Query 008850
Match_columns 551
No_of_seqs 539 out of 3759
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 13:11:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008850.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008850hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 100.0 2E-68 6.8E-73 567.2 37.2 419 99-535 40-495 (542)
2 3ic9_A Dihydrolipoamide dehydr 100.0 5.8E-64 2E-68 532.7 41.8 421 101-535 8-437 (492)
3 3urh_A Dihydrolipoyl dehydroge 100.0 3.2E-63 1.1E-67 527.9 46.5 422 99-535 23-455 (491)
4 3lad_A Dihydrolipoamide dehydr 100.0 4.6E-63 1.6E-67 525.0 45.4 417 101-534 3-434 (476)
5 4dna_A Probable glutathione re 100.0 1.1E-62 3.8E-67 519.9 44.5 412 100-535 4-424 (463)
6 3dk9_A Grase, GR, glutathione 100.0 1.6E-62 5.4E-67 521.0 44.7 422 98-535 17-452 (478)
7 2wpf_A Trypanothione reductase 100.0 1.7E-62 5.8E-67 521.5 43.8 415 98-535 4-449 (495)
8 1ojt_A Surface protein; redox- 100.0 4.4E-62 1.5E-66 517.7 45.1 419 99-535 4-441 (482)
9 3o0h_A Glutathione reductase; 100.0 3.3E-62 1.1E-66 518.9 43.7 413 100-535 25-444 (484)
10 2eq6_A Pyruvate dehydrogenase 100.0 1.1E-61 3.7E-66 512.0 44.8 410 101-534 6-424 (464)
11 2qae_A Lipoamide, dihydrolipoy 100.0 1.4E-61 4.7E-66 512.5 44.1 418 101-534 2-431 (468)
12 1fec_A Trypanothione reductase 100.0 1.8E-61 6.2E-66 513.3 44.6 412 101-535 3-445 (490)
13 1ges_A Glutathione reductase; 100.0 6.4E-62 2.2E-66 511.8 40.7 413 100-534 3-423 (450)
14 1ebd_A E3BD, dihydrolipoamide 100.0 3.9E-61 1.3E-65 507.1 46.7 416 101-535 3-425 (455)
15 1zmd_A Dihydrolipoyl dehydroge 100.0 1.7E-61 6E-66 512.5 44.0 421 100-534 5-436 (474)
16 2r9z_A Glutathione amide reduc 100.0 2.8E-61 9.4E-66 508.5 42.3 412 100-534 3-421 (463)
17 1dxl_A Dihydrolipoamide dehydr 100.0 8.3E-61 2.8E-65 507.0 45.3 420 100-534 5-433 (470)
18 1xdi_A RV3303C-LPDA; reductase 100.0 8.9E-61 3E-65 509.9 44.0 413 101-534 2-434 (499)
19 2a8x_A Dihydrolipoyl dehydroge 100.0 4.9E-61 1.7E-65 507.7 41.4 414 101-534 3-427 (464)
20 3qfa_A Thioredoxin reductase 1 100.0 2.2E-60 7.4E-65 508.3 45.7 424 97-535 28-477 (519)
21 3l8k_A Dihydrolipoyl dehydroge 100.0 8.2E-61 2.8E-65 505.8 41.6 405 100-534 3-427 (466)
22 1v59_A Dihydrolipoamide dehydr 100.0 1.7E-60 5.9E-65 505.5 43.7 421 100-535 4-442 (478)
23 1onf_A GR, grase, glutathione 100.0 2.5E-60 8.4E-65 506.1 44.8 410 101-534 2-469 (500)
24 1lvl_A Dihydrolipoamide dehydr 100.0 2.6E-60 8.8E-65 500.7 43.1 413 100-534 4-421 (458)
25 2hqm_A GR, grase, glutathione 100.0 6.2E-60 2.1E-64 500.6 44.0 413 100-534 10-444 (479)
26 3dgh_A TRXR-1, thioredoxin red 100.0 9.2E-60 3.1E-64 500.2 44.2 421 100-535 8-449 (483)
27 3dgz_A Thioredoxin reductase 2 100.0 9.5E-60 3.2E-64 500.6 43.2 420 100-535 5-449 (488)
28 2yqu_A 2-oxoglutarate dehydrog 100.0 1.5E-59 5.3E-64 495.0 41.6 411 102-534 2-418 (455)
29 1zk7_A HGII, reductase, mercur 100.0 3.2E-59 1.1E-63 494.1 43.7 412 100-534 3-425 (467)
30 1mo9_A ORF3; nucleotide bindin 100.0 7.2E-59 2.5E-63 497.2 37.1 405 99-534 41-485 (523)
31 2x8g_A Thioredoxin glutathione 100.0 1.2E-54 4E-59 472.8 44.0 416 100-534 106-555 (598)
32 4eqs_A Coenzyme A disulfide re 100.0 2.3E-52 7.9E-57 436.7 26.9 369 103-533 2-401 (437)
33 3oc4_A Oxidoreductase, pyridin 100.0 8.5E-51 2.9E-55 427.7 34.9 369 102-534 3-404 (452)
34 3kd9_A Coenzyme A disulfide re 100.0 4.5E-50 1.5E-54 422.0 36.5 372 101-534 3-406 (449)
35 3iwa_A FAD-dependent pyridine 100.0 1E-48 3.5E-53 414.3 33.2 378 102-533 4-422 (472)
36 2cdu_A NADPH oxidase; flavoenz 100.0 1.3E-48 4.3E-53 411.3 31.8 374 102-535 1-410 (452)
37 2bc0_A NADH oxidase; flavoprot 100.0 2.9E-48 1E-52 412.3 33.6 372 101-534 35-454 (490)
38 3ics_A Coenzyme A-disulfide re 100.0 3.2E-48 1.1E-52 421.6 31.9 376 100-534 35-446 (588)
39 3ntd_A FAD-dependent pyridine 100.0 5.9E-48 2E-52 418.0 31.7 372 102-533 2-429 (565)
40 3cgb_A Pyridine nucleotide-dis 100.0 2.6E-47 8.9E-52 403.9 34.6 372 102-535 37-446 (480)
41 1nhp_A NADH peroxidase; oxidor 100.0 1.5E-47 5.3E-52 402.5 32.3 372 102-534 1-408 (447)
42 2v3a_A Rubredoxin reductase; a 100.0 5.7E-45 1.9E-49 375.4 26.2 354 101-532 4-378 (384)
43 1xhc_A NADH oxidase /nitrite r 100.0 6.1E-45 2.1E-49 372.1 19.6 331 102-525 9-355 (367)
44 4gcm_A TRXR, thioredoxin reduc 100.0 3.9E-41 1.3E-45 337.0 31.5 288 100-436 5-302 (312)
45 3klj_A NAD(FAD)-dependent dehy 100.0 3.7E-42 1.3E-46 353.2 23.9 335 101-526 9-360 (385)
46 2gqw_A Ferredoxin reductase; f 100.0 1.6E-39 5.6E-44 336.9 29.6 342 100-525 6-374 (408)
47 1q1r_A Putidaredoxin reductase 100.0 9.1E-40 3.1E-44 341.1 27.1 353 101-532 4-390 (431)
48 3lxd_A FAD-dependent pyridine 100.0 2.6E-39 8.9E-44 336.6 30.2 346 100-524 8-384 (415)
49 4a5l_A Thioredoxin reductase; 100.0 1.1E-38 3.9E-43 319.1 30.7 292 99-436 2-308 (314)
50 3ef6_A Toluene 1,2-dioxygenase 100.0 7.3E-40 2.5E-44 339.9 21.7 343 102-524 3-372 (410)
51 3fg2_P Putative rubredoxin red 100.0 1E-38 3.4E-43 330.9 29.8 344 102-524 2-373 (404)
52 2q7v_A Thioredoxin reductase; 100.0 1.9E-36 6.6E-41 304.6 31.0 289 99-437 6-309 (325)
53 3f8d_A Thioredoxin reductase ( 100.0 1.3E-36 4.5E-41 305.1 28.1 286 100-436 14-313 (323)
54 3r9u_A Thioredoxin reductase; 100.0 3.1E-36 1.1E-40 301.3 28.1 288 100-436 3-308 (315)
55 2q0l_A TRXR, thioredoxin reduc 100.0 1E-35 3.6E-40 297.2 30.3 287 102-437 2-306 (311)
56 1trb_A Thioredoxin reductase; 100.0 1.5E-35 5.3E-40 297.2 29.6 290 100-436 4-310 (320)
57 4fk1_A Putative thioredoxin re 100.0 2.5E-36 8.5E-41 300.9 23.5 277 99-436 4-296 (304)
58 1fl2_A Alkyl hydroperoxide red 100.0 2.1E-35 7.1E-40 294.9 30.2 284 102-437 2-302 (310)
59 3cty_A Thioredoxin reductase; 100.0 2.8E-35 9.7E-40 295.3 29.4 287 98-436 13-312 (319)
60 2zbw_A Thioredoxin reductase; 100.0 3.1E-35 1E-39 297.0 27.6 292 100-437 4-314 (335)
61 2a87_A TRXR, TR, thioredoxin r 100.0 4.8E-35 1.7E-39 295.7 28.8 288 99-436 12-312 (335)
62 3fbs_A Oxidoreductase; structu 100.0 1.1E-35 3.7E-40 294.8 22.1 273 101-436 2-288 (297)
63 3ab1_A Ferredoxin--NADP reduct 100.0 1E-34 3.4E-39 296.4 27.3 291 100-437 13-325 (360)
64 3itj_A Thioredoxin reductase 1 100.0 2.8E-34 9.5E-39 290.1 27.9 290 97-436 18-331 (338)
65 3lzw_A Ferredoxin--NADP reduct 100.0 3.7E-34 1.3E-38 288.4 27.2 287 101-437 7-312 (332)
66 1m6i_A Programmed cell death p 100.0 7.6E-35 2.6E-39 308.8 23.0 317 100-449 10-361 (493)
67 1vdc_A NTR, NADPH dependent th 100.0 5.4E-34 1.9E-38 287.6 28.1 286 100-436 7-319 (333)
68 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.1E-33 3.8E-38 301.8 31.1 285 100-436 211-512 (521)
69 4g6h_A Rotenone-insensitive NA 100.0 4.9E-35 1.7E-39 310.0 17.5 293 101-437 42-398 (502)
70 4a9w_A Monooxygenase; baeyer-v 100.0 3.2E-33 1.1E-37 284.3 22.5 298 101-437 3-349 (357)
71 1gte_A Dihydropyrimidine dehyd 100.0 4.3E-34 1.5E-38 326.7 17.8 309 100-464 186-535 (1025)
72 2vdc_G Glutamate synthase [NAD 100.0 6.6E-34 2.2E-38 297.5 16.4 280 100-437 121-441 (456)
73 3d1c_A Flavin-containing putat 100.0 2E-32 6.8E-37 280.2 26.9 308 101-438 4-337 (369)
74 3sx6_A Sulfide-quinone reducta 100.0 1.1E-31 3.7E-36 280.9 22.1 286 101-436 4-340 (437)
75 1lqt_A FPRA; NADP+ derivative, 100.0 5.2E-32 1.8E-36 283.6 17.8 281 101-437 3-384 (456)
76 2xve_A Flavin-containing monoo 100.0 2.8E-30 9.7E-35 271.7 30.4 296 102-439 3-340 (464)
77 1cjc_A Protein (adrenodoxin re 100.0 4.6E-31 1.6E-35 276.7 19.7 280 101-437 6-392 (460)
78 3h8l_A NADH oxidase; membrane 100.0 5.3E-31 1.8E-35 273.5 16.7 278 102-437 2-333 (409)
79 3hyw_A Sulfide-quinone reducta 100.0 5.7E-31 2E-35 274.6 16.1 284 102-436 3-329 (430)
80 1o94_A Tmadh, trimethylamine d 100.0 8.1E-31 2.8E-35 290.1 18.1 280 99-438 387-698 (729)
81 3vrd_B FCCB subunit, flavocyto 100.0 4.8E-31 1.6E-35 273.1 14.8 279 102-436 3-320 (401)
82 2gv8_A Monooxygenase; FMO, FAD 100.0 1.1E-29 3.8E-34 266.5 25.1 299 100-438 5-360 (447)
83 3k30_A Histamine dehydrogenase 100.0 1.2E-30 4E-35 287.7 18.3 271 98-438 388-673 (690)
84 3h28_A Sulfide-quinone reducta 100.0 7.1E-31 2.4E-35 274.2 14.7 283 102-436 3-329 (430)
85 3s5w_A L-ornithine 5-monooxyge 100.0 8.3E-29 2.8E-33 261.3 28.7 317 100-436 29-445 (463)
86 2gag_A Heterotetrameric sarcos 100.0 5.2E-30 1.8E-34 291.0 19.4 280 100-437 127-441 (965)
87 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.9E-28 6.5E-33 269.4 23.2 258 99-435 371-671 (671)
88 3gwf_A Cyclohexanone monooxyge 100.0 3.7E-28 1.3E-32 259.3 20.4 190 100-309 7-219 (540)
89 3uox_A Otemo; baeyer-villiger 99.9 6.4E-26 2.2E-30 242.3 24.1 194 100-307 8-224 (545)
90 1y56_A Hypothetical protein PH 99.9 1.6E-26 5.5E-31 244.9 15.3 249 99-438 106-375 (493)
91 4ap3_A Steroid monooxygenase; 99.9 1.7E-25 5.9E-30 239.2 23.0 191 99-309 19-232 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 2.5E-25 8.5E-30 238.7 22.5 192 100-304 15-221 (542)
93 4b63_A L-ornithine N5 monooxyg 99.9 1.7E-20 5.7E-25 198.9 23.4 321 98-438 36-485 (501)
94 2e5v_A L-aspartate oxidase; ar 99.8 1.2E-21 4E-26 206.2 5.8 305 103-435 1-364 (472)
95 2ywl_A Thioredoxin reductase r 99.8 1.8E-20 6.3E-25 171.0 12.4 148 271-437 3-168 (180)
96 2gqf_A Hypothetical protein HI 99.7 2.5E-18 8.6E-23 176.8 9.1 195 100-310 3-267 (401)
97 3fpz_A Thiazole biosynthetic e 99.7 1.7E-20 5.9E-25 188.2 -8.5 245 100-436 64-321 (326)
98 3ces_A MNMG, tRNA uridine 5-ca 99.6 5E-14 1.7E-18 150.4 19.2 168 100-299 27-220 (651)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.5 5.2E-15 1.8E-19 154.0 -0.0 121 280-417 176-308 (431)
100 2zxi_A TRNA uridine 5-carboxym 99.4 1.3E-11 4.5E-16 131.2 23.6 167 101-299 27-219 (637)
101 2cul_A Glucose-inhibited divis 99.4 4.8E-13 1.7E-17 126.9 10.4 155 270-437 4-229 (232)
102 1kf6_A Fumarate reductase flav 99.2 3.6E-11 1.2E-15 129.7 12.2 34 100-133 4-39 (602)
103 1chu_A Protein (L-aspartate ox 99.2 5.9E-11 2E-15 126.5 12.5 37 100-137 7-44 (540)
104 3cp8_A TRNA uridine 5-carboxym 99.1 3.6E-10 1.2E-14 120.7 15.2 168 100-298 20-213 (641)
105 3gyx_A Adenylylsulfate reducta 99.1 2E-10 6.9E-15 124.6 12.4 35 100-134 21-61 (662)
106 3v76_A Flavoprotein; structura 99.1 3.7E-10 1.3E-14 116.3 12.3 139 98-243 24-187 (417)
107 2cul_A Glucose-inhibited divis 99.1 6E-10 2.1E-14 105.4 11.1 117 101-244 3-126 (232)
108 2ywl_A Thioredoxin reductase r 99.0 2.7E-09 9.4E-14 96.5 12.5 107 102-245 2-112 (180)
109 1rp0_A ARA6, thiazole biosynth 99.0 1.2E-09 4.2E-14 106.6 10.3 161 270-437 40-272 (284)
110 1rp0_A ARA6, thiazole biosynth 99.0 6.1E-09 2.1E-13 101.6 13.6 129 100-246 38-194 (284)
111 2i0z_A NAD(FAD)-utilizing dehy 98.9 1.2E-08 4.2E-13 106.2 14.0 137 100-243 25-191 (447)
112 3dme_A Conserved exported prot 98.9 1.5E-08 5.1E-13 102.4 13.4 46 100-145 3-51 (369)
113 3alj_A 2-methyl-3-hydroxypyrid 98.9 1.2E-08 4.2E-13 103.8 12.7 132 101-245 11-162 (379)
114 3nlc_A Uncharacterized protein 98.9 6.1E-09 2.1E-13 110.3 10.4 142 99-243 105-277 (549)
115 2bry_A NEDD9 interacting prote 98.8 1.9E-08 6.6E-13 106.1 12.3 121 100-246 91-233 (497)
116 3jsk_A Cypbp37 protein; octame 98.8 2.1E-08 7.2E-13 99.2 11.6 101 100-214 78-183 (344)
117 3nix_A Flavoprotein/dehydrogen 98.8 9.6E-09 3.3E-13 106.1 9.7 35 100-134 4-38 (421)
118 1y0p_A Fumarate reductase flav 98.8 3.2E-08 1.1E-12 106.4 13.2 53 385-437 506-566 (571)
119 1ryi_A Glycine oxidase; flavop 98.8 1.4E-08 4.7E-13 103.5 9.6 49 97-145 13-63 (382)
120 3i3l_A Alkylhalidase CMLS; fla 98.8 2.8E-08 9.5E-13 106.8 12.1 38 99-136 21-58 (591)
121 3oz2_A Digeranylgeranylglycero 98.7 1E-08 3.4E-13 104.7 6.6 38 100-137 3-41 (397)
122 3e1t_A Halogenase; flavoprotei 98.7 6.2E-08 2.1E-12 102.8 12.0 37 100-136 6-42 (512)
123 3cgv_A Geranylgeranyl reductas 98.7 6.3E-08 2.2E-12 98.9 11.5 37 101-137 4-41 (397)
124 1y56_B Sarcosine oxidase; dehy 98.7 1.9E-07 6.4E-12 95.0 14.9 38 100-137 4-41 (382)
125 3dje_A Fructosyl amine: oxygen 98.7 3.8E-08 1.3E-12 102.2 9.2 37 99-135 4-41 (438)
126 3kkj_A Amine oxidase, flavin-c 98.7 1.5E-08 5.2E-13 97.4 5.6 40 101-140 2-42 (336)
127 2gag_B Heterotetrameric sarcos 98.7 1.1E-07 3.7E-12 97.5 11.8 38 100-137 20-59 (405)
128 1qo8_A Flavocytochrome C3 fuma 98.6 1.6E-07 5.4E-12 100.8 13.4 53 385-437 501-561 (566)
129 4at0_A 3-ketosteroid-delta4-5a 98.6 2.2E-07 7.5E-12 98.4 14.3 54 384-437 447-508 (510)
130 2gmh_A Electron transfer flavo 98.6 1.2E-07 4E-12 102.1 12.0 48 99-146 33-87 (584)
131 3rp8_A Flavoprotein monooxygen 98.6 5.2E-08 1.8E-12 100.2 8.8 36 98-133 20-55 (407)
132 3ps9_A TRNA 5-methylaminomethy 98.6 9.6E-08 3.3E-12 104.8 11.4 37 100-136 271-308 (676)
133 3pvc_A TRNA 5-methylaminomethy 98.6 2.7E-07 9.2E-12 101.4 14.7 37 100-136 263-300 (689)
134 2aqj_A Tryptophan halogenase, 98.6 1.1E-07 3.6E-12 101.6 10.8 38 100-137 4-44 (538)
135 1yvv_A Amine oxidase, flavin-c 98.6 1.6E-07 5.4E-12 93.7 11.5 39 102-140 3-42 (336)
136 3nyc_A D-arginine dehydrogenas 98.6 1.7E-07 5.9E-12 95.1 11.8 36 100-136 8-44 (381)
137 2x3n_A Probable FAD-dependent 98.6 2.5E-07 8.5E-12 94.8 13.1 33 101-133 6-38 (399)
138 3fmw_A Oxygenase; mithramycin, 98.6 2.3E-07 8E-12 99.3 12.8 34 100-133 48-81 (570)
139 3ihg_A RDME; flavoenzyme, anth 98.6 2E-07 6.9E-12 99.4 12.3 34 100-133 4-37 (535)
140 2gf3_A MSOX, monomeric sarcosi 98.6 5.2E-07 1.8E-11 91.8 14.6 37 101-137 3-39 (389)
141 1k0i_A P-hydroxybenzoate hydro 98.6 4.9E-07 1.7E-11 92.4 14.2 33 101-133 2-34 (394)
142 2oln_A NIKD protein; flavoprot 98.6 2E-07 6.7E-12 95.4 11.2 36 101-136 4-39 (397)
143 2uzz_A N-methyl-L-tryptophan o 98.6 3.2E-07 1.1E-11 92.9 12.7 35 101-135 2-36 (372)
144 3atr_A Conserved archaeal prot 98.5 2.9E-07 9.8E-12 96.0 11.6 34 100-133 5-38 (453)
145 3ka7_A Oxidoreductase; structu 98.5 7.7E-07 2.6E-11 91.8 14.6 39 102-140 1-40 (425)
146 2pyx_A Tryptophan halogenase; 98.5 1.6E-07 5.4E-12 99.9 9.5 54 192-245 175-235 (526)
147 2xdo_A TETX2 protein; tetracyc 98.5 2.4E-07 8.2E-12 94.9 10.5 35 99-133 24-58 (398)
148 2qa1_A PGAE, polyketide oxygen 98.5 1.9E-07 6.5E-12 98.5 9.6 35 98-132 8-42 (500)
149 2vou_A 2,6-dihydroxypyridine h 98.5 5.6E-07 1.9E-11 92.1 12.8 34 100-133 4-37 (397)
150 3nrn_A Uncharacterized protein 98.5 1.7E-06 5.8E-11 89.2 16.2 39 103-141 2-41 (421)
151 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 2.5E-07 8.4E-12 92.7 9.6 39 102-140 2-44 (342)
152 2gjc_A Thiazole biosynthetic e 98.5 7.3E-07 2.5E-11 87.6 12.6 40 100-139 64-106 (326)
153 3c4n_A Uncharacterized protein 98.5 4.7E-07 1.6E-11 92.9 11.7 37 100-136 35-73 (405)
154 2qa2_A CABE, polyketide oxygen 98.5 8.8E-07 3E-11 93.4 13.3 34 99-132 10-43 (499)
155 3c96_A Flavin-containing monoo 98.5 7.9E-07 2.7E-11 91.4 12.6 34 100-133 3-37 (410)
156 1d4d_A Flavocytochrome C fumar 98.5 7.2E-07 2.5E-11 95.7 12.0 53 385-437 506-567 (572)
157 2e4g_A Tryptophan halogenase; 98.4 1.1E-06 3.6E-11 94.0 13.1 35 100-134 24-61 (550)
158 2bry_A NEDD9 interacting prote 98.4 3.3E-08 1.1E-12 104.3 0.9 141 231-373 37-233 (497)
159 1pj5_A N,N-dimethylglycine oxi 98.4 1.6E-06 5.5E-11 97.4 14.6 44 101-144 4-52 (830)
160 3axb_A Putative oxidoreductase 98.4 9.6E-07 3.3E-11 91.9 11.4 45 100-144 22-70 (448)
161 3g5s_A Methylenetetrahydrofola 98.4 1.2E-06 3.9E-11 87.3 10.7 47 102-148 2-55 (443)
162 2weu_A Tryptophan 5-halogenase 98.4 9E-07 3.1E-11 93.8 10.7 35 101-135 2-39 (511)
163 2bs2_A Quinol-fumarate reducta 98.4 1E-06 3.5E-11 95.7 10.6 35 100-134 4-38 (660)
164 2h88_A Succinate dehydrogenase 98.3 1.1E-06 3.6E-11 94.8 10.2 34 100-133 17-50 (621)
165 1xhc_A NADH oxidase /nitrite r 98.3 2.3E-06 7.8E-11 86.5 11.8 91 102-245 144-236 (367)
166 2wdq_A Succinate dehydrogenase 98.3 2.4E-06 8.1E-11 91.8 12.1 34 100-133 6-39 (588)
167 3da1_A Glycerol-3-phosphate de 98.3 2E-06 6.8E-11 92.0 10.9 40 100-139 17-57 (561)
168 2yqu_A 2-oxoglutarate dehydrog 98.3 3.9E-06 1.3E-10 87.5 12.5 94 102-246 168-267 (455)
169 2gqw_A Ferredoxin reductase; f 98.3 3.6E-06 1.2E-10 86.3 12.1 94 102-245 146-241 (408)
170 4gde_A UDP-galactopyranose mut 98.3 5.4E-07 1.9E-11 95.4 5.2 41 100-140 9-51 (513)
171 2qcu_A Aerobic glycerol-3-phos 98.3 8.7E-06 3E-10 85.9 14.3 36 101-136 3-38 (501)
172 2dkh_A 3-hydroxybenzoate hydro 98.3 5.6E-06 1.9E-10 90.0 13.2 34 100-133 31-65 (639)
173 2r0c_A REBC; flavin adenine di 98.2 6.5E-06 2.2E-10 87.9 12.9 37 99-135 24-61 (549)
174 4eqs_A Coenzyme A disulfide re 98.2 3.3E-06 1.1E-10 87.4 9.6 93 102-245 148-242 (437)
175 1lvl_A Dihydrolipoamide dehydr 98.2 4.5E-06 1.5E-10 87.0 10.6 94 102-246 172-271 (458)
176 1ges_A Glutathione reductase; 98.2 6.1E-06 2.1E-10 85.8 11.4 94 102-246 168-268 (450)
177 2v3a_A Rubredoxin reductase; a 98.2 6.5E-06 2.2E-10 83.7 11.3 95 101-245 145-245 (384)
178 2eq6_A Pyruvate dehydrogenase 98.2 5.2E-06 1.8E-10 86.7 10.6 94 102-246 170-274 (464)
179 1nhp_A NADH peroxidase; oxidor 98.2 8.4E-06 2.9E-10 84.7 12.0 95 101-246 149-249 (447)
180 3lzw_A Ferredoxin--NADP reduct 98.2 4.9E-06 1.7E-10 82.4 9.5 96 270-373 8-129 (332)
181 3fg2_P Putative rubredoxin red 98.2 8.1E-06 2.8E-10 83.6 11.2 94 102-245 143-243 (404)
182 3fbs_A Oxidoreductase; structu 98.2 1.6E-05 5.5E-10 77.3 12.9 98 270-373 3-115 (297)
183 2r9z_A Glutathione amide reduc 98.2 8.4E-06 2.9E-10 85.1 11.5 94 102-246 167-267 (463)
184 3f8d_A Thioredoxin reductase ( 98.2 6.5E-06 2.2E-10 81.1 10.2 96 270-373 16-128 (323)
185 3ef6_A Toluene 1,2-dioxygenase 98.1 7.2E-06 2.4E-10 84.2 10.7 94 102-245 144-243 (410)
186 1v59_A Dihydrolipoamide dehydr 98.1 8.4E-06 2.9E-10 85.5 11.3 94 102-246 184-290 (478)
187 2bcg_G Secretory pathway GDP d 98.1 2E-06 6.7E-11 89.7 6.1 43 99-141 9-52 (453)
188 1v0j_A UDP-galactopyranose mut 98.1 1.8E-06 6.2E-11 88.3 5.8 43 99-141 5-49 (399)
189 1ebd_A E3BD, dihydrolipoamide 98.1 1.2E-05 4.1E-10 83.7 12.1 94 102-246 171-273 (455)
190 4a9w_A Monooxygenase; baeyer-v 98.1 9E-06 3.1E-10 81.3 10.8 91 270-368 4-130 (357)
191 1jnr_A Adenylylsulfate reducta 98.1 1.2E-05 4.2E-10 87.3 12.4 36 100-135 21-60 (643)
192 4dgk_A Phytoene dehydrogenase; 98.1 1.2E-06 4E-11 92.6 4.2 39 102-140 2-41 (501)
193 3lxd_A FAD-dependent pyridine 98.1 1.4E-05 4.9E-10 82.0 12.2 95 101-245 152-253 (415)
194 3sx6_A Sulfide-quinone reducta 98.1 3.1E-06 1.1E-10 87.7 7.0 97 270-373 5-115 (437)
195 2b9w_A Putative aminooxidase; 98.1 2.4E-06 8.2E-11 88.1 6.1 42 100-141 5-48 (424)
196 3hdq_A UDP-galactopyranose mut 98.1 2.6E-06 9E-11 86.5 6.0 42 99-140 27-69 (397)
197 4b1b_A TRXR, thioredoxin reduc 98.1 1.1E-05 3.8E-10 85.4 11.0 94 102-246 224-322 (542)
198 3itj_A Thioredoxin reductase 1 98.1 1.1E-05 3.7E-10 80.1 10.4 101 269-373 22-145 (338)
199 1q1r_A Putidaredoxin reductase 98.1 1.5E-05 5.1E-10 82.4 11.1 94 102-245 150-252 (431)
200 2hqm_A GR, grase, glutathione 98.1 1.4E-05 4.8E-10 83.7 11.1 93 102-245 186-287 (479)
201 1s3e_A Amine oxidase [flavin-c 98.1 2.5E-06 8.6E-11 90.5 5.4 40 101-140 4-44 (520)
202 2zbw_A Thioredoxin reductase; 98.1 2E-05 6.8E-10 78.3 11.7 93 270-369 6-120 (335)
203 1onf_A GR, grase, glutathione 98.1 2.2E-05 7.4E-10 82.8 12.3 94 102-246 177-278 (500)
204 1fec_A Trypanothione reductase 98.0 1.9E-05 6.4E-10 83.1 11.6 94 102-246 188-291 (490)
205 1rsg_A FMS1 protein; FAD bindi 98.0 2.4E-06 8.3E-11 90.5 4.8 41 100-140 7-49 (516)
206 3h8l_A NADH oxidase; membrane 98.0 3.1E-06 1.1E-10 86.9 5.3 100 270-373 2-116 (409)
207 2e1m_A L-glutamate oxidase; L- 98.0 3.8E-06 1.3E-10 84.5 5.8 42 100-141 43-86 (376)
208 4fk1_A Putative thioredoxin re 98.0 2.6E-05 9E-10 76.4 11.8 97 271-373 8-120 (304)
209 2yg5_A Putrescine oxidase; oxi 98.0 2.7E-06 9.3E-11 88.5 4.9 41 100-140 4-45 (453)
210 2wpf_A Trypanothione reductase 98.0 2E-05 6.8E-10 83.0 11.4 94 102-246 192-295 (495)
211 3oc4_A Oxidoreductase, pyridin 98.0 3.2E-05 1.1E-09 80.4 12.5 94 102-246 148-247 (452)
212 2q0l_A TRXR, thioredoxin reduc 98.0 4E-05 1.4E-09 75.1 12.6 96 271-373 3-117 (311)
213 3klj_A NAD(FAD)-dependent dehy 98.0 1.3E-05 4.4E-10 81.5 9.2 96 270-373 10-119 (385)
214 1zmd_A Dihydrolipoyl dehydroge 98.0 3.2E-05 1.1E-09 80.9 12.4 95 102-246 179-285 (474)
215 3ab1_A Ferredoxin--NADP reduct 98.0 4.1E-05 1.4E-09 76.9 12.7 94 270-370 15-131 (360)
216 1mo9_A ORF3; nucleotide bindin 98.0 3.1E-05 1.1E-09 82.0 12.3 94 102-246 215-319 (523)
217 1ojt_A Surface protein; redox- 98.0 1.2E-05 4.2E-10 84.3 9.0 93 102-245 186-288 (482)
218 2gv8_A Monooxygenase; FMO, FAD 98.0 3.8E-05 1.3E-09 79.7 12.6 103 269-373 6-182 (447)
219 3i6d_A Protoporphyrinogen oxid 98.0 2.8E-06 9.7E-11 88.7 3.9 40 101-140 5-51 (470)
220 2bc0_A NADH oxidase; flavoprot 98.0 2.5E-05 8.5E-10 82.1 11.0 94 102-246 195-294 (490)
221 2jae_A L-amino acid oxidase; o 98.0 6.1E-06 2.1E-10 86.8 6.0 41 100-140 10-51 (489)
222 2ivd_A PPO, PPOX, protoporphyr 98.0 4.3E-06 1.5E-10 87.6 4.9 42 99-140 14-56 (478)
223 1i8t_A UDP-galactopyranose mut 98.0 5.3E-06 1.8E-10 83.8 5.1 40 102-141 2-42 (367)
224 1c0p_A D-amino acid oxidase; a 97.9 7.2E-06 2.4E-10 82.6 5.9 39 99-137 4-42 (363)
225 3ics_A Coenzyme A-disulfide re 97.9 3.5E-05 1.2E-09 83.0 11.6 93 102-245 188-284 (588)
226 2a8x_A Dihydrolipoyl dehydroge 97.9 4E-05 1.4E-09 79.9 11.7 94 102-246 172-274 (464)
227 2q7v_A Thioredoxin reductase; 97.9 4.4E-05 1.5E-09 75.4 11.4 97 270-373 9-126 (325)
228 3nks_A Protoporphyrinogen oxid 97.9 5.2E-06 1.8E-10 86.9 4.8 39 102-140 3-44 (477)
229 2vvm_A Monoamine oxidase N; FA 97.9 8.2E-06 2.8E-10 85.9 6.3 40 101-140 39-79 (495)
230 3hyw_A Sulfide-quinone reducta 97.9 4.3E-06 1.5E-10 86.4 3.9 95 270-371 3-110 (430)
231 1xdi_A RV3303C-LPDA; reductase 97.9 4.4E-05 1.5E-09 80.4 11.7 93 102-245 183-281 (499)
232 3h28_A Sulfide-quinone reducta 97.9 6.5E-06 2.2E-10 85.1 5.1 97 270-373 3-112 (430)
233 3ntd_A FAD-dependent pyridine 97.9 3.4E-05 1.2E-09 82.7 10.8 93 102-245 152-269 (565)
234 2qae_A Lipoamide, dihydrolipoy 97.9 5.4E-05 1.9E-09 79.0 12.1 94 102-246 175-279 (468)
235 3vrd_B FCCB subunit, flavocyto 97.9 7.9E-06 2.7E-10 83.5 5.5 97 269-373 2-111 (401)
236 3alj_A 2-methyl-3-hydroxypyrid 97.9 5.5E-05 1.9E-09 76.6 11.6 95 269-372 11-162 (379)
237 3ihm_A Styrene monooxygenase A 97.9 9.4E-06 3.2E-10 83.9 5.9 49 100-148 21-73 (430)
238 4dsg_A UDP-galactopyranose mut 97.9 9.3E-06 3.2E-10 85.2 5.9 42 100-141 8-51 (484)
239 3nlc_A Uncharacterized protein 97.9 2.8E-05 9.5E-10 82.3 9.5 96 269-371 107-278 (549)
240 3cgb_A Pyridine nucleotide-dis 97.9 3.2E-05 1.1E-09 81.0 10.0 93 101-245 186-284 (480)
241 4ap3_A Steroid monooxygenase; 97.9 5E-05 1.7E-09 80.8 11.4 97 270-373 22-164 (549)
242 3v76_A Flavoprotein; structura 97.9 2.1E-05 7.2E-10 80.7 8.2 94 269-370 27-187 (417)
243 1fl2_A Alkyl hydroperoxide red 97.9 4.7E-05 1.6E-09 74.6 10.4 96 271-373 3-118 (310)
244 3r9u_A Thioredoxin reductase; 97.9 6.2E-05 2.1E-09 73.7 11.2 97 269-373 4-121 (315)
245 3p1w_A Rabgdi protein; GDI RAB 97.9 9.9E-06 3.4E-10 84.0 5.6 45 97-141 16-61 (475)
246 2bi7_A UDP-galactopyranose mut 97.9 9.6E-06 3.3E-10 82.4 5.4 40 101-140 3-43 (384)
247 3iwa_A FAD-dependent pyridine 97.9 3.9E-05 1.4E-09 80.2 10.2 94 102-245 160-260 (472)
248 1sez_A Protoporphyrinogen oxid 97.9 8.4E-06 2.9E-10 86.1 5.1 41 100-140 12-53 (504)
249 3kd9_A Coenzyme A disulfide re 97.9 2.7E-05 9.1E-10 80.9 8.8 99 269-373 3-117 (449)
250 1dxl_A Dihydrolipoamide dehydr 97.9 4.4E-05 1.5E-09 79.8 10.2 94 102-246 178-282 (470)
251 3urh_A Dihydrolipoyl dehydroge 97.9 6.4E-05 2.2E-09 79.0 11.5 94 102-246 199-303 (491)
252 3o0h_A Glutathione reductase; 97.8 6.4E-05 2.2E-09 78.8 11.3 94 102-246 192-291 (484)
253 1d5t_A Guanine nucleotide diss 97.8 1.3E-05 4.5E-10 82.8 5.9 43 99-141 4-47 (433)
254 3lad_A Dihydrolipoamide dehydr 97.8 9.6E-05 3.3E-09 77.3 12.6 94 102-246 181-283 (476)
255 2xve_A Flavin-containing monoo 97.8 6.8E-05 2.3E-09 78.2 11.2 102 270-373 3-171 (464)
256 2cdu_A NADPH oxidase; flavoenz 97.8 4.5E-05 1.5E-09 79.3 9.8 95 102-246 150-250 (452)
257 3d1c_A Flavin-containing putat 97.8 8.8E-05 3E-09 74.6 11.7 94 270-371 5-144 (369)
258 3ic9_A Dihydrolipoamide dehydr 97.8 8.7E-05 3E-09 78.0 12.0 93 102-246 175-277 (492)
259 1m6i_A Programmed cell death p 97.8 6.2E-05 2.1E-09 79.1 10.9 94 102-245 181-284 (493)
260 3lov_A Protoporphyrinogen oxid 97.8 1.1E-05 3.8E-10 84.4 5.1 40 101-140 4-46 (475)
261 4dna_A Probable glutathione re 97.8 7.8E-05 2.7E-09 77.7 11.4 94 101-246 170-271 (463)
262 1trb_A Thioredoxin reductase; 97.8 9.6E-05 3.3E-09 72.7 11.3 96 270-373 6-119 (320)
263 4a5l_A Thioredoxin reductase; 97.8 9.4E-05 3.2E-09 72.5 10.9 96 271-373 6-124 (314)
264 2iid_A L-amino-acid oxidase; f 97.8 1.7E-05 5.7E-10 83.6 5.6 40 101-140 33-73 (498)
265 1zk7_A HGII, reductase, mercur 97.8 0.00011 3.9E-09 76.5 12.0 92 102-246 177-274 (467)
266 3gwf_A Cyclohexanone monooxyge 97.8 7.7E-05 2.6E-09 79.2 10.6 97 270-373 9-152 (540)
267 1vdc_A NTR, NADPH dependent th 97.8 4.9E-05 1.7E-09 75.3 8.5 95 270-373 9-127 (333)
268 2vou_A 2,6-dihydroxypyridine h 97.8 0.00011 3.6E-09 75.0 10.9 97 269-371 5-154 (397)
269 2x3n_A Probable FAD-dependent 97.7 0.0001 3.5E-09 75.1 10.7 96 270-372 7-168 (399)
270 3l8k_A Dihydrolipoyl dehydroge 97.7 0.00015 5E-09 75.7 11.9 97 270-373 5-147 (466)
271 3cty_A Thioredoxin reductase; 97.7 0.00017 5.7E-09 71.0 11.7 96 270-373 17-129 (319)
272 3pl8_A Pyranose 2-oxidase; sub 97.7 2E-05 6.8E-10 85.2 5.4 41 98-138 43-84 (623)
273 4gcm_A TRXR, thioredoxin reduc 97.7 8.8E-05 3E-09 72.8 9.5 95 271-373 8-119 (312)
274 3uox_A Otemo; baeyer-villiger 97.7 6.6E-05 2.3E-09 79.8 9.0 97 270-373 10-152 (545)
275 3dk9_A Grase, GR, glutathione 97.7 0.00013 4.6E-09 76.2 11.2 94 102-246 188-296 (478)
276 2gqf_A Hypothetical protein HI 97.7 0.00011 3.7E-09 75.0 10.2 94 270-371 5-169 (401)
277 2a87_A TRXR, TR, thioredoxin r 97.7 0.00013 4.5E-09 72.4 10.6 98 269-373 14-129 (335)
278 4g6h_A Rotenone-insensitive NA 97.7 0.00014 4.8E-09 76.4 11.2 91 103-244 219-333 (502)
279 3dgh_A TRXR-1, thioredoxin red 97.7 0.00018 6E-09 75.4 11.5 94 102-246 188-292 (483)
280 3qfa_A Thioredoxin reductase 1 97.7 0.00024 8.2E-09 75.1 12.6 94 102-246 211-318 (519)
281 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00018 6.1E-09 76.1 11.6 98 269-373 212-329 (521)
282 3dgz_A Thioredoxin reductase 2 97.7 0.00023 7.9E-09 74.6 12.4 94 102-246 186-290 (488)
283 4hb9_A Similarities with proba 97.7 2.8E-05 9.6E-10 79.3 4.8 31 102-132 2-32 (412)
284 2vdc_G Glutamate synthase [NAD 97.7 3.4E-05 1.1E-09 80.1 5.3 89 268-369 121-218 (456)
285 1b37_A Protein (polyamine oxid 97.6 3.5E-05 1.2E-09 80.6 5.2 40 101-140 4-45 (472)
286 1yvv_A Amine oxidase, flavin-c 97.6 0.00026 8.9E-09 70.1 11.2 34 270-303 3-36 (336)
287 3s5w_A L-ornithine 5-monooxyge 97.6 0.00018 6E-09 75.0 9.5 100 271-373 32-195 (463)
288 2x8g_A Thioredoxin glutathione 97.6 0.00039 1.3E-08 74.9 12.4 32 102-133 287-318 (598)
289 2z3y_A Lysine-specific histone 97.6 5.8E-05 2E-09 82.3 5.9 41 100-140 106-147 (662)
290 3g3e_A D-amino-acid oxidase; F 97.5 4.9E-05 1.7E-09 76.1 4.3 33 103-135 2-40 (351)
291 2rgh_A Alpha-glycerophosphate 97.5 7.5E-05 2.6E-09 79.9 5.6 35 101-135 32-66 (571)
292 1cjc_A Protein (adrenodoxin re 97.5 5.7E-05 2E-09 78.5 4.4 90 268-370 5-106 (460)
293 4gut_A Lysine-specific histone 97.5 9.4E-05 3.2E-09 81.6 6.3 39 100-138 335-374 (776)
294 2xag_A Lysine-specific histone 97.5 8.6E-05 2.9E-09 82.6 6.0 40 100-139 277-317 (852)
295 1k0i_A P-hydroxybenzoate hydro 97.5 0.0005 1.7E-08 69.8 10.9 98 271-373 4-166 (394)
296 3c4a_A Probable tryptophan hyd 97.5 6.7E-05 2.3E-09 76.0 4.4 33 103-135 2-37 (381)
297 3cp8_A TRNA uridine 5-carboxym 97.4 0.00093 3.2E-08 71.4 12.7 97 269-371 21-175 (641)
298 3k30_A Histamine dehydrogenase 97.4 0.0004 1.4E-08 76.1 10.1 94 102-245 524-626 (690)
299 2i0z_A NAD(FAD)-utilizing dehy 97.4 0.00056 1.9E-08 70.8 10.7 94 270-370 27-191 (447)
300 1w4x_A Phenylacetone monooxyge 97.3 0.00059 2E-08 72.5 10.2 97 270-372 17-158 (542)
301 3qj4_A Renalase; FAD/NAD(P)-bi 97.3 0.00063 2.2E-08 67.6 9.7 33 270-302 2-37 (342)
302 4hb9_A Similarities with proba 97.3 0.0012 4E-08 67.2 11.5 34 271-304 3-36 (412)
303 3nix_A Flavoprotein/dehydrogen 97.3 0.00095 3.2E-08 68.3 10.8 98 270-370 6-166 (421)
304 3ces_A MNMG, tRNA uridine 5-ca 97.3 0.0015 5E-08 69.9 12.4 96 270-372 29-183 (651)
305 1lqt_A FPRA; NADP+ derivative, 97.3 0.00011 3.8E-09 76.3 3.4 88 269-369 3-107 (456)
306 1pn0_A Phenol 2-monooxygenase; 97.3 0.00016 5.4E-09 78.8 4.5 32 101-132 8-44 (665)
307 2xdo_A TETX2 protein; tetracyc 97.2 0.001 3.4E-08 67.7 10.3 36 269-304 26-61 (398)
308 2zxi_A TRNA uridine 5-carboxym 97.2 0.0024 8.1E-08 68.1 13.3 96 270-372 28-182 (637)
309 3atr_A Conserved archaeal prot 97.2 0.0014 4.8E-08 67.9 11.5 101 270-372 7-164 (453)
310 1gte_A Dihydropyrimidine dehyd 97.2 0.0002 6.9E-09 81.9 5.3 93 269-372 187-290 (1025)
311 3dme_A Conserved exported prot 97.2 0.0022 7.5E-08 64.0 12.0 33 270-302 5-37 (369)
312 1y0p_A Fumarate reductase flav 97.2 0.0015 5.1E-08 69.8 11.3 35 270-304 127-161 (571)
313 3i3l_A Alkylhalidase CMLS; fla 97.2 0.0019 6.7E-08 69.1 12.0 98 269-370 23-188 (591)
314 3rp8_A Flavoprotein monooxygen 97.2 0.0015 5.3E-08 66.5 10.5 35 269-303 23-57 (407)
315 1kdg_A CDH, cellobiose dehydro 97.1 0.00026 9E-09 75.3 4.8 34 100-133 6-39 (546)
316 3ihg_A RDME; flavoenzyme, anth 97.1 0.0019 6.6E-08 68.4 11.4 97 270-370 6-183 (535)
317 1y56_B Sarcosine oxidase; dehy 97.1 0.0022 7.4E-08 64.6 11.3 32 270-301 6-37 (382)
318 1ryi_A Glycine oxidase; flavop 97.1 0.0011 3.7E-08 66.9 8.9 32 270-301 18-49 (382)
319 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.00045 1.6E-08 75.4 6.5 86 269-373 373-470 (671)
320 2uzz_A N-methyl-L-tryptophan o 97.1 0.0021 7.1E-08 64.4 10.7 32 271-302 4-35 (372)
321 1y56_A Hypothetical protein PH 97.1 0.00083 2.9E-08 70.4 7.9 98 270-373 109-222 (493)
322 1d4d_A Flavocytochrome C fumar 97.0 0.0028 9.5E-08 67.7 11.6 34 270-303 127-160 (572)
323 2gag_B Heterotetrameric sarcos 97.0 0.0016 5.4E-08 66.2 9.3 33 270-302 22-56 (405)
324 1qo8_A Flavocytochrome C3 fuma 97.0 0.0016 5.6E-08 69.5 9.7 34 270-303 122-155 (566)
325 2gf3_A MSOX, monomeric sarcosi 97.0 0.003 1E-07 63.7 11.3 33 270-302 4-36 (389)
326 2qa2_A CABE, polyketide oxygen 97.0 0.0036 1.2E-07 65.7 12.0 98 269-370 12-166 (499)
327 1ju2_A HydroxynitrIle lyase; f 97.0 0.00027 9.1E-09 75.0 3.3 33 100-133 25-57 (536)
328 3oz2_A Digeranylgeranylglycero 97.0 0.0025 8.6E-08 64.2 10.4 33 271-303 6-38 (397)
329 3t37_A Probable dehydrogenase; 97.0 0.00034 1.2E-08 74.1 4.0 33 101-133 17-50 (526)
330 2qa1_A PGAE, polyketide oxygen 97.0 0.0036 1.2E-07 65.7 11.6 97 270-370 12-165 (500)
331 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00045 1.5E-08 74.9 4.3 35 101-135 56-100 (721)
332 3fmw_A Oxygenase; mithramycin, 96.9 0.0028 9.5E-08 67.6 10.4 96 270-370 50-207 (570)
333 3ps9_A TRNA 5-methylaminomethy 96.9 0.0038 1.3E-07 68.2 11.7 33 270-302 273-305 (676)
334 3q9t_A Choline dehydrogenase a 96.9 0.00047 1.6E-08 73.5 4.3 33 100-132 5-38 (577)
335 1o94_A Tmadh, trimethylamine d 96.9 0.00045 1.5E-08 76.1 4.2 88 269-371 389-492 (729)
336 3c96_A Flavin-containing monoo 96.9 0.0033 1.1E-07 64.1 10.3 102 270-372 5-171 (410)
337 3cgv_A Geranylgeranyl reductas 96.9 0.0026 8.8E-08 64.3 9.3 97 270-370 5-162 (397)
338 3e1t_A Halogenase; flavoprotei 96.9 0.0054 1.8E-07 64.6 12.0 99 270-371 8-173 (512)
339 2gag_A Heterotetrameric sarcos 96.8 0.0041 1.4E-07 70.6 10.9 104 270-373 129-256 (965)
340 3pvc_A TRNA 5-methylaminomethy 96.7 0.0065 2.2E-07 66.5 11.6 34 269-302 264-297 (689)
341 3qvp_A Glucose oxidase; oxidor 96.7 0.00085 2.9E-08 71.5 4.2 34 100-133 18-52 (583)
342 2gjc_A Thiazole biosynthetic e 96.7 0.02 6.7E-07 56.1 13.2 162 270-436 66-321 (326)
343 2gmh_A Electron transfer flavo 96.7 0.0072 2.4E-07 64.7 10.9 101 270-371 36-218 (584)
344 1coy_A Cholesterol oxidase; ox 96.6 0.0014 4.7E-08 69.0 5.0 35 99-133 9-43 (507)
345 3jsk_A Cypbp37 protein; octame 96.6 0.013 4.4E-07 57.7 11.6 160 270-436 80-331 (344)
346 1n4w_A CHOD, cholesterol oxida 96.6 0.0014 4.6E-08 69.0 4.7 34 100-133 4-37 (504)
347 2oln_A NIKD protein; flavoprot 96.6 0.012 3.9E-07 59.6 11.3 33 270-302 5-37 (397)
348 1vg0_A RAB proteins geranylger 96.5 0.0025 8.5E-08 68.2 6.1 41 100-140 7-48 (650)
349 3nyc_A D-arginine dehydrogenas 96.5 0.0053 1.8E-07 61.5 8.3 33 269-302 9-41 (381)
350 3fim_B ARYL-alcohol oxidase; A 96.5 0.001 3.5E-08 70.7 3.0 33 101-133 2-35 (566)
351 3lk7_A UDP-N-acetylmuramoylala 96.5 0.0065 2.2E-07 62.7 8.8 129 101-297 9-143 (451)
352 4g65_A TRK system potassium up 96.4 0.0017 5.8E-08 67.2 3.9 32 102-133 4-35 (461)
353 1gpe_A Protein (glucose oxidas 96.4 0.0024 8.2E-08 68.4 5.1 34 100-133 23-57 (587)
354 2jbv_A Choline oxidase; alcoho 96.3 0.0023 7.9E-08 67.9 4.3 34 100-133 12-46 (546)
355 2aqj_A Tryptophan halogenase, 96.2 0.026 8.9E-07 59.7 12.1 34 269-302 5-41 (538)
356 4at0_A 3-ketosteroid-delta4-5a 96.2 0.025 8.5E-07 59.4 11.5 34 270-303 42-75 (510)
357 3dje_A Fructosyl amine: oxygen 96.1 0.024 8.3E-07 58.1 10.9 33 270-302 7-40 (438)
358 3kkj_A Amine oxidase, flavin-c 96.1 0.0047 1.6E-07 58.2 5.0 34 271-304 4-37 (336)
359 2r0c_A REBC; flavin adenine di 96.1 0.019 6.5E-07 60.9 10.1 34 270-303 27-60 (549)
360 3c4n_A Uncharacterized protein 96.1 0.016 5.6E-07 58.8 9.2 32 270-301 37-70 (405)
361 2qcu_A Aerobic glycerol-3-phos 96.1 0.028 9.5E-07 58.9 11.2 33 270-302 4-36 (501)
362 1pj5_A N,N-dimethylglycine oxi 96.0 0.024 8.1E-07 63.4 11.0 33 270-302 5-38 (830)
363 2x5o_A UDP-N-acetylmuramoylala 95.9 0.0063 2.1E-07 62.7 5.1 31 102-132 6-36 (439)
364 3da1_A Glycerol-3-phosphate de 95.9 0.027 9.4E-07 59.8 10.2 33 269-301 18-50 (561)
365 2dkh_A 3-hydroxybenzoate hydro 95.6 0.044 1.5E-06 59.2 10.7 33 270-302 33-66 (639)
366 2e5v_A L-aspartate oxidase; ar 95.4 0.057 2E-06 56.0 10.4 31 271-301 1-31 (472)
367 3eag_A UDP-N-acetylmuramate:L- 95.4 0.049 1.7E-06 53.5 9.2 128 102-298 5-140 (326)
368 4dgk_A Phytoene dehydrogenase; 95.4 0.01 3.4E-07 62.2 4.3 35 270-304 2-36 (501)
369 4b63_A L-ornithine N5 monooxyg 95.3 0.11 3.8E-06 54.2 12.0 102 271-374 41-218 (501)
370 3fwz_A Inner membrane protein 95.2 0.026 9E-07 47.8 5.7 33 101-133 7-39 (140)
371 1kf6_A Fumarate reductase flav 94.9 0.12 4.2E-06 55.2 11.1 32 271-302 7-40 (602)
372 3dfz_A SIRC, precorrin-2 dehyd 94.8 0.035 1.2E-06 51.0 5.8 75 267-370 29-103 (223)
373 1pn0_A Phenol 2-monooxygenase; 94.7 0.13 4.3E-06 55.8 10.8 34 270-303 9-47 (665)
374 3ihm_A Styrene monooxygenase A 94.6 0.024 8.3E-07 58.0 4.7 36 267-302 20-55 (430)
375 3llv_A Exopolyphosphatase-rela 94.6 0.036 1.2E-06 46.8 5.0 32 102-133 7-38 (141)
376 2g1u_A Hypothetical protein TM 94.5 0.043 1.5E-06 47.3 5.3 32 102-133 20-51 (155)
377 1id1_A Putative potassium chan 94.3 0.047 1.6E-06 46.9 5.2 32 102-133 4-35 (153)
378 1lss_A TRK system potassium up 94.1 0.048 1.7E-06 45.7 4.8 32 102-133 5-36 (140)
379 3nrn_A Uncharacterized protein 94.1 0.048 1.7E-06 55.5 5.5 35 270-304 1-35 (421)
380 2iid_A L-amino-acid oxidase; f 94.0 0.044 1.5E-06 57.2 5.1 39 268-306 32-70 (498)
381 3ic5_A Putative saccharopine d 94.0 0.055 1.9E-06 43.7 4.6 32 102-133 6-38 (118)
382 3ka7_A Oxidoreductase; structu 93.8 0.059 2E-06 54.8 5.4 35 270-304 1-35 (425)
383 2g1u_A Hypothetical protein TM 93.7 0.082 2.8E-06 45.5 5.5 37 267-303 17-53 (155)
384 2e1m_A L-glutamate oxidase; L- 93.5 0.077 2.6E-06 53.0 5.5 37 268-304 43-80 (376)
385 3nks_A Protoporphyrinogen oxid 93.4 0.07 2.4E-06 55.2 5.3 35 270-304 3-39 (477)
386 3c4a_A Probable tryptophan hyd 93.4 0.063 2.2E-06 53.8 4.8 35 270-304 1-37 (381)
387 3eag_A UDP-N-acetylmuramate:L- 93.2 0.086 2.9E-06 51.7 5.3 77 269-374 4-82 (326)
388 2jae_A L-amino acid oxidase; o 93.2 0.093 3.2E-06 54.5 5.9 37 269-305 11-47 (489)
389 3k7m_X 6-hydroxy-L-nicotine ox 93.2 0.077 2.6E-06 54.1 5.2 34 271-304 3-36 (431)
390 4hv4_A UDP-N-acetylmuramate--L 93.1 0.17 5.9E-06 52.6 7.8 123 102-296 23-152 (494)
391 2b9w_A Putative aminooxidase; 93.1 0.084 2.9E-06 53.7 5.3 36 269-304 6-42 (424)
392 3lk7_A UDP-N-acetylmuramoylala 93.0 0.18 6.3E-06 51.8 7.8 79 268-373 8-87 (451)
393 2hmt_A YUAA protein; RCK, KTN, 93.0 0.086 2.9E-06 44.3 4.4 32 102-133 7-38 (144)
394 1rsg_A FMS1 protein; FAD bindi 92.8 0.088 3E-06 55.2 5.0 36 270-305 9-45 (516)
395 3g5s_A Methylenetetrahydrofola 92.7 0.11 3.9E-06 51.7 5.2 33 270-302 2-34 (443)
396 4gde_A UDP-galactopyranose mut 92.6 0.084 2.9E-06 55.1 4.5 36 270-305 11-47 (513)
397 3i6d_A Protoporphyrinogen oxid 92.5 0.064 2.2E-06 55.3 3.5 35 270-304 6-46 (470)
398 1c0p_A D-amino acid oxidase; a 92.4 0.11 3.9E-06 51.4 5.1 32 270-301 7-38 (363)
399 1s3e_A Amine oxidase [flavin-c 92.4 0.11 3.6E-06 54.6 5.0 35 270-304 5-39 (520)
400 2ivd_A PPO, PPOX, protoporphyr 92.3 0.11 3.8E-06 53.7 5.0 37 269-305 16-52 (478)
401 3dfz_A SIRC, precorrin-2 dehyd 92.2 0.13 4.5E-06 47.2 4.7 33 101-133 31-63 (223)
402 2bi7_A UDP-galactopyranose mut 92.2 0.13 4.6E-06 51.6 5.2 35 270-304 4-38 (384)
403 3c85_A Putative glutathione-re 92.0 0.15 5E-06 45.2 4.8 32 102-133 40-72 (183)
404 2bcg_G Secretory pathway GDP d 92.0 0.13 4.3E-06 53.0 5.0 37 270-306 12-48 (453)
405 1sez_A Protoporphyrinogen oxid 91.9 0.15 5.2E-06 53.1 5.5 37 269-305 13-49 (504)
406 2yg5_A Putrescine oxidase; oxi 91.7 0.16 5.3E-06 52.2 5.2 35 270-304 6-40 (453)
407 1kyq_A Met8P, siroheme biosynt 91.7 0.11 3.6E-06 49.4 3.6 31 102-132 14-44 (274)
408 3fwz_A Inner membrane protein 91.5 0.2 6.8E-06 42.2 4.9 35 268-302 6-40 (140)
409 3hdq_A UDP-galactopyranose mut 91.5 0.18 6E-06 50.9 5.2 36 269-304 29-64 (397)
410 3l4b_C TRKA K+ channel protien 91.4 0.15 5E-06 46.7 4.2 31 103-133 2-32 (218)
411 2vvm_A Monoamine oxidase N; FA 91.4 0.17 5.9E-06 52.6 5.2 36 270-305 40-75 (495)
412 4dio_A NAD(P) transhydrogenase 91.3 0.16 5.6E-06 50.8 4.6 33 101-133 190-222 (405)
413 1id1_A Putative potassium chan 91.2 0.24 8.2E-06 42.3 5.1 33 269-301 3-35 (153)
414 3fpz_A Thiazole biosynthetic e 91.0 0.16 5.6E-06 49.5 4.4 36 269-304 65-102 (326)
415 3g3e_A D-amino-acid oxidase; F 91.0 0.14 4.8E-06 50.5 3.9 32 271-302 2-39 (351)
416 3llv_A Exopolyphosphatase-rela 91.0 0.2 6.8E-06 42.1 4.3 33 269-301 6-38 (141)
417 1v0j_A UDP-galactopyranose mut 90.9 0.17 5.6E-06 51.2 4.4 35 270-304 8-43 (399)
418 3lov_A Protoporphyrinogen oxid 90.8 0.19 6.4E-06 52.0 4.8 35 270-304 5-41 (475)
419 3ic5_A Putative saccharopine d 90.8 0.2 6.9E-06 40.2 4.1 33 269-301 5-38 (118)
420 1lss_A TRK system potassium up 90.7 0.25 8.5E-06 41.1 4.7 32 270-301 5-36 (140)
421 2a9f_A Putative malic enzyme ( 90.7 0.21 7.2E-06 49.6 4.7 33 101-133 188-221 (398)
422 1i8t_A UDP-galactopyranose mut 90.6 0.2 6.9E-06 49.9 4.6 34 271-304 3-36 (367)
423 2z3y_A Lysine-specific histone 90.5 0.27 9.1E-06 53.3 5.8 37 268-304 106-142 (662)
424 2xag_A Lysine-specific histone 90.5 0.3 1E-05 54.3 6.2 38 268-305 277-314 (852)
425 3p2y_A Alanine dehydrogenase/p 90.4 0.2 7E-06 49.7 4.4 33 101-133 184-216 (381)
426 2e4g_A Tryptophan halogenase; 90.3 0.24 8.2E-06 52.3 5.1 34 269-302 25-61 (550)
427 2rgh_A Alpha-glycerophosphate 90.0 0.23 7.9E-06 52.7 4.7 34 269-302 32-65 (571)
428 2weu_A Tryptophan 5-halogenase 90.0 0.18 6.3E-06 52.6 3.9 33 270-302 3-38 (511)
429 3hwr_A 2-dehydropantoate 2-red 90.0 0.57 2E-05 45.5 7.2 30 102-132 20-49 (318)
430 4e12_A Diketoreductase; oxidor 89.8 0.33 1.1E-05 46.4 5.2 32 102-133 5-36 (283)
431 1f0y_A HCDH, L-3-hydroxyacyl-C 89.8 0.32 1.1E-05 46.9 5.2 32 102-133 16-47 (302)
432 1pzg_A LDH, lactate dehydrogen 89.7 0.38 1.3E-05 47.1 5.6 32 102-133 10-42 (331)
433 2pyx_A Tryptophan halogenase; 89.6 0.26 8.9E-06 51.7 4.7 34 269-302 7-52 (526)
434 3hg7_A D-isomer specific 2-hyd 89.6 0.93 3.2E-05 44.1 8.2 36 268-303 139-174 (324)
435 1vl6_A Malate oxidoreductase; 89.4 0.31 1.1E-05 48.3 4.7 34 100-133 191-225 (388)
436 4dsg_A UDP-galactopyranose mut 89.1 0.34 1.2E-05 50.3 5.0 36 269-304 9-45 (484)
437 2hmt_A YUAA protein; RCK, KTN, 89.1 0.3 1E-05 40.8 3.9 33 269-301 6-38 (144)
438 1kyq_A Met8P, siroheme biosynt 89.0 0.27 9.3E-06 46.6 3.8 35 267-301 11-45 (274)
439 4ffl_A PYLC; amino acid, biosy 89.0 0.37 1.3E-05 47.8 5.1 31 102-132 2-32 (363)
440 1jw9_B Molybdopterin biosynthe 88.9 0.36 1.2E-05 45.2 4.6 33 102-134 32-65 (249)
441 1x13_A NAD(P) transhydrogenase 88.9 0.33 1.1E-05 48.9 4.6 31 102-132 173-203 (401)
442 3axb_A Putative oxidoreductase 88.9 0.23 7.9E-06 50.8 3.6 31 270-300 24-55 (448)
443 3i83_A 2-dehydropantoate 2-red 88.8 0.38 1.3E-05 46.8 5.0 32 102-133 3-34 (320)
444 2raf_A Putative dinucleotide-b 88.6 0.5 1.7E-05 42.8 5.3 39 265-303 15-53 (209)
445 4hv4_A UDP-N-acetylmuramate--L 88.2 0.46 1.6E-05 49.4 5.3 75 268-373 21-96 (494)
446 1jnr_A Adenylylsulfate reducta 88.2 0.38 1.3E-05 51.8 4.8 51 386-436 401-464 (643)
447 1l7d_A Nicotinamide nucleotide 88.1 0.39 1.3E-05 48.1 4.6 32 101-132 172-203 (384)
448 1bg6_A N-(1-D-carboxylethyl)-L 88.1 0.42 1.4E-05 47.2 4.8 32 102-133 5-36 (359)
449 1pjc_A Protein (L-alanine dehy 88.1 0.42 1.4E-05 47.5 4.7 32 102-133 168-199 (361)
450 2ewd_A Lactate dehydrogenase,; 87.9 0.51 1.7E-05 45.9 5.1 32 102-133 5-37 (317)
451 3ghy_A Ketopantoate reductase 87.9 0.49 1.7E-05 46.4 5.1 31 102-132 4-34 (335)
452 3p1w_A Rabgdi protein; GDI RAB 87.8 0.5 1.7E-05 48.6 5.2 37 270-306 21-57 (475)
453 3pp8_A Glyoxylate/hydroxypyruv 87.8 0.9 3.1E-05 44.0 6.7 37 268-304 138-174 (315)
454 3c85_A Putative glutathione-re 87.6 0.39 1.3E-05 42.3 3.8 34 269-302 39-73 (183)
455 3l9w_A Glutathione-regulated p 87.6 0.52 1.8E-05 47.7 5.1 32 102-133 5-36 (413)
456 3ado_A Lambda-crystallin; L-gu 87.6 0.49 1.7E-05 45.9 4.7 31 102-132 7-37 (319)
457 3ado_A Lambda-crystallin; L-gu 87.5 0.3 1E-05 47.4 3.2 35 269-303 6-40 (319)
458 3hn2_A 2-dehydropantoate 2-red 87.4 0.46 1.6E-05 46.1 4.5 32 102-133 3-34 (312)
459 4gut_A Lysine-specific histone 87.3 0.48 1.7E-05 52.1 5.0 36 269-304 336-371 (776)
460 3k96_A Glycerol-3-phosphate de 87.2 0.52 1.8E-05 46.6 4.8 33 101-133 29-61 (356)
461 1t2d_A LDH-P, L-lactate dehydr 87.2 0.62 2.1E-05 45.4 5.3 31 102-132 5-36 (322)
462 1lld_A L-lactate dehydrogenase 87.2 0.53 1.8E-05 45.7 4.8 32 102-133 8-41 (319)
463 2dpo_A L-gulonate 3-dehydrogen 87.1 0.54 1.8E-05 45.8 4.7 32 102-133 7-38 (319)
464 2ew2_A 2-dehydropantoate 2-red 87.0 0.52 1.8E-05 45.4 4.7 32 102-133 4-35 (316)
465 3hwr_A 2-dehydropantoate 2-red 86.9 0.55 1.9E-05 45.6 4.7 38 263-301 13-50 (318)
466 1d5t_A Guanine nucleotide diss 86.8 0.56 1.9E-05 47.8 5.0 36 270-305 7-42 (433)
467 3vtf_A UDP-glucose 6-dehydroge 86.7 0.61 2.1E-05 47.4 5.0 32 101-132 21-52 (444)
468 3tl2_A Malate dehydrogenase; c 86.7 0.71 2.4E-05 44.8 5.3 34 100-133 7-41 (315)
469 3qha_A Putative oxidoreductase 86.5 0.51 1.7E-05 45.3 4.2 33 101-133 15-47 (296)
470 3oj0_A Glutr, glutamyl-tRNA re 86.5 0.27 9.4E-06 41.5 2.0 32 102-133 22-53 (144)
471 2y0c_A BCEC, UDP-glucose dehyd 86.4 0.59 2E-05 48.3 4.8 32 102-133 9-40 (478)
472 1b37_A Protein (polyamine oxid 86.2 0.64 2.2E-05 47.9 5.1 37 269-305 4-41 (472)
473 3gg2_A Sugar dehydrogenase, UD 86.2 0.62 2.1E-05 47.7 4.8 32 102-133 3-34 (450)
474 1ks9_A KPA reductase;, 2-dehyd 86.1 0.69 2.4E-05 44.0 4.9 31 103-133 2-32 (291)
475 2raf_A Putative dinucleotide-b 86.1 0.75 2.6E-05 41.6 4.9 32 102-133 20-51 (209)
476 1pjq_A CYSG, siroheme synthase 86.0 0.61 2.1E-05 47.9 4.7 32 102-133 13-44 (457)
477 2eez_A Alanine dehydrogenase; 85.9 0.65 2.2E-05 46.2 4.7 32 102-133 167-198 (369)
478 3ayj_A Pro-enzyme of L-phenyla 85.8 0.4 1.4E-05 51.9 3.3 36 269-304 56-100 (721)
479 3ojo_A CAP5O; rossmann fold, c 85.7 3 0.0001 42.2 9.6 80 269-373 11-98 (431)
480 3g17_A Similar to 2-dehydropan 85.7 0.57 2E-05 44.9 4.1 32 102-133 3-34 (294)
481 3gvi_A Malate dehydrogenase; N 85.6 0.82 2.8E-05 44.5 5.2 32 101-132 7-39 (324)
482 4e12_A Diketoreductase; oxidor 85.5 0.75 2.6E-05 43.8 4.8 34 270-303 5-38 (283)
483 2vhw_A Alanine dehydrogenase; 85.3 0.72 2.5E-05 46.0 4.7 33 101-133 168-200 (377)
484 3hn7_A UDP-N-acetylmuramate-L- 85.3 1.3 4.4E-05 46.3 6.9 83 263-374 13-96 (524)
485 3pl8_A Pyranose 2-oxidase; sub 85.3 0.8 2.7E-05 49.1 5.3 35 270-304 47-81 (623)
486 3doj_A AT3G25530, dehydrogenas 85.3 0.87 3E-05 44.0 5.2 33 101-133 21-53 (310)
487 3hn7_A UDP-N-acetylmuramate-L- 84.8 1.6 5.3E-05 45.7 7.2 127 102-298 20-154 (524)
488 1y6j_A L-lactate dehydrogenase 84.8 0.82 2.8E-05 44.4 4.7 32 101-132 7-40 (318)
489 2hjr_A Malate dehydrogenase; m 84.6 0.95 3.3E-05 44.2 5.1 32 102-133 15-47 (328)
490 3oj0_A Glutr, glutamyl-tRNA re 84.6 0.38 1.3E-05 40.6 2.0 33 269-301 21-53 (144)
491 2wdq_A Succinate dehydrogenase 84.5 0.8 2.7E-05 48.7 4.9 32 271-302 9-40 (588)
492 1nyt_A Shikimate 5-dehydrogena 84.5 0.93 3.2E-05 42.9 4.9 32 102-133 120-151 (271)
493 3e8x_A Putative NAD-dependent 84.5 0.94 3.2E-05 41.5 4.8 33 101-133 21-54 (236)
494 2v6b_A L-LDH, L-lactate dehydr 84.4 0.87 3E-05 43.9 4.7 31 103-133 2-34 (304)
495 2uyy_A N-PAC protein; long-cha 84.4 1.1 3.9E-05 43.2 5.6 32 102-133 31-62 (316)
496 3d0o_A L-LDH 1, L-lactate dehy 84.3 0.85 2.9E-05 44.3 4.6 32 101-132 6-39 (317)
497 3rui_A Ubiquitin-like modifier 84.2 1 3.5E-05 43.9 5.1 34 101-134 34-68 (340)
498 3g79_A NDP-N-acetyl-D-galactos 84.1 0.94 3.2E-05 46.6 5.0 32 102-133 19-52 (478)
499 3k6j_A Protein F01G10.3, confi 84.0 1.7 5.8E-05 44.4 6.8 32 102-133 55-86 (460)
500 3phh_A Shikimate dehydrogenase 84.0 1 3.4E-05 42.5 4.8 33 101-133 118-150 (269)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2e-68 Score=567.23 Aligned_cols=419 Identities=24% Similarity=0.354 Sum_probs=351.6
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC---------CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG---------DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKAL 169 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~---------~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 169 (551)
..+|||+||||||||+.||.+++++|.+|+|||+ ..+||+|+|+||+|+|.|+..+...+.+. .....+
T Consensus 40 ~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~--~~~~~~ 117 (542)
T 4b1b_A 40 TYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFK--LDSKAY 117 (542)
T ss_dssp CSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHH--HTGGGG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHH--hhhHhc
Confidence 3469999999999999999999999999999995 34899999999999999998887665543 134568
Q ss_pred CccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe------CcceEEEeCeEEEeCCCCC
Q 008850 170 GLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF------GTDNIVTAKDIIIATGSVP 243 (551)
Q Consensus 170 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~------~~g~~i~~d~lVlAtG~~p 243 (551)
|+......++|..+.++.+..++++...+...++..+|+++.+.+.+.+.+++.+ .+++++++|++|||||++|
T Consensus 118 Gi~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P 197 (542)
T 4b1b_A 118 GWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRP 197 (542)
T ss_dssp TEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEE
T ss_pred CcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCC
Confidence 8887777889999999999999999888888899999999999999999988865 2346799999999999999
Q ss_pred CCCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCC
Q 008850 244 FVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINP 323 (551)
Q Consensus 244 ~~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~ 323 (551)
.+|+..+..+..++++++++.+++.|++++|||+|++|+|+|..|+++|.+||++.+ +++++.+|+++++.+.+.+++
T Consensus 198 ~~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~- 275 (542)
T 4b1b_A 198 HIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEE- 275 (542)
T ss_dssp CCCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTTSCHHHHHHHHHHHHH-
T ss_pred CCCCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccccchhHHHHHHHHHHh-
Confidence 999877766677899999999999999999999999999999999999999999986 578899999999999999987
Q ss_pred CceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-C-CCceeeCCCCccc
Q 008850 324 RKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-Q-RGFVPVDERMRVI 398 (551)
Q Consensus 324 ~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~-~G~i~Vd~~~~~~ 398 (551)
.||+++++..+. ..++.+.+++.++ .++.+|.|++|+|++||++.|+++..++.. . ++.|.||+++|
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~~~------~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~-- 347 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFSDK------TSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSC-- 347 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEETTS------CEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSB--
T ss_pred hcceeecceEEEEEEecCCeEEEEEcCC------CeEEEEEEEEcccccCCccccCcccceeeecccCceEecccccc--
Confidence 899999998776 4556677777654 578899999999999999999999888876 3 44468899999
Q ss_pred cCCCCCCCcEEEecCCCCC-CCcHHHHHHHHHHHHHHHcCCC-ccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCC
Q 008850 399 DANGNLVPHLYCIGDANGK-MMLAHAASAQGISVVEQVTGRD-HVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGF 476 (551)
Q Consensus 399 ~~~~t~~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~ 476 (551)
|++|||||+|||++. |++++.|.+||+++++||+|.. ...+|..+|+++|++|++++||+||+||++++.+.+
T Consensus 348 ----Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~- 422 (542)
T 4b1b_A 348 ----TNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSN- 422 (542)
T ss_dssp ----CSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTT-
T ss_pred ----ccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCc-
Confidence 899999999999965 6899999999999999999865 457899999999999999999999999998744333
Q ss_pred eEEEEEEecccchh---------------hhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 477 EVSVAKTSFKANTK---------------ALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 477 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+.++...|..... ......++||+|||+++..+++|||+|++|++|.|+|+.++..-.
T Consensus 423 -v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~ 495 (542)
T 4b1b_A 423 -VEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALR 495 (542)
T ss_dssp -EEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHH
T ss_pred -EEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 3333333322211 123356789999997544389999999999999999998876543
No 2
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=5.8e-64 Score=532.70 Aligned_cols=421 Identities=24% Similarity=0.347 Sum_probs=367.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
+|||+||||||||++||..|++.|++|+|||++.+||+|.+++|+|+|.++..+...+.+ ..+..+|++.....+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~---~~~~~~g~~~~~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGAYGTTCARVGCMPSKLLIAAADASYHA---SQTDLFGIQVDRISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHH---TCGGGGTEECSEEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCcccccChhcCHHHHHHHHHHHHH---hhhhhcCcCCCCCccCH
Confidence 589999999999999999999999999999998899999999999999999888766554 34556777755566889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCceeecc
Q 008850 181 QGVADHANNLATKIRNNLTNSMKAL-GVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITS 259 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v~~~ 259 (551)
..+.+++....+++...+...+... +++++.+.+.+.+.+.|.+.++.++.||+||||||++|..|++++..+..++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~t~ 164 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLLTN 164 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGGEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCcEEcH
Confidence 8888888887777766655555554 678899999999999999988889999999999999999988666666778999
Q ss_pred hhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE---e
Q 008850 260 DHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT---K 336 (551)
Q Consensus 260 ~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~---~ 336 (551)
++++.+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ . |+++++..+. .
T Consensus 165 ~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~-~-V~i~~~~~v~~i~~ 242 (492)
T 3ic9_A 165 DNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNE-E-FYFDAKARVISTIE 242 (492)
T ss_dssp HHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHT-T-SEEETTCEEEEEEE
T ss_pred HHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhh-C-cEEEECCEEEEEEE
Confidence 999998888999999999999999999999999999999999999999999999999999987 6 9999998877 3
Q ss_pred CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeC-CCCccccCCCCCCCcEEEecCC
Q 008850 337 DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVD-ERMRVIDANGNLVPHLYCIGDA 414 (551)
Q Consensus 337 ~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd-~~~~~~~~~~t~~~~IyA~GD~ 414 (551)
+++.+.+++.+. +++.+++++|.|++|+|++|++++++++..++.. ++|+|.|| +++| |+.|+|||+|||
T Consensus 243 ~~~~v~v~~~~~--~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~------t~~~~IyA~GD~ 314 (492)
T 3ic9_A 243 KEDAVEVIYFDK--SGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQ------TSVDHIFVAGDA 314 (492)
T ss_dssp CSSSEEEEEECT--TCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCB------CSSTTEEECGGG
T ss_pred cCCEEEEEEEeC--CCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECccccc------CCCCCEEEEEec
Confidence 445666776531 1222579999999999999999988778888887 68999999 8999 899999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHcCC--CccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhc-CCeEEEEEEecccchhh
Q 008850 415 NGKMMLAHAASAQGISVVEQVTGR--DHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKE-GFEVSVAKTSFKANTKA 491 (551)
Q Consensus 415 ~~~~~~~~~A~~~g~~aa~~i~g~--~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~-~~~~~~~~~~~~~~~~~ 491 (551)
++.+++++.|..||++||.||++. ....++..+|+++|++|+++++|+||+||+++++++ |+++++.+.+|..+.|+
T Consensus 315 ~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a 394 (492)
T 3ic9_A 315 NNTLTLLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRS 394 (492)
T ss_dssp GTSSCSHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhh
Confidence 999999999999999999999973 344678889999999999999999999999874333 37899999999999999
Q ss_pred hhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 492 LAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 492 ~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
.+.++++||+||++|++ +++|||+|++|+++.++|+.++.+..
T Consensus 395 ~~~~~~~g~~kli~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai~ 437 (492)
T 3ic9_A 395 RVMGKNKGLLNVYADRT-SGEFLGAEMFGPAAEHIGHLLAWARQ 437 (492)
T ss_dssp HHTTCCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHHH
T ss_pred hhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 99999999999999988 89999999999999999998866543
No 3
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.2e-63 Score=527.94 Aligned_cols=422 Identities=35% Similarity=0.549 Sum_probs=369.3
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
++++||+||||||||++||..|++.|++|+|||+ +.+||+|.+.+|+|++.++..+..+.... ..+..+|+......
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~--~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQ--HGLEALGVEVANPK 100 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHH--HSSGGGTEECCCCE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHH--hhHhhcCcccCCCc
Confidence 3469999999999999999999999999999998 88999999999999999988877665442 12456787777777
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc--eEEEeCeEEEeCCCCCCCCCCcc--C
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD--NIVTAKDIIIATGSVPFVPKGIE--V 251 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g--~~i~~d~lVlAtG~~p~~p~~~~--~ 251 (551)
+++..+..+.......+...+...++..+++++.+.+.+.+.+.+.+ .++ .++.||+||||||+.|..+++.. +
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~~ 180 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAF 180 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCccccc
Confidence 89999999999888888888888889999999999999888766554 344 57999999999999875444443 4
Q ss_pred CCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEec
Q 008850 252 DGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTG 331 (551)
Q Consensus 252 ~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~ 331 (551)
++..+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~-~gV~v~~~ 259 (491)
T 3urh_A 181 DEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTK-QGIDFKLG 259 (491)
T ss_dssp CSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHH-TTCEEECS
T ss_pred CCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHh-CCCEEEEC
Confidence 56678899999988889999999999999999999999999999999999999999999999999999987 89999999
Q ss_pred eEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCc
Q 008850 332 VFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPH 407 (551)
Q Consensus 332 ~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~ 407 (551)
..+. .+++.+.+++.+.. .++.+++++|.|++|+|++|+++.++++..++.. ++|+|.||+++| |+.||
T Consensus 260 ~~v~~i~~~~~~~~v~~~~~~-~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~------t~~~~ 332 (491)
T 3urh_A 260 AKVTGAVKSGDGAKVTFEPVK-GGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQ------TSIAG 332 (491)
T ss_dssp EEEEEEEEETTEEEEEEEETT-SCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCB------CSSTT
T ss_pred CeEEEEEEeCCEEEEEEEecC-CCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCC------CCCCC
Confidence 8876 44556667776521 1223689999999999999999987777788877 689999999999 89999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEeccc
Q 008850 408 LYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKA 487 (551)
Q Consensus 408 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~ 487 (551)
|||+|||++.+++++.|..||+++|+||+|+...+++..+|+++|++|+++++|+||+||+++ |+++++.+++|..
T Consensus 333 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~----g~~~~~~~~~~~~ 408 (491)
T 3urh_A 333 VYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAA----GVAYKIGKFPFTA 408 (491)
T ss_dssp EEECGGGSSSCCCHHHHHHHHHHHHHHHTTSCCCCCTTCCCEEECSSSCEEEEECCHHHHHHT----TCCEEEEEEEGGG
T ss_pred EEEEEecCCCccchhHHHHHHHHHHHHHcCCCcccCCCCCCEEEEccCCeEEEeCCHHHHHhC----CCCEEEEEEecCc
Confidence 999999999999999999999999999999887788999999999999999999999999975 9999999999999
Q ss_pred chhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 488 NTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 488 ~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+.|+.+.++++||+||++|++ +++|||+|++|+++.++|+.++.+..
