788 153 DDEFTDLLS 161 (549)
T ss_pred CchhHHHHH
Confidence 877666553
No 160
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=53.19 E-value=75 Score=34.48 Aligned_cols=85 Identities=16% Similarity=0.101 Sum_probs=63.6
Q ss_pred EEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
..+|.+.+...+.. .....+++++|++....+-+.... ..+++.+..|+..+.++....+.++...+++.+++.+.
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 150 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELY-FALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLI 150 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEE
Confidence 46788877655433 334568899999988777665533 34678889999888777666778899999999999999
Q ss_pred ecHHHHHHH
Q 008848 451 TVPSLVKAW 459 (551)
Q Consensus 451 ~~Ps~l~~l 459 (551)
..+..+..+
T Consensus 151 ~~~~~~~~~ 159 (570)
T PRK04319 151 TTPALLERK 159 (570)
T ss_pred EChhhhhcc
Confidence 988876544
No 161
>PRK08315 AMP-binding domain protein; Validated
Probab=53.08 E-value=1.8e+02 Score=31.35 Aligned_cols=97 Identities=11% Similarity=0.199 Sum_probs=67.5
Q ss_pred CCCceEEEEecCCCCCCCc--eEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCeEEec
Q 008848 189 EDNTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~--~~e~vva~lA~~~~Ga~~vpl 263 (551)
.++.+|.+....| .+|.. ..+|++.+...+..+.. .. ++++|++...++- +..++..+++.+..|+..+..
T Consensus 197 ~~~~~a~i~~TSG-tTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 272 (559)
T PRK08315 197 DPDDPINIQYTSG-TTGFPKGATLTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYP 272 (559)
T ss_pred CCCCcEEEEEcCC-CCCCcceEEeeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEe
Confidence 3566666655443 23333 36788877654443332 23 8899999888775 445566788999999988855
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecc
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
.....+.++...+++.++.++...+.
T Consensus 273 ~~~~~~~~~~~~l~~~~~t~~~~~P~ 298 (559)
T PRK08315 273 GEGFDPLATLAAVEEERCTALYGVPT 298 (559)
T ss_pred cCCCCHHHHHHHHHHcCCeEEecchH
Confidence 66677888999999999999887654
No 162
>PRK13388 acyl-CoA synthetase; Provisional
Probab=53.08 E-value=1.2e+02 Score=32.54 Aligned_cols=84 Identities=13% Similarity=-0.064 Sum_probs=61.5
Q ss_pred EecchhhHHHHHHhh---hhcCC-CCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 375 PWTQLSSIRCTAEGW---AHIDL-KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
.+|++.+........ ...++ .+++++...++-+...- ..+++++..|+..+.++......++...+++.++.++.
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v-~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEML-FWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHH-HHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 678887765444333 34577 68899888877766533 34678889999999887666678899999999999988
Q ss_pred ecHHHHHHH
Q 008848 451 TVPSLVKAW 459 (551)
Q Consensus 451 ~~Ps~l~~l 459 (551)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876655433
No 163
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=52.56 E-value=74 Score=34.34 Aligned_cols=89 Identities=11% Similarity=-0.019 Sum_probs=68.5
Q ss_pred eEEecchhhHHHHHHhhhh---cC--CCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCc
Q 008848 373 AIPWTQLSSIRCTAEGWAH---ID--LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVT 447 (551)
Q Consensus 373 gV~~sh~~l~~~~~~~~~~---~~--~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt 447 (551)
|..+|++.+...+...... .+ ++.+|++...+|-+..+... .++++..|+.+.-.....+..++...++.-+..
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~-~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVEL-ALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHH-HHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 8899998876655444332 23 78899999988877655433 567889999888777677889999999999999
Q ss_pred EEEecHHHHHHHHhc
Q 008848 448 VLGTVPSLVKAWRNT 462 (551)
Q Consensus 448 ~l~~~Ps~l~~l~~~ 462 (551)
+++.....+..+.+.
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999988877776543
No 164
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=52.22 E-value=1.6e+02 Score=33.41 Aligned_cols=118 Identities=10% Similarity=-0.009 Sum_probs=78.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh---hh---cCCCCC-----------CEEEEecCcccchhhHHHH
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AH---IDLKVG-----------DVYCWPTNLGWVMGPVILF 416 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~---~~~~~~-----------d~~l~~~~~~~~~~~~~~~ 416 (551)
.++.+|++-... |.+ ...+|.+.+...+.... .. .++.++ |++..+++-+.. ++...+
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e-w~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN-WLVADL 148 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH-HHHHHH
Confidence 356777753322 221 23577777655443322 22 378887 787776655433 223467
Q ss_pred HHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeec
Q 008848 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (551)
Q Consensus 417 ~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gG 480 (551)
+++..|+..|-+.....++++...+++-++.+++..+..+..+.... ..++.++.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 88999999998876778889999999999999999888877776432 1256777666544
No 165
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=51.73 E-value=9.2 Score=30.68 Aligned_cols=26 Identities=12% Similarity=0.077 Sum_probs=21.9
Q ss_pred ccCCCCCCceEEEEC-CCCCccCCCCC
Q 008848 526 AFSTATMTAGLVILD-ECGVPYVRTFS 551 (551)
Q Consensus 526 ~iG~p~~g~~v~IlD-~~g~~vp~Gv~ 551 (551)
+-|+|++|++|++.| .+|+++-.|.|
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~~l~~g~T 49 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQVLASGKT 49 (97)
T ss_pred CCCCccCCCEEEEEECCCCcEeeeeee
Confidence 457999999999999 89998876654
No 166
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=51.67 E-value=1.3e+02 Score=33.43 Aligned_cols=93 Identities=16% Similarity=-0.027 Sum_probs=66.1
Q ss_pred CCeEEEEecCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCC
Q 008848 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (551)
Q Consensus 356 ~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~ 432 (551)
+++|++... .+|. ...+|.+.+...+.. .....+++++|++...++-+..... .+++++..|+..+.+....
T Consensus 99 ~~~a~~~~~--~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~-~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVD--ETHE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVV-AMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEEC--CCCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHhCeEEEecCCCC
Confidence 556665432 2332 345788877654443 3345689999999988877755443 3678899999988887667
Q ss_pred ChhhHHHHHHHcCCcEEEecH
Q 008848 433 LERSFGKFVQDAGVTVLGTVP 453 (551)
Q Consensus 433 ~~~~~~~~i~~~~vt~l~~~P 453 (551)
..+.+...+++.++.++.+..
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEcc
Confidence 778899999999999888754
No 167
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=51.11 E-value=98 Score=33.41 Aligned_cols=95 Identities=17% Similarity=0.067 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh----hcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEec
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~ 429 (551)
.++.+|++. .| -.+|++.+......... ..++++++++..+.+-+...- ..+++++..|+..+.++
T Consensus 38 ~~~~~a~~~--~~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHS--FG-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYP-IATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEE--CC-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHhCeEEeccC
Confidence 356677653 12 24788777555443332 468899999988776665433 34678889999999887
Q ss_pred CCCChhhHHHHHHHcCCcEEEecHHHHHH
Q 008848 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (551)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~ 458 (551)
......++...+.+.+++.+.........
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 66677888999999999998887655443
No 168
>PRK13383 acyl-CoA synthetase; Provisional
Probab=50.58 E-value=78 Score=33.75 Aligned_cols=84 Identities=10% Similarity=-0.013 Sum_probs=61.3
Q ss_pred EecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+... ....++.+++++...++-+.+.- ..+++.+..|+..+.++.....+.+...+++.++..+..
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~-~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFV-TAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 46776665444333 33457899999887776554432 346788899999998887677889999999999999998
Q ss_pred cHHHHHHH
Q 008848 452 VPSLVKAW 459 (551)
Q Consensus 452 ~Ps~l~~l 459 (551)
.+.....+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 87765544
No 169
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=49.94 E-value=93 Score=34.30 Aligned_cols=96 Identities=15% Similarity=0.043 Sum_probs=67.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHH---HHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++ +-+..+|. .-.+|.+.+...+ .......++.++|++...++-+...- ..+++++..|+..+.+..
T Consensus 65 ~p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v-~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAV-FAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHhCCEEEecCC
Confidence 35667765 43323332 3457888775544 33344578999999988887765433 346788999999888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVP 453 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P 453 (551)
......+...|++.++.++.+..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 77778899999999999888754
No 170
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=49.83 E-value=1.1e+02 Score=33.08 Aligned_cols=85 Identities=16% Similarity=0.169 Sum_probs=64.5
Q ss_pred EecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+.... ...++.+++++....+-+.+. +..+++.+..|+..+.++......++...+++.+++.+..
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 477777655544333 346789999998877776654 3447788999999998886677789999999999999998
Q ss_pred cHHHHHHHH
Q 008848 452 VPSLVKAWR 460 (551)
Q Consensus 452 ~Ps~l~~l~ 460 (551)
.+.....+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 887766553
No 171
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=49.44 E-value=1.3e+02 Score=32.73 Aligned_cols=96 Identities=14% Similarity=-0.054 Sum_probs=67.4
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|.+.- +-.+|++.+...+... ....++.+++++....+-+...- ..+++++..|+..+.++.
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v-~~~lA~~~~G~~~v~l~~ 119 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYL-AAWLGLAKLGAVVALLNT 119 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHhcCcEEeecCC
Confidence 4566776641 2347887776544333 33468889999988776665543 446788889999888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l 459 (551)
....+.+...+++.++..+.........+
T Consensus 120 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 120 QQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 66677889999999999998877655443
No 172
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.35 E-value=1.2e+02 Score=32.58 Aligned_cols=84 Identities=11% Similarity=0.007 Sum_probs=61.1
Q ss_pred EecchhhHHHHHHhh---hhc-CCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 375 PWTQLSSIRCTAEGW---AHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
.+|++.+...+.... ... ++.+++++....+-+.. .+..+++++..|+..+.++.......+...+++.+++.+.
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQ-FVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChH-HHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 478877755443332 334 89999998887765543 3344778888999998887666778899999999999998
Q ss_pred ecHHHHHHH
Q 008848 451 TVPSLVKAW 459 (551)
Q Consensus 451 ~~Ps~l~~l 459 (551)
..+.....+
T Consensus 114 ~~~~~~~~~ 122 (546)
T PRK08314 114 VGSELAPKV 122 (546)
T ss_pred EccchhhhH
Confidence 877665544
No 173
>PRK07529 AMP-binding domain protein; Validated
Probab=48.97 E-value=1.3e+02 Score=33.31 Aligned_cols=96 Identities=15% Similarity=0.083 Sum_probs=64.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|.+.+..+.. ..++..+|.+.+...+.. .....+++++|++...++-+...- ..+++++..| .++.++.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~-~~~lA~~~~G-i~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETH-FALWGGEAAG-IANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhC-EEEeCCC
Confidence 457777776543321 124566888877554433 334568999999988887665533 3356677777 3444454
Q ss_pred CCChhhHHHHHHHcCCcEEEec
Q 008848 431 SPLERSFGKFVQDAGVTVLGTV 452 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~ 452 (551)
...++.+..++++.++.++...
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 5577889999999999998875
No 174
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.85 E-value=99 Score=32.75 Aligned_cols=84 Identities=17% Similarity=0.065 Sum_probs=60.4
Q ss_pred EecchhhHHHH---HHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+ .......++++++++....+-+.+.- ..+++++..|+..+.++.......+...+++.+++.+..
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFF-EVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 36666654433 33334567899999988877765533 336788999999888876666778889999999999888
Q ss_pred cHHHHHHH
Q 008848 452 VPSLVKAW 459 (551)
Q Consensus 452 ~Ps~l~~l 459 (551)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 77665544
No 175
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.99 E-value=1.1e+02 Score=32.97 Aligned_cols=83 Identities=17% Similarity=0.093 Sum_probs=59.9
Q ss_pred EEecchhhHHHHHHhhh---h-cCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 008848 374 IPWTQLSSIRCTAEGWA---H-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (551)
Q Consensus 374 V~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l 449 (551)
..+|++.+...+..... . .++.++|++...++-+...- ..+|+.+..|+..+.++.....+++...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~-~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYP-VAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 35788887655544432 2 47899999988776665433 3467888999988887766667889999999999988
Q ss_pred EecHHHHH
Q 008848 450 GTVPSLVK 457 (551)
Q Consensus 450 ~~~Ps~l~ 457 (551)
........
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87655443
No 176
>PRK13391 acyl-CoA synthetase; Provisional
Probab=47.68 E-value=1.5e+02 Score=31.39 Aligned_cols=97 Identities=15% Similarity=0.050 Sum_probs=67.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|.+.+.+| -.+|.+.+...+... ....++.+++++..+.+-+...- ..+++.+..|+..+.++.
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~-~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYL-EVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhccEEecccc
Confidence 4566776655433 237777765444332 33457889999988776665433 336678889999888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l~~ 458 (551)
......+...+++.++..+...+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 6677889999999999998887766544
No 177
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=46.95 E-value=87 Score=31.90 Aligned_cols=67 Identities=16% Similarity=0.086 Sum_probs=52.5
Q ss_pred cCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHHHHHH
Q 008848 392 IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (551)
Q Consensus 392 ~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l 459 (551)
.++.++|++....+-+.. .+..+++++..|+..+..+.......+..++++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~-~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAE-LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 678899999887776644 2344678888999988887666778889999999999999887765544
No 178
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=46.70 E-value=1e+02 Score=37.75 Aligned_cols=98 Identities=15% Similarity=0.034 Sum_probs=65.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|++...+...+...+..+|++.+...+... ....++.+++++..+.+-+...- ..+++++..|+..+.++.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i-~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLV-VAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHH-HHHHHHHhhCcEEeccCC
Confidence 46777776432211111124468888776544433 34468899999988777765543 347788999999988876
Q ss_pred CCChhhHHHHHHHcCCcEEEec
Q 008848 431 SPLERSFGKFVQDAGVTVLGTV 452 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~ 452 (551)
...+..+..+++..++..+...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 6566778888999888877754
No 179
>PLN02614 long-chain acyl-CoA synthetase
Probab=46.48 E-value=1.8e+02 Score=32.45 Aligned_cols=85 Identities=5% Similarity=-0.161 Sum_probs=62.7
Q ss_pred EecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+. ......+++++|++...++-+.... ...++++..|+..|-+.....++++...+++.++.+++.
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~-~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~ 157 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWI-ISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFV 157 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEE
Confidence 467776654443 3334578999999887776665422 346788999999988876667889999999999999998
Q ss_pred cHHHHHHHH
Q 008848 452 VPSLVKAWR 460 (551)
Q Consensus 452 ~Ps~l~~l~ 460 (551)
....+..+.
T Consensus 158 ~~~~~~~~~ 166 (666)
T PLN02614 158 EEKKISELF 166 (666)
T ss_pred CHHHHHHHH
Confidence 877665554
No 180
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=46.35 E-value=89 Score=33.14 Aligned_cols=84 Identities=13% Similarity=0.088 Sum_probs=61.4
Q ss_pred EecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|++.+...+.. .....++.+++++....+-+...-. .+++++..|+..+.++.......+...+++.++..+..
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 103 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVT-AMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVT 103 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEE
Confidence 5788877654432 2334578899999887776665443 36688889998888776667788999999999999988
Q ss_pred cHHHHHHH
Q 008848 452 VPSLVKAW 459 (551)
Q Consensus 452 ~Ps~l~~l 459 (551)
.+..+..+
T Consensus 104 ~~~~~~~~ 111 (515)
T TIGR03098 104 SSERLDLL 111 (515)
T ss_pred ccchhhhh
Confidence 77655544
No 181
>PRK07514 malonyl-CoA synthase; Validated
Probab=46.21 E-value=1e+02 Score=32.69 Aligned_cols=86 Identities=13% Similarity=0.070 Sum_probs=62.2
Q ss_pred eEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 008848 373 AIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (551)
Q Consensus 373 gV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l 449 (551)
+..+|...+...+. ......++.++|++....+-+... +..+++++..|+..+.++.......+...+++.+++.+
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~-~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEA-LALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 44678776654443 333456889999998877666432 24467888999998888766677889999999999999
Q ss_pred EecHHHHHHH
Q 008848 450 GTVPSLVKAW 459 (551)
Q Consensus 450 ~~~Ps~l~~l 459 (551)
...+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 8887765543
No 182
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=46.03 E-value=1.3e+02 Score=32.36 Aligned_cols=94 Identities=11% Similarity=-0.042 Sum_probs=65.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++.. +..+|++.+...+.... ...++.++|++....+-+...- ..+++++..|+..+.++.
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~-~~~la~~~~G~~~v~v~~ 105 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYP-VAIAAVLRAGYVVVNVNP 105 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCeEEeccCc
Confidence 3466666531 24678888765544333 3457899999887766655433 335788899999988876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l~ 457 (551)
......+...+++.+++.+........
T Consensus 106 ~~~~~~~~~~~~~~~~~~vi~~~~~~~ 132 (557)
T PRK07059 106 LYTPRELEHQLKDSGAEAIVVLENFAT 132 (557)
T ss_pred ccCHHHHHHHHHccCceEEEEchhhHH
Confidence 666788999999999999887765543
No 183
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=45.96 E-value=1.7e+02 Score=32.59 Aligned_cols=119 Identities=9% Similarity=-0.062 Sum_probs=75.0
Q ss_pred CCCeEEEEe--cCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEec
Q 008848 355 VDAVVNILF--SSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (551)
Q Consensus 355 ~~~~a~iiy--TSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~ 429 (551)
++.+|+..- ..|..|.- ..+|.+.+...+.. .....++.++|++...++-+.... ...++++..|+..|-+.
T Consensus 56 p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~-~~~lA~~~~G~v~vpl~ 132 (660)
T PLN02430 56 PDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWI-VAMEACAAHSLICVPLY 132 (660)
T ss_pred CCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEec
Confidence 455665432 23333322 23577766554433 334568999999887776654422 33678899999888877
Q ss_pred CCCChhhHHHHHHHcCCcEEEecHHHHHHHHhcCccCCCCCCCccEEEee
Q 008848 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (551)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~g 479 (551)
....++++...++..++++++.....+..+++... ...+.++.++.-
T Consensus 133 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~---~~~~~l~~ii~~ 179 (660)
T PLN02430 133 DTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDC---KSAKRLKAIVSF 179 (660)
T ss_pred cCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhc---ccCCCceEEEEE
Confidence 66678899999999999999987765544443211 113456666554
No 184
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.34 E-value=1.1e+02 Score=33.13 Aligned_cols=84 Identities=11% Similarity=-0.032 Sum_probs=62.7
Q ss_pred EecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|++.+...+... ....+++.+|++....+-+.. .+..+++++..|+..+.++.....+.+...+.+.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 47887776554433 334678999999887776655 23447788899999888876667889999999999999998
Q ss_pred cHHHHHHH
Q 008848 452 VPSLVKAW 459 (551)
Q Consensus 452 ~Ps~l~~l 459 (551)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 185
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=44.74 E-value=1.2e+02 Score=32.57 Aligned_cols=96 Identities=18% Similarity=0.089 Sum_probs=65.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|.+--. + +..+|++.+...+... ....++.+++++....+-+.... ..+++++..|+..+.++.
T Consensus 41 ~p~~~a~~~~~---~----~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~ 112 (546)
T PLN02330 41 YADKVAFVEAV---T----GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG-IVALGIMAAGGVFSGANP 112 (546)
T ss_pred CCCccEEEecC---C----CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEeccCCc
Confidence 35666665211 2 2457888776554433 33467889999988776665433 336788999998887765
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l~ 457 (551)
.....++...+++.++..+...+..+.
T Consensus 113 ~~~~~~l~~~l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 113 TALESEIKKQAEAAGAKLIVTNDTNYG 139 (546)
T ss_pred cCCHHHHHHHHHhcCCeEEEEccchhh
Confidence 556678889999999988877665443
No 186
>PRK08316 acyl-CoA synthetase; Validated
Probab=44.68 E-value=1.1e+02 Score=32.55 Aligned_cols=86 Identities=13% Similarity=0.072 Sum_probs=62.9
Q ss_pred EEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
..+|...+...+... ....++.+++++....+-+... +..+++++..|+..+.++.......+...+++.++..+.
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAY-ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 457777765544333 2345788999998887776653 344678889999888887666778899999999999998
Q ss_pred ecHHHHHHHH
Q 008848 451 TVPSLVKAWR 460 (551)
Q Consensus 451 ~~Ps~l~~l~ 460 (551)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665543
No 187
>PLN03102 acyl-activating enzyme; Provisional
Probab=44.50 E-value=94 Score=33.86 Aligned_cols=93 Identities=14% Similarity=0.005 Sum_probs=65.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|.+. .| -.+|.+.+...+.... ...++.++|++...++-+...- ..+|+.+..|+..+.++.
T Consensus 27 ~p~~~Al~~--~~-------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~-~~~la~~~~G~~~vpl~~ 96 (579)
T PLN03102 27 YPNRTSIIY--GK-------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMY-EMHFAVPMAGAVLNPINT 96 (579)
T ss_pred CCCCeEEEE--CC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHhcCcEEeeccc
Confidence 456667653 11 2478777765544333 3468999999988777654332 346788889998888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l 456 (551)
....+.+...+++.+++.+...+...
T Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (579)
T PLN03102 97 RLDATSIAAILRHAKPKILFVDRSFE 122 (579)
T ss_pred cCCHHHHHHHHhccCCeEEEEChhhH
Confidence 67788999999999999988766543
No 188
>PRK06164 acyl-CoA synthetase; Validated
Probab=44.14 E-value=1.2e+02 Score=32.50 Aligned_cols=91 Identities=15% Similarity=0.033 Sum_probs=63.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++ . +.-.+|.+.+...+. ......++.+++++....+-+...- ..+++.+..|+..+.++.
T Consensus 23 ~p~~~a~~--~-------~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 92 (540)
T PRK06164 23 RPDAVALI--D-------EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWV-VLFLACARLGATVIAVNT 92 (540)
T ss_pred CCCCeEEe--c-------CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHH-HHHHHHHHhCcEEEecCC
Confidence 35667766 1 123478777754433 3334568889999988776665433 346788899999988876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
......+...+++.+++.+...+.
T Consensus 93 ~~~~~~l~~~i~~~~~~~ii~~~~ 116 (540)
T PRK06164 93 RYRSHEVAHILGRGRARWLVVWPG 116 (540)
T ss_pred CCCcHHHHHHHHhcCccEEEEccc
Confidence 666788999999999998887654
No 189
>PRK12583 acyl-CoA synthetase; Provisional
Probab=43.53 E-value=3.3e+02 Score=29.15 Aligned_cols=99 Identities=9% Similarity=0.185 Sum_probs=67.7
Q ss_pred CCCCceEEEEecCCCCCCC--ceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCeEEe
Q 008848 188 KEDNTVAIVWREDRCDESA--VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~--~~e~vva~lA~~~~Ga~~vp 262 (551)
..++.+|.+....|. +|. ...+|++.+...+..+... . ++++|++...++- ....+..+++.+..|+..+.
T Consensus 198 ~~~~~~a~i~~TSGs-TG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~ 273 (558)
T PRK12583 198 LDRDDPINIQYTSGT-TGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVY 273 (558)
T ss_pred cCCCCcEEEEECCCC-CCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEe
Confidence 345667766544432 232 3467888886544443322 3 7899999887764 35566778888999998874
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecce
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDFI 290 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 290 (551)
......+.++...+++.++..++..+..
T Consensus 274 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~ 301 (558)
T PRK12583 274 PNEAFDPLATLQAVEEERCTALYGVPTM 301 (558)
T ss_pred ecCCCCHHHHHHHHHHcCCeEEeccHHH
Confidence 4555778888899999999998876643
No 190
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=43.24 E-value=11 Score=41.09 Aligned_cols=30 Identities=30% Similarity=0.335 Sum_probs=24.8
Q ss_pred CCCCCeEEEEecCCCC-CCCceEEecchhhH
Q 008848 353 NPVDAVVNILFSSGTT-GEPKAIPWTQLSSI 382 (551)
Q Consensus 353 ~~~~~~a~iiyTSGTT-G~PKgV~~sh~~l~ 382 (551)
..++.+.+...||||| |++|-+.+|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 3456778999999999 89999999996543
No 191
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=43.12 E-value=1.6e+02 Score=31.59 Aligned_cols=97 Identities=15% Similarity=0.129 Sum_probs=64.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|++.+-..+ ..+..+|.+.+...+.. .....++.+++++....+-+...- ..+++.+..|+..+..+.