T Consensus 409 ~~~~~~~~~~~g~~k~i~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai~ 455 (491)
T 3urh_A 409 NGRARAMLQTDGFVKILADKE-TDRVLGGHIIGFGAGEMIHEIAVLME 455 (491)
T ss_dssp CHHHHHTTCCCCEEEEEEETT-TCBEEEEEEESTTHHHHHHHHHHHHH
T ss_pred chhhhcCCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 999999999999999999987 89999999999999999988876543
No 4
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=4.6e-63 Score=525.01 Aligned_cols=417 Identities=34% Similarity=0.561 Sum_probs=370.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCc-------cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDV-------VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQV 173 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~-------~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 173 (551)
+|||+|||||++|+++|..|++.|++|+|||+.. +||+|.+.+|+|++.++..+..+.... ..+..+|+..
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~--~~~~~~g~~~ 80 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAH--ESFKLHGIST 80 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHH--TTSGGGTEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHH--HHHHhcCccc
Confidence 5899999999999999999999999999999965 999999999999999988776655442 2345677776
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc--eEEEeCeEEEeCCCCCCCCCCc
Q 008850 174 HAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD--NIVTAKDIIIATGSVPFVPKGI 249 (551)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g--~~i~~d~lVlAtG~~p~~p~~~ 249 (551)
....+++..+..+...+.+.+...+...++..+++++.+.+.+.+.+.+.+ .++ .++.||+||||||+.|..|++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~ 160 (476)
T 3lad_A 81 GEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPA 160 (476)
T ss_dssp SCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTS
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCC
Confidence 667789999999999888888888888888899999999988887655444 445 5799999999999999888777
Q ss_pred cCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEE
Q 008850 250 EVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYH 329 (551)
Q Consensus 250 ~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~ 329 (551)
+.++..++++.++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~Gv~v~ 239 (476)
T 3lad_A 161 PVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTK-QGLKIL 239 (476)
T ss_dssp CCCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHH-TTEEEE
T ss_pred CCCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHh-CCCEEE
Confidence 7777788999999888888999999999999999999999999999999999999999999999999999987 899999
Q ss_pred eceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCC
Q 008850 330 TGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLV 405 (551)
Q Consensus 330 ~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~ 405 (551)
++..+. .+++.+.+++.++. + .+++++|.|++|+|++|+++.+.++..++.. ++|+|.||+++| |+.
T Consensus 240 ~~~~v~~i~~~~~~~~v~~~~~~--g-~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~------t~~ 310 (476)
T 3lad_A 240 LGARVTGTEVKNKQVTVKFVDAE--G-EKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCA------TSV 310 (476)
T ss_dssp ETCEEEEEEECSSCEEEEEESSS--E-EEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSB------CSS
T ss_pred ECCEEEEEEEcCCEEEEEEEeCC--C-cEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcc------cCC
Confidence 998877 44556677776542 1 2579999999999999999977678888877 689999999999 899
Q ss_pred CcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEec
Q 008850 406 PHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSF 485 (551)
Q Consensus 406 ~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~ 485 (551)
|||||+|||++.+++++.|..||+++|+||+|+...+++..+|+++|++|+++++|+||+||+++ |+++++.+++|
T Consensus 311 ~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~----g~~~~~~~~~~ 386 (476)
T 3lad_A 311 PGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAE----GVAINVGVFPF 386 (476)
T ss_dssp TTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCCCCCCTTCCCEEECSSSEEEEEECCHHHHHHT----TCCEEEEEEEG
T ss_pred CCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCCcccCCCCCCEEEECcCCEEEeeCCHHHHHhc----CCCEEEEEEec
Confidence 99999999999999999999999999999999887788999999999999999999999999975 99999999999
Q ss_pred ccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 486 KANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 486 ~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
..+.|+.+.++++||+||++|++ +++|||+|++|+++.++|+.++..-
T Consensus 387 ~~~~~~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai 434 (476)
T 3lad_A 387 AASGRAMAANDTAGFVKVIADAK-TDRVLGVHVIGPSAAELVQQGAIAM 434 (476)
T ss_dssp GGCHHHHHHTCCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHH
T ss_pred cccchheecCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 99999999999999999999988 8999999999999999998886654
No 5
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-62 Score=519.90 Aligned_cols=412 Identities=28% Similarity=0.424 Sum_probs=367.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
.++||+|||||++|+++|..|++.|++|+|||++.+||+|.+.+|+|++.++..+.....+ ..+..+|+......++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~---~~~~~~g~~~~~~~~~ 80 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHF---EDAAGFGWTVGESRFD 80 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHH---HHGGGGTEEECCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHH---HHHHhcCcccCCCCcC
Confidence 3589999999999999999999999999999999999999999999999998887766544 3456677776667789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe-CcceEEEeCeEEEeCCCCCC-CCCCccCCCceee
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF-GTDNIVTAKDIIIATGSVPF-VPKGIEVDGKTVI 257 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~-~~g~~i~~d~lVlAtG~~p~-~p~~~~~~~~~v~ 257 (551)
+..+..+.......+...+...++..+++++.+.+.+.+.+.+.+ .++.++.||+||+|||+.|. .|++++.+ .++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~--~~~ 158 (463)
T 4dna_A 81 WAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHE--LCI 158 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGG--GCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCcc--ccc
Confidence 999999988888888888888888899999999999999889888 56788999999999999999 88766643 367
Q ss_pred cchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE--
Q 008850 258 TSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT-- 335 (551)
Q Consensus 258 ~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~-- 335 (551)
++++++.+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+.
T Consensus 159 ~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~-~Gv~i~~~~~v~~i 237 (463)
T 4dna_A 159 TSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEE-KGIRILCEDIIQSV 237 (463)
T ss_dssp CHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-TTCEEECSCCEEEE
T ss_pred cHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHH-CCCEEECCCEEEEE
Confidence 88888888888999999999999999999999999999999999999999999999999999987 899999987776
Q ss_pred -eC-CCcEEEE-EecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEe
Q 008850 336 -KD-GKPVTIE-LIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCI 411 (551)
Q Consensus 336 -~~-~~~~~v~-~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~ 411 (551)
.+ +..+.++ +.++ + +++|.|++|+|++|++++++++..++.. ++|+|.||+++| |+.|||||+
T Consensus 238 ~~~~~~~~~v~~~~~g------~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~------t~~~~iya~ 304 (463)
T 4dna_A 238 SADADGRRVATTMKHG------E-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSR------TSTPGIYAL 304 (463)
T ss_dssp EECTTSCEEEEESSSC------E-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCB------CSSTTEEEC
T ss_pred EEcCCCEEEEEEcCCC------e-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCC------CCCCCEEEE
Confidence 33 2335566 5554 4 9999999999999999987778888887 689999999999 899999999
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHHcCCCc-cCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchh
Q 008850 412 GDANGKMMLAHAASAQGISVVEQVTGRDH-VLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTK 490 (551)
Q Consensus 412 GD~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~ 490 (551)
|||++.+++++.|..||+++|+||+|... ..++..+|+++|++|+++++|+||+||+++ |+++++++.+|..+.+
T Consensus 305 GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~----~~~~~~~~~~~~~~~~ 380 (463)
T 4dna_A 305 GDVTDRVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARK----FQEIEVYRAEFRPMKA 380 (463)
T ss_dssp SGGGSSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHH----SSEEEEEEEEECCTTH
T ss_pred EecCCCCCChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHc----CCCeEEEEEeccccch
Confidence 99999999999999999999999998653 467889999999999999999999999986 8899999999999999
Q ss_pred hhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 491 ALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 491 ~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+++.++++||+||++|++ +++|||+|++|+.+.++|+.++.+-.
T Consensus 381 ~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai~ 424 (463)
T 4dna_A 381 TLSGRKEKTIMKLVVNAA-DRKVVGAHILGHDAGEMAQLLGISLR 424 (463)
T ss_dssp HHHCCCCCEEEEEEEETT-TCBEEEEEEESTTHHHHHHHHHHHHH
T ss_pred hhcCCCceEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 999999999999999988 89999999999999999999876544
No 6
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.6e-62 Score=521.00 Aligned_cols=422 Identities=27% Similarity=0.392 Sum_probs=365.2
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
++.++||+|||||++|+++|..|++.|++|+|||++.+||+|.+.+|+|++.++......+.+ .+...+|++.....
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~---~~~~~~g~~~~~~~ 93 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFM---HDHADYGFPSCEGK 93 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHH---TTTTTTTSCCCCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHH---HHHHhcCccCCCCc
Confidence 345699999999999999999999999999999999999999999999999998877665544 34556777766677
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCC--cEEEeCcceEEEeCeEEEeCCCCCCCC---CCccCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGP--QKVKFGTDNIVTAKDIIIATGSVPFVP---KGIEVD 252 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~v~~~~g~~i~~d~lVlAtG~~p~~p---~~~~~~ 252 (551)
+++..+..+.....+.+...+...++..+|+++.+++.+.+. +.+. .++.++.||+||||||+.|..| ++++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~ 172 (478)
T 3dk9_A 94 FNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS 172 (478)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc
Confidence 899999999999998888888888889999999999888765 3555 3457899999999999999988 665544
Q ss_pred CceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEece
Q 008850 253 GKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGV 332 (551)
Q Consensus 253 ~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~ 332 (551)
.++++++++.+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++.
T Consensus 173 --~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~-~gv~i~~~~ 249 (478)
T 3dk9_A 173 --LGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN-AGVEVLKFS 249 (478)
T ss_dssp --GSBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHH-TTCEEETTE
T ss_pred --eeEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHH-CCCEEEeCC
Confidence 45778888888888999999999999999999999999999999999999999999999999999987 899999998
Q ss_pred EEE---eCCCc--EEEEEecccCCCC-CeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCC
Q 008850 333 FAT---KDGKP--VTIELIDAKTKEP-KDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLV 405 (551)
Q Consensus 333 ~~~---~~~~~--~~v~~~~g~~~~~-~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~ 405 (551)
.+. .+++. +.+++.+...++. ++++++|.|++|+|++|+++.|.++..++.. ++|+|.||+++| |+.
T Consensus 250 ~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~------t~~ 323 (478)
T 3dk9_A 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQN------TNV 323 (478)
T ss_dssp EEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCB------CSS
T ss_pred EEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcc------cCC
Confidence 876 23333 5566654311110 2579999999999999999977778888887 789999999999 899
Q ss_pred CcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCC--CccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEE
Q 008850 406 PHLYCIGDANGKMMLAHAASAQGISVVEQVTGR--DHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKT 483 (551)
Q Consensus 406 ~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~--~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~ 483 (551)
|||||+|||++.+++++.|..||+++|+||+|. ....+|..+|+++|++|+++++|+||+||++++. .+++.+++.
T Consensus 324 ~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~--~~~~~~~~~ 401 (478)
T 3dk9_A 324 KGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYG--IENVKTYST 401 (478)
T ss_dssp TTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHC--GGGEEEEEE
T ss_pred CCEEEEEecCCCCccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEeeCCHHHHHhhCC--CccEEEEEe
Confidence 999999999999999999999999999999987 3456888999999999999999999999998621 256888888
Q ss_pred ecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 484 SFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+|..+.++...++++||+||++|++ +++|||+|++|+.+.++|+.++.+-.
T Consensus 402 ~~~~~~~~~~~~~~~g~~k~i~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai~ 452 (478)
T 3dk9_A 402 SFTPMYHAVTKRKTKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVK 452 (478)
T ss_dssp EECCGGGGGCSSCCCEEEEEEEETT-TTEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred ecCcchhhhhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 9999999999899999999999988 89999999999999999999976644
No 7
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.7e-62 Score=521.54 Aligned_cols=415 Identities=28% Similarity=0.437 Sum_probs=364.0
Q ss_pred CCCcccEEEECCChHHHHHHHHHHH-cCCcEEEee---------CCccCcccccCCccCChhhHhhHHHHHHHHhhhhhh
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVE-KGLKTAIIE---------GDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMK 167 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~-~g~~V~liE---------~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 167 (551)
|..++||+|||||+||+++|..|++ .|++|+||| ++.+||+|.+++|+|+|.++..+...+.+. ...
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~---~~~ 80 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLR---ESA 80 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHH---HHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHh---HHH
Confidence 3446899999999999999999999 999999999 688999999999999999988776655443 455
Q ss_pred hcCcccccc--ccCHHHHHHHHHHHHHHHHHHHHHHHHHc-CeEEEeceEEEeCCcEEEeC---c-----ceEEEeCeEE
Q 008850 168 ALGLQVHAA--GYDRQGVADHANNLATKIRNNLTNSMKAL-GVDILTGVGTILGPQKVKFG---T-----DNIVTAKDII 236 (551)
Q Consensus 168 ~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~v~~~---~-----g~~i~~d~lV 236 (551)
.+|+..... .+++..+.++.....+.+...+...+++. +|+++.+++.+++.+.|.+. + ++++.||+||
T Consensus 81 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 81 GFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHIL 160 (495)
T ss_dssp TTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEE
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEE
Confidence 677765444 68899999999988888888888888888 99999999888888888886 4 6789999999
Q ss_pred EeCCCCCCCCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhC---CCeEEEEcccCcCCCCCCHHHH
Q 008850 237 IATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTAL---GSEVTFIEALDQLMPGFDPEIG 313 (551)
Q Consensus 237 lAtG~~p~~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~~~l~~~~~~~~ 313 (551)
||||+.|+.|++++. ..+++++++..+...+++++|||+|++|+|+|..|++. |.+|+++++.+++++.+++++.
T Consensus 161 iATGs~p~~p~i~G~--~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~ 238 (495)
T 2wpf_A 161 LATGSWPQMPAIPGI--EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIR 238 (495)
T ss_dssp ECCCEEECCCCCTTG--GGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHH
T ss_pred EeCCCCcCCCCCCCc--cccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHH
Confidence 999999998876655 24678888888888899999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHhCCCceEEEeceEEE---eCC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCc
Q 008850 314 KLAQRVLINPRKIDYHTGVFAT---KDG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGF 388 (551)
Q Consensus 314 ~~~~~~l~~~~gi~~~~~~~~~---~~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~ 388 (551)
+.+.+.+++ .||+++++..+. .++ ..+.+++.+| +++++|.|++|+|++||++.|.++.+++.. ++|+
T Consensus 239 ~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~~v~~~~G------~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~ 311 (495)
T 2wpf_A 239 EEVTKQLTA-NGIEIMTNENPAKVSLNTDGSKHVTFESG------KTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGG 311 (495)
T ss_dssp HHHHHHHHH-TTCEEEESCCEEEEEECTTSCEEEEETTS------CEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSS
T ss_pred HHHHHHHHh-CCCEEEeCCEEEEEEEcCCceEEEEECCC------cEEEcCEEEECCCCcccccccchhhcCccCCCCCC
Confidence 999999987 899999998776 232 3467777665 579999999999999999866667788877 5899
Q ss_pred eeeCCCCccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCC-ccCCCCCcceEEEcCCCeeEecCCHHHH
Q 008850 389 VPVDERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRD-HVLNHLSIPAACFTHPEISMVGLTEPQA 467 (551)
Q Consensus 389 i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~~~vG~~e~~a 467 (551)
|.||+++| |+.|||||+|||++.+++++.|..||+++|+||+|.. ...+|..+|+++|++|++++||++|++|
T Consensus 312 i~Vd~~~~------t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a 385 (495)
T 2wpf_A 312 VQVDEFSR------TNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVA 385 (495)
T ss_dssp BCCCTTCB------CSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHHH
T ss_pred EEECCCCc------cCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHHH
Confidence 99999999 8999999999999988899999999999999999854 4567889999999999999999999999
Q ss_pred HhhchhcCCeEEEEEEecccchhhhhcCCCceE-EEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 468 REKAEKEGFEVSVAKTSFKANTKALAENEGEGL-AKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+++ +.++++.+.+|..+.+++..+.+++| +||++|++ +++|||+|++|+.+.++|+.++.+..
T Consensus 386 ~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai~ 449 (495)
T 2wpf_A 386 AKE----FEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHS-DGTVLGVHLLGDGAPEIIQAVGVCLR 449 (495)
T ss_dssp HHH----SSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETT-TCBEEEEEEESTTHHHHHHHHHHHHH
T ss_pred Hhc----CCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 875 67888899999999999988888999 99999987 89999999999999999998876543
No 8
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=4.4e-62 Score=517.74 Aligned_cols=419 Identities=31% Similarity=0.490 Sum_probs=363.1
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
..++||+|||||++|+++|..|++.|++|+|||+ +.+||+|.+.+|+|++.++......+.+ .++..+|++.....
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~---~~~~~~gi~~~~~~ 80 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEV---RHLAANGIKYPEPE 80 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHH---HHGGGGTCCCCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHH---HHHHhCCcccCCCc
Confidence 3468999999999999999999999999999999 8899999999999999988777666554 34555777765566
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc------------eEEEeCeEEEeCCCCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD------------NIVTAKDIIIATGSVP 243 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g------------~~i~~d~lVlAtG~~p 243 (551)
+++..+..+.......+...+...++..+++++.++..+.+.+.+.+ .++ .++.||+||+|||++|
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p 160 (482)
T 1ojt_A 81 LDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRV 160 (482)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCC
Confidence 78888888888877888777777888899999999987776666554 334 6799999999999999
Q ss_pred CCCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCC
Q 008850 244 FVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINP 323 (551)
Q Consensus 244 ~~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~ 323 (551)
..|++.+.+. .+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++
T Consensus 161 ~~~~~i~~~~-~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~- 238 (482)
T 1ojt_A 161 TKLPFIPEDP-RIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEY- 238 (482)
T ss_dssp CCCSSCCCCT-TEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGG-
T ss_pred CCCCCCCccC-cEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHh-
Confidence 8887333333 57888888888888999999999999999999999999999999999999999999999999999987
Q ss_pred CceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCcccc
Q 008850 324 RKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVID 399 (551)
Q Consensus 324 ~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~ 399 (551)
.||+++++..+. .+++...+++.+. .+.++++++|.|++|+|++||+++++++..++.. ++|+|.||+++|
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~--~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~--- 313 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDGVYVTFEGA--NAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMR--- 313 (482)
T ss_dssp GEEEEECSCEEEEEEEETTEEEEEEESS--SCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSB---
T ss_pred cCCEEEECCEEEEEEEcCCeEEEEEecc--CCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcc---
Confidence 899999998877 3444566777651 1112568899999999999999887668888877 569999999999
Q ss_pred CCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEE
Q 008850 400 ANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVS 479 (551)
Q Consensus 400 ~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~ 479 (551)
|+.|||||+|||++.+++++.|..||+++|+||+|.+.++++..+|+++|++|+++++|+||+||++. |++++
T Consensus 314 ---t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~----g~~~~ 386 (482)
T 1ojt_A 314 ---TNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKAS----ARKIT 386 (482)
T ss_dssp ---CSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECSSSCEEEEECCHHHHHHH----TCCEE
T ss_pred ---cCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCEEEEcCCCeEEEeCCHHHHHhc----CCCEE
Confidence 89999999999999989999999999999999999877788889999999999999999999999875 89999
Q ss_pred EEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 480 VAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+..++|..+.++...+++++|+||++|++ +++|||+|++|+.+.++|+.++.+..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai~ 441 (482)
T 1ojt_A 387 KANFPWAASGRAIANGCDKPFTKLIFDAE-TGRIIGGGIVGPNGGDMIGEVCLAIE 441 (482)
T ss_dssp EEEEEGGGCHHHHHTTCCSCEEEEEEETT-TCBEEEEEEESTTHHHHHHHHHHHHH
T ss_pred EEEEEcCcchHHhhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 99999999999998888899999999987 79999999999999999988876543
No 9
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=3.3e-62 Score=518.92 Aligned_cols=413 Identities=27% Similarity=0.419 Sum_probs=367.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
.++||+|||||++|+++|..|+++|++|+|||++.+||+|.+.+|+|++.++..+.....+ .....+|+......++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~---~~~~~~g~~~~~~~~~ 101 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEF---SKSIGFGWKYADPIFN 101 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHH---HHHGGGTBCCCCCEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHH---HHHHhCCcccCCCccC
Confidence 4699999999999999999999999999999999999999999999999999888766554 3456678877667789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeC-cceEEEeCeEEEeCCCCCC-CCCCccCCCceee
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFG-TDNIVTAKDIIIATGSVPF-VPKGIEVDGKTVI 257 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~-~g~~i~~d~lVlAtG~~p~-~p~~~~~~~~~v~ 257 (551)
+..+..+.......+...+...+...+++++.+.+.+.+.+.+.+. ++.++.||+||||||+.|. .|++++.+ .++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~--~~~ 179 (484)
T 3o0h_A 102 WEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSD--LCL 179 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGG--GSB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc--ccc
Confidence 9999999888888888888888899999999999999888888886 6788999999999999998 88766643 367
Q ss_pred cchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE--
Q 008850 258 TSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT-- 335 (551)
Q Consensus 258 ~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~-- 335 (551)
+++++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+.
T Consensus 180 ~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~-~Gv~i~~~~~V~~i 258 (484)
T 3o0h_A 180 TSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVA-KGISIIYEATVSQV 258 (484)
T ss_dssp CTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-HTCEEESSCCEEEE
T ss_pred cHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHH-CCCEEEeCCEEEEE
Confidence 88888888888999999999999999999999999999999999999999999999999999987 899999988776
Q ss_pred -eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEecC
Q 008850 336 -KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCIGD 413 (551)
Q Consensus 336 -~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD 413 (551)
.+++.+.+++.++ +++++|.|++|+|++|++..+.++..++.. ++|+|.||+++| |+.|||||+||
T Consensus 259 ~~~~~~v~v~~~~g------~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~------t~~~~Iya~GD 326 (484)
T 3o0h_A 259 QSTENCYNVVLTNG------QTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMT------TNVSHIWAVGD 326 (484)
T ss_dssp EECSSSEEEEETTS------CEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSB------CSSTTEEECGG
T ss_pred EeeCCEEEEEECCC------cEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCC------CCCCCEEEEEe
Confidence 4445567777665 589999999999999999987777778877 679999999999 89999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHcCCC-ccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchhhh
Q 008850 414 ANGKMMLAHAASAQGISVVEQVTGRD-HVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKAL 492 (551)
Q Consensus 414 ~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (551)
|++.+++++.|..||+++|+||+|.. ...++..+|+++|++|+++++|+||+||+++ |+++++++.+|..+.+++
T Consensus 327 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~----g~~~~~~~~~~~~~~~~~ 402 (484)
T 3o0h_A 327 VTGHIQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHR----YKRVEIYRTVFRPMRNVL 402 (484)
T ss_dssp GGTSCCCHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHH----CSEEEEEEEEECCHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHc----CCCEEEEEecCCcchhhc
Confidence 99989999999999999999999864 4467889999999999999999999999986 889999999999999999
Q ss_pred hcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 493 AENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 493 ~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+.+.++||+||++|++ +++|||+|++|+.+.++|+.++....
T Consensus 403 ~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai~ 444 (484)
T 3o0h_A 403 SGSPEKMFMKLVVDGE-SRIVVGAHVLGENAGEIAQLIGISLK 444 (484)
T ss_dssp HTCCCCEEEEEEEETT-TCBEEEEEEESTTHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEEEEECC-CCEEEEEEEECcCHHHHHHHHHHHHH
Confidence 9999999999999988 89999999999999999998866543
No 10
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.1e-61 Score=512.00 Aligned_cols=410 Identities=35% Similarity=0.565 Sum_probs=358.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
++||+|||||+||+++|..|++.|++|+|||++.+||+|.+.+|+|+|.++.....++.+ .+...+|++ ....+++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~---~~~~~~g~~-~~~~~~~ 81 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHL---KVAEGFGLK-AKPELDL 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHH---HHHGGGTEE-CCCEECH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHH---HhHHhcCCC-CCCCcCH
Confidence 589999999999999999999999999999997799999999999999988777665544 244556776 4456788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCC-CccCCCceeecc
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPK-GIEVDGKTVITS 259 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~-~~~~~~~~v~~~ 259 (551)
..+..+.....+.+...+...+++.+|+++.+++.+.+.+.+.+. ++++.||+||||||++|..|+ +++ ++ .++++
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~-~~-~v~~~ 158 (464)
T 2eq6_A 82 KKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSEPLELKGFPF-GE-DVWDS 158 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEEECCBTTBCC-SS-SEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCC-CC-cEEcH
Confidence 888888888888777777777888999999999888888888886 678999999999999998886 333 22 47788
Q ss_pred hhhhcccc-CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE---
Q 008850 260 DHALKLEF-VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT--- 335 (551)
Q Consensus 260 ~~~~~~~~-~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~--- 335 (551)
+++..+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+.
T Consensus 159 ~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~gV~i~~~~~v~~i~ 237 (464)
T 2eq6_A 159 TRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEK-EGIRVRTKTKAVGYE 237 (464)
T ss_dssp HHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-TTCEEECSEEEEEEE
T ss_pred HHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHh-cCCEEEcCCEEEEEE
Confidence 88888876 7999999999999999999999999999999999999999999999999999987 899999998877
Q ss_pred eCCCcEEEEEe-c--ccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEe
Q 008850 336 KDGKPVTIELI-D--AKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCI 411 (551)
Q Consensus 336 ~~~~~~~v~~~-~--g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~ 411 (551)
.+++.+.+++. + + +..++++|.|++|+|++|+++.+.++..++.. ++|+|.||+++| |+.|+|||+
T Consensus 238 ~~~~~~~v~~~~~~~g----~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~------t~~~~Iya~ 307 (464)
T 2eq6_A 238 KKKDGLHVRLEPAEGG----EGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARME------TSVPGVYAI 307 (464)
T ss_dssp EETTEEEEEEEETTCC----SCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCB------CSSTTEEEC
T ss_pred EeCCEEEEEEeecCCC----ceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcc------cCCCCEEEE
Confidence 33445667765 3 3 22379999999999999999876667777776 689999999999 899999999
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchhh
Q 008850 412 GDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKA 491 (551)
Q Consensus 412 GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~ 491 (551)
|||++.+++++.|..||+++|+||+|.+.++++. +|+++|++|+++++|++|++|++. |+++++.+.+|..+.++
T Consensus 308 GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~~~~~~~~a~vG~~e~~a~~~----g~~~~~~~~~~~~~~~~ 382 (464)
T 2eq6_A 308 GDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQ-VPSVVYTSPEWAGVGLTEEEAKRA----GYKVKVGKFPLAASGRA 382 (464)
T ss_dssp GGGTCSSCCHHHHHHHHHHHHHHHTTCCCCCCCC-CCEEECSSSEEEEEECCHHHHHHT----TCCEEEEEEEGGGCHHH
T ss_pred eccCCCcccHHHHHHHHHHHHHHhcCCCcccCCC-CCeEEECCCCEEEEeCCHHHHHhc----CCCEEEEEEEcCcchhh
Confidence 9999999999999999999999999977777888 999999999999999999999875 89999999999999999
Q ss_pred hhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 492 LAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 492 ~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
...++++||+|+++|++ +++|||+|++|+.+.++|+.++.+.
T Consensus 383 ~~~~~~~g~~k~~~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai 424 (464)
T 2eq6_A 383 LTLGGAEGMVKVVGDEE-TDLLLGVFIVGPQAGELIAEAALAL 424 (464)
T ss_dssp HHTSCCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHH
T ss_pred hhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 88888899999999987 7999999999999999998886654
No 11
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.4e-61 Score=512.47 Aligned_cols=418 Identities=30% Similarity=0.510 Sum_probs=361.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccc-ccccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQV-HAAGY 178 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~ 178 (551)
++||+|||||+||+++|.+|++.|++|+|||+ +.+||+|.+.+|+|++.++......+.+.. .+..+|++. ....+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~--~~~~~g~~~~~~~~~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHA--NFARYGLMGGEGVTM 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--THHHHTEECGGGCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHH--HHHhcCcccCCCCcc
Confidence 48999999999999999999999999999999 489999999999999998877665554421 144567664 34457
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc--eEEEeCeEEEeCCCCCCCCCCccCCCc
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD--NIVTAKDIIIATGSVPFVPKGIEVDGK 254 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g--~~i~~d~lVlAtG~~p~~p~~~~~~~~ 254 (551)
++..+..+.....+.+...+...+++.+++++.+++.+++.+.+.+ .+| .++.||+||+|||+.|..|++++.+..
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~ 159 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEK 159 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcC
Confidence 8888888888888888777778888889999999987777655444 455 689999999999999998887776655
Q ss_pred eeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHH-hCCCceEEEeceE
Q 008850 255 TVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVL-INPRKIDYHTGVF 333 (551)
Q Consensus 255 ~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l-~~~~gi~~~~~~~ 333 (551)
.+++++++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+ ++ .||+++++..
T Consensus 160 ~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-~gv~i~~~~~ 238 (468)
T 2qae_A 160 VVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKN-EKMKFMTSTK 238 (468)
T ss_dssp SEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHH-TCCEEECSCE
T ss_pred ceechHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhc-CCcEEEeCCE
Confidence 688999988888889999999999999999999999999999999999999999999999999999 86 8999999988
Q ss_pred EE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEE
Q 008850 334 AT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLY 409 (551)
Q Consensus 334 ~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~Iy 409 (551)
+. .+++.+.+++.+. +++.+++++|.|++|+|++||++++.++..++.. ++|+|.||+++| |+.||||
T Consensus 239 v~~i~~~~~~~~v~~~~~--~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~------t~~~~Iy 310 (468)
T 2qae_A 239 VVGGTNNGDSVSLEVEGK--NGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFE------TSIPDVY 310 (468)
T ss_dssp EEEEEECSSSEEEEEECC-----EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSB------CSSTTEE
T ss_pred EEEEEEcCCeEEEEEEcC--CCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcc------cCCCCEE
Confidence 77 3344466776521 1122579999999999999999987667777776 579999999999 8999999
Q ss_pred EecCCCC-CCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccc
Q 008850 410 CIGDANG-KMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKAN 488 (551)
Q Consensus 410 A~GD~~~-~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~ 488 (551)
|+|||++ .+++++.|..||+++|+||+|++.++++..+|+++|++|+++++|++|++|++. |+++++.+.+|..+
T Consensus 311 A~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~----g~~~~~~~~~~~~~ 386 (468)
T 2qae_A 311 AIGDVVDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKE----GVAYKVGKFPFNAN 386 (468)
T ss_dssp ECGGGBSSSCSCHHHHHHHHHHHHHHHTTCCCCCCTTSCCEEECSSSEEEEEECCHHHHHHT----TCCEEEEEEEGGGC
T ss_pred EeeccCCCCCccHhHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHHHHhc----CCCEEEEEEecccc
Confidence 9999999 889999999999999999999877788889999999999999999999999875 89999999999999
Q ss_pred hhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 489 TKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 489 ~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
.++...++++||+||++|++ +++|||+|++|+.+.++|+.++.+.
T Consensus 387 ~~~~~~~~~~~~~kl~~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai 431 (468)
T 2qae_A 387 SRAKAVSTEDGFVKVLVDKA-TDRILGVHIVCTTAGELIGEACLAM 431 (468)
T ss_dssp HHHHHTTCCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHH
T ss_pred hhhhhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 99998888899999999987 7999999999999999998887653
No 12
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.8e-61 Score=513.29 Aligned_cols=412 Identities=25% Similarity=0.408 Sum_probs=361.8
Q ss_pred cccEEEECCChHHHHHHHHHHH-cCCcEEEee---------CCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVE-KGLKTAIIE---------GDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALG 170 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~-~g~~V~liE---------~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g 170 (551)
+|||+|||||++|+++|.+|++ .|++|+||| ++.+||+|.+++|+|+|.++..+...+.+. ....+|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~---~~~~~g 79 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIR---ESAGFG 79 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHH---HGGGGT
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHH---HHHhcC
Confidence 5899999999999999999999 999999999 688999999999999999998877665543 345567
Q ss_pred cccccc--ccCHHHHHHHHHHHHHHHHHHHHHHHHHc-CeEEEeceEEEeCCcEEEeC-----cc---eEEEeCeEEEeC
Q 008850 171 LQVHAA--GYDRQGVADHANNLATKIRNNLTNSMKAL-GVDILTGVGTILGPQKVKFG-----TD---NIVTAKDIIIAT 239 (551)
Q Consensus 171 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~v~~~-----~g---~~i~~d~lVlAt 239 (551)
+..... .+++..+.++.....+.+...+...++.. +|+++.+++.+++.+.+.+. ++ .++.||+|||||
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAt 159 (490)
T 1fec_A 80 WELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLAT 159 (490)
T ss_dssp EECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred cccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeC
Confidence 765444 67899999999888888888888888888 99999999888888888773 55 689999999999
Q ss_pred CCCCCCCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhC---CCeEEEEcccCcCCCCCCHHHHHHH
Q 008850 240 GSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTAL---GSEVTFIEALDQLMPGFDPEIGKLA 316 (551)
Q Consensus 240 G~~p~~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~~~l~~~~~~~~~~~ 316 (551)
|+.|..|++++. ..+++++++..+...+++++|||+|++|+|+|..|.+. |.+|+++++.+++++.+++++.+.+
T Consensus 160 Gs~p~~p~i~g~--~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l 237 (490)
T 1fec_A 160 GSWPQHLGIEGD--DLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQL 237 (490)
T ss_dssp CEEECCCCSBTG--GGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHH
T ss_pred CCCCCCCCCCCc--cceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHH
Confidence 999998886655 24678888888888899999999999999999999999 9999999999999999999999999
Q ss_pred HHHHhCCCceEEEeceEEE---eCC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceee
Q 008850 317 QRVLINPRKIDYHTGVFAT---KDG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPV 391 (551)
Q Consensus 317 ~~~l~~~~gi~~~~~~~~~---~~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~V 391 (551)
.+.+++ .||+++++..+. .++ ..+.+++.++ +++++|.|++|+|++|+++.|.++..++.. ++|+|.|
T Consensus 238 ~~~l~~-~GV~i~~~~~v~~i~~~~~~~~~v~~~~G------~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~V 310 (490)
T 1fec_A 238 TEQLRA-NGINVRTHENPAKVTKNADGTRHVVFESG------AEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKV 310 (490)
T ss_dssp HHHHHH-TTEEEEETCCEEEEEECTTSCEEEEETTS------CEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCC
T ss_pred HHHHHh-CCCEEEeCCEEEEEEEcCCCEEEEEECCC------cEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEE
Confidence 999987 899999998776 232 3467777654 579999999999999999876667788877 5899999
Q ss_pred CCCCccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCC-ccCCCCCcceEEEcCCCeeEecCCHHHHHhh
Q 008850 392 DERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRD-HVLNHLSIPAACFTHPEISMVGLTEPQAREK 470 (551)
Q Consensus 392 d~~~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~ 470 (551)
|+++| |+.|+|||+|||++.+++++.|..||+++|+||+|.. ...+|..+|+++|++|+++++|++|++|+++
T Consensus 311 d~~~~------t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~ 384 (490)
T 1fec_A 311 DAYSK------TNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKK 384 (490)
T ss_dssp CTTCB------CSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHH
T ss_pred CCCCc------cCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhc
Confidence 99999 8999999999999988899999999999999999853 4567889999999999999999999999875
Q ss_pred chhcCCeEEEEEEecccchhhhhcCCCceEE-EEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 471 AEKEGFEVSVAKTSFKANTKALAENEGEGLA-KGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+.++++.+.+|..+.+++..+.+++|+ ||++|++ +++|||+|++|+.+.++|+.++.+..
T Consensus 385 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai~ 445 (490)
T 1fec_A 385 ----YDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHA-DGEVLGVHMLGDSSPEIIQSVAICLK 445 (490)
T ss_dssp ----CSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETT-TTEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred ----CCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 678888999999999999888889999 9999987 89999999999999999998876543
No 13
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=6.4e-62 Score=511.78 Aligned_cols=413 Identities=30% Similarity=0.466 Sum_probs=359.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
.++||+|||||++|+++|.+|++.|++|+|||++.+||+|.+.+|+|+|.++..+.....+. .....+++......++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~--~~~~~~g~~~~~~~~~ 80 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIH--MYGPDYGFDTTINKFN 80 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHH--TTGGGGTEEEEEEEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHH--HHHHhcCccCCCCccC
Confidence 35899999999999999999999999999999999999999999999999988776555443 1334566665555688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCceeecc
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITS 259 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v~~~ 259 (551)
+..+..+.....+.+...+...++..+++++.+++..++.+.|.+ +++++.||+||||||+.|..|++++.+ .++++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~~--~~~~~ 157 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPSHPDIPGVE--YGIDS 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEECCCCSTTGG--GSBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCCCCCCCCcc--ceecH
Confidence 999998888888888888888888899999999888888888888 567899999999999999988766542 46778
Q ss_pred hhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE---e
Q 008850 260 DHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT---K 336 (551)
Q Consensus 260 ~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~---~ 336 (551)
+++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+. .
T Consensus 158 ~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~ 236 (450)
T 1ges_A 158 DGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNA-EGPQLHTNAIPKAVVK 236 (450)
T ss_dssp HHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-HSCEEECSCCEEEEEE
T ss_pred HHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHH-CCCEEEeCCEEEEEEE
Confidence 888888788999999999999999999999999999999999999999999999999999987 899999998776 2
Q ss_pred CC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEecCC
Q 008850 337 DG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCIGDA 414 (551)
Q Consensus 337 ~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~ 414 (551)
++ ..+.+++.++ +++++|.|++|+|++|+++.|.++..++.. ++|+|.||+++| |+.|||||+|||
T Consensus 237 ~~~~~~~v~~~~g------~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~------t~~~~IyA~GD~ 304 (450)
T 1ges_A 237 NTDGSLTLELEDG------RSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQN------TNIEGIYAVGDN 304 (450)
T ss_dssp CTTSCEEEEETTS------CEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSB------CSSTTEEECSGG
T ss_pred eCCcEEEEEECCC------cEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCc------cCCCCEEEEecc
Confidence 32 2367777665 579999999999999999866567777776 589999999999 899999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHcCCC-cc-CCCCCcceEEEcCCCeeEecCCHHHHHhhchhcC-CeEEEEEEecccchhh
Q 008850 415 NGKMMLAHAASAQGISVVEQVTGRD-HV-LNHLSIPAACFTHPEISMVGLTEPQAREKAEKEG-FEVSVAKTSFKANTKA 491 (551)
Q Consensus 415 ~~~~~~~~~A~~~g~~aa~~i~g~~-~~-~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~-~~~~~~~~~~~~~~~~ 491 (551)
++.+++++.|..||+++|+||+|.. .. .+|..+|+++|++|+++++|++|++|++++ | .++++.+.+|..+.++
T Consensus 305 ~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~---g~~~~~~~~~~~~~~~~~ 381 (450)
T 1ges_A 305 TGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQY---GDDQVKVYKSSFTAMYTA 381 (450)
T ss_dssp GTSCCCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHH---CGGGEEEEEEEEECHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcC---CCCcEEEEEEECchhhHH
Confidence 9888999999999999999999854 33 578889999999999999999999998753 4 5788889999999999
Q ss_pred hhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 492 LAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 492 ~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
+..+.+++|+||++|++ +++|||+|++|+++.++|+.++..-
T Consensus 382 ~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai 423 (450)
T 1ges_A 382 VTTHRQPCRMKLVCVGS-EEKIVGIHGIGFGMDEMLQGFAVAL 423 (450)
T ss_dssp TSSSCCEEEEEEEEETT-TTEEEEEEEESTTHHHHHHHHHHHH
T ss_pred HhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 98888899999999987 8999999999999999999987654
No 14
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.9e-61 Score=507.11 Aligned_cols=416 Identities=31% Similarity=0.534 Sum_probs=360.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
++||+|||||+||+++|.+|++.|++|+|||++.+||+|.+.+|+|++.++.....++.+ .++..+|+......+++
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~---~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQA---KHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHH---HTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHH---HHHHhcCcccCCCccCH
Confidence 489999999999999999999999999999999899999999999999988776665544 34455677655556788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEE--eCcc-eEEEeCeEEEeCCCCCCCCCCccCCCceee
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVK--FGTD-NIVTAKDIIIATGSVPFVPKGIEVDGKTVI 257 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~--~~~g-~~i~~d~lVlAtG~~p~~p~~~~~~~~~v~ 257 (551)
..+..+.....+.+...+...+++.+++++.++..+++.+.+. +.++ .++.||+||+|||+.|..|++++.+.. ++
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~-v~ 158 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNR-IL 158 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSS-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccce-Ee
Confidence 8888887777777877778888889999999998777665444 4455 679999999999999998887765544 78
Q ss_pred cchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE--
Q 008850 258 TSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT-- 335 (551)
Q Consensus 258 ~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~-- 335 (551)
++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+.
T Consensus 159 ~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~gv~i~~~~~v~~i 237 (455)
T 1ebd_A 159 DSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKK-KGVEVVTNALAKGA 237 (455)
T ss_dssp CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHH-TTCEEEESEEEEEE
T ss_pred cHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHH-CCCEEEeCCEEEEE
Confidence 88888888778999999999999999999999999999999999999999999999999999987 899999998877
Q ss_pred -eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEecC
Q 008850 336 -KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCIGD 413 (551)
Q Consensus 336 -~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD 413 (551)
.+++.+.+++.+ .++++++++|.|++|+|++|+++++.++..++.. ++|+|.||+++| |+.|+|||+||
T Consensus 238 ~~~~~~~~v~~~~---~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~------t~~~~Iya~GD 308 (455)
T 1ebd_A 238 EEREDGVTVTYEA---NGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCR------TSVPNIFAIGD 308 (455)
T ss_dssp EEETTEEEEEEEE---TTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCB------CSSTTEEECGG
T ss_pred EEeCCeEEEEEEe---CCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcc------cCCCCEEEEec
Confidence 334446666642 1123679999999999999999987667788876 579999999999 89999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchhhhh
Q 008850 414 ANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALA 493 (551)
Q Consensus 414 ~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (551)
|++.+++++.|..||+++|+||+|++.+++|..+|+++|++|+++++|++|++|++. |+++++.+.++..+.++..
T Consensus 309 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~----g~~~~~~~~~~~~~~~~~~ 384 (455)
T 1ebd_A 309 IVPGPALAHKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQQAKDE----GIDVIAAKFPFAANGRALA 384 (455)
T ss_dssp GSSSCCCHHHHHHHHHHHHHHHTSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHTT----TCCEEEEEEEGGGCHHHHH
T ss_pred cCCCcccHHHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHHHHhc----CCCEEEEEEEcCcchHHhh
Confidence 999889999999999999999999877788889999999999999999999999874 8999999999999999988
Q ss_pred cCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 494 ENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 494 ~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
.+++++|+|+++|++ +++|||+|++|+.+.++|+.++.+..
T Consensus 385 ~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai~ 425 (455)
T 1ebd_A 385 LNDTDGFLKLVVRKE-DGVIIGAQIIGPNASDMIAELGLAIE 425 (455)
T ss_dssp HTCCCCEEEEEEETT-TTEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEEECC-CCEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 888899999999987 79999999999999999988876543
No 15
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.7e-61 Score=512.46 Aligned_cols=421 Identities=31% Similarity=0.528 Sum_probs=361.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.++||+|||||+||+++|..|++.|++|+|||+ +.+||+|.+.+|+|+|.++.....++.+.. ..+..+|++.....+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 83 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHG-TDFASRGIEMSEVRL 83 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHS-SHHHHTTEEESCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhh-hhHhhCccccCCCcc
Confidence 358999999999999999999999999999999 589999999999999998877665544320 134566776544567
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Cc-c-eEEEeCeEEEeCCCCCCCCCCccCCCc
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GT-D-NIVTAKDIIIATGSVPFVPKGIEVDGK 254 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~-g-~~i~~d~lVlAtG~~p~~p~~~~~~~~ 254 (551)
++..+..+.+.+.+.+...+...+++.+|+++.++..+++.+.+.+ .+ + .++.||+||+|||+.|..|++++.+..
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~ 163 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDED 163 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcC
Confidence 8888888888888888777778888899999999987776655443 44 3 579999999999999999887777666
Q ss_pred eeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC-CCCHHHHHHHHHHHhCCCceEEEeceE
Q 008850 255 TVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP-GFDPEIGKLAQRVLINPRKIDYHTGVF 333 (551)
Q Consensus 255 ~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~~gi~~~~~~~ 333 (551)
.+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.+++ .||+++++..
T Consensus 164 ~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~-~Gv~i~~~~~ 242 (474)
T 1zmd_A 164 TIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK-QGFKFKLNTK 242 (474)
T ss_dssp SEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHH-TTCEEECSEE
T ss_pred cEEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHH-CCCEEEeCce
Confidence 6889888888877899999999999999999999999999999999999999 8999999999999987 8999999988
Q ss_pred EE---eCCCc-EEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcE
Q 008850 334 AT---KDGKP-VTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHL 408 (551)
Q Consensus 334 ~~---~~~~~-~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~I 408 (551)
+. .+++. +.+++.+.. .++++++++|.|++|+|++||++++.++..++.. ++|+|.||+++| |+.|+|
T Consensus 243 v~~i~~~~~~~~~v~~~~~~-~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~------t~~~~I 315 (474)
T 1zmd_A 243 VTGATKKSDGKIDVSIEAAS-GGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQ------TKIPNI 315 (474)
T ss_dssp EEEEEECTTSCEEEEEEETT-SCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCB------CSSTTE
T ss_pred EEEEEEcCCceEEEEEEecC-CCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCc------cCCCCE
Confidence 77 33333 666654211 1233689999999999999999986667777776 579999999999 899999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccc
Q 008850 409 YCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKAN 488 (551)
Q Consensus 409 yA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~ 488 (551)
||+|||++.+++++.|..||++||+||+|++.+++|..+|+++|++|+++++|++|+||++. |+++++.+.+|..+
T Consensus 316 yA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~----g~~~~~~~~~~~~~ 391 (474)
T 1zmd_A 316 YAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE----GIEYKVGKFPFAAN 391 (474)
T ss_dssp EECGGGSSSCCCHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEECSSSEEEEEECCHHHHHHH----TCCEEEEEEEGGGC
T ss_pred EEeeecCCCCccHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhc----CCCEEEEEEecccc
Confidence 99999999889999999999999999999877778889999999999999999999999875 89999999999999
Q ss_pred hhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 489 TKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 489 ~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
.++...+++++|+|+++|++ +++|||+|++|+.+.++|+.++.+.
T Consensus 392 ~~~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai 436 (474)
T 1zmd_A 392 SRAKTNADTDGMVKILGQKS-TDRVLGAHILGPGAGEMVNEAALAL 436 (474)
T ss_dssp HHHHHTTCCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHH
T ss_pred hhhhhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 99998888899999999987 7999999999999999888776543
No 16
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=2.8e-61 Score=508.55 Aligned_cols=412 Identities=30% Similarity=0.461 Sum_probs=357.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
.++||+|||||++|+++|.+|++.|++|+|||++.+||+|.+.+|+|++.++..+.....+. ....+|+......++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~---~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVR---DAPGFGVQASGGTLD 79 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHH---HGGGGTBCCC---CC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHh---hhhhcCcccCCCCcC
Confidence 45899999999999999999999999999999998999999999999999888776655543 344567665555678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCceeecc
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITS 259 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v~~~ 259 (551)
+..+..+.......+...+...+...+|+++.+++..++.+.|.+ ++.++.||+||||||+.|..|++++.+ .++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~~--~~~~~ 156 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPIVPRLPGAE--LGITS 156 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEECCCSCTTGG--GSBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCCCCCCCCcc--ceecH
Confidence 999998888888888888888888899999999988888888888 567899999999999999988766542 36778
Q ss_pred hhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE---e
Q 008850 260 DHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT---K 336 (551)
Q Consensus 260 ~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~---~ 336 (551)
+++..+...+++++|||+|.+|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+. .
T Consensus 157 ~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~ 235 (463)
T 2r9z_A 157 DGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHA-QGIETHLEFAVAALER 235 (463)
T ss_dssp HHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-TTCEEESSCCEEEEEE
T ss_pred HHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHH-CCCEEEeCCEEEEEEE
Confidence 888888788999999999999999999999999999999999999999999999999999987 899999998776 3
Q ss_pred CCCcEEEEEecccCCCCCe-EEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEecCC
Q 008850 337 DGKPVTIELIDAKTKEPKD-TLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCIGDA 414 (551)
Q Consensus 337 ~~~~~~v~~~~g~~~~~~~-~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~ 414 (551)
+++...+++.+| + ++++|.|++|+|++|+++.+.++..++.. ++|+|.||+++| |+.|||||+|||
T Consensus 236 ~~~~~~v~~~~G------~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~------t~~~~Iya~GD~ 303 (463)
T 2r9z_A 236 DAQGTTLVAQDG------TRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQN------TNVPGVYALGDI 303 (463)
T ss_dssp ETTEEEEEETTC------CEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSB------CSSTTEEECGGG
T ss_pred eCCeEEEEEeCC------cEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCc------cCCCCEEEEeec
Confidence 334467777655 4 79999999999999999866556677776 589999999999 899999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHcCCC-cc-CCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchhhh
Q 008850 415 NGKMMLAHAASAQGISVVEQVTGRD-HV-LNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKAL 492 (551)
Q Consensus 415 ~~~~~~~~~A~~~g~~aa~~i~g~~-~~-~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (551)
++.+++++.|..||+++|.||+|.. .. .+|..+|+++|++|+++++|++|++|++++ |.++++.+.+|..+.+++
T Consensus 304 ~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~---g~~~~~~~~~~~~~~~~~ 380 (463)
T 2r9z_A 304 TGRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERL---GDVLTVYETSFTPMRYAL 380 (463)
T ss_dssp GTSCCCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHH---CSCEEEEEEEECCGGGTT
T ss_pred CCCcccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcC---CCCEEEEEEEcccchhhh
Confidence 9888999999999999999999864 33 578899999999999999999999998753 577888899999999999
Q ss_pred hcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 493 AENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 493 ~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
..+.+++|+||++|++ +++|||+|++|+++.++|+.++..-
T Consensus 381 ~~~~~~~~~klv~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai 421 (463)
T 2r9z_A 381 NEHGPKTAMKLVCAGP-EQRVVGVHVIGDGADEMLQGFAVAV 421 (463)
T ss_dssp SSSCCCEEEEEEEETT-TTEEEEEEEESTTGGGTSHHHHHHH
T ss_pred hcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 8888899999999987 7999999999999999998886543
No 17
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.3e-61 Score=507.04 Aligned_cols=420 Identities=33% Similarity=0.526 Sum_probs=361.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.++||+|||||+||+++|..|++.|++|+|||+ +.+||+|.+.+|+|++.++.....++.+.. .+..+|++.....+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~~~~~g~~~~~~~~ 82 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKH--SFANHGVKVSNVEI 82 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHH--THHHHTEEESCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHH--HHHhcCcccCCCcc
Confidence 358999999999999999999999999999999 589999999999999988877665554432 14456666544556
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc--eEEEeCeEEEeCCCCCCCCCCccCCCc
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD--NIVTAKDIIIATGSVPFVPKGIEVDGK 254 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g--~~i~~d~lVlAtG~~p~~p~~~~~~~~ 254 (551)
++..+..+.....+.+...+...+++.+++++.++....+...+.+ .+| .++.||+||+|||+.|..|++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~ 162 (470)
T 1dxl_A 83 DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEK 162 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCcc
Confidence 8888888777777777777777788889999999987776665554 355 689999999999999998887776655
Q ss_pred eeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEE
Q 008850 255 TVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFA 334 (551)
Q Consensus 255 ~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~ 334 (551)
.++++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+
T Consensus 163 ~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~-~gv~i~~~~~v 241 (470)
T 1dxl_A 163 KIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEK-QGMKFKLKTKV 241 (470)
T ss_dssp SEECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-SSCCEECSEEE
T ss_pred cEEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHH-cCCEEEeCCEE
Confidence 68888888888778999999999999999999999999999999999999999999999999999987 89999999888
Q ss_pred E---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEE
Q 008850 335 T---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYC 410 (551)
Q Consensus 335 ~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA 410 (551)
. .+++.+.+++.+.. +++.+++++|.|++|+|++||++++.++..++.. ++|+|.||+++| |+.|+|||
T Consensus 242 ~~i~~~~~~~~v~~~~~~-~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~------t~~~~Iya 314 (470)
T 1dxl_A 242 VGVDTSGDGVKLTVEPSA-GGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFS------TNVSGVYA 314 (470)
T ss_dssp EEEECSSSSEEEEEEESS-SCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCB------CSSTTEEE
T ss_pred EEEEEcCCeEEEEEEecC-CCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCc------cCCCCEEE
Confidence 7 23344666665210 1123679999999999999999987667888877 579999999999 89999999
Q ss_pred ecCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchh
Q 008850 411 IGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTK 490 (551)
Q Consensus 411 ~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~ 490 (551)
+|||++.+++++.|..||++||+||+|++.+++|..+|+++|++|+++++|++|+||++. |+++++.+++|..+.+
T Consensus 315 ~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~----g~~~~~~~~~~~~~~~ 390 (470)
T 1dxl_A 315 IGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKET----GVEYRVGKFPFMANSR 390 (470)
T ss_dssp CSTTSSSCCCHHHHHHHHHHHHHHHTTSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHT----TCCEEEEEEEGGGCHH
T ss_pred EeccCCCCccHHHHHHHHHHHHHHHcCCCcCCCCCCCCEEEECCCceEEEcCCHHHHHhc----CCcEEEEEEecccchH
Confidence 999999889999999999999999999877788889999999999999999999999875 8999999999999999
Q ss_pred hhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 491 ALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 491 ~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
+...+++++|+||++|++ +++|||+|++|+.+.++|+.++.+.
T Consensus 391 ~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai 433 (470)
T 1dxl_A 391 AKAIDNAEGLVKIIAEKE-TDKILGVHIMAPNAGELIHEAAIAL 433 (470)
T ss_dssp HHHHSCCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 988888899999999987 7999999999999999998887654
No 18
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.9e-61 Score=509.89 Aligned_cols=413 Identities=26% Similarity=0.431 Sum_probs=358.1
Q ss_pred cccEEEECCChHHHHHHHHHHHc---CCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcc--ccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEK---GLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQ--VHA 175 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~---g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~ 175 (551)
++||+|||||++|+++|.+|++. |++|+|||+..+||+|.+++|+|+|.++..+..++.+. .+..+|++ ...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~---~~~~~g~~~~~~~ 78 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELR---RAPHLGFHIDFDD 78 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHT---TTTTTTBC-----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHH---HHHhCCCccccCC
Confidence 48999999999999999999999 99999999966999999999999999888776554432 34445665 334
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCC------cEEEe--Ccce--EEEeCeEEEeCCCCCCC
Q 008850 176 AGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGP------QKVKF--GTDN--IVTAKDIIIATGSVPFV 245 (551)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------~~v~~--~~g~--~i~~d~lVlAtG~~p~~ 245 (551)
..+++..+..+.....+.+...+...+++.+++++.+++.+++. +.+.+ .++. ++.||+||+|||+.|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~ 158 (499)
T 1xdi_A 79 AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRI 158 (499)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC
Confidence 45688888888888888888778888888999999999877766 54443 4454 79999999999999998
Q ss_pred CCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCc
Q 008850 246 PKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRK 325 (551)
Q Consensus 246 p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~g 325 (551)
|++++.+...++++.++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++ .|
T Consensus 159 p~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~-~G 237 (499)
T 1xdi_A 159 LPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAE-RG 237 (499)
T ss_dssp CGGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHH-TT
T ss_pred CCCCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHH-CC
Confidence 88777666668888888888888999999999999999999999999999999999999999999999999999987 89
Q ss_pred eEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCC
Q 008850 326 IDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDAN 401 (551)
Q Consensus 326 i~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~ 401 (551)
|+++++..+. .+++.+.+++.++ +++++|.|++|+|++|++++++++.+++.. ++|+|.||+++|
T Consensus 238 V~i~~~~~V~~i~~~~~~v~v~~~~g------~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~----- 306 (499)
T 1xdi_A 238 VRLFKNARAASVTRTGAGVLVTMTDG------RTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSR----- 306 (499)
T ss_dssp CEEETTCCEEEEEECSSSEEEEETTS------CEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSB-----
T ss_pred CEEEeCCEEEEEEEeCCEEEEEECCC------cEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcc-----
Confidence 9999998776 3444466665443 579999999999999999987678888887 579999999999
Q ss_pred CCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCC-CccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEE
Q 008850 402 GNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGR-DHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSV 480 (551)
Q Consensus 402 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~ 480 (551)
|+.|+|||+|||++.+++++.|..||+++|+||+|+ ...++|..+|+++|++|+++++|++|++|++. |+++++
T Consensus 307 -t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~----g~~~~~ 381 (499)
T 1xdi_A 307 -TLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAG----SVAART 381 (499)
T ss_dssp -CSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHT----SSCEEE
T ss_pred -cCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhC----CCCEEE
Confidence 899999999999999899999999999999999997 45677888999999999999999999999875 999999
Q ss_pred EEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 481 AKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
.+.+|..+.++...++++||+|+++|++ +++|||++++|+.+.++|+.++.+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~g~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai 434 (499)
T 1xdi_A 382 IMLPLRTNARAKMSEMRHGFVKIFCRRS-TGVVIGGVVVAPIASELILPIAVAV 434 (499)
T ss_dssp EEEESTTSHHHHHTTCSSCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHH
T ss_pred EEEecCcccceeecCCCceEEEEEEECC-CCEEEEEEEECCchHHHHHHHHHHH
Confidence 9999999999998888899999999987 7999999999999999988876643
No 19
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=4.9e-61 Score=507.67 Aligned_cols=414 Identities=32% Similarity=0.485 Sum_probs=357.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
++||+|||||+||+++|..|++.|++|+|||+..+||+|.+.+|+|++.++.....++.+. .+...+|+. ....+++
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~--~~~~~~g~~-~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFT--KDAKAFGIS-GEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHH--HHTTTTTEE-ECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHH--HHHHhcCCC-CCCccCH
Confidence 4899999999999999999999999999999988999999999999999888776665543 234456665 3445678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEE--eCcc--eEEEeCeEEEeCCCCCCCCCCccCCCcee
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVK--FGTD--NIVTAKDIIIATGSVPFVPKGIEVDGKTV 256 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~--~~~g--~~i~~d~lVlAtG~~p~~p~~~~~~~~~v 256 (551)
..+..+.......+...+...+++.+|+++.++....+.+.+. +.+| .++.||+||+|||+.|..|++++.+.. +
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~-~ 158 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSAN-V 158 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTT-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCce-E
Confidence 8887777777777777777788889999999988777665544 4456 689999999999999988877665544 7
Q ss_pred ecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE-
Q 008850 257 ITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT- 335 (551)
Q Consensus 257 ~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~- 335 (551)
++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+.
T Consensus 159 ~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~gv~i~~~~~v~~ 237 (464)
T 2a8x_A 159 VTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKK-LGVTILTATKVES 237 (464)
T ss_dssp ECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-HTCEEECSCEEEE
T ss_pred EecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHH-cCCEEEeCcEEEE
Confidence 888888888778999999999999999999999999999999999999999999999999999987 899999998877
Q ss_pred --eCCCcEEEEEe-cccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEe
Q 008850 336 --KDGKPVTIELI-DAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCI 411 (551)
Q Consensus 336 --~~~~~~~v~~~-~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~ 411 (551)
.+++.+.+++. ++ +.+++++|.|++|+|++||++++.++..++.. ++|+|.||+++| |+.|||||+
T Consensus 238 i~~~~~~~~v~~~~~g----~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~------t~~~~IyA~ 307 (464)
T 2a8x_A 238 IADGGSQVTVTVTKDG----VAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMR------TNVGHIYAI 307 (464)
T ss_dssp EEECSSCEEEEEESSS----CEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSB------CSSTTEEEC
T ss_pred EEEcCCeEEEEEEcCC----ceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCc------cCCCCEEEe
Confidence 33444666665 32 23579999999999999999987667777776 579999999999 899999999
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHHcC-CCcc-CCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccch
Q 008850 412 GDANGKMMLAHAASAQGISVVEQVTG-RDHV-LNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANT 489 (551)
Q Consensus 412 GD~~~~~~~~~~A~~~g~~aa~~i~g-~~~~-~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~ 489 (551)
|||++.+++++.|..||+++|+||+| .+.+ ++|..+|+++|++|+++++|++|+||++. |+++++...+|..+.
T Consensus 308 GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~----g~~~~~~~~~~~~~~ 383 (464)
T 2a8x_A 308 GDVNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNE----GYDVVVAKFPFTANA 383 (464)
T ss_dssp GGGGCSSCSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHT----TCCEEEEEEEGGGCH
T ss_pred ECcCCCccCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhc----CCCEEEEEEEcchhh
Confidence 99999889999999999999999998 6666 67888999999999999999999999875 899999999999999
Q ss_pred hhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 490 KALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 490 ~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
++...+++++|+||++|++ +++|||+|++|+.+.++|+.++.+.
T Consensus 384 ~~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai 427 (464)
T 2a8x_A 384 KAHGVGDPSGFVKLVADAK-HGELLGGHLVGHDVAELLPELTLAQ 427 (464)
T ss_dssp HHHHHTCCCCEEEEEEETT-TTEEEEEEEEETTGGGGHHHHHHHH
T ss_pred hhhhcCCCcEEEEEEEECC-CCEEEEEEEECcCHHHHHHHHHHHH
Confidence 9988888899999999987 7999999999999999998887654
No 20
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=2.2e-60 Score=508.28 Aligned_cols=424 Identities=25% Similarity=0.367 Sum_probs=354.5
Q ss_pred CCCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-C--------ccCcccccCCccCChhhHhhHHHHHHHHhhhhhh
Q 008850 97 PKSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-D--------VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMK 167 (551)
Q Consensus 97 ~~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~--------~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 167 (551)
+++.+|||+||||||||++||..|++.|++|+|||+ + .+||+|.+.+|+|+|.++......+.+ .++.
T Consensus 28 ~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~---~~~~ 104 (519)
T 3qfa_A 28 PKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQAL---QDSR 104 (519)
T ss_dssp CSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHH---HHHH
T ss_pred CcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHH---HHHH
Confidence 445579999999999999999999999999999998 3 699999999999999888777655444 4556
Q ss_pred hcCccccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeC--cc--eEEEeCeEEEeCCCC
Q 008850 168 ALGLQVHA-AGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFG--TD--NIVTAKDIIIATGSV 242 (551)
Q Consensus 168 ~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~--~g--~~i~~d~lVlAtG~~ 242 (551)
.+|+.... ..+++..+..+.+.+.+.+...+...++..+|+++.+.+.+.+.+.+.+. ++ .++.||+||||||+.
T Consensus 105 ~~g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~ 184 (519)
T 3qfa_A 105 NYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGER 184 (519)
T ss_dssp HTTBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEE
T ss_pred hcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCC
Confidence 77877543 47899999999999888888888888888999999999998887766653 34 379999999999999
Q ss_pred CCCCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhC
Q 008850 243 PFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLIN 322 (551)
Q Consensus 243 p~~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~ 322 (551)
|+.|++++.. ..+++++++..+...+++++|||+|++|+|+|..|++.|.+||++++. .+++.+|+++.+.+.+.+++
T Consensus 185 p~~p~i~G~~-~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~ 262 (519)
T 3qfa_A 185 PRYLGIPGDK-EYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRGFDQDMANKIGEHMEE 262 (519)
T ss_dssp ECCCCCTTHH-HHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHH
T ss_pred cCCCCCCCcc-CceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cccccCCHHHHHHHHHHHHH
Confidence 9988766532 346788888888888999999999999999999999999999999984 78899999999999999987
Q ss_pred CCceEEEeceEEE----eCC---CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc--CCCceeeCC
Q 008850 323 PRKIDYHTGVFAT----KDG---KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT--QRGFVPVDE 393 (551)
Q Consensus 323 ~~gi~~~~~~~~~----~~~---~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~--~~G~i~Vd~ 393 (551)
.||+++++..+. .++ +.+.+++.... +++..++++|.|++|+|++||++.++++..++.. ++|+|.||+
T Consensus 263 -~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~-g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~ 340 (519)
T 3qfa_A 263 -HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTN-SEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTD 340 (519)
T ss_dssp -TTCEEEESEEEEEEEEEECCTTCEEEEEEEESS-SSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCT
T ss_pred -CCCEEEeCCeEEEEEEccCCCCceEEEEEEECC-CcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCC
Confidence 899999997654 121 34455543321 1112367899999999999999988778888887 479999999
Q ss_pred CCccccCCCCCCCcEEEecCCC-CCCCcHHHHHHHHHHHHHHHcCCC-ccCCCCCcceEEEcCCCeeEecCCHHHHHhhc
Q 008850 394 RMRVIDANGNLVPHLYCIGDAN-GKMMLAHAASAQGISVVEQVTGRD-HVLNHLSIPAACFTHPEISMVGLTEPQAREKA 471 (551)
Q Consensus 394 ~~~~~~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~ 471 (551)
++| |++|||||+|||+ +.+++++.|..||+++|+||+|.. ...++..+|+++|++|+++++|+||+||++++
T Consensus 341 ~~~------Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~ 414 (519)
T 3qfa_A 341 EEQ------TNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKF 414 (519)
T ss_dssp TSB------CSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHH
T ss_pred CCc------cCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEEEECCCceEEecCCHHHHHhhC
Confidence 999 8999999999998 778999999999999999999865 44678899999999999999999999999864
Q ss_pred hhcCCeEEEEEEecccchhhhhcC-CCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 472 EKEGFEVSVAKTSFKANTKALAEN-EGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+ +..+++.+..|..+.++.... .++||+|||+|+..+++|||+|++|+++.++|+.++.+..
T Consensus 415 ~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~ 477 (519)
T 3qfa_A 415 G--EENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALK 477 (519)
T ss_dssp C--GGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred C--CCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 2 235666777888877776543 4689999999974379999999999999999998876544
No 21
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=8.2e-61 Score=505.83 Aligned_cols=405 Identities=24% Similarity=0.371 Sum_probs=348.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.+|||+|||||+||+++|..|++.|++|+|||+ +.+||+|.+.+|+|++.++..+...+.+..... ....+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~--------~~~~~ 74 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN--------VKIPL 74 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC--------SCCCC
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc--------CCCCc
Confidence 358999999999999999999999999999996 889999999999999999888877665533221 23457
Q ss_pred CHHHHHHHHHHHHHHHH--HHHHHHHHHcCeEEEeceEEEeCCcE--EEeCcceE--EEeCeEEEeCCCCCCCCCCccCC
Q 008850 179 DRQGVADHANNLATKIR--NNLTNSMKALGVDILTGVGTILGPQK--VKFGTDNI--VTAKDIIIATGSVPFVPKGIEVD 252 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~--v~~~~g~~--i~~d~lVlAtG~~p~~p~~~~~~ 252 (551)
++..+..+.....+ +. ..+...++..+++++.+++..++... |...++++ +.||+||||||+.|..|++++.+
T Consensus 75 ~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~ 153 (466)
T 3l8k_A 75 DFSTVQDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVE 153 (466)
T ss_dssp CHHHHHHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGG
T ss_pred CHHHHHHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCcc
Confidence 88888888877777 66 66777777889999999888776654 44456667 99999999999999998877765
Q ss_pred Cceeecchhhh----ccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCC-CHHHHHHHHHHHhCCCceE
Q 008850 253 GKTVITSDHAL----KLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGF-DPEIGKLAQRVLINPRKID 327 (551)
Q Consensus 253 ~~~v~~~~~~~----~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-~~~~~~~~~~~l~~~~gi~ 327 (551)
.+++++++. .+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+ ++++.+.+.+.++ |+
T Consensus 154 --~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~----v~ 227 (466)
T 3l8k_A 154 --YCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK----LN 227 (466)
T ss_dssp --GSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC----CC
T ss_pred --ceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE----EE
Confidence 478888888 666778999999999999999999999999999999999999998 9999999988873 88
Q ss_pred EEeceEEE---eCC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCC
Q 008850 328 YHTGVFAT---KDG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANG 402 (551)
Q Consensus 328 ~~~~~~~~---~~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~ 402 (551)
++++..+. .++ +.+.+++.+. +++..++++|.|++|+|++|+++ |.++..++.. ++| |.||+++|
T Consensus 228 i~~~~~v~~i~~~~~~~v~v~~~~~--~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd~~~~------ 297 (466)
T 3l8k_A 228 IKFNSPVTEVKKIKDDEYEVIYSTK--DGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVDETMK------ 297 (466)
T ss_dssp EECSCCEEEEEEEETTEEEEEECCT--TSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCCTTCB------
T ss_pred EEECCEEEEEEEcCCCcEEEEEEec--CCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeECCCcc------
Confidence 99887666 333 5566777620 11234799999999999999999 6668888887 678 99999999
Q ss_pred CCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCC---CccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEE
Q 008850 403 NLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGR---DHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVS 479 (551)
Q Consensus 403 t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~---~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~ 479 (551)
|+.|||||+|||++.+++++.|..||++||+||+|. ....++..+|+++|++|+++++|+||+||+++ |++++
T Consensus 298 t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~----g~~~~ 373 (466)
T 3l8k_A 298 TNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKM----GIEIV 373 (466)
T ss_dssp CSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHH----TCCEE
T ss_pred CCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhC----CCCEE
Confidence 899999999999999999999999999999999976 34567889999999999999999999999986 99999
Q ss_pred EEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 480 VAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
+.+++|..+.+++..++++||+||++|++ +++|||+|++|+.+.++|+.++.+.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~g~~k~i~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai 427 (466)
T 3l8k_A 374 EAEYNMEEDVSAQIYGQKEGVLKLIFERG-SMRLIGAWMIGVHSQYLINELGLAV 427 (466)
T ss_dssp EEEEEGGGSHHHHHHTCCCCEEEEEEETT-TCBEEEEEEESTTHHHHHHHHHHHH
T ss_pred EEEEEcccChhheecCCCeEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 99999999999999999999999999988 8999999999999999998876554
No 22
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.7e-60 Score=505.55 Aligned_cols=421 Identities=30% Similarity=0.496 Sum_probs=359.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccc-cccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQV-HAAG 177 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~ 177 (551)
.++||+|||||++|+++|..|++.|++|+|||+ +.+||+|.+.+|+|++.++.....++.+. ..+..+|++. ....
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~--~~~~~~gi~~~~~~~ 81 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMH--TEAQKRGIDVNGDIK 81 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHH--HTSGGGTEEECSCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHH--HHHHhcCcccCCCCc
Confidence 358999999999999999999999999999999 88999999999999999988776665543 1344556654 3445
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc--eE------EEeCeEEEeCCCCCCCCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD--NI------VTAKDIIIATGSVPFVPK 247 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g--~~------i~~d~lVlAtG~~p~~p~ 247 (551)
+++..+..+.....+.+...+...+++.+|+++.++..+.+.+.+.+ .+| .+ +.||+||+|||+.|..++
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~ 161 (478)
T 1v59_A 82 INVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFP 161 (478)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCC
Confidence 68888888888888888877778888899999999988776655443 444 46 999999999999986555
Q ss_pred CccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceE
Q 008850 248 GIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKID 327 (551)
Q Consensus 248 ~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~ 327 (551)
+.+..+..+++++++..+...+++++|||+|++|+|+|..|++.|.+||++++.+++++.+++++.+.+.+.+++ .||+
T Consensus 162 g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~gv~ 240 (478)
T 1v59_A 162 GIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKK-QGLD 240 (478)
T ss_dssp TCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHH-TTCE
T ss_pred CCCCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHH-CCCE
Confidence 444555568899998888778999999999999999999999999999999999999999999999999999987 8999
Q ss_pred EEeceEEE---e--CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCC
Q 008850 328 YHTGVFAT---K--DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDAN 401 (551)
Q Consensus 328 ~~~~~~~~---~--~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~ 401 (551)
++++..+. . +++.+.+++.+.. .++++++++|.|++|+|++||++.+.++..++.. ++|+|.||+++|
T Consensus 241 i~~~~~v~~i~~~~~~~~~~v~~~~~~-~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~----- 314 (478)
T 1v59_A 241 FKLSTKVISAKRNDDKNVVEIVVEDTK-TNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFN----- 314 (478)
T ss_dssp EECSEEEEEEEEETTTTEEEEEEEETT-TTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSB-----
T ss_pred EEeCCEEEEEEEecCCCeEEEEEEEcC-CCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCc-----
Confidence 99998877 3 4455667765310 1123679999999999999999855557788877 589999999999
Q ss_pred CCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEE
Q 008850 402 GNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVA 481 (551)
Q Consensus 402 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~ 481 (551)
|+.|+|||+|||++.+++++.|..||+++|+||+|.+.+++|..+|+++|++|+++++|+||+||++. |+++++.
T Consensus 315 -t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~----g~~~~~~ 389 (478)
T 1v59_A 315 -SKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEA----GIDYKIG 389 (478)
T ss_dssp -CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHT----TCCEEEE
T ss_pred -cCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCcEEEEECCHHHHHHc----CCCEEEE
Confidence 89999999999999889999999999999999998766678889999999999999999999999874 8999999
Q ss_pred EEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 482 KTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
..++..+.++...++++||+|++++++ +++|||+|++|+.+.++|+.++.+..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~~i~ 442 (478)
T 1v59_A 390 KFPFAANSRAKTNQDTEGFVKILIDSK-TERILGAHIIGPNAGEMIAEAGLALE 442 (478)
T ss_dssp EEEGGGCHHHHHTTCCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHHH
T ss_pred EEecccchhhhhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 999999999988788889999999987 79999999999999998888776543
No 23
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.5e-60 Score=506.12 Aligned_cols=410 Identities=26% Similarity=0.404 Sum_probs=342.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
++||+|||||+||+++|.+|++.|++|+|||+..+||+|.+.+|+|++.++..+.....+. ....+|+... ..+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~---~~~~~g~~~~-~~~~~ 77 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILE---NSRHYGFDTK-FSFNL 77 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHH---HGGGGTCCCC-CCCCH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHH---hhHhcCCccC-CccCH
Confidence 4899999999999999999999999999999988999999999999999887766554443 3445666544 56788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCc-------------ceEEEeCeEEEeCCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGT-------------DNIVTAKDIIIATGSVPFVPK 247 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~-------------g~~i~~d~lVlAtG~~p~~p~ 247 (551)
..+..+.......+...+...++..+|+++.+++..++.+.+.+.+ +.++.||+||||||+.|..|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~ 157 (500)
T 1onf_A 78 PLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPP 157 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCC
Confidence 8888888777777777777788889999999987666666666543 567999999999999999887
Q ss_pred CccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceE
Q 008850 248 GIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKID 327 (551)
Q Consensus 248 ~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~ 327 (551)
+++.+ .+++++++..+.. +++++|||+|++|+|+|..|++.|.+|+++++.+++++.+|+++.+.+.+.+++ .||+
T Consensus 158 i~G~~--~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~-~gv~ 233 (500)
T 1onf_A 158 VKGIE--NTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKK-NNIN 233 (500)
T ss_dssp CTTGG--GCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHH-TTCE
T ss_pred CCCCC--cccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHh-CCCE
Confidence 66542 3677888877776 999999999999999999999999999999999999999999999999999987 8999
Q ss_pred EEeceEEE---eCC-CcEEEEEecccCCCCCeE-EecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCC
Q 008850 328 YHTGVFAT---KDG-KPVTIELIDAKTKEPKDT-LEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANG 402 (551)
Q Consensus 328 ~~~~~~~~---~~~-~~~~v~~~~g~~~~~~~~-i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~ 402 (551)
++++..+. .++ +.+.+++.++ ++ +++|.|++|+|++|+++.|.++..++..++|+|.||+++|
T Consensus 234 i~~~~~v~~i~~~~~~~~~v~~~~g------~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~~~------ 301 (500)
T 1onf_A 234 IVTFADVVEIKKVSDKNLSIHLSDG------RIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDENQR------ 301 (500)
T ss_dssp EECSCCEEEEEESSTTCEEEEETTS------CEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTTCB------
T ss_pred EEECCEEEEEEEcCCceEEEEECCC------cEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCCcc------
Confidence 99998776 222 3367777655 45 9999999999999999866567778777889999999999
Q ss_pred CCCCcEEEecCCC----------------------------------CCCCcHHHHHHHHHHHHHHHcCCC-ccCCCCCc
Q 008850 403 NLVPHLYCIGDAN----------------------------------GKMMLAHAASAQGISVVEQVTGRD-HVLNHLSI 447 (551)
Q Consensus 403 t~~~~IyA~GD~~----------------------------------~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~ 447 (551)
|+.|+|||+|||+ +.+++++.|.+||+++|+||+|.. ...+|..+
T Consensus 302 t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~ 381 (500)
T 1onf_A 302 TSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLI 381 (500)
T ss_dssp CSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSC
T ss_pred cCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCC
Confidence 8999999999998 556799999999999999999854 45678889
Q ss_pred ceEEEcCCCeeEecCCHHHHHhhchhcC-CeEEEEEEecccchhhh----hcCCCceEEEEEEeCCCCCCcceeeeeCCC
Q 008850 448 PAACFTHPEISMVGLTEPQAREKAEKEG-FEVSVAKTSFKANTKAL----AENEGEGLAKGVPRNFASSERTNQHSDRPS 522 (551)
Q Consensus 448 p~~~~~~~~~~~vG~~e~~a~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~kli~~~~~~~~~lg~~~~g~~ 522 (551)
|+++|++|+++++|++|++|++++ | +++++.+.+|..+.++. ..+.+++|+||++|++ +++|||+|++|+.
T Consensus 382 p~~~~~~~~~a~vGl~e~~a~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~-~~~ilG~~~~g~~ 457 (500)
T 1onf_A 382 PTVIFSHPPIGTIGLSEEAAIQIY---GKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGK-DELIKGLHIIGLN 457 (500)
T ss_dssp CEEECCSSCEEEEECCHHHHHHHT---CGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETT-TTEEEEEEEESTT
T ss_pred CeEEEcCcceEEEeCCHHHHHhcC---CCccEEEEEEECchhhhhhccccccCCCceEEEEEEECC-CCEEEEEEEECCC
Confidence 999999999999999999998752 3 67888888999999987 5667889999999987 8999999999999
Q ss_pred hhHHHHHHHHHh
Q 008850 523 KPNLVKKLADVY 534 (551)
Q Consensus 523 ~~~~i~~l~~~~ 534 (551)
+.++|+.++...
T Consensus 458 a~~~i~~~~~ai 469 (500)
T 1onf_A 458 ADEIVQGFAVAL 469 (500)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999986643
No 24
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.6e-60 Score=500.71 Aligned_cols=413 Identities=30% Similarity=0.508 Sum_probs=358.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhh---cCcccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKA---LGLQVHAA 176 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~ 176 (551)
.++||+|||||+||++||.+|++.|++|+|||++.+||+|.+.+|+|+|.++..+..++.+. .+.. +|++....
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~---~~~~~~~~g~~~~~~ 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQAS---RFTEPSPLGISVASP 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHH---HTTSCCTTCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHh---hcccccccCcccCCC
Confidence 35899999999999999999999999999999999999999999999999887776665543 2333 67766566
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCcee
Q 008850 177 GYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTV 256 (551)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v 256 (551)
.+++..+..+.....+.+...+...+++.+|+++.+++.+.+.+.|.+++ .++.||+||||||++|+.|++.+.++ .+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~~~-~v 158 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSVELPMLPLGG-PV 158 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEECCBTTBCCBT-TE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCccC-cE
Confidence 78999999998888888887788888889999999998888888888876 78999999999999998776333433 57
Q ss_pred ecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE-
Q 008850 257 ITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT- 335 (551)
Q Consensus 257 ~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~- 335 (551)
+++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+.
T Consensus 159 ~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~gv~i~~~~~v~~ 237 (458)
T 1lvl_A 159 ISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKK-LGIALHLGHSVEG 237 (458)
T ss_dssp ECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-HTCEEETTCEEEE
T ss_pred ecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHH-CCCEEEECCEEEE
Confidence 888888888778999999999999999999999999999999999999999999999999999986 899999998887
Q ss_pred eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEecCC
Q 008850 336 KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCIGDA 414 (551)
Q Consensus 336 ~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~ 414 (551)
.+.+. +.+.. .+++.+++++|.|++|+|++|+++++.++..++.. ++ +|.||+++| |+.|+|||+|||
T Consensus 238 i~~~~--v~v~~--~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~------t~~~~Iya~GD~ 306 (458)
T 1lvl_A 238 YENGC--LLAND--GKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQ------TSMHNVWAIGDV 306 (458)
T ss_dssp EETTE--EEEEC--SSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCB------CSSTTEEECGGG
T ss_pred EEeCC--EEEEE--CCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCc------CCCCCEEEeecc
Confidence 32233 33331 11222579999999999999999876667778776 45 899999999 899999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchhhhhc
Q 008850 415 NGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAE 494 (551)
Q Consensus 415 ~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (551)
++.+++++.|..||+++|+||+|...++++..+|+++|++|+++++|++|++|++. |+++++...++..+.++...
T Consensus 307 ~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~----g~~~~~~~~~~~~~~~~~~~ 382 (458)
T 1lvl_A 307 AGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQ----GLDCIVAQFPFAANGRAMSL 382 (458)
T ss_dssp GCSSCCHHHHHHHHHHHHHHHTTCCCCCCCSCCCEEECSSSEEEEEECCHHHHHHT----TCCEEEEEEEGGGCHHHHHT
T ss_pred CCCcccHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHHc----CCCEEEEEEECccchhhhhc
Confidence 99999999999999999999999777778889999999999999999999999875 89999999999999999888
Q ss_pred CCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 495 NEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 495 ~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
++++||+||++|++ +++|||++++|+.+.++|+.++.+.
T Consensus 383 ~~~~g~~kl~~d~~-~~~ilG~~~vg~~a~e~i~~~~~ai 421 (458)
T 1lvl_A 383 ESKSGFVRVVARRD-NHLILGWQAVGVAVSELSTAFAQSL 421 (458)
T ss_dssp TCCCCEEEEEEETT-TCBEEEEEEEETTGGGHHHHHHHHH
T ss_pred CCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 88899999999987 7999999999999999998886544
No 25
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-60 Score=500.61 Aligned_cols=413 Identities=25% Similarity=0.411 Sum_probs=352.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccc-----c
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQV-----H 174 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~ 174 (551)
.++||+|||||++|+++|..|++.|++|+|||++.+||+|.+.+|+|++.++..+.....+. ....+++.. .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~---~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVS---HANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHT---TTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHH---hHHhcCccccccccc
Confidence 45899999999999999999999999999999988999999999999999887766544443 234455543 2
Q ss_pred -ccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccce--EEEeCeEEEeCCCCCCCC-CC
Q 008850 175 -AAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTDN--IVTAKDIIIATGSVPFVP-KG 248 (551)
Q Consensus 175 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g~--~i~~d~lVlAtG~~p~~p-~~ 248 (551)
...+++..+..+.....+.+...+...++..+++++.+++..++.+.+.+ .++. ++.||+||||||+.|..| ++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i 166 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENI 166 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTS
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCC
Confidence 34578888888888888888888888888899999999888777655444 4555 799999999999999988 76
Q ss_pred ccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEE
Q 008850 249 IEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDY 328 (551)
Q Consensus 249 ~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~ 328 (551)
++.+ .+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||++
T Consensus 167 ~g~~--~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~-~Gv~i 243 (479)
T 2hqm_A 167 PGFE--LGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVK-EGINV 243 (479)
T ss_dssp TTGG--GSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHH-HTCEE
T ss_pred CCcc--cccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHh-CCeEE
Confidence 6542 35778888888888999999999999999999999999999999999999999999999999999987 89999
Q ss_pred EeceEEE---eCCC--cEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCC
Q 008850 329 HTGVFAT---KDGK--PVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANG 402 (551)
Q Consensus 329 ~~~~~~~---~~~~--~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~ 402 (551)
+++..+. .+++ .+.+++.+| + +++++|.|++|+|++||+ .|.++..++.. ++|+|.||+++|
T Consensus 244 ~~~~~v~~i~~~~~~~~~~v~~~~G----~-~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd~~~~------ 311 (479)
T 2hqm_A 244 HKLSKIVKVEKNVETDKLKIHMNDS----K-SIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIADEYQN------ 311 (479)
T ss_dssp ECSCCEEEEEECC-CCCEEEEETTS----C-EEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCCTTCB------
T ss_pred EeCCEEEEEEEcCCCcEEEEEECCC----c-EEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeECCCCc------
Confidence 9998776 2222 366777553 1 579999999999999999 45557778877 689999999999
Q ss_pred CCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCC----ccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcC-Ce
Q 008850 403 NLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRD----HVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEG-FE 477 (551)
Q Consensus 403 t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~----~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~-~~ 477 (551)
|+.|+|||+|||++.+.+++.|.+||+++|+||+|.. ...+|..+|+++|++|+++++|++|++|++++ + .+
T Consensus 312 t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~---~~~~ 388 (479)
T 2hqm_A 312 TNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKY---GKEN 388 (479)
T ss_dssp CSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHH---CGGG
T ss_pred cCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcC---CCCc
Confidence 8999999999999888999999999999999999854 34567789999999999999999999998753 3 34
Q ss_pred EEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 478 VSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
+++.+.+|..+.+++..+++++|+||++|++ +++|||+|++|+.+.++|+.++.+.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai 444 (479)
T 2hqm_A 389 IKVYNSKFTAMYYAMLSEKSPTRYKIVCAGP-NEKVVGLHIVGDSSAEILQGFGVAI 444 (479)
T ss_dssp EEEEEEEECCGGGGGCSSCCCEEEEEEEETT-TTEEEEEEEESTTHHHHHHHHHHHH
T ss_pred EEEEEEeccHHHHHhhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 7888899999999988888899999999987 8999999999999999999886543
No 26
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=9.2e-60 Score=500.25 Aligned_cols=421 Identities=26% Similarity=0.377 Sum_probs=353.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC---C-------ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG---D-------VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKAL 169 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~---~-------~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 169 (551)
.+|||+||||||||++||.+|++.|++|+|||+ . .+||+|.+++|+|++.++..+...+.+ .+...+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~---~~~~~~ 84 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAV---HEAAAY 84 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHH---HHHHHT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHH---HHHHhc
Confidence 459999999999999999999999999999993 1 389999999999999998877655544 345567
Q ss_pred Cccccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc-eEEEeCeEEEeCCCCCCC
Q 008850 170 GLQVHA-AGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD-NIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 170 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g-~~i~~d~lVlAtG~~p~~ 245 (551)
|+.... ..+++..+..+.....+.+...+...++..+|+++.+.+.+.+.+.+.+ .++ .++.||+||||||+.|..
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~ 164 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRY 164 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCC
Confidence 776543 4679999999998888888877777888899999999998888766655 344 479999999999999998
Q ss_pred CCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCc
Q 008850 246 PKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRK 325 (551)
Q Consensus 246 p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~g 325 (551)
|++++.+ ...+++++++.+...+++++|||+|++|+|+|..|++.|.+|+++++ +.+++.+++++.+.+.+.+++ .|
T Consensus 165 p~i~G~~-~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~-~G 241 (483)
T 3dgh_A 165 PDIPGAV-EYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEE-RG 241 (483)
T ss_dssp CSSTTHH-HHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHH-TT
T ss_pred CCCCCcc-cccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHh-CC
Confidence 8766643 23568888888888899999999999999999999999999999998 578899999999999999987 89
Q ss_pred eEEEeceEEE---e-CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCC
Q 008850 326 IDYHTGVFAT---K-DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDAN 401 (551)
Q Consensus 326 i~~~~~~~~~---~-~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~ 401 (551)
|+++++..+. . +++.+.+++.++.. ++..++++|.|++|+|++|+++.+.++..++..+.|+|.||+++|
T Consensus 242 v~i~~~~~v~~i~~~~~~~~~v~~~~~~~-~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd~~~~----- 315 (483)
T 3dgh_A 242 IPFLRKTVPLSVEKQDDGKLLVKYKNVET-GEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVDSQEA----- 315 (483)
T ss_dssp CCEEETEEEEEEEECTTSCEEEEEEETTT-CCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCCTTCB-----
T ss_pred CEEEeCCEEEEEEEcCCCcEEEEEecCCC-CceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEECcCCc-----
Confidence 9999998776 2 23346788777532 223479999999999999999988778888887559999999999
Q ss_pred CCCCCcEEEecCCC-CCCCcHHHHHHHHHHHHHHHcCCCc-cCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEE
Q 008850 402 GNLVPHLYCIGDAN-GKMMLAHAASAQGISVVEQVTGRDH-VLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVS 479 (551)
Q Consensus 402 ~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~ 479 (551)
|+.|||||+|||+ +.+++++.|..||+++|+||+|... ..+|..+|+++|++|+++++|+||+||+++++. ..++
T Consensus 316 -t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~--~~~~ 392 (483)
T 3dgh_A 316 -TNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGA--DEIE 392 (483)
T ss_dssp -CSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCG--GGEE
T ss_pred -cCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCC--CCEE
Confidence 8999999999997 6689999999999999999998653 467889999999999999999999999986321 3466
Q ss_pred EEEEecccchhhhhc-CCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 480 VAKTSFKANTKALAE-NEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 480 ~~~~~~~~~~~~~~~-~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
+.+..|..+.+++.. +.++||+|||+|++.+++|||+|++|+++.++|+.++.+..
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~ 449 (483)
T 3dgh_A 393 VFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALK 449 (483)
T ss_dssp EEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHH
T ss_pred EEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 667777776655432 45689999999975479999999999999999999876543
No 27
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=9.5e-60 Score=500.59 Aligned_cols=420 Identities=24% Similarity=0.334 Sum_probs=353.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC---------CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG---------DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALG 170 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~---------~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g 170 (551)
.+|||+||||||||++||..|++.|++|+|||+ ..+||+|.+++|+|++.++......+.+ .....+|
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~---~~~~~~g 81 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMI---RDAHHYG 81 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHH---HHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHH---HHHHhcC
Confidence 459999999999999999999999999999995 4689999999999999988777655544 3456677
Q ss_pred cccc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc--eEEEeCeEEEeCCCCCCC
Q 008850 171 LQVH-AAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD--NIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 171 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g--~~i~~d~lVlAtG~~p~~ 245 (551)
+... ...+++..+..+.+...+.+...+...++..+|+++.+.+.+.+.+.+.+ .++ .++.||+||||||+.|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCC
Confidence 7754 35689999999999888888888888888899999999999988876655 334 579999999999999998
Q ss_pred CC-CccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCC
Q 008850 246 PK-GIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPR 324 (551)
Q Consensus 246 p~-~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~ 324 (551)
|+ +++.. ..++++++++.+...+++++|||+|++|+|+|..|++.|.+|+++++. .+++.+|+++.+.+.+.+++ .
T Consensus 162 p~~i~G~~-~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~-~ 238 (488)
T 3dgz_A 162 PTQVKGAL-EYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMES-H 238 (488)
T ss_dssp CSSCBTHH-HHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHH-T
T ss_pred CCCCCCcc-cccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-cccccCCHHHHHHHHHHHHH-C
Confidence 87 66643 235688888888888999999999999999999999999999999986 57888999999999999987 8
Q ss_pred ceEEEeceEEE---e-CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc--CCCceeeCCCCccc
Q 008850 325 KIDYHTGVFAT---K-DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT--QRGFVPVDERMRVI 398 (551)
Q Consensus 325 gi~~~~~~~~~---~-~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~--~~G~i~Vd~~~~~~ 398 (551)
||+++++..+. . +++.+.+++.+... ++..++++|.|++|+|++|+++.++++..++.. ++|+|.||+++|
T Consensus 239 gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~-g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~-- 315 (488)
T 3dgz_A 239 GTQFLKGCVPSHIKKLPTNQLQVTWEDHAS-GKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEA-- 315 (488)
T ss_dssp TCEEEETEEEEEEEECTTSCEEEEEEETTT-TEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSB--
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEeCCC-CeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCc--
Confidence 99999998766 2 34556677765311 112358999999999999999988778888876 479999999999
Q ss_pred cCCCCCCCcEEEecCCC-CCCCcHHHHHHHHHHHHHHHcCCCc-cCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCC
Q 008850 399 DANGNLVPHLYCIGDAN-GKMMLAHAASAQGISVVEQVTGRDH-VLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGF 476 (551)
Q Consensus 399 ~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~ 476 (551)
|++|||||+|||+ +.+++++.|..||+++|+||+|... ..++..+|+++|++|+++++|+||+||+++++ ..
T Consensus 316 ----t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~--~~ 389 (488)
T 3dgz_A 316 ----TSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHG--QE 389 (488)
T ss_dssp ----CSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHC--GG
T ss_pred ----cCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCC--CC
Confidence 8999999999997 6788999999999999999998654 46788999999999999999999999997632 13
Q ss_pred eEEEEEEecccchhhhhcC-CCceEEEEEEeC-CCCCCcceeeeeCCChhHHHHHHHHHhh
Q 008850 477 EVSVAKTSFKANTKALAEN-EGEGLAKGVPRN-FASSERTNQHSDRPSKPNLVKKLADVYM 535 (551)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~-~~~~~~kli~~~-~~~~~~lg~~~~g~~~~~~i~~l~~~~~ 535 (551)
.+++.+..|..+.++.... .++||+||++|+ + +++|||+|++|+++.++|+.++.+..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai~ 449 (488)
T 3dgz_A 390 HVEVYHAYYKPLEFTVADRDASQCYIKMVCMREP-PQLVLGLHFLGPNAGEVTQGFALGIK 449 (488)
T ss_dssp GEEEEEEECCCHHHHHTTCCCTTCEEEEEEESST-TCBEEEEEEEETTHHHHHHHHHHHHH
T ss_pred cEEEEEccccchhhhhhccCCCcEEEEEEEecCC-CCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 5677777787777665443 378999999994 6 89999999999999999999876543
No 28
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.5e-59 Score=494.96 Aligned_cols=411 Identities=36% Similarity=0.578 Sum_probs=359.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
|||+||||||||+++|..|++.|++|+|||+ +.+||+|.+.+|+|+|.++.....++.+.. ..+|++.....+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~----~~~g~~~~~~~~~~ 77 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK----GLLGAKVKGVELDL 77 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH----CCTTEEECCEEECH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh----hcCCcccCCCccCH
Confidence 7999999999999999999999999999999 489999999999999999887766655432 45666654456788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeC-cceEEEeCeEEEeCCCCCCCCCCccCCCceeecc
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFG-TDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITS 259 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~-~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v~~~ 259 (551)
..+..+...+.+.+...+...+++.+++++.+++.+.+.+.+.+. ++.++.||+||||||+.|..|++++.+...++++
T Consensus 78 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~ 157 (455)
T 2yqu_A 78 PALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTS 157 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEech
Confidence 888888888877777777778888899999999888877777664 4578999999999999999888777665568888
Q ss_pred hhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE---e
Q 008850 260 DHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT---K 336 (551)
Q Consensus 260 ~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~---~ 336 (551)
+++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++ .||+++++..+. .
T Consensus 158 ~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~-~Gv~i~~~~~V~~i~~ 236 (455)
T 2yqu_A 158 TEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKK-QGLTIRTGVRVTAVVP 236 (455)
T ss_dssp HHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHH-HTCEEECSCCEEEEEE
T ss_pred HHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHH-CCCEEEECCEEEEEEE
Confidence 888888778999999999999999999999999999999999999999999999999999987 899999998776 3
Q ss_pred CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEecCCC
Q 008850 337 DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCIGDAN 415 (551)
Q Consensus 337 ~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~ 415 (551)
+++.+.+++.++ +++++|.|++|+|++|+++.+.++..++.. ++|+|.||+++| |+.|+|||+|||+
T Consensus 237 ~~~~v~v~~~~g------~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~------t~~~~iya~GD~~ 304 (455)
T 2yqu_A 237 EAKGARVELEGG------EVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLR------TRVPHIYAIGDVV 304 (455)
T ss_dssp ETTEEEEEETTS------CEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSB------CSSTTEEECGGGS
T ss_pred eCCEEEEEECCC------eEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcc------cCCCCEEEEecCC
Confidence 344556666443 679999999999999999876667778776 578999999999 8999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchhhhhcC
Q 008850 416 GKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAEN 495 (551)
Q Consensus 416 ~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (551)
+.+++++.|..||+++|+||+|....+++..+|++.|++|+++++|++|+++++. |+++++...++..+.++...+
T Consensus 305 ~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~----g~~~~~~~~~~~~~~~~~~~~ 380 (455)
T 2yqu_A 305 RGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQ----GIPYKVGKFPYSASGRARAMG 380 (455)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHSCCCCCGGGCCEEECSSSEEEEEECCHHHHHHH----TCCEEEEEEEGGGCHHHHHHT
T ss_pred CCccCHHHHHHhHHHHHHHHcCCCccCCCCCCCEEEEcCCceEEEECCHHHHHHc----CCCEEEEEEEcccchHHHhcC
Confidence 9999999999999999999998776777888899999999999999999999875 999999999999999998888
Q ss_pred CCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 496 EGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 496 ~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
++++|+|+++|++ +++|||++++|+.+.++|+.++...
T Consensus 381 ~~~~~~k~~~~~~-~~~ilG~~~~g~~a~~~i~~~~~ai 418 (455)
T 2yqu_A 381 ETEGFIKVLAHAK-TDRILGVHGIGARVGDVLAEAALAL 418 (455)
T ss_dssp CCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHH
T ss_pred CCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 8899999999987 7899999999999999888876543
No 29
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=3.2e-59 Score=494.12 Aligned_cols=412 Identities=26% Similarity=0.408 Sum_probs=347.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhc-Ccccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKAL-GLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 178 (551)
.++||+|||||++|+++|.+|++.|++|+|||++.+||+|.+.+|+|++.++..+........ ...+ |++......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~---~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRE---SPFDGGIAATVPTI 79 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHC---CTTTTTSCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhh---hhhcCCccCCCCcc
Confidence 458999999999999999999999999999999999999999999999988876654433221 1222 444444456
Q ss_pred CHHHHHHHHHHHHHHHHH-HHHHHHHHc-CeEEEeceEEEeCCcEEE--eCcc--eEEEeCeEEEeCCCCCCCCCCccCC
Q 008850 179 DRQGVADHANNLATKIRN-NLTNSMKAL-GVDILTGVGTILGPQKVK--FGTD--NIVTAKDIIIATGSVPFVPKGIEVD 252 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~~~~~v~--~~~g--~~i~~d~lVlAtG~~p~~p~~~~~~ 252 (551)
++..+..+.....+.+.. .+...+++. +++++.+++.+++.+.+. +.++ .++.||+||||||+.|+.|++++.+
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~ 159 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLK 159 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTT
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCC
Confidence 777777766666555543 234556666 999999988777765544 4456 6799999999999999999887776
Q ss_pred CceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEece
Q 008850 253 GKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGV 332 (551)
Q Consensus 253 ~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~ 332 (551)
...+++++++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ +++++.+.+.+.+++ .||+++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~-~Gv~i~~~~ 237 (467)
T 1zk7_A 160 ESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRA-EGIEVLEHT 237 (467)
T ss_dssp TSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHH-TTCEEETTC
T ss_pred cCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHHHHHHHHHHHh-CCCEEEcCC
Confidence 666788888888888899999999999999999999999999999999999999 999999999999987 899999998
Q ss_pred EEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcE
Q 008850 333 FAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHL 408 (551)
Q Consensus 333 ~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~I 408 (551)
.+. .+++...+++.+ .++++|.|++|+|++|+++.+.++..++.. ++|+|.||+++| |+.|+|
T Consensus 238 ~v~~i~~~~~~~~v~~~~-------~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~------t~~~~i 304 (467)
T 1zk7_A 238 QASQVAHMDGEFVLTTTH-------GELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMR------TSNPNI 304 (467)
T ss_dssp CEEEEEEETTEEEEEETT-------EEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCB------CSSTTE
T ss_pred EEEEEEEeCCEEEEEECC-------cEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcc------cCCCCE
Confidence 776 334444555432 579999999999999999876667778876 578999999999 899999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccc
Q 008850 409 YCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKAN 488 (551)
Q Consensus 409 yA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~ 488 (551)
||+|||++.+.+++.|..||+++|.||++.+..+++..+|+++|++|+++++|++|++|++. |+++++.+.++..+
T Consensus 305 ya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~----g~~~~~~~~~~~~~ 380 (467)
T 1zk7_A 305 YAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHD----GIETDSRTLTLDNV 380 (467)
T ss_dssp EECSTTBSSCCCHHHHHHHHHHHHHHHTTCCCCCCCTTCEEEECSSSEEEEEECCHHHHHHT----TCCEEEEEEEGGGC
T ss_pred EEEeccCCCcccHHHHHHHHHHHHHHHcCCCcccCCCCCCEEEecCCceEEEecCHHHHHhc----CCCeEEEEEecccc
Confidence 99999999999999999999999999998766677888999999999999999999999874 89999999999999
Q ss_pred hhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 489 TKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 489 ~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
.+++..+++++|+|++++++ +++|||+|++|+.+.++|+.++.+.
T Consensus 381 ~~~~~~~~~~~~~kl~~~~~-~~~ilG~~~~g~~a~~~i~~~~~~i 425 (467)
T 1zk7_A 381 PRALANFDTRGFIKLVIEEG-SHRLIGVQAVAPEAGELIQTAALAI 425 (467)
T ss_dssp HHHHHTTCCCCEEEEEEETT-TCBEEEEEEEETTHHHHHHHHHHHH
T ss_pred hhhhhcCCCcEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 99988888899999999987 7999999999999999887665543
No 30
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=7.2e-59 Score=497.25 Aligned_cols=405 Identities=20% Similarity=0.284 Sum_probs=339.0
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCc-cccc-
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGL-QVHA- 175 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~- 175 (551)
..++||+|||||++|+++|.+|++.|++|+|||++. +||+|.+.+|+|++.++.....+..+.. ...+|+ +...
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~---~~~~g~~~~~~~ 117 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLART---FSGQYWFPDMTE 117 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHH---TTTSTTCCCCTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhh---hhhcCcHHHHHh
Confidence 345899999999999999999999999999999955 9999999999999998877766554432 233443 1000
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHH---HHH-----HHcCeEEE-eceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 176 AGYDRQGVADHANNLATKIRNNLT---NSM-----KALGVDIL-TGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~v~~~-~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
..+....+..+ +...+. ..+ +..+++++ .+.+.+++.+.+.+. +.++.||+||||||+.|..|
T Consensus 118 ~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~~p 189 (523)
T 1mo9_A 118 KVVGIKEVVDL-------FRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPGTL 189 (523)
T ss_dssp CCCCHHHHHHH-------HHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECCCC
T ss_pred hhhhHHHHHHH-------HHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCCCC
Confidence 00113333322 222222 344 66799999 888888888888876 67899999999999999999
Q ss_pred CCccCCCceeecchhhh-ccccCC-ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCC
Q 008850 247 KGIEVDGKTVITSDHAL-KLEFVP-DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPR 324 (551)
Q Consensus 247 ~~~~~~~~~v~~~~~~~-~~~~~~-k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~ 324 (551)
++++.+...+++++++. .+...+ ++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++ .
T Consensus 190 ~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~-~ 268 (523)
T 1mo9_A 190 DVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKE-Q 268 (523)
T ss_dssp CSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHH-T
T ss_pred CCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHh-C
Confidence 87776665688888888 777777 99999999999999999999999999999999999999999999999999987 8
Q ss_pred ceEEEeceEEE---eCCCc----EEEEEecccCCCCCe-EEecCEEEEeecCCCCCC-CCCCccccccc-CCCceeeCCC
Q 008850 325 KIDYHTGVFAT---KDGKP----VTIELIDAKTKEPKD-TLEVDAALIATGRAPFTN-GLGLENINVVT-QRGFVPVDER 394 (551)
Q Consensus 325 gi~~~~~~~~~---~~~~~----~~v~~~~g~~~~~~~-~i~~D~vi~a~G~~p~~~-~l~l~~~~l~~-~~G~i~Vd~~ 394 (551)
||+++++..+. .+++. +.+++.+| + ++++|.|++|+|++|+++ ++ +..++.. ++|+|.||++
T Consensus 269 GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G------~~~i~aD~Vv~A~G~~p~~~~~l--~~~gl~~~~~G~i~Vd~~ 340 (523)
T 1mo9_A 269 GMEIISGSNVTRIEEDANGRVQAVVAMTPNG------EMRIETDFVFLGLGEQPRSAELA--KILGLDLGPKGEVLVNEY 340 (523)
T ss_dssp TCEEESSCEEEEEEECTTSBEEEEEEEETTE------EEEEECSCEEECCCCEECCHHHH--HHHTCCBCTTSCBCCCTT
T ss_pred CcEEEECCEEEEEEEcCCCceEEEEEEECCC------cEEEEcCEEEECcCCccCCccCH--HHcCCccCCCCCEEECCC
Confidence 99999998877 32233 56666554 4 799999999999999987 34 5667776 6899999999
Q ss_pred CccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcCCCeeEecCCHHHHHhhchhc
Q 008850 395 MRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKE 474 (551)
Q Consensus 395 ~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~~~ 474 (551)
+| |+.|+|||+|||++.+++++.|..||++||+||+|.+.++++..+|+++|++|+++++|+||++|++.
T Consensus 341 ~~------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~---- 410 (523)
T 1mo9_A 341 LQ------TSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAA---- 410 (523)
T ss_dssp SB------CSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSEEEEEECCHHHHHHT----
T ss_pred Cc------cCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCCHHHHHhC----
Confidence 99 89999999999999889999999999999999999776777888999999999999999999999875
Q ss_pred CCeEEEEEEeccc--------------chhhhhc--CCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 475 GFEVSVAKTSFKA--------------NTKALAE--NEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 475 ~~~~~~~~~~~~~--------------~~~~~~~--~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
|+++++.++++.. +.++.+. ++++||+||++|++ +++|||+|++|+.+.++|+.++.+.
T Consensus 411 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai 485 (523)
T 1mo9_A 411 GHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAK-TRKVLGAHHVGYGAKDAFQYLNVLI 485 (523)
T ss_dssp TCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETT-TCBEEEEEEEESSCHHHHHHHHHHH
T ss_pred CCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECC-CCEEEEEEEECCCHHHHHHHHHHHH
Confidence 8999999999988 8888887 77889999999987 7999999999999999998887654
No 31
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=1.2e-54 Score=472.84 Aligned_cols=416 Identities=25% Similarity=0.372 Sum_probs=341.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC--C-------ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG--D-------VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALG 170 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~--~-------~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g 170 (551)
..+||+||||||||++||..|++.|++|+|||+ + .+||+|.+.+|+|++.++..+.....+ .....+|
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~---~~~~~~g 182 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHAL---EDAEHFG 182 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHH---HHHHHTT
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHH---hhHHhCC
Confidence 458999999999999999999999999999996 2 389999999999999887765544333 3345567
Q ss_pred ccccc--cccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEe--Ccc--eEEEeCeEEEeCCCCCC
Q 008850 171 LQVHA--AGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF--GTD--NIVTAKDIIIATGSVPF 244 (551)
Q Consensus 171 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~--~~g--~~i~~d~lVlAtG~~p~ 244 (551)
+.... ...++..+.+++...++.+...+...+...+|+++.+.+.+++.+.+.+ .+| .++.||+||||||+.|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~ 262 (598)
T 2x8g_A 183 WSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPK 262 (598)
T ss_dssp CCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEEC
T ss_pred ccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCC
Confidence 65432 3578899999988888887766666777889999999988888777665 334 47999999999999999
Q ss_pred CCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCC
Q 008850 245 VPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPR 324 (551)
Q Consensus 245 ~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~ 324 (551)
.|++++... ..++++++..+...+++++|||+|++|+|+|..|++.|.+||++++. .+++.+++++.+.+.+.+++ .
T Consensus 263 ~p~i~G~~~-~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~-~ 339 (598)
T 2x8g_A 263 YPEIPGAVE-YGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRGFDQQMAEKVGDYMEN-H 339 (598)
T ss_dssp CCSSTTHHH-HCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHH-T
T ss_pred CCCCCCccc-ceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCcCCHHHHHHHHHHHHh-C
Confidence 887665422 34567777777778899999999999999999999999999999988 78888999999999999886 8
Q ss_pred ceEEEeceEEE----e-----CC---CcEEEEE--ecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCce
Q 008850 325 KIDYHTGVFAT----K-----DG---KPVTIEL--IDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFV 389 (551)
Q Consensus 325 gi~~~~~~~~~----~-----~~---~~~~v~~--~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i 389 (551)
||+++++..+. . ++ +.+.+++ .++ +...+++|.|++|+|++||++++.++..++.. ++|+|
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g----~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i 415 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDG----KKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRV 415 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTS----CEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCB
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCC----cEEeccCCEEEEEeCCccccCccCchhcCceECCCCcE
Confidence 99999997554 1 22 3333443 232 12345699999999999999877667778876 67999
Q ss_pred eeCCCCccccCCCCCCCcEEEecCC-CCCCCcHHHHHHHHHHHHHHHcCCC-ccCCCCCcceEEEcCCCeeEecCCHHHH
Q 008850 390 PVDERMRVIDANGNLVPHLYCIGDA-NGKMMLAHAASAQGISVVEQVTGRD-HVLNHLSIPAACFTHPEISMVGLTEPQA 467 (551)
Q Consensus 390 ~Vd~~~~~~~~~~t~~~~IyA~GD~-~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~~~vG~~e~~a 467 (551)
.||+++| |+.|||||+||| .+.+.+++.|..||+++|+||++.. ...+|..+|+++|++|+++++|+||++|
T Consensus 416 ~vd~~~~------ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a 489 (598)
T 2x8g_A 416 VCTDDEQ------TTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDA 489 (598)
T ss_dssp CCCTTSB------CSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEECSSSCEEEEECCHHHH
T ss_pred EeCCCCc------CCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEECCCceEEEeCCHHHH
Confidence 9999999 899999999999 5667899999999999999999754 4467889999999999999999999999
Q ss_pred HhhchhcC-CeEEEEEEecccchhhhhcCC-CceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 468 REKAEKEG-FEVSVAKTSFKANTKALAENE-GEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 468 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
++.+ + .++++.+.+|..+.++...+. .++|+||++++..+++|||+|++|+++.++|+.++.+.
T Consensus 490 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai 555 (598)
T 2x8g_A 490 IEKY---GDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAI 555 (598)
T ss_dssp HHHH---CGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHH
T ss_pred HhhC---CCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 8753 3 347778888998888887644 67999999995337999999999999999999887654
No 32
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.3e-52 Score=436.75 Aligned_cols=369 Identities=17% Similarity=0.192 Sum_probs=278.6
Q ss_pred cEEEECCChHHHHHHHHHHHcC--CcEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 103 DLIIIGAGVGGHGAALHAVEKG--LKTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~g--~~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
+||||||||||++||.+|+++| .+|+|||++. .++ ...|+|... .... ......+.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~---~~~~l~~~~-----------------~~~~-~~~~~~~~ 60 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF---ANCALPYVI-----------------GEVV-EDRRYALA 60 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB---CGGGHHHHH-----------------TTSS-CCGGGTBC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC---CcchhHHHH-----------------cCCc-cchhhhhh
Confidence 7999999999999999999988 5799999943 221 112233100 0000 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC--CcEEEe-----CcceEEEeCeEEEeCCCCCCCCCCccC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG--PQKVKF-----GTDNIVTAKDIIIATGSVPFVPKGIEV 251 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~~-----~~g~~i~~d~lVlAtG~~p~~p~~~~~ 251 (551)
. .....+++.+++++.+. +..++ .+.+.+ .++.++.||+||||||++|+.|++++.
T Consensus 61 ~----------------~~~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~ 124 (437)
T 4eqs_A 61 Y----------------TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESD 124 (437)
T ss_dssp C----------------CHHHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCT
T ss_pred c----------------CHHHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCc
Confidence 0 00122345689988775 33333 344443 234578999999999999998876542
Q ss_pred CCceeecchhhhccc-----cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCce
Q 008850 252 DGKTVITSDHALKLE-----FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKI 326 (551)
Q Consensus 252 ~~~~v~~~~~~~~~~-----~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi 326 (551)
....+.+.+++..+. ..+++++|||+|++|+|+|..++++|.+||++++.+++++.+|++.++.+.+.+++ .||
T Consensus 125 ~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~-~gV 203 (437)
T 4eqs_A 125 ITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDK-REI 203 (437)
T ss_dssp TEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHH-TTC
T ss_pred eEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhc-cce
Confidence 211222334443332 34889999999999999999999999999999999999999999999999999987 899
Q ss_pred EEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCC
Q 008850 327 DYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNL 404 (551)
Q Consensus 327 ~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~ 404 (551)
+++++..+. .+++ .+.+.++ +++++|.|++++|++||++++ +..++.. ++|+|.||+++| |+
T Consensus 204 ~i~~~~~v~~~~~~--~v~~~~g------~~~~~D~vl~a~G~~Pn~~~~--~~~gl~~~~~G~I~vd~~~~------Ts 267 (437)
T 4eqs_A 204 PYRLNEEINAINGN--EITFKSG------KVEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPVNDKFE------TN 267 (437)
T ss_dssp CEEESCCEEEEETT--EEEETTS------CEEECSEEEECCCEEESCGGG--TTSSCCCCTTSCEECCTTCB------CS
T ss_pred EEEeccEEEEecCC--eeeecCC------eEEeeeeEEEEeceecCcHHH--HhhhhhhccCCcEecCCCcc------CC
Confidence 999999887 4444 3566665 689999999999999999865 6677776 789999999999 89
Q ss_pred CCcEEEecCCCCC----------CCcHHHHHHHHHHHHHHHcCCCcc--CCCCCcceEEEcCCCeeEecCCHHHHHhhch
Q 008850 405 VPHLYCIGDANGK----------MMLAHAASAQGISVVEQVTGRDHV--LNHLSIPAACFTHPEISMVGLTEPQAREKAE 472 (551)
Q Consensus 405 ~~~IyA~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~p~~~~~~~~~~~vG~~e~~a~~~~~ 472 (551)
+|||||+|||++. +++++.|.+||+++|+||+|.+.. .++..+|.+.|++|++++||+||+||++.
T Consensus 268 ~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~-- 345 (437)
T 4eqs_A 268 VPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQF-- 345 (437)
T ss_dssp STTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGS--
T ss_pred CCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhC--
Confidence 9999999999753 357999999999999999997642 34667889999999999999999999753
Q ss_pred hcCCeEEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCC-hhHHHHHHHHH
Q 008850 473 KEGFEVSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPS-KPNLVKKLADV 533 (551)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~-~~~~i~~l~~~ 533 (551)
++ ++.++++....+. +.++++||+||++|++ +++|||+|++|++ +.++|+.++..
T Consensus 346 --~~--~~~~~~~~~~~~~-~~~~~~g~~Kli~d~~-~~~ilGa~~~g~~~a~e~i~~~~~a 401 (437)
T 4eqs_A 346 --DY--KMVEVTQGAHANY-YPGNSPLHLRVYYDTS-NRQILRAAAVGKEGADKRIDVLSMA 401 (437)
T ss_dssp --CE--EEEEEEEESSCTT-SSSCCEEEEEEEEETT-TCBEEEEEEEESSSHHHHHHHHHHH
T ss_pred --Cc--eEEEEecCCchhh-cCCCCcEEEEEEEECC-CCEEEEEEEECcCCHHHHHHHHHHH
Confidence 54 4445555555544 4577889999999998 9999999999985 89999887653
No 33
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=8.5e-51 Score=427.75 Aligned_cols=369 Identities=18% Similarity=0.236 Sum_probs=284.7
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCcEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
+||+|||||+||++||..|++. |++|+|||++. +| |.|.............
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g-------~~~~~~~~~~~~~~~~------------------- 56 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG-------YLSGGLSAYFNHTINE------------------- 56 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS-------SCCC-------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc-------ccCccchhhhcCCCCC-------------------
Confidence 5999999999999999999998 89999999943 33 2332211111110000
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CCcEEEe---CcceEEEeCeEEEeCCCCCCCCCCccCC
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GPQKVKF---GTDNIVTAKDIIIATGSVPFVPKGIEVD 252 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~v~~---~~g~~i~~d~lVlAtG~~p~~p~~~~~~ 252 (551)
. +.+.......+.+.+++++.+. +..+ +.+.+.+ .++.++.||+||||||+.|..|++++.+
T Consensus 57 -~-----------~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~ 124 (452)
T 3oc4_A 57 -L-----------HEARYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQ 124 (452)
T ss_dssp ----------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTT
T ss_pred -H-----------HHhhcCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCC
Confidence 0 0010111233455789987654 3333 3455544 3567899999999999999999888877
Q ss_pred Cceeecchhhh------ccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCCCc
Q 008850 253 GKTVITSDHAL------KLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINPRK 325 (551)
Q Consensus 253 ~~~v~~~~~~~------~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~~g 325 (551)
...++++..+. .....+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++ .|
T Consensus 125 ~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~-~G 203 (452)
T 3oc4_A 125 TEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEK-QA 203 (452)
T ss_dssp CTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHT-TT
T ss_pred CCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHH-cC
Confidence 66676654432 23346899999999999999999999999999999999999986 899999999999987 89
Q ss_pred eEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCC
Q 008850 326 IDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDAN 401 (551)
Q Consensus 326 i~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~ 401 (551)
|+++++..+. .+++.+.+++.+ .++++|.|++|+|++|+++++. .. +.. ++|+|.||+++|
T Consensus 204 V~i~~~~~v~~i~~~~~~v~v~~~~-------g~i~aD~Vv~A~G~~p~~~~l~--~~-~~~~~~g~i~vd~~~~----- 268 (452)
T 3oc4_A 204 VIFHFEETVLGIEETANGIVLETSE-------QEISCDSGIFALNLHPQLAYLD--KK-IQRNLDQTIAVDAYLQ----- 268 (452)
T ss_dssp EEEEETCCEEEEEECSSCEEEEESS-------CEEEESEEEECSCCBCCCSSCC--TT-SCBCTTSCBCCCTTCB-----
T ss_pred CEEEeCCEEEEEEccCCeEEEEECC-------CEEEeCEEEECcCCCCChHHHH--hh-hccCCCCCEEECcCcc-----
Confidence 9999998776 234445566533 2799999999999999998763 22 444 689999999999
Q ss_pred CCCCCcEEEecCCCCCC----------CcHHHHHHHHHHHHHHHcCCCccC--CCCCcceEEEcCCCeeEecCCHHHHHh
Q 008850 402 GNLVPHLYCIGDANGKM----------MLAHAASAQGISVVEQVTGRDHVL--NHLSIPAACFTHPEISMVGLTEPQARE 469 (551)
Q Consensus 402 ~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~--~~~~~p~~~~~~~~~~~vG~~e~~a~~ 469 (551)
|+.|+|||+|||++.+ ++++.|..||++||+||+|....+ .+..+|+++|+ ++++++|+||+||++
T Consensus 269 -t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~-~~~a~vG~te~~a~~ 346 (452)
T 3oc4_A 269 -TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGD-YYLASTGLTETEGLF 346 (452)
T ss_dssp -CSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEETT-EEEEEEECCSGGGGG
T ss_pred -CCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEcC-eeEEEecCCHHHHHH
Confidence 8999999999998753 589999999999999999876544 45677888885 799999999999986
Q ss_pred hchhcCCeEEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCC-ChhHHHHHHHHHh
Q 008850 470 KAEKEGFEVSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRP-SKPNLVKKLADVY 534 (551)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~-~~~~~i~~l~~~~ 534 (551)
. |+++++.++++... + +.+.++||+||++|++ +++|||+|++|+ .+.++|+.++.+.
T Consensus 347 ~----g~~~~~~~~~~~~~--~-~~~~~~~~~kli~~~~-~~~ilG~~~~g~~~a~e~i~~~~~ai 404 (452)
T 3oc4_A 347 F----PQTLASIIVRQPAP--P-LQHGTEILGKLIYDKV-TQRVLGAQLCSKNNCLEKINTLALSI 404 (452)
T ss_dssp S----SSCEEEEEEEEECT--T-TTCSCEEEEEEEEETT-TCBEEEEEEEESSCCTHHHHHHHHHH
T ss_pred C----CCceEEEEEecCCc--c-CCCCCeEEEEEEEECC-CCEEEEEEEEeCCCHHHHHHHHHHHH
Confidence 4 89999888776544 4 4567789999999987 899999999999 7999998776543
No 34
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.5e-50 Score=422.01 Aligned_cols=372 Identities=22% Similarity=0.294 Sum_probs=283.9
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
++||+|||||+||+++|..|++. +++|+|||+. .+++.. ..+|... . + .
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~---~~~p~~~-----------------~--~------~ 54 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP---CGIPYVV-----------------E--G------L 54 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC---cCCcccc-----------------C--C------C
Confidence 37999999999999999999998 7899999994 333210 0111100 0 0 0
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHH-HHHcCeEEEec-eEEEeCC--cEEEeCcc-eEEEeCeEEEeCCCCCCCCCCccCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNS-MKALGVDILTG-VGTILGP--QKVKFGTD-NIVTAKDIIIATGSVPFVPKGIEVD 252 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~-~~~~~~~--~~v~~~~g-~~i~~d~lVlAtG~~p~~p~~~~~~ 252 (551)
.+. +.+....... .++.+++++.+ ++..++. +.+.+.++ .++.||+||||||+.|+.|++++.+
T Consensus 55 ~~~-----------~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~ 123 (449)
T 3kd9_A 55 STP-----------DKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVN 123 (449)
T ss_dssp ----------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTT
T ss_pred CCH-----------HHhhhcCHHHHHHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCC
Confidence 000 1111111122 25679999998 5555554 45656665 4899999999999999988877766
Q ss_pred Cceeecc---hhhhccc---c--CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCC
Q 008850 253 GKTVITS---DHALKLE---F--VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINP 323 (551)
Q Consensus 253 ~~~v~~~---~~~~~~~---~--~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 323 (551)
...+++. +++..+. . .+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++
T Consensus 124 ~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~- 202 (449)
T 3kd9_A 124 LKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKK- 202 (449)
T ss_dssp STTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTT-
T ss_pred CCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHh-
Confidence 5555533 3333322 1 5689999999999999999999999999999999999998 999999999999987
Q ss_pred CceEEEeceEEE--eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccC
Q 008850 324 RKIDYHTGVFAT--KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDA 400 (551)
Q Consensus 324 ~gi~~~~~~~~~--~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~ 400 (551)
. |+++++..+. ..++.+...+.++ .++++|.|++|+|++|+++++ +..++.. ++|+|.||+++|
T Consensus 203 ~-v~i~~~~~v~~i~~~~~v~~v~~~g------~~i~~D~Vv~a~G~~p~~~l~--~~~gl~~~~~G~i~vd~~~~---- 269 (449)
T 3kd9_A 203 H-VNLRLQEITMKIEGEERVEKVVTDA------GEYKAELVILATGIKPNIELA--KQLGVRIGETGAIWTNEKMQ---- 269 (449)
T ss_dssp T-SEEEESCCEEEEECSSSCCEEEETT------EEEECSEEEECSCEEECCHHH--HHTTCCBCTTSSBCCCTTCB----
T ss_pred C-cEEEeCCeEEEEeccCcEEEEEeCC------CEEECCEEEEeeCCccCHHHH--HhCCccCCCCCCEEECCCCc----
Confidence 6 9999998776 2222232234443 689999999999999998754 5667766 688999999999
Q ss_pred CCCCCCcEEEecCCCC-------C---CCcHHHHHHHHHHHHHHHcCCCccCC-CCCcceEEEcCCCeeEecCCHHHHHh
Q 008850 401 NGNLVPHLYCIGDANG-------K---MMLAHAASAQGISVVEQVTGRDHVLN-HLSIPAACFTHPEISMVGLTEPQARE 469 (551)
Q Consensus 401 ~~t~~~~IyA~GD~~~-------~---~~~~~~A~~~g~~aa~~i~g~~~~~~-~~~~p~~~~~~~~~~~vG~~e~~a~~ 469 (551)
|+.|||||+|||+. . +++++.|..||+++|+||+|++..++ +..+|++.|++|+++++|+||+||++
T Consensus 270 --t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~ 347 (449)
T 3kd9_A 270 --TSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALK 347 (449)
T ss_dssp --CSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHH
T ss_pred --cCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHH
Confidence 89999999999973 2 47899999999999999999876554 34678899999999999999999987
Q ss_pred hchhcCCeEEEEEEecccchhhhhc-CCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHHHh
Q 008850 470 KAEKEGFEVSVAKTSFKANTKALAE-NEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLADVY 534 (551)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~~~ 534 (551)
. |+++.+.++. .+.++... ++++||+||++|++ +++|||+|++|+.+.++|+.++.+-
T Consensus 348 ~----g~~~~~~~~~--~~~~~~~~~~~~~~~~kli~~~~-~~~ilG~~~~g~~a~e~i~~~~~ai 406 (449)
T 3kd9_A 348 E----GYDVRTAFIK--ASTRPHYYPGGREIWLKGVVDNE-TNRLLGVQVVGSDILPRIDTAAAML 406 (449)
T ss_dssp T----TCCEEEEEEE--EESSCTTSTTCCEEEEEEEEETT-TCBEEEEEEEESSCHHHHHHHHHHH
T ss_pred C----CCceEEEEEe--cCCccccCCCCceEEEEEEEECC-CCEEEEEEEEChHHHHHHHHHHHHH
Confidence 5 8998877654 55666554 67789999999987 8999999999999999998765543
No 35
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1e-48 Score=414.34 Aligned_cols=378 Identities=21% Similarity=0.244 Sum_probs=268.8
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCcEEEeeCC-ccCcccccCCc-cCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGD-VVGGTCVNRGC-VPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~-~~GG~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
+||+|||||+||+++|..|++. |++|+|||++ .++. ..| +|.. ....+
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~----~~~gl~~~----~~g~~-------------------- 55 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISY----GGCGIPYY----VSGEV-------------------- 55 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccc----cccccchh----hcCCC--------------------
Confidence 6999999999999999999998 8999999994 3321 111 1110 00000
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CCcEEEeCc---ce--EEEeCeEEEeCCCCCCCCCCc
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GPQKVKFGT---DN--IVTAKDIIIATGSVPFVPKGI 249 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~v~~~~---g~--~i~~d~lVlAtG~~p~~p~~~ 249 (551)
.....+..+ ...+........+..+++++.+. +..+ +.+.+.+.+ +. ++.||+||||||+.|..|+++
T Consensus 56 ~~~~~~~~~----~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~ 131 (472)
T 3iwa_A 56 SNIESLQAT----PYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVE 131 (472)
T ss_dssp -----------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCT
T ss_pred CchHHhccc----cchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCC
Confidence 000000000 00011122222334688887654 3333 345555543 44 799999999999999988877
Q ss_pred cCCCceeec---chhhhccc-----cCCceEEEECCChhHHHHHHHHHhC-CCeEEEEcccCcCCC-CCCHHHHHHHHHH
Q 008850 250 EVDGKTVIT---SDHALKLE-----FVPDWIAIVGSGYIGLEFSDVYTAL-GSEVTFIEALDQLMP-GFDPEIGKLAQRV 319 (551)
Q Consensus 250 ~~~~~~v~~---~~~~~~~~-----~~~k~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~-~~~~~~~~~~~~~ 319 (551)
+.+...+++ ..+...+. ..+++++|||+|++|+|+|..|.+. |.+|+++++.+++++ .+++++.+.+.+.
T Consensus 132 G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 211 (472)
T 3iwa_A 132 GMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHD 211 (472)
T ss_dssp TTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHH
T ss_pred CCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHH
Confidence 765444443 33333333 4579999999999999999999999 999999999999999 8999999999999
Q ss_pred HhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCC
Q 008850 320 LINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERM 395 (551)
Q Consensus 320 l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~ 395 (551)
+++ .||+++++..+. .+++.+.+++.++ +++++|.|++|+|++|+++++ +..++.. ++|+|.||+++
T Consensus 212 l~~-~GV~i~~~~~v~~i~~~~~~v~v~~~~g------~~i~aD~Vv~a~G~~p~~~l~--~~~gl~~~~~g~i~vd~~~ 282 (472)
T 3iwa_A 212 LEK-NDVVVHTGEKVVRLEGENGKVARVITDK------RTLDADLVILAAGVSPNTQLA--RDAGLELDPRGAIIVDTRM 282 (472)
T ss_dssp HHH-TTCEEECSCCEEEEEESSSBEEEEEESS------CEEECSEEEECSCEEECCHHH--HHHTCCBCTTCCEECCTTC
T ss_pred HHh-cCCEEEeCCEEEEEEccCCeEEEEEeCC------CEEEcCEEEECCCCCcCHHHH--HhCCccCCCCCCEEECCCc
Confidence 987 899999997766 3345566777665 589999999999999998754 5566766 68999999999
Q ss_pred ccccCCCCCCCcEEEecCCC-------CC---CCcHHHHHHHHHHHHHHHcCCCccCC-CCCcceEEEcCCCeeEecCCH
Q 008850 396 RVIDANGNLVPHLYCIGDAN-------GK---MMLAHAASAQGISVVEQVTGRDHVLN-HLSIPAACFTHPEISMVGLTE 464 (551)
Q Consensus 396 ~~~~~~~t~~~~IyA~GD~~-------~~---~~~~~~A~~~g~~aa~~i~g~~~~~~-~~~~p~~~~~~~~~~~vG~~e 464 (551)
| |+.|||||+|||+ +. +++++.|..||+++|+||+|++..+. ....+++.|++|+++++|+||
T Consensus 283 ~------t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e 356 (472)
T 3iwa_A 283 R------TSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTV 356 (472)
T ss_dssp B------CSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCH
T ss_pred c------cCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCH
Confidence 9 8999999999997 33 35899999999999999999765543 223344668899999999999
Q ss_pred HHHHhhchhcCCeEEEEEEecccchhhhhc-CCCceEEEEEEeCCCCCCcceeeeeCC---ChhHHHHHHHHH
Q 008850 465 PQAREKAEKEGFEVSVAKTSFKANTKALAE-NEGEGLAKGVPRNFASSERTNQHSDRP---SKPNLVKKLADV 533 (551)
Q Consensus 465 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kli~~~~~~~~~lg~~~~g~---~~~~~i~~l~~~ 533 (551)
+||+++ |+++++..+ ..+.++... ++++||+|||+|++ +++|||+|++|+ .+.++|+.++.+
T Consensus 357 ~~a~~~----g~~~~~~~~--~~~~~~~~~~~~~~~~~kli~~~~-~~~ilG~~~~g~~~~~~~~~i~~~~~a 422 (472)
T 3iwa_A 357 EGALRE----GYDAVNVHV--EQFDRAHFYPEKTIMTLQLVVDRP-TRRVLGIQGFSTLGDALTARINAVATM 422 (472)
T ss_dssp HHHHHT----TCCEEEEEE--EC-----------CEEEEEEEETT-TCBEEEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHc----CCceEEEEE--ecCCccCccCCCceEEEEEEEECC-CCEEEEEEEECCCcccHHHHHHHHHHH
Confidence 999875 889887664 566677665 78899999999987 899999999999 457888766554
No 36
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.3e-48 Score=411.31 Aligned_cols=374 Identities=19% Similarity=0.222 Sum_probs=284.5
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCcEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
+||+|||||++|+++|..|++. |++|+|||++. ++. .+| ......... +. ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~----~~~---~~~~~~~g~--------------~~----~~ 55 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF----LSC---GIALYLGKE--------------IK----NN 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB----CGG---GHHHHHTTC--------------BG----GG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc----ccc---cchhhhcCC--------------cc----cC
Confidence 4899999999999999999998 99999999943 331 111 100000000 00 00
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC--CcEEEeCc-----ceEEEeCeEEEeCCCCCCCCCCcc
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG--PQKVKFGT-----DNIVTAKDIIIATGSVPFVPKGIE 250 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~~~~-----g~~i~~d~lVlAtG~~p~~p~~~~ 250 (551)
++..+ ...+...+++.+++++.+. +..++ .+.+.+.+ +.++.||+||||||++|..|++++
T Consensus 56 ~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g 124 (452)
T 2cdu_A 56 DPRGL-----------FYSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPG 124 (452)
T ss_dssp CGGGG-----------BSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTT
T ss_pred CHHHh-----------hhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCC
Confidence 11100 0011223345799997776 44443 45666643 567999999999999999888776
Q ss_pred CCCceeecch------hhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC-CCCHHHHHHHHHHHhCC
Q 008850 251 VDGKTVITSD------HALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP-GFDPEIGKLAQRVLINP 323 (551)
Q Consensus 251 ~~~~~v~~~~------~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~ 323 (551)
.+...++++. .+......+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.+++
T Consensus 125 ~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~- 203 (452)
T 2cdu_A 125 IDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEA- 203 (452)
T ss_dssp TTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHH-
T ss_pred CCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHH-
Confidence 6544555433 2333345689999999999999999999999999999999999998 6999999999999987
Q ss_pred CceEEEeceEEE---eCCCcEE-EEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccc
Q 008850 324 RKIDYHTGVFAT---KDGKPVT-IELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVI 398 (551)
Q Consensus 324 ~gi~~~~~~~~~---~~~~~~~-v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~ 398 (551)
.||+++++..+. .+++.+. +.+ ++ +++++|.|++|+|++|+++++ +.. +.. ++|+|.||+++|
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g------~~i~~D~vv~a~G~~p~~~ll--~~~-l~~~~~G~i~Vd~~~~-- 271 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTL-DG------KEIKSDIAILCIGFRPNTELL--KGK-VAMLDNGAIITDEYMH-- 271 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEET-TS------CEEEESEEEECCCEEECCGGG--TTT-SCBCTTSCBCCCTTSB--
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEe-CC------CEEECCEEEECcCCCCCHHHH--HHh-hhcCCCCCEEECCCcC--
Confidence 899999998776 2233332 332 33 579999999999999999865 444 555 689999999999
Q ss_pred cCCCCCCCcEEEecCCCCC----------CCcHHHHHHHHHHHHHHHcCCCccC-CCCCcceEEEcCCCeeEecCCHHHH
Q 008850 399 DANGNLVPHLYCIGDANGK----------MMLAHAASAQGISVVEQVTGRDHVL-NHLSIPAACFTHPEISMVGLTEPQA 467 (551)
Q Consensus 399 ~~~~t~~~~IyA~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~p~~~~~~~~~~~vG~~e~~a 467 (551)
|+.|||||+|||++. +++++.|..||+++|+||+|.+.++ .+...+++.|++|+++++|++|++|
T Consensus 272 ----t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a 347 (452)
T 2cdu_A 272 ----SSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTALA 347 (452)
T ss_dssp ----CSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHH
T ss_pred ----cCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecCCHHHH
Confidence 899999999999873 3689999999999999999875433 3345677888899999999999999
Q ss_pred HhhchhcCCeEEEEEEecccchhhhhc-CCCceEEEEEEeCCCCCCcceeeeeCC-ChhHHHHHHHHHhh
Q 008850 468 REKAEKEGFEVSVAKTSFKANTKALAE-NEGEGLAKGVPRNFASSERTNQHSDRP-SKPNLVKKLADVYM 535 (551)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kli~~~~~~~~~lg~~~~g~-~~~~~i~~l~~~~~ 535 (551)
++. |+++.+. .|..+.++... +.+++|+|++++++ +++|||+|++|+ .+.++|+.++.+..
T Consensus 348 ~~~----g~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~~~~~~i~~~~~ai~ 410 (452)
T 2cdu_A 348 KAN----NLKVSEV--IIADNYRPEFMLSTDEVLMSLVYDPK-TRVILGGALSSMHDVSQSANVLSVCIQ 410 (452)
T ss_dssp HHT----TCCCEEE--EEEEESSCTTBSCCCEEEEEEEECTT-TCBEEEEEEEESSCCHHHHHHHHHHHH
T ss_pred HHc----CCceEEE--EEecCCccccCCCCceEEEEEEEECC-CCEEEEEEEEcCccHHHHHHHHHHHHH
Confidence 874 8888766 36677777665 56789999999987 799999999999 89999988776543
No 37
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=2.9e-48 Score=412.26 Aligned_cols=372 Identities=19% Similarity=0.241 Sum_probs=282.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcC---CcEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKG---LKTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAA 176 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g---~~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 176 (551)
++||+|||||+||+++|..|++.| .+|+|||++. ++. .+|- ... +.... +.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~----~~~~---~~~-------------~~~~~-~~---- 89 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISF----LGAG---MAL-------------WIGEQ-IA---- 89 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSB----CGGG---HHH-------------HHTTS-SS----
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCc----cccc---cch-------------hhcCc-cC----
Confidence 489999999999999999999988 9999999943 332 1220 000 00000 00
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CCcEEEeC-c--ceEEEeCeEEEeCCCCCCCCCCcc
Q 008850 177 GYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GPQKVKFG-T--DNIVTAKDIIIATGSVPFVPKGIE 250 (551)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~v~~~-~--g~~i~~d~lVlAtG~~p~~p~~~~ 250 (551)
+...+ .......+++.+++++.+. +..+ +.+.+.+. + +.++.||+||||||++|..|++++
T Consensus 90 --~~~~~-----------~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G 156 (490)
T 2bc0_A 90 --GPEGL-----------FYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKG 156 (490)
T ss_dssp --CSGGG-----------BSCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBT
T ss_pred --CHHHh-----------hhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCC
Confidence 00000 0001123345789997776 4444 35666665 3 457999999999999999888776
Q ss_pred CC-----------Cceeecch------hhhccc--cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC-CCCH
Q 008850 251 VD-----------GKTVITSD------HALKLE--FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP-GFDP 310 (551)
Q Consensus 251 ~~-----------~~~v~~~~------~~~~~~--~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~ 310 (551)
.+ ...++++. .+.+.. ..+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++
T Consensus 157 ~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~ 236 (490)
T 2bc0_A 157 AEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDR 236 (490)
T ss_dssp CCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCH
T ss_pred ccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHH
Confidence 55 34455432 222333 5689999999999999999999999999999999999998 6999
Q ss_pred HHHHHHHHHHhCCCceEEEeceEEE--eCCC-cEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CC
Q 008850 311 EIGKLAQRVLINPRKIDYHTGVFAT--KDGK-PVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QR 386 (551)
Q Consensus 311 ~~~~~~~~~l~~~~gi~~~~~~~~~--~~~~-~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~ 386 (551)
++.+.+.+.+++ .||+++++..+. ..++ ...+++ ++ +++++|.|++|+|++|+++++ +.. +.. ++
T Consensus 237 ~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~v~~v~~-~g------~~i~~D~Vi~a~G~~p~~~ll--~~~-l~~~~~ 305 (490)
T 2bc0_A 237 DLTDLMAKNMEE-HGIQLAFGETVKEVAGNGKVEKIIT-DK------NEYDVDMVILAVGFRPNTTLG--NGK-IDLFRN 305 (490)
T ss_dssp HHHHHHHHHHHT-TTCEEEETCCEEEEECSSSCCEEEE-SS------CEEECSEEEECCCEEECCGGG--TTC-SCBCTT
T ss_pred HHHHHHHHHHHh-CCeEEEeCCEEEEEEcCCcEEEEEE-CC------cEEECCEEEECCCCCcChHHH--Hhh-hccCCC
Confidence 999999999987 899999998776 2222 223444 33 579999999999999999865 444 554 68
Q ss_pred CceeeCCCCccccCCCCCCCcEEEecCCCCC----------CCcHHHHHHHHHHHHHHHcCCCccC-CCCCcceEEEcCC
Q 008850 387 GFVPVDERMRVIDANGNLVPHLYCIGDANGK----------MMLAHAASAQGISVVEQVTGRDHVL-NHLSIPAACFTHP 455 (551)
Q Consensus 387 G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~p~~~~~~~ 455 (551)
|+|.||+++| |+.|+|||+|||++. +++++.|..||+++|+||+|...++ .+...++..+++|
T Consensus 306 G~I~Vd~~~~------t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~ 379 (490)
T 2bc0_A 306 GAFLVNKRQE------TSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGL 379 (490)
T ss_dssp SCBCCCTTCB------CSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTE
T ss_pred CCEEECCCcc------cCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCc
Confidence 9999999999 899999999999863 3689999999999999999875432 2345666777799
Q ss_pred CeeEecCCHHHHHhhchhcCCeEEEEEEecccchhhhhcC--CCceEEEEEEeCCCCCCcceeeeeCC-ChhHHHHHHHH
Q 008850 456 EISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAEN--EGEGLAKGVPRNFASSERTNQHSDRP-SKPNLVKKLAD 532 (551)
Q Consensus 456 ~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~kli~~~~~~~~~lg~~~~g~-~~~~~i~~l~~ 532 (551)
+++++|++|++|++. |+++++. .|..+.++.... .+++|+|+++|++ +++|||+|++|+ .+.++|+.++.
T Consensus 380 ~~~~vG~~~~~a~~~----g~~~~~~--~~~~~~~~~~~~~~~~~~~~kl~~~~~-~~~ilG~~~~g~~~a~e~i~~~~~ 452 (490)
T 2bc0_A 380 HMVSTGLTLEKAKRL----GFDAAVT--EYTDNQKPEFIEHGNFPVTIKIVYDKD-SRRILGAQMAAREDVSMGIHMFSL 452 (490)
T ss_dssp EEEEEECCHHHHHHT----TCCEEEE--EEEEESSCTTCCSSCCEEEEEEEEETT-TCBEEEEEEEESSCCTTHHHHHHH
T ss_pred EeEEeeCCHHHHHHc----CCceEEE--EEecCCcccccCCCCceEEEEEEEECC-CCEEEEEEEEcCcCHHHHHHHHHH
Confidence 999999999999874 8888876 567777776653 6789999999987 799999999999 89998877765
Q ss_pred Hh
Q 008850 533 VY 534 (551)
Q Consensus 533 ~~ 534 (551)
+.
T Consensus 453 ai 454 (490)
T 2bc0_A 453 AI 454 (490)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 38
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=3.2e-48 Score=421.55 Aligned_cols=376 Identities=19% Similarity=0.285 Sum_probs=282.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHc--CCcEEEeeCC-ccCcccccCCc-cCChhhHhhHHHHHHHHhhhhhhhcCccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGD-VVGGTCVNRGC-VPSKALLAVSGRMRELQSEHHMKALGLQVHA 175 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~-~~GG~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 175 (551)
.++||+|||||+||++||..|++. |++|+|||+. .++- ..| +|. .. .+...
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~----~~~~lp~-----------------~~--~g~~~-- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF----ANCGLPY-----------------YI--GGVIT-- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB----CGGGHHH-----------------HH--TTSSC--
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc----cCCCCch-----------------hh--cCcCC--
Confidence 347999999999999999999998 8999999994 3321 111 000 00 00000
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe--CCcEEEeC---cce--EEEeCeEEEeCCCCCCCCC
Q 008850 176 AGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL--GPQKVKFG---TDN--IVTAKDIIIATGSVPFVPK 247 (551)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~~~~v~~~---~g~--~i~~d~lVlAtG~~p~~p~ 247 (551)
... ..+...+....++.+++++.+.. ..+ +.+.+.+. ++. ++.||+||||||+.|..|+
T Consensus 90 ---~~~----------~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~ 156 (588)
T 3ics_A 90 ---ERQ----------KLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPS 156 (588)
T ss_dssp ---CGG----------GGBSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred ---ChH----------HhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCC
Confidence 000 00111122233457899876643 333 34555553 344 7899999999999999888
Q ss_pred CccC-CCceeecchhhhcc--------ccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHH
Q 008850 248 GIEV-DGKTVITSDHALKL--------EFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQR 318 (551)
Q Consensus 248 ~~~~-~~~~v~~~~~~~~~--------~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~ 318 (551)
+++. +...+++....... ...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+
T Consensus 157 i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~ 236 (588)
T 3ics_A 157 IPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHE 236 (588)
T ss_dssp CTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHH
T ss_pred CCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHH
Confidence 7776 44556665544332 24689999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCc
Q 008850 319 VLINPRKIDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMR 396 (551)
Q Consensus 319 ~l~~~~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~ 396 (551)
.+++ .||+++++..+. .+.+...+++.++ +++++|.|++|+|++|+++++ +..++.. ++|+|.||+++|
T Consensus 237 ~l~~-~GV~i~~~~~v~~i~~~~~~v~~~~g------~~i~~D~Vi~a~G~~p~~~~l--~~~g~~~~~~g~i~vd~~~~ 307 (588)
T 3ics_A 237 HMKN-HDVELVFEDGVDALEENGAVVRLKSG------SVIQTDMLILAIGVQPESSLA--KGAGLALGVRGTIKVNEKFQ 307 (588)
T ss_dssp HHHH-TTCEEECSCCEEEEEGGGTEEEETTS------CEEECSEEEECSCEEECCHHH--HHTTCCBCGGGCBCCCTTSB
T ss_pred HHHH-cCCEEEECCeEEEEecCCCEEEECCC------CEEEcCEEEEccCCCCChHHH--HhcCceEcCCCCEEECCccc
Confidence 9987 899999998776 2221124666654 589999999999999999754 5667766 689999999999
Q ss_pred cccCCCCCCCcEEEecCCC-------CC---CCcHHHHHHHHHHHHHHHcC-CCccCCC-CCcceEEEcCCCeeEecCCH
Q 008850 397 VIDANGNLVPHLYCIGDAN-------GK---MMLAHAASAQGISVVEQVTG-RDHVLNH-LSIPAACFTHPEISMVGLTE 464 (551)
Q Consensus 397 ~~~~~~t~~~~IyA~GD~~-------~~---~~~~~~A~~~g~~aa~~i~g-~~~~~~~-~~~p~~~~~~~~~~~vG~~e 464 (551)
|+.|||||+|||+ +. +++++.|..||+++|+||+| .+..+.. ...+.+.|++|++++||+||
T Consensus 308 ------t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte 381 (588)
T 3ics_A 308 ------TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNE 381 (588)
T ss_dssp ------CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCH
T ss_pred ------cCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCH
Confidence 8999999999998 32 46899999999999999999 5544321 12233458999999999999
Q ss_pred HHHHhhchhcCCeEEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCC-hhHHHHHHHHHh
Q 008850 465 PQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPS-KPNLVKKLADVY 534 (551)
Q Consensus 465 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~-~~~~i~~l~~~~ 534 (551)
+||+++ |+++++.+++.... ..++.+.++||+|||+|++ +++|||+|++|+. +.++|+.++.+-
T Consensus 382 ~~a~~~----g~~~~~~~~~~~~~-~~~~~~~~~~~~k~i~~~~-~~~ilG~~~~g~~~~~e~i~~~~~ai 446 (588)
T 3ics_A 382 KILKRL----NIPYEVVHVQANSH-AGYYPNATPVLIKLIFNKD-SGKIYGAQTLGRDGVDKRMDVIATAI 446 (588)
T ss_dssp HHHHHT----TCCCEEEEEEEESS-CTTSTTCCEEEEEEEECTT-TCBEEEEEEEESSSHHHHHHHHHHHH
T ss_pred HHHHHc----CCCeEEEEEecCCc-cccCCCCceEEEEEEEECC-CCeEEEEEEEcCCcHHHHHHHHHHHH
Confidence 999975 88888877653222 2356778899999999987 8999999999985 899998876543
No 39
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=5.9e-48 Score=417.98 Aligned_cols=372 Identities=20% Similarity=0.263 Sum_probs=280.9
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCcEEEeeCC-ccCcccccCCc-cCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGD-VVGGTCVNRGC-VPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~-~~GG~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
.||+|||||+||+++|..|++. +++|+|||+. .++. ..| +|. .. .+...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~----~~~~l~~-----------------~~--~~~~~---- 54 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF----ANCGLPY-----------------HI--SGEIA---- 54 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB----CGGGHHH-----------------HH--TSSSC----
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc----cccCchH-----------------Hh--cCCcC----
Confidence 5899999999999999999998 7899999994 3321 000 110 00 00000
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CCcEEEeCc---c--eEEEeCeEEEeCCCCCCCCCCc
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GPQKVKFGT---D--NIVTAKDIIIATGSVPFVPKGI 249 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~v~~~~---g--~~i~~d~lVlAtG~~p~~p~~~ 249 (551)
... ..+........++.+++++.+. +..+ +.+.+.+.+ + .++.||+||||||+.|+.|+++
T Consensus 55 -~~~----------~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ip 123 (565)
T 3ntd_A 55 -QRS----------ALVLQTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIP 123 (565)
T ss_dssp -CGG----------GGBCCCHHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCT
T ss_pred -ChH----------HhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCC
Confidence 000 0000011112234688887654 3333 345555432 3 4799999999999999998877
Q ss_pred cCCCceeecchhh---hcc-----ccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHh
Q 008850 250 EVDGKTVITSDHA---LKL-----EFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLI 321 (551)
Q Consensus 250 ~~~~~~v~~~~~~---~~~-----~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~ 321 (551)
+.+...+++...+ ..+ ...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.++
T Consensus 124 G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~ 203 (565)
T 3ntd_A 124 GVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIR 203 (565)
T ss_dssp TCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHH
T ss_pred CCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHH
Confidence 7655555554433 222 24579999999999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEeceEEE---e-------------------CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcc
Q 008850 322 NPRKIDYHTGVFAT---K-------------------DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLEN 379 (551)
Q Consensus 322 ~~~gi~~~~~~~~~---~-------------------~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~ 379 (551)
+ .||+++++..+. . +++.+.+++.++ +++++|.|++|+|++|+++++ +.
T Consensus 204 ~-~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g------~~i~~D~vi~a~G~~p~~~l~--~~ 274 (565)
T 3ntd_A 204 D-QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG------ELLETDLLIMAIGVRPETQLA--RD 274 (565)
T ss_dssp H-TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS------CEEEESEEEECSCEEECCHHH--HH
T ss_pred H-CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC------CEEEcCEEEECcCCccchHHH--Hh
Confidence 7 899999987766 2 244556666554 589999999999999998754 55
Q ss_pred ccccc-CCCceeeCCCCccccCCCCCCCcEEEecCCC-------CC---CCcHHHHHHHHHHHHHHHcCCCccCCC-CCc
Q 008850 380 INVVT-QRGFVPVDERMRVIDANGNLVPHLYCIGDAN-------GK---MMLAHAASAQGISVVEQVTGRDHVLNH-LSI 447 (551)
Q Consensus 380 ~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~-------~~---~~~~~~A~~~g~~aa~~i~g~~~~~~~-~~~ 447 (551)
.++.. ++|+|.||+++| |+.|||||+|||+ +. +++++.|..||++||+||+|+...++. ...
T Consensus 275 ~g~~~~~~g~i~vd~~~~------t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~ 348 (565)
T 3ntd_A 275 AGLAIGELGGIKVNAMMQ------TSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGT 348 (565)
T ss_dssp HTCCBCTTSSBCCCTTCB------CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCC
T ss_pred CCcccCCCCCEEECCCcc------cCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcccc
Confidence 66766 679999999999 8999999999997 33 358999999999999999998765432 234
Q ss_pred ceEEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEecccchhhhhc-CCCceEEEEEEeCCCCCCcceeeeeCCCh-hH
Q 008850 448 PAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAE-NEGEGLAKGVPRNFASSERTNQHSDRPSK-PN 525 (551)
Q Consensus 448 p~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kli~~~~~~~~~lg~~~~g~~~-~~ 525 (551)
+.+.|++|+++++|+||+||++. |+++++.. +..+.++... +.++||+||++|++ +++|||+|++|+++ .+
T Consensus 349 ~~~~~~~~~~~~vG~~e~~a~~~----g~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~~~~-~~~ilG~~~~g~~a~~e 421 (565)
T 3ntd_A 349 AICKVFDLAVGATGKNEKQLKQA----GIAFEKVY--VHTASHASYYPGAEVVSFKLLFDPV-KGTIFGAQAVGKDGIDK 421 (565)
T ss_dssp EEEEETTEEEEEEECCHHHHHHT----TCCCEEEE--EEEESSCTTSTTCCEEEEEEEECTT-TCBEEEEEEEESSSHHH
T ss_pred eEEEEcCcEEEEecCCHHHHHHc----CCCeEEEE--EecCcccCcCCCCceEEEEEEEECC-CCEEEEEEEECCccHHH
Confidence 45778999999999999999875 88887654 4555666554 77889999999987 89999999999999 89
Q ss_pred HHHHHHHH
Q 008850 526 LVKKLADV 533 (551)
Q Consensus 526 ~i~~l~~~ 533 (551)
+|+.++.+
T Consensus 422 ~i~~~~~a 429 (565)
T 3ntd_A 422 RIDVMAVA 429 (565)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88776544
No 40
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2.6e-47 Score=403.91 Aligned_cols=372 Identities=20% Similarity=0.253 Sum_probs=283.6
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCcEEEeeCCc-cCcccccCCc-cCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGDV-VGGTCVNRGC-VPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~~-~GG~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
+||+|||||+||+++|..|++. |.+|+|||+.. .++. .| +|. +.. +..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~----~~~~~~-----------------~~~--~~~----- 88 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA----QCGLPY-----------------VIS--GAI----- 88 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC----GGGHHH-----------------HHT--TSS-----
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCC----CCCcch-----------------hhc--CCc-----
Confidence 6999999999999999999997 89999999944 3211 11 110 000 000
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHH-HHcCeEEEeceE-EEe--CCcEEEeCc---ce--EEEeCeEEEeCCCCCCCCCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSM-KALGVDILTGVG-TIL--GPQKVKFGT---DN--IVTAKDIIIATGSVPFVPKG 248 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~--~~~~v~~~~---g~--~i~~d~lVlAtG~~p~~p~~ 248 (551)
.++..+.. .....+ +..+++++.+.. ..+ +.+.+.+.+ ++ ++.||+||||||+.|+.|++
T Consensus 89 ~~~~~l~~-----------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i 157 (480)
T 3cgb_A 89 ASTEKLIA-----------RNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEW 157 (480)
T ss_dssp SCGGGGBS-----------SCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCC
T ss_pred CCHHHhhh-----------cCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCC
Confidence 01111000 001122 335899998643 344 345666542 54 79999999999999998887
Q ss_pred ccCCCceeec---chhhhcccc-----CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHH
Q 008850 249 IEVDGKTVIT---SDHALKLEF-----VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVL 320 (551)
Q Consensus 249 ~~~~~~~v~~---~~~~~~~~~-----~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l 320 (551)
++.+...+++ .+++..+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+
T Consensus 158 ~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l 237 (480)
T 3cgb_A 158 EGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEA 237 (480)
T ss_dssp BTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHH
T ss_pred CCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHH
Confidence 7765445554 344444433 68999999999999999999999999999999999999999999999999999
Q ss_pred hCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCc
Q 008850 321 INPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMR 396 (551)
Q Consensus 321 ~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~ 396 (551)
++ .||+++++..+. .+++...+.+ ++ .++++|.|++|+|++|+++++ +..++.. ++|+|.||+++|
T Consensus 238 ~~-~Gv~i~~~~~v~~i~~~~~v~~v~~-~~------~~i~~D~vi~a~G~~p~~~~l--~~~g~~~~~~G~I~Vd~~~~ 307 (480)
T 3cgb_A 238 DK-HHIEILTNENVKAFKGNERVEAVET-DK------GTYKADLVLVSVGVKPNTDFL--EGTNIRTNHKGAIEVNAYMQ 307 (480)
T ss_dssp HH-TTCEEECSCCEEEEEESSBEEEEEE-TT------EEEECSEEEECSCEEESCGGG--TTSCCCBCTTSCBCCCTTSB
T ss_pred HH-cCcEEEcCCEEEEEEcCCcEEEEEE-CC------CEEEcCEEEECcCCCcChHHH--HhCCcccCCCCCEEECCCcc
Confidence 87 899999998776 3322223443 22 479999999999999998865 5666765 678999999999
Q ss_pred cccCCCCCCCcEEEecCCCCC----------CCcHHHHHHHHHHHHHHHcCCCccC-CCCCcceEEEcCCCeeEecCCHH
Q 008850 397 VIDANGNLVPHLYCIGDANGK----------MMLAHAASAQGISVVEQVTGRDHVL-NHLSIPAACFTHPEISMVGLTEP 465 (551)
Q Consensus 397 ~~~~~~t~~~~IyA~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~p~~~~~~~~~~~vG~~e~ 465 (551)
|+.|+|||+|||+.. +++++.|..||+++|+||+|....+ ++..+|++.|++|+++++|++|+
T Consensus 308 ------ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~ 381 (480)
T 3cgb_A 308 ------TNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEK 381 (480)
T ss_dssp ------CSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHH
T ss_pred ------CCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccceeEEEECCcEEEEeCCCHH
Confidence 889999999999832 2679999999999999999876554 35678999999999999999999
Q ss_pred HHHhhchhcCCeEEEEEEecccchhhhh-cCCCceEEEEEEeCCCCCCcceeeeeCCC-hhHHHHHHHHHhh
Q 008850 466 QAREKAEKEGFEVSVAKTSFKANTKALA-ENEGEGLAKGVPRNFASSERTNQHSDRPS-KPNLVKKLADVYM 535 (551)
Q Consensus 466 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~kli~~~~~~~~~lg~~~~g~~-~~~~i~~l~~~~~ 535 (551)
+|++. |+++.+..+.+ +.++.. .+.+++|+||++|++ +++|||++++|+. +.++|+.++.+..
T Consensus 382 ~a~~~----g~~~~~~~~~~--~~~~~~~~~~~~~~~kl~~~~~-~~~ilG~~~vg~~~a~e~i~~~~~ai~ 446 (480)
T 3cgb_A 382 EAKGL----HIPYKTVKVDS--TNMAGYYPNAKPLYLKLLYRSD-TKQLLGGQVIGEEGVDKRIDVIAMALF 446 (480)
T ss_dssp HHHHT----TCCEEEEEEEE--ESSCTTSTTCCEEEEEEEEETT-TCBEEEEEEEESSSHHHHHHHHHHHHH
T ss_pred HHHHc----CCceEEEEEec--CCcccccCCCceEEEEEEEECC-CCEEEEEEEECCccHHHHHHHHHHHHH
Confidence 99875 88888776554 334432 356789999999987 7999999999999 9999998876543
No 41
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=1.5e-47 Score=402.47 Aligned_cols=372 Identities=20% Similarity=0.258 Sum_probs=282.0
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
+||+|||||+||+++|..|++. |++|+|||++...| +.+| ..... .. +.. .+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~---~~~~---~~~~~-------------~~--~~~-----~~ 54 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS---FLSA---GMQLY-------------LE--GKV-----KD 54 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS---BCGG---GHHHH-------------HT--TSS-----CC
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC---cccc---cchhh-------------hc--Ccc-----CC
Confidence 3899999999999999999998 89999999954222 1111 10000 00 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--CCcEEEeCc---ce--EEEeCeEEEeCCCCCCCCCCccC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--GPQKVKFGT---DN--IVTAKDIIIATGSVPFVPKGIEV 251 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~~~v~~~~---g~--~i~~d~lVlAtG~~p~~p~~~~~ 251 (551)
+..+ .......+++.+++++.+... .+ +.+.|.+.+ |+ ++.||+||||||++|..|++++.
T Consensus 55 ~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~ 123 (447)
T 1nhp_A 55 VNSV-----------RYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGK 123 (447)
T ss_dssp GGGS-----------BSCCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTT
T ss_pred HHHh-----------hcCCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCC
Confidence 0000 001112344579999777644 33 456676643 43 48999999999999998887776
Q ss_pred CCceeecchhh---hccc---c--CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC-CCCHHHHHHHHHHHhC
Q 008850 252 DGKTVITSDHA---LKLE---F--VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP-GFDPEIGKLAQRVLIN 322 (551)
Q Consensus 252 ~~~~v~~~~~~---~~~~---~--~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~ 322 (551)
+...++++... ..+. . .+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.+++
T Consensus 124 ~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 203 (447)
T 1nhp_A 124 DLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEA 203 (447)
T ss_dssp TSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHT
T ss_pred CCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHh
Confidence 55556655333 2221 2 689999999999999999999999999999999999988 5899999999999987
Q ss_pred CCceEEEeceEEE--e-CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccc
Q 008850 323 PRKIDYHTGVFAT--K-DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVI 398 (551)
Q Consensus 323 ~~gi~~~~~~~~~--~-~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~ 398 (551)
.||+++++..+. . +++...+++ ++ .++++|.|++|+|++|+++++ +.. +.. ++|+|.||+++|
T Consensus 204 -~gv~i~~~~~v~~i~~~~~v~~v~~-~~------~~i~~d~vi~a~G~~p~~~~~--~~~-~~~~~~G~i~Vd~~~~-- 270 (447)
T 1nhp_A 204 -NNITIATGETVERYEGDGRVQKVVT-DK------NAYDADLVVVAVGVRPNTAWL--KGT-LELHPNGLIKTDEYMR-- 270 (447)
T ss_dssp -TTEEEEESCCEEEEECSSBCCEEEE-SS------CEEECSEEEECSCEEESCGGG--TTT-SCBCTTSCBCCCTTCB--
T ss_pred -CCCEEEcCCEEEEEEccCcEEEEEE-CC------CEEECCEEEECcCCCCChHHH--Hhh-hhhcCCCcEEECcccc--
Confidence 899999998766 2 222223444 32 479999999999999998865 344 554 678999999999
Q ss_pred cCCCCCCCcEEEecCCCCC----------CCcHHHHHHHHHHHHHHHcCCCccC-CCCCcceEEEcCCCeeEecCCHHHH
Q 008850 399 DANGNLVPHLYCIGDANGK----------MMLAHAASAQGISVVEQVTGRDHVL-NHLSIPAACFTHPEISMVGLTEPQA 467 (551)
Q Consensus 399 ~~~~t~~~~IyA~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~p~~~~~~~~~~~vG~~e~~a 467 (551)
|+.|+|||+|||+.. +++++.|..||+++|+||+|.+.++ ++..+|++.|++|+++++|+++++|
T Consensus 271 ----t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a 346 (447)
T 1nhp_A 271 ----TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINEVMA 346 (447)
T ss_dssp ----CSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHH
T ss_pred ----CCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEecCCHHHH
Confidence 899999999999863 3689999999999999999875443 3457889999999999999999999
Q ss_pred HhhchhcCCeEEEEEEecccchhhhhc-CCCceEEEEEEeCCCCCCcceeeeeCCC-hhHHHHHHHHHh
Q 008850 468 REKAEKEGFEVSVAKTSFKANTKALAE-NEGEGLAKGVPRNFASSERTNQHSDRPS-KPNLVKKLADVY 534 (551)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kli~~~~~~~~~lg~~~~g~~-~~~~i~~l~~~~ 534 (551)
++. |+++.+.. +..+.++... +++++|+|++++++ +++|||+|++|+. +.++|+.++.+.
T Consensus 347 ~~~----g~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~-~~~ilG~~~~g~~~a~e~i~~~~~ai 408 (447)
T 1nhp_A 347 QKL----GKETKAVT--VVEDYLMDFNPDKQKAWFKLVYDPE-TTQILGAQLMSKADLTANINAISLAI 408 (447)
T ss_dssp HHH----TCCCEEEE--EEEESSCTTCTTCCEEEEEEEECTT-TCBEEEEEEEESSCCTTHHHHHHHHH
T ss_pred HHc----CCceEEEE--EEcCCccccCCCCceEEEEEEEECC-CCEEEEEEEEcCccHHHHHHHHHHHH
Confidence 875 88877654 5666777655 56789999999987 7999999999999 999888776543
No 42
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=5.7e-45 Score=375.41 Aligned_cols=354 Identities=19% Similarity=0.235 Sum_probs=272.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcC--CcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKG--LKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g--~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
++||+|||||+||+++|..|++.| .+|+|||++. +|.|++.++... +. . ..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--------g~~~~~~~l~~~-----------~~-~-------~~ 56 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--------GRSYSKPMLSTG-----------FS-K-------NK 56 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--------CCEECGGGGGGT-----------TT-T-------TC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--------CCccCcccccHH-----------Hh-C-------CC
Confidence 489999999999999999999998 5699999843 455555433210 00 0 00
Q ss_pred CHHHHHHHHHHHHHHHHH-HHHHHHHHcCeEEEece-EEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCc
Q 008850 179 DRQGVADHANNLATKIRN-NLTNSMKALGVDILTGV-GTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGK 254 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~-~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~ 254 (551)
.. .++.. .....++..+++++.+. +..++ .+.|.+++ .++.||+||+|||+.|..|++++.+..