T Consensus 35 ~p~~~a~~~~~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~ 110 (538)
T TIGR03208 35 CPDKPALTAYRDGH---GAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFT-ALYLACARIGAVLNPLMP 110 (538)
T ss_pred CCCceEEEeecccC---CCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHhcCEEEeccCc
Confidence 35667776542211 11346788777554433 333467889999988776655433 336788889988887765
Q ss_pred CCChhhHHHHHHHcCCcEEEecHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
....+.+...++..+++.+...+.
T Consensus 111 ~~~~~~l~~~l~~~~~~~li~~~~ 134 (538)
T TIGR03208 111 IFRERELSFMLNHADSKVFVVPSV 134 (538)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 556778889999999988887553
No 192
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=42.79 E-value=21 Score=38.78 Aligned_cols=28 Identities=36% Similarity=0.567 Sum_probs=23.8
Q ss_pred CCCCeEEEEecCCCCC-CCceEEecchhh
Q 008848 354 PVDAVVNILFSSGTTG-EPKAIPWTQLSS 381 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG-~PKgV~~sh~~l 381 (551)
.++.+.+..-|||||| ++|-+.+++..+
T Consensus 87 t~~pi~~F~~SSGTT~g~~K~IP~t~e~l 115 (606)
T PLN02247 87 SAQPITELLTSSGTSGGQPKLMPSTAEEL 115 (606)
T ss_pred CCCCcceeeccCCCCCCceeEeeccHHHH
Confidence 3566789999999995 899999998764
No 193
>PLN02574 4-coumarate--CoA ligase-like
Probab=42.63 E-value=1.2e+02 Score=32.82 Aligned_cols=98 Identities=20% Similarity=0.124 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHH---HHhhhh-cCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEec
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~---~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~ 429 (551)
.++.+|++- +.+|. .+|.+.+.... ...... .+++++|++....+-+...- ..+++++..|+..+.++
T Consensus 52 ~~~~~a~~~---~~~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALID---SSTGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFP-VIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEE---CCCCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHH-HHHHHHHHhCeEEeCcC
Confidence 346666653 32332 46777664433 333334 78899999988776554332 33678889999988877
Q ss_pred CCCChhhHHHHHHHcCCcEEEecHHHHHHH
Q 008848 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (551)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l 459 (551)
......++...+++.++..++..+..+..+
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 666677889999999999888887766554
No 194
>PRK09088 acyl-CoA synthetase; Validated
Probab=42.47 E-value=1.9e+02 Score=30.36 Aligned_cols=92 Identities=12% Similarity=0.014 Sum_probs=63.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.++++-...| ..+|.+.+...+.. .....++.+++++...++-+...- ..+++++..|+..+.++.
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~-~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLV-ALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCeEEEeeCc
Confidence 3566665433223 34788777554433 333567889999887776665532 346788889988888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVP 453 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P 453 (551)
......+...+++.+++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcc
Confidence 66778899999999999887654
No 195
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=42.37 E-value=1.1e+02 Score=33.17 Aligned_cols=81 Identities=17% Similarity=0.115 Sum_probs=57.4
Q ss_pred EEecchhhHHHHHHhhh---h-cCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 008848 374 IPWTQLSSIRCTAEGWA---H-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (551)
Q Consensus 374 V~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l 449 (551)
..+|...+...+..... . .+++++|++..+.+-+.. .+..+++++..|+..+.++.......+...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 35788777555443332 2 378899999887766654 334467888899888877655667889999999999888
Q ss_pred EecHHH
Q 008848 450 GTVPSL 455 (551)
Q Consensus 450 ~~~Ps~ 455 (551)
...+..
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 776543
No 196
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.88 E-value=2e+02 Score=31.10 Aligned_cols=99 Identities=13% Similarity=-0.032 Sum_probs=68.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhh----hcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEec
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~ 429 (551)
.++..+.+.. +. ..-.+|.+.+...+..... ..+++++|++....+-+...- ..+++.+..|+..+.++
T Consensus 23 ~~~~~a~~~~-----~~-~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~-~~~lA~~~~G~~~v~l~ 95 (576)
T PRK05620 23 HGDTTVTTWG-----GA-EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHL-EVLFAVACMGAVFNPLN 95 (576)
T ss_pred CCCceEEEEc-----CC-ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCCEEeecc
Confidence 4566665532 11 2345777777554433322 368889999988777665433 34678889999888887
Q ss_pred CCCChhhHHHHHHHcCCcEEEecHHHHHHH
Q 008848 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (551)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l 459 (551)
.......+...++..++..+...+.....+
T Consensus 96 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 96 KQLMNDQIVHIINHAEDEVIVADPRLAEQL 125 (576)
T ss_pred cccCHHHHHHHHhccCCcEEEEChhhHHHH
Confidence 666778899999999999999887665544
No 197
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.80 E-value=1.6e+02 Score=31.69 Aligned_cols=99 Identities=13% Similarity=0.070 Sum_probs=64.1
Q ss_pred CCCCceEEEEecCCCCCCCc--eEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHH-HHHHHHHhCCeEEe
Q 008848 188 KEDNTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVI-IYLAIILAGYVVVS 262 (551)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~vv-a~lA~~~~Ga~~vp 262 (551)
..++.+|.+....| .+|.. ..+|.+.+.. +..+..+.. . +.++|++..++|-...+.. .+++.+..|+..+.
T Consensus 173 ~~~~~~~~i~~TSG-TTG~PK~v~~s~~~~~~--~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~ 249 (539)
T PRK07008 173 FDENQASSLCYTSG-TTGNPKGALYSHRSTVL--HAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVL 249 (539)
T ss_pred CCcccceEEEECCC-CCCCCcEEEEecHHHHH--HHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEE
Confidence 34566766655443 23333 3566666542 223333433 3 7899999887775433222 33677889998877
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecc
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
..+...++.+..++++.++..+...+.
T Consensus 250 ~~~~~~~~~~~~~l~~~~vt~~~~~P~ 276 (539)
T PRK07008 250 PGPDLDGKSLYELIEAERVTFSAGVPT 276 (539)
T ss_pred ecCCcCHHHHHHHHHHcCCEEEEechH
Confidence 677788999999999999999887664
No 198
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=41.67 E-value=2.4e+02 Score=24.67 Aligned_cols=112 Identities=9% Similarity=-0.045 Sum_probs=67.7
Q ss_pred eEEecchhhHHHHHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhH---HHHHHHcCCcEE
Q 008848 373 AIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSF---GKFVQDAGVTVL 449 (551)
Q Consensus 373 gV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~---~~~i~~~~vt~l 449 (551)
-.++.+.+++..+... + .....-+.+++=....+...++--|...++-+.+.+++|++-+ ..++++++-+.+
T Consensus 21 V~VvENp~Vf~~~~~~---~--~~~~~pLVCt~G~p~~A~~~LL~~L~~~g~~l~y~GDfDp~Gl~IA~~l~~r~~~~~W 95 (152)
T PF09664_consen 21 VYVVENPAVFSALADE---L--GASCPPLVCTSGQPSAAARRLLDRLAAAGARLYYSGDFDPEGLRIANRLIQRYGARPW 95 (152)
T ss_pred EEEEecHHHHHHHHHh---c--CCCCCeEEEcCCcHHHHHHHHHHHHHhCCCEEEEecCCCHHHHHHHHHHHHHhCCccc
Confidence 5667888887776544 2 2234434333333344445555666665566666788988643 357888999999
Q ss_pred EecHHHHHHHHhcCccCCCCCCCccEEEeecCCCChhhHHHHHHh
Q 008848 450 GTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (551)
Q Consensus 450 ~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~ 494 (551)
.+.+.-+.............+. ++.+ .+..+++...+++.
T Consensus 96 rm~~~dY~~~~~~~~~~~~~l~-l~~v----~p~~~~L~~~m~~~ 135 (152)
T PF09664_consen 96 RMDAEDYLAALSAEPLSGRRLK-LPNV----APWLPELAEAMRER 135 (152)
T ss_pred cCCHHHHHHhccccCCCCCcCC-cccC----ChhcHHHHHHHHHh
Confidence 9999888766654433333333 3322 45667777777654
No 199
>PRK13390 acyl-CoA synthetase; Provisional
Probab=41.58 E-value=2.3e+02 Score=29.86 Aligned_cols=93 Identities=18% Similarity=0.116 Sum_probs=64.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|++.. .+| ..+|.+.+...+.. .....++.++|++....+-+.+.- ..+++.+..|+..+.++.
T Consensus 10 ~p~~~a~~~~---~~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~-~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVA---ETG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEAL-VVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEec---CCC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHhCCEEecccc
Confidence 4566666542 122 35888877554443 334567899999988777766533 346788899998888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
...+..+..++++.++..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 667778888899888888776543
No 200
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=41.51 E-value=2.3e+02 Score=24.30 Aligned_cols=46 Identities=11% Similarity=-0.007 Sum_probs=32.1
Q ss_pred ccchhhHHHHHH-HHhCCEEEEecCCCChhhHHHHHHHcCCcEEEec
Q 008848 407 GWVMGPVILFSS-FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (551)
Q Consensus 407 ~~~~~~~~~~~~-l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~ 452 (551)
.|+.|...+... =..|..++..-....++++.+.+.++++.++.++
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS 61 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVS 61 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 467776433222 2467777766545567899999999999987775
No 201
>PRK08162 acyl-CoA synthetase; Validated
Probab=40.51 E-value=1.3e+02 Score=32.39 Aligned_cols=84 Identities=14% Similarity=-0.044 Sum_probs=62.3
Q ss_pred EecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+.... ...++.++|++....+-+...- ..+++.+..|+..+.++.......+...+++.+++.+..
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMV-EAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 478887765544333 3457899999988877765433 336778889988888776667788999999999999988
Q ss_pred cHHHHHHH
Q 008848 452 VPSLVKAW 459 (551)
Q Consensus 452 ~Ps~l~~l 459 (551)
.+..+..+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87665544
No 202
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=40.50 E-value=86 Score=23.83 Aligned_cols=64 Identities=25% Similarity=0.280 Sum_probs=50.0
Q ss_pred EecHHHHHHHHHHHHH---HHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceE
Q 008848 209 LMTYKELREQVMLVAN---ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKG 283 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~---~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~ 283 (551)
..||+||++.-..+++ +|.+. ++.+|-|+|+-=++-.. .-.+-++-.-+.++++.-+++.++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 6899999998876654 46677 99999999987665422 23456777888999999999998876
No 203
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=40.43 E-value=2.8e+02 Score=29.84 Aligned_cols=93 Identities=18% Similarity=0.103 Sum_probs=65.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|.+...-+. .+|++.+...+.... ...++.++|++...++-+...- ..+|+++..|+..+.++.
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~-~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFL-IAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHhcCEEEeecCc
Confidence 45666666543332 788888766554333 3345789999877766554322 346788889999998876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
...+.++...++..++..+.....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 667788888899989999888876
No 204
>PRK13382 acyl-CoA synthetase; Provisional
Probab=40.11 E-value=1.6e+02 Score=31.66 Aligned_cols=82 Identities=12% Similarity=-0.050 Sum_probs=59.3
Q ss_pred EecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|...+...+.. .....++.+++++...++-+.. .+..+|+.+..|+..+.++......++...+++.++..+..
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 4777766544433 3334678999999887766654 33457788899999988876666678899999999999887
Q ss_pred cHHHHH
Q 008848 452 VPSLVK 457 (551)
Q Consensus 452 ~Ps~l~ 457 (551)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 655443
No 205
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=39.76 E-value=1.6e+02 Score=32.67 Aligned_cols=86 Identities=9% Similarity=-0.086 Sum_probs=63.3
Q ss_pred EEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
..+|.+.+...+.. .....+++++|++...++-+...- ...++++..|+..+-+......+++...+++.++.+++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWI-IAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 35788777554433 334568999999888776665433 33678899999988887666778899999999999999
Q ss_pred ecHHHHHHHH
Q 008848 451 TVPSLVKAWR 460 (551)
Q Consensus 451 ~~Ps~l~~l~ 460 (551)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8776655543
No 206
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=39.35 E-value=79 Score=28.59 Aligned_cols=44 Identities=9% Similarity=0.002 Sum_probs=34.8
Q ss_pred EecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHH
Q 008848 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAI 253 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~ 253 (551)
-+||.|+.+.+.++|..+.+. -.+. .+.|...++-..++..||-
T Consensus 16 ~~s~~~i~~~i~~la~~i~~~~~~~~-~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 16 LVSAAEVEAAIDRMADEITADLADEN-PLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred eecHHHHHHHHHHHHHHHHHHcCCCC-eEEEEECCCcHHHHHHHHH
Confidence 799999999999999999887 3333 4667777777777777763
No 207
>PLN02479 acetate-CoA ligase
Probab=39.27 E-value=1.7e+02 Score=31.75 Aligned_cols=93 Identities=10% Similarity=-0.002 Sum_probs=66.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.+|++. +. ..+|.+.+...+.. .....++.++|++....+-+.+.- ..+++++..|+..+.++.
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~~ 102 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMY-EAHFGVPMAGAVVNCVNI 102 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH-HHHHHHHhCCcEEEEecc
Confidence 456666653 21 24677766554433 334468999999988777665433 336788899998888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l 456 (551)
......+...+++.++..+...+..+
T Consensus 103 ~~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 103 RLNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhh
Confidence 66778899999999999998877654
No 208
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=37.82 E-value=1.4e+02 Score=30.88 Aligned_cols=66 Identities=17% Similarity=0.126 Sum_probs=51.2
Q ss_pred hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHH
Q 008848 388 GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 454 (551)
Q Consensus 388 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps 454 (551)
.....++.++|++....+-+.+ .+..+++.+..|+..+.++.......+...+++.++..+...+.
T Consensus 15 ~l~~~g~~~gd~v~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 15 ALKAQGIRSGSRVALVGQNSIE-MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 3345688999999888777754 33447788999999988876667788889999999998876554
No 209
>PRK07470 acyl-CoA synthetase; Validated
Probab=37.73 E-value=1.7e+02 Score=31.27 Aligned_cols=82 Identities=13% Similarity=0.049 Sum_probs=59.4
Q ss_pred EEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
..+|.+.+...+. ......++.+++++....+-+.... ..+++++..|+..+.++.......+...+++.+++.+.
T Consensus 31 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i 109 (528)
T PRK07470 31 RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMF-ESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMI 109 (528)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEE
Confidence 3577777655443 3334567889999988776665433 33678888999888887666778899999999999998
Q ss_pred ecHHHH
Q 008848 451 TVPSLV 456 (551)
Q Consensus 451 ~~Ps~l 456 (551)
..+...
T Consensus 110 ~~~~~~ 115 (528)
T PRK07470 110 CHADFP 115 (528)
T ss_pred EcchhH
Confidence 876543
No 210
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=37.32 E-value=1.4e+02 Score=31.64 Aligned_cols=84 Identities=14% Similarity=0.108 Sum_probs=60.5
Q ss_pred EecchhhHHH---HHHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|...+... +.......++.+++++..+.+-+...- ..+++.+..|+..+.++.......+...+++.+++.+..
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFF-EAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 3566655433 333334568899999988877765433 446678889999888876667788999999999999988
Q ss_pred cHHHHHHH
Q 008848 452 VPSLVKAW 459 (551)
Q Consensus 452 ~Ps~l~~l 459 (551)
.......+
T Consensus 90 ~~~~~~~~ 97 (509)
T PRK12406 90 HADLLHGL 97 (509)
T ss_pred ccchhhhh
Confidence 77666544
No 211
>PLN03051 acyl-activating enzyme; Provisional
Probab=36.60 E-value=2.8e+02 Score=29.38 Aligned_cols=98 Identities=9% Similarity=-0.024 Sum_probs=65.2
Q ss_pred CCCceEEEEecCCCCCCC--ceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH-HHHHHHHHHHhCCeEEecC
Q 008848 189 EDNTVAIVWREDRCDESA--VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR-AVIIYLAIILAGYVVVSIA 264 (551)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e-~vva~lA~~~~Ga~~vpl~ 264 (551)
.|+.+|++....|. +|. ...+|++.+...+.. ..... +.++|++...+|-+.. .+..+++.+..|+..+...
T Consensus 117 ~~~d~a~i~yTSGT-TG~PKgV~~sh~~~~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 117 PVESVTNILFSSGT-TGEPKAIPWTHLSPLRCASD---GWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred CccceEEEEeCCCC-CCCCceEEEccchHHHHHHH---HHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 35677777655432 232 235787776543322 22344 8889998777765432 1235778889999988776
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecce
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFI 290 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~ 290 (551)
....++++...+++.++.++..-+..
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~ 218 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSI 218 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHH
Confidence 55567889999999999999887654
No 212
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=36.25 E-value=1.3e+02 Score=32.68 Aligned_cols=79 Identities=14% Similarity=-0.039 Sum_probs=58.1
Q ss_pred EecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+.. .....+++++|++...++-+...- ..+++++..|+..+.++.....+++...+++.+++.+..
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~-~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYL-EWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 4777776554433 334468999999988777665433 336788889999888876667788999999999988887
Q ss_pred cHH
Q 008848 452 VPS 454 (551)
Q Consensus 452 ~Ps 454 (551)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 553
No 213
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=36.01 E-value=2.1e+02 Score=30.23 Aligned_cols=96 Identities=8% Similarity=-0.031 Sum_probs=64.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|++- + +-.+|...+...+. ......++++++++....+-+.. .+..+++++..|+..+.++.
T Consensus 18 ~p~~~a~~~--~-------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~ 87 (508)
T TIGR02262 18 RGGKTAFID--D-------ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVD-FPIAFLGAIRAGIVPVALNT 87 (508)
T ss_pred cCCceEEEe--C-------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeeccC
Confidence 456677652 1 12467766654333 22335678899998776655433 22446778889998888876
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l 459 (551)
......+...+++.+++.+.........+
T Consensus 88 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~ 116 (508)
T TIGR02262 88 LLTADDYAYMLEDSRARVVFVSGELLPVI 116 (508)
T ss_pred CCCHHHHHHHHHhcCCeEEEEchhhHHHH
Confidence 66788899999999999998876655433
No 214
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=34.89 E-value=39 Score=36.84 Aligned_cols=30 Identities=33% Similarity=0.357 Sum_probs=24.6
Q ss_pred CCCCeEEEEecCCCCC-CCceEEecchhhHH
Q 008848 354 PVDAVVNILFSSGTTG-EPKAIPWTQLSSIR 383 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG-~PKgV~~sh~~l~~ 383 (551)
.++.+.+..-|||||| ++|-+.+++..+-+
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 3566778999999997 69999999986544
No 215
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=33.78 E-value=4.4e+02 Score=28.78 Aligned_cols=101 Identities=16% Similarity=0.045 Sum_probs=64.1
Q ss_pred CCCCeEEEEec--CCCCCCCceEEecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEe
Q 008848 354 PVDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (551)
Q Consensus 354 ~~~~~a~iiyT--SGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~ 428 (551)
.++.+|++.-. .+++|. ...+|.+.+...+.... ... +.++|++...++-+... +..+++++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhH-HHHHHHHHHcCceeEec
Confidence 35667765421 112332 34578877655443322 223 78999998877776542 23467888999988766
Q ss_pred -cCCCC--hhhHHHHHHHcCCcEEEecHHHHHH
Q 008848 429 -QGSPL--ERSFGKFVQDAGVTVLGTVPSLVKA 458 (551)
Q Consensus 429 -~~~~~--~~~~~~~i~~~~vt~l~~~Ps~l~~ 458 (551)
+.... .+.+...|++.++..+...+.....
T Consensus 123 ~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 123 FAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 32222 5678899999999999987765543
No 216
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=33.78 E-value=1.5e+02 Score=31.94 Aligned_cols=84 Identities=13% Similarity=-0.003 Sum_probs=60.4
Q ss_pred EEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
..+|.+.+....... ....++.++|++..+.+-+...-. .+++.+..|+..+.++.....+.+...+++.++..+.
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLE-AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH-HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 457888775544333 334688999999887776665443 3667888999888887666678899999999999988
Q ss_pred ecHHHHHH
Q 008848 451 TVPSLVKA 458 (551)
Q Consensus 451 ~~Ps~l~~ 458 (551)
........
T Consensus 117 ~~~~~~~~ 124 (542)
T PRK06018 117 TDLTFVPI 124 (542)
T ss_pred EccccHHH
Confidence 76544433
No 217
>PRK05850 acyl-CoA synthetase; Validated
Probab=33.69 E-value=5.1e+02 Score=27.91 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=65.5
Q ss_pred CCCCeEEEEecCCCCCCCc--eEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEe
Q 008848 354 PVDAVVNILFSSGTTGEPK--AIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PK--gV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~ 428 (551)
.++.+|++.... .+.++ ...+|++.+...+... ....+ .++|++...++-+...- ..+++++..|+..+.+
T Consensus 14 ~p~~~a~~~~~~--~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~-~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDY--EQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYI-VAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEcc--CCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHH-HHHHHHHHcCceEEec
Confidence 456666653211 12222 2467888775544332 23345 57899888777665433 3367888999998887
Q ss_pred cCC---CChhhHHHHHHHcCCcEEEecHHHHHHH
Q 008848 429 QGS---PLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (551)
Q Consensus 429 ~~~---~~~~~~~~~i~~~~vt~l~~~Ps~l~~l 459 (551)
+.. .....+...|++.++..+...+.....+
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 632 2456788899999999999888766554
No 218
>PRK06178 acyl-CoA synthetase; Validated
Probab=33.65 E-value=2.3e+02 Score=30.64 Aligned_cols=85 Identities=15% Similarity=0.007 Sum_probs=62.0
Q ss_pred EecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|...+...+... ....++++++++....+-+...- ..+++.+..|+..+.++.......+...+++.++..+..
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH-IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH-HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 47887775544333 23467889999887776666533 446778889988887765566778999999999999999
Q ss_pred cHHHHHHHH
Q 008848 452 VPSLVKAWR 460 (551)
Q Consensus 452 ~Ps~l~~l~ 460 (551)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887765543
No 219
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=33.33 E-value=3.8e+02 Score=24.54 Aligned_cols=90 Identities=13% Similarity=-0.000 Sum_probs=51.7
Q ss_pred CEEEEecCc--ccchhhHHHHHH-HHhCCEEEEecCCCChhhHHHHHHHcCCcEEEecHHH------HHHHHhcCccCCC
Q 008848 398 DVYCWPTNL--GWVMGPVILFSS-FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSL------VKAWRNTNCLEGL 468 (551)
Q Consensus 398 d~~l~~~~~--~~~~~~~~~~~~-l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~Ps~------l~~l~~~~~~~~~ 468 (551)
.+++..+.. .|+.|...+-.. =..|-.++..-.+..++++.+.++++++.++.++-++ +..+.+......
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~- 163 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG- 163 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC-
Confidence 345544444 577776433222 2467777766545567899999999999987776332 122222111110
Q ss_pred CCCCccEEEeecCCCChhhHH
Q 008848 469 DWTKIRSFASTGETSNVDDDL 489 (551)
Q Consensus 469 ~l~sLr~i~~gGe~l~~~~~~ 489 (551)
..+.++ +++||.+++++..+
T Consensus 164 ~~~~v~-i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 164 YRDSVK-FMVGGAPVTQDWAD 183 (197)
T ss_pred CCCCCE-EEEEChhcCHHHHH
Confidence 012333 77899998875433
No 220
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=32.14 E-value=2.1e+02 Score=30.19 Aligned_cols=46 Identities=11% Similarity=0.034 Sum_probs=32.5
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHH-HHHhCCeEEec--------------CCCCCHHHHHHHHHhcC
Q 008848 230 FSKGDAIAIDMPMTVRAVIIYLA-IILAGYVVVSI--------------ADSFAAREIATRLRVSK 280 (551)
Q Consensus 230 v~~gd~V~i~~~~~~e~vva~lA-~~~~Ga~~vpl--------------~~~~~~~~l~~~l~~~~ 280 (551)
+++||.| .+..++.+.-+ +...|++++=+ .-....+.++..|+...
T Consensus 114 v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 114 IKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred CCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 8999965 44445555555 88899987733 34467889999887643
No 221
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.02 E-value=2.2e+02 Score=30.74 Aligned_cols=80 Identities=18% Similarity=0.099 Sum_probs=56.6
Q ss_pred EecchhhHHHHHHhhh----hcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 375 PWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
.+|...+......... ..++.+++++....+-.... +..+++++..|+..+.++.......+...+++.+++.+.
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY-PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 5677776554433332 35788999988776555332 234678889999999887666678899999999999988
Q ss_pred ecHHH
Q 008848 451 TVPSL 455 (551)
Q Consensus 451 ~~Ps~ 455 (551)
+.+..