T Consensus 57 ~~-----------~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~i~g~~~~ 124 (384)
T 2v3a_A 57 DA-----------DGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVPVEGDAQD 124 (384)
T ss_dssp CH-----------HHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEECCCCCBSTTTT
T ss_pred CH-----------HHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcCCCCCCCcCcC
Confidence 11 11111 12233456799998764 34443 46787765 479999999999999999887776545
Q ss_pred eeecchhhhccc------cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCCCceE
Q 008850 255 TVITSDHALKLE------FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINPRKID 327 (551)
Q Consensus 255 ~v~~~~~~~~~~------~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~~gi~ 327 (551)
.+++..++.++. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++ .||+
T Consensus 125 ~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~-~gv~ 203 (384)
T 2v3a_A 125 ALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEG-LGVR 203 (384)
T ss_dssp CEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHT-TTCE
T ss_pred CEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHH-cCCE
Confidence 577665554332 24899999999999999999999999999999999999887 488999999999987 8999
Q ss_pred EEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCC
Q 008850 328 YHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNL 404 (551)
Q Consensus 328 ~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~ 404 (551)
++++..+. .+++.+.+++.++ +++++|.|++|+|++|+++++ +..++..++| |.||+++| |+
T Consensus 204 i~~~~~v~~i~~~~~~~~v~~~~g------~~i~~d~vv~a~G~~p~~~l~--~~~g~~~~~g-i~vd~~~~------t~ 268 (384)
T 2v3a_A 204 FHLGPVLASLKKAGEGLEAHLSDG------EVIPCDLVVSAVGLRPRTELA--FAAGLAVNRG-IVVDRSLR------TS 268 (384)
T ss_dssp EEESCCEEEEEEETTEEEEEETTS------CEEEESEEEECSCEEECCHHH--HHTTCCBSSS-EEECTTCB------CS
T ss_pred EEeCCEEEEEEecCCEEEEEECCC------CEEECCEEEECcCCCcCHHHH--HHCCCCCCCC-EEECCCCC------CC
Confidence 99998766 3445566777654 689999999999999998743 5667777778 99999999 89
Q ss_pred CCcEEEecCCCC--C--CCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEEcC-CCeeEecCCHHHHHhhchhcCCeEE
Q 008850 405 VPHLYCIGDANG--K--MMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTH-PEISMVGLTEPQAREKAEKEGFEVS 479 (551)
Q Consensus 405 ~~~IyA~GD~~~--~--~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~-~~~~~vG~~e~~a~~~~~~~~~~~~ 479 (551)
.|+|||+|||+. . ...+..|..||+++|+||+|++.+++|..+|+++|+. +++.++|+++.+ .-...
T Consensus 269 ~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~--------~~~~~ 340 (384)
T 2v3a_A 269 HANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRGM--------DGQWL 340 (384)
T ss_dssp STTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECCTTSCEEEECCCTTC--------CCEEE
T ss_pred CCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCeeEEEecCCCCC--------CceEE
Confidence 999999999984 2 2367889999999999999988788899999999987 589999987631 11111
Q ss_pred EEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHH
Q 008850 480 VAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLAD 532 (551)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~ 532 (551)
..++++||.|++++++ ++|+|++++|+.+.|+++.+..
T Consensus 341 -------------~~~~~~g~~~~~~~~~--~~i~G~~~~g~~a~e~~~~~~~ 378 (384)
T 2v3a_A 341 -------------VEGSGTDLKVLCRDTA--GRVIGYALTGAAVNEKLALNKE 378 (384)
T ss_dssp -------------EEEETTEEEEEEECTT--SCEEEEEEEGGGGGGHHHHHTT
T ss_pred -------------EEecCCcEEEEEEccC--CEEEEEEEECcchHHHHHHHHh
Confidence 1123468999998844 8999999999999998887644
No 43
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.1e-45 Score=372.06 Aligned_cols=331 Identities=19% Similarity=0.240 Sum_probs=248.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCHH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQ 181 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 181 (551)
-||+|||||+||++||..|++.| +|+|||++..++ + ++.++.. ... +. .++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~---~-----~~~~l~~-----------~~~--g~------~~~~ 60 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY---Y-----SKPMLSH-----------YIA--GF------IPRN 60 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC---C-----CSTTHHH-----------HHT--TS------SCGG
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc---c-----ccchhHH-----------HHh--CC------CCHH
Confidence 49999999999999999999999 999999954321 0 1111110 000 00 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCceeec
Q 008850 182 GVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVIT 258 (551)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v~~ 258 (551)
.+.. .....+++.+++++.++ +..++ .+.|. .+++++.||+||||||++|+.|++++. ..+++
T Consensus 61 ~~~~-----------~~~~~~~~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~G~--~~v~~ 126 (367)
T 1xhc_A 61 RLFP-----------YSLDWYRKRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAREPQIKGK--EYLLT 126 (367)
T ss_dssp GGCS-----------SCHHHHHHHTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEECCCCSBTG--GGEEC
T ss_pred Hhcc-----------CCHHHHHhCCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCCCc--CCEEE
Confidence 1100 11123345799999985 56554 45666 566789999999999999998887762 33554
Q ss_pred c---hhhhcccc---CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEece
Q 008850 259 S---DHALKLEF---VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGV 332 (551)
Q Consensus 259 ~---~~~~~~~~---~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~ 332 (551)
+ +++..+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++ +++++.+.+.+.+++ .||+++++.
T Consensus 127 ~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~-~gV~i~~~~ 204 (367)
T 1xhc_A 127 LRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEE-TGVKFFLNS 204 (367)
T ss_dssp CCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHH-TTEEEECSC
T ss_pred EcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHH-CCCEEEcCC
Confidence 4 34433322 358999999999999999999999999999999999999 999999999999987 899999998
Q ss_pred EEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCCCCcEEEe
Q 008850 333 FAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLVPHLYCI 411 (551)
Q Consensus 333 ~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~ 411 (551)
.+. .+.+ .+++.++ + +++|.|++|+|++||++++ +..++..++| |.||+++| |+.|||||+
T Consensus 205 ~v~~i~~~--~v~~~~g------~-i~~D~vi~a~G~~p~~~ll--~~~gl~~~~g-i~Vd~~~~------t~~~~IyA~ 266 (367)
T 1xhc_A 205 ELLEANEE--GVLTNSG------F-IEGKVKICAIGIVPNVDLA--RRSGIHTGRG-ILIDDNFR------TSAKDVYAI 266 (367)
T ss_dssp CEEEECSS--EEEETTE------E-EECSCEEEECCEEECCHHH--HHTTCCBSSS-EECCTTSB------CSSTTEEEC
T ss_pred EEEEEEee--EEEECCC------E-EEcCEEEECcCCCcCHHHH--HhCCCCCCCC-EEECCCcc------cCCCCEEEe
Confidence 877 4333 4666554 5 9999999999999998743 6667776666 99999999 899999999
Q ss_pred cCCCC---C-CCcHHHHHHHHHHHHHHHcCCCccCCCCCcce--EEEcCCCeeEecCCHHHHHhhchhcCCeEEEEEEec
Q 008850 412 GDANG---K-MMLAHAASAQGISVVEQVTGRDHVLNHLSIPA--ACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSF 485 (551)
Q Consensus 412 GD~~~---~-~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~ 485 (551)
|||+. . +++++.|..||+++|+||+|.+.++++ .+|. +.|++|+++++|++|+++ .++
T Consensus 267 GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~~~~vG~~~~~~--------~~~------- 330 (367)
T 1xhc_A 267 GDCAEYSGIIAGTAKAAMEQARVLADILKGEPRRYNF-KFRSTVFKFGKLQIAIIGNTKGEG--------KWI------- 330 (367)
T ss_dssp GGGEEBTTBCCCSHHHHHHHHHHHHHHHTTCCCCCCS-SCCEEEEEETTEEEEEEECCSSCE--------EEE-------
T ss_pred EeeeecCCCCccHHHHHHHHHHHHHHHhcCCCccCCC-CCCceEEEECCceEEEECCCCCCC--------ccc-------
Confidence 99973 2 468999999999999999997665554 3343 579999999999998632 111
Q ss_pred ccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhH
Q 008850 486 KANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPN 525 (551)
Q Consensus 486 ~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~ 525 (551)
++|+|+++++ ++|+|++++|+.+..
T Consensus 331 ------------~~~~k~~~~~---~~ilG~~~~g~~~~~ 355 (367)
T 1xhc_A 331 ------------EDNTKVFYEN---GKIIGAVVFNDIRKA 355 (367)
T ss_dssp ------------ETTEEEEC--------CEEEEESCHHHH
T ss_pred ------------ceEEEEEEEC---CEEEEEEEECChHHH
Confidence 5899999973 699999999997653
No 44
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.9e-41 Score=336.99 Aligned_cols=288 Identities=23% Similarity=0.280 Sum_probs=212.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
.+|||+||||||||++||.+|+++|++|+|||++.+||+|.+.+|+|..+-. ....
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~------------------------~~~~ 60 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGF------------------------EMIT 60 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTC------------------------SSBC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCc------------------------cccc
Confidence 4699999999999999999999999999999999999999999998643210 0011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE---EeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCC---C
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGT---ILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVD---G 253 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~---~ 253 (551)
.. ++.........+.+..+..+... ......+...++.++.||+||||||++|+.|++++.+ +
T Consensus 61 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~ 129 (312)
T 4gcm_A 61 GP-----------DLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGG 129 (312)
T ss_dssp HH-----------HHHHHHHHHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBT
T ss_pred hH-----------HHHHHHHHHHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCC
Confidence 11 12222223344455555554322 2233444556678899999999999999888766643 3
Q ss_pred ceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceE
Q 008850 254 KTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVF 333 (551)
Q Consensus 254 ~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~ 333 (551)
..+.++..+......+|+++|||+|++|+|+|..|++.|.+||++++++++++... ...+.+++ .++.......
T Consensus 130 ~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~ 203 (312)
T 4gcm_A 130 RGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRI-----LQDRAFKN-DKIDFIWSHT 203 (312)
T ss_dssp TTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHH-----HHHHHHHC-TTEEEECSEE
T ss_pred ccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchh-----HHHHHHHh-cCcceeeecc
Confidence 45566655555566789999999999999999999999999999999998876321 12334444 6787777665
Q ss_pred EE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCCCCcEEE
Q 008850 334 AT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLVPHLYC 410 (551)
Q Consensus 334 ~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA 410 (551)
.. ..+.............++...+++|.|++++|.+|+..++ +..++..++|+|.||+++| ||+|||||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~--~~~g~~~~~G~I~vd~~~~------Ts~pgIyA 275 (312)
T 4gcm_A 204 LKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPF--KDLGITNDVGYIVTKDDMT------TSVPGIFA 275 (312)
T ss_dssp EEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--GGGTCBCTTSCBCCCTTSB------CSSTTEEE
T ss_pred eeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhH--HhcceecCCCeEeeCCCCc------cCCCCEEE
Confidence 54 2222222222111223344689999999999999998865 5566777899999999999 89999999
Q ss_pred ecCCCC-CCCcHHHHHHHHHHHHHHHc
Q 008850 411 IGDANG-KMMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 411 ~GD~~~-~~~~~~~A~~~g~~aa~~i~ 436 (551)
+|||++ .+++++.|+.||++||.||.
T Consensus 276 ~GDv~~~~~~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 276 AGDVRDKGLRQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp CSTTBSCSCCSHHHHHHHHHHHHHHHH
T ss_pred EeecCCCcchHHHHHHHHHHHHHHHHH
Confidence 999996 46799999999999999986
No 45
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.7e-42 Score=353.15 Aligned_cols=335 Identities=18% Similarity=0.211 Sum_probs=253.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
+.+|+|||||+||++||..|.+.+.+|+|||++ .++. ..+.-++ .+. +. .+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y----~~~~l~~----------------~l~--g~------~~ 60 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY----YRPRLNE----------------IIA--KN------KS 60 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB----CGGGHHH----------------HHH--SC------CC
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc----ccChhhH----------------HHc--CC------CC
Confidence 468999999999999999997788999999994 3321 0000000 000 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCcee
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTV 256 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v 256 (551)
. +++.......+++.+|+++.++ +..+ +.+.|.+.+++++.||+||||||+.|+.|++++.+ ++
T Consensus 61 ~-----------~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~--~v 127 (385)
T 3klj_A 61 I-----------DDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD--EI 127 (385)
T ss_dssp G-----------GGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCS--CE
T ss_pred H-----------HHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCC--Ce
Confidence 0 0111111233456799999884 5544 45788898888999999999999999998877766 45
Q ss_pred ec---chhhhcccc---CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCCCceEEE
Q 008850 257 IT---SDHALKLEF---VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINPRKIDYH 329 (551)
Q Consensus 257 ~~---~~~~~~~~~---~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~~gi~~~ 329 (551)
++ .+++..+.. .+++++|||+|.+|+|+|..|++.|.+||++++.+++++. +++++.+.+.+.+++ .||+++
T Consensus 128 ~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~-~gV~~~ 206 (385)
T 3klj_A 128 FSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDR-LGIKIY 206 (385)
T ss_dssp ECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHT-TTCEEE
T ss_pred EEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHh-CCCEEE
Confidence 44 444444432 2789999999999999999999999999999999999987 899999999999987 899999
Q ss_pred eceEEEeCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCCCCcEE
Q 008850 330 TGVFATKDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLVPHLY 409 (551)
Q Consensus 330 ~~~~~~~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~Iy 409 (551)
++..+.. + + +++++|.|++++|++|+++++ +..++..++| |.||+++| |+.|+||
T Consensus 207 ~~~~v~~------i----g------~~~~~D~vv~a~G~~p~~~~~--~~~gl~~~~g-i~vd~~~~------t~~~~Iy 261 (385)
T 3klj_A 207 TNSNFEE------M----G------DLIRSSCVITAVGVKPNLDFI--KDTEIASKRG-ILVNDHME------TSIKDIY 261 (385)
T ss_dssp CSCCGGG------C----H------HHHHHSEEEECCCEEECCGGG--TTSCCCBSSS-EEECTTCB------CSSTTEE
T ss_pred eCCEEEE------c----C------eEEecCeEEECcCcccChhhh--hhcCCCcCCC-EEECCCcc------cCCCCEE
Confidence 8865431 1 2 578999999999999999876 5667777777 99999999 8999999
Q ss_pred EecCCCC----CCCcHHHHHHHHHHHHHHHcCCCccCCCCCcceEEE--cCCCeeEecCCHHHHHhhchhcCCeEEEEEE
Q 008850 410 CIGDANG----KMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACF--THPEISMVGLTEPQAREKAEKEGFEVSVAKT 483 (551)
Q Consensus 410 A~GD~~~----~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~--~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~ 483 (551)
|+|||+. .++++..|..||++||+||+|+..+++. .+|++++ ++++++++|+++.+. .+.. ..
T Consensus 262 A~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~--------~~~~-~~- 330 (385)
T 3klj_A 262 ACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASYSE-IIPSPILKVSGISIISCGDIENNK--------PSKV-FR- 330 (385)
T ss_dssp ECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCCCCCCC-CCCCCEEEETTEEEEEESCCTTCC--------CSEE-EE-
T ss_pred EEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCCcCCCC-CCCcEEEEeCCCcEEEEcCCCCCC--------CeEE-EE-
Confidence 9999986 3678999999999999999998765432 2455444 789999999998531 1221 11
Q ss_pred ecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHH
Q 008850 484 SFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNL 526 (551)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~ 526 (551)
......|.|++++. ++++|++++|..+...
T Consensus 331 ----------~~~~~~~~~~~~~~---~~l~g~~~~g~~~~~~ 360 (385)
T 3klj_A 331 ----------STQEDKYIVCMLKE---NKIDAAAVIGDVSLGT 360 (385)
T ss_dssp ----------EECSSCEEEEEEET---TEEEEEEEESCHHHHH
T ss_pred ----------ECCCCeEEEEEEEC---CEEEEEEEECCcHHHH
Confidence 12346899999963 5999999999987654
No 46
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.6e-39 Score=336.92 Aligned_cols=342 Identities=18% Similarity=0.221 Sum_probs=253.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC--cEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGL--KTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAA 176 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 176 (551)
.++||+|||||+||+++|..|++.|. +|+|||++. ++ +..|..++.++.. .. ...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~----~~~~~~~~~~~~~--------------~~---~~~- 63 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP----YDRPPLSKDFMAH--------------GD---AEK- 63 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC----BCSGGGGTHHHHH--------------CC---GGG-
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc----ccCCCCCHHHhCC--------------Cc---hhh-
Confidence 34799999999999999999999997 599999943 22 1111111111100 00 000
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCC-ccCC
Q 008850 177 GYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKG-IEVD 252 (551)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~-~~~~ 252 (551)
. .+. .+++.+++++.++ +..++ .+.|.+.++.++.||+||||||+.|..|++ ++.+
T Consensus 64 -~------------------~~~-~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~ 123 (408)
T 2gqw_A 64 -I------------------RLD-CKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGAT 123 (408)
T ss_dssp -S------------------BCC-CTTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCS
T ss_pred -h------------------hHH-HHHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCC
Confidence 0 000 2334689999986 66554 478888888899999999999999998877 6654
Q ss_pred Cceee---cchhhhccc---cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCCCc
Q 008850 253 GKTVI---TSDHALKLE---FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINPRK 325 (551)
Q Consensus 253 ~~~v~---~~~~~~~~~---~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~~g 325 (551)
.+++ +.+++..+. ..+++++|||+|.+|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++ .|
T Consensus 124 -~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~-~G 201 (408)
T 2gqw_A 124 -MPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAA-QG 201 (408)
T ss_dssp -SCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHH-TT
T ss_pred -CcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHH-cC
Confidence 3443 445554443 24799999999999999999999999999999999999985 899999999999987 89
Q ss_pred eEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCC
Q 008850 326 IDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNL 404 (551)
Q Consensus 326 i~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~ 404 (551)
|+++++..+. .+++ .+++.++ +++++|.|++|+|++|+++++ +..++..++| |.||+++| |+
T Consensus 202 V~i~~~~~v~~i~~~--~v~~~~g------~~i~~D~vi~a~G~~p~~~l~--~~~gl~~~~g-i~Vd~~~~------t~ 264 (408)
T 2gqw_A 202 VDLRFERSVTGSVDG--VVLLDDG------TRIAADMVVVGIGVLANDALA--RAAGLACDDG-IFVDAYGR------TT 264 (408)
T ss_dssp CEEEESCCEEEEETT--EEEETTS------CEEECSEEEECSCEEECCHHH--HHHTCCBSSS-EECCTTCB------CS
T ss_pred cEEEeCCEEEEEECC--EEEECCC------CEEEcCEEEECcCCCccHHHH--HhCCCCCCCC-EEECCCCc------cC
Confidence 9999998777 3333 6677655 689999999999999998754 5566766666 99999999 89
Q ss_pred CCcEEEecCCCCCC----------CcHHHHHHHHHHHHHHHcCCCccCCCCCcceEE--EcCCCeeEecCCHHHHHhhch
Q 008850 405 VPHLYCIGDANGKM----------MLAHAASAQGISVVEQVTGRDHVLNHLSIPAAC--FTHPEISMVGLTEPQAREKAE 472 (551)
Q Consensus 405 ~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~~~vG~~e~~a~~~~~ 472 (551)
.|+|||+|||+..+ .++..|..||+++|+||+|.... +|..+|+++ +.+++++++|+ +.
T Consensus 265 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~p~~~~~~~~~~~~~~G~-~~------- 335 (408)
T 2gqw_A 265 CPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAP-GYAELPWYWSDQGALRIQVAGL-AS------- 335 (408)
T ss_dssp STTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTSC-CCCCCCEEEEEETTEEEEEEEC-SC-------
T ss_pred CCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCCC-cCCCCCeEEEEECCceEEEECC-CC-------
Confidence 99999999998653 26889999999999999987652 566788764 34589999999 21
Q ss_pred hcCCeEEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhH
Q 008850 473 KEGFEVSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPN 525 (551)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~ 525 (551)
..++.+ . .. ......+|.+++.+ + ++|+|++++|..+..
T Consensus 336 --~~~~~~-~----~~----~~~~~~~~~~~~~~-~--~~l~G~~~~g~~~~~ 374 (408)
T 2gqw_A 336 --GDEEIV-R----GE----VSLDAPKFTLIELQ-K--GRIVGATCVNNARDF 374 (408)
T ss_dssp --CSEEEE-E----SC----CCSSSCCEEEEEEE-T--TEEEEEEEESCHHHH
T ss_pred --CCEEEE-E----cc----CCCCCCeEEEEEEe-C--CEEEEEEEECChHHH
Confidence 112211 1 11 00114568777765 4 799999999987643
No 47
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=9.1e-40 Score=341.14 Aligned_cols=353 Identities=17% Similarity=0.188 Sum_probs=256.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--cEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL--KTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
.+||+|||||+||+++|..|++.|+ +|+|||++. ++. ..+..++.++.. .
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~----~~~~l~~~~~~~-----------------~------ 56 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH----HLPPLSKAYLAG-----------------K------ 56 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB----CSGGGGTTTTTT-----------------C------
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCC----cCCCCcHHHhCC-----------------C------
Confidence 4799999999999999999999998 799999842 211 000001111100 0
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCc
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGK 254 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~ 254 (551)
..... +.......+++.+++++.+. +..++ .+.|.+.+++++.||+||+|||+.|+.|++++.+..
T Consensus 57 ~~~~~-----------~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~ 125 (431)
T 1q1r_A 57 ATAES-----------LYLRTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVG 125 (431)
T ss_dssp SCSGG-----------GBSSCHHHHHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTHHH
T ss_pred CChHH-----------hcccCHHHHHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcccC
Confidence 00000 00001123455799999875 44443 468888888889999999999999998876654322
Q ss_pred e---ee---cchhhhccc---cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCCC
Q 008850 255 T---VI---TSDHALKLE---FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINPR 324 (551)
Q Consensus 255 ~---v~---~~~~~~~~~---~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~~ 324 (551)
+ ++ +.+++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++ .
T Consensus 126 ~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~-~ 204 (431)
T 1q1r_A 126 KANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHRE-A 204 (431)
T ss_dssp HSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHH-H
T ss_pred CCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHh-C
Confidence 2 43 445554443 34799999999999999999999999999999999999886 899999999999986 8
Q ss_pred ceEEEeceEEE---e--CCCc-EEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccc
Q 008850 325 KIDYHTGVFAT---K--DGKP-VTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVI 398 (551)
Q Consensus 325 gi~~~~~~~~~---~--~~~~-~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~ 398 (551)
||+++++..+. . +++. ..+++.++ +++++|.|++|+|++|+++++ +..++..++| |.||+++|
T Consensus 205 GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G------~~i~~D~Vv~a~G~~p~~~l~--~~~gl~~~~g-i~Vd~~~~-- 273 (431)
T 1q1r_A 205 GVDIRTGTQVCGFEMSTDQQKVTAVLCEDG------TRLPADLVIAGIGLIPNCELA--SAAGLQVDNG-IVINEHMQ-- 273 (431)
T ss_dssp TCEEECSCCEEEEEECTTTCCEEEEEETTS------CEEECSEEEECCCEEECCHHH--HHTTCCBSSS-EECCTTSB--
T ss_pred CeEEEeCCEEEEEEeccCCCcEEEEEeCCC------CEEEcCEEEECCCCCcCcchh--hccCCCCCCC-EEECCCcc--
Confidence 99999997776 3 2233 36777665 689999999999999998754 5667766666 99999999
Q ss_pred cCCCCCCCcEEEecCCCCCC----------CcHHHHHHHHHHHHHHHcCCCccCCCCCcceEE--EcCCCeeEecCCHHH
Q 008850 399 DANGNLVPHLYCIGDANGKM----------MLAHAASAQGISVVEQVTGRDHVLNHLSIPAAC--FTHPEISMVGLTEPQ 466 (551)
Q Consensus 399 ~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~~~vG~~e~~ 466 (551)
|+.|+|||+|||+..+ ..+..|..||+++|+||+|... +|..+|+++ +.+++++++|+++.
T Consensus 274 ----ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~p~~~~~~~~~~~~~~G~~~~- 346 (431)
T 1q1r_A 274 ----TSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP--RDEAAPWFWSDQYEIGLKMVGLSEG- 346 (431)
T ss_dssp ----CSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC--CCCCCCEEEEEETTEEEEEEECCTT-
T ss_pred ----cCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC--CCCCCCeEEEEECCceEEEEeCCCC-
Confidence 8999999999998653 2578999999999999998764 456688753 23478999999862
Q ss_pred HHhhchhcCCeEEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChhHHHHHHHH
Q 008850 467 AREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKPNLVKKLAD 532 (551)
Q Consensus 467 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~~~i~~l~~ 532 (551)
..++.+ ... .....|++++. ++ ++|+|++++|..+.+.+...+.
T Consensus 347 --------~~~~~~-~~~----------~~~~~~~~~~~-~~--~~l~G~~~~g~~~~~~~~~~~i 390 (431)
T 1q1r_A 347 --------YDRIIV-RGS----------LAQPDFSVFYL-QG--DRVLAVDTVNRPVEFNQSKQII 390 (431)
T ss_dssp --------CSEEEE-EEE----------TTTTEEEEEEE-ET--TEEEEEEEESCHHHHHHHHHHH
T ss_pred --------CCEEEE-Ecc----------CCCCeEEEEEE-eC--CEEEEEEEECChHHHHHHHHHH
Confidence 112221 111 12346766543 34 7999999999998877655544
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.6e-39 Score=336.63 Aligned_cols=346 Identities=22% Similarity=0.273 Sum_probs=256.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCc--EEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLK--TAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAA 176 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~--V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 176 (551)
.++||||||||+||+++|..|++.|++ |+|||++ .++.... .+ ++.++. +.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~---~l-~~~~~~-----------------~~----- 61 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP---PL-SKEYLA-----------------RE----- 61 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG---GG-GTTTTT-----------------TS-----
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc---cC-CHHHHc-----------------CC-----
Confidence 458999999999999999999999987 9999994 3221100 00 000000 00
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEec-eEEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCC
Q 008850 177 GYDRQGVADHANNLATKIRNNLTNSMKALGVDILTG-VGTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDG 253 (551)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~ 253 (551)
... ..+.......+...+++++.+ ++..++ .+.+.+.++.++.||+||||||+.|+.|++++.+.
T Consensus 62 -~~~-----------~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~ 129 (415)
T 3lxd_A 62 -KTF-----------ERICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADL 129 (415)
T ss_dssp -SCS-----------GGGBSSCHHHHHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSCC
T ss_pred -CCH-----------HHhccCCHHHHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCccc
Confidence 000 000001122345579999998 555544 46888888889999999999999999887776655
Q ss_pred ceee---cchhhhccc---cC-CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCCCc
Q 008850 254 KTVI---TSDHALKLE---FV-PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINPRK 325 (551)
Q Consensus 254 ~~v~---~~~~~~~~~---~~-~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~~g 325 (551)
..++ +.+++..+. .. +++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++ .|
T Consensus 130 ~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~-~G 208 (415)
T 3lxd_A 130 AGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRA-HG 208 (415)
T ss_dssp BTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHH-TT
T ss_pred cCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHh-CC
Confidence 5555 344444332 23 899999999999999999999999999999999999885 799999999999987 89
Q ss_pred eEEEeceEEE---eCC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCC
Q 008850 326 IDYHTGVFAT---KDG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDAN 401 (551)
Q Consensus 326 i~~~~~~~~~---~~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~ 401 (551)
|+++++..+. .++ ....+++.++ +++++|.|++|+|++|+++++ +..++..++| |.||+++|
T Consensus 209 V~i~~~~~v~~i~~~~~~v~~v~l~dG------~~i~aD~Vv~a~G~~p~~~l~--~~~gl~~~~g-i~vd~~~~----- 274 (415)
T 3lxd_A 209 VDLRTGAAMDCIEGDGTKVTGVRMQDG------SVIPADIVIVGIGIVPCVGAL--ISAGASGGNG-VDVDEFCR----- 274 (415)
T ss_dssp CEEEETCCEEEEEESSSBEEEEEESSS------CEEECSEEEECSCCEESCHHH--HHTTCCCSSS-EECCTTCB-----
T ss_pred CEEEECCEEEEEEecCCcEEEEEeCCC------CEEEcCEEEECCCCccChHHH--HhCCCCcCCC-EEECCCCC-----
Confidence 9999998776 333 3346787776 689999999999999999764 5667776766 99999999
Q ss_pred CCCCCcEEEecCCCCCCC-----------cHHHHHHHHHHHHHHHcCCCccCCCCCcce--EEEcCCCeeEecCCHHHHH
Q 008850 402 GNLVPHLYCIGDANGKMM-----------LAHAASAQGISVVEQVTGRDHVLNHLSIPA--ACFTHPEISMVGLTEPQAR 468 (551)
Q Consensus 402 ~t~~~~IyA~GD~~~~~~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~~~vG~~e~~a~ 468 (551)
|+.|+|||+|||+..+. +++.|..||++||+||+|+..+ |..+|+ ..+.+..+.++|+++.
T Consensus 275 -t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~--~~~~p~~~~~~~~~~~~~~G~~~~--- 348 (415)
T 3lxd_A 275 -TSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPVP--YKATPWFWSNQYDLKLQTVGLSTG--- 348 (415)
T ss_dssp -CSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCCC--CCCCCEEEEEETTEEEEEEECCTT---
T ss_pred -cCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCCC--CCCCCeeEeeeCCcEEEEEeCCCC---
Confidence 89999999999986543 4789999999999999998654 556775 3445678999999852
Q ss_pred hhchhcCCeEEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChh
Q 008850 469 EKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKP 524 (551)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~ 524 (551)
..++.+ ..+ .....|.+++++. ++++|+..+|....
T Consensus 349 ------~~~~~~-~~~----------~~~~~~~~~~~~~---~~~~g~~~~~~~~~ 384 (415)
T 3lxd_A 349 ------HDNAVL-RGD----------PATRSFSVVYLKG---GKVVALDCVNMVKD 384 (415)
T ss_dssp ------CSEEEE-EEE----------GGGTEEEEEEEET---TEEEEEEEESCHHH
T ss_pred ------CCEEEE-Eec----------CCCCeEEEEEEEC---CEEEEEEEECChHH
Confidence 112221 111 1234688888863 59999999998543
No 49
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.1e-38 Score=319.14 Aligned_cols=292 Identities=22% Similarity=0.261 Sum_probs=213.2
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
+..|||+||||||||++||.+|+++|++|+|||+...||+|.+ +|+|++.+++.. .+++ ...
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~-G~~~~~~~i~~~--------------~g~~---~~i 63 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG-GQLTTTTIIENF--------------PGFP---NGI 63 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT-CGGGGSSEECCS--------------TTCT---TCE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC-CCcCChHHhhhc--------------cCCc---ccC
Confidence 3459999999999999999999999999999999999999987 888876543210 1111 112
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEe----CCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCC--
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTIL----GPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVD-- 252 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~-- 252 (551)
+.. ++...+....++.++++....+... +.+.+.+.++.++.||+||||||+.|+.|++++.+
T Consensus 64 ~~~-----------~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~ 132 (314)
T 4a5l_A 64 DGN-----------ELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKY 132 (314)
T ss_dssp EHH-----------HHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHH
T ss_pred CHH-----------HHHHHHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccc
Confidence 222 2333444556667888887765532 23456677788999999999999999888776643
Q ss_pred -Cceeecchhhhccc--cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEE
Q 008850 253 -GKTVITSDHALKLE--FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYH 329 (551)
Q Consensus 253 -~~~v~~~~~~~~~~--~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~ 329 (551)
...+..+..+.... ..+++++|||+|++|+|+|..|+++|.+||+++|.+.+.. ..+ ...+.... .++..+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~--~~~---~~~~~~~~-~~~~~~ 206 (314)
T 4a5l_A 133 WQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA--SKT---MQERVLNH-PKIEVI 206 (314)
T ss_dssp BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHH---HHHHHHTC-TTEEEE
T ss_pred cccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc--cch---hhhhhhcc-cceeeE
Confidence 23344444444332 4579999999999999999999999999999998876543 222 22333333 677777
Q ss_pred eceEEE----eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCC
Q 008850 330 TGVFAT----KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNL 404 (551)
Q Consensus 330 ~~~~~~----~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~ 404 (551)
...... .+.....+.+.+.. ..+.+++++|.|++++|++||+++++. .+.. ++|+| ||+++| ||
T Consensus 207 ~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~i~~d~vi~a~G~~pn~~~l~~---~~~~~~~G~i-v~~~~~------Ts 275 (314)
T 4a5l_A 207 WNSELVELEGDGDLLNGAKIHNLV-SGEYKVVPVAGLFYAIGHSPNSKFLGG---QVKTADDGYI-LTEGPK------TS 275 (314)
T ss_dssp CSEEEEEEEESSSSEEEEEEEETT-TCCEEEEECSEEEECSCEEESCGGGTT---SSCBCTTSCB-CCBTTB------CS
T ss_pred eeeeeEEEEeeeeccceeEEeecc-cccceeeccccceEecccccChhHhcc---cceEcCCeeE-eCCCCc------cC
Confidence 766554 22333344554432 233468999999999999999998743 2344 67755 899999 89
Q ss_pred CCcEEEecCCCCCC-CcHHHHHHHHHHHHHHHc
Q 008850 405 VPHLYCIGDANGKM-MLAHAASAQGISVVEQVT 436 (551)
Q Consensus 405 ~~~IyA~GD~~~~~-~~~~~A~~~g~~aa~~i~ 436 (551)
+|||||+|||++.+ +++..|+.||+.||.++.
T Consensus 276 ~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 276 VDGVFACGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp STTEEECSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999875 589999999999998874
No 50
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=7.3e-40 Score=339.93 Aligned_cols=343 Identities=22% Similarity=0.253 Sum_probs=253.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCc--EEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLK--TAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~--V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.||+|||||+||+++|..|++.|++ |+|||++ ..+.. .+.-++.++ . ........ .
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~----~~~l~~~~~---------------~-g~~~~~~~-~ 61 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD----RPSLSKAVL---------------D-GSLERPPI-L 61 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC----SGGGGTHHH---------------H-TSSSSCCB-S
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC----CccccHHHh---------------C-CCCCHHHh-c
Confidence 4899999999999999999999987 9999994 32211 000000000 0 00000000 0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEec-eEEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCce
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTG-VGTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKT 255 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~ 255 (551)
.....+.+.+++++.+ ++..++ .+.|.+.+++++.||+||||||+.|+.|++++.+...
T Consensus 62 ------------------~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~ 123 (410)
T 3ef6_A 62 ------------------AEADWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPG 123 (410)
T ss_dssp ------------------SCTTHHHHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTT
T ss_pred ------------------CCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccc
Confidence 0012234579999999 565554 5688888888999999999999999988877655445
Q ss_pred ee---cchhhhccc---cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCCCceEE
Q 008850 256 VI---TSDHALKLE---FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINPRKIDY 328 (551)
Q Consensus 256 v~---~~~~~~~~~---~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~~gi~~ 328 (551)
++ +.+++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++ .||++
T Consensus 124 v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~-~GV~i 202 (410)
T 3ef6_A 124 VVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTE-LGVQV 202 (410)
T ss_dssp EECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHH-HTCEE
T ss_pred eEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHH-CCCEE
Confidence 54 344444332 34799999999999999999999999999999999998875 789999999999987 89999
Q ss_pred EeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCCC
Q 008850 329 HTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLV 405 (551)
Q Consensus 329 ~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~ 405 (551)
+++..+. .++....+++.++ +++++|.|++|+|++|+++++ +..++..++| |.||++++ |+.
T Consensus 203 ~~~~~v~~i~~~~~~~~v~~~dg------~~i~aD~Vv~a~G~~p~~~l~--~~~gl~~~~g-i~vd~~~~------t~~ 267 (410)
T 3ef6_A 203 ELGTGVVGFSGEGQLEQVMASDG------RSFVADSALICVGAEPADQLA--RQAGLACDRG-VIVDHCGA------TLA 267 (410)
T ss_dssp ECSCCEEEEECSSSCCEEEETTS------CEEECSEEEECSCEEECCHHH--HHTTCCBSSS-EECCTTSB------CSS
T ss_pred EeCCEEEEEeccCcEEEEEECCC------CEEEcCEEEEeeCCeecHHHH--HhCCCccCCe-EEEccCee------ECC
Confidence 9998776 3334456788776 689999999999999998764 5667776755 99999999 899
Q ss_pred CcEEEecCCCCCC---------CcHHHHHHHHHHHHHHHcCCCccCCCCCcceEE--EcCCCeeEecCCHHHHHhhchhc
Q 008850 406 PHLYCIGDANGKM---------MLAHAASAQGISVVEQVTGRDHVLNHLSIPAAC--FTHPEISMVGLTEPQAREKAEKE 474 (551)
Q Consensus 406 ~~IyA~GD~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~~~vG~~e~~a~~~~~~~ 474 (551)
|+|||+|||+..+ ..++.|..||++||+||+|+.. +|..+|+++ +.+..+.++|+++..
T Consensus 268 ~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~p~~~~~~~~~~~~~~G~~~~~-------- 337 (410)
T 3ef6_A 268 KGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNV--SAPQLPVSWTEIAGHRMQMAGDIEGP-------- 337 (410)
T ss_dssp TTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCCC--CCCBCCEEEEEETTEEEEEESCSSSS--------
T ss_pred CCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCCC--CCCCCCeeEEEECCceEEEEcCCCCC--------
Confidence 9999999998643 2489999999999999999864 455677543 446789999987631
Q ss_pred CCeEEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChh
Q 008850 475 GFEVSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKP 524 (551)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~ 524 (551)
+ ++. .. .. .....|.+++++ + ++++|++++|....
T Consensus 338 ~-~~~-~~----~~------~~~~~~~~~~~~-~--~~l~g~~~~~~~~~ 372 (410)
T 3ef6_A 338 G-DFV-SR----GM------PGSGAALLFRLQ-E--RRIQAVVAVDAPRD 372 (410)
T ss_dssp S-EEE-EE----SC------TTSSSEEEEEEE-T--TEEEEEEEESCHHH
T ss_pred C-EEE-EE----ee------CCCCeEEEEEEE-C--CEEEEEEEECChHH
Confidence 1 211 11 11 122357777765 3 59999999998553
No 51
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1e-38 Score=330.93 Aligned_cols=344 Identities=21% Similarity=0.235 Sum_probs=253.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--cEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL--KTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.||+|||||+||+++|..|++.|+ +|+|||++. .+... +.-++.++ . ..... ..+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~----~~l~~~~l---------------~-~~~~~--~~~ 59 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQR----PPLSKAYL---------------K-SGGDP--NSL 59 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCS----GGGGTGGG---------------G-SCCCT--TSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCC----ccCCHHHH---------------C-CCCCH--HHc
Confidence 589999999999999999999998 899999943 22110 00000000 0 00000 000
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCcee
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTV 256 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v 256 (551)
.......+...+++++..++..++ .+.+.+.++.++.||+||+|||+.|+.|++++.+...+
T Consensus 60 ----------------~~~~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v 123 (404)
T 3fg2_P 60 ----------------MFRPEKFFQDQAIELISDRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDV 123 (404)
T ss_dssp ----------------BSSCHHHHHHTTEEEECCCEEEEETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTE
T ss_pred ----------------cCCCHHHHHhCCCEEEEEEEEEEECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcE
Confidence 001112344579999886665543 56888888889999999999999999888777655555
Q ss_pred ec---chhhhcc---ccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-CCHHHHHHHHHHHhCCCceEEE
Q 008850 257 IT---SDHALKL---EFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-FDPEIGKLAQRVLINPRKIDYH 329 (551)
Q Consensus 257 ~~---~~~~~~~---~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~~gi~~~ 329 (551)
++ .+++..+ ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.+++ .||+++
T Consensus 124 ~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~-~GV~i~ 202 (404)
T 3fg2_P 124 LYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSG-AGIRMH 202 (404)
T ss_dssp ECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHH-TTCEEE
T ss_pred EEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHh-CCcEEE
Confidence 53 3333332 235799999999999999999999999999999999999885 899999999999987 899999
Q ss_pred eceEEE---e-CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCCC
Q 008850 330 TGVFAT---K-DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLV 405 (551)
Q Consensus 330 ~~~~~~---~-~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~ 405 (551)
++..+. . ++....+++.+| +++++|.||+|+|++|+++++ +..++..++| |.||++++ |+.
T Consensus 203 ~~~~v~~i~~~~~~v~~V~~~dG------~~i~aD~Vv~a~G~~p~~~l~--~~~gl~~~~G-i~vd~~~~------t~~ 267 (404)
T 3fg2_P 203 YGVRATEIAAEGDRVTGVVLSDG------NTLPCDLVVVGVGVIPNVEIA--AAAGLPTAAG-IIVDQQLL------TSD 267 (404)
T ss_dssp CSCCEEEEEEETTEEEEEEETTS------CEEECSEEEECCCEEECCHHH--HHTTCCBSSS-EEECTTSB------CSS
T ss_pred ECCEEEEEEecCCcEEEEEeCCC------CEEEcCEEEECcCCccCHHHH--HhCCCCCCCC-EEECCCcc------cCC
Confidence 997766 2 333445777766 689999999999999999764 5667777777 99999999 899
Q ss_pred CcEEEecCCCCCCC----------cHHHHHHHHHHHHHHHcCCCccCCCCCcce--EEEcCCCeeEecCCHHHHHhhchh
Q 008850 406 PHLYCIGDANGKMM----------LAHAASAQGISVVEQVTGRDHVLNHLSIPA--ACFTHPEISMVGLTEPQAREKAEK 473 (551)
Q Consensus 406 ~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~~~vG~~e~~a~~~~~~ 473 (551)
|+|||+|||+..+. .++.|..||++||+||+|+..+ |..+|+ ..+.+..+.++|++..
T Consensus 268 ~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~--~~~~p~~~~~~~~~~~~~~G~~~~-------- 337 (404)
T 3fg2_P 268 PHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKP--YDGYPWFWSDQGDDKLQIVGLTAG-------- 337 (404)
T ss_dssp TTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCCC--CCCCCEEEEEETTEEEEEEECCTT--------
T ss_pred CCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCCC--CCCCCceEeEECCcEEEEEeCCCC--------
Confidence 99999999985432 4899999999999999998654 556675 3455678999999752
Q ss_pred cCCeEEEEEEecccchhhhhcCCCceEEEEEEeCCCCCCcceeeeeCCChh
Q 008850 474 EGFEVSVAKTSFKANTKALAENEGEGLAKGVPRNFASSERTNQHSDRPSKP 524 (551)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~~lg~~~~g~~~~ 524 (551)
..++.+ ..+ .....|.+++++. ++++|+..+|....
T Consensus 338 -~~~~~~-~~~----------~~~~~~~~~~~~~---~~~~g~~~~~~~~~ 373 (404)
T 3fg2_P 338 -FDQVVI-RGS----------VAERSFSAFCYKA---GKLIGIESVNRAAD 373 (404)
T ss_dssp -CCEEEE-EEE----------TTTTEEEEEEEET---TEEEEEEEESCHHH
T ss_pred -CCEEEE-Eec----------CCCCcEEEEEEEC---CEEEEEEEeCCHHH
Confidence 112221 111 2335788888863 59999999998643
No 52
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=1.9e-36 Score=304.63 Aligned_cols=289 Identities=21% Similarity=0.257 Sum_probs=215.1
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
..++||+|||||++|+++|..|++.|++|+|||+..+||.|.+..++... .+++ ...
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~--------------------~~~~---~~~ 62 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENF--------------------PGFP---EPI 62 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCS--------------------TTCS---SCB
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccC--------------------CCCC---CCC
Confidence 34589999999999999999999999999999998899998765433210 0110 012
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC-----C--cEEEeCcceEEEeCeEEEeCCCCCCCCCCccC
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG-----P--QKVKFGTDNIVTAKDIIIATGSVPFVPKGIEV 251 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----~--~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~ 251 (551)
+.. ++...+...+++.+++++.+.+..++ . +.+.+.++.++.||+||+|||+.|..|++++.
T Consensus 63 ~~~-----------~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~ 131 (325)
T 2q7v_A 63 AGM-----------ELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGE 131 (325)
T ss_dssp CHH-----------HHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTT
T ss_pred CHH-----------HHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCCh
Confidence 222 23333445566679999887765432 2 46666677889999999999999887765554
Q ss_pred C---CceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEE
Q 008850 252 D---GKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDY 328 (551)
Q Consensus 252 ~---~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~ 328 (551)
+ +..++++.........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+ .++.+++ .||++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~~~~---~~~l~~~-~gv~i 205 (325)
T 2q7v_A 132 DNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA--NKVA---QARAFAN-PKMKF 205 (325)
T ss_dssp TTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS--CHHH---HHHHHTC-TTEEE
T ss_pred hhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc--chHH---HHHHHhc-CCceE
Confidence 3 234555544444455679999999999999999999999999999999887643 3332 2333333 79999
Q ss_pred EeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCC
Q 008850 329 HTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNL 404 (551)
Q Consensus 329 ~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~ 404 (551)
+++..+. .+++...+++.+.. +++..++++|.|++|+|++||++++. .. +.. ++|+|.||++++ |+
T Consensus 206 ~~~~~v~~i~~~~~v~~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~l~--~~-~~~~~~g~i~vd~~~~------t~ 275 (325)
T 2q7v_A 206 IWDTAVEEIQGADSVSGVKLRNLK-TGEVSELATDGVFIFIGHVPNTAFVK--DT-VSLRDDGYVDVRDEIY------TN 275 (325)
T ss_dssp ECSEEEEEEEESSSEEEEEEEETT-TCCEEEEECSEEEECSCEEESCGGGT--TT-SCBCTTSCBCCBTTTB------CS
T ss_pred ecCCceEEEccCCcEEEEEEEECC-CCcEEEEEcCEEEEccCCCCChHHHh--hh-cccCCCccEecCCCCc------cC
Confidence 9998877 33333466765311 12224799999999999999998763 33 444 678999999999 89
Q ss_pred CCcEEEecCCCCC-CCcHHHHHHHHHHHHHHHcC
Q 008850 405 VPHLYCIGDANGK-MMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 405 ~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~g 437 (551)
.|||||+|||++. ++++..|..||++||.||..
T Consensus 276 ~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 276 IPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp STTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999986 68999999999999999974
No 53
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.3e-36 Score=305.06 Aligned_cols=286 Identities=21% Similarity=0.273 Sum_probs=217.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
+++||+|||||++|+++|..|++.|++|+|||+. +||.|.+........ ++ ....
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~gg~~~~~~~~~~~~--------------------~~----~~~~ 68 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-PGGQLTEAGIVDDYL--------------------GL----IEIQ 68 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-TTGGGGGCCEECCST--------------------TS----TTEE
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-CCCeecccccccccC--------------------CC----CCCC
Confidence 3589999999999999999999999999999999 999987543221000 00 0011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC----CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCC--
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG----PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDG-- 253 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~-- 253 (551)
. .++...+...+++.+++++...+..++ .+.+.+.++.++.||+||+|||+.|..|++++...
T Consensus 69 ~-----------~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~ 137 (323)
T 3f8d_A 69 A-----------SDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFA 137 (323)
T ss_dssp H-----------HHHHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTB
T ss_pred H-----------HHHHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhc
Confidence 1 233444555566678888886655442 34677777789999999999999988876655433
Q ss_pred -ceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEece
Q 008850 254 -KTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGV 332 (551)
Q Consensus 254 -~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~ 332 (551)
..++...........+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++ +++ .+.+.+++ .||+++.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~---~~~~~~~~-~gv~~~~~~ 211 (323)
T 3f8d_A 138 GRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA--QPI---YVETVKKK-PNVEFVLNS 211 (323)
T ss_dssp TTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS--CHH---HHHHHHTC-TTEEEECSE
T ss_pred CCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc--CHH---HHHHHHhC-CCcEEEeCC
Confidence 45555555444556689999999999999999999999999999999988876 333 33344443 699999998
Q ss_pred EEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCCCcE
Q 008850 333 FAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHL 408 (551)
Q Consensus 333 ~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~I 408 (551)
.+. .+++...+++.+.. .++..++++|.|++++|++|+++++ +..++.. ++|+|.||++++ |+.|||
T Consensus 212 ~v~~i~~~~~~~~v~~~~~~-~g~~~~~~~D~vv~a~G~~p~~~~~--~~~g~~~~~~g~i~vd~~~~------t~~~~v 282 (323)
T 3f8d_A 212 VVKEIKGDKVVKQVVVENLK-TGEIKELNVNGVFIEIGFDPPTDFA--KSNGIETDTNGYIKVDEWMR------TSVPGV 282 (323)
T ss_dssp EEEEEEESSSEEEEEEEETT-TCCEEEEECSEEEECCCEECCHHHH--HHTTCCBCTTSSBCCCTTCB------CSSTTE
T ss_pred EEEEEeccCceeEEEEEECC-CCceEEEEcCEEEEEECCCCChhHH--hhcCeeecCCCcEecCCCce------ecCCCE
Confidence 776 44455567776621 1222479999999999999998755 5566665 789999999999 899999
Q ss_pred EEecCCCCC---CCcHHHHHHHHHHHHHHHc
Q 008850 409 YCIGDANGK---MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 409 yA~GD~~~~---~~~~~~A~~~g~~aa~~i~ 436 (551)
||+|||++. ++++..|+.||++||.||+
T Consensus 283 ya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 283 FAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp EECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred EEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 999999985 7899999999999999986
No 54
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=3.1e-36 Score=301.30 Aligned_cols=288 Identities=22% Similarity=0.230 Sum_probs=217.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEE-eeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAI-IEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~l-iE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.++||+|||||+||+++|..|++.|++|+| ||++.+||.|.+..+++... +++ ...
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~--------------------~~~---~~~ 59 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYP--------------------GVA---QVM 59 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCST--------------------TCC---SCB
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCC--------------------CCC---CCC
Confidence 348999999999999999999999999999 99988999988665432211 000 012
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEe-----CCcEEEe-CcceEEEeCeEEEeCCCCCCCCCCccCC
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTIL-----GPQKVKF-GTDNIVTAKDIIIATGSVPFVPKGIEVD 252 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~v~~-~~g~~i~~d~lVlAtG~~p~~p~~~~~~ 252 (551)
.. .++..++...+++.+++++.+++..+ +.+.+.+ .++ ++.||+||+|||+.|..|++++..
T Consensus 60 ~~-----------~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~ 127 (315)
T 3r9u_A 60 DG-----------ISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGED 127 (315)
T ss_dssp CH-----------HHHHHHHHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTT
T ss_pred CH-----------HHHHHHHHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChh
Confidence 22 23334445566677999998877665 2344313 233 899999999999998887766543
Q ss_pred C---ceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEE
Q 008850 253 G---KTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYH 329 (551)
Q Consensus 253 ~---~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~ 329 (551)
. ..++++.........+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.. +++ .+.+.+++ .||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~---~~~~~~~~-~gv~~~ 201 (315)
T 3r9u_A 128 EFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA--APS---TVEKVKKN-EKIELI 201 (315)
T ss_dssp TTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS--CHH---HHHHHHHC-TTEEEE
T ss_pred hcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC--CHH---HHHHHHhc-CCeEEE
Confidence 3 56667766666667789999999999999999999999999999999887632 443 33445555 899999
Q ss_pred eceEEE---eCC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCC-cccc-ccc-CCCceeeCCCCccccCCC
Q 008850 330 TGVFAT---KDG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGL-ENIN-VVT-QRGFVPVDERMRVIDANG 402 (551)
Q Consensus 330 ~~~~~~---~~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l-~~~~-l~~-~~G~i~Vd~~~~~~~~~~ 402 (551)
++..+. .++ ....+++.. .+++..++++|.|++++|++|+.+++.. +..+ +.. ++|+|.||+++|
T Consensus 202 ~~~~v~~i~~~~~~~~~v~~~~--~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~------ 273 (315)
T 3r9u_A 202 TSASVDEVYGDKMGVAGVKVKL--KDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQ------ 273 (315)
T ss_dssp CSCEEEEEEEETTEEEEEEEEC--TTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCB------
T ss_pred eCcEEEEEEcCCCcEEEEEEEc--CCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcc------
Confidence 998877 222 333466651 1122347999999999999999987653 3455 665 679999999999
Q ss_pred CCCCcEEEecCCCC-CCCcHHHHHHHHHHHHHHHc
Q 008850 403 NLVPHLYCIGDANG-KMMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 403 t~~~~IyA~GD~~~-~~~~~~~A~~~g~~aa~~i~ 436 (551)
|+.|||||+|||++ .++.+..|+.||+.||.+|.
T Consensus 274 t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 274 TSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp CSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 89999999999985 57899999999999999986
No 55
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1e-35 Score=297.25 Aligned_cols=287 Identities=20% Similarity=0.190 Sum_probs=213.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-cEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
+||+|||||++|+++|..|++.|+ +|+|||+..+||.|.+..++... .+++ ...+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~--------------------~~~~---~~~~~ 58 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENY--------------------PGVK---EVVSG 58 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCS--------------------TTCC---SCBCH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccC--------------------CCCc---ccCCH
Confidence 799999999999999999999999 99999998899998765443210 0100 01233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--C--cEEEeCcceEEEeCeEEEeCCCCCCCCCCccCC---C
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--P--QKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVD---G 253 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~--~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~---~ 253 (551)
.. +...+...+.+.+++++.+++..++ . +.+.+.++.++.||+||+|||+.|..|++++.. +
T Consensus 59 ~~-----------~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~ 127 (311)
T 2q0l_A 59 LD-----------FMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWG 127 (311)
T ss_dssp HH-----------HHHHHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBT
T ss_pred HH-----------HHHHHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccC
Confidence 22 3333444556678998887655432 2 356667778899999999999998887765532 3
Q ss_pred ceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceE
Q 008850 254 KTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVF 333 (551)
Q Consensus 254 ~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~ 333 (551)
..+++..........+++++|||+|.+|+|+|..|++.|.+|+++++++++. .++++ .+.+.+..||+++++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~----~~~l~~~~gv~v~~~~~ 201 (311)
T 2q0l_A 128 KGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR--CAPIT----LEHAKNNDKIEFLTPYV 201 (311)
T ss_dssp TTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--SCHHH----HHHHHTCTTEEEETTEE
T ss_pred CcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--CCHHH----HHHHhhCCCeEEEeCCE
Confidence 4455555555545667999999999999999999999999999999988763 34443 33333337999999987
Q ss_pred EE---eC-CCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccc----cccc-CCCceeeCCCCccccCCCCC
Q 008850 334 AT---KD-GKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENI----NVVT-QRGFVPVDERMRVIDANGNL 404 (551)
Q Consensus 334 ~~---~~-~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~----~l~~-~~G~i~Vd~~~~~~~~~~t~ 404 (551)
+. .+ ++...+++.+.. +++..++++|.|++++|++|+++++. .. ++.. ++|+|.||+++| |+
T Consensus 202 v~~i~~~~~~v~~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~l~--~~g~~~~l~~~~~g~i~vd~~~~------t~ 272 (311)
T 2q0l_A 202 VEEIKGDASGVSSLSIKNTA-TNEKRELVVPGFFIFVGYDVNNAVLK--QEDNSMLCKCDEYGSIVVDFSMK------TN 272 (311)
T ss_dssp EEEEEEETTEEEEEEEEETT-TCCEEEEECSEEEECSCEEECCGGGB--CTTSCBSSCBCTTSCBCCCTTCB------CS
T ss_pred EEEEECCCCcEeEEEEEecC-CCceEEEecCEEEEEecCccChhhhh--cccccceeEeccCCCEEeCCccc------cC
Confidence 77 23 222256665310 12224789999999999999988763 33 3555 679999999999 89
Q ss_pred CCcEEEecCCCCC-CCcHHHHHHHHHHHHHHHcC
Q 008850 405 VPHLYCIGDANGK-MMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 405 ~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~g 437 (551)
.|||||+|||++. ++++..|..||++||.||..
T Consensus 273 ~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 273 VQGLFAAGDIRIFAPKQVVCAASDGATAALSVIS 306 (311)
T ss_dssp STTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEcccccCcchHHHHHHHHhHHHHHHHHHH
Confidence 9999999999986 68999999999999999863
No 56
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.5e-35 Score=297.19 Aligned_cols=290 Identities=19% Similarity=0.233 Sum_probs=218.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
..+||+|||||++|+++|..|++.|++|+|||+..+||.|......... .+++ ..+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~--------------------~~~~---~~~~ 60 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENW--------------------PGDP---NDLT 60 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCS--------------------TTCC---SSCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhC--------------------CCCC---CCCC
Confidence 3589999999999999999999999999999998889987654321100 0000 0122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCC----cEEEeCcceEEEeCeEEEeCCCCCCCCCCccC---C
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGP----QKVKFGTDNIVTAKDIIIATGSVPFVPKGIEV---D 252 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~---~ 252 (551)
... +...+...+...+++++.+++..++. +.+ +.++.++.||+||+|||+.|..|++++. .
T Consensus 61 ~~~-----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~ 128 (320)
T 1trb_A 61 GPL-----------LMERMHEHATKFETEIIFDHINKVDLQNRPFRL-NGDNGEYTCDALIIATGASARYLGLPSEEAFK 128 (320)
T ss_dssp HHH-----------HHHHHHHHHHHTTCEEECCCEEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECCCCCHHHHHTB
T ss_pred HHH-----------HHHHHHHHHHHCCCEEEEeeeeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCCCCCCChHHhC
Confidence 222 22333445566799999988665432 344 5566789999999999999888775542 2
Q ss_pred CceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEece
Q 008850 253 GKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGV 332 (551)
Q Consensus 253 ~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~ 332 (551)
+..++++.........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+.+.+.+.+++ .||+++++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~~~~~~~l~~~l~~-~gv~i~~~~ 205 (320)
T 1trb_A 129 GRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA--EKILIKRLMDKVEN-GNIILHTNR 205 (320)
T ss_dssp TTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC--CHHHHHHHHHHHHT-SSEEEECSC
T ss_pred CceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc--CHHHHHHHHHhccc-CCeEEEcCc
Confidence 344555554444446789999999999999999999999999999999887653 67778888888876 899999998
Q ss_pred EEE---eCC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCC-----ccccCCCC
Q 008850 333 FAT---KDG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERM-----RVIDANGN 403 (551)
Q Consensus 333 ~~~---~~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~-----~~~~~~~t 403 (551)
.+. .++ +...+++.+....++.+++++|.|++|+|++|+++++. .++..++|+|.||+++ + |
T Consensus 206 ~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~---~~l~~~~G~i~vd~~~~~~~~~------t 276 (320)
T 1trb_A 206 TLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE---GQLELENGYIKVQSGIHGNATQ------T 276 (320)
T ss_dssp EEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT---TTSCEETTEECCCCSSSSCTTB------C
T ss_pred eeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc---ccccccCceEEECCCccccccc------C
Confidence 877 333 33347776521102336899999999999999998764 2344458999999997 5 8
Q ss_pred CCCcEEEecCCCCC-CCcHHHHHHHHHHHHHHHc
Q 008850 404 LVPHLYCIGDANGK-MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 404 ~~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~ 436 (551)
+.|+|||+|||++. +..+..|..||+.||.+|.
T Consensus 277 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 277 SIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp SSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEcccccCCcchhhhhhhccHHHHHHHHH
Confidence 99999999999986 4789999999999999986
No 57
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2.5e-36 Score=300.91 Aligned_cols=277 Identities=16% Similarity=0.143 Sum_probs=203.3
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCccccc-CCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVN-RGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
+++|||+||||||||++||+.|+++|++|+|||++..||.+.. ...++.. ..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~---------------------------~~ 56 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITR---------------------------DG 56 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTC---------------------------TT
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCC---------------------------CC
Confidence 4569999999999999999999999999999999888886531 1111110 11
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHH-cCeEEEeceEEEe-----CCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKA-LGVDILTGVGTIL-----GPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEV 251 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~-----~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~ 251 (551)
....++. ......+.+ .++.++.+.+... ..+.+.+.+++++.||+||||||++|+.|++++.
T Consensus 57 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~ 125 (304)
T 4fk1_A 57 IKPEEFK-----------EIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNV 125 (304)
T ss_dssp BCHHHHH-----------HHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTH
T ss_pred CCHHHHH-----------HHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCc
Confidence 2222221 111122222 3577777665433 2357788888999999999999999998877653
Q ss_pred ---CCceeecchhhhccccCCceEEEECCChh-HHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceE
Q 008850 252 ---DGKTVITSDHALKLEFVPDWIAIVGSGYI-GLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKID 327 (551)
Q Consensus 252 ---~~~~v~~~~~~~~~~~~~k~v~VvG~G~~-g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~ 327 (551)
.+..++++..+......+++++|||+|.. ++|+|..+.+.+.+|+++.+.+.+. +.+.+.+++ .|+.
T Consensus 126 ~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~--------~~~~~~l~~-~g~~ 196 (304)
T 4fk1_A 126 REYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS--------QTIMDELSN-KNIP 196 (304)
T ss_dssp HHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC--------HHHHHHHHT-TTCC
T ss_pred cccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch--------hhhhhhhhc-ccee
Confidence 34567777777777777888888888764 6889999999999999998876542 234455665 7899
Q ss_pred EEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCC
Q 008850 328 YHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGN 403 (551)
Q Consensus 328 ~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t 403 (551)
++.+.... .++....+++.++ +++++|.++++.|.+|++.++ ++.+++. ++|+|.||+++| |
T Consensus 197 ~~~~~v~~~~~~~~~~~~v~~~~g------~~i~~~~~vi~~g~~~~~~~~--~~~g~~~~~~G~I~vd~~~~------T 262 (304)
T 4fk1_A 197 VITESIRTLQGEGGYLKKVEFHSG------LRIERAGGFIVPTFFRPNQFI--EQLGCELQSNGTFVIDDFGR------T 262 (304)
T ss_dssp EECSCEEEEESGGGCCCEEEETTS------CEECCCEEEECCEEECSSCHH--HHTTCCCCTTSSSCSSTTCB------C
T ss_pred EeeeeEEEeecCCCeeeeeecccc------ceeeecceeeeeccccCChhh--hhcCeEECCCCCEEECcCCc------c
Confidence 98876443 2334456777665 688999888888777776644 5677776 789999999999 8
Q ss_pred CCCcEEEecCCCCC-CCcHHHHHHHHHHHHHHHc
Q 008850 404 LVPHLYCIGDANGK-MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 404 ~~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~ 436 (551)
|+|||||+|||++. +.++..|+.||+.||.+|.
T Consensus 263 s~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 263 SEKNIYLAGETTTQGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp SSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999864 5678999999999998874
No 58
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=2.1e-35 Score=294.94 Aligned_cols=284 Identities=22% Similarity=0.287 Sum_probs=212.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCHH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQ 181 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 181 (551)
+||+|||||++|+++|..|++.|++|+|||+ .+||.|.....++... +. ...+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~-~~gG~~~~~~~~~~~~--------------------~~----~~~~~- 55 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE-RFGGQILDTVDIENYI--------------------SV----PKTEG- 55 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS-STTGGGGGCCEECCBT--------------------TB----SSEEH-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC-CCCceecccccccccc--------------------Cc----CCCCH-
Confidence 7999999999999999999999999999986 5789887543322100 00 01112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEec-eEEEeC-------CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCC-
Q 008850 182 GVADHANNLATKIRNNLTNSMKALGVDILTG-VGTILG-------PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVD- 252 (551)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~-------~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~- 252 (551)
..+...+...+++.+++++.+ ++..++ .+.+.+.++.++.||+||+|||+.|..|++++.+
T Consensus 56 ----------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~ 125 (310)
T 1fl2_A 56 ----------QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQ 125 (310)
T ss_dssp ----------HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTT
T ss_pred ----------HHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhh
Confidence 223334455566789999998 665552 3567777777899999999999998777655432
Q ss_pred --CceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEe
Q 008850 253 --GKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHT 330 (551)
Q Consensus 253 --~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~ 330 (551)
+..++++..+......+++++|||+|++|+|+|..|++.+.+|+++++.+.+. +++. +.+.+++..||++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~----~~~~l~~~~gv~v~~ 199 (310)
T 1fl2_A 126 YRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--ADQV----LQDKLRSLKNVDIIL 199 (310)
T ss_dssp TBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--SCHH----HHHHHHTCTTEEEES
T ss_pred cccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--ccHH----HHHHHhhCCCeEEec
Confidence 34455555544444568999999999999999999999999999999998763 3433 344444436999999
Q ss_pred ceEEE---eCC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCC
Q 008850 331 GVFAT---KDG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLV 405 (551)
Q Consensus 331 ~~~~~---~~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~ 405 (551)
+..+. .++ ....+++.++. .++..++++|.|++|+|++||++++. .. +.. ++|+|.||+++| |+.
T Consensus 200 ~~~v~~i~~~~~~v~~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~l~--~~-l~~~~~g~i~vd~~~~------t~~ 269 (310)
T 1fl2_A 200 NAQTTEVKGDGSKVVGLEYRDRV-SGDIHNIELAGIFVQIGLLPNTNWLE--GA-VERNRMGEIIIDAKCE------TNV 269 (310)
T ss_dssp SEEEEEEEESSSSEEEEEEEETT-TCCEEEEECSEEEECSCEEESCGGGT--TT-SCBCTTSCBCCCTTCB------CSS
T ss_pred CCceEEEEcCCCcEEEEEEEECC-CCcEEEEEcCEEEEeeCCccCchHHh--cc-ccccCCCcEEcCCCCc------cCC
Confidence 98877 332 33357776532 12235799999999999999998663 22 444 678999999999 899
Q ss_pred CcEEEecCCCCCC-CcHHHHHHHHHHHHHHHcC
Q 008850 406 PHLYCIGDANGKM-MLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 406 ~~IyA~GD~~~~~-~~~~~A~~~g~~aa~~i~g 437 (551)
|+|||+|||++.+ +.+..|+.||+.||.+|..
T Consensus 270 ~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 270 KGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp TTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCcchhhhhhHhhHHHHHHHHHH
Confidence 9999999999865 6889999999999999863
No 59
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.8e-35 Score=295.29 Aligned_cols=287 Identities=23% Similarity=0.288 Sum_probs=211.4
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
|..++||+|||||++|+++|..|++.|++|+|||+..+||.|.+..++... .++ ..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~--------------------~~~----~~ 68 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENY--------------------LGF----KS 68 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCB--------------------TTB----SS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhc--------------------CCC----cc
Confidence 334689999999999999999999999999999998889988765433210 000 01
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--C--cEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--P--QKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDG 253 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~--~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~ 253 (551)
.+.. .+...+...+++.+++++.+++..++ . +.|.+ ++.++.||+||+|||+.|..|++++.+.
T Consensus 69 ~~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~ 136 (319)
T 3cty_A 69 IVGS-----------ELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESE 136 (319)
T ss_dssp BCHH-----------HHHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTT
T ss_pred cCHH-----------HHHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHH
Confidence 2222 22233444556679998887665442 2 24555 4568999999999999988877655432
Q ss_pred ---ceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEe
Q 008850 254 ---KTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHT 330 (551)
Q Consensus 254 ---~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~ 330 (551)
..++...........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+ .+.+++ .||+++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~--~~~l----~~~l~~-~gv~i~~ 209 (319)
T 3cty_A 137 YFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC--ENAY----VQEIKK-RNIPYIM 209 (319)
T ss_dssp TBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS--CHHH----HHHHHH-TTCCEEC
T ss_pred hCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC--CHHH----HHHHhc-CCcEEEc
Confidence 34444444444445679999999999999999999999999999999887643 3433 334444 7999999
Q ss_pred ceEEE---eCCC-cEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCCCC
Q 008850 331 GVFAT---KDGK-PVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGNLV 405 (551)
Q Consensus 331 ~~~~~---~~~~-~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~ 405 (551)
+..+. .+++ ...+++.+.. +++..++++|.|++|+|++||++++ +..++.. ++|+|.||++++ |+.
T Consensus 210 ~~~v~~i~~~~~~v~~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~l--~~~gl~~~~~g~i~vd~~~~------t~~ 280 (319)
T 3cty_A 210 NAQVTEIVGDGKKVTGVKYKDRT-TGEEKLIETDGVFIYVGLIPQTSFL--KDSGVKLDERGYIVVDSRQR------TSV 280 (319)
T ss_dssp SEEEEEEEESSSSEEEEEEEETT-TCCEEEECCSEEEECCCEEECCGGG--TTSCCCBCTTSCBCCCTTCB------CSS
T ss_pred CCeEEEEecCCceEEEEEEEEcC-CCceEEEecCEEEEeeCCccChHHH--hhccccccCCccEeCCCCCc------cCC
Confidence 98877 3322 3456665311 1222479999999999999999876 4556665 679999999999 899
Q ss_pred CcEEEecCCCCC-CCcHHHHHHHHHHHHHHHc
Q 008850 406 PHLYCIGDANGK-MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 406 ~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~ 436 (551)
|+|||+|||++. +++++.|+.||++||.||.
T Consensus 281 ~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 281 PGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp TTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 999999999976 5789999999999999986
No 60
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-35 Score=297.04 Aligned_cols=292 Identities=21% Similarity=0.229 Sum_probs=213.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.++||+|||||++|+++|..|++.|++|+|||+ +.+||+|.+. .|++.++... ++ +.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~--~~~~~~~~~~---------------~~----~~~ 62 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL--YPEKYIYDVA---------------GF----PKV 62 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT--CTTSEECCST---------------TC----SSE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc--CCCceeeccC---------------CC----CCC
Confidence 458999999999999999999999999999999 6789988643 3333221100 00 112
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC----CcEEEeCcceEEEeCeEEEeCCCC---CCCCCCcc
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG----PQKVKFGTDNIVTAKDIIIATGSV---PFVPKGIE 250 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~----~~~v~~~~g~~i~~d~lVlAtG~~---p~~p~~~~ 250 (551)
... ++...+...+++.+++++.+. +..++ .+.|.+.++.++.||+||+|||+. |..|++++
T Consensus 63 ~~~-----------~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g 131 (335)
T 2zbw_A 63 YAK-----------DLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPG 131 (335)
T ss_dssp EHH-----------HHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTT
T ss_pred CHH-----------HHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCC
Confidence 222 223334445556688887653 33322 245667777789999999999994 66555444
Q ss_pred CC---Cceeecchhhhcc-ccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCce
Q 008850 251 VD---GKTVITSDHALKL-EFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKI 326 (551)
Q Consensus 251 ~~---~~~v~~~~~~~~~-~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi 326 (551)
.. +..+++. .... ...+++++|||+|.+|+|+|..|.+.|.+|+++++++.+++ .++..+.+.+.+++ .||
T Consensus 132 ~~~~~~~~~~~~--~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--~~~~~~~l~~~l~~-~gv 206 (335)
T 2zbw_A 132 EREFEGRGVYYA--VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--HEASVKELMKAHEE-GRL 206 (335)
T ss_dssp TTTTBTTTEESS--CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--CHHHHHHHHHHHHT-TSS
T ss_pred hhhccCcEEEEe--cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--cHHHHHHHHhcccc-CCe
Confidence 32 2223322 1111 23579999999999999999999999999999999988765 46677788888886 899
Q ss_pred EEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCC
Q 008850 327 DYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGN 403 (551)
Q Consensus 327 ~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t 403 (551)
+++.+..+. .+++...+++.+.. +++.+++++|.|++|+|++|+++++ +..++..++|+|.||+++| |
T Consensus 207 ~v~~~~~v~~i~~~~~~~~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~l--~~~~~~~~~g~i~vd~~~~------t 277 (335)
T 2zbw_A 207 EVLTPYELRRVEGDERVRWAVVFHNQ-TQEELALEVDAVLILAGYITKLGPL--ANWGLALEKNKIKVDTTMA------T 277 (335)
T ss_dssp EEETTEEEEEEEESSSEEEEEEEETT-TCCEEEEECSEEEECCCEEEECGGG--GGSCCCEETTEEECCTTCB------C
T ss_pred EEecCCcceeEccCCCeeEEEEEECC-CCceEEEecCEEEEeecCCCCchHh--hhcceeccCCeeeeCCCCC------C
Confidence 999998776 33333456665210 1123579999999999999998765 5566666689999999999 8
Q ss_pred CCCcEEEecCCCC---CCCcHHHHHHHHHHHHHHHcC
Q 008850 404 LVPHLYCIGDANG---KMMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 404 ~~~~IyA~GD~~~---~~~~~~~A~~~g~~aa~~i~g 437 (551)
+.|||||+|||+. .++++..|..||+++|+||++
T Consensus 278 ~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 278 SIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp SSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 9999999999984 457899999999999999974
No 61
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-35 Score=295.71 Aligned_cols=288 Identities=21% Similarity=0.277 Sum_probs=211.9
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
+..+||+|||||++|+++|..|++.|++|+|||+..+||.|.....+... .+++ ..+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~--------------------~~~~---~~~ 68 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENY--------------------PGFR---NGI 68 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCS--------------------TTCT---TCB
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhc--------------------CCCC---CCC
Confidence 34589999999999999999999999999999998899988653221100 0000 012
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC---CcEE-EeCcceEEEeCeEEEeCCCCCCCCCCccC---
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG---PQKV-KFGTDNIVTAKDIIIATGSVPFVPKGIEV--- 251 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~v-~~~~g~~i~~d~lVlAtG~~p~~p~~~~~--- 251 (551)
.... +...+...+.+.+++++.+++..++ .+.| .+.++.++.||+||+|||+.|..|++++.
T Consensus 69 ~~~~-----------~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~ 137 (335)
T 2a87_A 69 TGPE-----------LMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQEL 137 (335)
T ss_dssp CHHH-----------HHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHT
T ss_pred CHHH-----------HHHHHHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhc
Confidence 2222 2233344455679999988865443 2567 67777889999999999999887765542
Q ss_pred CCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEec
Q 008850 252 DGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTG 331 (551)
Q Consensus 252 ~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~ 331 (551)
.+..++++.........+++++|||+|.+|+|+|..|++.|.+|+++++++.+.. ...+ ..+.+++ .||+++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--~~~~---~~~~~~~-~gV~v~~~ 211 (335)
T 2a87_A 138 LGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--SKIM---LDRARNN-DKIRFLTN 211 (335)
T ss_dssp BTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--CTTH---HHHHHHC-TTEEEECS
T ss_pred cCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--cHHH---HHHHhcc-CCcEEEeC
Confidence 2344555544444445689999999999999999999999999999999887643 2211 2234455 89999999
Q ss_pred eEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCC-CccccCCCCCCC
Q 008850 332 VFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDER-MRVIDANGNLVP 406 (551)
Q Consensus 332 ~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~-~~~~~~~~t~~~ 406 (551)
..+. .+++...+++.+.. +++.+++++|.|++|+|++|+++++. .++.. ++|+|.||++ ++ |+.|
T Consensus 212 ~~v~~i~~~~~~~~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~~~---~~l~~~~~G~i~vd~~~~~------t~~~ 281 (335)
T 2a87_A 212 HTVVAVDGDTTVTGLRVRDTN-TGAETTLPVTGVFVAIGHEPRSGLVR---EAIDVDPDGYVLVQGRTTS------TSLP 281 (335)
T ss_dssp EEEEEEECSSSCCEEEEEEET-TSCCEEECCSCEEECSCEEECCTTTB---TTBCBCTTSCBCCSTTSSB------CSST
T ss_pred ceeEEEecCCcEeEEEEEEcC-CCceEEeecCEEEEccCCccChhHhh---cccccCCCccEEeCCCCCc------cCCC
Confidence 8877 23333345555321 12235799999999999999998763 35555 6899999997 46 8999
Q ss_pred cEEEecCCCCC-CCcHHHHHHHHHHHHHHHc
Q 008850 407 HLYCIGDANGK-MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 407 ~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~ 436 (551)
||||+|||++. ++.+..|..||+.||.+|.
T Consensus 282 ~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 282 GVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp TEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 99999999986 5789999999999999986
No 62
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.1e-35 Score=294.78 Aligned_cols=273 Identities=15% Similarity=0.162 Sum_probs=205.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCc-cCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGC-VPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
++||+|||||++|+++|..|++.|++|+|||+....+.+....+ +|. ....+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~---------------------------~~~~~ 54 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLG---------------------------QDGKA 54 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTT---------------------------CTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcC---------------------------CCCCC
Confidence 37999999999999999999999999999999544333221100 010 01122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CeEEEeceEEEeC----CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccC---
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKAL-GVDILTGVGTILG----PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEV--- 251 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~----~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~--- 251 (551)
. .++...+...+.+. +++++.+++..++ .+.+.+.++.++.||+||+|||+.|..|++++.
T Consensus 55 ~-----------~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~ 123 (297)
T 3fbs_A 55 P-----------GEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRER 123 (297)
T ss_dssp H-----------HHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGG
T ss_pred H-----------HHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhh
Confidence 2 22333344444554 7898888776553 247788888889999999999999887765553
Q ss_pred CCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEec
Q 008850 252 DGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTG 331 (551)
Q Consensus 252 ~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~ 331 (551)
.+..++++.........+++++|||+|++|+|+|..|.+.| +|+++++.+. .+.. .+.+.+++ .||+++.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---~~~~----~~~~~l~~-~gv~i~~- 193 (297)
T 3fbs_A 124 WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---EPDA----DQHALLAA-RGVRVET- 193 (297)
T ss_dssp BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---CCCH----HHHHHHHH-TTCEEEC-
T ss_pred cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---CCCH----HHHHHHHH-CCcEEEc-
Confidence 33556666665555667899999999999999999999999 9999998765 2333 34556665 7999986
Q ss_pred eEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc---CCC-ceeeCCCCccccCCCCCCC
Q 008850 332 VFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT---QRG-FVPVDERMRVIDANGNLVP 406 (551)
Q Consensus 332 ~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~---~~G-~i~Vd~~~~~~~~~~t~~~ 406 (551)
..+. .+++. .+++.++ +++++|.|++++|++|+.+++ +..++.. ++| +|.||++++ |+.|
T Consensus 194 ~~v~~i~~~~-~v~~~~g------~~~~~D~vi~a~G~~p~~~~~--~~~g~~~~~~~~G~~i~vd~~~~------t~~~ 258 (297)
T 3fbs_A 194 TRIREIAGHA-DVVLADG------RSIALAGLFTQPKLRITVDWI--EKLGCAVEEGPMGSTIVTDPMKQ------TTAR 258 (297)
T ss_dssp SCEEEEETTE-EEEETTS------CEEEESEEEECCEEECCCSCH--HHHTCCEEEETTEEEECCCTTCB------CSST
T ss_pred ceeeeeecCC-eEEeCCC------CEEEEEEEEEccCcccCchhH--HhcCCccccCCCCceEEeCCCCc------cCCC
Confidence 5454 33322 6777665 689999999999999998764 5556554 356 899999999 8999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHHHHHHc
Q 008850 407 HLYCIGDANGKMMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 407 ~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 436 (551)
||||+|||++.+++++.|+.||++||.+|.
T Consensus 259 ~vya~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 259 GIFACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp TEEECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 999999999988999999999999999986
No 63
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1e-34 Score=296.40 Aligned_cols=291 Identities=21% Similarity=0.245 Sum_probs=210.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
..+||+|||||++|+++|..|++.|++|+|||+ +.+||.|.+. .|.+.++.. .++ ..+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~--~~~~~~~~~---------------~~~----~~~ 71 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL--YPEKHIYDV---------------AGF----PEV 71 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT--CTTSEECCS---------------TTC----SSE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc--CCCcccccC---------------CCC----CCC
Confidence 458999999999999999999999999999999 6789988643 232221110 000 112
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC-----CcEEEeCcceEEEeCeEEEeCCC---CCCCCCCc
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG-----PQKVKFGTDNIVTAKDIIIATGS---VPFVPKGI 249 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~-----~~~v~~~~g~~i~~d~lVlAtG~---~p~~p~~~ 249 (551)
+.. ++...+...++..+++++.+. +..++ .+.|.+.++.++.||+||+|||+ .|..|+++
T Consensus 72 ~~~-----------~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~ 140 (360)
T 3ab1_A 72 PAI-----------DLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQL 140 (360)
T ss_dssp EHH-----------HHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGG
T ss_pred CHH-----------HHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCC
Confidence 222 233344445566788887763 33321 24677777778999999999999 45555544
Q ss_pred c-C---CCceeecc-hhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCC
Q 008850 250 E-V---DGKTVITS-DHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPR 324 (551)
Q Consensus 250 ~-~---~~~~v~~~-~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~ 324 (551)
+ . .+..++++ .+. ....+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++. ++..+.+.+.+++ .