T Consensus 127 ~~~~~ 131 (560)
T PRK08974 127 IVSNF 131 (560)
T ss_pred Eeccc
Confidence 76543
No 222
>PRK08308 acyl-CoA synthetase; Validated
Probab=32.01 E-value=5.7e+02 Score=26.11 Aligned_cols=97 Identities=10% Similarity=0.124 Sum_probs=67.4
Q ss_pred CCCceEEEEecCCCCCCC--ceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCCeEEec
Q 008848 189 EDNTVAIVWREDRCDESA--VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSI 263 (551)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~--e~vva~lA~~~~Ga~~vpl 263 (551)
.++.+|++....|. +|. ...+|++.+...+..+.. .. ++.+|++...+|-.. .++..++..+..|+..+..
T Consensus 99 ~~~~~~~i~~TSGt-TG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~ 174 (414)
T PRK08308 99 LAEEPSLLQYSSGT-TGEPKLIRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVII 174 (414)
T ss_pred CCCCceEEEECCCC-CCCCcEEEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEec
Confidence 45677777655432 233 336799888765544443 34 788899888877654 4456788899999987766
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecce
Q 008848 264 ADSFAAREIATRLRVSKAKGIFTQDFI 290 (551)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~vl~~~~~ 290 (551)
+ ...++.+...+++.++.+++..+..
T Consensus 175 ~-~~~~~~~~~~l~~~~~t~~~~~P~~ 200 (414)
T PRK08308 175 T-NKNPKFALNILRNTPQHILYAVPLM 200 (414)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEcCHHH
Confidence 4 4567788888999999988877643
No 223
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=31.49 E-value=1.6e+02 Score=30.07 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=40.0
Q ss_pred HHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC-----CCHHHHHHHHHhcCceEEEee
Q 008848 225 ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (551)
Q Consensus 225 ~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~-----~~~~~l~~~l~~~~~~~vl~~ 287 (551)
.+... +++||.|.+-.+..+. ..-++...|+.++.++.+ ...+.++..+.. ++++|+..
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~~---~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFVS---TANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcHH---HHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 34455 8999999887665443 445667889987776543 457788887754 66766644
No 224
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=31.33 E-value=1.4e+02 Score=30.46 Aligned_cols=60 Identities=18% Similarity=0.163 Sum_probs=39.5
Q ss_pred HHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC-----CCHHHHHHHHHhcCceEEEee
Q 008848 224 NALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (551)
Q Consensus 224 ~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~-----~~~~~l~~~l~~~~~~~vl~~ 287 (551)
..++.. +++||.|.+-.+. +....-++...|+.++.++.+ ...+.++..+.. +.++|+..
T Consensus 61 ~~l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 61 MAALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 345556 8999998875554 444556667889887776643 346677776653 66776643
No 225
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=31.05 E-value=1.7e+02 Score=31.38 Aligned_cols=90 Identities=11% Similarity=-0.008 Sum_probs=61.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.++++ +. +| ..+|.+.+...+... ....++.++|++....+-+.. .+..+++++..|+..+.++.
T Consensus 36 ~pd~~a~~-~~---~~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 36 MPDKIAVV-DN---HG----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCE-FTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred CCCceEEE-cC---CC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccch
Confidence 45666755 32 22 347887775544333 334688999999877665543 23447788999998888776
Q ss_pred CCChhhHHHHHHHcCCcEEEec
Q 008848 431 SPLERSFGKFVQDAGVTVLGTV 452 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~ 452 (551)
.....++...++..++.++...
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEe
Confidence 6667788899999999887764
No 226
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=30.67 E-value=56 Score=31.19 Aligned_cols=68 Identities=26% Similarity=0.272 Sum_probs=54.3
Q ss_pred HHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCC--HHHHHHHHHh-cCceEEEeecc
Q 008848 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA--AREIATRLRV-SKAKGIFTQDF 289 (551)
Q Consensus 222 lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~--~~~l~~~l~~-~~~~~vl~~~~ 289 (551)
+-..+.+. .-||.-=.+.+|.+..+.+.--++.-++.+-+|++|++. .+++..+++. +.+|+++....
T Consensus 98 ~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSP 169 (375)
T KOG0633|consen 98 LIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSP 169 (375)
T ss_pred HHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCC
Confidence 33455666 778855567788899999888899999999999999886 6788888765 59999987754
No 227
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=30.55 E-value=2.8e+02 Score=29.05 Aligned_cols=93 Identities=17% Similarity=0.045 Sum_probs=65.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|++.. .-.+|++.+...+... ....++.+++++....+-+.+. +..+++.+..|+..+.++.
T Consensus 15 ~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~i~~ 84 (483)
T PRK03640 15 TPDRTAIEFE---------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEM-ILVIHALQQLGAVAVLLNT 84 (483)
T ss_pred CCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhCCcEEEecCc
Confidence 4567776531 1347887775544333 2346788999998887777653 3457788999999998886
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l 456 (551)
......+...+++.++..+.......
T Consensus 85 ~~~~~~~~~~~~~~~~~~vi~~~~~~ 110 (483)
T PRK03640 85 RLSREELLWQLDDAEVKCLITDDDFE 110 (483)
T ss_pred CCCHHHHHHHHHhCCCCEEEEcchhh
Confidence 66778888999999998887665443
No 228
>PRK06188 acyl-CoA synthetase; Validated
Probab=30.32 E-value=2.1e+02 Score=30.44 Aligned_cols=80 Identities=14% Similarity=0.035 Sum_probs=58.3
Q ss_pred EEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 374 IPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 374 V~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
..+|.+.+...+... ....++.+++++....+-+.... ..+++.+..|+..+.++.......+...++..+++.+.
T Consensus 36 ~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~ 114 (524)
T PRK06188 36 TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVL-MAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLI 114 (524)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEE
Confidence 357777775544333 33467889999888776665433 33667889999999887666677888999999999988
Q ss_pred ecHH
Q 008848 451 TVPS 454 (551)
Q Consensus 451 ~~Ps 454 (551)
..+.
T Consensus 115 ~~~~ 118 (524)
T PRK06188 115 VDPA 118 (524)
T ss_pred Eecc
Confidence 8776
No 229
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=30.07 E-value=5.9e+02 Score=28.56 Aligned_cols=98 Identities=13% Similarity=0.161 Sum_probs=66.5
Q ss_pred CCCCceEEEEecCCCCCCC--ceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCC--HHHHHHHHHHHHhCCeEEe
Q 008848 188 KEDNTVAIVWREDRCDESA--VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVS 262 (551)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~--~e~vva~lA~~~~Ga~~vp 262 (551)
..++.+|++....| .+|. ...+|++.+...+..+.. .. +.++|++...+|-. ..+...+++.+..|+..+.
T Consensus 362 ~~~~d~a~i~~TSG-TTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 362 QQPEDAALILFTSG-SEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCCeEEEEECCC-CCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 35678887765543 2333 336888888665544432 34 88999998888853 3445567889999998886
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecc
Q 008848 263 IADSFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
.+.......+...+.+.++..+...+.
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p~ 464 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTST 464 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchHH
Confidence 654445566677788888888876554
No 230
>PRK07867 acyl-CoA synthetase; Validated
Probab=30.05 E-value=2.8e+02 Score=29.65 Aligned_cols=83 Identities=11% Similarity=-0.048 Sum_probs=58.6
Q ss_pred EecchhhHHHHHHhh---hh-cCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEE
Q 008848 375 PWTQLSSIRCTAEGW---AH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~ 450 (551)
.+|.+.+...+.... .. .+..+++++....+-+.... ..+++++..|+..+.++....++.+...+++.++..+.
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFS-LLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 478777655443332 22 35677888877666554333 34678899999999887666778899999999999999
Q ss_pred ecHHHHHH
Q 008848 451 TVPSLVKA 458 (551)
Q Consensus 451 ~~Ps~l~~ 458 (551)
........
T Consensus 107 ~~~~~~~~ 114 (529)
T PRK07867 107 TESAHAEL 114 (529)
T ss_pred ECHhHHHH
Confidence 88766543
No 231
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=30.04 E-value=5e+02 Score=24.85 Aligned_cols=77 Identities=10% Similarity=0.150 Sum_probs=49.2
Q ss_pred cHHHHHH-HHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHh------C--CeEEecCCCC---CHHHHHHHH
Q 008848 211 TYKELRE-QVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILA------G--YVVVSIADSF---AAREIATRL 276 (551)
Q Consensus 211 TY~eL~~-~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~vva~lA~~~~------G--a~~vpl~~~~---~~~~l~~~l 276 (551)
++..+.+ -.+++.+.+.+. +.+|++|+|.+.-+.+.++.+..+... | ...+-+|... ..+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3334443 345566677776 899999999999999998776655432 2 2344455433 344456666
Q ss_pred HhcCceEEEee
Q 008848 277 RVSKAKGIFTQ 287 (551)
Q Consensus 277 ~~~~~~~vl~~ 287 (551)
+..+..+.+.+
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 77777666654
No 232
>PRK07638 acyl-CoA synthetase; Validated
Probab=29.77 E-value=4.5e+02 Score=27.52 Aligned_cols=95 Identities=9% Similarity=0.101 Sum_probs=63.7
Q ss_pred CceEEEEecCCCCCCC--ceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH-HHHHHHHHHHhCCeEEecCCC
Q 008848 191 NTVAIVWREDRCDESA--VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR-AVIIYLAIILAGYVVVSIADS 266 (551)
Q Consensus 191 d~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e-~vva~lA~~~~Ga~~vpl~~~ 266 (551)
+.+|++....| .+|. ...+|.+.+...+... .... ++++|++....+-... ++..++..+..|+..+.. +.
T Consensus 143 ~~~a~i~~TSG-tTG~PKgv~~s~~~~~~~~~~~---~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~ 217 (487)
T PRK07638 143 NAPFYMGFTSG-STGKPKAFLRAQQSWLHSFDCN---VHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RK 217 (487)
T ss_pred CCcEEEEeCCC-CCCCCcEEEEecHHHHHHHHHH---HHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CC
Confidence 44565544332 2333 2357777765544333 3344 8899999887665443 355667778889887755 56
Q ss_pred CCHHHHHHHHHhcCceEEEeecce
Q 008848 267 FAAREIATRLRVSKAKGIFTQDFI 290 (551)
Q Consensus 267 ~~~~~l~~~l~~~~~~~vl~~~~~ 290 (551)
+.++++...+++.++.++...+..
T Consensus 218 ~~~~~~~~~i~~~~~t~~~~~P~~ 241 (487)
T PRK07638 218 FIPNQVLDKLETENISVMYTVPTM 241 (487)
T ss_pred CCHHHHHHHHHHcCCeEEEeCcHH
Confidence 788899999999999999987754
No 233
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=29.35 E-value=1.2e+02 Score=30.79 Aligned_cols=63 Identities=17% Similarity=0.187 Sum_probs=42.5
Q ss_pred HHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC-----CCHHHHHHHHHhcCceEEEee
Q 008848 221 LVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (551)
Q Consensus 221 ~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~-----~~~~~l~~~l~~~~~~~vl~~ 287 (551)
.+--.|... +++||.|.+-.- -+....-|++.+|+.++.+|.+ ..++.++..+..-. ++|+..
T Consensus 52 Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 344556668 999999988643 4566778899999998888765 45788888876544 555543
No 234
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=28.61 E-value=2.2e+02 Score=29.10 Aligned_cols=64 Identities=19% Similarity=0.193 Sum_probs=48.4
Q ss_pred HHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC-----CCHHHHHHHHHhcCceEEEee
Q 008848 220 MLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (551)
Q Consensus 220 ~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~-----~~~~~l~~~l~~~~~~~vl~~ 287 (551)
..|.-.|+.+ +++||-|.+ .+.-|+...=+++..|+.+|-+|-+ ..++.++..|... .|.||.-
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 3455567777 999996544 3667888999999999998888755 4688888888775 6666654
No 235
>PRK05852 acyl-CoA synthetase; Validated
Probab=28.32 E-value=2.5e+02 Score=30.02 Aligned_cols=76 Identities=13% Similarity=-0.033 Sum_probs=55.0
Q ss_pred EecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+..... ......++.++|++...++-+... +..+++.+..|+..+.++.......+...|+..++..+..