T Consensus 141 g~~~~~~~~~v~~~~~~~--~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~-~ 215 (360)
T 3ab1_A 141 GNIDHLTGSSVYYAVKSV--EDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--GKTAHEVERARAN-G 215 (360)
T ss_dssp CCCTTTBTTTEESSCSCG--GGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--SHHHHSSHHHHHH-T
T ss_pred CchhhCcCceEEEecCCH--HHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--HHHHHHHHHHhhc-C
Confidence 4 2 22234332 111 1235799999999999999999999999999999999877653 4556666777765 7
Q ss_pred ceEEEeceEEE---eC-CCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccC
Q 008850 325 KIDYHTGVFAT---KD-GKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDA 400 (551)
Q Consensus 325 gi~~~~~~~~~---~~-~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~ 400 (551)
||+++.+..+. .+ +....+++.. .+++.+++++|.|++|+|++|+.+++ +..++..++|+|.||+++|
T Consensus 216 gv~i~~~~~v~~i~~~~~~v~~v~~~~--~~g~~~~i~~D~vi~a~G~~p~~~~l--~~~~~~~~~g~i~vd~~~~---- 287 (360)
T 3ab1_A 216 TIDVYLETEVASIEESNGVLTRVHLRS--SDGSKWTVEADRLLILIGFKSNLGPL--ARWDLELYENALVVDSHMK---- 287 (360)
T ss_dssp SEEEESSEEEEEEEEETTEEEEEEEEE--TTCCEEEEECSEEEECCCBCCSCGGG--GGSSCCEETTEEECCTTSB----
T ss_pred ceEEEcCcCHHHhccCCCceEEEEEEe--cCCCeEEEeCCEEEECCCCCCCHHHH--HhhccccccCeeeecCCCc----
Confidence 99999998776 22 3223556541 11223579999999999999998765 4566666689999999999
Q ss_pred CCCCCCcEEEecCCCC---CCCcHHHHHHHHHHHHHHHcC
Q 008850 401 NGNLVPHLYCIGDANG---KMMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 401 ~~t~~~~IyA~GD~~~---~~~~~~~A~~~g~~aa~~i~g 437 (551)
|+.|||||+|||+. .++++..|..||+++|+||++
T Consensus 288 --t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 288 --TSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp --CSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred --CCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHh
Confidence 89999999999984 467899999999999999974
No 64
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2.8e-34 Score=290.08 Aligned_cols=290 Identities=21% Similarity=0.263 Sum_probs=211.2
Q ss_pred CCCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-----ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCc
Q 008850 97 PKSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-----VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGL 171 (551)
Q Consensus 97 ~~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-----~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~ 171 (551)
+..+++||+|||||++|+++|..|++.|++|+|||+. .+||.|.....+... .++
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~--------------------~~~ 77 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENF--------------------PGF 77 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCS--------------------TTC
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhccc--------------------CCC
Confidence 3345689999999999999999999999999999993 478887653211100 000
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--C--cEEEe---CcceEEEeCeEEEeCCCCCC
Q 008850 172 QVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--P--QKVKF---GTDNIVTAKDIIIATGSVPF 244 (551)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~--~~v~~---~~g~~i~~d~lVlAtG~~p~ 244 (551)
+ ..... .++...+...+++.+++++.+++..++ . ..+.+ +++.++.||+||+|||+.|.
T Consensus 78 ~---~~~~~-----------~~~~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 78 P---DGLTG-----------SELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp T---TCEEH-----------HHHHHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred c---ccCCH-----------HHHHHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 0 00111 234444555666789999998865443 2 23444 35678999999999999988
Q ss_pred CCCCccC---CCceeecchhhhcc--ccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHH
Q 008850 245 VPKGIEV---DGKTVITSDHALKL--EFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRV 319 (551)
Q Consensus 245 ~p~~~~~---~~~~v~~~~~~~~~--~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~ 319 (551)
.|++++. .+..++++..+... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .+.+.+.
T Consensus 144 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~~~~~~~ 217 (338)
T 3itj_A 144 RMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------STIMQKR 217 (338)
T ss_dssp CCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------CHHHHHH
T ss_pred CCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------CHHHHHH
Confidence 7765553 23445555544443 45689999999999999999999999999999999988765 2233344
Q ss_pred HhCCCceEEEeceEEE---eCCC-cEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceee-CC
Q 008850 320 LINPRKIDYHTGVFAT---KDGK-PVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPV-DE 393 (551)
Q Consensus 320 l~~~~gi~~~~~~~~~---~~~~-~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~V-d~ 393 (551)
+.+..||+++++..+. .+++ ...+++.+.. .++.+++++|.|++|+|++|+..++. . ++.. ++|+|.| |+
T Consensus 218 l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~~~--~-~l~~~~~G~i~v~~~ 293 (338)
T 3itj_A 218 AEKNEKIEILYNTVALEAKGDGKLLNALRIKNTK-KNEETDLPVSGLFYAIGHTPATKIVA--G-QVDTDEAGYIKTVPG 293 (338)
T ss_dssp HHHCTTEEEECSEEEEEEEESSSSEEEEEEEETT-TTEEEEEECSEEEECSCEEECCGGGB--T-TBCBCTTSCBCCCTT
T ss_pred HHhcCCeEEeecceeEEEEcccCcEEEEEEEECC-CCceEEEEeCEEEEEeCCCCChhHhh--C-ceEecCCCcEEEcCc
Confidence 4332599999998877 3333 3447776621 12236799999999999999998763 2 6665 6899985 77
Q ss_pred CCccccCCCCCCCcEEEecCCCCC-CCcHHHHHHHHHHHHHHHc
Q 008850 394 RMRVIDANGNLVPHLYCIGDANGK-MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 394 ~~~~~~~~~t~~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~ 436 (551)
+++ |+.|||||+|||+.. ++.+..|+.||+.||.+|.
T Consensus 294 ~~~------t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 294 SSL------TSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp SSB------CSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ccc------cCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 888 899999999999974 6889999999999999986
No 65
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=3.7e-34 Score=288.44 Aligned_cols=287 Identities=21% Similarity=0.268 Sum_probs=211.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
.+||+|||||+||+++|..|++.|++|+|||+ +.+||.|.+ +.|...+... .++ ....
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~--~~~~~~~~~~---------------~~~----~~~~ 65 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA--LYPEKYIYDV---------------AGF----PKIR 65 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH--HCTTSEECCS---------------TTC----SSEE
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh--cCCCceEecc---------------CCC----CCCC
Confidence 47999999999999999999999999999999 789998843 2332221100 000 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--C---CcEEEeCcceEEEeCeEEEeCCC---CCCCCCCcc
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--G---PQKVKFGTDNIVTAKDIIIATGS---VPFVPKGIE 250 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~---~~~v~~~~g~~i~~d~lVlAtG~---~p~~p~~~~ 250 (551)
. .++...+...+++.+++++.+. +..+ + .+.|.+.+++ +.||+||+|||+ .|..|++++
T Consensus 66 ~-----------~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g 133 (332)
T 3lzw_A 66 A-----------QELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELEN 133 (332)
T ss_dssp H-----------HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTT
T ss_pred H-----------HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCC
Confidence 2 3344445555666789988653 3332 2 3477777765 999999999999 777776554
Q ss_pred CC---CceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceE
Q 008850 251 VD---GKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKID 327 (551)
Q Consensus 251 ~~---~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~ 327 (551)
.. +..++. .........+++++|||+|.+|+|+|..|.+.+.+|+++++.+++.+ .+.. .+.+++ .||+
T Consensus 134 ~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-~~~~-----~~~l~~-~gv~ 205 (332)
T 3lzw_A 134 AEQYEGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-HEHS-----VENLHA-SKVN 205 (332)
T ss_dssp GGGGBTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-CHHH-----HHHHHH-SSCE
T ss_pred hhhccCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-cHHH-----HHHHhc-CCeE
Confidence 32 233443 22222223479999999999999999999999999999999988744 2222 223454 7999
Q ss_pred EEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCC
Q 008850 328 YHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNL 404 (551)
Q Consensus 328 ~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~ 404 (551)
++.+..+. .+++...+++.++.. ++.+++++|.|++++|++|+++++ +..++..++|+|.||+++| |+
T Consensus 206 ~~~~~~v~~i~~~~~~~~v~~~~~~~-g~~~~~~~D~vv~a~G~~p~~~~~--~~~~~~~~~g~i~vd~~~~------t~ 276 (332)
T 3lzw_A 206 VLTPFVPAELIGEDKIEQLVLEEVKG-DRKEILEIDDLIVNYGFVSSLGPI--KNWGLDIEKNSIVVKSTME------TN 276 (332)
T ss_dssp EETTEEEEEEECSSSCCEEEEEETTS-CCEEEEECSEEEECCCEECCCGGG--GGSSCCEETTEEECCTTSB------CS
T ss_pred EEeCceeeEEecCCceEEEEEEecCC-CceEEEECCEEEEeeccCCCchHH--hhcCccccCCeEEeCCCCc------ee
Confidence 99998877 333455677776422 234679999999999999998865 5667767889999999999 89
Q ss_pred CCcEEEecCCC---CCCCcHHHHHHHHHHHHHHHcC
Q 008850 405 VPHLYCIGDAN---GKMMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 405 ~~~IyA~GD~~---~~~~~~~~A~~~g~~aa~~i~g 437 (551)
.|||||+|||+ +.++++..|..||++||.+|+.
T Consensus 277 ~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 277 IEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp STTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 99999999998 5678999999999999999973
No 66
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=7.6e-35 Score=308.85 Aligned_cols=317 Identities=19% Similarity=0.191 Sum_probs=218.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHc--CCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAA 176 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 176 (551)
..+||||||||+||++||..|++. |.+|+|||++ .++ +..|.+++.++...... . .......+++....
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~----y~r~~lsk~l~~~~~~~--~--~~~~~~~~~~~~~~ 81 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP----YMRPPLSKELWFSDDPN--V--TKTLRFKQWNGKER 81 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC----BCSGGGGTGGGCC--CT--H--HHHCEEECTTSCEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC----CCCCCCCHHhhcCCccc--h--hhcccccccccccc
Confidence 458999999999999999999887 8899999994 443 23355566665432210 0 00000111110000
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEec-eEEEe--CCcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCC
Q 008850 177 GYDRQGVADHANNLATKIRNNLTNSMKALGVDILTG-VGTIL--GPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDG 253 (551)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~ 253 (551)
.+.+.....+.. ...+. .+...+|+++.+ .+..+ +.+.|.+.+|.++.||+||||||++|+.|++++...
T Consensus 82 ~~~~~~~~~~~~--~~~l~-----~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~ 154 (493)
T 1m6i_A 82 SIYFQPPSFYVS--AQDLP-----HIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAG 154 (493)
T ss_dssp ESBSSCGGGSBC--TTTTT-----TSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSC
T ss_pred cccccchHhhcc--hhhhh-----hhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCccccc
Confidence 000000000000 00000 012468999988 44434 357888888889999999999999998776543211
Q ss_pred ----ceee---cchhhhccc---cCCceEEEECCChhHHHHHHHHHh----CCCeEEEEcccCcCCCC-CCHHHHHHHHH
Q 008850 254 ----KTVI---TSDHALKLE---FVPDWIAIVGSGYIGLEFSDVYTA----LGSEVTFIEALDQLMPG-FDPEIGKLAQR 318 (551)
Q Consensus 254 ----~~v~---~~~~~~~~~---~~~k~v~VvG~G~~g~e~A~~l~~----~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~ 318 (551)
..++ +.+++..+. ..+++++|||+|++|+|+|..|++ .|.+|+++++.+.+++. +++++.+.+.+
T Consensus 155 ~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~ 234 (493)
T 1m6i_A 155 AEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTME 234 (493)
T ss_dssp HHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHH
T ss_pred ccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHH
Confidence 1222 344444333 348999999999999999999987 47899999988776654 78889999999
Q ss_pred HHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccC--CCceeeCC
Q 008850 319 VLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQ--RGFVPVDE 393 (551)
Q Consensus 319 ~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~--~G~i~Vd~ 393 (551)
.+++ .||+++++..+. .+++.+.+++.+| +++++|.|++|+|++||++++ +.+++..+ +|+|.||+
T Consensus 235 ~l~~-~GV~v~~~~~V~~i~~~~~~~~v~l~dG------~~i~aD~Vv~a~G~~pn~~l~--~~~gl~~~~~~ggi~Vd~ 305 (493)
T 1m6i_A 235 KVRR-EGVKVMPNAIVQSVGVSSGKLLIKLKDG------RKVETDHIVAAVGLEPNVELA--KTGGLEIDSDFGGFRVNA 305 (493)
T ss_dssp HHHT-TTCEEECSCCEEEEEEETTEEEEEETTS------CEEEESEEEECCCEEECCTTH--HHHTCCBCTTTCSEECCT
T ss_pred HHHh-cCCEEEeCCEEEEEEecCCeEEEEECCC------CEEECCEEEECCCCCccHHHH--HHcCCccccCCCcEEECC
Confidence 9987 899999998776 2344556777665 689999999999999999865 55666654 58899999
Q ss_pred CCccccCCCCCCCcEEEecCCCCC---------CCcHHHHHHHHHHHHHHHcCCCccCCCCCcce
Q 008850 394 RMRVIDANGNLVPHLYCIGDANGK---------MMLAHAASAQGISVVEQVTGRDHVLNHLSIPA 449 (551)
Q Consensus 394 ~~~~~~~~~t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~ 449 (551)
++| | .|+|||+|||+.. ...+..|..||++||+||+|...+++ ..|+
T Consensus 306 ~l~------t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~~~~--~~~~ 361 (493)
T 1m6i_A 306 ELQ------A-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYW--HQSM 361 (493)
T ss_dssp TCE------E-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCCCCCC--CCCE
T ss_pred Ccc------c-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCCCCcC--CcCc
Confidence 999 5 5999999999853 12467999999999999999765544 4554
No 67
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=5.4e-34 Score=287.64 Aligned_cols=286 Identities=23% Similarity=0.287 Sum_probs=207.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-----CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-----DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVH 174 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-----~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 174 (551)
..+||+|||||++|+++|..|++.|++|+|||+ ..+||.|.....+.. + .+++
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~------------------~--~~~~-- 64 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVEN------------------F--PGFP-- 64 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECC------------------S--TTCT--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecccccc------------------C--CCCc--
Confidence 358999999999999999999999999999998 567777654321100 0 0000
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC----CcEEEeCcceEEEeCeEEEeCCCCCCCCCCcc
Q 008850 175 AAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG----PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIE 250 (551)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~ 250 (551)
..++.. .+...+...+++.+++++.+++..++ .+.|.+ ++.++.||+||+|||+.|..|++++
T Consensus 65 -~~~~~~-----------~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g 131 (333)
T 1vdc_A 65 -EGILGV-----------ELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVG 131 (333)
T ss_dssp -TCEEHH-----------HHHHHHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBT
T ss_pred -cCCCHH-----------HHHHHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCC
Confidence 011222 23333444556679999988754442 235666 6678999999999999988777655
Q ss_pred CCC-------ceeecchhhhccc--cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHh
Q 008850 251 VDG-------KTVITSDHALKLE--FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLI 321 (551)
Q Consensus 251 ~~~-------~~v~~~~~~~~~~--~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~ 321 (551)
... ..++++....... ..+++|+|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+. ...+.++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~~~---~~~~~~~ 206 (333)
T 1vdc_A 132 SGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--SKI---MQQRALS 206 (333)
T ss_dssp CSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHH---HHHHHHT
T ss_pred ccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--cHH---HHHHHHh
Confidence 432 3344444444333 5689999999999999999999999999999999887643 222 2224445
Q ss_pred CCCceEEEeceEEE---eCC---CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCC
Q 008850 322 NPRKIDYHTGVFAT---KDG---KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDER 394 (551)
Q Consensus 322 ~~~gi~~~~~~~~~---~~~---~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~ 394 (551)
+ .||+++++..+. .++ ....+++.+.. .++.+++++|.|++|+|++|+++++. .++.. ++|+|.||++
T Consensus 207 ~-~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~~~---~~l~~~~~G~i~vd~~ 281 (333)
T 1vdc_A 207 N-PKIDVIWNSSVVEAYGDGERDVLGGLKVKNVV-TGDVSDLKVSGLFFAIGHEPATKFLD---GGVELDSDGYVVTKPG 281 (333)
T ss_dssp C-TTEEEECSEEEEEEEESSSSSSEEEEEEEETT-TCCEEEEECSEEEECSCEEESCGGGT---TSSCBCTTSCBCCCTT
T ss_pred C-CCeeEecCCceEEEeCCCCccceeeEEEEecC-CCceEEEecCEEEEEeCCccchHHhh---ccccccCCCCEEechh
Confidence 4 899999998877 333 22346665421 12235799999999999999998763 34554 5899999997
Q ss_pred -CccccCCCCCCCcEEEecCCCCC-CCcHHHHHHHHHHHHHHHc
Q 008850 395 -MRVIDANGNLVPHLYCIGDANGK-MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 395 -~~~~~~~~t~~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~ 436 (551)
++ |+.|+|||+|||++. ++.+..|..||+.||.+|.
T Consensus 282 ~~~------t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 319 (333)
T 1vdc_A 282 TTQ------TSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAE 319 (333)
T ss_dssp SCB------CSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred hcc------cCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHH
Confidence 46 899999999999986 4789999999999999986
No 68
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.1e-33 Score=301.82 Aligned_cols=285 Identities=20% Similarity=0.277 Sum_probs=214.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
..+||+||||||||+++|..|++.|++|+|||+ .+||+|.....++... +. ....
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~-~~GG~~~~~~~~~~~~--------------------~~----~~~~ 265 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE-RFGGQVLDTVDIENYI--------------------SV----PKTE 265 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS-STTGGGTTCSCBCCBT--------------------TB----SSBC
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC-CCCCcccccccccccC--------------------CC----CCCC
Confidence 468999999999999999999999999999997 6799887543332100 00 0112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEec-eEEEeC-------CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTG-VGTILG-------PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEV 251 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~-------~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~ 251 (551)
. .++...+...+++.+++++.+ ++..++ .+.|.+.++.++.||+||+|||+.|..|++++.
T Consensus 266 ~-----------~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~ 334 (521)
T 1hyu_A 266 G-----------QKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGE 334 (521)
T ss_dssp H-----------HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTT
T ss_pred H-----------HHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCCh
Confidence 2 233344455566789999998 565542 456778888889999999999998877665543
Q ss_pred ---CCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEE
Q 008850 252 ---DGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDY 328 (551)
Q Consensus 252 ---~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~ 328 (551)
.+..++++..+......+++|+|||+|++|+|+|..|++.|.+|+++++.+.++. + +.+.+.+++..||++
T Consensus 335 ~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV~v 408 (521)
T 1hyu_A 335 DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--D----QVLQDKVRSLKNVDI 408 (521)
T ss_dssp TTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--C----HHHHHHHTTCTTEEE
T ss_pred hhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--C----HHHHHHHhcCCCcEE
Confidence 3345555554444445689999999999999999999999999999999988764 3 334555554359999
Q ss_pred EeceEEE---eCC-CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccCCCC
Q 008850 329 HTGVFAT---KDG-KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDANGN 403 (551)
Q Consensus 329 ~~~~~~~---~~~-~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t 403 (551)
+++..+. .++ ....+++.+.. .++..++++|.|++++|++||++++. . .+.. ++|+|.||+++| |
T Consensus 409 ~~~~~v~~i~~~~~~v~~v~~~~~~-~g~~~~i~~D~vi~a~G~~pn~~~l~--~-~l~~~~~G~I~Vd~~~~------t 478 (521)
T 1hyu_A 409 ILNAQTTEVKGDGSKVVGLEYRDRV-SGDIHSVALAGIFVQIGLLPNTHWLE--G-ALERNRMGEIIIDAKCE------T 478 (521)
T ss_dssp ECSEEEEEEEECSSSEEEEEEEETT-TCCEEEEECSEEEECCCEEESCGGGT--T-TSCBCTTSCBCCCTTCB------C
T ss_pred EeCCEEEEEEcCCCcEEEEEEEeCC-CCceEEEEcCEEEECcCCCCCchHHh--h-hhccCCCCcEEeCCCCC------C
Confidence 9998877 333 33357776532 12235799999999999999998763 2 2444 679999999999 8
Q ss_pred CCCcEEEecCCCCCC-CcHHHHHHHHHHHHHHHc
Q 008850 404 LVPHLYCIGDANGKM-MLAHAASAQGISVVEQVT 436 (551)
Q Consensus 404 ~~~~IyA~GD~~~~~-~~~~~A~~~g~~aa~~i~ 436 (551)
++|||||+|||++.+ +.+..|+.||+.||.+|.
T Consensus 479 s~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 479 SVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp SSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCCcceeeehHHhHHHHHHHHH
Confidence 999999999999864 689999999999999986
No 69
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=4.9e-35 Score=309.97 Aligned_cols=293 Identities=18% Similarity=0.179 Sum_probs=204.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
+++|||||||+||+++|.+|++.+++|+|||+... ..+ +++++. . .....+.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~---~~~------~PlL~~---------------v----a~G~l~~ 93 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY---FLF------TPLLPS---------------A----PVGTVDE 93 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE---EEC------GGGGGG---------------T----TTTSSCG
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC---ccc------ccchhH---------------H----hhccccH
Confidence 46899999999999999999999999999998421 000 011100 0 0000111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--CcEEEe--------------------CcceEEEeCeEEEe
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--PQKVKF--------------------GTDNIVTAKDIIIA 238 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~~--------------------~~g~~i~~d~lVlA 238 (551)
..+.... ..+ ......+++++.+++..+| .+.|.+ .++.++.||+||||
T Consensus 94 ~~i~~p~----~~~-----~~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViA 164 (502)
T 4g6h_A 94 KSIIEPI----VNF-----ALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISA 164 (502)
T ss_dssp GGGEEEH----HHH-----HTTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEEC
T ss_pred HHhhhhH----HHH-----HHhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEc
Confidence 1000000 000 0112357999998887654 455553 23568999999999
Q ss_pred CCCCCCCCCCccCCC--ceeecchhhhccc--------------------cCCceEEEECCChhHHHHHHHHHhCC----
Q 008850 239 TGSVPFVPKGIEVDG--KTVITSDHALKLE--------------------FVPDWIAIVGSGYIGLEFSDVYTALG---- 292 (551)
Q Consensus 239 tG~~p~~p~~~~~~~--~~v~~~~~~~~~~--------------------~~~k~v~VvG~G~~g~e~A~~l~~~g---- 292 (551)
||+.|..+++++... ..+.+.+++..+. ....+++|||+|++|+|+|.+|.+.+
T Consensus 165 tGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l 244 (502)
T 4g6h_A 165 VGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDL 244 (502)
T ss_dssp CCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTH
T ss_pred CCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHH
Confidence 999998887776432 2223333332211 01247999999999999999987643
Q ss_pred ----------CeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCE
Q 008850 293 ----------SEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDA 361 (551)
Q Consensus 293 ----------~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~ 361 (551)
.+|+++++.+++++.+++++++.+++.|++ .||++++++.+. .+++.+.+...........+++++|.
T Consensus 245 ~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~-~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~ 323 (502)
T 4g6h_A 245 RKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLEN-TSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGT 323 (502)
T ss_dssp HHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHH-TTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSE
T ss_pred HhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHh-cceeeecCceEEEEeCCceEEEEEecCcccceeeeccCE
Confidence 689999999999999999999999999997 999999999988 55555444432211111225799999
Q ss_pred EEEeecCCCCCC--CCCCccccccc-CCCceeeCCCCccccCCCCCCCcEEEecCCCC--CCCcHHHHHHHHHHHHHHHc
Q 008850 362 ALIATGRAPFTN--GLGLENINVVT-QRGFVPVDERMRVIDANGNLVPHLYCIGDANG--KMMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 362 vi~a~G~~p~~~--~l~l~~~~l~~-~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~--~~~~~~~A~~~g~~aa~~i~ 436 (551)
||||+|.+|+.. .+. ...++.. ++|+|.||++||+ ++.|||||+|||+. .|++++.|.+||+++|+||.
T Consensus 324 viwa~Gv~~~~~~~~l~-~~~~~~~~~~g~I~Vd~~lq~-----~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~ 397 (502)
T 4g6h_A 324 LIWATGNKARPVITDLF-KKIPEQNSSKRGLAVNDFLQV-----KGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFD 397 (502)
T ss_dssp EEECCCEECCHHHHHHH-HHSGGGTTCCSSEEBCTTSBB-----TTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHH
T ss_pred EEEccCCcCCHHHHhHH-HhccccccCCCceeECCcccc-----CCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHH
Confidence 999999999842 111 2233443 6789999999996 68999999999974 46899999999999999996
Q ss_pred C
Q 008850 437 G 437 (551)
Q Consensus 437 g 437 (551)
+
T Consensus 398 ~ 398 (502)
T 4g6h_A 398 K 398 (502)
T ss_dssp H
T ss_pred H
Confidence 3
No 70
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=3.2e-33 Score=284.32 Aligned_cols=298 Identities=20% Similarity=0.240 Sum_probs=197.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc-c
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG-Y 178 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~ 178 (551)
++||+|||||++|+++|..|+++|++|+|||+ +.+||.|.+. .|...+..... ...+..+..+..... .
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 73 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA--WHSLHLFSPAG-------WSSIPGWPMPASQGPYP 73 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS--CTTCBCSSCGG-------GSCCSSSCCCCCSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC--CCCcEecCchh-------hhhCCCCCCCCCccCCC
Confidence 48999999999999999999999999999999 6899998752 33222111100 000011111111111 1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CC--cE-EEeCcceEEEeCeEEEeCCC--CCCCCCCcc
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GP--QK-VKFGTDNIVTAKDIIIATGS--VPFVPKGIE 250 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~--~~-v~~~~g~~i~~d~lVlAtG~--~p~~p~~~~ 250 (551)
.. ..+...+...+++.+++++.++ +..+ +. +. |.++++ ++.||+||+|||. .|..|++++
T Consensus 74 ~~-----------~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g 141 (357)
T 4a9w_A 74 AR-----------AEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQG 141 (357)
T ss_dssp BH-----------HHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTT
T ss_pred CH-----------HHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCC
Confidence 22 2333444556666789988764 3322 22 34 666666 8999999999995 566666544
Q ss_pred ---CCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEccc-CcCCCCC--CHHHHHHHHHHHhCC-
Q 008850 251 ---VDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL-DQLMPGF--DPEIGKLAQRVLINP- 323 (551)
Q Consensus 251 ---~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~~--~~~~~~~~~~~l~~~- 323 (551)
+.+..+++..........+++|+|||+|.+|+|+|..|++.+ +|+++.++ +.+++.. ..++.+.+.+.+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (357)
T 4a9w_A 142 LESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQ 220 (357)
T ss_dssp GGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC---------
T ss_pred ccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccc
Confidence 333445555444444456799999999999999999999998 69999988 5666642 344444333333220
Q ss_pred --------------------------CceEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCC
Q 008850 324 --------------------------RKIDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLG 376 (551)
Q Consensus 324 --------------------------~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~ 376 (551)
.++ +.....+. .+.+ .+++.++ +++++|.|++|+|++|+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~--~v~~~~g------~~i~~D~vi~a~G~~p~~~~l- 290 (357)
T 4a9w_A 221 EGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPT--GMQWADG------TERAFDAVIWCTGFRPALSHL- 290 (357)
T ss_dssp -------------CBCCCHHHHHHHHTTC-CCEECCCSEEETT--EEECTTS------CEEECSEEEECCCBCCCCGGG-
T ss_pred cccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCC--eeEECCC------CEecCCEEEECCCcCCCCccc-
Confidence 111 11111111 1111 2555454 689999999999999998876
Q ss_pred CcccccccCCCceeeCCC--CccccCCCCCCCcEEEec--CCCC-CCCcHHHHHHHHHHHHHHHcC
Q 008850 377 LENINVVTQRGFVPVDER--MRVIDANGNLVPHLYCIG--DANG-KMMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 377 l~~~~l~~~~G~i~Vd~~--~~~~~~~~t~~~~IyA~G--D~~~-~~~~~~~A~~~g~~aa~~i~g 437 (551)
+..++..++|+|.||++ ++ |+.|||||+| ||++ .+.....|..||+++|++|..
T Consensus 291 -~~~gl~~~~G~i~vd~~~l~~------t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 291 -KGLDLVTPQGQVEVDGSGLRA------LAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp -TTTTCBCTTSCBCBCTTSCBB------SSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHH
T ss_pred -CcccccCCCCCccccCCcccC------CCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHH
Confidence 56677778899999999 67 8999999999 6665 467788899999999999874
No 71
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=4.3e-34 Score=326.69 Aligned_cols=309 Identities=16% Similarity=0.191 Sum_probs=215.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC-cEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
..+||+||||||||++||..|++.|+ +|+|||+ +.+||.+.+ ++|...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~--~ip~~~---------------------------- 235 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTS--EIPQFR---------------------------- 235 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHH--TSCTTT----------------------------
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccc--cCCccc----------------------------
Confidence 35799999999999999999999999 7999999 678987531 222211
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCC-CCCCCCCc-cCC-Cc
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGS-VPFVPKGI-EVD-GK 254 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~-~p~~p~~~-~~~-~~ 254 (551)
... .+.......+++.||+++.++.. ..+.++++++.++.||+||||||+ .|+.+++. +.. ..
T Consensus 236 ~~~------------~~~~~~~~~~~~~gv~~~~~~~v--~~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~ 301 (1025)
T 1gte_A 236 LPY------------DVVNFEIELMKDLGVKIICGKSL--SENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQ 301 (1025)
T ss_dssp SCH------------HHHHHHHHHHHTTTCEEEESCCB--STTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTT
T ss_pred CCH------------HHHHHHHHHHHHCCcEEEcccEe--ccceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCC
Confidence 000 11112234556789999988743 223455555556789999999999 48766542 332 23
Q ss_pred eeecchhhhc----------------cccCCceEEEECCChhHHHHHHHHHhCCC-eEEEEcccC-cCCCCCCHHHHHHH
Q 008850 255 TVITSDHALK----------------LEFVPDWIAIVGSGYIGLEFSDVYTALGS-EVTFIEALD-QLMPGFDPEIGKLA 316 (551)
Q Consensus 255 ~v~~~~~~~~----------------~~~~~k~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~-~~l~~~~~~~~~~~ 316 (551)
++++..+++. +...+++|+|||||++|+|+|..+.+.|. +||++++++ .+++.++.++.
T Consensus 302 gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~~--- 378 (1025)
T 1gte_A 302 GFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVE--- 378 (1025)
T ss_dssp TEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHHH---
T ss_pred CEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHHH---
Confidence 5776555432 12346899999999999999999999996 899999988 56777766542
Q ss_pred HHHHhCCCceEEEeceEEE---e-CCCcEEEEEecccC---------CCCCeEEecCEEEEeecCCCCCCCCCCcccccc
Q 008850 317 QRVLINPRKIDYHTGVFAT---K-DGKPVTIELIDAKT---------KEPKDTLEVDAALIATGRAPFTNGLGLENINVV 383 (551)
Q Consensus 317 ~~~l~~~~gi~~~~~~~~~---~-~~~~~~v~~~~g~~---------~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~ 383 (551)
.+++ .||+++.+..+. . ++....+++.+... .++..++++|.||+|+|++|+...+..+..++.
T Consensus 379 --~~~~-~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~ 455 (1025)
T 1gte_A 379 --LAKE-EKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIK 455 (1025)
T ss_dssp --HHHH-TTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSC
T ss_pred --HHHH-cCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCce
Confidence 3344 699999887665 2 23333355432100 011247899999999999875432311224566
Q ss_pred c-CCCceeeCC-CCccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCC---ccCCCCCcceEEEcCCCee
Q 008850 384 T-QRGFVPVDE-RMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRD---HVLNHLSIPAACFTHPEIS 458 (551)
Q Consensus 384 ~-~~G~i~Vd~-~~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~---~~~~~~~~p~~~~~~~~~~ 458 (551)
. ++|+|.||+ ++| |+.|+|||+|||++.+.++..|+.||+.||.+|.+.- ...++..+|.+.|+.|+++
T Consensus 456 ~~~~G~I~vd~~~~~------Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~ 529 (1025)
T 1gte_A 456 FNRWDLPEVDPETMQ------TSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVD 529 (1025)
T ss_dssp BCTTSSBCCCTTTCB------CSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGG
T ss_pred ECCCCCEEECCCCCc------cCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccccc
Confidence 5 589999997 799 8999999999999988999999999999999998421 1234445666667777666
Q ss_pred EecCCH
Q 008850 459 MVGLTE 464 (551)
Q Consensus 459 ~vG~~e 464 (551)
.++++.
T Consensus 530 ~v~ls~ 535 (1025)
T 1gte_A 530 LVDISV 535 (1025)
T ss_dssp GCCCCE
T ss_pred ccccee
Confidence 655543
No 72
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=6.6e-34 Score=297.51 Aligned_cols=280 Identities=17% Similarity=0.213 Sum_probs=197.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
..+||+||||||||+++|..|++.|++|+|||+ +.+||.+.+. +|... .
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g--ip~~~----------------------------~ 170 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG--IPGFK----------------------------L 170 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT--SCTTT----------------------------S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec--CCCcc----------------------------C
Confidence 357999999999999999999999999999999 6788865321 12100 1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCC-CCCCCCccCCCceee
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSV-PFVPKGIEVDGKTVI 257 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~-p~~p~~~~~~~~~v~ 257 (551)
+ ..+.......++..||+++.++.. . +.+.+++. .+.||+||||||+. |+.+++++.+..+++
T Consensus 171 ~------------~~~~~~~~~~l~~~gv~~~~~~~v--~-~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~ 234 (456)
T 2vdc_G 171 E------------KSVVERRVKLLADAGVIYHPNFEV--G-RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLGNIV 234 (456)
T ss_dssp C------------HHHHHHHHHHHHHTTCEEETTCCB--T-TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTTTEE
T ss_pred C------------HHHHHHHHHHHHHCCcEEEeCCEe--c-cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCCCcE
Confidence 1 112222334566789999988632 1 22333333 36799999999997 666666665545565
Q ss_pred cchhhhc------------------cccCCceEEEECCChhHHHHHHHHHhCCC-eEEEEcccCcC-CCCCCHHHHHHHH
Q 008850 258 TSDHALK------------------LEFVPDWIAIVGSGYIGLEFSDVYTALGS-EVTFIEALDQL-MPGFDPEIGKLAQ 317 (551)
Q Consensus 258 ~~~~~~~------------------~~~~~k~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~-l~~~~~~~~~~~~ 317 (551)
+..+++. ....+|+|+|||+|++|+|+|..+.+.|. +|++++|++.+ ++..+.++
T Consensus 235 ~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~----- 309 (456)
T 2vdc_G 235 AALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREV----- 309 (456)
T ss_dssp EHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHH-----
T ss_pred EHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHH-----
Confidence 5432211 12457999999999999999999999997 59999998876 66655442
Q ss_pred HHHhCCCceEEEeceEEE---eCCCcEEEEEe---------cccC-----CCCCeEEecCEEEEeecCCCCCCCCCCccc
Q 008850 318 RVLINPRKIDYHTGVFAT---KDGKPVTIELI---------DAKT-----KEPKDTLEVDAALIATGRAPFTNGLGLENI 380 (551)
Q Consensus 318 ~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~---------~g~~-----~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~ 380 (551)
+.+++ .||+++++..+. .++....+++. +|.. .++..++++|.||+|+|+.|++..+-++..
T Consensus 310 ~~~~~-~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~ 388 (456)
T 2vdc_G 310 AHAEE-EGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEP 388 (456)
T ss_dssp HHHHH-TTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHST
T ss_pred HHHHH-CCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccC
Confidence 23444 689998886544 22211112221 1100 112357999999999999998752112455
Q ss_pred cccc-CCCceeeCCC-CccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcC
Q 008850 381 NVVT-QRGFVPVDER-MRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 381 ~l~~-~~G~i~Vd~~-~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 437 (551)
++.. ++|+|.||++ ++ |+.|+|||+|||+..+.++..|+.||+.||.+|.+
T Consensus 389 gl~~~~~G~i~vd~~~~~------Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 389 ELKVTRWGTLLVDHRTKM------TNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp TSCBCTTSSBCCCTTTCB------CSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeeECCCCCEEECCCCCc------CCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHH
Confidence 6665 6899999998 88 89999999999998889999999999999999873
No 73
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2e-32 Score=280.18 Aligned_cols=308 Identities=16% Similarity=0.174 Sum_probs=204.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-cEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcc-cccccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQ-VHAAGY 178 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~ 178 (551)
++||+|||||++|+++|..|++.|+ +|+|||+..+||+|.++... ..+... ......+|+. ......
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~---~~~~~~--------~~~~~~~g~~~~~~~~~ 72 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKS---TRTITP--------SFTSNGFGMPDMNAISM 72 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTT---CBCSSC--------CCCCGGGTCCCTTCSST
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCccc---ccccCc--------chhcccCCchhhhhccc
Confidence 4899999999999999999999999 99999995599998764321 100000 0000112210 000000
Q ss_pred CH-HHHHHHHH-HHHHHHHHHHHHHHHHcCeEEEece-EEEeC----CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccC
Q 008850 179 DR-QGVADHAN-NLATKIRNNLTNSMKALGVDILTGV-GTILG----PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEV 251 (551)
Q Consensus 179 ~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~----~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~ 251 (551)
+. ..+..... .....+...+...+++.+++++.++ +..++ .+.|.+.++ ++.||+||+|||+.+. |.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~ip~- 149 (369)
T 3d1c_A 73 DTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF-PKKPF- 149 (369)
T ss_dssp TCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS-BCCCS-
T ss_pred cccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cCCCC-
Confidence 00 00000000 0012333444555667899998875 43332 356766665 6899999999998754 33222
Q ss_pred CCceeecchhhhcccc-CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-------CCHHHHHHHHHHHhCC
Q 008850 252 DGKTVITSDHALKLEF-VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-------FDPEIGKLAQRVLINP 323 (551)
Q Consensus 252 ~~~~v~~~~~~~~~~~-~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~~~~~~~~~~~~l~~~ 323 (551)
+ .+++...+..... .+++|+|||+|.+|+|+|..|.+.|.+|+++++++.+++. +++...+.+.+.+++
T Consensus 150 -~-~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~- 226 (369)
T 3d1c_A 150 -K-YGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQ- 226 (369)
T ss_dssp -S-SCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHT-
T ss_pred -C-ceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhh-
Confidence 2 2344444443333 4579999999999999999999999999999999887742 456777888888886
Q ss_pred Cc-eEEEeceEEE-e--CCCcEEEEEecccCCCCCeEE-ecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccc
Q 008850 324 RK-IDYHTGVFAT-K--DGKPVTIELIDAKTKEPKDTL-EVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVI 398 (551)
Q Consensus 324 ~g-i~~~~~~~~~-~--~~~~~~v~~~~g~~~~~~~~i-~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~ 398 (551)
.| |+++++..+. . +++...+++.+| +++ .+|.|++|+|++|+++.+ .+.++..++|+|.||++++.
T Consensus 227 ~g~v~~~~~~~v~~i~~~~~~~~v~~~~g------~~~~~~d~vi~a~G~~~~~~~~--~~~~~~~~~g~i~v~~~~~~- 297 (369)
T 3d1c_A 227 GARIEMNVHYTVKDIDFNNGQYHISFDSG------QSVHTPHEPILATGFDATKNPI--VQQLFVTTNQDIKLTTHDES- 297 (369)
T ss_dssp TCCEEEECSCCEEEEEEETTEEEEEESSS------CCEEESSCCEECCCBCGGGSHH--HHHHSCCTTSCCCBCTTSBB-
T ss_pred CCcEEEecCcEEEEEEecCCceEEEecCC------eEeccCCceEEeeccCCccchh--hhhhccCCCCCEEechhhcc-
Confidence 76 9999987776 2 455566777665 334 579999999999998655 23334457888999987543
Q ss_pred cCCCCCCCcEEEecCCCCCCC----cHHHHHHHHHHHHHHHcCC
Q 008850 399 DANGNLVPHLYCIGDANGKMM----LAHAASAQGISVVEQVTGR 438 (551)
Q Consensus 399 ~~~~t~~~~IyA~GD~~~~~~----~~~~A~~~g~~aa~~i~g~ 438 (551)
|+.|+|||+|||+..+. ....+.+||+++|++|.++
T Consensus 298 ----t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~ 337 (369)
T 3d1c_A 298 ----TRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQR 337 (369)
T ss_dssp ----SSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHH
T ss_pred ----cCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcc
Confidence 89999999999986532 3456788999999999874
No 74
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.98 E-value=1.1e-31 Score=280.90 Aligned_cols=286 Identities=19% Similarity=0.226 Sum_probs=201.7
Q ss_pred cccEEEECCChHHHHHHHHHHH---cCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVE---KGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~---~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
+.||||||||++|+++|..|++ .|++|+|||+... ....|....+. .+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~------~~~~~~~~~~~----------------~g~------ 55 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY------FQFVPSNPWVG----------------VGW------ 55 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE------EECGGGHHHHH----------------HTS------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC------CcccCCccccc----------------cCc------
Confidence 3699999999999999999999 7999999999431 00111110000 000
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCC--
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDG-- 253 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~-- 253 (551)
.+. +++...+...+++.+|+++.+++..++ .+.|.+++++++.||+||+|||+.|..|++++...
T Consensus 56 ~~~-----------~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~ 124 (437)
T 3sx6_A 56 KER-----------DDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHE 124 (437)
T ss_dssp SCH-----------HHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCSTTT
T ss_pred cCH-----------HHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCccc
Confidence 111 122222344556689999998887664 45888888888999999999999988776655442
Q ss_pred -c--eeecchhhhcccc------CCceEEEECCChhH------HHHH----HHHHhCCCe-----EEEEcccCcCC----
Q 008850 254 -K--TVITSDHALKLEF------VPDWIAIVGSGYIG------LEFS----DVYTALGSE-----VTFIEALDQLM---- 305 (551)
Q Consensus 254 -~--~v~~~~~~~~~~~------~~k~v~VvG~G~~g------~e~A----~~l~~~g~~-----Vtlv~~~~~~l---- 305 (551)
. .+.+.+++..+.. .+++++|||+|+.+ +|+| ..+++.|.+ |+++++.+.+.
T Consensus 125 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l 204 (437)
T 3sx6_A 125 GPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGI 204 (437)
T ss_dssp SSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTT
T ss_pred CcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCcccccccc
Confidence 2 2344444443321 14567889986654 8877 666677764 99999998763
Q ss_pred CCCCHHHHHHHHHHHhCCCceEEEeceEEE-eCCCcEEEEEecccCCCC---CeEEecCEEEEeecCCCCCCCCCCcccc
Q 008850 306 PGFDPEIGKLAQRVLINPRKIDYHTGVFAT-KDGKPVTIELIDAKTKEP---KDTLEVDAALIATGRAPFTNGLGLENIN 381 (551)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~---~~~i~~D~vi~a~G~~p~~~~l~l~~~~ 381 (551)
+.+. +..+.+.+.+++ .||+++++..+. .+++.+.++..+. +++ ++++++|.+++++|++|+.... +..+
T Consensus 205 ~~~~-~~~~~~~~~l~~-~gI~~~~~~~v~~v~~~~v~~~~~~~--~g~~~~~~~i~~D~vv~~~g~~~~~~~~--~~~g 278 (437)
T 3sx6_A 205 QGVG-DSKGILTKGLKE-EGIEAYTNCKVTKVEDNKMYVTQVDE--KGETIKEMVLPVKFGMMIPAFKGVPAVA--GVEG 278 (437)
T ss_dssp TCCT-THHHHHHHHHHH-TTCEEECSEEEEEEETTEEEEEEECT--TSCEEEEEEEECSEEEEECCEECCHHHH--TSTT
T ss_pred Ccch-HHHHHHHHHHHH-CCCEEEcCCEEEEEECCeEEEEeccc--CCccccceEEEEeEEEEcCCCcCchhhh--cccc
Confidence 3333 477888888886 899999999888 4455444432111 111 3679999999999988875432 2245
Q ss_pred cccCCCceeeCCCCccccCCCCCCCcEEEecCCCCC------------CCcHHHHHHHHHHHHHHHc
Q 008850 382 VVTQRGFVPVDERMRVIDANGNLVPHLYCIGDANGK------------MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 382 l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 436 (551)
+..++|+|.||+++|+ +++|||||+|||+.. |++++.|..||+++|+||.
T Consensus 279 l~~~~G~i~Vd~~l~t-----~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 279 LCNPGGFVLVDEHQRS-----KKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp TBCTTSCBCBCTTSBB-----SSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEeChhccC-----CCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 5558899999999995 589999999999863 5689999999999999997
No 75
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.98 E-value=5.2e-32 Score=283.58 Aligned_cols=281 Identities=15% Similarity=0.161 Sum_probs=199.1
Q ss_pred cccEEEECCChHHHHHHHHHHH-c------CCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVE-K------GLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQ 172 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~-~------g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~ 172 (551)
.+||+||||||||+++|..|++ . |++|+|||+ +.+||.|. .+|.|.+...
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~-~gv~p~~~~~--------------------- 60 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR-SGVAPDHPKI--------------------- 60 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH-HTSCTTCTGG---------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc-cccCCCCCCH---------------------
Confidence 4799999999999999999999 7 999999999 67888874 4665543211
Q ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCC-CCCCCCccC
Q 008850 173 VHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSV-PFVPKGIEV 251 (551)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~-p~~p~~~~~ 251 (551)
+++...+...+++.+++++.+.. ++ +.|.++++ ++.||+||||||+. |..|++++.
T Consensus 61 -------------------~~~~~~~~~~~~~~~v~~~~~v~--v~-~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~ 117 (456)
T 1lqt_A 61 -------------------KSISKQFEKTAEDPRFRFFGNVV--VG-EHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGE 117 (456)
T ss_dssp -------------------GGGHHHHHHHHTSTTEEEEESCC--BT-TTBCHHHH-HHHSSEEEECCCCCEECCCCCTTT
T ss_pred -------------------HHHHHHHHHHHhcCCCEEEeeEE--EC-CEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCC
Confidence 01112223344567899887732 22 34555444 47899999999997 677666665
Q ss_pred CCceeecchhhh-----------ccc-cCCceEEEECCChhHHHHHHHHHhC--------------------C-CeEEEE
Q 008850 252 DGKTVITSDHAL-----------KLE-FVPDWIAIVGSGYIGLEFSDVYTAL--------------------G-SEVTFI 298 (551)
Q Consensus 252 ~~~~v~~~~~~~-----------~~~-~~~k~v~VvG~G~~g~e~A~~l~~~--------------------g-~~Vtlv 298 (551)
+..+++++.++. .+. ..+++|+|||+|++|+|+|..|.+. | .+|+++
T Consensus 118 ~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv 197 (456)
T 1lqt_A 118 DLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIV 197 (456)
T ss_dssp TSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEE
T ss_pred CCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEE
Confidence 544577665542 222 2479999999999999999999974 5 599999
Q ss_pred cccCcCCCCCCH-------------------HH------------------HHHHHHHHhCC-----CceEEEeceEEE-
Q 008850 299 EALDQLMPGFDP-------------------EI------------------GKLAQRVLINP-----RKIDYHTGVFAT- 335 (551)
Q Consensus 299 ~~~~~~l~~~~~-------------------~~------------------~~~~~~~l~~~-----~gi~~~~~~~~~- 335 (551)
.|++.+...|.+ ++ .+.+.+.+++. .||+++++..+.
T Consensus 198 ~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~ 277 (456)
T 1lqt_A 198 GRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIE 277 (456)
T ss_dssp CSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEE
T ss_pred ecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeE
Confidence 998876554432 11 23344444432 689999998877
Q ss_pred --eCCCcEEEEEeccc------------CCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCceeeCCCCccccC
Q 008850 336 --KDGKPVTIELIDAK------------TKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVPVDERMRVIDA 400 (551)
Q Consensus 336 --~~~~~~~v~~~~g~------------~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~Vd~~~~~~~~ 400 (551)
.++....+++.+.. ..++.++++||.|++++|++|+. + .++.. ++|+|.||+++|+
T Consensus 278 i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~--l----~gl~~d~~g~i~vn~~~rv--- 348 (456)
T 1lqt_A 278 IKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP--T----PGLPFDDQSGTIPNVGGRI--- 348 (456)
T ss_dssp EECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC--C----TTSCCBTTTTBCCEETTEE---
T ss_pred EecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC--C----CCCcccCCCCeeECCCCcC---
Confidence 23333235554200 01122579999999999999987 2 13344 5688999999997
Q ss_pred CCCCCCcEEEecCCCCCCC-cHHHHHHHHHHHHHHHcC
Q 008850 401 NGNLVPHLYCIGDANGKMM-LAHAASAQGISVVEQVTG 437 (551)
Q Consensus 401 ~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~g 437 (551)
|+.|||||+|||+..|. .+..|+.+|..+|.+|++
T Consensus 349 --t~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 349 --NGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp --TTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHH
T ss_pred --CCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 78999999999986554 577899999999999974
No 76
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=2.8e-30 Score=271.66 Aligned_cols=296 Identities=18% Similarity=0.164 Sum_probs=196.8
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCc---EEEeeC-CccCcccccC---CccCCh----hhHhhHHHHHHHHhhhhhh
Q 008850 102 YDLIIIGAGVGGHGAALHAVE---KGLK---TAIIEG-DVVGGTCVNR---GCVPSK----ALLAVSGRMRELQSEHHMK 167 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~---~g~~---V~liE~-~~~GG~~~~~---g~~p~~----~~~~~~~~~~~~~~~~~~~ 167 (551)
+||+|||||++|+++|..|++ .|++ |+|||+ +.+||+|.+. +|.|.. ...+.............+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 999999 6899999863 343311 0000000000000000000
Q ss_pred hcCcccc-----ccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeE--EEece-EEEe---C---CcEEEeCc---c--e
Q 008850 168 ALGLQVH-----AAGYDRQGVADHANNLATKIRNNLTNSMKALGVD--ILTGV-GTIL---G---PQKVKFGT---D--N 228 (551)
Q Consensus 168 ~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~-~~~~---~---~~~v~~~~---g--~ 228 (551)
.+.++.. ....+...+.+ ++...+++.+++ +..++ +..+ + .+.|++.+ + .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~-----------~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~ 151 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWD-----------YIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIY 151 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHH-----------HHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHH-----------HHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceE
Confidence 1111000 11123333333 334444455665 55553 2222 1 24666644 3 5
Q ss_pred EEEeCeEEEeCC--CCCCCCCCccCCC--ceeecchhhhcc-ccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 229 IVTAKDIIIATG--SVPFVPKGIEVDG--KTVITSDHALKL-EFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 229 ~i~~d~lVlAtG--~~p~~p~~~~~~~--~~v~~~~~~~~~-~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
++.||+||+||| +.|+.|++++.+. ..++++.++... ...+|+|+|||+|.+|+|+|..|++.|.+|+++++++.
T Consensus 152 ~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 152 SEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp EEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred EEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 789999999999 7898887666432 124444444333 34689999999999999999999999999999999888
Q ss_pred CCCCCCHHHHHHHHHHHhCCCceEEEeceEEEeCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccc
Q 008850 304 LMPGFDPEIGKLAQRVLINPRKIDYHTGVFATKDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVV 383 (551)
Q Consensus 304 ~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~ 383 (551)
+++.. + . .||+++....- .+++ .|++.+| +++++|.||+|||++|+.+++. +..++.
T Consensus 232 ~~~~~-----------~-~-~~V~~~~~V~~-i~~~--~V~~~dG------~~i~~D~Vi~atG~~p~~~~l~-~~~gl~ 288 (464)
T 2xve_A 232 PMGYK-----------W-P-ENWDERPNLVR-VDTE--NAYFADG------SSEKVDAIILCTGYIHHFPFLN-DDLRLV 288 (464)
T ss_dssp CCCCC-----------C-C-TTEEECSCEEE-ECSS--EEEETTS------CEEECSEEEECCCBCCCCTTBC-TTTCCC
T ss_pred CCCCC-----------C-C-CceEEcCCeEE-EeCC--EEEECCC------CEEeCCEEEECCCCCCCCCCcC-cccccc
Confidence 76531 1 1 57888733222 3333 4677766 5789999999999999999875 345666
Q ss_pred cCCC-ceeeCCC---CccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCCC
Q 008850 384 TQRG-FVPVDER---MRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRD 439 (551)
Q Consensus 384 ~~~G-~i~Vd~~---~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 439 (551)
.+++ ++ +|.+ ++ |+.|+|||+|||... .....|..||++++++|.|+.
T Consensus 289 ~~~~~~v-~~~~~~~~~------t~~p~i~aiGd~~~~-~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 289 TNNRLWP-LNLYKGVVW------EDNPKFFYIGMQDQW-YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp CCSSSCC-SSEETTTEE------SSSTTEEECSCSCCS-SCHHHHHHHHHHHHHHHTTSS
T ss_pred cCCCccc-ccccceEec------CCCCCEEEEeCcccc-cchHHHHHHHHHHHHHHcCCC
Confidence 6443 55 4433 44 789999999999875 578999999999999999863
No 77
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=4.6e-31 Score=276.70 Aligned_cols=280 Identities=16% Similarity=0.159 Sum_probs=195.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcC--CcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKG--LKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g--~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
.+||+|||||++|+++|..|++.| ++|+|||+ +.+||.| +.+|.|.+...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~-~~g~~p~~~~~-------------------------- 58 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV-RFGVAPDHPEV-------------------------- 58 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH-HHTSCTTCGGG--------------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee-ecccCCCCccH--------------------------
Confidence 379999999999999999999998 99999999 5677765 44555543211
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCC-CCCCCccCCCcee
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVP-FVPKGIEVDGKTV 256 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p-~~p~~~~~~~~~v 256 (551)
+.+...+...+++.+++++.+... . +.|.+.+ .++.||+||||||+.| +.|++++.+..++
T Consensus 59 --------------~~~~~~~~~~~~~~gv~~~~~~~v--~-~~V~~~~-~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv 120 (460)
T 1cjc_A 59 --------------KNVINTFTQTARSDRCAFYGNVEV--G-RDVTVQE-LQDAYHAVVLSYGAEDHQALDIPGEELPGV 120 (460)
T ss_dssp --------------GGHHHHHHHHHTSTTEEEEBSCCB--T-TTBCHHH-HHHHSSEEEECCCCCEECCCCCTTTTSTTE
T ss_pred --------------HHHHHHHHHHHHhCCcEEEeeeEE--e-eEEEecc-ceEEcCEEEEecCcCCCCCCCCCCCCCCcE
Confidence 111222344556678998877532 1 2344443 2468999999999995 7777777666667
Q ss_pred ecchhhhc----------cc--cCCceEEEECCChhHHHHHHHHH--------------------hCCC-eEEEEcccCc
Q 008850 257 ITSDHALK----------LE--FVPDWIAIVGSGYIGLEFSDVYT--------------------ALGS-EVTFIEALDQ 303 (551)
Q Consensus 257 ~~~~~~~~----------~~--~~~k~v~VvG~G~~g~e~A~~l~--------------------~~g~-~Vtlv~~~~~ 303 (551)
+++.++.. +. ..+++++|||+|++|+|+|..|+ +.+. +|+++.|++.
T Consensus 121 ~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 121 FSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp EEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred EEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 77755521 11 24799999999999999999999 5676 7999999876
Q ss_pred C--------------CCCC-------------------CHH---HHHHHHHHHhC-------------CCceEEEeceEE
Q 008850 304 L--------------MPGF-------------------DPE---IGKLAQRVLIN-------------PRKIDYHTGVFA 334 (551)
Q Consensus 304 ~--------------l~~~-------------------~~~---~~~~~~~~l~~-------------~~gi~~~~~~~~ 334 (551)
+ ++.. +.. ..+.+.+.+++ ..||+++++..+
T Consensus 201 ~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~ 280 (460)
T 1cjc_A 201 LQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSP 280 (460)
T ss_dssp GGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEE
T ss_pred HhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCCh
Confidence 5 2321 110 22333333332 168999999877
Q ss_pred E---eC--C-CcEEEEEecccC-----------CCCCeEEecCEEEEeecCCCCCCCCCCccccc-cc-CCCceeeCCCC
Q 008850 335 T---KD--G-KPVTIELIDAKT-----------KEPKDTLEVDAALIATGRAPFTNGLGLENINV-VT-QRGFVPVDERM 395 (551)
Q Consensus 335 ~---~~--~-~~~~v~~~~g~~-----------~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l-~~-~~G~i~Vd~~~ 395 (551)
. .+ + ....+++.+... .++.+++++|.|++++|++|+.. .++ .. ++|+|.||+++
T Consensus 281 ~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l------~gl~~~d~~g~i~vn~~~ 354 (460)
T 1cjc_A 281 QQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI------DPSVPFDPKLGVVPNMEG 354 (460)
T ss_dssp EEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC------CTTSCCBTTTTBCCEETT
T ss_pred heEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC------CCCcccccCCCeeECCCC
Confidence 6 23 2 333455432100 11225799999999999999972 244 44 56789999999
Q ss_pred ccccCCCCC-CCcEEEecCCCCCCC-cHHHHHHHHHHHHHHHcC
Q 008850 396 RVIDANGNL-VPHLYCIGDANGKMM-LAHAASAQGISVVEQVTG 437 (551)
Q Consensus 396 ~~~~~~~t~-~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~g 437 (551)
| |+ .|+|||+|||+..+. .+..|+.+|+.+|.+|++
T Consensus 355 r------t~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 355 R------VVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp E------ETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred c------CcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHH
Confidence 9 55 799999999986554 578999999999999974
No 78
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=5.3e-31 Score=273.50 Aligned_cols=278 Identities=18% Similarity=0.230 Sum_probs=200.9
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVE---KGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~---~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
.||+|||||++|+++|..|++ .|++|+|||+. .++... +.+... .+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~----~~~~~~-------------------~~~------ 52 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRP----ALPHVA-------------------IGV------ 52 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECC----SSCCCC-------------------SSC------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceecc----chhhcc-------------------cCC------
Confidence 489999999999999999999 89999999994 332211 111000 000
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--CcEEEeCcce----EEEeCeEEEeCCCCCCCCCCccC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--PQKVKFGTDN----IVTAKDIIIATGSVPFVPKGIEV 251 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~~~~g~----~i~~d~lVlAtG~~p~~p~~~~~ 251 (551)
.+. +++...+...+++.+++++.+++..++ .+.|.+.++. ++.||+||+|||+.|..|++++.
T Consensus 53 ~~~-----------~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~ 121 (409)
T 3h8l_A 53 RDV-----------DELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGW 121 (409)
T ss_dssp CCC-----------CCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTH
T ss_pred cCH-----------HHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCCh
Confidence 000 001111223344579999998776554 4577776543 49999999999999887765554
Q ss_pred C--Cceeecchhhhccc----cCCceEEEECCCh-------------------------hHHHHH----HHHHhCC----
Q 008850 252 D--GKTVITSDHALKLE----FVPDWIAIVGSGY-------------------------IGLEFS----DVYTALG---- 292 (551)
Q Consensus 252 ~--~~~v~~~~~~~~~~----~~~k~v~VvG~G~-------------------------~g~e~A----~~l~~~g---- 292 (551)
. ...+.+.++...+. ...++++|||+|. .++|+| ..+.+.|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~ 201 (409)
T 3h8l_A 122 DKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDK 201 (409)
T ss_dssp HHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTT
T ss_pred hhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCC
Confidence 3 22334444443332 2235677999992 467777 4556777
Q ss_pred CeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCC
Q 008850 293 SEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPF 371 (551)
Q Consensus 293 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~ 371 (551)
.+|+++++.+ +++.+++++.+.+.+.+++ .||+++++..+. .+++. +++.++ +++++|.|++++|++|+
T Consensus 202 ~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~-~gV~~~~~~~v~~i~~~~--v~~~~g------~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 202 VHVTVFSPGE-YLSDLSPNSRKAVASIYNQ-LGIKLVHNFKIKEIREHE--IVDEKG------NTIPADITILLPPYTGN 271 (409)
T ss_dssp EEEEEECSSS-SSTTBCHHHHHHHHHHHHH-HTCEEECSCCEEEECSSE--EEETTS------CEEECSEEEEECCEECC
T ss_pred eEEEEEeCCc-cccccCHHHHHHHHHHHHH-CCCEEEcCCceEEECCCe--EEECCC------CEEeeeEEEECCCCCcc
Confidence 4899999988 8888999999999999987 899999998877 44443 666665 68999999999999998
Q ss_pred CCCCCCccc--ccccCCCceeeCCCCccccCCCCCCCcEEEecCCCC--CCCcHHHHHHHHHHHHHHHcC
Q 008850 372 TNGLGLENI--NVVTQRGFVPVDERMRVIDANGNLVPHLYCIGDANG--KMMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 372 ~~~l~l~~~--~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~--~~~~~~~A~~~g~~aa~~i~g 437 (551)
.. + ... ++..++|+|.||+++|+ ++.|||||+|||+. .++++..|..||+++|+||.+
T Consensus 272 ~~-l--~~~~~~l~~~~G~i~vd~~~~~-----~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 272 PA-L--KNSTPDLVDDGGFIPTDLNMVS-----IKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp HH-H--HTSCGGGSCTTSCBCBBTTSBB-----SSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred HH-H--HhccccCcCCCCCEEeCccccc-----CCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 53 3 344 55457899999999995 58999999999986 478999999999999999974
No 79
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.97 E-value=5.7e-31 Score=274.63 Aligned_cols=284 Identities=16% Similarity=0.192 Sum_probs=190.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcC--CcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKG--LKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g--~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
.+|||||||+||+++|.+|++++ ++|+|||++.. ..+.|....+ . .|. .+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~------~~~~p~l~~v--~--------------~g~------~~ 54 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY------FGFTPAFPHL--A--------------MGW------RK 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE------EECGGGHHHH--H--------------HTC------SC
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC------CccCccHHHH--h--------------cCC------CC
Confidence 47999999999999999999875 78999998431 0111211000 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCC--Cce
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVD--GKT 255 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~--~~~ 255 (551)
.+ ++...+...+++.||+++.+++..+| .++|++++|+++.||+||||||+.+. +++++.. ...
T Consensus 55 ~~-----------~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~i~G~~e~~~~ 122 (430)
T 3hyw_A 55 FE-----------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAEGQEENSTS 122 (430)
T ss_dssp GG-----------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CCSBTHHHHSCC
T ss_pred HH-----------HhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-CCccCcccCcCC
Confidence 00 00001112334569999999988665 57899999999999999999999864 3344322 223
Q ss_pred eecchhhhcccc------CCceEEEECCCh------hHHHHH----HHHHhCC----CeEEEEcccCcCC---CCCCHHH
Q 008850 256 VITSDHALKLEF------VPDWIAIVGSGY------IGLEFS----DVYTALG----SEVTFIEALDQLM---PGFDPEI 312 (551)
Q Consensus 256 v~~~~~~~~~~~------~~k~v~VvG~G~------~g~e~A----~~l~~~g----~~Vtlv~~~~~~l---~~~~~~~ 312 (551)
+.+.+++..+.+ ..+.++|+|++. .+.|++ ..+.+.+ .+|++++..+.+. +...+..
T Consensus 123 ~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~ 202 (430)
T 3hyw_A 123 ICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGAS 202 (430)
T ss_dssp CSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTH
T ss_pred cccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHH
Confidence 445555543321 134455665542 223444 4455555 5789998776543 2356677
Q ss_pred HHHHHHHHhCCCceEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc-CCCcee
Q 008850 313 GKLAQRVLINPRKIDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT-QRGFVP 390 (551)
Q Consensus 313 ~~~~~~~l~~~~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~-~~G~i~ 390 (551)
.+.+++.+++ +||+++++..+. .+++.+.++..+ ++.+++++|.++|++|.+|+.... .....+.. .+|+|.
T Consensus 203 ~~~l~~~l~~-~GV~~~~~~~v~~v~~~~~~~~~~~----g~~~~i~~d~vi~~~G~~~~~~~~-~~~~~l~~~~~g~i~ 276 (430)
T 3hyw_A 203 KRLVEDLFAE-RNIDWIANVAVKAIEPDKVIYEDLN----GNTHEVPAKFTMFMPSFQGPEVVA-SAGDKVANPANKMVI 276 (430)
T ss_dssp HHHHHHHHHH-TTCEEECSCEEEEECSSEEEEECTT----SCEEEEECSEEEEECEEECCHHHH-TTCTTTBCTTTCCBC
T ss_pred HHHHHHHHHh-CCeEEEeCceEEEEeCCceEEEeeC----CCceEeecceEEEeccCCCchHHH-hcccccccCCceEEE
Confidence 8888888887 899999999988 555554444322 234689999999999999974321 11222333 567899
Q ss_pred eCCCCccccCCCCCCCcEEEecCCCC------------CCCcHHHHHHHHHHHHHHHc
Q 008850 391 VDERMRVIDANGNLVPHLYCIGDANG------------KMMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 391 Vd~~~~~~~~~~t~~~~IyA~GD~~~------------~~~~~~~A~~~g~~aa~~i~ 436 (551)
||+++|+ |++|||||+|||+. .|++++.|.+||+++|+||+
T Consensus 277 vd~~lq~-----t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 277 VNRCFQN-----PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp CCTTSBC-----SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ecccccC-----CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 9999997 89999999999974 25789999999999999997
No 80
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=8.1e-31 Score=290.07 Aligned_cols=280 Identities=19% Similarity=0.215 Sum_probs=197.5
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
...+||+|||||+||++||..|+++|++|+|||+ +.+||+|.+..++|.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~---------------------------- 438 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLG---------------------------- 438 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCG----------------------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChH----------------------------
Confidence 3458999999999999999999999999999999 78999987666655432
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCC--------CCCCCCc
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSV--------PFVPKGI 249 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~--------p~~p~~~ 249 (551)
++..+.++.....+.+. .....++++..+ +.+.++++.++.||+||||||+. |..|+++
T Consensus 439 -~~~~~~~~~~~~i~~~~-----~~~~~~v~i~~~-------~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ip 505 (729)
T 1o94_A 439 -EWSYHRDYRETQITKLL-----KKNKESQLALGQ-------KPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIP 505 (729)
T ss_dssp -GGHHHHHHHHHHHHHHH-----HHSTTCEEECSC-------CCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCT
T ss_pred -HHHHHHHHHHHHHHHhh-----cccCCceEEEeC-------eEEehhhccccCCCEEEEcCCCCcccccccCccCCCCC
Confidence 11112222211111110 011235665443 23444455568899999999998 4556666
Q ss_pred cCC--Cceeecchhhhccc-cCCceEEEEC--CChhHHHHHHHHHhCCCeEEEEcccCcCCCC--CCHHHHHHHHHHHhC
Q 008850 250 EVD--GKTVITSDHALKLE-FVPDWIAIVG--SGYIGLEFSDVYTALGSEVTFIEALDQLMPG--FDPEIGKLAQRVLIN 322 (551)
Q Consensus 250 ~~~--~~~v~~~~~~~~~~-~~~k~v~VvG--~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--~~~~~~~~~~~~l~~ 322 (551)
+.+ ...+++..+++... ..+++|+||| +|.+|+|+|..|++.|.+||++++.+ +++. ++.. ...+.+.+++
T Consensus 506 G~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~ 583 (729)
T 1o94_A 506 GADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHE 583 (729)
T ss_dssp TCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHH
T ss_pred CccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHh
Confidence 654 44577776665443 3468999999 99999999999999999999999988 6542 2322 3556667765
Q ss_pred CCceEEEeceEEE-eCCCcEEEEEe--cccC-------------CCCCeEEecCEEEEeecCCCCCCCCCCcccccccCC
Q 008850 323 PRKIDYHTGVFAT-KDGKPVTIELI--DAKT-------------KEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQR 386 (551)
Q Consensus 323 ~~gi~~~~~~~~~-~~~~~~~v~~~--~g~~-------------~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~ 386 (551)
.||+++++..+. ..++.+.++.. ++.. .++..++++|.||+|+|++|+++++ +..+
T Consensus 584 -~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~--~~l~----- 655 (729)
T 1o94_A 584 -LHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLW--NELK----- 655 (729)
T ss_dssp -TTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHH--HHHH-----
T ss_pred -CCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHH--HHHh-----
Confidence 899999999887 44444444431 1100 0112349999999999999998744 2211
Q ss_pred CceeeCCCCccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCC
Q 008850 387 GFVPVDERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGR 438 (551)
Q Consensus 387 G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 438 (551)
..+|++++ |++|+|||+|||++ +..+..|+.||+.||.+|.+.
T Consensus 656 --~~vd~~~~------t~~~~VyAiGD~~~-~~~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 656 --ARESEWAE------NDIKGIYLIGDAEA-PRLIADATFTGHRVAREIEEA 698 (729)
T ss_dssp --HTGGGTGG------GTCCEEEECGGGTS-CCCHHHHHHHHHHHHHTTTSS
T ss_pred --hhcccccc------cCCCCeEEEeCccc-hhhHHHHHHHHHHHHHHhhhh
Confidence 23788898 78999999999997 567888999999999999864
No 81
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=4.8e-31 Score=273.14 Aligned_cols=279 Identities=18% Similarity=0.185 Sum_probs=191.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcC--CcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCc-ccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKG--LKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGL-QVHAAGY 178 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g--~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~ 178 (551)
.+|||||||+||+++|.+|++.+ .+|+|||+......| |....+. .|. +......
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~------p~~~~v~----------------~g~~~~~~~~~ 60 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC------YMSNEVI----------------GGDRELASLRV 60 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS------TTHHHHH----------------HTSSCGGGGEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc------cCHHHHh----------------cCCCCHHHHhh
Confidence 47999999999999999999876 589999995432221 1100000 000 0000001
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCccCCCc--
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGK-- 254 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~~~~~-- 254 (551)
+. ..+...||+++.+++..++ .+.+.+.++.++.||+||||||+.+..+++++....
T Consensus 61 ~~-------------------~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~ 121 (401)
T 3vrd_B 61 GY-------------------DGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALA 121 (401)
T ss_dssp CS-------------------HHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGG
T ss_pred CH-------------------HHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccCCccCchhhcc
Confidence 11 1223469999999987664 578888999999999999999999887766554321
Q ss_pred --e---eecchhhhccc----c-CCceEEEECCCh-----------hHHHHHHHHHhCC--CeEEEEcccCcCCC--CCC
Q 008850 255 --T---VITSDHALKLE----F-VPDWIAIVGSGY-----------IGLEFSDVYTALG--SEVTFIEALDQLMP--GFD 309 (551)
Q Consensus 255 --~---v~~~~~~~~~~----~-~~k~v~VvG~G~-----------~g~e~A~~l~~~g--~~Vtlv~~~~~~l~--~~~ 309 (551)
. ..+.++...+. . .....+|+++|. .+++++..+++.+ .+|+++++.+.+.. .++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 201 (401)
T 3vrd_B 122 AKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFT 201 (401)
T ss_dssp GTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHH
T ss_pred cCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccccccccccc
Confidence 1 12223322221 1 123334443322 3456667776654 78999998887643 355
Q ss_pred HHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCC
Q 008850 310 PEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQR 386 (551)
Q Consensus 310 ~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~ 386 (551)
+.+.+.+.+.+++ .||+++++..+. .+++...+++.++ +++++|.+++++|++|+.. +++.++..++
T Consensus 202 ~~~~~~~~~~l~~-~gi~v~~~~~v~~v~~~~~~~~v~~~~g------~~i~~D~vi~~~g~~~~~~---~~~~gl~~~~ 271 (401)
T 3vrd_B 202 KGWERLYGFGTEN-ALIEWHPGPDAAVVKTDTEAMTVETSFG------ETFKAAVINLIPPQRAGKI---AQSASLTNDS 271 (401)
T ss_dssp HHHHHHSCTTSTT-CSEEEECTTTTCEEEEETTTTEEEETTS------CEEECSEEEECCCEEECHH---HHHTTCCCTT
T ss_pred HHHHHHHHHHHHh-cCcEEEeCceEEEEEecccceEEEcCCC------cEEEeeEEEEecCcCCchh---HhhccccccC
Confidence 6666666666665 899999886543 4445556777665 6899999999999999742 3567777789
Q ss_pred CceeeCCC-CccccCCCCCCCcEEEecCCCCC---CCcHHHHHHHHHHHHHHHc
Q 008850 387 GFVPVDER-MRVIDANGNLVPHLYCIGDANGK---MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 387 G~i~Vd~~-~~~~~~~~t~~~~IyA~GD~~~~---~~~~~~A~~~g~~aa~~i~ 436 (551)
|+|.||++ +|+ |++|||||+|||+.. |++++.|.+||+++|+||+
T Consensus 272 G~i~VD~~tl~~-----t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 272 GWCPVDIRTFES-----SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp SSBCBCTTTCBB-----SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCccee-----cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 99999987 776 899999999999753 5789999999999999997
No 82
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=1.1e-29 Score=266.52 Aligned_cols=299 Identities=17% Similarity=0.137 Sum_probs=193.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC--cEEEeeC-CccCcccccCCcc------CChh-------hHh-------hHHH
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGL--KTAIIEG-DVVGGTCVNRGCV------PSKA-------LLA-------VSGR 156 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~-~~~GG~~~~~g~~------p~~~-------~~~-------~~~~ 156 (551)
..+||+|||||++|+++|..|++.|. +|+|||+ +.+||.|.+.+|. |... +.. ....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35899999999999999999999999 9999999 6899999887652 2110 000 0000
Q ss_pred HHHHH-----hhhhhhhcCccccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe----CCcEEEeC
Q 008850 157 MRELQ-----SEHHMKALGLQVHA-AGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL----GPQKVKFG 225 (551)
Q Consensus 157 ~~~~~-----~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~----~~~~v~~~ 225 (551)
++.+. ....+..+.++... ....+..+.+++... .+..++.++.++. ..+ +.+.|++.
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------~~~~~~~i~~~t~V~~v~~~~~~~~V~~~ 153 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIY-----------AQPLLPFIKLATDVLDIEKKDGSWVVTYK 153 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHH-----------HGGGGGGEECSEEEEEEEEETTEEEEEEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHH-----------HHHhhCeEEeCCEEEEEEeCCCeEEEEEe
Confidence 00000 00001111111111 112333444443333 3333444444432 221 22466665
Q ss_pred c---ce---EEEeCeEEEeCCC--CCCCCCCccCCC------ceeecchhhhcc-ccCCceEEEECCChhHHHHHHHHHh
Q 008850 226 T---DN---IVTAKDIIIATGS--VPFVPKGIEVDG------KTVITSDHALKL-EFVPDWIAIVGSGYIGLEFSDVYTA 290 (551)
Q Consensus 226 ~---g~---~i~~d~lVlAtG~--~p~~p~~~~~~~------~~v~~~~~~~~~-~~~~k~v~VvG~G~~g~e~A~~l~~ 290 (551)
+ |. ++.||+||+|||. .|++|++++.+. ..++++.++... ...+++|+|||+|++|+|+|..|++
T Consensus 154 ~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~ 233 (447)
T 2gv8_A 154 GTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTP 233 (447)
T ss_dssp ESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTT
T ss_pred ecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHH
Confidence 4 55 7999999999998 688887665321 125555444433 3468999999999999999999999
Q ss_pred CCCe-EEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEEe-CCCcEEEEEecccCCCCCeE-EecCEEEEeec
Q 008850 291 LGSE-VTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFATK-DGKPVTIELIDAKTKEPKDT-LEVDAALIATG 367 (551)
Q Consensus 291 ~g~~-Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~~-~~~~~~v~~~~g~~~~~~~~-i~~D~vi~a~G 367 (551)
.+.+ |++++|++.+ +.+ .+|.+.....-.. ++. .|++.+| +. +++|.||+|||
T Consensus 234 ~~~~~V~l~~r~~~~---------------l~~-~~i~~~~~v~~~~~~~~--~v~~~dG------~~~~~~D~vi~atG 289 (447)
T 2gv8_A 234 VAKHPIYQSLLGGGD---------------IQN-ESLQQVPEITKFDPTTR--EIYLKGG------KVLSNIDRVIYCTG 289 (447)
T ss_dssp TSCSSEEEECTTCCS---------------CBC-SSEEEECCEEEEETTTT--EEEETTT------EEECCCSEEEECCC
T ss_pred HhCCcEEEEeCCCCc---------------CCC-CCeEEecCeEEEecCCC--EEEECCC------CEeccCCEEEECCC
Confidence 9999 9999998765 333 6887654432222 332 5777765 34 78999999999
Q ss_pred CCCCCCC-----CCCcccccccCCCceeeCCCCccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCC
Q 008850 368 RAPFTNG-----LGLENINVVTQRGFVPVDERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGR 438 (551)
Q Consensus 368 ~~p~~~~-----l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 438 (551)
++|++++ +.....++. .++.+.++.+.++.. ++.|+||++||+... .+++.|..||+++|++|.|+
T Consensus 290 ~~~~~~~l~~~~l~~~~~~i~-~~~~~~~~~~~~v~~---~~~p~l~~~G~~~~~-~~~~~a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 290 YLYSVPFPSLAKLKSPETKLI-DDGSHVHNVYQHIFY---IPDPTLAFVGLALHV-VPFPTSQAQAAFLARVWSGR 360 (447)
T ss_dssp BCCCCCCHHHHSCCSTTTCCC-SSSSSCCSEETTTEE---TTCTTEEESSCCBSS-CHHHHHHHHHHHHHHHHTTS
T ss_pred CCcCCCCCcccccccccCcee-cCCCccccccccccc---CCCCcEEEEeccccc-cCchHHHHHHHHHHHHHcCC
Confidence 9999998 631111222 244455565554332 678999999999876 47899999999999999986
No 83
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=1.2e-30 Score=287.69 Aligned_cols=271 Identities=19% Similarity=0.172 Sum_probs=201.9
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccc
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAA 176 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 176 (551)
....+||+|||||+||++||..|+++|++|+|||+ +.+||+|....++|.+.
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~--------------------------- 440 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLS--------------------------- 440 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCG---------------------------
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchh---------------------------
Confidence 34568999999999999999999999999999999 78999876544443221
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHc-CeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCC--------CCCC
Q 008850 177 GYDRQGVADHANNLATKIRNNLTNSMKAL-GVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVP--------FVPK 247 (551)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p--------~~p~ 247 (551)
++ ..+..++...+.+. +|+++.++ .+..+++.++.||+||+|||+.| ..|+
T Consensus 441 --~~-----------~~~~~~~~~~~~~~~gv~~~~~~-------~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~ 500 (690)
T 3k30_A 441 --AW-----------GRVKEYREAVLAELPNVEIYRES-------PMTGDDIVEFGFEHVITATGATWRTDGVARFHTTA 500 (690)
T ss_dssp --GG-----------GHHHHHHHHHHHTCTTEEEESSC-------CCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSC
T ss_pred --HH-----------HHHHHHHHHHHHHcCCCEEEECC-------eecHHHHhhcCCCEEEEcCCCccccccccccCCCC
Confidence 11 12222333444555 88888774 23334455688999999999984 4667
Q ss_pred CccCCCceeecchhhhccc-cCCceEEEEC--CChhHHHHHHHHHhCCCeEEEEcccCcCCCCCC-HHHHHHHHHHHhCC
Q 008850 248 GIEVDGKTVITSDHALKLE-FVPDWIAIVG--SGYIGLEFSDVYTALGSEVTFIEALDQLMPGFD-PEIGKLAQRVLINP 323 (551)
Q Consensus 248 ~~~~~~~~v~~~~~~~~~~-~~~k~v~VvG--~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~-~~~~~~~~~~l~~~ 323 (551)
+++.+...+++..++.... ..+++|+||| +|.+|+|+|..|.+.|.+|+++++.+.+++..+ +.....+.+.+++
T Consensus 501 i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~- 579 (690)
T 3k30_A 501 LPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIE- 579 (690)
T ss_dssp CCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHH-
T ss_pred CCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHH-
Confidence 7776666788777766543 3467899999 999999999999999999999999988876543 4456777788876
Q ss_pred CceEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCC
Q 008850 324 RKIDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANG 402 (551)
Q Consensus 324 ~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~ 402 (551)
.||++++++.+. .+++...++... .++++++++|.||+|+|++|+++++ +..+ ..+. +
T Consensus 580 ~GV~i~~~~~V~~i~~~~~~v~~~~---~~~~~~i~aD~VV~A~G~~p~~~l~--~~l~---~~~~-------~------ 638 (690)
T 3k30_A 580 NGVARVTDHAVVAVGAGGVTVRDTY---ASIERELECDAVVMVTARLPREELY--LDLV---ARRD-------A------ 638 (690)
T ss_dssp TTCEEEESEEEEEEETTEEEEEETT---TCCEEEEECSEEEEESCEEECCHHH--HHHH---HHHH-------H------
T ss_pred CCCEEEcCcEEEEEECCeEEEEEcc---CCeEEEEECCEEEECCCCCCChHHH--HHHh---hhhc-------c------
Confidence 899999999887 444444444321 1234689999999999999998744 2111 1111 4
Q ss_pred CCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCC
Q 008850 403 NLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGR 438 (551)
Q Consensus 403 t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 438 (551)
|+.|+|||+|||++. +....|+.||+.+|.||.+.
T Consensus 639 t~~~~VyaiGD~~~~-~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 639 GEIASVRGIGDAWAP-GTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp TSCSEEEECGGGTSC-BCHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCEEEEeCCCch-hhHHHHHHHHHHHHHHHHhh
Confidence 889999999999986 45666999999999999865
No 84
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.97 E-value=7.1e-31 Score=274.22 Aligned_cols=283 Identities=17% Similarity=0.210 Sum_probs=196.6
Q ss_pred ccEEEECCChHHHHHHHHHHH--cCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVE--KGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~--~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
+||+|||||++|+++|..|++ .|++|+|||+ +.+++. |..... ..+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-------~~~~~~----------------~~g~~------ 53 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------PAFPHL----------------AMGWR------ 53 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------GGHHHH----------------HHTCS------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-------CCcchh----------------ccCcc------
Confidence 599999999999999999999 7899999999 443331 110000 00000
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCCCCCcc-CCCce
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILG--PQKVKFGTDNIVTAKDIIIATGSVPFVPKGIE-VDGKT 255 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~-~~~~~ 255 (551)
+. +++...+...+++.+++++.+++..++ .+.|.++++.++.||+||+|||+.|..|+... .....
T Consensus 54 ~~-----------~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~~~g~~~~ 122 (430)
T 3h28_A 54 KF-----------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTS 122 (430)
T ss_dssp CG-----------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCC
T ss_pred CH-----------HHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccCCCCCcCCccC
Confidence 00 000001112334579999998877664 45788888888999999999999988774221 11123
Q ss_pred eecchhhhcccc------CCceEEEECCChhH------HHHH----HHHHhCC----CeEEEEcccCcCC----CCCCHH
Q 008850 256 VITSDHALKLEF------VPDWIAIVGSGYIG------LEFS----DVYTALG----SEVTFIEALDQLM----PGFDPE 311 (551)
Q Consensus 256 v~~~~~~~~~~~------~~k~v~VvG~G~~g------~e~A----~~l~~~g----~~Vtlv~~~~~~l----~~~~~~ 311 (551)
+.+.+++..+.. .+++++|||+|+.+ +|+| ..+.+.| .+|+++++.+.+. +.+. +
T Consensus 123 ~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~-~ 201 (430)
T 3h28_A 123 ICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIG-A 201 (430)
T ss_dssp CSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCST-T
T ss_pred cCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcch-H
Confidence 445555543321 14567889987654 8877 4555667 5899999988763 3333 4
Q ss_pred HHHHHHHHHhCCCceEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCC-ce
Q 008850 312 IGKLAQRVLINPRKIDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRG-FV 389 (551)
Q Consensus 312 ~~~~~~~~l~~~~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G-~i 389 (551)
..+.+.+.+++ .||+++++..+. .+++. +++.+.. ++++++++|.+++++|++|+.....+ ..++..++| +|
T Consensus 202 ~~~~l~~~l~~-~GV~i~~~~~v~~v~~~~--v~~~~~~--~~g~~i~~D~vv~a~G~~~~~~l~~~-~~gl~~~~G~~i 275 (430)
T 3h28_A 202 SKRLVEDLFAE-RNIDWIANVAVKAIEPDK--VIYEDLN--GNTHEVPAKFTMFMPSFQGPEVVASA-GDKVANPANKMV 275 (430)
T ss_dssp HHHHHHHHHHH-TTCEEECSCEEEEECSSE--EEEECTT--SCEEEEECSEEEEECEEECCHHHHTT-CTTTBCTTTCCB
T ss_pred HHHHHHHHHHH-CCCEEEeCCEEEEEeCCe--EEEEecC--CCceEEeeeEEEECCCCccchhHhhc-cccCcCCCCCEE
Confidence 77888888886 899999999888 55444 4444421 22368999999999999987542211 145655789 99
Q ss_pred eeCCCCccccCCCCCCCcEEEecCCCCC------------CCcHHHHHHHHHHHHHHHc
Q 008850 390 PVDERMRVIDANGNLVPHLYCIGDANGK------------MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 390 ~Vd~~~~~~~~~~t~~~~IyA~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 436 (551)
.||+++|+ +++|||||+|||+.. |++++.|..||+++|+||.
T Consensus 276 ~Vd~~l~t-----~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~ 329 (430)
T 3h28_A 276 IVNRCFQN-----PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp CCCTTSBC-----SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ecCccccC-----CCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 99999995 599999999999863 5689999999999999997
No 85
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=8.3e-29 Score=261.26 Aligned_cols=317 Identities=15% Similarity=0.111 Sum_probs=195.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-----CcEEEeeC-CccCcccccCCcc-CChhh--------HhhHHHHHHHHhhh
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKG-----LKTAIIEG-DVVGGTCVNRGCV-PSKAL--------LAVSGRMRELQSEH 164 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g-----~~V~liE~-~~~GG~~~~~g~~-p~~~~--------~~~~~~~~~~~~~~ 164 (551)
..+||+|||||++|+++|..|++.| ++|+|||+ +.+| |.. +.+ |...+ .........+....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~-~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~ 105 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHG-NTLVSQSELQISFLKDLVSLRNPTSPYSFVN 105 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSG-GGCCSSCBCSSCTTSSSSTTTCTTCTTSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcC-CCCCCCCcCCcchhhccccccCCCCCCChhH
Confidence 4589999999999999999999999 99999999 5555 221 111 11000 00000000000000
Q ss_pred hhhhcCc-----cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC-----Cc----EEEeCcce-
Q 008850 165 HMKALGL-----QVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG-----PQ----KVKFGTDN- 228 (551)
Q Consensus 165 ~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~-----~~----~v~~~~g~- 228 (551)
++...+. ......... .++..++....+..++++..++ +..++ .. .|.+.++.
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g 174 (463)
T 3s5w_A 106 YLHKHDRLVDFINLGTFYPCR-----------MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADG 174 (463)
T ss_dssp HHHHTTCHHHHHHHCCSCCBH-----------HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTS
T ss_pred hhhhcCceeecccccCCCCCH-----------HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCC
Confidence 0000000 000001122 2333344444555677777765 33221 21 55555554
Q ss_pred ---EEEeCeEEEeCCCCCCCCCC-ccCCCc-e-eecchhhhcccc------CCceEEEECCChhHHHHHHHHHhC--CCe
Q 008850 229 ---IVTAKDIIIATGSVPFVPKG-IEVDGK-T-VITSDHALKLEF------VPDWIAIVGSGYIGLEFSDVYTAL--GSE 294 (551)
Q Consensus 229 ---~i~~d~lVlAtG~~p~~p~~-~~~~~~-~-v~~~~~~~~~~~------~~k~v~VvG~G~~g~e~A~~l~~~--g~~ 294 (551)
++.||+||+|||+.|.+|+. .++.+. . +++.+....... .+++|+|||+|.+|+|+|..|.+. +.+
T Consensus 175 ~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~ 254 (463)
T 3s5w_A 175 EELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQ 254 (463)
T ss_dssp CEEEEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEE
T ss_pred ceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCe
Confidence 89999999999999998873 445553 3 444444333333 479999999999999999999999 899
Q ss_pred EEEEcccCcCCCCC--------------------CHHHHHHHHHHH-------------------------hCCCceEEE
Q 008850 295 VTFIEALDQLMPGF--------------------DPEIGKLAQRVL-------------------------INPRKIDYH 329 (551)
Q Consensus 295 Vtlv~~~~~~l~~~--------------------~~~~~~~~~~~l-------------------------~~~~gi~~~ 329 (551)
|++++|++.+++.. +++....+.+.+ ....+|+++
T Consensus 255 Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~ 334 (463)
T 3s5w_A 255 ADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFR 334 (463)
T ss_dssp EEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEE
T ss_pred EEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 99999999876632 222222222221 112589999
Q ss_pred eceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCC--CCCCCCcccccccCCCceeeCCCCccccCCCCC
Q 008850 330 TGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPF--TNGLGLENINVVTQRGFVPVDERMRVIDANGNL 404 (551)
Q Consensus 330 ~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~--~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~ 404 (551)
+++.+. .+++.+.+++.+.. .++..++++|.||+|||++|+ .+++ +...... |.+.||+++++.. .+..
T Consensus 335 ~~~~v~~v~~~~~~~~v~~~~~~-~g~~~~~~~D~Vv~AtG~~p~~~~~~l--~~l~~~~--g~i~v~~~~~~~~-~~~~ 408 (463)
T 3s5w_A 335 CMTTVERATATAQGIELALRDAG-SGELSVETYDAVILATGYERQLHRQLL--EPLAEYL--GDHEIGRDYRLQT-DERC 408 (463)
T ss_dssp TTEEEEEEEEETTEEEEEEEETT-TCCEEEEEESEEEECCCEECCC-CTTT--GGGGGGB--C--CCCTTSBCCB-CTTB
T ss_pred eCCEEEEEEecCCEEEEEEEEcC-CCCeEEEECCEEEEeeCCCCCCccchh--HHHHHHh--CCcccCccccccc-CCCC
Confidence 998876 44566777776431 122346999999999999999 4444 3222222 7899999999632 1123
Q ss_pred CCcEEEecCCC-----CCCCcHHHHHHHHHHHHHHHc
Q 008850 405 VPHLYCIGDAN-----GKMMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 405 ~~~IyA~GD~~-----~~~~~~~~A~~~g~~aa~~i~ 436 (551)
.|+|||+|||. ..+.+...|.++++++...+-
T Consensus 409 ~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 409 KVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp CSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 67899999995 235678889999998877664
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=5.2e-30 Score=291.01 Aligned_cols=280 Identities=16% Similarity=0.194 Sum_probs=198.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
..+||+||||||||++||..|++.|++|+|||+ +.+||+|.+ | | +.++. ..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~--~-~-k~~i~------------------------~~ 178 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD--T-A-GEQID------------------------GM 178 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG--S-S-CCEET------------------------TE
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc--C-C-ccccC------------------------CC
Confidence 468999999999999999999999999999999 689999883 3 2 11100 00
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-cCeEEEeceEE-EeC-Cc------------EEEe------CcceEEEeCeEEE
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKA-LGVDILTGVGT-ILG-PQ------------KVKF------GTDNIVTAKDIII 237 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~-~~~-~~------------~v~~------~~g~~i~~d~lVl 237 (551)
.. .++...+...+.. .+++++.++.. .++ .. .+.. +++.++.||+|||
T Consensus 179 ~~-----------~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVl 247 (965)
T 2gag_A 179 DS-----------SAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVL 247 (965)
T ss_dssp EH-----------HHHHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEE
T ss_pred CH-----------HHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEE
Confidence 00 0111122233344 38888877432 221 11 1111 1224789999999
Q ss_pred eCCCCCCCCCCccCCCceeecchhhhc----ccc-CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHH
Q 008850 238 ATGSVPFVPKGIEVDGKTVITSDHALK----LEF-VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEI 312 (551)
Q Consensus 238 AtG~~p~~p~~~~~~~~~v~~~~~~~~----~~~-~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 312 (551)
|||+.|+.|++++.+..+++++..+.. ... .+++++|||+|++|+|+|..|.+.|.+|+++++++.+++ .
T Consensus 248 ATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~----~- 322 (965)
T 2gag_A 248 ATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA----A- 322 (965)
T ss_dssp CCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH----H-
T ss_pred CCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch----h-
Confidence 999999888877766666777644322 222 358999999999999999999999999999999987753 2
Q ss_pred HHHHHHHHhCCCceEEEeceEEE---e--CCCcEEEEEecccC---CCCCeEEecCEEEEeecCCCCCCCCCCccccccc
Q 008850 313 GKLAQRVLINPRKIDYHTGVFAT---K--DGKPVTIELIDAKT---KEPKDTLEVDAALIATGRAPFTNGLGLENINVVT 384 (551)
Q Consensus 313 ~~~~~~~l~~~~gi~~~~~~~~~---~--~~~~~~v~~~~g~~---~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~ 384 (551)
.+.+++ .||+++++..+. . ++....|++.+... +++.+++++|.|++++|++||++++. .
T Consensus 323 ----~~~l~~-~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~-------~ 390 (965)
T 2gag_A 323 ----AAQAVA-DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHS-------Q 390 (965)
T ss_dssp ----HHHHHH-TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHH-------H
T ss_pred ----HHHHHh-CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHH-------h
Confidence 345555 799999998877 3 33333566654000 01125799999999999999987541 2
Q ss_pred CCCceeeCCCCccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcC
Q 008850 385 QRGFVPVDERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 385 ~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 437 (551)
.+|.|.||++++.... .|+.|+|||+|||++.+.+. .|..||++||.+|++
T Consensus 391 ~~g~i~vd~~~~~~v~-~ts~p~IyAaGD~a~~~~l~-~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 391 RQGKLDWDTTIHAFVP-ADAVANQHLAGAMTGRLDTA-SALSTGAATGAAAAT 441 (965)
T ss_dssp TTCCEEEETTTTEEEE-CSCCTTEEECGGGGTCCSHH-HHHHHHHHHHHHHHH
T ss_pred CCCcEEEcCccccccc-CCCCCCEEEEEecCCchhHH-HHHHHHHHHHHHHHH
Confidence 3577999998862110 16899999999999887665 899999999999974
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.9e-28 Score=269.43 Aligned_cols=258 Identities=21% Similarity=0.295 Sum_probs=190.6
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
...+||+|||||+||++||..|++.|++|+|||+ +.+||+|....++|.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~--------------------------- 423 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEE--------------------------- 423 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTT---------------------------
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHH---------------------------
Confidence 3458999999999999999999999999999999 678998765555543211
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEE-EeCeEEEeCCCCCCCCCCccCCCcee
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIV-TAKDIIIATGSVPFVPKGIEVDGKTV 256 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i-~~d~lVlAtG~~p~~p~~~~~~~~~v 256 (551)
+ .++...+...+++.+|+++.++... . ..+ .||+||||||+.|+.|++++.+...+
T Consensus 424 --~-----------~~~~~~~~~~~~~~gv~~~~~~~v~-------~---~~~~~~d~lviAtG~~p~~~~i~G~~~~~v 480 (671)
T 1ps9_A 424 --F-----------YETLRYYRRMIEVTGVTLKLNHTVT-------A---DQLQAFDETILASGIVPRTPPIDGIDHPKV 480 (671)
T ss_dssp --H-----------HHHHHHHHHHHHHHTCEEEESCCCC-------S---SSSCCSSEEEECCCEEECCCCCBTTTSTTE
T ss_pred --H-----------HHHHHHHHHHHHHcCCEEEeCcEec-------H---HHhhcCCEEEEccCCCcCCCCCCCCCCCcE
Confidence 1 1111223344566799998876221 1 124 89999999999999888777665567
Q ss_pred ecchhhhccc-cCCceEEEECCChhHHHHHHHHHhCCC-------------------------------------eEEEE
Q 008850 257 ITSDHALKLE-FVPDWIAIVGSGYIGLEFSDVYTALGS-------------------------------------EVTFI 298 (551)
Q Consensus 257 ~~~~~~~~~~-~~~k~v~VvG~G~~g~e~A~~l~~~g~-------------------------------------~Vtlv 298 (551)
++..+..... ..+++|+|||+|.+|+|+|..|++.|. +|+++
T Consensus 481 ~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 560 (671)
T 1ps9_A 481 LSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVML 560 (671)
T ss_dssp EEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEE
T ss_pred eeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEE
Confidence 7665555433 457999999999999999999998773 56677
Q ss_pred cccCcCCC-CCCHHHHHHHHHHHhCCCceEEEeceEEE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCC
Q 008850 299 EALDQLMP-GFDPEIGKLAQRVLINPRKIDYHTGVFAT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLG 376 (551)
Q Consensus 299 ~~~~~~l~-~~~~~~~~~~~~~l~~~~gi~~~~~~~~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~ 376 (551)
++.+..+. .+++.....+.+.+++ .||+++++..+. .+++.+.++ .+| +.+++++|.|++|+|++||++++.
T Consensus 561 ~~~~~~l~~~l~~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~v~~~-~~G----~~~~i~~D~Vi~a~G~~p~~~l~~ 634 (671)
T 1ps9_A 561 QRKASKPGQGLGKTTGWIHRTTLLS-RGVKMIPGVSYQKIDDDGLHVV-ING----ETQVLAVDNVVICAGQEPNRALAQ 634 (671)
T ss_dssp CSSCSCTTTTSCTTTHHHHHHHHHH-TTCEEECSCEEEEEETTEEEEE-ETT----EEEEECCSEEEECCCEEECCTTHH
T ss_pred EecchhhccccccccHHHHHHHHHh-cCCEEEeCcEEEEEeCCeEEEe-cCC----eEEEEeCCEEEECCCccccHHHHH
Confidence 76665543 3667777777888876 899999998887 444444443 333 225799999999999999987542
Q ss_pred CcccccccCCCceeeCCCCccccCCCCCCCcEEEecCCCCCC-CcHHHHHHHHHHHHHHH
Q 008850 377 LENINVVTQRGFVPVDERMRVIDANGNLVPHLYCIGDANGKM-MLAHAASAQGISVVEQV 435 (551)
Q Consensus 377 l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~~-~~~~~A~~~g~~aa~~i 435 (551)
. ++ ...++||++|||+... ..+..|++||..+|.||
T Consensus 635 --~---------------l~------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 635 --P---------------LI------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp --H---------------HH------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred --H---------------HH------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 1 11 2236899999998654 46999999999999986
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.96 E-value=3.7e-28 Score=259.31 Aligned_cols=190 Identities=20% Similarity=0.212 Sum_probs=133.2
Q ss_pred CcccEEEECCChHHHHHHHHHH-HcCCcEEEeeC-CccCcccccC---Cc---cCChhhHhhHHHHHHHHhhhhhhhcCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAV-EKGLKTAIIEG-DVVGGTCVNR---GC---VPSKALLAVSGRMRELQSEHHMKALGL 171 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~-~~g~~V~liE~-~~~GG~~~~~---g~---~p~~~~~~~~~~~~~~~~~~~~~~~g~ 171 (551)
.++||+|||||++|+++|..|+ +.|++|+|||+ +.+||+|... +| +|++.+...... .....+++
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~-------~~~~~~~~ 79 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDR-------DLLQESTW 79 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCH-------HHHHHCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeecccc-------ccccCCCC
Confidence 3589999999999999999999 89999999999 8899999732 44 444433222100 00111222
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCe--EEEece-EEEe---C---CcEEEeCcceEEEeCeEEEeCC--
Q 008850 172 QVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGV--DILTGV-GTIL---G---PQKVKFGTDNIVTAKDIIIATG-- 240 (551)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~-~~~~---~---~~~v~~~~g~~i~~d~lVlAtG-- 240 (551)
. ....+..++.. ++....++.++ ++..++ +..+ + .+.|.+.+|+++.||+||+|||
T Consensus 80 ~--~~~~~~~ei~~-----------~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 80 K--TTYITQPEILE-----------YLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp S--BSEEEHHHHHH-----------HHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred c--ccCCCHHHHHH-----------HHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 2 11223434433 33444455565 555443 2221 2 2477888888899999999999
Q ss_pred CCCCCCCCcc---CCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc-CCCCCC
Q 008850 241 SVPFVPKGIE---VDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ-LMPGFD 309 (551)
Q Consensus 241 ~~p~~p~~~~---~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~l~~~~ 309 (551)
+.|..|++++ +.+..++++.+.......+|+|+|||+|.+|+|+|..|++.+.+||+++|.+. ++|.++
T Consensus 147 s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~ 219 (540)
T 3gwf_A 147 SAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGN 219 (540)
T ss_dssp CSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCC
T ss_pred ccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcc
Confidence 5788776555 44566777777777777899999999999999999999999999999999987 444433
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=6.4e-26 Score=242.33 Aligned_cols=194 Identities=21% Similarity=0.240 Sum_probs=128.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.++||+|||||++|+++|.+|++.|++|+|||+ +.+||+|. ..|+|..........+...-.......+ .......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~-~~~yPg~~~d~~~~~y~~~f~~~~~~~~--~~~~~~~ 84 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY-WNRYPGCRLDTESYAYGYFALKGIIPEW--EWSENFA 84 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCTTCBCSSCHHHHCHHHHTTSSTTC--CCSBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-cCCCCceeecCchhhcccccCcccccCC--CccccCC
Confidence 358999999999999999999999999999999 78999995 4566643221111111000000000011 1112223
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCe--EEEece-EEE---eC---CcEEEeCcceEEEeCeEEEeCC--CCCCCCC
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGV--DILTGV-GTI---LG---PQKVKFGTDNIVTAKDIIIATG--SVPFVPK 247 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~-~~~---~~---~~~v~~~~g~~i~~d~lVlAtG--~~p~~p~ 247 (551)
+..++..++....+ +.++ .+..++ +.. .+ .+.|.+.+|+++.||+||+||| +.|..|+
T Consensus 85 ~~~ei~~yl~~~~~-----------~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ 153 (545)
T 3uox_A 85 SQPEMLRYVNRAAD-----------AMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPD 153 (545)
T ss_dssp BHHHHHHHHHHHHH-----------HHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CC
T ss_pred CHHHHHHHHHHHHH-----------HcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCC
Confidence 45555555444333 3343 333332 221 11 2478888888999999999999 7788776
Q ss_pred Ccc---CCCceeecchhhhc-------cccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC-CCC
Q 008850 248 GIE---VDGKTVITSDHALK-------LEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL-MPG 307 (551)
Q Consensus 248 ~~~---~~~~~v~~~~~~~~-------~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-l~~ 307 (551)
+++ +.+..+++..+... ....+|+|+|||+|.+|+|+|..|++.+.+||+++|.+.+ +|.
T Consensus 154 ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~ 224 (545)
T 3uox_A 154 IKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPL 224 (545)
T ss_dssp CTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEEC
T ss_pred CCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccC
Confidence 555 44566777776665 5667899999999999999999999999999999999874 444
No 90
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.94 E-value=1.6e-26 Score=244.89 Aligned_cols=249 Identities=24% Similarity=0.244 Sum_probs=174.9
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
..++||+|||||++|+++|.+|++. ++|+|||+ +.+||.+...... .+|++.
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~----------------------~~g~~~---- 158 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK----------------------QEGFNK---- 158 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE----------------------ETTTTE----
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc----------------------cCCCCC----
Confidence 3458999999999999999999999 99999999 6788887642110 011110
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE---EeCCc--EEEe-Ccce--EEEeCeEEEeCCCCCCCCCCc
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGT---ILGPQ--KVKF-GTDN--IVTAKDIIIATGSVPFVPKGI 249 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~--~v~~-~~g~--~i~~d~lVlAtG~~p~~p~~~ 249 (551)
.. .++...+...+ ..+++++.+... ..+.. .+.. +++. ++.||+||||||+.|+.|+++
T Consensus 159 -~~-----------~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~ 225 (493)
T 1y56_A 159 -DS-----------RKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFE 225 (493)
T ss_dssp -EH-----------HHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCT
T ss_pred -CH-----------HHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCC
Confidence 11 11112222222 468888776533 11222 2221 3333 689999999999999888777
Q ss_pred cCCCceeecchhhhccc-----cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCC
Q 008850 250 EVDGKTVITSDHALKLE-----FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPR 324 (551)
Q Consensus 250 ~~~~~~v~~~~~~~~~~-----~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~ 324 (551)
+.+..++++..++..+. ..+++++|||+|++|+| +.+++ .
T Consensus 226 g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle----------------------------------~~l~~-~ 270 (493)
T 1y56_A 226 NNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI----------------------------------QELER-W 270 (493)
T ss_dssp TTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH----------------------------------HHHHH-H
T ss_pred CCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH----------------------------------HHHHh-C
Confidence 66555677766554321 23589999999999998 23344 6
Q ss_pred ceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCccccccc---CCCcee-eCCCCcc
Q 008850 325 KIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVT---QRGFVP-VDERMRV 397 (551)
Q Consensus 325 gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~---~~G~i~-Vd~~~~~ 397 (551)
||+++++..+. .+++...+++.++ +++++|.|++++|++|+++++ +..++.. ++|+|. ||++++
T Consensus 271 GV~v~~~~~v~~i~~~~~v~~v~~~~g------~~i~aD~Vv~a~G~~p~~~l~--~~~g~~~~~~~~g~i~~vd~~~~- 341 (493)
T 1y56_A 271 GIDYVHIPNVKRVEGNEKVERVIDMNN------HEYKVDALIFADGRRPDINPI--TQAGGKLRFRRGYYSPVLDEYHR- 341 (493)
T ss_dssp TCEEEECSSEEEEECSSSCCEEEETTC------CEEECSEEEECCCEEECCHHH--HHTTCCEEEETTEEEECCCTTSE-
T ss_pred CcEEEeCCeeEEEecCCceEEEEeCCC------eEEEeCEEEECCCcCcCchHH--HhcCCCccccCCceeeccccccC-
Confidence 89999987666 2333444555444 689999999999999998755 3444432 578887 899987
Q ss_pred ccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcCC
Q 008850 398 IDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGR 438 (551)
Q Consensus 398 ~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 438 (551)
+.|+|||+|||++. .++..|..||++||.+|++.
T Consensus 342 ------s~~~vya~GD~~~~-~~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 342 ------IKDGIYVAGSAVSI-KPHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp ------EETTEEECSTTTCC-CCHHHHHHHHHHHHHHHHHH
T ss_pred ------cCCCEEEEeccCCc-cCHHHHHHHHHHHHHHHHHH
Confidence 46999999999976 57889999999999999863
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=1.7e-25 Score=239.20 Aligned_cols=191 Identities=18% Similarity=0.233 Sum_probs=132.7
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCccccc---CCc---cCChhhHhhHHHHHHHHhhhhhhhcCc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVN---RGC---VPSKALLAVSGRMRELQSEHHMKALGL 171 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~---~g~---~p~~~~~~~~~~~~~~~~~~~~~~~g~ 171 (551)
..++||+|||||++|+++|..|++.|++|+|||+ +.+||+|.. .+| +|++.+...... .....+.+
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~-------~~~~~~~~ 91 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSP-------ELEQEWNW 91 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCH-------HHHHHCCC
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccc-------ccccCCCC
Confidence 3458999999999999999999999999999999 889999973 355 565544322110 00111222
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCe--EEEece-EEEe---C---CcEEEeCcceEEEeCeEEEeCC--
Q 008850 172 QVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGV--DILTGV-GTIL---G---PQKVKFGTDNIVTAKDIIIATG-- 240 (551)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~-~~~~---~---~~~v~~~~g~~i~~d~lVlAtG-- 240 (551)
. ....+..++..+ +...+++.++ ++..++ +..+ + .+.|.+.+|+++.||+||+|||
T Consensus 92 ~--~~~~~~~ei~~y-----------l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 92 S--EKYATQPEILAY-----------LEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp S--SSSCBHHHHHHH-----------HHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred c--cCCCCHHHHHHH-----------HHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 1 112344444443 3344444555 455543 2221 2 2478888888899999999999
Q ss_pred CCCCCCCCcc---CCCceeecchhh-hccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC-CCCCC
Q 008850 241 SVPFVPKGIE---VDGKTVITSDHA-LKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL-MPGFD 309 (551)
Q Consensus 241 ~~p~~p~~~~---~~~~~v~~~~~~-~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-l~~~~ 309 (551)
+.|..|++++ +.+..+++..+. ......+|+|+|||+|.+|+|+|..|++.+.+||+++|.+.+ +|.++
T Consensus 159 s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~ 232 (549)
T 4ap3_A 159 SNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGN 232 (549)
T ss_dssp EECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC-
T ss_pred CCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcC
Confidence 7788776655 345556776655 355567899999999999999999999999999999999874 44443
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=2.5e-25 Score=238.70 Aligned_cols=192 Identities=21% Similarity=0.239 Sum_probs=125.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHH-hhhhhhhcCccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQ-SEHHMKALGLQVHAAG 177 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~ 177 (551)
..+||+|||||++|+++|..|++.|++|+|||+ +.+||+|. .+|.|..........+ .+. .......+.+. ...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~-~~~~pg~~~d~~~~~~-~~~f~~~~~~~~~~~--~~~ 90 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY-WNRYPGARCDIESIEY-CYSFSEEVLQEWNWT--ERY 90 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCTTCBCSSCTTTS-SCCSCHHHHHHCCCC--BSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-ccCCCceeeccccccc-ccccChhhhhccCcc--ccc
Confidence 358999999999999999999999999999999 78999995 3445532211000000 000 00001112221 112
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EE---EeC---CcEEEeCcceEEEeCeEEEeCC--CCCCCCCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GT---ILG---PQKVKFGTDNIVTAKDIIIATG--SVPFVPKG 248 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~---~~~---~~~v~~~~g~~i~~d~lVlAtG--~~p~~p~~ 248 (551)
.+..++.+|+....+++. .++++..++ +. ..+ .+.|.+.+|+++.||+||+||| +.|..|++
T Consensus 91 ~~~~~i~~yl~~~~~~~~---------l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i 161 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFD---------LRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNF 161 (542)
T ss_dssp CBHHHHHHHHHHHHHHTT---------GGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCC
T ss_pred CCHHHHHHHHHHHHHHcC---------CCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCC
Confidence 344555555444333321 123344442 21 122 2567777888899999999999 56777765
Q ss_pred cc---CCCceeecchhh-hccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 249 IE---VDGKTVITSDHA-LKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 249 ~~---~~~~~v~~~~~~-~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
++ +.+..+++..+. ......+|+|+|||+|.+|+|++..|++.+.+|+++.|.+.+
T Consensus 162 ~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 162 PGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp TTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 54 445556666554 224556899999999999999999999999999999998766
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.86 E-value=1.7e-20 Score=198.89 Aligned_cols=321 Identities=19% Similarity=0.179 Sum_probs=180.5
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCC--------------cEEEeeC-CccCcccc----cCCc---c----------
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVEKGL--------------KTAIIEG-DVVGGTCV----NRGC---V---------- 145 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~--------------~V~liE~-~~~GG~~~----~~g~---~---------- 145 (551)
....|||||||+||+||++|+.|.+.|. ..+.+|+ +.++ |. ..++ +
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~ 113 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLR 113 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTT
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhcccc
Confidence 3456999999999999999999987643 4566776 3332 21 1111 0
Q ss_pred -CChhhHhhHHHHHHHHhhhhhhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee------
Q 008850 146 -PSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL------ 217 (551)
Q Consensus 146 -p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~------ 217 (551)
|...+-... -+.....+..| .......+.+.++.+|++++++++ +..+..++.+ .+
T Consensus 114 ~P~s~~sf~~----yl~~~~rl~~f-~~~~~~~p~r~E~~~Yl~~~A~~~-----------~~~vrf~~~V~~v~~~~~~ 177 (501)
T 4b63_A 114 DPRSSFTFLN----YLHQKGRLIHF-TNLSTFLPARLEFEDYMRWCAQQF-----------SDVVAYGEEVVEVIPGKSD 177 (501)
T ss_dssp CTTCTTSHHH----HHHHHTCHHHH-HTTCCSCCBHHHHHHHHHHHHHTT-----------GGGEEESEEEEEEEEECSS
T ss_pred CCCCccchHH----HHHHhCCccCC-ccccCCCCCHHHHHHHHHHHHHHc-----------CCceEcceEEEeecccccc
Confidence 111110000 00000000011 001112345667777776666553 2233333321 11
Q ss_pred ------CCcEEEeCc-----ceEEEeCeEEEeCCCCCCCCCCccCCCceeecchhhhcc------ccCCceEEEECCChh
Q 008850 218 ------GPQKVKFGT-----DNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKL------EFVPDWIAIVGSGYI 280 (551)
Q Consensus 218 ------~~~~v~~~~-----g~~i~~d~lVlAtG~~p~~p~~~~~~~~~v~~~~~~~~~------~~~~k~v~VvG~G~~ 280 (551)
+.+.|++.+ ..++.+++||+|||..|.+|+..++.+..++++++.... ...+|+|+|||+|.+
T Consensus 178 ~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~S 257 (501)
T 4b63_A 178 PSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQS 257 (501)
T ss_dssp TTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHH
T ss_pred ccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHH
Confidence 125666543 256899999999999999998877777766666655432 356899999999999
Q ss_pred HHHHHHHHHhC--CCeEEEEcccCcCCCC---------CCHHHH-----------HHHH---------------------
Q 008850 281 GLEFSDVYTAL--GSEVTFIEALDQLMPG---------FDPEIG-----------KLAQ--------------------- 317 (551)
Q Consensus 281 g~e~A~~l~~~--g~~Vtlv~~~~~~l~~---------~~~~~~-----------~~~~--------------------- 317 (551)
|+|++..|++. +.+|+++.|++.+.|. +.++.. ..+.
T Consensus 258 A~ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~ 337 (501)
T 4b63_A 258 AAEIFHDLQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYN 337 (501)
T ss_dssp HHHHHHHHHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHH
Confidence 99999999875 7899999998866542 111111 1100
Q ss_pred ----HHHhC----CCceEEEeceEEE-----eCCCcEEEEEecc------cCCCCCeEEecCEEEEeecCCCCCC-C-CC
Q 008850 318 ----RVLIN----PRKIDYHTGVFAT-----KDGKPVTIELIDA------KTKEPKDTLEVDAALIATGRAPFTN-G-LG 376 (551)
Q Consensus 318 ----~~l~~----~~gi~~~~~~~~~-----~~~~~~~v~~~~g------~~~~~~~~i~~D~vi~a~G~~p~~~-~-l~ 376 (551)
+.+.. .....+..+..+. .....+.+++... ...++++++++|.||+|||++|+.. + +.
T Consensus 338 ~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~ 417 (501)
T 4b63_A 338 DMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLS 417 (501)
T ss_dssp HHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTG
T ss_pred HHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcc
Confidence 00100 0112344443333 1223333433211 1123346899999999999998864 1 21
Q ss_pred Ccccccc-cCCCceeeCCCCccccCCC--CCCCcEEEecCCC-----CCCCcHHHHHHHHHHHHHHHcCC
Q 008850 377 LENINVV-TQRGFVPVDERMRVIDANG--NLVPHLYCIGDAN-----GKMMLAHAASAQGISVVEQVTGR 438 (551)
Q Consensus 377 l~~~~l~-~~~G~i~Vd~~~~~~~~~~--t~~~~IyA~GD~~-----~~~~~~~~A~~~g~~aa~~i~g~ 438 (551)
.. ..+. ...|...|+.+.++.-.++ ...++||+.|-+- +.+.+...|.+.+++ ++.|+|+
T Consensus 418 ~~-~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I-~~~l~g~ 485 (501)
T 4b63_A 418 KV-QHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEM-VQSIFGE 485 (501)
T ss_dssp GG-GGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHH-HHHHHHH
T ss_pred hh-hhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHH-HHHHhcc
Confidence 11 1122 2567788888766531111 2346799999542 235566778887765 4566664
No 94
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.83 E-value=1.2e-21 Score=206.16 Aligned_cols=305 Identities=15% Similarity=0.199 Sum_probs=175.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCccc----------ccCCccCChhhHhhH---------HHHH-----
Q 008850 103 DLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTC----------VNRGCVPSKALLAVS---------GRMR----- 158 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~----------~~~g~~p~~~~~~~~---------~~~~----- 158 (551)
||+|||||++|+++|+.|++.|++|+||||...||.. .+..+.|.+.+.... ..++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 7999999999999999999999999999997555542 222333332221110 0000
Q ss_pred HHHhhhhhhhcCccccc-----cccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEe--CCcEE---EeC-cc
Q 008850 159 ELQSEHHMKALGLQVHA-----AGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTIL--GPQKV---KFG-TD 227 (551)
Q Consensus 159 ~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~v---~~~-~g 227 (551)
......++..+|+++.. ....+.............+...+...+++.|++++.++...+ +...+ .+. ++
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v~l~~~~~~v~Gv~v~~~~ 160 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLVEIRVKDGKVTGFVTEKRG 160 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEEEEEEETTEEEEEEETTTE
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEeCCEEEEEEEEeCC
Confidence 11223455566665432 111100000000001234444555556678999998862232 22332 332 23
Q ss_pred eEEEeCeEEEeCCCCCCCCCCc----cCCCceeecch----hhhccccCC--ceEEEECCChhHHHHHHHHHhCCCeEEE
Q 008850 228 NIVTAKDIIIATGSVPFVPKGI----EVDGKTVITSD----HALKLEFVP--DWIAIVGSGYIGLEFSDVYTALGSEVTF 297 (551)
Q Consensus 228 ~~i~~d~lVlAtG~~p~~p~~~----~~~~~~v~~~~----~~~~~~~~~--k~v~VvG~G~~g~e~A~~l~~~g~~Vtl 297 (551)
.++.+|.||+|||+.+..++.. ...+.++..+. .+.++++.+ ..++++|+| +++++..++..|..+ +
T Consensus 161 g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v 237 (472)
T 2e5v_A 161 LVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-I 237 (472)
T ss_dssp EECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-E
T ss_pred CeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-E
Confidence 4578999999999987665432 22232221110 011222221 234556766 888999999999888 8
Q ss_pred EcccCcCCCCCCHHH--------HHHHHHHHhCCCceEEEeceEEEeCCCcEEEEEecccCCCCCeEEe-cCEEEEeecC
Q 008850 298 IEALDQLMPGFDPEI--------GKLAQRVLINPRKIDYHTGVFATKDGKPVTIELIDAKTKEPKDTLE-VDAALIATGR 368 (551)
Q Consensus 298 v~~~~~~l~~~~~~~--------~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~i~-~D~vi~a~G~ 368 (551)
..++++|++.++++. +..+.+.+++ .+. ++++... .+ . + ...++ .|.++++.|.
T Consensus 238 ~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~-~~~-v~ld~~~-~~-~-----~--------~~~~~~~~~~~~~~G~ 300 (472)
T 2e5v_A 238 NENGERFLFNYDKRGELAPRDILSRAIYIEMLK-GHK-VFIDLSK-IE-D-----F--------ERKFPVVAKYLARHGH 300 (472)
T ss_dssp ETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHH-TCC-EEEECTT-CT-T-----H--------HHHCHHHHHHHHHTTC
T ss_pred CCCCCCCCccCCcccCcCchhHHHHHHHHHHHh-CCc-EEEeccc-hH-H-----H--------HHHhHHHHHHHHHhCc
Confidence 888999997766543 4555555544 332 2221100 00 0 0 01233 4677888899
Q ss_pred CCCCCCCCCcccccccCCCceeeCCCCccccCCCCCCCcEEEecCCCC-CC----CcHHHHHHHHHHHHHHH
Q 008850 369 APFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLVPHLYCIGDANG-KM----MLAHAASAQGISVVEQV 435 (551)
Q Consensus 369 ~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~-~~----~~~~~A~~~g~~aa~~i 435 (551)
.|+ +.+.+.... ....|+|.||+++| |++|||||+|||++ .. +++..+..++.+.++++
T Consensus 301 dp~-~~i~v~p~~-~~~~GGI~vd~~~~------t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a 364 (472)
T 2e5v_A 301 NYK-VKIPIFPAA-HFVDGGIRVNIRGE------SNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINL 364 (472)
T ss_dssp CTT-SCEECEEEE-EEESCEEECCTTCB------CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHG
T ss_pred Ccc-cceEeehhh-ceeCCCeEECCCCc------cccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHH
Confidence 999 655332221 23578899999999 89999999999976 32 67777777765555544
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.83 E-value=1.8e-20 Score=171.05 Aligned_cols=148 Identities=18% Similarity=0.262 Sum_probs=121.6
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC---------CC-----CHHHHHHHHHHHhCCCceEEEeceEEE-
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP---------GF-----DPEIGKLAQRVLINPRKIDYHTGVFAT- 335 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------~~-----~~~~~~~~~~~l~~~~gi~~~~~~~~~- 335 (551)
+++|||+|++|+++|..|++.|.+|+++++.+.+++ .+ ++++.+.+.+.+++ .||+++.+ .+.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~gv~v~~~-~v~~ 80 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR-YGAEVRPG-VVKG 80 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH-TTCEEEEC-CCCE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH-cCCEEEeC-EEEE
Confidence 699999999999999999999999999999886652 23 46788888888886 89999998 554
Q ss_pred --eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCCCCcEEEecC
Q 008850 336 --KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLVPHLYCIGD 413 (551)
Q Consensus 336 --~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD 413 (551)
.+++...+++.++ ++++|.||+|+|..|+.. +..++..++|+|.||+++| |+.|+|||+||
T Consensus 81 i~~~~~~~~v~~~~g-------~i~ad~vI~A~G~~~~~~----~~~g~~~~~g~i~vd~~~~------t~~~~i~a~GD 143 (180)
T 2ywl_A 81 VRDMGGVFEVETEEG-------VEKAERLLLCTHKDPTLP----SLLGLTRRGAYIDTDEGGR------TSYPRVYAAGV 143 (180)
T ss_dssp EEECSSSEEEECSSC-------EEEEEEEEECCTTCCHHH----HHHTCCEETTEECCCTTCB------CSSTTEEECGG
T ss_pred EEEcCCEEEEEECCC-------EEEECEEEECCCCCCCcc----ccCCCCccCceEEeCCCCC------cCCCCEEEeec
Confidence 3344455654332 789999999999999641 3334444588999999999 89999999999
Q ss_pred CCCCCC-cHHHHHHHHHHHHHHHcC
Q 008850 414 ANGKMM-LAHAASAQGISVVEQVTG 437 (551)
Q Consensus 414 ~~~~~~-~~~~A~~~g~~aa~~i~g 437 (551)
|+..+. +++.|..||+++|.||.+
T Consensus 144 ~~~~~~~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 144 ARGKVPGHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp GGTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccCcchhhHHHHHHhHHHHHHHHHH
Confidence 998866 999999999999999985
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.74 E-value=2.5e-18 Score=176.83 Aligned_cols=195 Identities=21% Similarity=0.255 Sum_probs=115.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-Ccc--------Cccc--ccCCccCChhhHhhHHH----HH---HHH
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVV--------GGTC--VNRGCVPSKALLAVSGR----MR---ELQ 161 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~--------GG~~--~~~g~~p~~~~~~~~~~----~~---~~~ 161 (551)
.++||+|||||++|+++|..|++.|.+|+|||+ +.+ ||.| .+.+|.|.+.+...... +. ...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 358999999999999999999999999999999 556 4566 34455554322110000 00 011
Q ss_pred hhhhhhhcCccccccc----cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE--Ee-C----C--cEEEeCcce
Q 008850 162 SEHHMKALGLQVHAAG----YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGT--IL-G----P--QKVKFGTDN 228 (551)
Q Consensus 162 ~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~-~----~--~~v~~~~g~ 228 (551)
...++..+|++..... +... ....+...+...+++.||+++.++.. .. + . ..|.+.++
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~--------~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g- 153 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDE--------GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST- 153 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETT--------CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-
T ss_pred HHHHHHhCCCceEECcCCEEccCC--------CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-
Confidence 1234455565432110 1000 11334445556667789999988633 22 2 2 34556655
Q ss_pred EEEeCeEEEeCCCCCCC--------------------CCCccCCCceeecch-hh-hcc--ccCCceEEEEC--------
Q 008850 229 IVTAKDIIIATGSVPFV--------------------PKGIEVDGKTVITSD-HA-LKL--EFVPDWIAIVG-------- 276 (551)
Q Consensus 229 ~i~~d~lVlAtG~~p~~--------------------p~~~~~~~~~v~~~~-~~-~~~--~~~~k~v~VvG-------- 276 (551)
++.+|+||+|||+.+.. |..+...... ++.. .+ ..+ ...+.++.|+|
T Consensus 154 ~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~-~~~~~~~~~~l~g~~~~~~~~i~G~~~~~g~~ 232 (401)
T 2gqf_A 154 QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFT-YRETDKFLTALSGISLPVTITALCGKSFYNQL 232 (401)
T ss_dssp EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEE-CCGGGGGGGGGTTCEEEEEEEETTSCEEEEEE
T ss_pred EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeecee-cCCchhhcccCCCeeeeeEEEEcCCceEEeCE
Confidence 79999999999988731 2111111111 1222 23 222 22356676779
Q ss_pred -------CChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCH
Q 008850 277 -------SGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDP 310 (551)
Q Consensus 277 -------~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~ 310 (551)
+|+++++++..+.+ |.+|++ .++|.++.
T Consensus 233 l~t~~g~sG~~~l~~s~~~~~-~~~~~i-----~~~p~~~~ 267 (401)
T 2gqf_A 233 LFTHRGISGPAVLQISNYWQP-TESVEI-----DLLPNHNV 267 (401)
T ss_dssp EECSSEEESHHHHHHTTTCCT-TCCEEE-----ESCSSSCH
T ss_pred EEECCCccHHHHHHHHHHHhc-CCEEEE-----ECCCCCCH
Confidence 89999999998876 777776 46776664
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.7e-20 Score=188.16 Aligned_cols=245 Identities=18% Similarity=0.076 Sum_probs=148.6
Q ss_pred CcccEEEECCChHHHHHHHHHHH--cCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVE--KGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAA 176 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~--~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 176 (551)
.++||+|||||||||+||++|++ .|++|+|||+ +.+||.|.+.+|++++..+...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~---------------------- 121 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKP---------------------- 121 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETT----------------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHH----------------------
Confidence 35899999999999999999975 5999999999 7899999998888766543210
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCC---ccCCC
Q 008850 177 GYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKG---IEVDG 253 (551)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~---~~~~~ 253 (551)
....+++.|+++..+. ......+.++++++..+..++. ..+.+
T Consensus 122 ---------------------~~~~~~e~Gv~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (326)
T 3fpz_A 122 ---------------------AHLFLQELEIPYEDEG-------------DYVVVKHAALFISTVLSKVLQLPNVKLFNA 167 (326)
T ss_dssp ---------------------THHHHHHTTCCCEECS-------------SEEEESCHHHHHHHHHHHHHTSTTEEEETT
T ss_pred ---------------------HHHHHHHcCCEEEECC-------------cceecceeEEEEcchhhhccccccceeecc
Confidence 0012233566654321 2233444555666655443322 22333
Q ss_pred ceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceE
Q 008850 254 KTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVF 333 (551)
Q Consensus 254 ~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~ 333 (551)
..+..+.........+++++|+|+|.++++.|..+...+.++++..+......... ... . . ...
T Consensus 168 ~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~----------~~~-~-~----~~~ 231 (326)
T 3fpz_A 168 TCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRD----------LSQ-K-H----GVI 231 (326)
T ss_dssp EEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBC----------TTS-C-C----CEE
T ss_pred cccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeeccccccccc----------cee-e-c----ceE
Confidence 33333333344445678999999999999999999999999999887654422100 000 0 0 000
Q ss_pred EEeCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCCCCCCcccccccCCCceeeCCCCccccCCCCCCCcEEEecC
Q 008850 334 ATKDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLVPHLYCIGD 413 (551)
Q Consensus 334 ~~~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD 413 (551)
+...+....+. .. .....+.+|.++.+.|.+|.. +....+.|.+|+.++ |++|||||+||
T Consensus 232 ~~~~g~~~~~~-~~----~~~~~~~~~~~~~~~g~~~~~---------~~~~e~~iv~~~~~~------t~vpGv~aaGD 291 (326)
T 3fpz_A 232 LSTTGHDGPFG-AF----CAKRIVDIDQNQKLGGMKGLD---------MNHAEHDVVIHSGAY------AGVDNMYFAGM 291 (326)
T ss_dssp EECCCSCSSSC-SH----HHHHHHHHCTTCCCCCCCCBC---------HHHHHHHHHHHCEEC------TTSBTEEECTH
T ss_pred EEEecceeeEe-ec----ceeEEEecCceeeecceeccc---------ccccCCeEEECCCeE------ECCCCEEEEch
Confidence 11000000000 00 001234455555556655422 223345688888888 89999999999
Q ss_pred CCC----CC---CcHHHHHHHHHHHHHHHc
Q 008850 414 ANG----KM---MLAHAASAQGISVVEQVT 436 (551)
Q Consensus 414 ~~~----~~---~~~~~A~~~g~~aa~~i~ 436 (551)
+++ .+ +....++.+|+.||+.|+
T Consensus 292 aa~~v~g~~rmGp~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 292 EVAELDGLNRMGPTFGAMALSGVHAAEQIL 321 (326)
T ss_dssp HHHHHHTCCBCCSCCHHHHHHHHHHHHHHH
T ss_pred HhccccCCCcCchHHHHHHHHHHHHHHHHH
Confidence 863 11 133456778999999885
No 98
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.57 E-value=5e-14 Score=150.39 Aligned_cols=168 Identities=20% Similarity=0.253 Sum_probs=102.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC--ccCcccccCCccCChhhHhhHHHHHHHHhh-----hhhhhcCcc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD--VVGGTCVNRGCVPSKALLAVSGRMRELQSE-----HHMKALGLQ 172 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~--~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~g~~ 172 (551)
.++||+|||||+||++||..|++.|.+|+|||+. .+| +.+|.|+..........+.+... ......++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG----~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG----QMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT----CCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc----cccccccccchhhHHHHHHHHHhccHHHHHhhhcccc
Confidence 3589999999999999999999999999999984 344 35677765433222222222110 001111111
Q ss_pred ccc-------------cccCHHHHHHHHHHHHHHHHHHHHHHHHH-cCeEEEeceEEEe--CCc---EEEeCcceEEEeC
Q 008850 173 VHA-------------AGYDRQGVADHANNLATKIRNNLTNSMKA-LGVDILTGVGTIL--GPQ---KVKFGTDNIVTAK 233 (551)
Q Consensus 173 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~~~---~v~~~~g~~i~~d 233 (551)
+.. ...+. ..+...+...+++ .|++++.+.+..+ +.. .|.+.+|.++.+|
T Consensus 103 f~~l~~~kgpav~~~r~~~Dr-----------~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad 171 (651)
T 3ces_A 103 FRILNASKGPAVRATRAQADR-----------VLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAK 171 (651)
T ss_dssp EEEESTTSCGGGCEEEEEECH-----------HHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEE
T ss_pred hhhhhcccCcccccchhhCCH-----------HHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECC
Confidence 100 01122 2234445556666 6999988777654 332 4566777889999
Q ss_pred eEEEeCCCCCCCCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEc
Q 008850 234 DIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIE 299 (551)
Q Consensus 234 ~lVlAtG~~p~~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~ 299 (551)
.||+|||..+..+..++... + .+.+ +| |.++++++..|.+.|.+|+.+.
T Consensus 172 ~VVLATGt~s~~~~i~G~~~---~----------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 172 AVVLTVGTFLDGKIHIGLDN---Y----------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp EEEECCSTTTCCEEECC------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred EEEEcCCCCccCccccCccc---C----------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 99999999876554333221 0 1333 56 7899999999999999998874
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.46 E-value=5.2e-15 Score=154.03 Aligned_cols=121 Identities=15% Similarity=0.132 Sum_probs=78.1
Q ss_pred hHHHHHHHHHhCCCeEEE-EcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCe
Q 008850 280 IGLEFSDVYTALGSEVTF-IEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKD 355 (551)
Q Consensus 280 ~g~e~A~~l~~~g~~Vtl-v~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~ 355 (551)
+..+++..+...+..++. +..... .++..+...+...+++ .| ++++++.+. .+++.+.|++.++ +
T Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~l~~~~~~~-~g-~i~~~~~V~~i~~~~~~v~v~~~~g------~ 244 (431)
T 3k7m_X 176 SALWMLQLVAAHHYSILGVVLSLDE---VFSNGSADLVDAMSQE-IP-EIRLQTVVTGIDQSGDVVNVTVKDG------H 244 (431)
T ss_dssp BHHHHHHHHHHTTSCHHHHHHTCCE---EETTCTHHHHHHHHTT-CS-CEESSCCEEEEECSSSSEEEEETTS------C
T ss_pred hHHHHHHHHHhcCCccceeecchhh---hcCCcHHHHHHHHHhh-CC-ceEeCCEEEEEEEcCCeEEEEECCC------C
Confidence 345555555555544433 222111 2234455666666665 77 999998877 3455677777654 4
Q ss_pred EEecCEEEEeec--------CCCCCCCCCCcccccccCCCceeeCCCCccccCCCCCCCcEEEecCCCCC
Q 008850 356 TLEVDAALIATG--------RAPFTNGLGLENINVVTQRGFVPVDERMRVIDANGNLVPHLYCIGDANGK 417 (551)
Q Consensus 356 ~i~~D~vi~a~G--------~~p~~~~l~l~~~~l~~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~ 417 (551)
++.+|.||+|+| +.|+.+....+..+.......++|+..++ |+.++||+.||+...
T Consensus 245 ~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~------~~~~~i~~~~d~~~~ 308 (431)
T 3k7m_X 245 AFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVR------GAEAGIECVGDGIFP 308 (431)
T ss_dssp CEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEE------SCCTTEEEEBSSSSS
T ss_pred EEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEEC------CCCcCceEcCCCCEE
Confidence 699999999999 88887644333332222334589999998 788999999998543
No 100
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.43 E-value=1.3e-11 Score=131.24 Aligned_cols=167 Identities=20% Similarity=0.259 Sum_probs=103.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC--ccCcccccCCccCChhhHhhHHHHHHHHhh-----hhhhhcCccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD--VVGGTCVNRGCVPSKALLAVSGRMRELQSE-----HHMKALGLQV 173 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~--~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~g~~~ 173 (551)
++||+|||||+||++||..|++.|++|+|||+. .+|+ .+|.|+..........+.+... ......++.+
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~----~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ----MSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC----cCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 589999999999999999999999999999994 4553 4677754332222222211110 0111111111
Q ss_pred cc------c-------ccCHHHHHHHHHHHHHHHHHHHHHHHHH-cCeEEEeceEEEe--CCc---EEEeCcceEEEeCe
Q 008850 174 HA------A-------GYDRQGVADHANNLATKIRNNLTNSMKA-LGVDILTGVGTIL--GPQ---KVKFGTDNIVTAKD 234 (551)
Q Consensus 174 ~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~~~---~v~~~~g~~i~~d~ 234 (551)
.. + ..+. ..+...+...+++ .|++++.+.+..+ +.. .|.+.+|.++.+|.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr-----------~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~Ada 171 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADK-----------KRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKA 171 (637)
T ss_dssp EEESTTSCGGGCEEEEEECH-----------HHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSE
T ss_pred eecccccCccccchhhhCCH-----------HHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCE
Confidence 00 0 1122 2334445555666 5999988777643 222 36677788899999
Q ss_pred EEEeCCCCCCCCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEc
Q 008850 235 IIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIE 299 (551)
Q Consensus 235 lVlAtG~~p~~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~ 299 (551)
||+|||..+..+..++.. .+. +.+ +| +.++++++..|.+.|.+|+.+.
T Consensus 172 VVLATG~~s~~~~~~G~~---~~~----------~Gr---~G-~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 172 VVVTTGTFLNGVIYIGDK---MIP----------GGR---LG-EPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp EEECCTTCBTCEEEETTE---EEE----------CSB---TT-BCCBCTHHHHHHHTTCCCEEEE
T ss_pred EEEccCCCccCceeccce---ecC----------CCC---CC-chhHHHHHHHHHhcCCceEEec
Confidence 999999987655433221 111 222 33 5678999999999998776653
No 101
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.42 E-value=4.8e-13 Score=126.86 Aligned_cols=155 Identities=17% Similarity=0.173 Sum_probs=102.1
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC-----------------CCC-------CHHHHHHHHHHHhCCCc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM-----------------PGF-------DPEIGKLAQRVLINPRK 325 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l-----------------~~~-------~~~~~~~~~~~l~~~~g 325 (551)
..|+|||+|++|+++|..|++.|.+|+++++..... ..+ ..++.+.+.+.+++..|
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 469999999999999999999999999999862110 001 12566777787876239
Q ss_pred eEEEeceEEE---eCCCc-EEEEEecccCCCCCeEEecCEEEEeecCCCCCCCC-C--------------------Cccc
Q 008850 326 IDYHTGVFAT---KDGKP-VTIELIDAKTKEPKDTLEVDAALIATGRAPFTNGL-G--------------------LENI 380 (551)
Q Consensus 326 i~~~~~~~~~---~~~~~-~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~l-~--------------------l~~~ 380 (551)
++++.. .+. .+++. ..+.+.++ +++.+|.||+|+|..++.... + +.+.
T Consensus 84 v~i~~~-~v~~i~~~~~~v~~v~~~~g------~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~ 156 (232)
T 2cul_A 84 LHLFQA-TATGLLLEGNRVVGVRTWEG------PPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRL 156 (232)
T ss_dssp EEEEEC-CEEEEEEETTEEEEEEETTS------CCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHT
T ss_pred cEEEEe-EEEEEEEeCCEEEEEEECCC------CEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhC
Confidence 999854 444 23333 34665544 479999999999985543210 0 0011
Q ss_pred ccccCC---------Cc-------eeeC----C--CCccccCCCCCCCcEEEecCCCCCCCcHHHHHHHHHHHHHHHcC
Q 008850 381 NVVTQR---------GF-------VPVD----E--RMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 381 ~l~~~~---------G~-------i~Vd----~--~~~~~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 437 (551)
++...+ |. ..+. + .+.. |++|||||+|||+ .......|+.||+.+|.+|..
T Consensus 157 g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~-----t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 157 GFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRL-----KRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp TCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEE-----TTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEccccccCcCCCCCCccCchhhcccCCCCCccccc-----cccccceeeeecc-cCccHHHHHHHHHHHHHHHHh
Confidence 111110 00 0011 0 1111 7899999999999 777888999999999999964
No 102
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.22 E-value=3.6e-11 Score=129.73 Aligned_cols=34 Identities=41% Similarity=0.540 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC--CcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKG--LKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g--~~V~liE~~ 133 (551)
..+||||||||+||+++|+.|++.| ++|+||||.
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~ 39 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKV 39 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 3589999999999999999999999 999999994
No 103
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.20 E-value=5.9e-11 Score=126.53 Aligned_cols=37 Identities=27% Similarity=0.512 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGG 137 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG 137 (551)
..+||||||||+||++||+.|++ |.+|+||||. ..+|
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 45899999999999999999999 9999999994 4443
No 104
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.15 E-value=3.6e-10 Score=120.69 Aligned_cols=168 Identities=21% Similarity=0.269 Sum_probs=102.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC--ccCcccccCCccCChhhHhhHHHHHHHHhh-----hhhhhcCcc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD--VVGGTCVNRGCVPSKALLAVSGRMRELQSE-----HHMKALGLQ 172 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~--~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~g~~ 172 (551)
..|||+|||||+||++||..|++.|.+|+|||+. .+|+ .+|.|+..........+.+... ......++.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~----~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~ 95 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR----MSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQ 95 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC----CccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCc
Confidence 4599999999999999999999999999999994 4554 4567765433222222222110 011111111
Q ss_pred ccc------c-------ccCHHHHHHHHHHHHHHHHHHHHHHHHH-cCeEEEeceEEEe--CCcE---EEeCcceEEEeC
Q 008850 173 VHA------A-------GYDRQGVADHANNLATKIRNNLTNSMKA-LGVDILTGVGTIL--GPQK---VKFGTDNIVTAK 233 (551)
Q Consensus 173 ~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~~~~---v~~~~g~~i~~d 233 (551)
+.. + ..+.. .+...+...+++ .|++++.+.+..+ +... |.+.+|.++.+|
T Consensus 96 f~~l~~~kgpav~~~r~~~Dr~-----------~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad 164 (641)
T 3cp8_A 96 FRMLNRSKGPAMHSPRAQADKT-----------QYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAK 164 (641)
T ss_dssp EEEECSSSCTTTCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEE
T ss_pred hhhcccccCccccchhhhcCHH-----------HHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeC
Confidence 100 0 12221 233444555555 4999988876643 2322 566777889999
Q ss_pred eEEEeCCCCCCCCCCccCCCceeecchhhhccccCCceEEEECCChhHHHHHHHHHhCCCeEEEE
Q 008850 234 DIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFI 298 (551)
Q Consensus 234 ~lVlAtG~~p~~p~~~~~~~~~v~~~~~~~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv 298 (551)
.||+|||..+..+...+. .-+. +.++ + |+.++++++..|.+.|.+|..+
T Consensus 165 ~VVLATG~~s~~~i~~G~---~~~~----------~g~~--v-G~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 165 AAILACGTFLNGLIHIGM---DHFP----------GGRS--T-AEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp EEEECCTTCBTCEEEETT---EEEE----------CSSS--T-TSCCBCSHHHHHHHTTCCEEEE
T ss_pred EEEECcCCCCCccceeee---eeec----------cccc--c-CCchhhhhHHHHHhCCceEEee
Confidence 999999998764321111 0110 1122 1 4678899999999999988755
No 105
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.13 E-value=2e-10 Score=124.61 Aligned_cols=35 Identities=31% Similarity=0.567 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHc------CCcEEEeeCCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK------GLKTAIIEGDV 134 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~------g~~V~liE~~~ 134 (551)
..+||||||||.|||+||+.|++. |.+|+||||..
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 458999999999999999999998 99999999943
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.10 E-value=3.7e-10 Score=116.33 Aligned_cols=139 Identities=22% Similarity=0.276 Sum_probs=78.9
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCc--------ccccC--CccCChhh-------HhhHHHHHH
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGG--------TCVNR--GCVPSKAL-------LAVSGRMRE 159 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG--------~~~~~--g~~p~~~~-------~~~~~~~~~ 159 (551)
++.++||+|||||++|+++|..|++.|++|+|||+ +.+|+ .|... .+.|...+ ......+..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 34568999999999999999999999999999999 55543 44321 12221110 000011111
Q ss_pred HHhhhhhhhcCcccccccc--CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe----CCcEEEeCcceEEEe
Q 008850 160 LQSEHHMKALGLQVHAAGY--DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL----GPQKVKFGTDNIVTA 232 (551)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~----~~~~v~~~~g~~i~~ 232 (551)
.....++...|++...... .+.. .....+...+...+++.|++++.++. ..+ +...|.+.++ ++.+
T Consensus 104 ~~~~~~~~~~Gi~~~~~~~g~~~~~------~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~a 176 (417)
T 3v76_A 104 QDFVALVERHGIGWHEKTLGQLFCD------HSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDA 176 (417)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEES------SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEE
T ss_pred HHHHHHHHHcCCCcEEeeCCEEeeC------CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEe
Confidence 1122344445544221110 0000 00134444556666777999998752 222 2245666666 8999
Q ss_pred CeEEEeCCCCC
Q 008850 233 KDIIIATGSVP 243 (551)
Q Consensus 233 d~lVlAtG~~p 243 (551)
|+||+|||..+
T Consensus 177 d~VIlAtG~~S 187 (417)
T 3v76_A 177 ASLVVASGGKS 187 (417)
T ss_dssp SEEEECCCCSS
T ss_pred eEEEECCCCcc
Confidence 99999999875
No 107
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.06 E-value=6e-10 Score=105.38 Aligned_cols=117 Identities=16% Similarity=0.240 Sum_probs=72.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
++||+|||||++|+++|..|++.|.+|+|||+. ...|.+ |.|...-+......+.+. ... ..+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~----~~~~~~~~~~~~~~~~~~-----d~~-------g~~ 66 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMP----FLPPKPPFPPGSLLERAY-----DPK-------DER 66 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC----SSCCCSCCCTTCHHHHHC-----CTT-------CCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcc----cCccccccchhhHHhhhc-----cCC-------CCC
Confidence 489999999999999999999999999999993 333322 222210000000000000 000 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CeEEEeceEEEe---CCc--EEEeCcceEEEeCeEEEeCCCCCC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKAL-GVDILTGVGTIL---GPQ--KVKFGTDNIVTAKDIIIATGSVPF 244 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~---~~~--~v~~~~g~~i~~d~lVlAtG~~p~ 244 (551)
. ..+...+.+.+++. +++++...+..+ +.. .+.+.++.++.+|.||+|+|..+.
T Consensus 67 ~-----------~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 67 V-----------WAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp H-----------HHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred H-----------HHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 1 23444555666666 999987665433 222 466677778999999999998654
No 108
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.00 E-value=2.7e-09 Score=96.47 Aligned_cols=107 Identities=23% Similarity=0.388 Sum_probs=70.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCHH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQ 181 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 181 (551)
+||+|||||++|+.+|..|++.|.+|+|||+.. +.+.....+. ...+++ .....
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~--~~~~~~~~~~--------------------~~~~~~---~~~~~- 55 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR--SKVKGVSRVP--------------------NYPGLL---DEPSG- 55 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC--CTTTTCSCCC--------------------CSTTCT---TCCCH-
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC--CcccCchhhh--------------------ccCCCc---CCCCH-
Confidence 799999999999999999999999999999843 1110000000 000110 00111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEe----CCcEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 182 GVADHANNLATKIRNNLTNSMKALGVDILTGVGTIL----GPQKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+.+.+++.|++++.+++..+ +...+.++++ ++.+|.||+|+|..|.+
T Consensus 56 ----------~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 56 ----------EELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc
Confidence 23444555667778999998854332 2345677777 89999999999999854
No 109
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.99 E-value=1.2e-09 Score=106.63 Aligned_cols=161 Identities=15% Similarity=0.101 Sum_probs=104.3
Q ss_pred ceEEEECCChhHHHHHHHHHhC-CCeEEEEcccCcCCCC--------------------------------------CCH
Q 008850 270 DWIAIVGSGYIGLEFSDVYTAL-GSEVTFIEALDQLMPG--------------------------------------FDP 310 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 310 (551)
..|+|||+|++|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999988754211 113
Q ss_pred HHHHHHHHHHhCCCceEEEeceEEE---eCCCc-EEEEEecc-------c-CCCCCeEEecCEEEEeecCCCCCCCCCCc
Q 008850 311 EIGKLAQRVLINPRKIDYHTGVFAT---KDGKP-VTIELIDA-------K-TKEPKDTLEVDAALIATGRAPFTNGLGLE 378 (551)
Q Consensus 311 ~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~-~~v~~~~g-------~-~~~~~~~i~~D~vi~a~G~~p~~~~l~l~ 378 (551)
++...+.+.+.+..||+++.++.+. .+++. ..+.+... . ..++..++.+|.||+|+|..++.......
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 3444455555443699999998877 23332 34554310 0 11223679999999999988875422101
Q ss_pred -------ccccccCCCceeeCC-------CCccccCCCCCCCcEEEecCCCC----C---CCcHHHHHHHHHHHHHHHcC
Q 008850 379 -------NINVVTQRGFVPVDE-------RMRVIDANGNLVPHLYCIGDANG----K---MMLAHAASAQGISVVEQVTG 437 (551)
Q Consensus 379 -------~~~l~~~~G~i~Vd~-------~~~~~~~~~t~~~~IyA~GD~~~----~---~~~~~~A~~~g~~aa~~i~g 437 (551)
..++...+| +.+|. +.+ ++.|++|++||++. . .+.+..+..+|+.+|.+|..
T Consensus 200 ~~~~~g~~~~v~~~~g-~~~~~~~~~~v~~~~------~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKA-LDMNTAEDAIVRLTR------EVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHTTSSSCCCCCEE-ECHHHHHHHHHHHCE------EEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCCCcCCcCC-chhhhhhHHHhhccc------cccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 011111222 33332 223 57799999999862 1 13466788999999999874
No 110
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.95 E-value=6.1e-09 Score=101.65 Aligned_cols=129 Identities=21% Similarity=0.299 Sum_probs=78.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK-GLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~-g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
.++||+|||||++|+++|..|++. |++|+|||+ +.+||.+...+++......... ...++..+|+++....
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~-------~~~~l~~~G~~~~~~~ 110 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKP-------AHLFLDEIGVAYDEQD 110 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETT-------THHHHHHHTCCCEECS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcH-------HHHHHHHcCCCcccCC
Confidence 357999999999999999999997 999999999 6677655544444332221110 1133444555432110
Q ss_pred -c----CHHHHHHHHHHHHHHHHHHHHHHHHH-cCeEEEeceEE-Ee--CCc---EEEeC---------cc-----eEEE
Q 008850 178 -Y----DRQGVADHANNLATKIRNNLTNSMKA-LGVDILTGVGT-IL--GPQ---KVKFG---------TD-----NIVT 231 (551)
Q Consensus 178 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~-~~--~~~---~v~~~---------~g-----~~i~ 231 (551)
+ +. ..+...+.+.+.+ .|++++.+... .+ +.. .+.+. ++ .++.
T Consensus 111 ~~~~~~~~-----------~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ 179 (284)
T 1rp0_A 111 TYVVVKHA-----------ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVME 179 (284)
T ss_dssp SEEEESCH-----------HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEE
T ss_pred CEEEecCH-----------HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEE
Confidence 0 11 2222333344444 69999988532 22 222 22331 21 5799
Q ss_pred eCeEEEeCCCCCCCC
Q 008850 232 AKDIIIATGSVPFVP 246 (551)
Q Consensus 232 ~d~lVlAtG~~p~~p 246 (551)
+|.||+|+|..+.+.
T Consensus 180 ad~VV~AtG~~s~~~ 194 (284)
T 1rp0_A 180 AKIVVSSCGHDGPFG 194 (284)
T ss_dssp EEEEEECCCSSSTTT
T ss_pred CCEEEECCCCchHHH
Confidence 999999999876644
No 111
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.89 E-value=1.2e-08 Score=106.23 Aligned_cols=137 Identities=22% Similarity=0.377 Sum_probs=78.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcc--------cccCCc-cCChhh---------Hhh-HHHHHH
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGT--------CVNRGC-VPSKAL---------LAV-SGRMRE 159 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~--------~~~~g~-~p~~~~---------~~~-~~~~~~ 159 (551)
+++||+|||||++|+++|+.|++.|++|+|||+ +.+|+. |..... .+...+ ... ...+..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 458999999999999999999999999999999 555543 221111 000000 000 000000
Q ss_pred HHhhhhhhhcCccccccc----cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe---CC--cEEEeCcceE
Q 008850 160 LQSEHHMKALGLQVHAAG----YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL---GP--QKVKFGTDNI 229 (551)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~---~~--~~v~~~~g~~ 229 (551)
.....++..+|++..... +.... ....+...+...+++.||+++.++. ..+ +. ..|.+.++.+
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~~~-------~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~ 177 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPVSN-------KAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEV 177 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEETTC-------CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCE
T ss_pred HHHHHHHHhcCCceEEeeCCEEECCCC-------CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCE
Confidence 111233444454321100 00000 0133444556666778999988753 222 22 3566777777
Q ss_pred EEeCeEEEeCCCCC
Q 008850 230 VTAKDIIIATGSVP 243 (551)
Q Consensus 230 i~~d~lVlAtG~~p 243 (551)
+.+|.||+|||..+
T Consensus 178 i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 178 LETNHVVIAVGGKS 191 (447)
T ss_dssp EECSCEEECCCCSS
T ss_pred EECCEEEECCCCCc
Confidence 99999999999876
No 112
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.87 E-value=1.5e-08 Score=102.41 Aligned_cols=46 Identities=30% Similarity=0.400 Sum_probs=37.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccC--cccccCCcc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVG--GTCVNRGCV 145 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~G--G~~~~~g~~ 145 (551)
.++||+|||||++|+++|..|++.|++|+|||+. .+| .++.+.+++
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~ 51 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVI 51 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCcccc
Confidence 3589999999999999999999999999999995 443 444454444
No 113
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.86 E-value=1.2e-08 Score=103.82 Aligned_cols=132 Identities=19% Similarity=0.176 Sum_probs=74.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCC-hhhHhhHHHHHHHHhh-------hhhhhcCc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPS-KALLAVSGRMRELQSE-------HHMKALGL 171 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~-~~~~~~~~~~~~~~~~-------~~~~~~g~ 171 (551)
.+||+|||||++|+++|..|++.|++|+|||+ ...++........|. ...+...+....+... ..+.. |.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-g~ 89 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH-NK 89 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET-TE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC-Cc
Confidence 47999999999999999999999999999999 444321110000110 0000000000000000 00000 00
Q ss_pred cc------c--ccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe--CCcEEEeCcceEEEeCeEEEeCC
Q 008850 172 QV------H--AAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL--GPQKVKFGTDNIVTAKDIIIATG 240 (551)
Q Consensus 172 ~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~~~~v~~~~g~~i~~d~lVlAtG 240 (551)
.. . ...+++ ..+...+.+.+.+.|++++.++. ..+ +. .|.+.+|.++.+|.||.|+|
T Consensus 90 ~~~~~~~~~~~~~~~~r-----------~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG 157 (379)
T 3alj_A 90 SVSKETFNGLPWRIMTR-----------SHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADG 157 (379)
T ss_dssp EEEEECGGGCCEEEEEH-----------HHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCC
T ss_pred eeeeccCCCCceEEECH-----------HHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCC
Confidence 00 0 001122 33444555566667999998863 222 34 77777888899999999999
Q ss_pred CCCCC
Q 008850 241 SVPFV 245 (551)
Q Consensus 241 ~~p~~ 245 (551)
..+.+
T Consensus 158 ~~s~v 162 (379)
T 3alj_A 158 VGSKV 162 (379)
T ss_dssp TTCHH
T ss_pred ccHHH
Confidence 87653
No 114
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.86 E-value=6.1e-09 Score=110.35 Aligned_cols=142 Identities=16% Similarity=0.181 Sum_probs=79.8
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-Ccc-------CcccccCCccCChhhHh----------------hH
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVV-------GGTCVNRGCVPSKALLA----------------VS 154 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~-------GG~~~~~g~~p~~~~~~----------------~~ 154 (551)
...+||+|||||++|+++|..|++.|++|+|||+ ..+ ++.|....|.|...... ..
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 3458999999999999999999999999999999 443 23333322322100000 00
Q ss_pred H-HHHHHHhhhhhhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe--C-C--cEEEeCcc
Q 008850 155 G-RMRELQSEHHMKALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL--G-P--QKVKFGTD 227 (551)
Q Consensus 155 ~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~-~--~~v~~~~g 227 (551)
. ..........+..+|.+..........+. ......+...+.+.+++.|++++.++. ..+ + . ..|.+.++
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G---~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G 261 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIG---TFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG 261 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCC---HHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccc---cchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC
Confidence 0 00000011223334433211000000000 001134445566667778999998853 222 2 2 24677788
Q ss_pred eEEEeCeEEEeCCCCC
Q 008850 228 NIVTAKDIIIATGSVP 243 (551)
Q Consensus 228 ~~i~~d~lVlAtG~~p 243 (551)
+++.+|.||+|+|..+
T Consensus 262 ~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp CEEECSCEEECCCTTC
T ss_pred CEEECCEEEECCCCCh
Confidence 8899999999999886
No 115
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.81 E-value=1.9e-08 Score=106.10 Aligned_cols=121 Identities=19% Similarity=0.178 Sum_probs=75.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccc-----
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQV----- 173 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~----- 173 (551)
..+||+|||||++|+++|..|++.|++|+|||+ +.+|+ +...++.|. ..+. +..+|+..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-~~~~~~~~~--------~~~~------l~~~g~~~~~~~~ 155 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-HNVLHLWPF--------TIHD------LRALGAKKFYGRF 155 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-CCEEECCHH--------HHHH------HHTTTHHHHCTTT
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-CCcccCChh--------HHHH------HHHcCCccccccc
Confidence 358999999999999999999999999999999 45543 322222221 0111 11111110
Q ss_pred cc---cccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee-------CCcEEEe--C-cc--eEEEeCeEEE
Q 008850 174 HA---AGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL-------GPQKVKF--G-TD--NIVTAKDIII 237 (551)
Q Consensus 174 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~-------~~~~v~~--~-~g--~~i~~d~lVl 237 (551)
.. ..++. ..+...+...+++.|++++.++.. .+ +...|.+ . +| .++.+|.||+
T Consensus 156 ~~~~~~~~~~-----------~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~ 224 (497)
T 2bry_A 156 CTGTLDHISI-----------RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLIS 224 (497)
T ss_dssp TCTTCCEEEH-----------HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEE
T ss_pred cccccccCCH-----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEE
Confidence 00 01111 334445555666689999988643 22 1245665 3 55 5689999999
Q ss_pred eCCCCCCCC
Q 008850 238 ATGSVPFVP 246 (551)
Q Consensus 238 AtG~~p~~p 246 (551)
|+|..+...
T Consensus 225 A~G~~S~~r 233 (497)
T 2bry_A 225 AAGGKFVPE 233 (497)
T ss_dssp CCCTTCCCT
T ss_pred CCCCCcccc
Confidence 999987654
No 116
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.80 E-value=2.1e-08 Score=99.17 Aligned_cols=101 Identities=20% Similarity=0.292 Sum_probs=63.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHc--CCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK--GLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAA 176 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 176 (551)
..+||+|||||++|+++|+.|+++ |++|+|||+ ..+||.+...++.+.+..... ....++..+|+++...
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~-------~~~~~L~~~Gv~~~~~ 150 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRK-------PADVFLDEVGVPYEDE 150 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEET-------TTHHHHHHHTCCCEEC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcch-------HHHHHHHHcCCccccc
Confidence 358999999999999999999997 999999999 667777666666655443321 1123445556554321
Q ss_pred -ccCHHHHHHHHHHHHHHHHHHHHHHHHH-cCeEEEeceE
Q 008850 177 -GYDRQGVADHANNLATKIRNNLTNSMKA-LGVDILTGVG 214 (551)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~ 214 (551)
.+.... + ...+...+...+.. .+++++.+..
T Consensus 151 G~~~~~~---~----~~d~~~~L~~~a~~~~gV~i~~~~~ 183 (344)
T 3jsk_A 151 GDYVVVK---H----AALFTSTVLSKVLQRPNVKLFNATT 183 (344)
T ss_dssp SSEEEES---C----HHHHHHHHHHHHHTCTTEEEEETEE
T ss_pred CCeEEEe---c----HHHHHHHHHHHHHhCCCCEEEeCCE
Confidence 111000 0 11222344445555 5999988763
No 117
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.80 E-value=9.6e-09 Score=106.10 Aligned_cols=35 Identities=34% Similarity=0.471 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDV 134 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~ 134 (551)
..+||+|||||++|+++|..|++.|++|+|||+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34899999999999999999999999999999954
No 118
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.78 E-value=3.2e-08 Score=106.39 Aligned_cols=53 Identities=23% Similarity=0.340 Sum_probs=42.6
Q ss_pred CCCceeeCCCCccccCCCCCCCcEEEecCCCCCC----C----cHHHHHHHHHHHHHHHcC
Q 008850 385 QRGFVPVDERMRVIDANGNLVPHLYCIGDANGKM----M----LAHAASAQGISVVEQVTG 437 (551)
Q Consensus 385 ~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~~----~----~~~~A~~~g~~aa~~i~g 437 (551)
..|.|.||+++|+.+..|+.+||+||+|++++.. . ....++-.|++|+++++.
T Consensus 506 t~GGl~id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~ 566 (571)
T 1y0p_A 506 TMGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAK 566 (571)
T ss_dssp ECCEEEBCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeEECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 6788999999999998999999999999997431 1 233467778999988863
No 119
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.78 E-value=1.4e-08 Score=103.47 Aligned_cols=49 Identities=27% Similarity=0.488 Sum_probs=38.7
Q ss_pred CCCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCc--ccccCCcc
Q 008850 97 PKSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGG--TCVNRGCV 145 (551)
Q Consensus 97 ~~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG--~~~~~g~~ 145 (551)
+...++||+|||||++|+++|..|++.|++|+|||+..+++ ++.+.+++
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~ 63 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGML 63 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCcee
Confidence 34456899999999999999999999999999999965543 33344443
No 120
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.77 E-value=2.8e-08 Score=106.76 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=34.1
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccC
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVG 136 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~G 136 (551)
+..+||+|||||++|+++|..|++.|++|+|||+...+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCC
Confidence 34689999999999999999999999999999995443
No 121
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.72 E-value=1e-08 Score=104.68 Aligned_cols=38 Identities=42% Similarity=0.674 Sum_probs=34.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGG 137 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG 137 (551)
.+|||+||||||||+++|..|++.|++|+|||| +.+|.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 459999999999999999999999999999999 55543
No 122
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.70 E-value=6.2e-08 Score=102.76 Aligned_cols=37 Identities=30% Similarity=0.519 Sum_probs=33.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVG 136 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~G 136 (551)
.++||+|||||++|+++|+.|++.|++|+|||+...+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 4589999999999999999999999999999995533
No 123
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.69 E-value=6.3e-08 Score=98.94 Aligned_cols=37 Identities=43% Similarity=0.731 Sum_probs=33.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGG 137 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG 137 (551)
++||+|||||++|+++|..|++.|++|+|||+. ..|+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 589999999999999999999999999999994 4554
No 124
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.69 E-value=1.9e-07 Score=94.97 Aligned_cols=38 Identities=24% Similarity=0.487 Sum_probs=34.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGG 137 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG 137 (551)
.++||+|||||++|+++|..|++.|++|+|||+..+|+
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~ 41 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGS 41 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 46899999999999999999999999999999965553
No 125
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.67 E-value=3.8e-08 Score=102.23 Aligned_cols=37 Identities=30% Similarity=0.526 Sum_probs=33.4
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCC-cEEEeeCCcc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGDVV 135 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~~~ 135 (551)
...+||||||||++|+++|.+|++.|+ +|+|||+...
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 345899999999999999999999999 9999999544
No 126
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.66 E-value=1.5e-08 Score=97.38 Aligned_cols=40 Identities=25% Similarity=0.408 Sum_probs=37.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
.+||+|||||||||+||..|+++|++|+|||| +.+||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~ 42 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 37999999999999999999999999999999 78999875
No 127
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.65 E-value=1.1e-07 Score=97.53 Aligned_cols=38 Identities=32% Similarity=0.533 Sum_probs=34.2
Q ss_pred CcccEEEECCChHHHHHHHHHHH-cC-CcEEEeeCCccCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVE-KG-LKTAIIEGDVVGG 137 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~-~g-~~V~liE~~~~GG 137 (551)
.++||+|||||++|+++|.+|++ .| ++|+|||+..+|+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~ 59 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAG 59 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCC
Confidence 45899999999999999999999 99 9999999955554
No 128
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.65 E-value=1.6e-07 Score=100.85 Aligned_cols=53 Identities=17% Similarity=0.274 Sum_probs=42.5
Q ss_pred CCCceeeCCCCccccCCCCCCCcEEEecCCCCCC----Cc----HHHHHHHHHHHHHHHcC
Q 008850 385 QRGFVPVDERMRVIDANGNLVPHLYCIGDANGKM----ML----AHAASAQGISVVEQVTG 437 (551)
Q Consensus 385 ~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~~----~~----~~~A~~~g~~aa~~i~g 437 (551)
..|.|.||+++|+.+..++.+||+||+|++++.. .+ ...++-.|++|+++++.
T Consensus 501 t~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~ 561 (566)
T 1qo8_A 501 TMGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAK 561 (566)
T ss_dssp ECCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ecccEEECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Confidence 6788999999999998899999999999997541 12 33466778999988763
No 129
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.65 E-value=2.2e-07 Score=98.42 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=44.0
Q ss_pred cCCCceeeCCCCccccCCCCCCCcEEEecCCCCCCC--------cHHHHHHHHHHHHHHHcC
Q 008850 384 TQRGFVPVDERMRVIDANGNLVPHLYCIGDANGKMM--------LAHAASAQGISVVEQVTG 437 (551)
Q Consensus 384 ~~~G~i~Vd~~~~~~~~~~t~~~~IyA~GD~~~~~~--------~~~~A~~~g~~aa~~i~g 437 (551)
...|.|.+|+++|+.+..|+.+||+||+|.|++... ....++-.|++|+++++.
T Consensus 447 ~t~GGl~~d~~~~Vl~~~g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 447 FTLGGLRTTVNSEVLHVSGEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp EECCEECBCTTCEEEBTTSSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred ccCcCeeECCCCceECCCCCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 367789999999999999999999999999975411 234577889999999875
No 130
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.64 E-value=1.2e-07 Score=102.08 Aligned_cols=48 Identities=25% Similarity=0.502 Sum_probs=39.0
Q ss_pred CCcccEEEECCChHHHHHHHHHHHc------CCcEEEeeC-CccCcccccCCccC
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEK------GLKTAIIEG-DVVGGTCVNRGCVP 146 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~------g~~V~liE~-~~~GG~~~~~g~~p 146 (551)
.+++||+|||||+||+++|+.|++. |++|+|||| ..+|+.+...+++.