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEF-VVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH-HHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEE
Confidence 467776654433 333456889999998876665432 2346788899999988876667778899999999998874
No 236
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=27.78 E-value=2.9e+02 Score=22.44 Aligned_cols=48 Identities=10% Similarity=0.125 Sum_probs=34.1
Q ss_pred CcccchhhHHHHHHHHh-CCEEEEecCCCChhhHHHHHHHcCCcEEEec
Q 008848 405 NLGWVMGPVILFSSFLN-GATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (551)
Q Consensus 405 ~~~~~~~~~~~~~~l~~-G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~~ 452 (551)
...|..|+..+...|-. |..+.+++.....+++.+.++++++.++..+
T Consensus 10 ~~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS 58 (121)
T PF02310_consen 10 GEVHPLGLLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGIS 58 (121)
T ss_dssp TSSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEE
T ss_pred CcchhHHHHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 33456666655555554 8888888765567889999999999987764
No 237
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=27.32 E-value=3.8e+02 Score=31.88 Aligned_cols=99 Identities=8% Similarity=-0.032 Sum_probs=68.8
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhhhhc--CCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
..|+.+|.+.. +| -.+|.+.+...+......+ .+.++|++....+-+...- ..+++++..|+..+.++.
T Consensus 627 ~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 627 RNWSRLAVADS-TG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGA-LANLALLLAGKVPVNLNY 697 (1146)
T ss_pred hcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHH-HHHHHHHHcCCEEEEeCC
Confidence 35677777632 12 1477777655443332221 3678999988877765533 336788999998887776
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHHHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l~~l~ 460 (551)
...++++...+++.+++.+...+.....+.
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 666788999999999999998887776654
No 238
>PRK06060 acyl-CoA synthetase; Validated
Probab=27.27 E-value=2.8e+02 Score=31.08 Aligned_cols=92 Identities=13% Similarity=-0.048 Sum_probs=63.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHH---HhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.|+.+|++. + . .+|++.+...+. ......++.+++++..+++-+...- ..+++++..|+..+.++.
T Consensus 19 ~pd~~a~~~---~-----~--~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~-~~~la~~~aG~~~vpi~p 87 (705)
T PRK06060 19 WYDRPAFYA---A-----D--VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLV-QLLLACLARGVMAFLANP 87 (705)
T ss_pred CCCceEEEe---c-----C--ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEecCC
Confidence 357777652 2 1 378887755443 3334568899999988877765543 336788899998887775
Q ss_pred CCChhhHHHHHHHcCCcEEEecHHHH
Q 008848 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (551)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~Ps~l 456 (551)
......+...+++.++.++.......
T Consensus 88 ~~~~~~l~~~l~~~~~~~vi~~~~~~ 113 (705)
T PRK06060 88 ELHRDDHALAARNTEPALVVTSDALR 113 (705)
T ss_pred CCCHHHHHHHHhcCCCcEEEEchHHh
Confidence 55667788888888988887755443
No 239
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=27.19 E-value=3.2e+02 Score=28.68 Aligned_cols=61 Identities=16% Similarity=0.186 Sum_probs=41.3
Q ss_pred HHhhcCCCCEEEEEcCCCHHHHHHHH--HHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 226 LDTMFSKGDAIAIDMPMTVRAVIIYL--AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 226 L~~~v~~gd~V~i~~~~~~e~vva~l--A~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
|...+++||.|.+.. ++...-..++ .+.+.|+.+..+|....++.++..++. +.++|+...
T Consensus 93 l~all~~GD~VI~~~-~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~ 155 (432)
T PRK06702 93 VLNICSSGDHLLCSS-TVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAES 155 (432)
T ss_pred HHHhcCCCCEEEECC-CchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEc
Confidence 333378999886644 4443222322 357889999999987778889888865 677887654
No 240
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=26.88 E-value=3.5e+02 Score=26.25 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=50.6
Q ss_pred EecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCC----CHHHHHHHHHhcCceEE
Q 008848 209 LMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF----AAREIATRLRVSKAKGI 284 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~----~~~~l~~~l~~~~~~~v 284 (551)
.+-++-+ -|+-.||..|++ .|-.|..++.+....+.. .+.+.|..+..++-.. ..+++...+++.+++++
T Consensus 11 ~iG~GHv-~Rcl~LA~~l~~---~g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v 84 (279)
T TIGR03590 11 EIGLGHV-MRCLTLARALHA---QGAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDIL 84 (279)
T ss_pred cccccHH-HHHHHHHHHHHH---CCCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEE
Confidence 4444444 356788888865 466777777776555444 3367887776664322 24578889999999999
Q ss_pred Eeecc
Q 008848 285 FTQDF 289 (551)
Q Consensus 285 l~~~~ 289 (551)
|+|.-
T Consensus 85 V~D~y 89 (279)
T TIGR03590 85 IVDHY 89 (279)
T ss_pred EEcCC
Confidence 99863
No 241
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=26.74 E-value=3.2e+02 Score=30.62 Aligned_cols=88 Identities=10% Similarity=0.028 Sum_probs=62.8
Q ss_pred ceEEecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcE
Q 008848 372 KAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTV 448 (551)
Q Consensus 372 KgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~ 448 (551)
+...+|.+.+...+.. .....+++++|++...++-+...- ...++++..|+..+-+.....++++...+++.++..
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWL-ASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 3567788877554443 334568999999887776654422 336788889988887765566788888999999999
Q ss_pred EEecHHHHHHHH
Q 008848 449 LGTVPSLVKAWR 460 (551)
Q Consensus 449 l~~~Ps~l~~l~ 460 (551)
+......+..+.
T Consensus 197 lv~~~~~~~~l~ 208 (700)
T PTZ00216 197 IVCNGKNVPNLL 208 (700)
T ss_pred EEECHHHHHHHH
Confidence 988776655543
No 242
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=26.64 E-value=1.5e+02 Score=26.71 Aligned_cols=43 Identities=9% Similarity=0.193 Sum_probs=30.2
Q ss_pred EecHHHHHHHHHHHHHHHHhh-cCCC-CEEEEEcCCCHHHHHHHH
Q 008848 209 LMTYKELREQVMLVANALDTM-FSKG-DAIAIDMPMTVRAVIIYL 251 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~g-d~V~i~~~~~~e~vva~l 251 (551)
-+|..|+.+++.++|..+.+. -..| +.|.++.-++-..+++.|
T Consensus 8 l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L 52 (178)
T PRK15423 8 MIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADL 52 (178)
T ss_pred ecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHH
Confidence 589999999999999999987 5323 345555555554444444
No 243
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=26.64 E-value=2.3e+02 Score=22.41 Aligned_cols=50 Identities=14% Similarity=0.012 Sum_probs=35.0
Q ss_pred EecHHHHHHH----HHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCC
Q 008848 209 LMTYKELREQ----VMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGY 258 (551)
Q Consensus 209 ~lTY~eL~~~----a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga 258 (551)
.+.+.++.+. .+.+...+... +.+++.|.+++.++.....+...+.+.|.
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~ 91 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGY 91 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCC
Confidence 3445554332 23456667667 77899999999998887777777778885
No 244
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=26.47 E-value=2.3e+02 Score=29.91 Aligned_cols=79 Identities=11% Similarity=-0.056 Sum_probs=56.6
Q ss_pred EecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+.... ...++.+++++....+-+.... ..+++++..|+..+.++.......+...+++.++..+..
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 103 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHML-VAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIH 103 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHH-HHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEe
Confidence 578877755444333 3457888998877776665543 336788999998887776556677889999999998887
Q ss_pred cHH
Q 008848 452 VPS 454 (551)
Q Consensus 452 ~Ps 454 (551)
...
T Consensus 104 ~~~ 106 (502)
T TIGR01734 104 TAE 106 (502)
T ss_pred ccc
Confidence 654
No 245
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=25.49 E-value=4.7e+02 Score=25.56 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=46.3
Q ss_pred HHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecc
Q 008848 221 LVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 221 ~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
.+...+.+- +.+|+.| +....+-.-...-+++.+.|.-+..+-|...+......++..++++++++..
T Consensus 44 ~l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 44 MIWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 344444444 6778877 4444455555555677778988777777665455577889999999999864
No 246
>PLN02565 cysteine synthase
Probab=25.41 E-value=3.9e+02 Score=26.64 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=46.5
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecc
Q 008848 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 230 v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
+.+|....+....+---+..-+++...|.-++.+-|...+......++..+++++++++.
T Consensus 63 ~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 63 IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 678855455555566666666678889998888888888888888999999999998763
No 247
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=25.32 E-value=3.6e+02 Score=27.60 Aligned_cols=57 Identities=14% Similarity=0.099 Sum_probs=32.5
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEee
Q 008848 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (551)
Q Consensus 230 v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~ 287 (551)
+++||.|.+..+.-......+-.+.+.+.+-+........+.+...++. ++++|+..
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~ 143 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIE 143 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEE
Confidence 6788887665554443443333445555555554444456667666643 56776654
No 248
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.06 E-value=3.5e+02 Score=28.98 Aligned_cols=82 Identities=15% Similarity=-0.042 Sum_probs=57.7
Q ss_pred EecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|+..+....... ....++++++++....+-+... +..+++.+..|+..+.++.......+...+++.++..+..
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 57777775544332 2345788999987766555442 3346778889998888775556788889999999998888
Q ss_pred cHHHHH
Q 008848 452 VPSLVK 457 (551)
Q Consensus 452 ~Ps~l~ 457 (551)
.+....
T Consensus 121 ~~~~~~ 126 (542)
T PRK07786 121 EAALAP 126 (542)
T ss_pred ccchHH
Confidence 765544
No 249
>PF03790 KNOX1: KNOX1 domain ; InterPro: IPR005540 The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization [].; GO: 0003677 DNA binding, 0005634 nucleus
Probab=24.79 E-value=82 Score=21.23 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=17.1
Q ss_pred cCCCHHHHHHHHHHHHhCCe
Q 008848 240 MPMTVRAVIIYLAIILAGYV 259 (551)
Q Consensus 240 ~~~~~e~vva~lA~~~~Ga~ 259 (551)
-|.-++++.+.+.|.|.|+-
T Consensus 10 HP~Y~~Ll~Ayi~C~KVGAP 29 (45)
T PF03790_consen 10 HPLYPRLLAAYIDCQKVGAP 29 (45)
T ss_pred CCCcHHHHHHHHHHHhcCCC
Confidence 36678999999999999963
No 250
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=24.75 E-value=4.9e+02 Score=25.51 Aligned_cols=78 Identities=18% Similarity=0.189 Sum_probs=51.4
Q ss_pred ecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 210 lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
-||+. ....+.+...+.+- ..+|+.|. ....+-.-...-+++.+.|.-+..+-|...+......++..++++++++.
T Consensus 35 GS~K~-R~a~~~~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 112 (299)
T TIGR01136 35 GSVKD-RIALSMIEDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPA 112 (299)
T ss_pred CCccH-HHHHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 35553 22333444444444 67788764 55555566666667778898877777766555666788999999999876
Q ss_pred c
Q 008848 289 F 289 (551)
Q Consensus 289 ~ 289 (551)
.
T Consensus 113 ~ 113 (299)
T TIGR01136 113 E 113 (299)
T ss_pred C
Confidence 4
No 251
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=24.32 E-value=3.7e+02 Score=27.47 Aligned_cols=68 Identities=15% Similarity=0.235 Sum_probs=51.0
Q ss_pred HHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 221 LVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 221 ~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
.+...+.+- ++||....|....+---+..-+++...|.-+..+-|...+.+...+++..++++++++.
T Consensus 97 ~l~~a~~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 97 MIEDAEKKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HHHHHHHcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344444444 77885545556667777777778899999888887877777778899999999999874
No 252
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=24.04 E-value=33 Score=17.38 Aligned_cols=9 Identities=22% Similarity=0.420 Sum_probs=7.1
Q ss_pred ccccccccc
Q 008848 503 SCGGTELSS 511 (551)
Q Consensus 503 ~YG~TE~~~ 511 (551)
+||.|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 599999864
No 253
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=23.92 E-value=3.1e+02 Score=29.31 Aligned_cols=78 Identities=15% Similarity=0.056 Sum_probs=54.6
Q ss_pred EecchhhHHHH---HHhhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|...+.... .......++.+++++....+-+...- ..+++.+..|+..+.++.......+...+++.++..+..