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~ 87 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLD 87 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEEC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccC
Confidence 3458999999999999999999999 999999999 56776544333443
No 131
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.63 E-value=5.2e-08 Score=100.18 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=31.7
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
....+||+|||||++|+++|..|++.|++|+|||+.
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 345689999999999999999999999999999993
No 132
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.63 E-value=9.6e-08 Score=104.83 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=33.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVG 136 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~G 136 (551)
..+||+|||||++|+++|..|+++|++|+|||+ ..+|
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g 308 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA 308 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 348999999999999999999999999999999 5565
No 133
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.62 E-value=2.7e-07 Score=101.41 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=33.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVG 136 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~G 136 (551)
..+||||||||++|+++|..|++.|++|+|||+ ..+|
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g 300 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPA 300 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTT
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccc
Confidence 358999999999999999999999999999999 4554
No 134
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.61 E-value=1.1e-07 Score=101.62 Aligned_cols=38 Identities=24% Similarity=0.320 Sum_probs=33.8
Q ss_pred CcccEEEECCChHHHHHHHHHHH---cCCcEEEeeCCccCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVE---KGLKTAIIEGDVVGG 137 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~---~g~~V~liE~~~~GG 137 (551)
..+||+|||||++|+++|..|++ .|++|+|||+..++.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~ 44 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR 44 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC
Confidence 35799999999999999999999 999999999965443
No 135
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.61 E-value=1.6e-07 Score=93.66 Aligned_cols=39 Identities=26% Similarity=0.418 Sum_probs=36.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
+||+|||||++|+++|..|++.|++|+|||+ ..+||.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~ 42 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccce
Confidence 6999999999999999999999999999999 67887665
No 136
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.61 E-value=1.7e-07 Score=95.06 Aligned_cols=36 Identities=22% Similarity=0.470 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVG 136 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~G 136 (551)
.++||+|||||++|+++|.+|+ +|++|+|||+. .+|
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g 44 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPG 44 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTT
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCcc
Confidence 4589999999999999999999 69999999995 565
No 137
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.61 E-value=2.5e-07 Score=94.76 Aligned_cols=33 Identities=27% Similarity=0.492 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 589999999999999999999999999999994
No 138
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.59 E-value=2.3e-07 Score=99.30 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=30.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
+++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~ 81 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKL 81 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCC
Confidence 4589999999999999999999999999999993
No 139
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.59 E-value=2e-07 Score=99.37 Aligned_cols=34 Identities=26% Similarity=0.696 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.++||+|||||++|+++|+.|++.|++|+||||.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~ 37 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERR 37 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4589999999999999999999999999999994
No 140
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.58 E-value=5.2e-07 Score=91.84 Aligned_cols=37 Identities=27% Similarity=0.493 Sum_probs=33.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGG 137 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG 137 (551)
++||+|||||++|+++|.+|+++|++|+|||+...++
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 4899999999999999999999999999999966554
No 141
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.58 E-value=4.9e-07 Score=92.35 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 34 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQ 34 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 479999999999999999999999999999994
No 142
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.58 E-value=2e-07 Score=95.42 Aligned_cols=36 Identities=25% Similarity=0.537 Sum_probs=32.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVG 136 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~G 136 (551)
.+||+|||||++|+++|..|+++|++|+|||+...+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 489999999999999999999999999999995443
No 143
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.58 E-value=3.2e-07 Score=92.88 Aligned_cols=35 Identities=37% Similarity=0.609 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCcc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVV 135 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~ 135 (551)
++||+|||||++|+++|.+|+++|++|+|||+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 47999999999999999999999999999999544
No 144
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.54 E-value=2.9e-07 Score=96.05 Aligned_cols=34 Identities=35% Similarity=0.756 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~ 38 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSK 38 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3589999999999999999999999999999994
No 145
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.54 E-value=7.7e-07 Score=91.82 Aligned_cols=39 Identities=28% Similarity=0.532 Sum_probs=36.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
+||+|||||.+||+||.+|++.|++|+|+|+ +.+||.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 4899999999999999999999999999999 78888765
No 146
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.54 E-value=1.6e-07 Score=99.95 Aligned_cols=54 Identities=19% Similarity=0.226 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHH-cCeEEEeceEEEe--C--Cc--EEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 192 TKIRNNLTNSMKA-LGVDILTGVGTIL--G--PQ--KVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 192 ~~~~~~~~~~~~~-~~v~~~~~~~~~~--~--~~--~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
..+...+...+.+ .|++++.+++..+ + .. .|.+.+|.++.+|.||.|+|....+
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 3455566667777 8999999876543 2 22 4556666679999999999987544
No 147
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.53 E-value=2.4e-07 Score=94.90 Aligned_cols=35 Identities=29% Similarity=0.376 Sum_probs=32.4
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
+..+||+|||||++|+++|..|++.|++|+|||+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 44689999999999999999999999999999983
No 148
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.52 E-value=1.9e-07 Score=98.51 Aligned_cols=35 Identities=26% Similarity=0.353 Sum_probs=32.8
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
+.+++||+||||||+|+++|..|++.|++|+||||
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~ 42 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLER 42 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 44568999999999999999999999999999998
No 149
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.52 E-value=5.6e-07 Score=92.11 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+||+|||||++|+++|..|++.|++|+|||+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence 3479999999999999999999999999999993
No 150
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.51 E-value=1.7e-06 Score=89.21 Aligned_cols=39 Identities=28% Similarity=0.574 Sum_probs=36.6
Q ss_pred cEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCccccc
Q 008850 103 DLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVN 141 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~ 141 (551)
||+|||||++||++|.+|++.|++|+|+|+ +.+||.+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 899999999999999999999999999999 788988764
No 151
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.51 E-value=2.5e-07 Score=92.68 Aligned_cols=39 Identities=28% Similarity=0.357 Sum_probs=36.0
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCcEEEeeC-CccCcccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVE---KGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~---~g~~V~liE~-~~~GG~~~ 140 (551)
+||+|||||++|+++|..|++ .|++|+|||| ..+||.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~ 44 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMT 44 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcccee
Confidence 599999999999999999999 8999999999 67888765
No 152
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.51 E-value=7.3e-07 Score=87.62 Aligned_cols=40 Identities=40% Similarity=0.518 Sum_probs=35.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHc--CCcEEEeeC-CccCccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK--GLKTAIIEG-DVVGGTC 139 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~-~~~GG~~ 139 (551)
..+||+|||||++|+++|..|++. |++|+|+|+ +..||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 357999999999999999999998 999999999 6666443
No 153
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.50 E-value=4.7e-07 Score=92.95 Aligned_cols=37 Identities=24% Similarity=0.378 Sum_probs=33.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHc--CCcEEEeeCCccC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK--GLKTAIIEGDVVG 136 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~~~~G 136 (551)
..+||+|||||++|+++|..|++. |++|+|||+...+
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 358999999999999999999999 9999999995443
No 154
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.48 E-value=8.8e-07 Score=93.39 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=31.7
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
..++||+||||||+|+++|..|++.|++|+|||+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~ 43 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQ 43 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 3468999999999999999999999999999998
No 155
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.48 E-value=7.9e-07 Score=91.37 Aligned_cols=34 Identities=32% Similarity=0.606 Sum_probs=31.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCc-EEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLK-TAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~-V~liE~~ 133 (551)
..+||+|||||++|+++|..|++.|++ |+|||+.
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~ 37 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESS 37 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 358999999999999999999999999 9999993
No 156
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.45 E-value=7.2e-07 Score=95.74 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=42.8
Q ss_pred CCCceeeCCCCccccCCC-CCCCcEEEecCCCCCC----C----cHHHHHHHHHHHHHHHcC
Q 008850 385 QRGFVPVDERMRVIDANG-NLVPHLYCIGDANGKM----M----LAHAASAQGISVVEQVTG 437 (551)
Q Consensus 385 ~~G~i~Vd~~~~~~~~~~-t~~~~IyA~GD~~~~~----~----~~~~A~~~g~~aa~~i~g 437 (551)
..|.|.||++.|+.+..+ +.+||+||+|++++.. . ....++-.|++|+++++.
T Consensus 506 t~GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~ 567 (572)
T 1d4d_A 506 TMGGLVIDTKAEVKSEKTAKPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAK 567 (572)
T ss_dssp ECCEEEBCTTCEEEBSSSSSEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCeEECCCCeEEcCCCCcccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 678899999999998888 8999999999997431 1 234567789999998874
No 157
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.45 E-value=1.1e-06 Score=94.01 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHHH---cCCcEEEeeCCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVE---KGLKTAIIEGDV 134 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~---~g~~V~liE~~~ 134 (551)
..+||||||||++|+++|..|++ .|++|+|||+..
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 35899999999999999999999 899999999954
No 158
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.43 E-value=3.3e-08 Score=104.32 Aligned_cols=141 Identities=17% Similarity=0.108 Sum_probs=93.9
Q ss_pred EeCeEEEeCCCCCCCCCCccCCCceeecc---hhhhcc--------------ccCCceEEEECCChhHHHHHHHHHhCCC
Q 008850 231 TAKDIIIATGSVPFVPKGIEVDGKTVITS---DHALKL--------------EFVPDWIAIVGSGYIGLEFSDVYTALGS 293 (551)
Q Consensus 231 ~~d~lVlAtG~~p~~p~~~~~~~~~v~~~---~~~~~~--------------~~~~k~v~VvG~G~~g~e~A~~l~~~g~ 293 (551)
.||++++++|++|..+++...+...+++. .+...+ .....+|+|||+|++|+.+|..|++.|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 46789999999987665332221222211 111111 1235789999999999999999999999
Q ss_pred eEEEEcccCcCCCC----CC-----------------------------HHHHHHHHHHHhCCCceEEEeceEEE--eC-
Q 008850 294 EVTFIEALDQLMPG----FD-----------------------------PEIGKLAQRVLINPRKIDYHTGVFAT--KD- 337 (551)
Q Consensus 294 ~Vtlv~~~~~~l~~----~~-----------------------------~~~~~~~~~~l~~~~gi~~~~~~~~~--~~- 337 (551)
+|+++++.+.+... +. .++.+.+.+.+++ .||+++.++.+. ..
T Consensus 117 ~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~ 195 (497)
T 2bry_A 117 RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALL-LGVEIHWGVKFTGLQPP 195 (497)
T ss_dssp EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHH-TTCEEEESCEEEEEECC
T ss_pred eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEe
Confidence 99999988654211 01 3455566677765 799999998877 21
Q ss_pred ---CCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 338 ---GKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 338 ---~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
++.+.+++.+.. +++..++.+|.||+|+|..+...
T Consensus 196 ~~~~~~~~v~~~~~~-~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 196 PRKGSGWRAQLQPNP-PAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CSTTCCBEEEEESCC-CHHHHTCCBSEEEECCCTTCCCT
T ss_pred cCCCCEEEEEEEECC-CCCEEEEEcCEEEECCCCCcccc
Confidence 345667663210 01113689999999999988765
No 159
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.43 E-value=1.6e-06 Score=97.36 Aligned_cols=44 Identities=27% Similarity=0.462 Sum_probs=37.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-cEEEeeCCcc----CcccccCCc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGDVV----GGTCVNRGC 144 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~~~----GG~~~~~g~ 144 (551)
++||+|||||++|+++|.+|+++|+ +|+|||+... |++|.+.++
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~ 52 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGL 52 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCce
Confidence 4799999999999999999999998 9999999543 455555554
No 160
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.41 E-value=9.6e-07 Score=91.87 Aligned_cols=45 Identities=20% Similarity=0.280 Sum_probs=37.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CcEEEeeC-CccC--cccccCCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKG-LKTAIIEG-DVVG--GTCVNRGC 144 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g-~~V~liE~-~~~G--G~~~~~g~ 144 (551)
.++||+|||||++|+++|..|+++| ++|+|||+ ..++ .++.+.++
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~S~~~~g~ 70 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAA 70 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSGGGSSCCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCcccCCCcE
Confidence 4589999999999999999999999 99999999 6654 34444444
No 161
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.39 E-value=1.2e-06 Score=87.27 Aligned_cols=47 Identities=21% Similarity=0.265 Sum_probs=39.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCc-------cCcccccCCccCCh
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDV-------VGGTCVNRGCVPSK 148 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~-------~GG~~~~~g~~p~~ 148 (551)
+||+|||||+||+.||..|++.|++|+|||+.. ..+.+.+..|.|+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSi 55 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSL 55 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEE
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCC
Confidence 699999999999999999999999999999832 34556666777764
No 162
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.39 E-value=9e-07 Score=93.77 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHH---cCCcEEEeeCCcc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVE---KGLKTAIIEGDVV 135 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~---~g~~V~liE~~~~ 135 (551)
.+||||||||++|+++|..|++ .|++|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3699999999999999999999 9999999999543
No 163
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.37 E-value=1e-06 Score=95.67 Aligned_cols=35 Identities=31% Similarity=0.426 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDV 134 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~ 134 (551)
..+||||||||.||++||+.|++.|++|+||||..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 45899999999999999999999999999999943
No 164
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.35 E-value=1.1e-06 Score=94.80 Aligned_cols=34 Identities=32% Similarity=0.535 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+||||||||+||++||+.|++.|++|+||||.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~ 50 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKL 50 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 4589999999999999999999999999999994
No 165
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=2.3e-06 Score=86.50 Aligned_cols=91 Identities=25% Similarity=0.292 Sum_probs=70.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||||+.|+.+|..|++.|.+|+++|+. .+.. ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------------------------~~- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG----------------------------------------LD- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT----------------------------------------CC-
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc----------------------------------------CC-
Confidence 58999999999999999999999999999983 2111 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeCCcEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILGPQKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+.+.+++.||+++.+. +..++...+.+.+|+ +.+|.||+|+|..|..
T Consensus 183 -----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 183 -----------EELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp -----------HHHHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEECC
T ss_pred -----------HHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcCH
Confidence 2233344556677899999884 445555678888887 9999999999988874
No 166
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.32 E-value=2.4e-06 Score=91.82 Aligned_cols=34 Identities=32% Similarity=0.532 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+||||||||+||++||+.|++.|++|+||||.
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~ 39 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKV 39 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence 3589999999999999999999999999999994
No 167
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.31 E-value=2e-06 Score=92.00 Aligned_cols=40 Identities=38% Similarity=0.674 Sum_probs=34.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCc-cCccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDV-VGGTC 139 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~-~GG~~ 139 (551)
..+||+|||||++|+++|..|+++|++|+|||+.. .+|+.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 45999999999999999999999999999999954 34443
No 168
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.29 E-value=3.9e-06 Score=87.48 Aligned_cols=94 Identities=23% Similarity=0.385 Sum_probs=67.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+. .+. |. .+
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l---------~~------------------------------~~- 207 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL---------PT------------------------------MD- 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC---------TT------------------------------SC-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc---------cc------------------------------cC-
Confidence 58999999999999999999999999999983 211 10 01
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CC--cEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GP--QKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~--~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
..+...+.+.+++.||+++.+. +..+ +. ..+.+.++.++.+|.||+|+|.+|..+
T Consensus 208 -----------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 208 -----------LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp -----------HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred -----------HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 1223334455666799999874 3322 22 234555678899999999999988754
No 169
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.29 E-value=3.6e-06 Score=86.33 Aligned_cols=94 Identities=19% Similarity=0.193 Sum_probs=69.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++|+ +.+.... ++
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------~~- 186 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA--------------------------------------AP- 186 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------------------------------------SC-
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc--------------------------------------cC-
Confidence 5899999999999999999999999999998 3221100 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeCCcEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILGPQKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+...+++.||+++.+. +..+....|.+.+|+++.+|.||+|+|..|..
T Consensus 187 -----------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 187 -----------ATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSCEEECC
T ss_pred -----------HHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcCCCccH
Confidence 2233344556677899999884 33332337778888899999999999988764
No 170
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.26 E-value=5.4e-07 Score=95.39 Aligned_cols=41 Identities=32% Similarity=0.513 Sum_probs=37.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CCcEEEeeC-CccCcccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK-GLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~-g~~V~liE~-~~~GG~~~ 140 (551)
+++||||||||++||+||..|++. |++|+|+|+ +.+||.|.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 358999999999999999999885 999999999 89999775
No 171
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.25 E-value=8.7e-06 Score=85.89 Aligned_cols=36 Identities=36% Similarity=0.664 Sum_probs=33.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVG 136 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~G 136 (551)
.+||+|||||++|+++|..|+++|++|+|||+..++
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~ 38 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLA 38 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 489999999999999999999999999999995443
No 172
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.25 E-value=5.6e-06 Score=89.98 Aligned_cols=34 Identities=26% Similarity=0.469 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHHH-cCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVE-KGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~-~g~~V~liE~~ 133 (551)
..+||+||||||+|+++|..|++ .|++|+||||.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~ 65 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQK 65 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 46899999999999999999999 99999999993
No 173
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.23 E-value=6.5e-06 Score=87.88 Aligned_cols=37 Identities=24% Similarity=0.440 Sum_probs=33.3
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-Ccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVV 135 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~ 135 (551)
+.++||+||||||+|+++|..|++.|++|+|||| ...
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3458999999999999999999999999999999 443
No 174
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.20 E-value=3.3e-06 Score=87.43 Aligned_cols=93 Identities=15% Similarity=0.271 Sum_probs=71.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||||+.|+.+|..+++.|.+|+|+|+ +.+... .+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~---------------------------------------~d- 187 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL---------------------------------------MD- 187 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT---------------------------------------SC-
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc---------------------------------------cc-
Confidence 4899999999999999999999999999998 332110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEeCCcEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TILGPQKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+...+++.||+++.+.. ...+...+.+.+++++.+|.||+|+|..|+.
T Consensus 188 -----------~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~ 242 (437)
T 4eqs_A 188 -----------ADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNS 242 (437)
T ss_dssp -----------GGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEESC
T ss_pred -----------chhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceecCc
Confidence 11222334556778999998863 4556678888899999999999999988864
No 175
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=4.5e-06 Score=87.05 Aligned_cols=94 Identities=20% Similarity=0.346 Sum_probs=66.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+ +.+... ++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------~~- 211 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT---------------------------------------YD- 211 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---------------------------------------SC-
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc---------------------------------------cC-
Confidence 5899999999999999999999999999998 332110 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEeCCcEEEe--Ccc--eEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TILGPQKVKF--GTD--NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~v~~--~~g--~~i~~d~lVlAtG~~p~~p 246 (551)
..+...+.+.+++.||+++.+.. ..++...+.+ .+| .++.+|.||+|+|.+|+.+
T Consensus 212 -----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 212 -----------SELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp -----------HHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred -----------HHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 12223344456677999998853 3332222333 245 6899999999999998765
No 176
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.19 E-value=6.1e-06 Score=85.83 Aligned_cols=94 Identities=21% Similarity=0.185 Sum_probs=68.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+. .+.. .++
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------------~~~- 207 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP---------------------------------------SFD- 207 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------------TSC-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh---------------------------------------hhh-
Confidence 58999999999999999999999999999983 2110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--C-C--cEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--G-P--QKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~-~--~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
..+...+.+.+++.||+++.+. +..+ + . ..+.+.+|+++.+|.||+|+|.+|...
T Consensus 208 -----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 208 -----------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp -----------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 1223334455667799999885 3322 1 1 367777888899999999999988764
No 177
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.19 E-value=6.5e-06 Score=83.69 Aligned_cols=95 Identities=16% Similarity=0.241 Sum_probs=68.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
..+++|||+|+.|+.+|..|++.|.+|+++|+ +.+.... .+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~--------------------------------------~~ 186 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL--------------------------------------LH 186 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------------------------------------SC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc--------------------------------------cC
Confidence 36899999999999999999999999999998 3221100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--C--CcEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--G--PQKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~--~~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
..+...+.+.+++.||+++.+. +..+ + ...+.+.+++++.+|.||+|+|..|..
T Consensus 187 ------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 187 ------------PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp ------------HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 2233344556667899999875 3322 1 135667778889999999999988764
No 178
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.18 E-value=5.2e-06 Score=86.69 Aligned_cols=94 Identities=18% Similarity=0.214 Sum_probs=67.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|||+. .+... .+
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------~~- 209 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ---------------------------------------GD- 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------------------------------------SC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc---------------------------------------cC-
Confidence 58999999999999999999999999999983 21110 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--CC--cEEEeC-c--ce--EEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--GP--QKVKFG-T--DN--IVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~--~~v~~~-~--g~--~i~~d~lVlAtG~~p~~p 246 (551)
.++...+.+.+++.||+++.+... .+ +. ..+.+. + |+ ++.+|.||+|+|..|...
T Consensus 210 -----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 210 -----------PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred -----------HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 223334455667789999988532 22 12 234443 4 55 899999999999988765
No 179
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.17 E-value=8.4e-06 Score=84.70 Aligned_cols=95 Identities=27% Similarity=0.273 Sum_probs=67.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
..+++|||||+.|+.+|..|++.|.+|+|+|+. .+... .++
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------------~~~ 190 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV--------------------------------------YLD 190 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------------TCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc--------------------------------------cCC
Confidence 469999999999999999999999999999983 22110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC--C--cEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG--P--QKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~--~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+. +..+. . ..+.+ ++.++.+|.||+|+|.+|+.+
T Consensus 191 ------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 191 ------------KEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp ------------HHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCG
T ss_pred ------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChH
Confidence 2233344556677899999875 33322 1 13455 456899999999999888754
No 180
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.16 E-value=4.9e-06 Score=82.42 Aligned_cols=96 Identities=21% Similarity=0.172 Sum_probs=74.2
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC---------------CCC----CHHHHHHHHHHHhCCCceEEEe
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM---------------PGF----DPEIGKLAQRVLINPRKIDYHT 330 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------------~~~----~~~~~~~~~~~l~~~~gi~~~~ 330 (551)
++|+|||+|+.|+..|..|++.|.+|+++++.+.+. +.+ ..++...+.+.+++ .+++++.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 86 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAK-FDQTICL 86 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTT-SCCEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHH-hCCcEEc
Confidence 589999999999999999999999999999876421 111 25566777777776 7999998
Q ss_pred ceEEE---eCCC-cEEEEEecccCCCCCeEEecCEEEEeecC---CCCCC
Q 008850 331 GVFAT---KDGK-PVTIELIDAKTKEPKDTLEVDAALIATGR---APFTN 373 (551)
Q Consensus 331 ~~~~~---~~~~-~~~v~~~~g~~~~~~~~i~~D~vi~a~G~---~p~~~ 373 (551)
+..+. .+++ ...+++.++ ++.+|.|++|+|. .|...
T Consensus 87 ~~~v~~i~~~~~~~~~v~~~~g-------~~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVTNEE-------THYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp SCCEEEEEECTTSCEEEEESSE-------EEEEEEEEECCTTSCCEECCC
T ss_pred cCEEEEEEECCCCcEEEEECCC-------EEEeCEEEECCCCCcCCCCCC
Confidence 87766 3333 566776554 4899999999999 77654
No 181
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.16 E-value=8.1e-06 Score=83.63 Aligned_cols=94 Identities=23% Similarity=0.356 Sum_probs=69.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||+|+.|+.+|..+++.|.+|+++++ +.+.... .+
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~--------------------------------------~~- 183 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV--------------------------------------VT- 183 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------------------------------------SC-
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc--------------------------------------cC-
Confidence 5899999999999999999999999999998 3211100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC---C--cEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG---P--QKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~---~--~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
..+...+...+++.||+++.+. +..+. . ..|.+.+|+++.+|.||+|+|..|..
T Consensus 184 -----------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 184 -----------PEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred -----------HHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCH
Confidence 2233445556677899999884 33221 1 24677888899999999999998764
No 182
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.15 E-value=1.6e-05 Score=77.27 Aligned_cols=98 Identities=16% Similarity=0.139 Sum_probs=71.9
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC---------CCCC----CHHHHHHHHHHHhCCCceEEEeceEEE-
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL---------MPGF----DPEIGKLAQRVLINPRKIDYHTGVFAT- 335 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~---------l~~~----~~~~~~~~~~~l~~~~gi~~~~~~~~~- 335 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ++.. ..++.+.+.+.+.+..+++++.+....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 82 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDA 82 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEE
Confidence 57999999999999999999999999999964311 1111 135666777777663389887764333
Q ss_pred -eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 -KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 -~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.+++...+++.++ +++.+|.|++|+|..|+..
T Consensus 83 ~~~~~~~~v~~~~g------~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 83 KGSFGEFIVEIDGG------RRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEETTEEEEEETTS------CEEEEEEEEECCCCEEECC
T ss_pred EEcCCeEEEEECCC------CEEEcCEEEECCCCCCCCC
Confidence 3444566776554 5799999999999988654
No 183
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.15 E-value=8.4e-06 Score=85.09 Aligned_cols=94 Identities=19% Similarity=0.184 Sum_probs=68.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+. .+.. .++
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~---------------------------------------~~~- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF---------------------------------------QFD- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------------TSC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc---------------------------------------ccC-
Confidence 48999999999999999999999999999983 2110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC----CcEEEeCcce-EEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG----PQKVKFGTDN-IVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~----~~~v~~~~g~-~i~~d~lVlAtG~~p~~p 246 (551)
..+...+.+.+++.||+++.+. +..+. ...+.+.+|+ ++.+|.||+|+|..|+..
T Consensus 207 -----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 207 -----------PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 1222334455677899999885 33221 1356677787 899999999999988764
No 184
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.15 E-value=6.5e-06 Score=81.09 Aligned_cols=96 Identities=13% Similarity=0.101 Sum_probs=71.5
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEccc--CcC--------CCCC----CHHHHHHHHHHHhCCCceEEEeceEEE
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL--DQL--------MPGF----DPEIGKLAQRVLINPRKIDYHTGVFAT 335 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~--~~~--------l~~~----~~~~~~~~~~~l~~~~gi~~~~~~~~~ 335 (551)
.+|+|||+|+.|+..|..|++.|.+|+++++. ..+ .+.+ ..++.+.+.+.+++ .+++++. ..+.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~-~~v~ 93 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEK-YEVPVLL-DIVE 93 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHT-TTCCEEE-SCEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHH-cCCEEEE-EEEE
Confidence 58999999999999999999999999999985 111 1222 24566777777776 7899888 4444
Q ss_pred ---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 ---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 ---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.+++...+++.++ .++.+|.+++|+|..|...
T Consensus 94 ~i~~~~~~~~v~~~~g------~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 94 KIENRGDEFVVKTKRK------GEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEEC--CEEEEESSS------CEEEEEEEEECCCCEECCC
T ss_pred EEEecCCEEEEEECCC------CEEEcCEEEECcCCCCccC
Confidence 3445566666554 5899999999999987654
No 185
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.15 E-value=7.2e-06 Score=84.19 Aligned_cols=94 Identities=24% Similarity=0.329 Sum_probs=69.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++. .+.... +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~--------------------------------------~-- 183 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV--------------------------------------L-- 183 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH--------------------------------------H--
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh--------------------------------------c--
Confidence 58999999999999999999999999999983 211000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEeCC----cEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TILGP----QKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~----~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
...+...+.+.+++.||+++.+.. ..+.. ..|.+.+|+++.+|.||+|+|..|..
T Consensus 184 ----------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 184 ----------GRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp ----------CHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECC
T ss_pred ----------CHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecH
Confidence 023334455566778999997753 32221 25788888899999999999998864
No 186
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.14 E-value=8.4e-06 Score=85.47 Aligned_cols=94 Identities=19% Similarity=0.315 Sum_probs=67.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|||+ +.+... ++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------~~- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS---------------------------------------MD- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS---------------------------------------SC-
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc---------------------------------------cC-
Confidence 5899999999999999999999999999998 332210 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe----CCc--EEEeC-----cceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL----GPQ--KVKFG-----TDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~----~~~--~v~~~-----~g~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+.+.+++.||+++.++. ..+ +.. .+.+. ++.++.+|.||+|+|.+|...
T Consensus 224 -----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 224 -----------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 22333445566778999998853 222 222 34443 456899999999999988754
No 187
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.13 E-value=2e-06 Score=89.65 Aligned_cols=43 Identities=28% Similarity=0.408 Sum_probs=39.2
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVN 141 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~ 141 (551)
...+||||||||++||+||..|++.|++|+|+|+ +.+||.+..
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 3458999999999999999999999999999999 789998764
No 188
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.13 E-value=1.8e-06 Score=88.28 Aligned_cols=43 Identities=21% Similarity=0.436 Sum_probs=39.3
Q ss_pred CCcccEEEECCChHHHHHHHHHHHc-CCcEEEeeC-CccCccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEK-GLKTAIIEG-DVVGGTCVN 141 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~-g~~V~liE~-~~~GG~~~~ 141 (551)
..++||+|||||++|+++|..|++. |++|+|+|+ +.+||.|..
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 3468999999999999999999999 999999999 789999864
No 189
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=1.2e-05 Score=83.72 Aligned_cols=94 Identities=19% Similarity=0.332 Sum_probs=66.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+ +.+. |. ++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~~------------------------------~~- 210 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL---------SG------------------------------FE- 210 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------TT------------------------------SC-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc---------cc------------------------------cC-
Confidence 5899999999999999999999999999998 3221 10 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--CC--cEEEeC---cceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--GP--QKVKFG---TDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~--~~v~~~---~g~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+... .+ +. ..+.+. ++.++.+|.||+|+|.+|...
T Consensus 211 -----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 211 -----------KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 123334445667789999987532 22 12 233332 456899999999999988653
No 190
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.13 E-value=9e-06 Score=81.27 Aligned_cols=91 Identities=15% Similarity=0.151 Sum_probs=69.5
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC---------------------CCCC-----------HHHHHHHH
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM---------------------PGFD-----------PEIGKLAQ 317 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------------------~~~~-----------~~~~~~~~ 317 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+. .++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 479999999999999999999999999999876431 1110 56777787
Q ss_pred HHHhCCCceEEEeceEEE---eCCCcEE-EEEecccCCCCCeEEecCEEEEeecC
Q 008850 318 RVLINPRKIDYHTGVFAT---KDGKPVT-IELIDAKTKEPKDTLEVDAALIATGR 368 (551)
Q Consensus 318 ~~l~~~~gi~~~~~~~~~---~~~~~~~-v~~~~g~~~~~~~~i~~D~vi~a~G~ 368 (551)
+.+++ .+++++.+..+. .+++.+. +++.+ .++.+|.||+|+|.
T Consensus 84 ~~~~~-~~~~~~~~~~v~~i~~~~~~~~~v~~~~-------g~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQK-YALPVLRPIRVQRVSHFGERLRVVARDG-------RQWLARAVISATGT 130 (357)
T ss_dssp HHHHH-TTCCEECSCCEEEEEEETTEEEEEETTS-------CEEEEEEEEECCCS
T ss_pred HHHHH-cCCEEEcCCEEEEEEECCCcEEEEEeCC-------CEEEeCEEEECCCC
Confidence 77776 899999987766 3444444 54322 27999999999995
No 191
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.12 E-value=1.2e-05 Score=87.27 Aligned_cols=36 Identities=42% Similarity=0.733 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHH---H-cCCcEEEeeCCcc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAV---E-KGLKTAIIEGDVV 135 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~---~-~g~~V~liE~~~~ 135 (551)
..+||||||||+|||+||+.|+ + .|.+|+||||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4589999999999999999999 6 8999999999544
No 192
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.12 E-value=1.2e-06 Score=92.62 Aligned_cols=39 Identities=31% Similarity=0.520 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
.+|||||||++||+||..|++.|++|+|+|+ +.+||.+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------C
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEE
Confidence 5899999999999999999999999999999 88998664
No 193
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.12 E-value=1.4e-05 Score=82.05 Aligned_cols=95 Identities=23% Similarity=0.365 Sum_probs=69.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++ +.+.... .+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~--------------------------------------~~ 193 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV--------------------------------------AG 193 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--------------------------------------SC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh--------------------------------------cC
Confidence 35899999999999999999999999999998 3211100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe--C-Cc--EEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL--G-PQ--KVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~-~~--~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
..+...+...+++.||+++.+.. ..+ + .. .|.+.+|+++.+|.||+|+|..|..
T Consensus 194 ------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 194 ------------EALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp ------------HHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred ------------HHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 23334445566778999998753 222 2 22 5777888899999999999998875
No 194
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.11 E-value=3.1e-06 Score=87.67 Aligned_cols=97 Identities=25% Similarity=0.308 Sum_probs=69.9
Q ss_pred ceEEEECCChhHHHHHHHHHh---CCCeEEEEcccCcCC--CC--------CC-HHHHHHHHHHHhCCCceEEEeceEEE
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA---LGSEVTFIEALDQLM--PG--------FD-PEIGKLAQRVLINPRKIDYHTGVFAT 335 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~~~l--~~--------~~-~~~~~~~~~~l~~~~gi~~~~~~~~~ 335 (551)
++|+|||+|+.|+..|..|++ .|.+|+++++.+.+. +. .+ .++...+.+.+++ .||+++.+....
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~gv~~~~~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVER-KGIHFIAQSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHT-TTCEEECSCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHH-CCCEEEEeEEEE
Confidence 689999999999999999999 799999999987541 11 11 1222234556665 899998764333
Q ss_pred eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 ~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.+.+...|++.++ +++.+|.+++|+|.+|+..
T Consensus 84 id~~~~~V~~~~g------~~i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 84 IDAEAQNITLADG------NTVHYDYLMIATGPKLAFE 115 (437)
T ss_dssp EETTTTEEEETTS------CEEECSEEEECCCCEECGG
T ss_pred EEcCCCEEEECCC------CEEECCEEEECCCCCcCcc
Confidence 2222225666654 5799999999999988764
No 195
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.10 E-value=2.4e-06 Score=88.10 Aligned_cols=42 Identities=38% Similarity=0.584 Sum_probs=38.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CcEEEeeC-CccCccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKG-LKTAIIEG-DVVGGTCVN 141 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g-~~V~liE~-~~~GG~~~~ 141 (551)
..+||+|||||++||+||..|++.| ++|+|+|+ +.+||.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 3479999999999999999999999 99999999 889998753
No 196
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.09 E-value=2.6e-06 Score=86.46 Aligned_cols=42 Identities=29% Similarity=0.517 Sum_probs=38.9
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
...+||+|||||++|+++|..|++.|++|+|+|+ +.+||.|.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 3468999999999999999999999999999999 78999886
No 197
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.09 E-value=1.1e-05 Score=85.42 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=69.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCHH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQ 181 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 181 (551)
.+++|||||+.|+..|..++++|.+|+|++++.+ +| .+|
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~---------L~------------------------------~~D-- 262 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV---------LR------------------------------GFD-- 262 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS---------ST------------------------------TSC--
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc---------cc------------------------------ccc--
Confidence 4799999999999999999999999999987421 11 012
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-E---eC-CcEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 182 GVADHANNLATKIRNNLTNSMKALGVDILTGVGT-I---LG-PQKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~---~~-~~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
+++...+...+++.||+++.+... . .+ ...+.+.++.++.+|.|++|+|-+|+..
T Consensus 263 ----------~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 263 ----------QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred ----------hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 234445566777889999988532 1 12 2345566777899999999999888764
No 198
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.09 E-value=1.1e-05 Score=80.12 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=74.4
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccC----cC------------CCCC-----CHHHHHHHHHHHhCCCceE
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD----QL------------MPGF-----DPEIGKLAQRVLINPRKID 327 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~----~~------------l~~~-----~~~~~~~~~~~l~~~~gi~ 327 (551)
.++|+|||+|+.|+..|..|++.|.+|+++++.+ .+ .+.+ ..++.+.+.+.+++ .+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~ 100 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTK-FGTE 100 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHH-TTCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHH-cCCE
Confidence 4789999999999999999999999999999843 11 1222 24667777787776 7999
Q ss_pred EEeceEEE--eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 328 YHTGVFAT--KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 328 ~~~~~~~~--~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
++.+.... .+++.+.+++... ++...+.+|.+++|+|..|...
T Consensus 101 i~~~~v~~i~~~~~~~~v~~~~~---~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 101 IITETVSKVDLSSKPFKLWTEFN---EDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp EECSCEEEEECSSSSEEEEETTC---SSSCCEEEEEEEECCCEEECCC
T ss_pred EEEeEEEEEEEcCCEEEEEEEec---CCCcEEEeCEEEECcCCCcCCC
Confidence 99988322 3445555655321 1225789999999999988754
No 199
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.07 E-value=1.5e-05 Score=82.38 Aligned_cols=94 Identities=20% Similarity=0.258 Sum_probs=67.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++|+ +.+.... ++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~--------------------------------------~~- 190 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV--------------------------------------TA- 190 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------------------------------------SC-
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch--------------------------------------hh-
Confidence 5899999999999999999999999999998 3211100 01
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe----C-Cc--EEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL----G-PQ--KVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~----~-~~--~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+...+++.||+++.+. +..+ + .. .+.+.+|+++.+|.||+|+|..|..
T Consensus 191 -----------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 191 -----------PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp -----------HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred -----------HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCc
Confidence 1222334455667899999884 3322 1 22 4677788889999999999988764
No 200
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.07 E-value=1.4e-05 Score=83.74 Aligned_cols=93 Identities=18% Similarity=0.233 Sum_probs=68.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||||+.|+.+|..|++.|.+|+++|+. .+.. .++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------------~~d- 225 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR---------------------------------------KFD- 225 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------------TSC-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc---------------------------------------ccC-
Confidence 58999999999999999999999999999983 2110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--C--C--cEEEeCcc-eEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--G--P--QKVKFGTD-NIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~--~--~~v~~~~g-~~i~~d~lVlAtG~~p~~ 245 (551)
..+...+.+.+++.||+++.+. +..+ + . ..+.+.+| .++.+|.||+|+|.+|..
T Consensus 226 -----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 226 -----------ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp -----------HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred -----------HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 1233344455667899999885 3222 1 1 35677777 789999999999988875
No 201
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.06 E-value=2.5e-06 Score=90.52 Aligned_cols=40 Identities=33% Similarity=0.652 Sum_probs=37.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
.+||+|||||++||+||..|++.|++|+|+|+ +.+||.+.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcee
Confidence 47999999999999999999999999999999 78999875
No 202
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.06 E-value=2e-05 Score=78.26 Aligned_cols=93 Identities=22% Similarity=0.255 Sum_probs=69.1
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC---------------CCC----CHHHHHHHHHHHhCCCceEEEe
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM---------------PGF----DPEIGKLAQRVLINPRKIDYHT 330 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------------~~~----~~~~~~~~~~~l~~~~gi~~~~ 330 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.+.+.+.+++ .+++++.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~ 84 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAP-FNPVYSL 84 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGG-GCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHH-cCCEEEe
Confidence 579999999999999999999999999999876431 111 14556666666665 7899888
Q ss_pred ceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCC
Q 008850 331 GVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRA 369 (551)
Q Consensus 331 ~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~ 369 (551)
+..+. .+++...+++.++ .++.+|.||+|+|..
T Consensus 85 ~~~v~~i~~~~~~~~v~~~~g------~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 85 GERAETLEREGDLFKVTTSQG------NAYTAKAVIIAAGVG 120 (335)
T ss_dssp SCCEEEEEEETTEEEEEETTS------CEEEEEEEEECCTTS
T ss_pred CCEEEEEEECCCEEEEEECCC------CEEEeCEEEECCCCC
Confidence 87665 2333455655443 579999999999984
No 203
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=2.2e-05 Score=82.81 Aligned_cols=94 Identities=18% Similarity=0.198 Sum_probs=69.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++|+ +.+.. .++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------------~~d- 216 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR---------------------------------------KFD- 216 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT---------------------------------------TSC-
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc---------------------------------------ccc-
Confidence 5899999999999999999999999999998 32110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--C-C--cEEEeCcceE-EEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--G-P--QKVKFGTDNI-VTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~-~--~~v~~~~g~~-i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+. +..+ + . ..+.+.+|++ +.+|.||+|+|..|...
T Consensus 217 -----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 217 -----------ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred -----------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 2233344556777899999885 3222 1 1 3566777777 99999999999998763
No 204
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.05 E-value=1.9e-05 Score=83.07 Aligned_cols=94 Identities=19% Similarity=0.271 Sum_probs=69.3
Q ss_pred ccEEEECCChHHHHHHHHHHHc---CCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK---GLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~---g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
.+++|||||+.|+.+|..|++. |.+|++||+. .+. | .
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l---------~------------------------------~ 228 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL---------R------------------------------G 228 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS---------T------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc---------c------------------------------c
Confidence 5899999999999999999999 9999999983 211 0 0
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe--C---CcEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL--G---PQKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~---~~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
++ .++...+...+++.||+++.+.. ..+ + ...+.+.+|+++.+|.||+|+|.+|...
T Consensus 229 ~d------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 229 FD------------SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp SC------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred cC------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 11 22333445566778999998853 222 2 1356777777899999999999988754
No 205
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.04 E-value=2.4e-06 Score=90.55 Aligned_cols=41 Identities=37% Similarity=0.528 Sum_probs=37.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CcEEEeeC-CccCcccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKG-LKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g-~~V~liE~-~~~GG~~~ 140 (551)
..+||+|||||++||+||..|++.| ++|+|+|+ +.+||.+.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~ 49 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQ 49 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCcee
Confidence 3479999999999999999999999 99999999 88999874
No 206
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.04 E-value=3.1e-06 Score=86.89 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=70.5
Q ss_pred ceEEEECCChhHHHHHHHHHh---CCCeEEEEcccCcCC--CC---------CCHHHHHHHHHHHhCCCceEEEeceEEE
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA---LGSEVTFIEALDQLM--PG---------FDPEIGKLAQRVLINPRKIDYHTGVFAT 335 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~~~l--~~---------~~~~~~~~~~~~l~~~~gi~~~~~~~~~ 335 (551)
++|+|||+|+.|+++|..|++ .|.+|+++++++.+. +. ...++...+.+.+++ .|++++.+ .+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~-~v~ 79 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPE-KGIQFQEG-TVE 79 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGG-GTCEEEEC-EEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhh-CCeEEEEe-eEE
Confidence 579999999999999999999 899999999887531 11 112233345556655 79999988 444
Q ss_pred -eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 -KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 -~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.+.+...|++.++. +...++.+|.||+|+|.+|+..
T Consensus 80 ~i~~~~~~V~~~~g~--~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 80 KIDAKSSMVYYTKPD--GSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EEETTTTEEEEECTT--SCEEEEECSEEEECCCCEECGG
T ss_pred EEeCCCCEEEEccCC--cccceeeCCEEEECCCCCcCcc
Confidence 32222256666542 1224689999999999988764
No 207
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.03 E-value=3.8e-06 Score=84.53 Aligned_cols=42 Identities=29% Similarity=0.423 Sum_probs=38.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC--ccCccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD--VVGGTCVN 141 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~--~~GG~~~~ 141 (551)
..+||+|||||++||+||..|++.|++|+|+|+. .+||+|..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 3479999999999999999999999999999985 79998873
No 208
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.03 E-value=2.6e-05 Score=76.36 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=69.0
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCc---CC---CC-------CCHHHHHHHHHHHhCCCceEEEeceEEE--
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ---LM---PG-------FDPEIGKLAQRVLINPRKIDYHTGVFAT-- 335 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~l---~~-------~~~~~~~~~~~~l~~~~gi~~~~~~~~~-- 335 (551)
.|+|||+|+.|+..|..+++.|.+|+++++... +. +. ..+++.+...+.+.+..++.++......
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 489999999999999999999999999987531 10 11 1244555555555553567777665544
Q ss_pred -eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 -KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 -~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.+.....+.+.++ +++.+|.||+|||.+|...
T Consensus 88 ~~~~~~~~v~~~~g------~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 88 KQSTGLFEIVTKDH------TKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp ECTTSCEEEEETTC------CEEEEEEEEECCCCEEECC
T ss_pred ecCCCcEEEEECCC------CEEEeCEEEEccCCccccc
Confidence 3344456666655 6899999999999988654
No 209
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.03 E-value=2.7e-06 Score=88.50 Aligned_cols=41 Identities=41% Similarity=0.601 Sum_probs=38.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
.++||+|||||++||+||..|++.|++|+|+|+ +.+||.+.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 358999999999999999999999999999999 78999875
No 210
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.03 E-value=2e-05 Score=82.96 Aligned_cols=94 Identities=20% Similarity=0.345 Sum_probs=69.1
Q ss_pred ccEEEECCChHHHHHHHHHHHc---CCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK---GLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAG 177 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~---g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 177 (551)
.+++|||||+.|+.+|..|++. |.+|+||++. .+. | .
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l---------~------------------------------~ 232 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL---------R------------------------------G 232 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC---------T------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc---------c------------------------------c
Confidence 5899999999999999999999 9999999983 211 0 0
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe--C---CcEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 178 YDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL--G---PQKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~---~~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
++ .++...+.+.+++.||+++.+.. ..+ + ...+.+.+|+++.+|.||+|+|.+|...
T Consensus 233 ~d------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 233 FD------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp SC------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred cC------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 11 12333445566778999998853 222 2 1356777788899999999999888753
No 211
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.01 E-value=3.2e-05 Score=80.36 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=67.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||+|+.|+.+|..+++.|.+|+++++ +.+... .++
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------------~~d- 188 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK--------------------------------------YFD- 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------------------------TCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc--------------------------------------cCC-
Confidence 5899999999999999999999999999998 321110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe---CCc-EEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL---GPQ-KVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~---~~~-~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+.+.+++.||+++.+.. ..+ +.. .+.++++ ++.+|.||+|+|..|...
T Consensus 189 -----------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~ 247 (452)
T 3oc4_A 189 -----------KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLA 247 (452)
T ss_dssp -----------HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCS
T ss_pred -----------HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChH
Confidence 22334455566778999998753 222 222 3556665 899999999999988754
No 212
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.01 E-value=4e-05 Score=75.12 Aligned_cols=96 Identities=23% Similarity=0.203 Sum_probs=70.0
Q ss_pred eEEEECCChhHHHHHHHHHhCCC-eEEEEcccCc-----------CCCCC----C-HHHHHHHHHHHhCCCceEEEeceE
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGS-EVTFIEALDQ-----------LMPGF----D-PEIGKLAQRVLINPRKIDYHTGVF 333 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~-----------~l~~~----~-~~~~~~~~~~l~~~~gi~~~~~~~ 333 (551)
+|+|||+|+.|+.+|..|++.|. +|+++++... ..+.+ + .++.+.+.+.+++ .+++++....
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~v~~~~~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFR-FGLKHEMTAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHT-TSCEEECSCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHH-cCCEEEEEEE
Confidence 69999999999999999999999 9999997521 01222 2 4566667777776 7999987432
Q ss_pred EE--eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 334 AT--KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 334 ~~--~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.. .+++...+++.++ +++.+|.|++|+|..|...
T Consensus 82 ~~i~~~~~~~~v~~~~g------~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 82 QRVSKKDSHFVILAEDG------KTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp EEEEEETTEEEEEETTS------CEEEEEEEEECCCEEECCC
T ss_pred EEEEEcCCEEEEEEcCC------CEEECCEEEECCCCCCCCC
Confidence 22 3344455655543 5799999999999887654
No 213
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.01 E-value=1.3e-05 Score=81.48 Aligned_cols=96 Identities=20% Similarity=0.258 Sum_probs=69.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHH-------------HHHHHHhCCCceEEEeceEEE-
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGK-------------LAQRVLINPRKIDYHTGVFAT- 335 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~-------------~~~~~l~~~~gi~~~~~~~~~- 335 (551)
.+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ...+.+.. ...+.+++ .+|+++.++.+.
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-y~~~~l~~~l~g~~~~~~l~~~~~~~~~~-~~i~~~~~~~V~~ 87 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-YYRPRLNEIIAKNKSIDDILIKKNDWYEK-NNIKVITSEFATS 87 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-BCGGGHHHHHHSCCCGGGTBSSCHHHHHH-TTCEEECSCCEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-cccChhhHHHcCCCCHHHccCCCHHHHHH-CCCEEEeCCEEEE
Confidence 479999999999999999987889999999877531 11111111 12334444 799999997776
Q ss_pred eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 ~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.+.+...|++.++ +++.+|.+++|||.+|...
T Consensus 88 id~~~~~v~~~~g------~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 88 IDPNNKLVTLKSG------EKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EETTTTEEEETTS------CEEECSEEEECCCEEECCC
T ss_pred EECCCCEEEECCC------CEEECCEEEEecCCCcCCC
Confidence 3333336777665 6899999999999988765
No 214
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.00 E-value=3.2e-05 Score=80.88 Aligned_cols=95 Identities=23% Similarity=0.365 Sum_probs=67.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+ +.+... .++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------------~~~- 219 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--------------------------------------GID- 219 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--------------------------------------SCC-
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--------------------------------------ccC-
Confidence 5899999999999999999999999999998 322110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--CC---cEEEe-----CcceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--GP---QKVKF-----GTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~---~~v~~-----~~g~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+.+.+++.||+++.++.. .+ +. ..+.+ +++.++.+|.||+|+|.+|...
T Consensus 220 -----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 220 -----------MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 223334455667789999988532 22 22 23332 4567899999999999988754
No 215
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.00 E-value=4.1e-05 Score=76.91 Aligned_cols=94 Identities=20% Similarity=0.165 Sum_probs=71.3
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC-------CC--------CCC----HHHHHHHHHHHhCCCceEEEe
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL-------MP--------GFD----PEIGKLAQRVLINPRKIDYHT 330 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-------l~--------~~~----~~~~~~~~~~l~~~~gi~~~~ 330 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ .+ .+. .++.+.+.+.+++ .+++++.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~ 93 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAER-YNPDVVL 93 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHT-TCCEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHH-hCCEEEc
Confidence 58999999999999999999999999999987643 11 111 4566667777775 7899988
Q ss_pred ceEEE---eCCC-cEEEEEecccCCCCCeEEecCEEEEeecCCC
Q 008850 331 GVFAT---KDGK-PVTIELIDAKTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 331 ~~~~~---~~~~-~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p 370 (551)
+..+. .+++ ...+++.++ +++.+|.||+|+|..+
T Consensus 94 ~~~v~~i~~~~~~~~~v~~~~g------~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 94 NETVTKYTKLDDGTFETRTNTG------NVYRSRAVLIAAGLGA 131 (360)
T ss_dssp SCCEEEEEECTTSCEEEEETTS------CEEEEEEEEECCTTCS
T ss_pred CCEEEEEEECCCceEEEEECCC------cEEEeeEEEEccCCCc
Confidence 87665 2222 556666554 5799999999999843
No 216
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.00 E-value=3.1e-05 Score=82.03 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=69.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||||..|+.+|..+++.|.+|+++|+. .+. | .++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l---------~------------------------------~~~- 254 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK---------L------------------------------IKD- 254 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT---------T------------------------------CCS-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc---------c------------------------------ccc-
Confidence 58999999999999999999999999999983 211 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee----CC----cEEEeCcce-EEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL----GP----QKVKFGTDN-IVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~----~~----~~v~~~~g~-~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+... .+ +. ..|.+.+|+ ++.+|.||+|+|.+|...
T Consensus 255 -----------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 255 -----------NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred -----------HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 223334555667789999988532 22 22 346667776 899999999999998753
No 217
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.99 E-value=1.2e-05 Score=84.28 Aligned_cols=93 Identities=18% Similarity=0.179 Sum_probs=66.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||||+.|+.+|..|++.|.+|+|||+ +.+. |. ++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l---------~~------------------------------~~- 225 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM---------QG------------------------------AD- 225 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS---------TT------------------------------SC-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc---------cc------------------------------cC-
Confidence 5899999999999999999999999999998 3211 10 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--CC--cEEEeCc----ceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--GP--QKVKFGT----DNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~--~~v~~~~----g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+...+++.||+++.+... .+ +. ..+.+.+ ++++.+|.||+|+|.+|+.
T Consensus 226 -----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 226 -----------RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp -----------HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred -----------HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 223334455667789999988532 22 11 2455554 6678999999999998865
No 218
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.99 E-value=3.8e-05 Score=79.69 Aligned_cols=103 Identities=18% Similarity=0.111 Sum_probs=72.1
Q ss_pred CceEEEECCChhHHHHHHHHHhCCC--eEEEEcccCcCCCC---------------------------------------
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGS--EVTFIEALDQLMPG--------------------------------------- 307 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~l~~--------------------------------------- 307 (551)
.++|+|||+|+.|+.+|..|++.|. +|+++++.+.+...
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4789999999999999999999999 99999987532100
Q ss_pred -------------C--------------CHHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCC-CeE
Q 008850 308 -------------F--------------DPEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEP-KDT 356 (551)
Q Consensus 308 -------------~--------------~~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~-~~~ 356 (551)
+ ..++.+++.+..++ .++.+++++.+. .+++...|++.+... +. ..+
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~-G~~~~~ 163 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQP-LLPFIKLATDVLDIEKKDGSWVVTYKGTKA-GSPISK 163 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGG-GGGGEECSEEEEEEEEETTEEEEEEEESST-TCCEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hhCeEEeCCEEEEEEeCCCeEEEEEeecCC-CCeeEE
Confidence 0 01345556666654 577788888776 344556677665211 11 137
Q ss_pred EecCEEEEeecC--CCCCC
Q 008850 357 LEVDAALIATGR--APFTN 373 (551)
Q Consensus 357 i~~D~vi~a~G~--~p~~~ 373 (551)
+.+|.||+|+|. .|+..
T Consensus 164 ~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp EEESEEEECCCSSSSBCBC
T ss_pred EEeCEEEECCCCCCCCCCC
Confidence 899999999998 66654
No 219
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.98 E-value=2.8e-06 Score=88.65 Aligned_cols=40 Identities=30% Similarity=0.488 Sum_probs=37.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcC------CcEEEeeC-CccCcccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKG------LKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g------~~V~liE~-~~~GG~~~ 140 (551)
++||+|||||++||+||..|++.| ++|+|+|+ +.+||.+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~ 51 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQ 51 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEE
Confidence 479999999999999999999999 99999999 68998765
No 220
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.98 E-value=2.5e-05 Score=82.14 Aligned_cols=94 Identities=20% Similarity=0.247 Sum_probs=67.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+. .+... .++
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------------~~~- 235 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG--------------------------------------YYD- 235 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------------TSC-
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh--------------------------------------HHH-
Confidence 58999999999999999999999999999983 21110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CC--cEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GP--QKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~--~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+.+.+++.||+++.+. +..+ +. ..+.+ ++.++.+|.||+|+|..|..+
T Consensus 236 -----------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 236 -----------RDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp -----------HHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred -----------HHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChH
Confidence 2233344556677899999885 3322 22 13555 567899999999999887653
No 221
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.97 E-value=6.1e-06 Score=86.79 Aligned_cols=41 Identities=22% Similarity=0.412 Sum_probs=37.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
..+||+|||||++||+||..|++.|++|+|+|+ +.+||.+.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~ 51 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVW 51 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCcee
Confidence 357999999999999999999999999999999 78999754
No 222
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.97 E-value=4.3e-06 Score=87.63 Aligned_cols=42 Identities=21% Similarity=0.504 Sum_probs=36.8
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
...+||+|||||++||+||..|++.|++|+|+|+ +.+||.+.
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceee
Confidence 3457999999999999999999999999999999 78998765
No 223
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.96 E-value=5.3e-06 Score=83.81 Aligned_cols=40 Identities=33% Similarity=0.503 Sum_probs=37.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVN 141 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~ 141 (551)
+||+|||||++|+++|..|++.|++|+|+|+ +.+||.|..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 7999999999999999999999999999999 789998864
No 224
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.95 E-value=7.2e-06 Score=82.63 Aligned_cols=39 Identities=26% Similarity=0.412 Sum_probs=34.6
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGG 137 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG 137 (551)
..++||+|||||++|+++|.+|++.|++|+|||+..+++
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~ 42 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPED 42 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCC
Confidence 446899999999999999999999999999999955543
No 225
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.94 E-value=3.5e-05 Score=82.97 Aligned_cols=93 Identities=19% Similarity=0.280 Sum_probs=69.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+... ++
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------~~- 227 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP---------------------------------------ID- 227 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------------------------------------SC-
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc---------------------------------------CC-
Confidence 5899999999999999999999999999998 321100 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC--CcEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG--PQKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+...+++.||+++.+. +..+. ...|.+.+++++.+|.||+|+|..|..
T Consensus 228 -----------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 228 -----------YEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEECC
T ss_pred -----------HHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCCh
Confidence 2233344556677899999875 33332 246778888899999999999988764
No 226
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.94 E-value=4e-05 Score=79.93 Aligned_cols=94 Identities=27% Similarity=0.345 Sum_probs=66.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+. .+. | .++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------~------------------------------~~~- 211 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL---------P------------------------------NED- 211 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------T------------------------------TSC-
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc---------c------------------------------ccC-
Confidence 58999999999999999999999999999983 211 1 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--CC--cEEEeC-cc--eEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--GP--QKVKFG-TD--NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~--~~v~~~-~g--~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+.+.+++.||+++.+... .+ +. ..+.+. ++ .++.+|.||+|+|..|+..
T Consensus 212 -----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 212 -----------ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp -----------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCS
T ss_pred -----------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCC
Confidence 123333445566789999988532 22 22 234443 44 6799999999999988754
No 227
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.93 E-value=4.4e-05 Score=75.42 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=69.8
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc-----------CCCCC-----CHHHHHHHHHHHhCCCceEEEeceE
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ-----------LMPGF-----DPEIGKLAQRVLINPRKIDYHTGVF 333 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-----------~l~~~-----~~~~~~~~~~~l~~~~gi~~~~~~~ 333 (551)
.+|+|||+|+.|+..|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++ .|++++.+..
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~gv~~~~~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEK-FGAKVEMDEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHH-TTCEEEECCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHH-cCCEEEeeeE
Confidence 5799999999999999999999999999998621 01222 23556666676765 7899887533
Q ss_pred EE--eC--CCc-EEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 334 AT--KD--GKP-VTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 334 ~~--~~--~~~-~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.. .+ ++. ..+.+.++ .++.+|.|++|+|..|...
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g------~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYN------GEYRAKAVILATGADPRKL 126 (325)
T ss_dssp EEEEECTTSSSCCEEEEESS------CEEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCceEEEEECCC------CEEEeCEEEECcCCCcCCC
Confidence 32 22 222 45555554 5799999999999987654
No 228
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.93 E-value=5.2e-06 Score=86.93 Aligned_cols=39 Identities=23% Similarity=0.496 Sum_probs=36.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--cEEEeeC-CccCcccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL--KTAIIEG-DVVGGTCV 140 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~-~~~GG~~~ 140 (551)
+||+|||||++||+||.+|++.|+ +|+|+|+ +.+||.+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceE
Confidence 699999999999999999999999 9999999 88999875
No 229
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.93 E-value=8.2e-06 Score=85.92 Aligned_cols=40 Identities=35% Similarity=0.601 Sum_probs=37.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
++||+|||||++||+||..|++.|++|+|+|+ +.+||.+.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 48999999999999999999999999999999 78998765
No 230
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.93 E-value=4.3e-06 Score=86.41 Aligned_cols=95 Identities=19% Similarity=0.211 Sum_probs=66.6
Q ss_pred ceEEEECCChhHHHHHHHHHhCC--CeEEEEcccCcCC--CC--------CCH-HHHHHHHHHHhCCCceEEEeceEEEe
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALG--SEVTFIEALDQLM--PG--------FDP-EIGKLAQRVLINPRKIDYHTGVFATK 336 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--~~--------~~~-~~~~~~~~~l~~~~gi~~~~~~~~~~ 336 (551)
|+|+|||+|+.|+.+|..|++.+ .+||++++++.+. |. +++ ++...+.+.+++ .||+++.+.....
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~-~gv~~i~~~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPK-FNIEFINEKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGG-GTEEEECSCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHH-CCcEEEEeEEEEE
Confidence 78999999999999999999875 7899999887532 11 111 111112234444 6899988864443
Q ss_pred CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCC
Q 008850 337 DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPF 371 (551)
Q Consensus 337 ~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~ 371 (551)
+.+...|++.+| +++++|.+++|||.++.
T Consensus 82 d~~~~~V~~~~g------~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DPDANTVTTQSG------KKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ETTTTEEEETTC------CEEECSEEEECCCCEEE
T ss_pred ECCCCEEEECCC------CEEECCEEEEeCCCCcc
Confidence 333346777665 68999999999998764
No 231
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.92 E-value=4.4e-05 Score=80.40 Aligned_cols=93 Identities=22% Similarity=0.272 Sum_probs=68.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||+|+.|+.+|..+++.|.+|+++|+. .+... ++
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------~d- 222 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY---------------------------------------ED- 222 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC---------------------------------------SS-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---------------------------------------cC-
Confidence 58999999999999999999999999999983 21110 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe--CC--cEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL--GP--QKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~~--~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+.+.+++.||+++.++. ..+ +. ..+.+.+++++.+|.||+|+|.+|+.
T Consensus 223 -----------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 223 -----------ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 22333445566778999998853 222 22 24555677789999999999998875
No 232
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.92 E-value=6.5e-06 Score=85.07 Aligned_cols=97 Identities=16% Similarity=0.141 Sum_probs=67.4
Q ss_pred ceEEEECCChhHHHHHHHHHh--CCCeEEEEcccCcCCCC----------C-CHHHHHHHHHHHhCCCceEEEeceEEEe
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA--LGSEVTFIEALDQLMPG----------F-DPEIGKLAQRVLINPRKIDYHTGVFATK 336 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~----------~-~~~~~~~~~~~l~~~~gi~~~~~~~~~~ 336 (551)
++|+|||+|+.|+..|..|++ .|.+|+++++.+.+... . ..++...+.+.+++ .||+++.+.....
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPK-FNIEFINEKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGG-GTEEEECSCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHh-cCCEEEEEEEEEE
Confidence 689999999999999999999 78999999998764211 0 01111112333443 7899987643333
Q ss_pred CCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 337 DGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 337 ~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
+.+...+++.++ +++.+|.+++|+|.+|+.+
T Consensus 82 d~~~~~v~~~~g------~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPDANTVTTQSG------KKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETTTTEEEETTC------CEEECSEEEECCCCEEECC
T ss_pred ECCCCEEEECCC------cEEECCEEEEcCCcccccC
Confidence 222235666554 5799999999999998765
No 233
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.91 E-value=3.4e-05 Score=82.67 Aligned_cols=93 Identities=18% Similarity=0.275 Sum_probs=67.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++++. .+. | .++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~------------------------------~~~- 191 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM---------T------------------------------PVD- 191 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC---------T------------------------------TSC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc---------h------------------------------hcC-
Confidence 48999999999999999999999999999983 211 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEeC---------------------C--cEEEeCcceEEEeCeEE
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TILG---------------------P--QKVKFGTDNIVTAKDII 236 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~---------------------~--~~v~~~~g~~i~~d~lV 236 (551)
..+...+...+++.||+++.+.. ..+. . ..+.+.+++++.+|.||
T Consensus 192 -----------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi 260 (565)
T 3ntd_A 192 -----------REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLI 260 (565)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEE
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEE
Confidence 22333444566778999998742 2211 1 14556777899999999
Q ss_pred EeCCCCCCC
Q 008850 237 IATGSVPFV 245 (551)
Q Consensus 237 lAtG~~p~~ 245 (551)
+|+|..|..
T Consensus 261 ~a~G~~p~~ 269 (565)
T 3ntd_A 261 MAIGVRPET 269 (565)
T ss_dssp ECSCEEECC
T ss_pred ECcCCccch
Confidence 999988764
No 234
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.91 E-value=5.4e-05 Score=79.03 Aligned_cols=94 Identities=19% Similarity=0.309 Sum_probs=65.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||||+.|+.+|..|++.|.+|+++|+. .+. | .++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------~------------------------------~~d- 214 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA---------P------------------------------TLD- 214 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------T------------------------------TSC-
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc---------c------------------------------cCC-
Confidence 58999999999999999999999999999983 211 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHcCeEEEeceE-EEe--CC--cEEEeC--cc--eEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSM-KALGVDILTGVG-TIL--GP--QKVKFG--TD--NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~--~~--~~v~~~--~g--~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+.+.+ ++.||+++.+.. ..+ +. ..+.+. +| .++.+|.||+|+|..|...
T Consensus 215 -----------~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 215 -----------EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp -----------HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred -----------HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 22333445556 778999998753 222 22 234443 45 6799999999999988754
No 235
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.91 E-value=7.9e-06 Score=83.53 Aligned_cols=97 Identities=15% Similarity=0.099 Sum_probs=67.3
Q ss_pred CceEEEECCChhHHHHHHHHHhCC--CeEEEEcccCcCCCC----------CCHH-HHHHHHHHHhCCCceEEEeceEEE
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALG--SEVTFIEALDQLMPG----------FDPE-IGKLAQRVLINPRKIDYHTGVFAT 335 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~l~~----------~~~~-~~~~~~~~l~~~~gi~~~~~~~~~ 335 (551)
+|+|+|||+|+.|+.+|..|++.+ .+|+++++++..... .+.+ +.... +.+.+ .||+++.+....
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~-~~~~~-~gv~~i~~~v~~ 79 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGY-DGLRA-HGIQVVHDSALG 79 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECS-HHHHH-TTCEEECSCEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCH-HHHHH-CCCEEEEeEEEE
Confidence 689999999999999999998875 589999987753211 1111 10111 22333 689998876544
Q ss_pred eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 ~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.+.+...+.+.++ .++.+|.+++|+|.+++..
T Consensus 80 id~~~~~v~~~~g------~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 80 IDPDKKLVKTAGG------AEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp EETTTTEEEETTS------CEEECSEEEECCCEEECGG
T ss_pred EEccCcEEEeccc------ceeecceeeeccCCccccC
Confidence 3333345666665 6899999999999987754
No 236
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.90 E-value=5.5e-05 Score=76.58 Aligned_cols=95 Identities=17% Similarity=0.136 Sum_probs=72.5
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-----------------------------------------
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG----------------------------------------- 307 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 307 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred ---CC-----------HHHHHHHHHHHhCCCceEEEeceEEE--eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCC
Q 008850 308 ---FD-----------PEIGKLAQRVLINPRKIDYHTGVFAT--KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPF 371 (551)
Q Consensus 308 ---~~-----------~~~~~~~~~~l~~~~gi~~~~~~~~~--~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~ 371 (551)
++ .++.+.+.+.+.+ .|++++.++.++ .. +. .|++.++ +++.+|.||.|+|..+.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~-~~-~v~~~~g------~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARA-LGVDISVNSEAVAADP-VG-RLTLQTG------EVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHH-TTCEEESSCCEEEEET-TT-EEEETTS------CEEECSEEEECCCTTCH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHh-cCCEEEeCCEEEEEEe-CC-EEEECCC------CEEEcCEEEECCCccHH
Confidence 00 2345556666665 689999998777 33 34 6777654 57999999999998775
Q ss_pred C
Q 008850 372 T 372 (551)
Q Consensus 372 ~ 372 (551)
.
T Consensus 162 v 162 (379)
T 3alj_A 162 V 162 (379)
T ss_dssp H
T ss_pred H
Confidence 4
No 237
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.90 E-value=9.4e-06 Score=83.87 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=37.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCCc----cCcccccCCccCCh
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDV----VGGTCVNRGCVPSK 148 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~----~GG~~~~~g~~p~~ 148 (551)
+++||+||||||+|+++|..|++.|++|+|||+.. .+|.+....|.+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~ 73 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAV 73 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccch
Confidence 34799999999999999999999999999999843 23444444555443
No 238
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.90 E-value=9.3e-06 Score=85.19 Aligned_cols=42 Identities=36% Similarity=0.503 Sum_probs=38.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CcEEEeeC-CccCccccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKG-LKTAIIEG-DVVGGTCVN 141 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g-~~V~liE~-~~~GG~~~~ 141 (551)
..+||+|||||++||++|..|++.| .+|+|+|+ +.+||.|..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 4589999999999999999999998 79999999 789998864
No 239
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.89 E-value=2.8e-05 Score=82.31 Aligned_cols=96 Identities=14% Similarity=0.213 Sum_probs=71.8
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC------------------------------------C------C
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL------------------------------------M------P 306 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~------------------------------------l------~ 306 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++++.+ + +
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987432 0 0
Q ss_pred CC--------------C----------------HHHHHHHHHHHhCCCceEEEeceEEE---eCC-CcEEEEEecccCCC
Q 008850 307 GF--------------D----------------PEIGKLAQRVLINPRKIDYHTGVFAT---KDG-KPVTIELIDAKTKE 352 (551)
Q Consensus 307 ~~--------------~----------------~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~-~~~~v~~~~g~~~~ 352 (551)
.+ + .++.+.+.+.+++ .|+++++++.+. .++ ....|++.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~-~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G---- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIE-LGGEIRFSTRVDDLHMEDGQITGVTLSNG---- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHH-TTCEEESSCCEEEEEESSSBEEEEEETTS----
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHh-cCCEEEeCCEEEEEEEeCCEEEEEEECCC----
Confidence 00 0 2344455566665 799999998776 333 3345777665
Q ss_pred CCeEEecCEEEEeecCCCC
Q 008850 353 PKDTLEVDAALIATGRAPF 371 (551)
Q Consensus 353 ~~~~i~~D~vi~a~G~~p~ 371 (551)
+++.+|.||+|+|..+.
T Consensus 262 --~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 262 --EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp --CEEECSCEEECCCTTCH
T ss_pred --CEEECCEEEECCCCChh
Confidence 57999999999999874
No 240
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.89 E-value=3.2e-05 Score=81.04 Aligned_cols=93 Identities=25% Similarity=0.328 Sum_probs=65.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
..+|+|||||+.|+.+|..|++.|.+|+|+|+. .+.. .++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------------~~~ 226 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------------IYD 226 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------------SSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------------cCC
Confidence 368999999999999999999999999999983 2111 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe--CCc--EEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL--GPQ--KVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~~~--~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
.++...+...+++.||+++.+.. ..+ +.. .+.++ +.++.+|.||+|+|..|..
T Consensus 227 ------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~~ 284 (480)
T 3cgb_A 227 ------------GDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPNT 284 (480)
T ss_dssp ------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEESC
T ss_pred ------------HHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcCh
Confidence 12333445566778999998752 222 222 24444 4579999999999988764
No 241
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.89 E-value=5e-05 Score=80.77 Aligned_cols=97 Identities=25% Similarity=0.266 Sum_probs=71.3
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC--------CC-------------CC----------------HHH
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM--------PG-------------FD----------------PEI 312 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------~~-------------~~----------------~~~ 312 (551)
.+|+|||+|..|+.+|..|++.|.+|+++++.+.+. |. +. +++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 579999999999999999999999999999865331 00 11 355
Q ss_pred HHHHHHHHhCCCce--EEEeceEEE---eCC--CcEEEEEecccCCCCCeEEecCEEEEeec--CCCCCC
Q 008850 313 GKLAQRVLINPRKI--DYHTGVFAT---KDG--KPVTIELIDAKTKEPKDTLEVDAALIATG--RAPFTN 373 (551)
Q Consensus 313 ~~~~~~~l~~~~gi--~~~~~~~~~---~~~--~~~~v~~~~g~~~~~~~~i~~D~vi~a~G--~~p~~~ 373 (551)
.+++.+..++ .++ ++++++.+. .++ ....|++.+| +++.+|.||+|+| .+|...
T Consensus 102 ~~yl~~~~~~-~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G------~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 102 LAYLEHVADR-FDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG------DEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHH-TTCGGGEECSCCEEEEEEETTTTEEEEEETTC------CEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHH-cCCCccEEECCEEEEEEEcCCCCEEEEEECCC------CEEEeCEEEECcCCCCCCCCC
Confidence 6667776665 676 777777666 222 3566776655 5799999999999 566554
No 242
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.88 E-value=2.1e-05 Score=80.66 Aligned_cols=94 Identities=13% Similarity=0.170 Sum_probs=69.9
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC---------------------------CC-------------
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP---------------------------GF------------- 308 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------~~------------- 308 (551)
...|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 35799999999999999999999999999998764310 00
Q ss_pred ------------------------CHHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCE
Q 008850 309 ------------------------DPEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDA 361 (551)
Q Consensus 309 ------------------------~~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~ 361 (551)
..++.+.+.+.+++ .|++++.++.+. .+++.+.|++.+ .++.+|.
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~-~Gv~i~~~~~V~~i~~~~~~~~V~~~~-------g~i~ad~ 178 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKE-AGVQLRLETSIGEVERTASGFRVTTSA-------GTVDAAS 178 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHH-HTCEEECSCCEEEEEEETTEEEEEETT-------EEEEESE
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHH-CCCEEEECCEEEEEEEeCCEEEEEECC-------cEEEeeE
Confidence 01344555666665 799999998776 344556666543 2799999
Q ss_pred EEEeecCCC
Q 008850 362 ALIATGRAP 370 (551)
Q Consensus 362 vi~a~G~~p 370 (551)
||+|+|..+
T Consensus 179 VIlAtG~~S 187 (417)
T 3v76_A 179 LVVASGGKS 187 (417)
T ss_dssp EEECCCCSS
T ss_pred EEECCCCcc
Confidence 999999876
No 243
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.88 E-value=4.7e-05 Score=74.61 Aligned_cols=96 Identities=18% Similarity=0.112 Sum_probs=70.9
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccC--cCC--------CC----CCHHHHHHHHHHHhCCCceEEEeceEEE-
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALD--QLM--------PG----FDPEIGKLAQRVLINPRKIDYHTGVFAT- 335 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~--~~l--------~~----~~~~~~~~~~~~l~~~~gi~~~~~~~~~- 335 (551)
+|+|||+|+.|+.+|..|++.|.+|+++++.. .+. .. ..+++.+.+.+.+++ .+++++.++.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~v~~ 81 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDE-YDVDVIDSQSASK 81 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHT-SCEEEECSCCEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHH-cCCeEEccCEEEE
Confidence 68999999999999999999999999997531 110 01 123566777777776 899999996655
Q ss_pred e--C---CCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 K--D---GKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 ~--~---~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
. + ++...+++.++ +++.+|.+++|+|..|...
T Consensus 82 i~~~~~~~~~~~v~~~~g------~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 82 LIPAAVEGGLHQIETASG------AVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp EECCSSTTCCEEEEETTS------CEEEEEEEEECCCEEECCC
T ss_pred EEecccCCceEEEEECCC------CEEEeCEEEECcCCCcCCC
Confidence 2 2 22566666554 5799999999999987653
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.88 E-value=6.2e-05 Score=73.73 Aligned_cols=97 Identities=22% Similarity=0.125 Sum_probs=70.5
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEE-EcccCcC------------CCCCC-----HHHHHHHHHHHhCCCceEEEe
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTF-IEALDQL------------MPGFD-----PEIGKLAQRVLINPRKIDYHT 330 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtl-v~~~~~~------------l~~~~-----~~~~~~~~~~l~~~~gi~~~~ 330 (551)
.++|+|||+|+.|+..|..|++.|.+|++ +++. .+ .+.++ .++...+.+.+++ .+++++.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~ 81 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMR-FGLKHEM 81 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTT-TCCEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHH-cCcEEEE
Confidence 36899999999999999999999999999 9873 21 12333 4677777888876 8999988
Q ss_pred ceEEEe-CC--CcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 331 GVFATK-DG--KPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 331 ~~~~~~-~~--~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
+..... ++ +...+.+... . ++.+|.+++|+|..|+..
T Consensus 82 ~~v~~i~~~~~~~~~v~~~~~-----~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 82 VGVEQILKNSDGSFTIKLEGG-----K-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp CCEEEEEECTTSCEEEEETTS-----C-EEEEEEEEECCCEEECCC
T ss_pred EEEEEEecCCCCcEEEEEecC-----C-EEEeCEEEEeeCCCCCCC
Confidence 733223 33 3344324332 2 789999999999988654
No 245
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.88 E-value=9.9e-06 Score=83.95 Aligned_cols=45 Identities=22% Similarity=0.309 Sum_probs=40.2
Q ss_pred CCCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCccccc
Q 008850 97 PKSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVN 141 (551)
Q Consensus 97 ~~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~ 141 (551)
.++..+||+|||+|.+|+++|..|++.|++|+++|+ +.+||.|..
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 455679999999999999999999999999999999 789998764
No 246
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.88 E-value=9.6e-06 Score=82.41 Aligned_cols=40 Identities=33% Similarity=0.569 Sum_probs=37.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
++||+|||||++|+++|..|++.|++|+|+|+ +.+||.|.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccc
Confidence 37999999999999999999999999999999 78999875
No 247
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.87 E-value=3.9e-05 Score=80.18 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=68.0
Q ss_pred ccEEEECCChHHHHHHHHHHHc-CCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK-GLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~-g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
.+++|||+|+.|+.+|..+++. |.+|+++++. .+... .++
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~--------------------------------------~~~ 201 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG--------------------------------------FTS 201 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT--------------------------------------TSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc--------------------------------------ccC
Confidence 5899999999999999999999 9999999983 21100 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe---CC-cEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL---GP-QKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~~-~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
..+...+...+++.||+++.+. +..+ +. ..+.+.+++++.+|.||+|+|..|..
T Consensus 202 ------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 202 ------------KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp ------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECC
T ss_pred ------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 2233344556677899999884 3322 12 23566777899999999999988764
No 248
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.87 E-value=8.4e-06 Score=86.06 Aligned_cols=41 Identities=32% Similarity=0.457 Sum_probs=37.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
..+||+|||||++||++|..|++.|++|+|+|+ +.+||.+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 357999999999999999999999999999999 78999764
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.87 E-value=2.7e-05 Score=80.94 Aligned_cols=99 Identities=21% Similarity=0.235 Sum_probs=66.7
Q ss_pred CceEEEECCChhHHHHHHHHHhC--CCeEEEEcccCcCC------CCCC---HHHH---HHHHHHH-hCCCceEEEeceE
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTAL--GSEVTFIEALDQLM------PGFD---PEIG---KLAQRVL-INPRKIDYHTGVF 333 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~l------~~~~---~~~~---~~~~~~l-~~~~gi~~~~~~~ 333 (551)
.++|+|||+|+.|+..|..|++. +.+|+++++.+.+. +.+- .... ....+.+ ++ .+|+++.++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~gi~v~~~~~ 81 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK-RGIDLHLNAE 81 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHH-TTCEEETTCE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh-cCcEEEecCE
Confidence 36899999999999999999998 78999999887531 1110 0111 1111222 33 7899999987
Q ss_pred EE-eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 334 AT-KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 334 ~~-~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
+. .+.+...+.+.++ ..++.+|.+++|||.+|...
T Consensus 82 v~~i~~~~~~v~~~~g-----~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 82 VIEVDTGYVRVRENGG-----EKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEEECSSEEEEECSSS-----EEEEECSEEEECCCEEECCC
T ss_pred EEEEecCCCEEEECCc-----eEEEEcCEEEECCCCCCCCC
Confidence 77 4444455554332 24789999999999988654
No 250
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=4.4e-05 Score=79.76 Aligned_cols=94 Identities=21% Similarity=0.311 Sum_probs=66.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+|+|+. .+... ++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~---------------------------------------~~- 217 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT---------------------------------------MD- 217 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---------------------------------------SC-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc---------------------------------------cc-
Confidence 58999999999999999999999999999983 21110 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-EeC--C--cEEEeC---cc--eEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-ILG--P--QKVKFG---TD--NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~--~--~~v~~~---~g--~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+.+.+++.||+++.+... .+. . ..+.+. ++ .++.+|.||+|+|..|...
T Consensus 218 -----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 218 -----------AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp -----------HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCT
T ss_pred -----------HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCC
Confidence 223334455667789999988533 222 2 234432 33 6799999999999888653
No 251
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.85 E-value=6.4e-05 Score=79.02 Aligned_cols=94 Identities=27% Similarity=0.392 Sum_probs=66.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+..|..|++.|.+|+++++ +.+.. .++
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------------~~d- 238 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG---------------------------------------GMD- 238 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS---------------------------------------SSC-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc---------------------------------------cCC-
Confidence 5899999999999999999999999999998 32111 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--CC--cEEEeCc---c--eEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--GP--QKVKFGT---D--NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~--~~v~~~~---g--~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+... .+ +. ..+.+.+ | .++.+|.||+|+|..|...
T Consensus 239 -----------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~ 303 (491)
T 3urh_A 239 -----------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTD 303 (491)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCT
T ss_pred -----------HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCC
Confidence 223334455667789999988532 22 11 2344432 3 6799999999999988754
No 252
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.85 E-value=6.4e-05 Score=78.82 Aligned_cols=94 Identities=23% Similarity=0.351 Sum_probs=68.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+++|||+|+.|+..|..+++.|.+|+++++. .+. | .++
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l---------~------------------------------~~~- 231 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL---------R------------------------------NFD- 231 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------T------------------------------TSC-
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc---------c------------------------------ccC-
Confidence 58999999999999999999999999999983 211 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--C--CcEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--G--PQKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~--~~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
..+...+...+++.||+++.+. +..+ + ...+.+.+++++.+|.||+|+|..|...
T Consensus 232 -----------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 232 -----------YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp -----------HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 1233344555667899999875 3222 1 2356777888899999999999887654
No 253
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.84 E-value=1.3e-05 Score=82.79 Aligned_cols=43 Identities=21% Similarity=0.316 Sum_probs=39.1
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCccccc
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVN 141 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~ 141 (551)
...+||+|||+|++|+++|..|++.|++|+|+|+ +.+||.|..
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 3458999999999999999999999999999999 789998764
No 254
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.84 E-value=9.6e-05 Score=77.32 Aligned_cols=94 Identities=23% Similarity=0.281 Sum_probs=66.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||+|+.|+..|..|++.|.+|+++++ +.+.. .++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------------~~~- 220 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP---------------------------------------AVD- 220 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------------------------------------TSC-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc---------------------------------------ccC-
Confidence 5899999999999999999999999999998 32110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--C--CcEEEeCc--c-eEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--G--PQKVKFGT--D-NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~--~~~v~~~~--g-~~i~~d~lVlAtG~~p~~p 246 (551)
..+...+...+++.||+++.+... .+ + ...+.+.+ + .++.+|.||+|+|..|...