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHP-INFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH-HHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 47777664433 33334568899999988777655433 335677888888887765556778899999999988876
Q ss_pred cH
Q 008848 452 VP 453 (551)
Q Consensus 452 ~P 453 (551)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 43
No 254
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=23.89 E-value=2e+02 Score=25.38 Aligned_cols=84 Identities=15% Similarity=0.159 Sum_probs=53.3
Q ss_pred HHHhCCEEEEecCCCChhhHHHHHHHc-CCcEEEecHHHHHHHHhcCccCCCCCCCccEEEeecCCCCh-------hhHH
Q 008848 418 SFLNGATLALYQGSPLERSFGKFVQDA-GVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNV-------DDDL 489 (551)
Q Consensus 418 ~l~~G~~lvl~~~~~~~~~~~~~i~~~-~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~i~~gGe~l~~-------~~~~ 489 (551)
.+..-+..++++.......+.+.|.+. ++|++.-...+...|.+. +..+.++.||+--+. ...+
T Consensus 15 ~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~ 86 (161)
T PF00455_consen 15 SLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALE 86 (161)
T ss_pred HhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHH
Confidence 344555556666555667788888877 888888777888887653 368889999975432 2333
Q ss_pred HHHHhccCCceecccccccc
Q 008848 490 WLSSKAWYNAIIESCGGTEL 509 (551)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~ 509 (551)
.+.......-++-.-|-++-
T Consensus 87 ~l~~~~~d~afi~~~gi~~~ 106 (161)
T PF00455_consen 87 ALRQFRFDKAFIGADGISEE 106 (161)
T ss_pred HHHhhccceEEecccEecCC
Confidence 44433333456666666653
No 255
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=23.77 E-value=7.6e+02 Score=25.32 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=25.2
Q ss_pred cCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEec
Q 008848 392 IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (551)
Q Consensus 392 ~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~ 429 (551)
+++++||-++. .|++|.+. .-..+..|++-|+++
T Consensus 69 l~ig~GDeVI~-ps~TfvAT---an~i~~~Ga~PVFvD 102 (374)
T COG0399 69 LAIGPGDEVIV-PSFTFVAT---ANAVLLVGAKPVFVD 102 (374)
T ss_pred cCCCCCCEEEe-cCCchHHH---HHHHHHcCCeEEEEe
Confidence 45889997664 56776655 345688999999997
No 256
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=23.37 E-value=3.7e+02 Score=28.37 Aligned_cols=56 Identities=14% Similarity=0.234 Sum_probs=43.7
Q ss_pred CCCCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHH
Q 008848 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIY 250 (551)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~ 250 (551)
..-+..|+...+.. ..+|+++.+.++.++..+.+.+.++....|++++...-+..+
T Consensus 370 ~~~~~~Alal~g~~-------~~~f~~iq~lA~~i~~~~~~~~~~~~Plivv~e~D~aKvLGq 425 (473)
T PF06277_consen 370 GEDQPVALALPGKP-------NPSFAEIQELAEAIAEGMAELINPDQPLIVVVEQDMAKVLGQ 425 (473)
T ss_pred CCCCcEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEECchHHHHHHH
Confidence 34567777776653 799999999999999999977888888888888776555443
No 257
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.30 E-value=2.7e+02 Score=29.98 Aligned_cols=81 Identities=12% Similarity=0.010 Sum_probs=57.2
Q ss_pred EecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+.... ...+++.+|++....+-+... +..+++++..|+..+.++......++...++..+++.+..
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 478777755544333 345788999988776665543 2346778888888777765566778899999999999887
Q ss_pred cHHHH
Q 008848 452 VPSLV 456 (551)
Q Consensus 452 ~Ps~l 456 (551)
.+...
T Consensus 128 ~~~~~ 132 (563)
T PRK06710 128 LDLVF 132 (563)
T ss_pred eccch
Confidence 76443
No 258
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=23.14 E-value=3e+02 Score=28.94 Aligned_cols=78 Identities=6% Similarity=-0.115 Sum_probs=55.3
Q ss_pred EecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|++.+...+... ....++.+++++....+-+.. .+..+++.+..|+..+.++.......+...+++.++..+..
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 47888776544333 334577889999887776654 23446788888888887765556677888899988888876
Q ss_pred cH
Q 008848 452 VP 453 (551)
Q Consensus 452 ~P 453 (551)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 53
No 259
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=22.83 E-value=3.6e+02 Score=28.02 Aligned_cols=78 Identities=6% Similarity=-0.115 Sum_probs=56.6
Q ss_pred EecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|++.+...+.... ...++.+++++....+-+...- ..+++.+..|+..+.++.....+.+...+++.++..+..
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETL-LAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALV 106 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH-HHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 478887765554433 3457889999987766655433 346788899999998876666778888999999988776
Q ss_pred cH
Q 008848 452 VP 453 (551)
Q Consensus 452 ~P 453 (551)
..
T Consensus 107 ~~ 108 (458)
T PRK09029 107 LE 108 (458)
T ss_pred cC
Confidence 43
No 260
>PRK12582 acyl-CoA synthetase; Provisional
Probab=22.81 E-value=3.2e+02 Score=30.00 Aligned_cols=95 Identities=11% Similarity=-0.028 Sum_probs=60.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.++++....+ +| ..-.+|++.+...+... ....+++++|++...++-+...- ..+++++..|+..+.++.
T Consensus 62 ~pd~~a~~~~~~~-~~--~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl~p 137 (624)
T PRK12582 62 APDRPWLAQREPG-HG--QWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHA-LMTLAAMQAGVPAAPVSP 137 (624)
T ss_pred CCCchheecccCC-CC--ceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH-HHHHHHHHcCCeEeeccC
Confidence 3456665432211 22 13467888776544433 33468899999988877554332 346788889998887764
Q ss_pred CCC-----hhhHHHHHHHcCCcEEEec
Q 008848 431 SPL-----ERSFGKFVQDAGVTVLGTV 452 (551)
Q Consensus 431 ~~~-----~~~~~~~i~~~~vt~l~~~ 452 (551)
... ..++...+++.++..++..
T Consensus 138 ~~~~~~~~~~~l~~~l~~~~~~~vi~~ 164 (624)
T PRK12582 138 AYSLMSHDHAKLKHLFDLVKPRVVFAQ 164 (624)
T ss_pred ccccccCCHHHHHHHHHhcCCcEEEec
Confidence 332 2678888888888887764
No 261
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=22.78 E-value=1.9e+02 Score=22.82 Aligned_cols=48 Identities=23% Similarity=0.198 Sum_probs=36.8
Q ss_pred cCCCCEEEEEc-CCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 008848 230 FSKGDAIAIDM-PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (551)
Q Consensus 230 v~~gd~V~i~~-~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~ 277 (551)
.++-|.|.|+= |.......+.+++...|++-.-.-+.++.+++..+++
T Consensus 43 ~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~k 91 (91)
T PF08734_consen 43 LGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIVK 91 (91)
T ss_pred cCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHhC
Confidence 46678888775 5555566688899999988878888899999887763
No 262
>PLN02356 phosphateglycerate kinase
Probab=22.54 E-value=3.8e+02 Score=27.94 Aligned_cols=58 Identities=12% Similarity=-0.016 Sum_probs=41.6
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 230 v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
+++|..|. ....+---+..-++|...|.-++.+-|...+.+...+++..++++++++.
T Consensus 101 ~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 101 LFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred cCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 44666555 34444446666777888998877777776666667899999999999854
No 263
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=22.26 E-value=4.2e+02 Score=28.00 Aligned_cols=59 Identities=10% Similarity=-0.123 Sum_probs=42.6
Q ss_pred CCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEec---CCCChhhHHHHHHHcCCcEEEecHHH
Q 008848 393 DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ---GSPLERSFGKFVQDAGVTVLGTVPSL 455 (551)
Q Consensus 393 ~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~---~~~~~~~~~~~i~~~~vt~l~~~Ps~ 455 (551)
-..+||+++.-.|.++.+- .+ .-..|..++-++ ...+++.+.+.+++++|..++++|++
T Consensus 175 l~~pGd~v~vE~PtY~~~~--~~--~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 175 LLDPGDTVLVEDPTYPGAL--QA--LEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred hCCCCCEEEEcCCCcHHHH--HH--HHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 3559999988766655321 12 234677777765 24578999999999999999999974
No 264
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=22.18 E-value=2.3e+02 Score=25.16 Aligned_cols=21 Identities=10% Similarity=0.286 Sum_probs=19.3
Q ss_pred EecHHHHHHHHHHHHHHHHhh
Q 008848 209 LMTYKELREQVMLVANALDTM 229 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~ 229 (551)
-+||.|+.+.+.++|..+.+.
T Consensus 2 lis~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 2 LIPEEQIKARIAELAKQITED 22 (166)
T ss_pred ccCHHHHHHHHHHHHHHHHHH
Confidence 379999999999999999876
No 265
>PRK06381 threonine synthase; Validated
Probab=22.04 E-value=3.4e+02 Score=26.92 Aligned_cols=57 Identities=12% Similarity=-0.063 Sum_probs=41.9
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecc
Q 008848 233 GDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 233 gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
|....+....+-.-+..-++|...|.-+..+-|...+......++..+++++++...
T Consensus 62 g~~~lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~ 118 (319)
T PRK06381 62 GYSGITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK 118 (319)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 333344556677777777788899988777666666556667899999999999864
No 266
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=21.96 E-value=3e+02 Score=29.30 Aligned_cols=79 Identities=11% Similarity=0.071 Sum_probs=55.1
Q ss_pred EecchhhHHHHHH---hhhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCcEEEe
Q 008848 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (551)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~~~~~~~i~~~~vt~l~~ 451 (551)
.+|.+.+...+.. .....++.+++++....+-+...- ..+++++..|+..+..+.....+.+...+++.++..+..
T Consensus 48 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~ 126 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFY-IVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYII 126 (527)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH-HHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEE
Confidence 5788777554433 334568899999988776655433 336677888888776554456678889999999988877
Q ss_pred cHH
Q 008848 452 VPS 454 (551)
Q Consensus 452 ~Ps 454 (551)
.+.
T Consensus 127 ~~~ 129 (527)
T TIGR02275 127 DRA 129 (527)
T ss_pred cCc
Confidence 543
No 267
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=21.92 E-value=3.4e+02 Score=29.71 Aligned_cols=95 Identities=8% Similarity=-0.073 Sum_probs=63.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecC
Q 008848 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (551)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~ 430 (551)
.++.++++.. +..| ....+|.+.+...+.... ...++.++|++...++-+...- ..+++++..|+..+.++.
T Consensus 52 ~p~~~a~~~~--~~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~Gav~vpl~~ 126 (614)
T PRK08180 52 APDRVFLAER--GADG--GWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHA-LLALAAMYAGVPYAPVSP 126 (614)
T ss_pred CCCCceeeec--cCCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH-HHHHHHHHcCCeEeeecc
Confidence 3566666542 1122 235678887765544333 3468899999988776665433 336788899999988764
Q ss_pred CCC-----hhhHHHHHHHcCCcEEEecH
Q 008848 431 SPL-----ERSFGKFVQDAGVTVLGTVP 453 (551)
Q Consensus 431 ~~~-----~~~~~~~i~~~~vt~l~~~P 453 (551)
... ..++...+++.++.++....
T Consensus 127 ~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 127 AYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred ccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 433 56788889988888887753
No 268
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=21.88 E-value=4.9e+02 Score=26.71 Aligned_cols=57 Identities=12% Similarity=0.129 Sum_probs=33.4
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEE-ecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVV-SIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 230 v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~v-pl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
+++||.|.+..+.-......+-...+.|++-+ .++ ....+.+...++. ++++|+.+.
T Consensus 88 ~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-~~d~e~l~~~l~~-~tklV~l~s 145 (386)
T PRK08045 88 LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-QGDEQALRAALAE-KPKLVLVES 145 (386)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-CCCHHHHHHhccc-CCeEEEEEC
Confidence 67899887776655444444444455565433 333 3456677776654 667777653
No 269
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=21.80 E-value=4e+02 Score=27.36 Aligned_cols=57 Identities=18% Similarity=0.255 Sum_probs=34.5
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 230 v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
+++||.|.+..+......-.+-.+.+.|+.+.-.+++ .+.++..++..+.++|+++.
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d--~~~l~~~i~~~~tklV~ie~ 145 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPS--TEDIIEAIKEGRTKLVFIET 145 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECCC--HHHHHHhcCccCceEEEEEC
Confidence 7889988776555444433332334567665555553 56677777654677777654
No 270
>PRK14057 epimerase; Provisional
Probab=21.57 E-value=4.5e+02 Score=25.25 Aligned_cols=60 Identities=7% Similarity=-0.078 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCCHHHHHHHHHHHHhCC----------eEEecCCCCCHHHHHHHHHhcCceEEEeeccee
Q 008848 232 KGDAIAIDMPMTVRAVIIYLAIILAGY----------VVVSIADSFAAREIATRLRVSKAKGIFTQDFIL 291 (551)
Q Consensus 232 ~gd~V~i~~~~~~e~vva~lA~~~~Ga----------~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~ 291 (551)
..|.|.+..+.+....-.+=-|-+.|+ +-+.++|..|.+.+.++|.+...-+|.+-....
T Consensus 98 Gad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV~PGf 167 (254)
T PRK14057 98 GAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGY 167 (254)
T ss_pred CCCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEECCCC
Confidence 458999999977655555555667775 789999999999999999999888888775443
No 271
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=21.52 E-value=3.6e+02 Score=26.77 Aligned_cols=56 Identities=9% Similarity=-0.019 Sum_probs=42.6
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeecc
Q 008848 233 GDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (551)
Q Consensus 233 gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~ 289 (551)
++.|.... .+-.-...-++|.+.|.-++.+-|...+.....+++..++++++++..
T Consensus 51 ~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 51 CVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred CCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 55555544 466666667788899988887777777777788899999999998754
No 272
>PRK09192 acyl-CoA synthetase; Validated
Probab=21.31 E-value=5.4e+02 Score=27.80 Aligned_cols=86 Identities=12% Similarity=-0.034 Sum_probs=58.6
Q ss_pred eEEecchhhHHHHHHh---hhhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCC-------hhhHHHHHH
Q 008848 373 AIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL-------ERSFGKFVQ 442 (551)
Q Consensus 373 gV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~-------~~~~~~~i~ 442 (551)
.-.+|.+.+...+... ....+++++|++..+.+-+-... ..+++++..|+..+.++.... .+++...++
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~-~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFV-EAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHH-HHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 3567888775444333 33468899999888776654322 336788899999888753221 467888999
Q ss_pred HcCCcEEEecHHHHHHH
Q 008848 443 DAGVTVLGTVPSLVKAW 459 (551)
Q Consensus 443 ~~~vt~l~~~Ps~l~~l 459 (551)
+.++..+.........+
T Consensus 126 ~~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 126 SAQPAAIITPDELLPWV 142 (579)
T ss_pred hcCCCEEEeChHHHHHH
Confidence 99999988876654433
No 273
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=21.18 E-value=1.4e+02 Score=22.99 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=27.0
Q ss_pred ceEEEEecCCCCCCCceEecHHHHHH-HHHHHHHHHHhhcCCCCEEEEEcCCC
Q 008848 192 TVAIVWREDRCDESAVNLMTYKELRE-QVMLVANALDTMFSKGDAIAIDMPMT 243 (551)
Q Consensus 192 ~~Al~~~~~~~~~~~~~~lTY~eL~~-~a~~lA~~L~~~v~~gd~V~i~~~~~ 243 (551)
-+|+++++. ..|-.-+++=.|+.+ +.++++..|.++ |-.|-+--.+|
T Consensus 15 ~I~vi~e~k--IqGItfslDg~efl~eri~~L~~~L~kR---gv~v~L~~~~S 62 (86)
T PF09153_consen 15 WIAVIFEEK--IQGITFSLDGEEFLRERISRLIEFLKKR---GVSVSLDEEPS 62 (86)
T ss_dssp EEEEEESSS--EEEEEEESSHHHHHH-HHHHHHHHHHHT---T------B---
T ss_pred EEEEEEcCc--eeeEEEEeccHHHHHHHHHHHHHHHHhc---CceeEEeecCC
Confidence 467777765 233344566678877 999999999986 33454544443
No 274
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=20.99 E-value=87 Score=24.18 Aligned_cols=19 Identities=21% Similarity=0.100 Sum_probs=16.6
Q ss_pred ccCCCCCCceEEEECCCCC
Q 008848 526 AFSTATMTAGLVILDECGV 544 (551)
Q Consensus 526 ~iG~p~~g~~v~IlD~~g~ 544 (551)
.-|.|+++.-+++||..|+
T Consensus 16 ~~G~Pv~gAyVRLLD~sgE 34 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLDSSGE 34 (85)
T ss_pred cCCcCCCCeEEEEEcCCCC
Confidence 4578999999999999886
No 275
>PLN02409 serine--glyoxylate aminotransaminase
Probab=20.83 E-value=4.9e+02 Score=26.76 Aligned_cols=74 Identities=9% Similarity=-0.086 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHH-HHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 214 ELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVII-YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 214 eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~vva-~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
++.+...++...|.+. .+.++ +.++...+-..+.+ +..+++.|--.+..++.+.......+++..+.+++....
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~-~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~ 115 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGT-PFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVES 115 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC-EEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEEC
Confidence 3344444455555544 33334 44444444444443 345556777667667777777766777777887777754
No 276
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=20.72 E-value=4.3e+02 Score=26.86 Aligned_cols=65 Identities=14% Similarity=0.063 Sum_probs=42.2
Q ss_pred HHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC-----CCCHHHHHHHHHh---cCceEEEee
Q 008848 220 MLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD-----SFAAREIATRLRV---SKAKGIFTQ 287 (551)
Q Consensus 220 ~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~-----~~~~~~l~~~l~~---~~~~~vl~~ 287 (551)
..+...+... +++||.|.+-.+.. ....-++...|+.++.++. ....+.++..++. .++++|+..
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 3444555666 88999987776543 4444567788987766543 2467888888864 356666643
No 277
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=20.69 E-value=2.3e+02 Score=25.78 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=28.8
Q ss_pred EecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHH
Q 008848 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~l 251 (551)
-+|+.|+.+++.++|..+.+. -...+. .+...++--.+++.|
T Consensus 11 lis~~~I~~~i~~lA~~I~~~~~~~~~v-ivgi~~Gg~~fa~~L 53 (189)
T PLN02238 11 LWTAEDISARVAELAAQIASDYAGKSPV-VLGVATGAFMFLADL 53 (189)
T ss_pred EcCHHHHHHHHHHHHHHHHHHcCCCCcE-EEEEccCCHHHHHHH
Confidence 689999999999999999887 434444 444444444444444
No 278
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=20.67 E-value=6e+02 Score=27.47 Aligned_cols=95 Identities=16% Similarity=-0.034 Sum_probs=66.2
Q ss_pred EEEEecCCCCCCCceEEecchhhHHHHHHh---h-hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEecCCCCh
Q 008848 359 VNILFSSGTTGEPKAIPWTQLSSIRCTAEG---W-AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE 434 (551)
Q Consensus 359 a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~~~~~~~ 434 (551)
..|+|-+-.++. -.+|.+.+....... . ...++ +|||+..++|........ ++++.-.|+-.+.+...+.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a-~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIA-LLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHH-HHHHHHcCCEEeecccCCCH
Confidence 445555444444 567777665444333 2 23557 999999999988765543 56777888877776667788
Q ss_pred hhHHHHHHHcCCcEEEecHHHHHH
Q 008848 435 RSFGKFVQDAGVTVLGTVPSLVKA 458 (551)
Q Consensus 435 ~~~~~~i~~~~vt~l~~~Ps~l~~ 458 (551)
..+..-|.+-++.++.+....++.
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred HHHHHHHHccCCCEEEEecccccc
Confidence 899999999999999877665554
No 279
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=20.52 E-value=1.1e+03 Score=25.85 Aligned_cols=100 Identities=11% Similarity=0.019 Sum_probs=61.2
Q ss_pred CCCCeEEEEec--CCCCCCCceEEecchhhHHHHHHhh---hhcCCCCCCEEEEecCcccchhhHHHHHHHHhCCEEEEe
Q 008848 354 PVDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (551)
Q Consensus 354 ~~~~~a~iiyT--SGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lvl~ 428 (551)
.++.+|++... ++..|. ...+|.+.+...+.... ... ++++|++...++-+...- ..+++++..|+..+-+
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl 109 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYL-IAFFGALYAGRIAVPL 109 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHH-HHHHHHHHcCCEEEee
Confidence 34666665432 222332 34578877655443322 223 689999888776665433 3366788889887755
Q ss_pred -cCCC--ChhhHHHHHHHcCCcEEEecHHHHH
Q 008848 429 -QGSP--LERSFGKFVQDAGVTVLGTVPSLVK 457 (551)
Q Consensus 429 -~~~~--~~~~~~~~i~~~~vt~l~~~Ps~l~ 457 (551)
+... ....+...+++.++..+........
T Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 141 (631)
T PRK07769 110 FDPAEPGHVGRLHAVLDDCTPSAILTTTDSAE 141 (631)
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEEChHHHH
Confidence 2221 1356888899999999888776544
No 280
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=20.50 E-value=1.1e+03 Score=26.06 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=72.2
Q ss_pred CCCCCceEEEEecCCCCCC-CceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHH-HHHHHhCCeEEecC
Q 008848 187 RKEDNTVAIVWREDRCDES-AVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIY-LAIILAGYVVVSIA 264 (551)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~-~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~-lA~~~~Ga~~vpl~ 264 (551)
...||.+|.+....|+.+. ...-+||+-+...+..+...+. .++++|++.-++|-+--+=-++ .++...|.+.+...
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~ 265 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK 265 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec
Confidence 5678999987665543222 2347999999999988888776 4789999999999664444333 55555555555433
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecce
Q 008848 265 DSFAAREIATRLRVSKAKGIFTQDFI 290 (551)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~vl~~~~~ 290 (551)
.....+..-+...+|.+++.-+..
T Consensus 266 --~~~~~~~~dl~~~rPt~m~~VPRv 289 (613)
T COG1022 266 --EDPRTLLEDLKEVRPTVMIGVPRV 289 (613)
T ss_pred --CCHHHHHHHHHHhCCeEEeechHH
Confidence 456778888999999999977643
No 281
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=20.50 E-value=4.2e+02 Score=27.98 Aligned_cols=55 Identities=7% Similarity=0.093 Sum_probs=43.3
Q ss_pred CCceEEEEecCCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHH
Q 008848 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYL 251 (551)
Q Consensus 190 pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~vva~l 251 (551)
-+..|+...+.. ..+|+++.+.++.++..+....+++....|++++...-+..+.
T Consensus 373 ~~~~alal~g~~-------~~~y~~iq~la~~i~~~~~~~~~~~~Pliiv~e~D~aK~LGq~ 427 (475)
T PRK10719 373 TDAYALALPGSL-------PPSYAAIQTLAKALVDGVARFPNKPHPLIVVAEQDMGKALGQL 427 (475)
T ss_pred cCcEEEEcCCCC-------CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEcccHHHHHHHH
Confidence 466777776653 8999999999999999998886778888888888776655543
No 282
>PRK05939 hypothetical protein; Provisional
Probab=20.30 E-value=4.2e+02 Score=27.31 Aligned_cols=63 Identities=13% Similarity=0.227 Sum_probs=38.3
Q ss_pred HHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 008848 224 NALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (551)
Q Consensus 224 ~~L~~~v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 288 (551)
..|...+++||.|.+.-+--......+-.+.+.|+.+..++.. ..+.++..+. .+.++|++..
T Consensus 77 ~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~-~~tklV~ves 139 (397)
T PRK05939 77 AVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIR-PNTRMVFVET 139 (397)
T ss_pred HHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCC-CCCeEEEEEC
Confidence 3343337899998775432222222233456789888877764 5677777774 3677777653
No 283
>PLN03013 cysteine synthase
Probab=20.15 E-value=5.5e+02 Score=26.86 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=53.9
Q ss_pred EecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCceEEEee
Q 008848 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (551)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~vva~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vl~~ 287 (551)
+-|+++= -..+.+.....+- +++|....|....+---+..-+++...|.-++.+-|...+.+...+++..++++++++
T Consensus 150 tGSfKdR-~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~ 228 (429)
T PLN03013 150 CCSVKDR-IGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228 (429)
T ss_pred ccccHHH-HHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 3455541 2223333344444 6788555566666666666677778899877777777777777888999999999997
Q ss_pred cc
Q 008848 288 DF 289 (551)
Q Consensus 288 ~~ 289 (551)
..
T Consensus 229 ~~ 230 (429)
T PLN03013 229 PA 230 (429)
T ss_pred CC
Confidence 64
Done!