T Consensus 221 -----------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 221 -----------EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp -----------HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred -----------HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 223334455667789999988532 22 1 22344443 3 6799999999999887654
No 255
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.84 E-value=6.8e-05 Score=78.16 Aligned_cols=102 Identities=17% Similarity=0.232 Sum_probs=71.0
Q ss_pred ceEEEECCChhHHHHHHHHHh---CCCe---EEEEcccCcCCC-------------------------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA---LGSE---VTFIEALDQLMP------------------------------------- 306 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~---~g~~---Vtlv~~~~~~l~------------------------------------- 306 (551)
++|+|||+|+.|+..|..|++ .|.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 999998754210
Q ss_pred CC---------------CHHHHHHHHHHHhCCCceE--EEeceEEE---eCCC--cEEEEEecccCCCCCeEEecCEEEE
Q 008850 307 GF---------------DPEIGKLAQRVLINPRKID--YHTGVFAT---KDGK--PVTIELIDAKTKEPKDTLEVDAALI 364 (551)
Q Consensus 307 ~~---------------~~~~~~~~~~~l~~~~gi~--~~~~~~~~---~~~~--~~~v~~~~g~~~~~~~~i~~D~vi~ 364 (551)
.+ ..++.+++.+..++ .+++ +++++.+. .+++ ...|++.++.. +...++.+|.||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~-g~~~~~~~d~VVv 160 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEK-AGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTT-DTIYSEEFDYVVC 160 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHH-HTCGGGEECSEEEEEEEEETTTTEEEEEEEETTT-TEEEEEEESEEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHH-cCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCC-CceEEEEcCEEEE
Confidence 00 02344556666654 6776 77787766 2222 45677655311 1125789999999
Q ss_pred eec--CCCCCC
Q 008850 365 ATG--RAPFTN 373 (551)
Q Consensus 365 a~G--~~p~~~ 373 (551)
|+| ..|+..
T Consensus 161 AtG~~s~p~~p 171 (464)
T 2xve_A 161 CTGHFSTPYVP 171 (464)
T ss_dssp CCCSSSSBCCC
T ss_pred CCCCCCCCccC
Confidence 999 677654
No 256
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.84 E-value=4.5e-05 Score=79.28 Aligned_cols=95 Identities=20% Similarity=0.271 Sum_probs=66.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++|+ +.+... .++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------------~~~- 190 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK--------------------------------------YFD- 190 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT--------------------------------------TSC-
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh--------------------------------------hhh-
Confidence 5899999999999999999999999999998 321100 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEeC--CcEE--EeCcceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTILG--PQKV--KFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v--~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+. +..+. ...+ ...+++++.+|.||+|+|..|...
T Consensus 191 -----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 191 -----------KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCG
T ss_pred -----------hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHH
Confidence 2233344556777899999885 32221 2222 223567899999999999888643
No 257
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.84 E-value=8.8e-05 Score=74.58 Aligned_cols=94 Identities=22% Similarity=0.316 Sum_probs=67.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCC-eEEEEcccC------c------C-CCC-------C--------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGS-EVTFIEALD------Q------L-MPG-------F-------------------- 308 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~------~------~-l~~-------~-------------------- 308 (551)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ . + .+. +
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999998 999999875 0 0 000 0
Q ss_pred -C-HHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCC
Q 008850 309 -D-PEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPF 371 (551)
Q Consensus 309 -~-~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~ 371 (551)
. .++...+.+.+++ .|++++.+..+. .+++...|+..++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~-~gv~i~~~~~v~~i~~~~~~~~v~~~~g-------~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANH-YELNIFENTVVTNISADDAYYTIATTTE-------TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHH-TTCEEECSCCEEEEEECSSSEEEEESSC-------CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHH-cCCeEEeCCEEEEEEECCCeEEEEeCCC-------EEEeCEEEECCCCCCc
Confidence 0 2344555666665 799999887655 3334455655432 5889999999998754
No 258
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.83 E-value=8.7e-05 Score=77.97 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=64.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+... ++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------~d- 214 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL---------------------------------------QD- 214 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC---------------------------------------CC-
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc---------------------------------------CC-
Confidence 5899999999999999999999999999998 322110 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee--CC--cEEEeC--cc--eEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL--GP--QKVKFG--TD--NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~--~~v~~~--~g--~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++. |+++.+... .+ +. ..+.+. +| .++.+|.||+|+|..|...
T Consensus 215 -----------~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~ 277 (492)
T 3ic9_A 215 -----------EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVD 277 (492)
T ss_dssp -----------HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCS
T ss_pred -----------HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCC
Confidence 12233334445555 888877532 22 22 234442 45 6799999999999988754
No 259
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.83 E-value=6.2e-05 Score=79.09 Aligned_cols=94 Identities=19% Similarity=0.204 Sum_probs=66.2
Q ss_pred ccEEEECCChHHHHHHHHHHH----cCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccc
Q 008850 102 YDLIIIGAGVGGHGAALHAVE----KGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAA 176 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~----~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 176 (551)
.+|+|||||+.|+.+|..|++ .|.+|+++++. .+.+..
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~------------------------------------- 223 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI------------------------------------- 223 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-------------------------------------
Confidence 589999999999999999877 47899999873 211100
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CC--cEEEeCcceEEEeCeEEEeCCCCCCC
Q 008850 177 GYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GP--QKVKFGTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~--~~v~~~~g~~i~~d~lVlAtG~~p~~ 245 (551)
++ ..+...+...+++.||+++.+. +..+ +. ..+.+.+|+++.+|.||+|+|..|..
T Consensus 224 -l~------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 224 -LP------------EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp -SC------------HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred -CC------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 00 1222334456677899999885 3322 12 24667788899999999999998864
No 260
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.83 E-value=1.1e-05 Score=84.38 Aligned_cols=40 Identities=30% Similarity=0.513 Sum_probs=36.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcC--CcEEEeeC-CccCcccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKG--LKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g--~~V~liE~-~~~GG~~~ 140 (551)
++||+|||||++|+++|..|++.| ++|+|+|+ +.+||.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeE
Confidence 479999999999999999999999 99999999 78888655
No 261
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.82 E-value=7.8e-05 Score=77.72 Aligned_cols=94 Identities=20% Similarity=0.274 Sum_probs=68.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC-ccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYD 179 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (551)
..+++|||+|+.|+..|..+++.|.+|+++++. .+.. .++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~---------------------------------------~~~ 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS---------------------------------------RFD 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------------TSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc---------------------------------------ccC
Confidence 358999999999999999999999999999983 2110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--C-C--cEEE-eCcceEEEeCeEEEeCCCCCCCC
Q 008850 180 RQGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--G-P--QKVK-FGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~-~--~~v~-~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+. +..+ + . ..|. +.+|+ +.+|.||+|+|..|...
T Consensus 211 ------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 211 ------------QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp ------------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred ------------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 2233445556777899999875 3222 1 2 2566 77776 99999999999887654
No 262
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.81 E-value=9.6e-05 Score=72.65 Aligned_cols=96 Identities=18% Similarity=0.182 Sum_probs=69.6
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc-----------CCCCC-----CHHHHHHHHHHHhCCCceEEEeceE
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ-----------LMPGF-----DPEIGKLAQRVLINPRKIDYHTGVF 333 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-----------~l~~~-----~~~~~~~~~~~l~~~~gi~~~~~~~ 333 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ .+++.+.+.+.+++ .+++++.+..
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATK-FETEIIFDHI 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHH-TTCEEECCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHH-CCCEEEEeee
Confidence 5799999999999999999999999999985310 11222 24566666666765 7899998873
Q ss_pred EE--eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 334 AT--KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 334 ~~--~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.. .+++.+.+ +.++ .++.+|.+++|+|..|...
T Consensus 85 ~~i~~~~~~~~v-~~~~------~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 85 NKVDLQNRPFRL-NGDN------GEYTCDALIIATGASARYL 119 (320)
T ss_dssp EEEECSSSSEEE-EESS------CEEEEEEEEECCCEEECCC
T ss_pred eEEEecCCEEEE-EeCC------CEEEcCEEEECCCCCcCCC
Confidence 33 23344444 4443 5799999999999987654
No 263
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.79 E-value=9.4e-05 Score=72.51 Aligned_cols=96 Identities=16% Similarity=0.121 Sum_probs=69.1
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCc----C------------CCCC-----CHHHHHHHHHHHhCCCceEEE
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ----L------------MPGF-----DPEIGKLAQRVLINPRKIDYH 329 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~----~------------l~~~-----~~~~~~~~~~~l~~~~gi~~~ 329 (551)
.|+|||+|+.|+..|..+++.|.+|+++++... + .+.+ .+++.+...+.+++ .++++.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~-~~~~~~ 84 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEK-YGTTII 84 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHH-TTCEEE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhh-cCcEEE
Confidence 599999999999999999999999999987541 0 0112 14455566666665 788887
Q ss_pred eceEEE--eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 330 TGVFAT--KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 330 ~~~~~~--~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
...... .+.+...+...++ .++.+|.+++|||.+|...
T Consensus 85 ~~~v~~~~~~~~~~~~~~~~~------~~~~~~~liiATG~~~~~~ 124 (314)
T 4a5l_A 85 TETIDHVDFSTQPFKLFTEEG------KEVLTKSVIIATGATAKRM 124 (314)
T ss_dssp CCCEEEEECSSSSEEEEETTC------CEEEEEEEEECCCEEECCC
T ss_pred EeEEEEeecCCCceEEEECCC------eEEEEeEEEEccccccccc
Confidence 766544 3344444554443 6899999999999988654
No 264
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.79 E-value=1.7e-05 Score=83.61 Aligned_cols=40 Identities=28% Similarity=0.498 Sum_probs=37.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
.+||+|||||++||++|..|++.|++|+|+|+ +.+||.+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 47999999999999999999999999999999 78999764
No 265
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.78 E-value=0.00011 Score=76.51 Aligned_cols=92 Identities=20% Similarity=0.250 Sum_probs=65.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCc-cCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDV-VGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++++.. +. | ++
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------~-------------------------------~~- 215 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF---------R-------------------------------ED- 215 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT---------T-------------------------------SC-
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC---------C-------------------------------CC-
Confidence 589999999999999999999999999999832 10 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEece-EEEe--CC--cEEEeCcceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGV-GTIL--GP--QKVKFGTDNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~--~~v~~~~g~~i~~d~lVlAtG~~p~~p 246 (551)
..+...+...+++.||+++.+. +..+ +. ..+.++ +.++.+|.||+|+|.+|...
T Consensus 216 -----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 216 -----------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred -----------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 1233344556677899999874 2222 12 234555 45799999999999988743
No 266
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.78 E-value=7.7e-05 Score=79.20 Aligned_cols=97 Identities=19% Similarity=0.181 Sum_probs=70.9
Q ss_pred ceEEEECCChhHHHHHHHHH-hCCCeEEEEcccCcCC--------CC-------------C----------------CHH
Q 008850 270 DWIAIVGSGYIGLEFSDVYT-ALGSEVTFIEALDQLM--------PG-------------F----------------DPE 311 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~-~~g~~Vtlv~~~~~~l--------~~-------------~----------------~~~ 311 (551)
.+|+|||+|+.|+.+|..|+ +.|.+|+++++.+.+. |. + .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 8999999999865431 11 1 134
Q ss_pred HHHHHHHHHhCCCce--EEEeceEEE---eCC--CcEEEEEecccCCCCCeEEecCEEEEeecC--CCCCC
Q 008850 312 IGKLAQRVLINPRKI--DYHTGVFAT---KDG--KPVTIELIDAKTKEPKDTLEVDAALIATGR--APFTN 373 (551)
Q Consensus 312 ~~~~~~~~l~~~~gi--~~~~~~~~~---~~~--~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~--~p~~~ 373 (551)
+.+++.+..++ .++ ++++++.+. .++ ....|++.+| +++.+|.||+|+|. +|...
T Consensus 89 i~~~l~~~~~~-~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G------~~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 89 ILEYLEDVVDR-FDLRRHFKFGTEVTSALYLDDENLWEVTTDHG------EVYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHHH-TTCGGGEEESCCEEEEEEETTTTEEEEEETTS------CEEEEEEEEECCCSCCSBCCC
T ss_pred HHHHHHHHHHH-cCCcceeEeccEEEEEEEeCCCCEEEEEEcCC------CEEEeCEEEECCcccccCCCC
Confidence 56666666665 677 777777665 222 3566777665 57999999999994 56544
No 267
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.77 E-value=4.9e-05 Score=75.27 Aligned_cols=95 Identities=20% Similarity=0.173 Sum_probs=69.7
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcc----cCcC------------CCCC-----CHHHHHHHHHHHhCCCceEE
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEA----LDQL------------MPGF-----DPEIGKLAQRVLINPRKIDY 328 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~----~~~~------------l~~~-----~~~~~~~~~~~l~~~~gi~~ 328 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+ .+.+ ..++.+.+.+.+++ .++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~gv~~ 87 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSER-FGTTI 87 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHH-TTCEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHH-CCCEE
Confidence 5799999999999999999999999999997 2211 1122 13556666666765 78999
Q ss_pred EeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 329 HTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 329 ~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
+.+. +. .+++...+++ ++ .++.+|.||+|+|..|...
T Consensus 88 ~~~~-v~~i~~~~~~~~v~~-~~------~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 88 FTET-VTKVDFSSKPFKLFT-DS------KAILADAVILAIGAVAKRL 127 (333)
T ss_dssp ECCC-CCEEECSSSSEEEEC-SS------EEEEEEEEEECCCEEECCC
T ss_pred EEeE-EEEEEEcCCEEEEEE-CC------cEEEcCEEEECCCCCcCCC
Confidence 8886 33 3344455654 33 5799999999999987654
No 268
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.76 E-value=0.00011 Score=74.98 Aligned_cols=97 Identities=26% Similarity=0.328 Sum_probs=68.2
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC------CCHHHHHHHHHH-----------------------
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG------FDPEIGKLAQRV----------------------- 319 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------~~~~~~~~~~~~----------------------- 319 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+...+.+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999988754221 344433333221
Q ss_pred --------------------HhC-CCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCC
Q 008850 320 --------------------LIN-PRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPF 371 (551)
Q Consensus 320 --------------------l~~-~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~ 371 (551)
+.+ -.+++++.++.+. .+++.+.+++.++ +++.+|.||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g------~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDG------TKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTS------CEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCC------CEEECCEEEECCCcchh
Confidence 100 0156677776665 3455677777665 57999999999998764
No 269
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.75 E-value=0.0001 Score=75.08 Aligned_cols=96 Identities=17% Similarity=0.207 Sum_probs=71.2
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC----------------------------------------C--
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP----------------------------------------G-- 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------------------------~-- 307 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998654300 0
Q ss_pred -----------------CC-HHHHHHHHHHHhCCC-ceEEEeceEEE---eCCCcE--EEEEecccCCCCCeEEecCEEE
Q 008850 308 -----------------FD-PEIGKLAQRVLINPR-KIDYHTGVFAT---KDGKPV--TIELIDAKTKEPKDTLEVDAAL 363 (551)
Q Consensus 308 -----------------~~-~~~~~~~~~~l~~~~-gi~~~~~~~~~---~~~~~~--~v~~~~g~~~~~~~~i~~D~vi 363 (551)
++ .++.+.+.+.+++ . |++++.++.++ .+++.+ .+++.+| +++.+|.||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g------~~~~ad~vV 159 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDG-EATVEMLFETRIEAVQRDERHAIDQVRLNDG------RVLRPRVVV 159 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTT-CTTEEEECSCCEEEEEECTTSCEEEEEETTS------CEEEEEEEE
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhh-cCCcEEEcCCEEEEEEEcCCceEEEEEECCC------CEEECCEEE
Confidence 00 1344555566654 5 89999988776 344555 6777654 479999999
Q ss_pred EeecCCCCC
Q 008850 364 IATGRAPFT 372 (551)
Q Consensus 364 ~a~G~~p~~ 372 (551)
.|.|.....
T Consensus 160 ~AdG~~s~v 168 (399)
T 2x3n_A 160 GADGIASYV 168 (399)
T ss_dssp ECCCTTCHH
T ss_pred ECCCCChHH
Confidence 999987643
No 270
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.74 E-value=0.00015 Score=75.67 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=68.5
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC-------------------------------CCCHH-H-----
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP-------------------------------GFDPE-I----- 312 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~~~~-~----- 312 (551)
..|+|||+|+.|+..|..|++.|.+|+++++.+.+.. .++.. +
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 3699999999999999999999999999997664311 11111 0
Q ss_pred -----H--HHHHHHHhCCCceEEEeceEEEeCCCcEEEEEecccCCCCCeE--EecCEEEEeecCCCCCC
Q 008850 313 -----G--KLAQRVLINPRKIDYHTGVFATKDGKPVTIELIDAKTKEPKDT--LEVDAALIATGRAPFTN 373 (551)
Q Consensus 313 -----~--~~~~~~l~~~~gi~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~--i~~D~vi~a~G~~p~~~ 373 (551)
. ..+.+.+++ .+|+++.+.....+.+...+...++ ++ +.+|.+++|+|.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~-~~v~~~~g~v~~id~~~~~V~~~~g------~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQY-ETLTFYKGYVKIKDPTHVIVKTDEG------KEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTC-TTEEEESEEEEEEETTEEEEEETTS------CEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHh-CCCEEEEeEEEEecCCeEEEEcCCC------cEEEEecCEEEECCCCCccCC
Confidence 0 233344444 7999998853334555566665443 45 99999999999988764
No 271
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.74 E-value=0.00017 Score=71.00 Aligned_cols=96 Identities=22% Similarity=0.173 Sum_probs=68.6
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc-----------CCCCC----CHHHHHHHHHHHhCCCceEEEeceEE
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ-----------LMPGF----DPEIGKLAQRVLINPRKIDYHTGVFA 334 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-----------~l~~~----~~~~~~~~~~~l~~~~gi~~~~~~~~ 334 (551)
.+|+|||+|+.|+..|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++ .+++++.....
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAAN-YAKIREGVEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHT-TSEEEETCCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHH-cCCEEEEeeEE
Confidence 5799999999999999999999999999997421 01221 23555666677776 79998884332
Q ss_pred E--eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 335 T--KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 335 ~--~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
. .+++...++. ++ .++.+|.+++|+|..|...
T Consensus 96 ~i~~~~~~~~v~~-~~------~~~~~~~li~AtG~~~~~~ 129 (319)
T 3cty_A 96 SIKKTQGGFDIET-ND------DTYHAKYVIITTGTTHKHL 129 (319)
T ss_dssp EEEEETTEEEEEE-SS------SEEEEEEEEECCCEEECCC
T ss_pred EEEEeCCEEEEEE-CC------CEEEeCEEEECCCCCcccC
Confidence 2 3344444554 32 4789999999999887654
No 272
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.74 E-value=2e-05 Score=85.16 Aligned_cols=41 Identities=29% Similarity=0.482 Sum_probs=34.3
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcc
Q 008850 98 KSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGT 138 (551)
Q Consensus 98 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~ 138 (551)
+...+||+|||||++|+++|..|++.|++|+|||+ ...||.
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGL 84 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCc
Confidence 33568999999999999999999999999999999 445553
No 273
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.73 E-value=8.8e-05 Score=72.81 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=63.0
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCc---C--------CCCC----CHHHHHHHHHHHhCCCceEEEeceEEE
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ---L--------MPGF----DPEIGKLAQRVLINPRKIDYHTGVFAT 335 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------l~~~----~~~~~~~~~~~l~~~~gi~~~~~~~~~ 335 (551)
.|+|||+|+.|+..|..|++.|.+|+++++... + .|.+ .+++.........+ .++.+..+....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 86 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKK-FGAVYQYGDIKS 86 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHH-TTCEEEECCCCE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhh-ccccccceeeee
Confidence 599999999999999999999999999987531 1 1221 23454544455544 556655554333
Q ss_pred --eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 --KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 --~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
..... .+...++ +++.+|.+++|||.+|...
T Consensus 87 ~~~~~~~-~~~~~~~------~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 87 VEDKGEY-KVINFGN------KELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEECSSC-EEEECSS------CEEEEEEEEECCCEEECCC
T ss_pred eeeeecc-eeeccCC------eEEEeceeEEcccCccCcC
Confidence 22222 2222232 6899999999999988654
No 274
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.72 E-value=6.6e-05 Score=79.79 Aligned_cols=97 Identities=20% Similarity=0.211 Sum_probs=68.5
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC--------C-----------------------C------CCHHH
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM--------P-----------------------G------FDPEI 312 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------~-----------------------~------~~~~~ 312 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++++.+. | . -.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 579999999999999999999999999999876431 0 0 12456
Q ss_pred HHHHHHHHhCCCce--EEEeceEEE----e-CCCcEEEEEecccCCCCCeEEecCEEEEeec--CCCCCC
Q 008850 313 GKLAQRVLINPRKI--DYHTGVFAT----K-DGKPVTIELIDAKTKEPKDTLEVDAALIATG--RAPFTN 373 (551)
Q Consensus 313 ~~~~~~~l~~~~gi--~~~~~~~~~----~-~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G--~~p~~~ 373 (551)
.+++.+..++ .++ .+++++.+. . +.....|++.+| +++.+|.||+|+| .+|+..
T Consensus 90 ~~yl~~~~~~-~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G------~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 90 LRYVNRAADA-MDVRKHYRFNTRVTAARYVENDRLWEVTLDNE------EVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp HHHHHHHHHH-HTCGGGEECSCCEEEEEEEGGGTEEEEEETTT------EEEEEEEEEECCCSCBC---C
T ss_pred HHHHHHHHHH-cCCcCcEEECCEEEEEEEeCCCCEEEEEECCC------CEEEeCEEEECcCCCCCCcCC
Confidence 6666666654 555 566666555 2 234556777655 6899999999999 566554
No 275
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.71 E-value=0.00013 Score=76.23 Aligned_cols=94 Identities=23% Similarity=0.218 Sum_probs=66.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+.. .++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------------~~d- 227 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR---------------------------------------SFD- 227 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------------TSC-
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc---------------------------------------ccC-
Confidence 5899999999999999999999999999998 32110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee---CCc---EEEeCc-------ceEEEeCeEEEeCCCCCCCC
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL---GPQ---KVKFGT-------DNIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~---~~~---~v~~~~-------g~~i~~d~lVlAtG~~p~~p 246 (551)
..+...+...+++.||+++.+... .+ +.. .+.+.+ +.++.+|.||+|+|..|...
T Consensus 228 -----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 228 -----------SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp -----------HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 223334455667789999988532 22 112 344443 26799999999999887754
No 276
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.71 E-value=0.00011 Score=75.01 Aligned_cols=94 Identities=14% Similarity=0.110 Sum_probs=68.7
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC---------------------------C---------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP---------------------------G--------------- 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------~--------------- 307 (551)
..|+|||+|+.|+.+|..+++.|.+|+++++.+.+.. .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 3699999999999999999999999999998764310 0
Q ss_pred ----------------------CCHHHHHHHHHHHhCCCceEEEeceEEE---eC----CCcEEEEEecccCCCCCeEEe
Q 008850 308 ----------------------FDPEIGKLAQRVLINPRKIDYHTGVFAT---KD----GKPVTIELIDAKTKEPKDTLE 358 (551)
Q Consensus 308 ----------------------~~~~~~~~~~~~l~~~~gi~~~~~~~~~---~~----~~~~~v~~~~g~~~~~~~~i~ 358 (551)
...++.+.+.+.+++ .||+++.++.+. .+ ++.+.|++.+ .++.
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~-~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~-------g~i~ 156 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDK-YGAKILLRSEVSQVERIQNDEKVRFVLQVNS-------TQWQ 156 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHH-HTCEEECSCCEEEEEECCSCSSCCEEEEETT-------EEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHH-CCCEEEeCCEEEEEEcccCcCCCeEEEEECC-------CEEE
Confidence 012333455556655 789999998775 23 3445555432 2689
Q ss_pred cCEEEEeecCCCC
Q 008850 359 VDAALIATGRAPF 371 (551)
Q Consensus 359 ~D~vi~a~G~~p~ 371 (551)
+|.||+|+|..+.
T Consensus 157 ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 157 CKNLIVATGGLSM 169 (401)
T ss_dssp ESEEEECCCCSSC
T ss_pred CCEEEECCCCccC
Confidence 9999999998874
No 277
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.71 E-value=0.00013 Score=72.38 Aligned_cols=98 Identities=18% Similarity=0.164 Sum_probs=70.5
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccC---c--------CCCCC-----CHHHHHHHHHHHhCCCceEEEece
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD---Q--------LMPGF-----DPEIGKLAQRVLINPRKIDYHTGV 332 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~---~--------~l~~~-----~~~~~~~~~~~l~~~~gi~~~~~~ 332 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.. . ..+.+ .+++.+.+.+.+++ .+++++.+.
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~v~~~~~~ 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALR-FGADLRMED 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHH-TTCEEECCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHH-cCCEEEEee
Confidence 4689999999999999999999999999998531 0 01222 24566666666765 789999887
Q ss_pred EEE-eCCCcEEE-EEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 333 FAT-KDGKPVTI-ELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 333 ~~~-~~~~~~~v-~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
... ..++...+ .+.++ +++.+|.+++|+|..|...
T Consensus 93 v~~i~~~~~~~v~~~~~g------~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 93 VESVSLHGPLKSVVTADG------QTHRARAVILAMGAAARYL 129 (335)
T ss_dssp EEEEECSSSSEEEEETTS------CEEEEEEEEECCCEEECCC
T ss_pred EEEEEeCCcEEEEEeCCC------CEEEeCEEEECCCCCccCC
Confidence 322 22333445 55443 5799999999999988654
No 278
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.70 E-value=0.00014 Score=76.43 Aligned_cols=91 Identities=13% Similarity=0.250 Sum_probs=64.3
Q ss_pred cEEEECCChHHHHHHHHHHHc--------------CCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhh
Q 008850 103 DLIIIGAGVGGHGAALHAVEK--------------GLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMK 167 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~--------------g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 167 (551)
.++|||||+.|+.+|..|++. +.+|+|||. +.+...
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~----------------------------- 269 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM----------------------------- 269 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-----------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-----------------------------
Confidence 699999999999999988754 267999998 332110
Q ss_pred hcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-EeCCcEEEe----Ccc----eEEEeCeEEEe
Q 008850 168 ALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGT-ILGPQKVKF----GTD----NIVTAKDIIIA 238 (551)
Q Consensus 168 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~v~~----~~g----~~i~~d~lVlA 238 (551)
++ +++.....+.+++.||+++.++.. .++...+.+ .++ +++.+|.||.|
T Consensus 270 ----------~~------------~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa 327 (502)
T 4g6h_A 270 ----------FE------------KKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWA 327 (502)
T ss_dssp ----------SC------------HHHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEEC
T ss_pred ----------CC------------HHHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEc
Confidence 11 344455566778899999998743 455544432 233 46999999999
Q ss_pred CCCCCC
Q 008850 239 TGSVPF 244 (551)
Q Consensus 239 tG~~p~ 244 (551)
+|..|.
T Consensus 328 ~Gv~~~ 333 (502)
T 4g6h_A 328 TGNKAR 333 (502)
T ss_dssp CCEECC
T ss_pred cCCcCC
Confidence 997764
No 279
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.68 E-value=0.00018 Score=75.45 Aligned_cols=94 Identities=19% Similarity=0.249 Sum_probs=65.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCHH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQ 181 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 181 (551)
.+++|||||+.|+..|..+++.|.+|+++++..+. | .++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l---------~------------------------------~~d-- 226 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL---------R------------------------------GFD-- 226 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS---------T------------------------------TSC--
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC---------c------------------------------ccC--
Confidence 47999999999999999999999999999874211 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEE-Ee---CC--cEEEeCcc-----eEEEeCeEEEeCCCCCCCC
Q 008850 182 GVADHANNLATKIRNNLTNSMKALGVDILTGVGT-IL---GP--QKVKFGTD-----NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~---~~--~~v~~~~g-----~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+... .+ +. ..+.+.++ .++.+|.||+|+|..|...
T Consensus 227 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 227 ----------QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp ----------HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred ----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 223334455667789999988532 22 12 23444433 3799999999999887643
No 280
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.68 E-value=0.00024 Score=75.12 Aligned_cols=94 Identities=14% Similarity=0.206 Sum_probs=64.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCHH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQ 181 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 181 (551)
.+++|||||+.|+..|..|++.|.+|+|+++..+. | .++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l---------~------------------------------~~d-- 249 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL---------R------------------------------GFD-- 249 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS---------T------------------------------TSC--
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc---------c------------------------------cCC--
Confidence 47999999999999999999999999999873211 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE----EEeCC---c--EEE--eCcc---eEEEeCeEEEeCCCCCCCC
Q 008850 182 GVADHANNLATKIRNNLTNSMKALGVDILTGVG----TILGP---Q--KVK--FGTD---NIVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~---~--~v~--~~~g---~~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+.. ...+. . .+. ..++ .++.+|.||+|+|..|...
T Consensus 250 ----------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~ 318 (519)
T 3qfa_A 250 ----------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTR 318 (519)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCS
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCC
Confidence 22333445566778999998842 11111 1 222 2333 3578999999999888654
No 281
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.68 E-value=0.00018 Score=76.13 Aligned_cols=98 Identities=18% Similarity=0.127 Sum_probs=73.1
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccC--cCC-----C---C----CCHHHHHHHHHHHhCCCceEEEeceEE
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD--QLM-----P---G----FDPEIGKLAQRVLINPRKIDYHTGVFA 334 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~--~~l-----~---~----~~~~~~~~~~~~l~~~~gi~~~~~~~~ 334 (551)
..+|+|||+|+.|+..|..|++.|.+|+++++.. .+. + . ..+++...+.+.+++ .|++++.++.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~v~~~~~v 290 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSD-YDVDVIDSQSA 290 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHT-SCEEEECSCCE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHH-cCCEEEcCCEE
Confidence 4679999999999999999999999999997531 111 0 0 124566777777776 89999999666
Q ss_pred E-e--C---CCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 335 T-K--D---GKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 335 ~-~--~---~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
. . + ++...+++.++ .++.+|.|++|+|..|...
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g------~~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASG------AVLKARSIIIATGAKWRNM 329 (521)
T ss_dssp EEEECCSSTTSCEEEEETTS------CEEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCceEEEEECCC------CEEEcCEEEECCCCCcCCC
Confidence 5 2 1 23566776554 5799999999999877543
No 282
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.68 E-value=0.00023 Score=74.65 Aligned_cols=94 Identities=20% Similarity=0.290 Sum_probs=65.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCHH
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQ 181 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 181 (551)
.+++|||||+.|+..|..|++.|.+|+++++..+. | .++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l---------~------------------------------~~d-- 224 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL---------R------------------------------GFD-- 224 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS---------T------------------------------TSC--
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc---------c------------------------------cCC--
Confidence 47999999999999999999999999999974210 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEe---CC--cEEEeCc---ce--EEEeCeEEEeCCCCCCCC
Q 008850 182 GVADHANNLATKIRNNLTNSMKALGVDILTGVG-TIL---GP--QKVKFGT---DN--IVTAKDIIIATGSVPFVP 246 (551)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~---~~--~~v~~~~---g~--~i~~d~lVlAtG~~p~~p 246 (551)
.++...+...+++.||+++.+.. ..+ +. ..+.+.+ ++ ++.+|.||+|+|..|...
T Consensus 225 ----------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 225 ----------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 22333445566778999998853 222 22 2344332 43 578999999999887653
No 283
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.65 E-value=2.8e-05 Score=79.35 Aligned_cols=31 Identities=39% Similarity=0.546 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
.+|+||||||+||++|..|++.|++|+||||
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 4899999999999999999999999999998
No 284
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.65 E-value=3.4e-05 Score=80.15 Aligned_cols=89 Identities=22% Similarity=0.350 Sum_probs=67.3
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC-------CCC--CCHHHHHHHHHHHhCCCceEEEeceEEEeCC
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL-------MPG--FDPEIGKLAQRVLINPRKIDYHTGVFATKDG 338 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-------l~~--~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~ 338 (551)
.+++|+|||+|+.|+..|..|++.|.+|+++++.+.+ +|. ++.++.+...+.+++ .||+++.+..+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~-~gv~~~~~~~v~--- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLAD-AGVIYHPNFEVG--- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHH-TTCEEETTCCBT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHH-CCcEEEeCCEec---
Confidence 3578999999999999999999999999999998765 233 356666666677776 899999886532
Q ss_pred CcEEEEEecccCCCCCeEEecCEEEEeecCC
Q 008850 339 KPVTIELIDAKTKEPKDTLEVDAALIATGRA 369 (551)
Q Consensus 339 ~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~ 369 (551)
. .+++.+ ..+.+|.|++|+|..
T Consensus 197 ~--~v~~~~-------~~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 R--DASLPE-------LRRKHVAVLVATGVY 218 (456)
T ss_dssp T--TBCHHH-------HHSSCSEEEECCCCC
T ss_pred c--EEEhhH-------hHhhCCEEEEecCCC
Confidence 1 122222 135799999999986
No 285
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.64 E-value=3.5e-05 Score=80.61 Aligned_cols=40 Identities=35% Similarity=0.581 Sum_probs=36.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-cEEEeeC-CccCcccc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEG-DVVGGTCV 140 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~-~~~GG~~~ 140 (551)
.+||+|||||++|+++|..|++.|+ +|+|+|+ +.+||.|.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMH 45 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCcee
Confidence 4799999999999999999999998 8999999 78999876
No 286
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.62 E-value=0.00026 Score=70.05 Aligned_cols=34 Identities=32% Similarity=0.454 Sum_probs=31.5
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
..|+|||+|++|+.+|..|++.|.+|+++++.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4799999999999999999999999999998764
No 287
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.57 E-value=0.00018 Score=74.96 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=69.9
Q ss_pred eEEEECCChhHHHHHHHHHhCC-----CeEEEEcccCcCC-------CC--C----------------------------
Q 008850 271 WIAIVGSGYIGLEFSDVYTALG-----SEVTFIEALDQLM-------PG--F---------------------------- 308 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g-----~~Vtlv~~~~~~l-------~~--~---------------------------- 308 (551)
.|+|||+|+.|+.+|..|++.| .+|+++++.+.+. +. +
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 6999999999999999999999 8999999876321 00 0
Q ss_pred --------------CHHHHHHHHHHHhCCCceEEEeceEEE---eC---CCc--EEEEEecccCCCCCeEEecCEEEEee
Q 008850 309 --------------DPEIGKLAQRVLINPRKIDYHTGVFAT---KD---GKP--VTIELIDAKTKEPKDTLEVDAALIAT 366 (551)
Q Consensus 309 --------------~~~~~~~~~~~l~~~~gi~~~~~~~~~---~~---~~~--~~v~~~~g~~~~~~~~i~~D~vi~a~ 366 (551)
..++.+++....++ .+++++.+..+. .+ ++. +.|++.++. ++..++.+|.||+|+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~--g~~~~~~~d~lVlAt 188 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASH-FQEQSRYGEEVLRIEPMLSAGQVEALRVISRNAD--GEELVRTTRALVVSP 188 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTT-CTTTEEESEEEEEEEEEEETTEEEEEEEEEEETT--SCEEEEEESEEEECC
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHH-cCCeEEeCCEEEEEEEecCCCceEEEEEEEecCC--CceEEEEeCEEEECC
Confidence 12344455555554 788888888766 22 222 356655542 222379999999999
Q ss_pred cCCCCCC
Q 008850 367 GRAPFTN 373 (551)
Q Consensus 367 G~~p~~~ 373 (551)
|..|...
T Consensus 189 G~~p~~p 195 (463)
T 3s5w_A 189 GGTPRIP 195 (463)
T ss_dssp CCEECCC
T ss_pred CCCCCCc
Confidence 9988654
No 288
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.57 E-value=0.00039 Score=74.87 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|||||+.|+.+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999974
No 289
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.57 E-value=5.8e-05 Score=82.33 Aligned_cols=41 Identities=37% Similarity=0.551 Sum_probs=37.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
..+||+|||||++|+++|..|.+.|++|+|+|+ +.+||.+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 457999999999999999999999999999999 78998754
No 290
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.52 E-value=4.9e-05 Score=76.07 Aligned_cols=33 Identities=30% Similarity=0.428 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHHHcC------CcEEEeeCCcc
Q 008850 103 DLIIIGAGVGGHGAALHAVEKG------LKTAIIEGDVV 135 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~g------~~V~liE~~~~ 135 (551)
||+|||||++|+++|.+|++.| ++|+|||+...
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 8999999999999999999998 99999999543
No 291
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.50 E-value=7.5e-05 Score=79.89 Aligned_cols=35 Identities=43% Similarity=0.752 Sum_probs=32.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCcc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVV 135 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~ 135 (551)
.+||+|||||++|+++|..|+++|++|+|||+..+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 48999999999999999999999999999999543
No 292
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.49 E-value=5.7e-05 Score=78.54 Aligned_cols=90 Identities=13% Similarity=0.109 Sum_probs=66.6
Q ss_pred CCceEEEECCChhHHHHHHHHHhCC--CeEEEEcccCcCC--------CCC--CHHHHHHHHHHHhCCCceEEEeceEEE
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALG--SEVTFIEALDQLM--------PGF--DPEIGKLAQRVLINPRKIDYHTGVFAT 335 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~~--~~~~~~~~~~~l~~~~gi~~~~~~~~~ 335 (551)
.+++|+|||+|+.|+.+|..|.+.| .+|+++++.+.+. |.+ ..++...+.+.+++ .||+++.+..+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~-~gv~~~~~~~v~ 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARS-DRCAFYGNVEVG 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTS-TTEEEEBSCCBT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHh-CCcEEEeeeEEe
Confidence 4578999999999999999999998 9999999987664 322 23455666677765 899999886441
Q ss_pred eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCC
Q 008850 336 KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 336 ~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p 370 (551)
.. |++.+ ..+.+|.||+|||..|
T Consensus 84 ---~~--V~~~~-------~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ---RD--VTVQE-------LQDAYHAVVLSYGAED 106 (460)
T ss_dssp ---TT--BCHHH-------HHHHSSEEEECCCCCE
T ss_pred ---eE--EEecc-------ceEEcCEEEEecCcCC
Confidence 11 22222 2468999999999885
No 293
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.49 E-value=9.4e-05 Score=81.61 Aligned_cols=39 Identities=38% Similarity=0.633 Sum_probs=35.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGT 138 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~ 138 (551)
..+||+|||||++|+++|..|++.|++|+|+|+ +.+||.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 358999999999999999999999999999999 778873
No 294
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.49 E-value=8.6e-05 Score=82.55 Aligned_cols=40 Identities=38% Similarity=0.564 Sum_probs=36.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTC 139 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~ 139 (551)
..+||+|||||++||++|..|++.|++|+|+|+ +.+||.+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 457999999999999999999999999999999 7888864
No 295
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.46 E-value=0.0005 Score=69.78 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=69.8
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC------CCC--------------C----------------------
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL------MPG--------------F---------------------- 308 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~------l~~--------------~---------------------- 308 (551)
+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ... +
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 83 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQR 83 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTEE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCce
Confidence 6999999999999999999999999999987631 000 0
Q ss_pred -----------------C-HHHHHHHHHHHhCCCceEEEeceEEE---eC-CCcEEEEE-ecccCCCCCeEEecCEEEEe
Q 008850 309 -----------------D-PEIGKLAQRVLINPRKIDYHTGVFAT---KD-GKPVTIEL-IDAKTKEPKDTLEVDAALIA 365 (551)
Q Consensus 309 -----------------~-~~~~~~~~~~l~~~~gi~~~~~~~~~---~~-~~~~~v~~-~~g~~~~~~~~i~~D~vi~a 365 (551)
+ .++.+.+.+.+.+ .|++++.++.++ .+ ++.+.+++ .+| ...++.+|.||.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g----~~~~~~a~~vV~A 158 (394)
T 1k0i_A 84 RRIDLKRLSGGKTVTVYGQTEVTRDLMEAREA-CGATTVYQAAEVRLHDLQGERPYVTFERDG----ERLRLDCDYIAGC 158 (394)
T ss_dssp EEECHHHHHTSCCEEECCHHHHHHHHHHHHHH-TTCEEESSCEEEEEECTTSSSCEEEEEETT----EEEEEECSEEEEC
T ss_pred EEeccccccCCCceEEechHHHHHHHHHHHHh-cCCeEEeceeEEEEEEecCCceEEEEecCC----cEEEEEeCEEEEC
Confidence 0 1233344455554 689999998877 22 34567777 444 1127999999999
Q ss_pred ecCCCCCC
Q 008850 366 TGRAPFTN 373 (551)
Q Consensus 366 ~G~~p~~~ 373 (551)
.|......
T Consensus 159 dG~~S~vr 166 (394)
T 1k0i_A 159 DGFHGISR 166 (394)
T ss_dssp CCTTCSTG
T ss_pred CCCCcHHH
Confidence 99877653
No 296
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.46 E-value=6.7e-05 Score=76.03 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHHHc--CCcEEEeeC-Ccc
Q 008850 103 DLIIIGAGVGGHGAALHAVEK--GLKTAIIEG-DVV 135 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~--g~~V~liE~-~~~ 135 (551)
||+|||||++|+++|..|++. |++|+|||+ +.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 899999999999999999999 999999999 443
No 297
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.42 E-value=0.00093 Score=71.41 Aligned_cols=97 Identities=15% Similarity=0.162 Sum_probs=66.4
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-----------------------------------------
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG----------------------------------------- 307 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 307 (551)
.-.|+|||+|..|++.|..+++.|.+|+++++.+..+..
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 458999999999999999999999999999976311000
Q ss_pred -------------CCH-HHHHHHHHHHhCCCceEEEeceEEE--eCCCcE-EEEEecccCCCCCeEEecCEEEEeecCCC
Q 008850 308 -------------FDP-EIGKLAQRVLINPRKIDYHTGVFAT--KDGKPV-TIELIDAKTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 308 -------------~~~-~~~~~~~~~l~~~~gi~~~~~~~~~--~~~~~~-~v~~~~g~~~~~~~~i~~D~vi~a~G~~p 370 (551)
.|. .+...+.+.+++..||+++.+.... .+++.+ .|.+.+| ..+.+|.||+|+|..+
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G------~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSG------RAIQAKAAILACGTFL 174 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS------CEEEEEEEEECCTTCB
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCC------cEEEeCEEEECcCCCC
Confidence 011 3344555666652489987653322 333333 3666554 5799999999999765
Q ss_pred C
Q 008850 371 F 371 (551)
Q Consensus 371 ~ 371 (551)
+
T Consensus 175 ~ 175 (641)
T 3cp8_A 175 N 175 (641)
T ss_dssp T
T ss_pred C
Confidence 4
No 298
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.41 E-value=0.0004 Score=76.07 Aligned_cols=94 Identities=16% Similarity=0.175 Sum_probs=64.6
Q ss_pred ccEEEEC--CChHHHHHHHHHHHcCCcEEEeeC-CccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCcccccccc
Q 008850 102 YDLIIIG--AGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGY 178 (551)
Q Consensus 102 ~dVvIIG--gG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (551)
.+|+||| +|..|+.+|..|++.|.+|+++++ +.+.....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~-------------------------------------- 565 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN-------------------------------------- 565 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG--------------------------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc--------------------------------------
Confidence 4799999 999999999999999999999998 33221100
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceE-EEeCCcEEEe-----CcceEEEeCeEEEeCCCCCCC
Q 008850 179 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVG-TILGPQKVKF-----GTDNIVTAKDIIIATGSVPFV 245 (551)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~v~~-----~~g~~i~~d~lVlAtG~~p~~ 245 (551)
+ ..+...+...+++.||+++.++. ..+....+.+ ++++++.+|.||+|+|..|..
T Consensus 566 ~------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 566 N------------TFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp G------------GTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECC
T ss_pred c------------chhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCCh
Confidence 0 00112234455678999999864 3333333322 246689999999999988763
No 299
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.41 E-value=0.00056 Score=70.79 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=68.0
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC--------------C-----------------------CC---
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP--------------G-----------------------FD--- 309 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------~-----------------------~~--- 309 (551)
..|+|||+|..|+.+|..|++.|.+|+++++.+.+.. . ++
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 4799999999999999999999999999998753210 0 00
Q ss_pred ---------------------------HHHHHHHHHHHhCCCceEEEeceEEE---eCCCc-EEEEEecccCCCCCeEEe
Q 008850 310 ---------------------------PEIGKLAQRVLINPRKIDYHTGVFAT---KDGKP-VTIELIDAKTKEPKDTLE 358 (551)
Q Consensus 310 ---------------------------~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~-~~v~~~~g~~~~~~~~i~ 358 (551)
..+.+.+.+.+++ .||+++.++.+. .+++. ..|++.++ +++.
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~-~GV~i~~~~~V~~i~~~~~~v~~V~~~~G------~~i~ 179 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKD-LGVKIRTNTPVETIEYENGQTKAVILQTG------EVLE 179 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHH-TTCEEECSCCEEEEEEETTEEEEEEETTC------CEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHH-CCCEEEeCcEEEEEEecCCcEEEEEECCC------CEEE
Confidence 1222344455554 789999988776 23333 56666554 4699
Q ss_pred cCEEEEeecCCC
Q 008850 359 VDAALIATGRAP 370 (551)
Q Consensus 359 ~D~vi~a~G~~p 370 (551)
+|.||+|+|..+
T Consensus 180 Ad~VVlAtGg~s 191 (447)
T 2i0z_A 180 TNHVVIAVGGKS 191 (447)
T ss_dssp CSCEEECCCCSS
T ss_pred CCEEEECCCCCc
Confidence 999999999876
No 300
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.35 E-value=0.00059 Score=72.51 Aligned_cols=97 Identities=23% Similarity=0.297 Sum_probs=66.3
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC--------C-------------CCC----------------HHH
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM--------P-------------GFD----------------PEI 312 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------~-------------~~~----------------~~~ 312 (551)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. | .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999875431 1 012 233
Q ss_pred HHHHHHHHhC-CCceEEEeceEEE----eC-CCcEEEEEecccCCCCCeEEecCEEEEeecC--CCCC
Q 008850 313 GKLAQRVLIN-PRKIDYHTGVFAT----KD-GKPVTIELIDAKTKEPKDTLEVDAALIATGR--APFT 372 (551)
Q Consensus 313 ~~~~~~~l~~-~~gi~~~~~~~~~----~~-~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~--~p~~ 372 (551)
.+++....++ ..++++++++.+. .+ .....|++.+| +++.+|.||+|+|. .|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G------~~~~ad~vV~AtG~~s~p~~ 158 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG------DRIRARYLIMASGQLSVPQL 158 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC------CEEEEEEEEECCCSCCCCCC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC------CEEEeCEEEECcCCCCCCCC
Confidence 4444444433 1235677777665 22 23456766554 57999999999995 4544
No 301
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.33 E-value=0.00063 Score=67.59 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=30.5
Q ss_pred ceEEEECCChhHHHHHHHHHh---CCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA---LGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~ 302 (551)
++|+|||+|.+|+-+|..|++ .|.+|+++++++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 479999999999999999999 899999999764
No 302
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.30 E-value=0.0012 Score=67.18 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=31.5
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 7999999999999999999999999999987644
No 303
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.30 E-value=0.00095 Score=68.29 Aligned_cols=98 Identities=17% Similarity=0.143 Sum_probs=66.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC--------CC----------------------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM--------PG---------------------------------- 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------~~---------------------------------- 307 (551)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... +.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 479999999999999999999999999999864110 00
Q ss_pred -----------------CC-HHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEee
Q 008850 308 -----------------FD-PEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIAT 366 (551)
Q Consensus 308 -----------------~~-~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~ 366 (551)
++ ..+...+.+.+++ .|++++.++.+. .+++...+.+... ++...++.+|.||.|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~~~v~v~~~--~g~~~~~~a~~vV~A~ 162 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAAR-QGVDVEYEVGVTDIKFFGTDSVTTIEDI--NGNKREIEARFIIDAS 162 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHH-HTCEEECSEEEEEEEEETTEEEEEEEET--TSCEEEEEEEEEEECC
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEeCCEEEEEEEcC--CCCEEEEEcCEEEECC
Confidence 00 1233445555554 689999998776 3334443444321 1122379999999999
Q ss_pred cCCC
Q 008850 367 GRAP 370 (551)
Q Consensus 367 G~~p 370 (551)
|...
T Consensus 163 G~~s 166 (421)
T 3nix_A 163 GYGR 166 (421)
T ss_dssp GGGC
T ss_pred CCch
Confidence 9764
No 304
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.30 E-value=0.0015 Score=69.95 Aligned_cols=96 Identities=15% Similarity=0.078 Sum_probs=66.1
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc-CC-----------------------CC------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ-LM-----------------------PG------------------ 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~l-----------------------~~------------------ 307 (551)
-.|+|||+|..|++.|..+++.|.+|+++++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999997631 10 00
Q ss_pred ------------CC-HHHHHHHHHHHhCCCceEEEeceEEE---eCCC-cEEEEEecccCCCCCeEEecCEEEEeecCCC
Q 008850 308 ------------FD-PEIGKLAQRVLINPRKIDYHTGVFAT---KDGK-PVTIELIDAKTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 308 ------------~~-~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~-~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p 370 (551)
.| ..+...+.+.+++..|++++.. .+. .+++ ...|.+.+| ..+.+|.||+|+|..+
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~-~V~~L~~e~g~V~GV~t~dG------~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMG------LKFRAKAVVLTVGTFL 181 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEESSSBEEEEEETTS------EEEEEEEEEECCSTTT
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEE-EEEEEEecCCEEEEEEECCC------CEEECCEEEEcCCCCc
Confidence 01 1234455566654358998544 444 2333 335666554 6799999999999866
Q ss_pred CC
Q 008850 371 FT 372 (551)
Q Consensus 371 ~~ 372 (551)
..
T Consensus 182 ~~ 183 (651)
T 3ces_A 182 DG 183 (651)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 305
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.27 E-value=0.00011 Score=76.26 Aligned_cols=88 Identities=22% Similarity=0.259 Sum_probs=65.1
Q ss_pred CceEEEECCChhHHHHHHHHHh-C------CCeEEEEcccCcCC--------CC--CCHHHHHHHHHHHhCCCceEEEec
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTA-L------GSEVTFIEALDQLM--------PG--FDPEIGKLAQRVLINPRKIDYHTG 331 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~-~------g~~Vtlv~~~~~~l--------~~--~~~~~~~~~~~~l~~~~gi~~~~~ 331 (551)
+++|+|||+|+.|+.+|..|.+ . +.+|+++++.+.+. |. ...++...+.+.+++ .+|+++.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~-~~v~~~~~ 81 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAED-PRFRFFGN 81 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTS-TTEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhc-CCCEEEee
Confidence 4689999999999999999999 7 99999999987643 21 123456666777765 89999888
Q ss_pred eEEEeCCCcEEEEEecccCCCCCeEEecCEEEEeecCC
Q 008850 332 VFATKDGKPVTIELIDAKTKEPKDTLEVDAALIATGRA 369 (551)
Q Consensus 332 ~~~~~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~ 369 (551)
+.+ + +. |++.++ .+.+|.||+|||..
T Consensus 82 v~v--~-~~--v~~~~~-------~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 82 VVV--G-EH--VQPGEL-------SERYDAVIYAVGAQ 107 (456)
T ss_dssp CCB--T-TT--BCHHHH-------HHHSSEEEECCCCC
T ss_pred EEE--C-CE--EEECCC-------eEeCCEEEEeeCCC
Confidence 542 1 11 223222 47899999999996
No 306
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.25 E-value=0.00016 Score=78.83 Aligned_cols=32 Identities=41% Similarity=0.483 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHHH-----cCCcEEEeeC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVE-----KGLKTAIIEG 132 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~-----~g~~V~liE~ 132 (551)
++||+||||||+||++|..|++ .|++|+|||+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~ 44 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDK 44 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeC
Confidence 4899999999999999999999 9999999998
No 307
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.25 E-value=0.001 Score=67.69 Aligned_cols=36 Identities=25% Similarity=0.431 Sum_probs=32.7
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 468999999999999999999999999999987643
No 308
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.25 E-value=0.0024 Score=68.11 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=65.9
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccC-cCC-----------------------CC------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD-QLM-----------------------PG------------------ 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l-----------------------~~------------------ 307 (551)
-.|+|||+|..|++.|..+++.|.+|.++++.+ .+. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 469999999999999999999999999999863 111 00
Q ss_pred ------------CC-HHHHHHHHHHHhCCCceEEEeceEEE---eCCC-cEEEEEecccCCCCCeEEecCEEEEeecCCC
Q 008850 308 ------------FD-PEIGKLAQRVLINPRKIDYHTGVFAT---KDGK-PVTIELIDAKTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 308 ------------~~-~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~-~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p 370 (551)
.| ..+...+.+.+++..||+++.. .+. .+++ ...|.+.+| ..+.+|.||+|+|..+
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~-~Vt~L~~e~g~V~GV~t~dG------~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQE-EVVDIIVKNNQVVGVRTNLG------VEYKTKAVVVTTGTFL 180 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEES-CEEEEEESSSBEEEEEETTS------CEEECSEEEECCTTCB
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEe-EEEEEEecCCEEEEEEECCC------cEEEeCEEEEccCCCc
Confidence 00 1234445556654248998544 444 3333 335666554 5799999999999876
Q ss_pred CC
Q 008850 371 FT 372 (551)
Q Consensus 371 ~~ 372 (551)
+.
T Consensus 181 ~~ 182 (637)
T 2zxi_A 181 NG 182 (637)
T ss_dssp TC
T ss_pred cC
Confidence 54
No 309
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.24 E-value=0.0014 Score=67.89 Aligned_cols=101 Identities=15% Similarity=0.146 Sum_probs=69.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC-----C-------------------------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP-----G------------------------------------- 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------------------------------------- 307 (551)
..|+|||+|+.|+.+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 3699999999999999999999999999998653210 0
Q ss_pred ----------CC-HHHHHHHHHHHhCCCceEEEeceEEE---eCCCcE-EEEEecccCCCCCeEEecCEEEEeecCCCCC
Q 008850 308 ----------FD-PEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPV-TIELIDAKTKEPKDTLEVDAALIATGRAPFT 372 (551)
Q Consensus 308 ----------~~-~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~-~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~ 372 (551)
++ ..+.+.+.+.+.+ .|++++.++.++ .+++.+ .|++.+.. +++..++.+|.||.|+|.....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~-~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQD-RGVEIWDLTTAMKPIFEDGYVKGAVLFNRR-TNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHH-TTCEEESSEEEEEEEEETTEEEEEEEEETT-TTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHH-cCCEEEeCcEEEEEEEECCEEEEEEEEEcC-CCceEEEEcCEEEECcCCchhh
Confidence 00 1244455555555 789999998877 333333 25554210 1112378999999999987654
No 310
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.24 E-value=0.0002 Score=81.92 Aligned_cols=93 Identities=19% Similarity=0.284 Sum_probs=68.4
Q ss_pred CceEEEECCChhHHHHHHHHHhCCC-eEEEEcccCcCC-------CC--CCHHHHHHHHHHHhCCCceEEEeceEEEeCC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGS-EVTFIEALDQLM-------PG--FDPEIGKLAQRVLINPRKIDYHTGVFATKDG 338 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~l-------~~--~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~ 338 (551)
+++|+|||+|+.|+..|..|++.|. +|+++++.+.+. +. +..+..++..+.+++ .||+++.+..+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~-~gv~~~~~~~v~~-- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKD-LGVKIICGKSLSE-- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHT-TTCEEEESCCBST--
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHH-CCcEEEcccEecc--
Confidence 5789999999999999999999998 799999876542 22 345555666677776 8999998865421
Q ss_pred CcEEEEEecccCCCCCeEEecCEEEEeecC-CCCC
Q 008850 339 KPVTIELIDAKTKEPKDTLEVDAALIATGR-APFT 372 (551)
Q Consensus 339 ~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~-~p~~ 372 (551)
+ .+++.++ .++.+|.|++|||. +|..
T Consensus 264 ~--~v~~~~~------~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 N--EITLNTL------KEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp T--SBCHHHH------HHTTCCEEEECCCCCEECC
T ss_pred c--eEEhhhc------CccCCCEEEEecCCCCCCC
Confidence 1 1233332 34689999999998 5754
No 311
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.19 E-value=0.0022 Score=63.98 Aligned_cols=33 Identities=30% Similarity=0.421 Sum_probs=31.0
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
..|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 312
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.19 E-value=0.0015 Score=69.85 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=31.8
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
..|+|||+|..|+..|..+++.|.+|+|+++.+.+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 47999999999999999999999999999987643
No 313
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.18 E-value=0.0019 Score=69.05 Aligned_cols=98 Identities=24% Similarity=0.198 Sum_probs=70.6
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC------------------------------------------
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP------------------------------------------ 306 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 306 (551)
...|+|||||+.|+-+|..|++.|.+|+++++.+....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 36899999999999999999999999999998631100
Q ss_pred ---------------------CCC-HHHHHHHHHHHhCCCceEEEeceEEE----eCCCcEEEEEecccCCCCCeEEecC
Q 008850 307 ---------------------GFD-PEIGKLAQRVLINPRKIDYHTGVFAT----KDGKPVTIELIDAKTKEPKDTLEVD 360 (551)
Q Consensus 307 ---------------------~~~-~~~~~~~~~~l~~~~gi~~~~~~~~~----~~~~~~~v~~~~g~~~~~~~~i~~D 360 (551)
.++ ..+...+.+.+++ .|++++.++.+. .+++.+.|++.++ +...++.+|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~---G~~~~i~Ad 178 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARS-RGITVHEETPVTDVDLSDPDRVVLTVRRG---GESVTVESD 178 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHH-TTCEEETTCCEEEEECCSTTCEEEEEEET---TEEEEEEES
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCCEEEEEEecC---CceEEEEcC
Confidence 001 2244455556655 799999997766 2356677877631 112579999
Q ss_pred EEEEeecCCC
Q 008850 361 AALIATGRAP 370 (551)
Q Consensus 361 ~vi~a~G~~p 370 (551)
.||.|+|...
T Consensus 179 lVV~AdG~~S 188 (591)
T 3i3l_A 179 FVIDAGGSGG 188 (591)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCcc
Confidence 9999999754
No 314
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.15 E-value=0.0015 Score=66.46 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=32.2
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 35899999999999999999999999999998764
No 315
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.15 E-value=0.00026 Score=75.33 Aligned_cols=34 Identities=44% Similarity=0.571 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..||+||||+|++|+.+|.+|.+.|++|+|+|+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g 39 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERG 39 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4599999999999999999999999999999984
No 316
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.14 E-value=0.0019 Score=68.40 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=71.1
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC-------------------------------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP------------------------------------------- 306 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 306 (551)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 5799999999999999999999999999998753210
Q ss_pred ------------C------------------CC-HHHHHHHHHHHhCCCceEEEeceEEE---eCCC----cEEEEEecc
Q 008850 307 ------------G------------------FD-PEIGKLAQRVLINPRKIDYHTGVFAT---KDGK----PVTIELIDA 348 (551)
Q Consensus 307 ------------~------------------~~-~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~----~~~v~~~~g 348 (551)
. ++ ..+...+.+.+++ .|++++.++.++ .+++ .+.+++.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~ 164 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARK-HGGAIRFGTRLLSFRQHDDDAGAGVTARLAGP 164 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEECGGGCSEEEEEEEET
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEECCCCccccEEEEEEcC
Confidence 0 00 1234455555655 689999998887 3444 677777664
Q ss_pred cCCCCCeEEecCEEEEeecCCC
Q 008850 349 KTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 349 ~~~~~~~~i~~D~vi~a~G~~p 370 (551)
.. ..++.+|.||.|.|...
T Consensus 165 ~~---~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 165 DG---EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TE---EEEEEEEEEEECCCTTC
T ss_pred CC---eEEEEeCEEEECCCCcc
Confidence 21 35799999999999753
No 317
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.14 E-value=0.0022 Score=64.63 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=30.2
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
..|+|||+|.+|+.+|..|++.|.+|+++++.
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 47999999999999999999999999999976
No 318
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.12 E-value=0.0011 Score=66.88 Aligned_cols=32 Identities=16% Similarity=0.218 Sum_probs=30.2
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
..|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 47999999999999999999999999999875
No 319
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.12 E-value=0.00045 Score=75.42 Aligned_cols=86 Identities=28% Similarity=0.389 Sum_probs=63.0
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC---------CCCC--HHHHHHHHHHHhCCCceEEEeceEEEeC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM---------PGFD--PEIGKLAQRVLINPRKIDYHTGVFATKD 337 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~~~~--~~~~~~~~~~l~~~~gi~~~~~~~~~~~ 337 (551)
.++|+|||+|+.|+..|..|++.|.+|+++++.+.+. +... .+..+.+.+.+++ .||+++.+..+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~~v~~- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEV-TGVTLKLNHTVTA- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHH-HTCEEEESCCCCS-
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHH-cCCEEEeCcEecH-
Confidence 3689999999999999999999999999999876542 1111 1233445555655 7898888753210
Q ss_pred CCcEEEEEecccCCCCCeEE-ecCEEEEeecCCCCCC
Q 008850 338 GKPVTIELIDAKTKEPKDTL-EVDAALIATGRAPFTN 373 (551)
Q Consensus 338 ~~~~~v~~~~g~~~~~~~~i-~~D~vi~a~G~~p~~~ 373 (551)
..+ .+|.|++|||.+|...
T Consensus 451 -----------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 -----------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp -----------------SSSCCSSEEEECCCEEECCC
T ss_pred -----------------HHhhcCCEEEEccCCCcCCC
Confidence 123 7999999999988765
No 320
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.09 E-value=0.0021 Score=64.45 Aligned_cols=32 Identities=28% Similarity=0.286 Sum_probs=30.1
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
.|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 69999999999999999999999999999764
No 321
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.09 E-value=0.00083 Score=70.43 Aligned_cols=98 Identities=19% Similarity=0.179 Sum_probs=66.2
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC----------CCC---HHHHHHHHHHHhCCCceEEEeceEEE-
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP----------GFD---PEIGKLAQRVLINPRKIDYHTGVFAT- 335 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------~~~---~~~~~~~~~~l~~~~gi~~~~~~~~~- 335 (551)
.+|+|||+|+.|+..|..|++. .+|+++++.+.+.. .++ .++...+.+.+ + .+|+++.+..+.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~-~~v~~~~~~~v~~ 185 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N-ENTKIYLETSALG 185 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C-TTEEEETTEEECC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h-cCCEEEcCCEEEE
Confidence 5799999999999999999999 99999998875421 112 12222333333 3 689999888776
Q ss_pred --eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 336 --KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 --~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
.+++...+...+. +....+.+|.+++|+|..|...
T Consensus 186 i~~~~~~~~~~~~~~---~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 186 VFDKGEYFLVPVVRG---DKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp CEECSSSEEEEEEET---TEEEEEEESCEEECCCEEECCC
T ss_pred EEcCCcEEEEEEecC---CeEEEEECCEEEECCCCCccCC
Confidence 3333333332221 1113689999999999887654
No 322
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.05 E-value=0.0028 Score=67.72 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=31.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
..|+|||+|..|+..|..|++.|.+|+++++.+.
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~ 160 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPI 160 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 5799999999999999999999999999998764
No 323
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.05 E-value=0.0016 Score=66.16 Aligned_cols=33 Identities=27% Similarity=0.202 Sum_probs=30.5
Q ss_pred ceEEEECCChhHHHHHHHHHh-CC-CeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA-LG-SEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~-~g-~~Vtlv~~~~ 302 (551)
..|+|||+|.+|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999764
No 324
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.04 E-value=0.0016 Score=69.49 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=31.3
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
-.|+|||+|..|+..|..|++.|.+|+++++.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4799999999999999999999999999998764
No 325
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.04 E-value=0.003 Score=63.68 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=30.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 369999999999999999999999999998764
No 326
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.03 E-value=0.0036 Score=65.66 Aligned_cols=98 Identities=18% Similarity=0.259 Sum_probs=71.3
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC-----C-----------------------------------
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG-----F----------------------------------- 308 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~----------------------------------- 308 (551)
...|+|||+|+.|+-+|..|++.|.+|+++++.+.+... +
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 357999999999999999999999999999976432110 0
Q ss_pred --------------CHHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCC
Q 008850 309 --------------DPEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 309 --------------~~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p 370 (551)
...+.+.+.+.+++ .|++++.++.++ .+++.+.+++.++. + ..++.+|.||.|.|...
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~v~v~~~~~~--g-~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALG-RGAELLRGHTVRALTDEGDHVVVEVEGPD--G-PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHH-TTCEEEESCEEEEEEECSSCEEEEEECSS--C-EEEEEEEEEEECCCTTC
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEeCCEEEEEEEcCC--C-cEEEEeCEEEEccCccc
Confidence 01233445555554 689999998877 45566778887652 1 24789999999999754
No 327
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.02 E-value=0.00027 Score=75.01 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=31.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..||+||||+|+||+.+|.+|.+ |.+|+|+|+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG 57 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERG 57 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSS
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecC
Confidence 45999999999999999999999 9999999994
No 328
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.01 E-value=0.0025 Score=64.17 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=30.6
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 489999999999999999999999999998654
No 329
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.01 E-value=0.00034 Score=74.07 Aligned_cols=33 Identities=27% Similarity=0.471 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHHHH-cCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVE-KGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~-~g~~V~liE~~ 133 (551)
+||+||||+|+||+.+|.+|++ .+++|+|||+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG 50 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAG 50 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 5999999999999999999998 67999999983
No 330
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.98 E-value=0.0036 Score=65.65 Aligned_cols=97 Identities=21% Similarity=0.235 Sum_probs=70.3
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC------------------------------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG------------------------------------------ 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 307 (551)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 91 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFG 91 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecccc
Confidence 57999999999999999999999999999876432100
Q ss_pred -CC-----------HHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCCeEEecCEEEEeecCCC
Q 008850 308 -FD-----------PEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 308 -~~-----------~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p 370 (551)
++ ..+.+.+.+.+++ .|++++.++.++ .+++.+.+++.++. + ..++.+|.||.|.|...
T Consensus 92 ~~~~~~~~~~~i~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~v~v~~~~~~--g-~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 92 VLEGAWQAAKTVPQSVTETHLEQWATG-LGADIRRGHEVLSLTDDGAGVTVEVRGPE--G-KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp GSTTGGGCEEEEEHHHHHHHHHHHHHH-TTCEEEETCEEEEEEEETTEEEEEEEETT--E-EEEEEESEEEECCCTTC
T ss_pred cCCCCCCceeecCHHHHHHHHHHHHHH-CCCEEECCcEEEEEEEcCCeEEEEEEcCC--C-CEEEEeCEEEECCCcch
Confidence 00 1233445555554 689999998877 45566778877652 1 24789999999999754
No 331
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.95 E-value=0.00045 Score=74.88 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcC--------CcEEEeeC-C-cc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKG--------LKTAIIEG-D-VV 135 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g--------~~V~liE~-~-~~ 135 (551)
.++|+|||||++||+||..|.+.| ++|+|+|+ + .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999998 99999999 6 78
No 332
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.94 E-value=0.0028 Score=67.62 Aligned_cols=96 Identities=17% Similarity=0.211 Sum_probs=69.6
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC-------------------------------------C-----C
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM-------------------------------------P-----G 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------~-----~ 307 (551)
..|+|||+|+.|+-+|..|++.|.+|+|+++.+... . .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 469999999999999999999999999999754311 0 0
Q ss_pred ---------------C-CHHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEEEEEecccCCCCC-eEEecCEEEEeec
Q 008850 308 ---------------F-DPEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVTIELIDAKTKEPK-DTLEVDAALIATG 367 (551)
Q Consensus 308 ---------------~-~~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~v~~~~g~~~~~~-~~i~~D~vi~a~G 367 (551)
+ ...+.+.+.+.+++ .|++++.++.++ .+++.+.+++.+. ++ +++.+|.||.|.|
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~l~~~~~~v~v~~~~~----~G~~~~~a~~vV~ADG 204 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHARE-AGAEIPRGHEVTRLRQDAEAVEVTVAGP----SGPYPVRARYGVGCDG 204 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHH-HTEECCBSCEEEECCBCSSCEEEEEEET----TEEEEEEESEEEECSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCeEEEEEEeC----CCcEEEEeCEEEEcCC
Confidence 0 12244555666655 689999998887 4556677777421 12 5799999999999
Q ss_pred CCC
Q 008850 368 RAP 370 (551)
Q Consensus 368 ~~p 370 (551)
...
T Consensus 205 ~~S 207 (570)
T 3fmw_A 205 GRS 207 (570)
T ss_dssp SSC
T ss_pred CCc
Confidence 654
No 333
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.94 E-value=0.0038 Score=68.15 Aligned_cols=33 Identities=27% Similarity=0.195 Sum_probs=31.0
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
..|+|||+|..|+-.|..|++.|.+|+++++.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 689999999999999999999999999999854
No 334
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.93 E-value=0.00047 Score=73.47 Aligned_cols=33 Identities=27% Similarity=0.534 Sum_probs=30.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CcEEEeeC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKG-LKTAIIEG 132 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g-~~V~liE~ 132 (551)
..||+||||||.||+.+|.+|.+.+ .+|+|||+
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEa 38 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEA 38 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEec
Confidence 3599999999999999999999987 79999999
No 335
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.93 E-value=0.00045 Score=76.10 Aligned_cols=88 Identities=18% Similarity=0.120 Sum_probs=57.7
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCC---------CC--HHHHHHHHHHHhC-----CCceEEEece
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG---------FD--PEIGKLAQRVLIN-----PRKIDYHTGV 332 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~--~~~~~~~~~~l~~-----~~gi~~~~~~ 332 (551)
.++|+|||+|+.|+..|..|++.|.+|+++++.+.+... +. ....+++.+.++. ..++++..+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~ 468 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQK 468 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCe
Confidence 468999999999999999999999999999987764321 11 1222333222221 1255554432
Q ss_pred EEEeCCCcEEEEEecccCCCCCeEEecCEEEEeecCCCC
Q 008850 333 FATKDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPF 371 (551)
Q Consensus 333 ~~~~~~~~~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~ 371 (551)
. +++.++ ..+.+|.|++|||..|.
T Consensus 469 ~---------v~~~~~------~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 469 P---------MTADDV------LQYGADKVIIATGARWN 492 (729)
T ss_dssp C---------CCHHHH------HTSCCSEEEECCCEEEC
T ss_pred E---------Eehhhc------cccCCCEEEEcCCCCcc
Confidence 1 222222 35789999999999864
No 336
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.91 E-value=0.0033 Score=64.13 Aligned_cols=102 Identities=19% Similarity=0.164 Sum_probs=67.5
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCe-EEEEcccCcCCCC-----CCH---------------------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSE-VTFIEALDQLMPG-----FDP--------------------------------- 310 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~~l~~-----~~~--------------------------------- 310 (551)
.+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+.+. +.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g~ 84 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGA 84 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCCC
Confidence 4799999999999999999999999 9999987643210 011
Q ss_pred -----------------------HHHHHHHHHHhCCCc-eEEEeceEEE--eCCCcEEEEEecccCCCCCeEEecCEEEE
Q 008850 311 -----------------------EIGKLAQRVLINPRK-IDYHTGVFAT--KDGKPVTIELIDAKTKEPKDTLEVDAALI 364 (551)
Q Consensus 311 -----------------------~~~~~~~~~l~~~~g-i~~~~~~~~~--~~~~~~~v~~~~g~~~~~~~~i~~D~vi~ 364 (551)
++.+.+.+.+.+..| ++++.++.++ ..++.+.+++.+.. ++...++.+|.||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~-~g~~~~~~ad~vV~ 163 (410)
T 3c96_A 85 TVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDG-HGKPQALGADVLVG 163 (410)
T ss_dssp EEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEET-TSCEEEEEESEEEE
T ss_pred EEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCC-CCCceEEecCEEEE
Confidence 222333344332113 5788887776 22455667776510 01225789999999
Q ss_pred eecCCCCC
Q 008850 365 ATGRAPFT 372 (551)
Q Consensus 365 a~G~~p~~ 372 (551)
|.|.....
T Consensus 164 AdG~~S~v 171 (410)
T 3c96_A 164 ADGIHSAV 171 (410)
T ss_dssp CCCTTCHH
T ss_pred CCCccchh
Confidence 99986543
No 337
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.90 E-value=0.0026 Score=64.33 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=67.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC--------------------C----------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP--------------------G---------------------- 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~---------------------- 307 (551)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 3699999999999999999999999999998753210 0
Q ss_pred -CC--------------HHHHHHHHHHHhCCCceEEEeceEEE---eCCCcEE-EEEecccCCCCCeEEecCEEEEeecC
Q 008850 308 -FD--------------PEIGKLAQRVLINPRKIDYHTGVFAT---KDGKPVT-IELIDAKTKEPKDTLEVDAALIATGR 368 (551)
Q Consensus 308 -~~--------------~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~~~-v~~~~g~~~~~~~~i~~D~vi~a~G~ 368 (551)
++ ..+...+.+.+++ .|++++.++.+. .+++.+. |++.+. ++..++.+|.||.|.|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~~~~~v~gv~~~~~---~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAK-AGADVWVKSPALGVIKENGKVAGAKIRHN---NEIVDVRAKMVIAADGF 160 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHH-HTCEEESSCCEEEEEEETTEEEEEEEEET---TEEEEEEEEEEEECCCT
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHh-CCCEEEECCEEEEEEEeCCEEEEEEEEEC---CeEEEEEcCEEEECCCc
Confidence 00 0123445555554 689999887766 3344443 666432 12368999999999997
Q ss_pred CC
Q 008850 369 AP 370 (551)
Q Consensus 369 ~p 370 (551)
..
T Consensus 161 ~s 162 (397)
T 3cgv_A 161 ES 162 (397)
T ss_dssp TC
T ss_pred ch
Confidence 65
No 338
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.89 E-value=0.0054 Score=64.56 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=67.1
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC--------C----------C------------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM--------P----------G------------------------ 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------~----------~------------------------ 307 (551)
..|+|||+|+.|+-+|..|++.|.+|+|+++.+... + .
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 479999999999999999999999999999875100 0 0
Q ss_pred --------------------CC-HHHHHHHHHHHhCCCceEEEeceEEE---eCCCc-EEEEEecccCCCCCeEEecCEE
Q 008850 308 --------------------FD-PEIGKLAQRVLINPRKIDYHTGVFAT---KDGKP-VTIELIDAKTKEPKDTLEVDAA 362 (551)
Q Consensus 308 --------------------~~-~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~~~-~~v~~~~g~~~~~~~~i~~D~v 362 (551)
++ ..+.+.+.+.+++ .|++++.++.++ .+++. ..+++.+. +++..++.+|.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~--dG~~~~i~ad~V 164 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSER-KGVDVRERHEVIDVLFEGERAVGVRYRNT--EGVELMAHARFI 164 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEETTEEEEEEEECS--SSCEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEECCEEEEEEEEeC--CCCEEEEEcCEE
Confidence 00 1233445555554 789999998776 33332 23555431 112247999999
Q ss_pred EEeecCCCC
Q 008850 363 LIATGRAPF 371 (551)
Q Consensus 363 i~a~G~~p~ 371 (551)
|.|+|....
T Consensus 165 I~AdG~~S~ 173 (512)
T 3e1t_A 165 VDASGNRTR 173 (512)
T ss_dssp EECCCTTCS
T ss_pred EECCCcchH
Confidence 999998643
No 339
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.81 E-value=0.0041 Score=70.60 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=66.8
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC----C--C--C----CHHHHHHHHHHHhCCCceEEEeceEEE--
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM----P--G--F----DPEIGKLAQRVLINPRKIDYHTGVFAT-- 335 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l----~--~--~----~~~~~~~~~~~l~~~~gi~~~~~~~~~-- 335 (551)
.+|+|||+|+.|+..|..+++.|.+|+++++.+.+. . . + ..+....+.+.+.+..+|+++.+..+.
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 579999999999999999999999999999876442 0 0 1 122333334444442489999987776
Q ss_pred eCCCcE-EEEEecc-cC--------CCCCeEEecCEEEEeecCCCCCC
Q 008850 336 KDGKPV-TIELIDA-KT--------KEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 336 ~~~~~~-~v~~~~g-~~--------~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
...... .++.... .. .+...++.+|.||+|||..|...
T Consensus 209 ~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~ 256 (965)
T 2gag_A 209 YDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPI 256 (965)
T ss_dssp ETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCC
T ss_pred ecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCC
Confidence 222211 1111110 00 01123689999999999987653
No 340
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.75 E-value=0.0065 Score=66.45 Aligned_cols=34 Identities=29% Similarity=0.223 Sum_probs=31.4
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
...|+|||+|..|+-.|..|++.|.+|+|+++.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3679999999999999999999999999999864
No 341
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.72 E-value=0.00085 Score=71.50 Aligned_cols=34 Identities=29% Similarity=0.437 Sum_probs=31.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK-GLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~-g~~V~liE~~ 133 (551)
..||+||||||.||+.+|.+|.+. +.+|+|||+.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG 52 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESG 52 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSS
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecC
Confidence 359999999999999999999975 7999999983
No 342
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.68 E-value=0.02 Score=56.05 Aligned_cols=162 Identities=16% Similarity=0.101 Sum_probs=92.6
Q ss_pred ceEEEECCChhHHHHHHHHHhC--CCeEEEEcccCcCCCC--------------------------------------CC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTAL--GSEVTFIEALDQLMPG--------------------------------------FD 309 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~--------------------------------------~~ 309 (551)
..|+|||+|+.|+..|..|++. |.+|+++++.+.+... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4799999999999999999998 9999999986543210 01
Q ss_pred HHHHHHHHHHHhCCCceEEEeceEEE---eC-----C--CcEEEEEeccc--------CCCCCeEEec------------
Q 008850 310 PEIGKLAQRVLINPRKIDYHTGVFAT---KD-----G--KPVTIELIDAK--------TKEPKDTLEV------------ 359 (551)
Q Consensus 310 ~~~~~~~~~~l~~~~gi~~~~~~~~~---~~-----~--~~~~v~~~~g~--------~~~~~~~i~~------------ 359 (551)
.++...+.+.+.+..||+++.+..+. .+ + ....+.+.... ...+...+.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 22334444545443599999998776 22 2 33344442110 0112357889
Q ss_pred ---CEEEEeecCCCCCC-CCCCcccccccC---CCc--e--------eeCCCCccccCCCCCCCcEEEecCCC----CCC
Q 008850 360 ---DAALIATGRAPFTN-GLGLENINVVTQ---RGF--V--------PVDERMRVIDANGNLVPHLYCIGDAN----GKM 418 (551)
Q Consensus 360 ---D~vi~a~G~~p~~~-~l~l~~~~l~~~---~G~--i--------~Vd~~~~~~~~~~t~~~~IyA~GD~~----~~~ 418 (551)
|.||.|+|...... ++......+... .|- . .|+..... +-+|++|++|-.. +.+
T Consensus 226 ~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~ 300 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAY-----AGVDNMYFAGMEVAELDGLN 300 (326)
T ss_dssp TTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEEC-----TTSTTEEECTHHHHHHHTCC
T ss_pred ccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCc-----cccCCEEECChHHHHhcCCC
Confidence 99999999875443 221000000000 010 0 11111110 2689999999874 333
Q ss_pred C---cHHHHHHHHHHHHHHHc
Q 008850 419 M---LAHAASAQGISVVEQVT 436 (551)
Q Consensus 419 ~---~~~~A~~~g~~aa~~i~ 436 (551)
+ ..-.-+..|+.||+.|+
T Consensus 301 r~g~~fg~m~~sg~~~a~~~~ 321 (326)
T 2gjc_A 301 RMGPTFGAMALSGVHAAEQIL 321 (326)
T ss_dssp BCCSCCHHHHHHHHHHHHHHH
T ss_pred CCChhhhhhhhhhHHHHHHHH
Confidence 2 23334567888887775
No 343
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=96.65 E-value=0.0072 Score=64.67 Aligned_cols=101 Identities=17% Similarity=0.118 Sum_probs=68.3
Q ss_pred ceEEEECCChhHHHHHHHHHhC------CCeEEEEcccCcCCCC------------------------------------
Q 008850 270 DWIAIVGSGYIGLEFSDVYTAL------GSEVTFIEALDQLMPG------------------------------------ 307 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------------------------------------ 307 (551)
-.|+|||+|+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4699999999999999999998 9999999986432100
Q ss_pred ---------C---C--------------HHHHHHHHHHHhCCCceEEEeceEEE---eCC-C-cEEEEEecc---cCCC-
Q 008850 308 ---------F---D--------------PEIGKLAQRVLINPRKIDYHTGVFAT---KDG-K-PVTIELIDA---KTKE- 352 (551)
Q Consensus 308 ---------~---~--------------~~~~~~~~~~l~~~~gi~~~~~~~~~---~~~-~-~~~v~~~~g---~~~~- 352 (551)
+ + .++.+.+.+.+++ .||+++.+..+. .++ . ...|.+.+. ..++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~ 194 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEA-LGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAP 194 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHH-TTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHH-cCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCc
Confidence 0 0 0334455666665 699999998776 232 2 334666530 0010
Q ss_pred -----CCeEEecCEEEEeecCCCC
Q 008850 353 -----PKDTLEVDAALIATGRAPF 371 (551)
Q Consensus 353 -----~~~~i~~D~vi~a~G~~p~ 371 (551)
++.++.+|.||.|.|....
T Consensus 195 ~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 195 KTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEEECCCEEECSEEEECCCTTCH
T ss_pred ccccCCceEEECCEEEEeeCCCch
Confidence 1257999999999997653
No 344
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.63 E-value=0.0014 Score=69.00 Aligned_cols=35 Identities=34% Similarity=0.503 Sum_probs=32.4
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 99 SFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 99 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..++|++|||+|++|+.+|.+|.+.|.+|+|||+.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 43 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMG 43 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 34699999999999999999999999999999983
No 345
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.63 E-value=0.013 Score=57.70 Aligned_cols=160 Identities=16% Similarity=0.166 Sum_probs=92.6
Q ss_pred ceEEEECCChhHHHHHHHHHhC--CCeEEEEcccCcCCCC---------------------------C-----------C
Q 008850 270 DWIAIVGSGYIGLEFSDVYTAL--GSEVTFIEALDQLMPG---------------------------F-----------D 309 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~---------------------------~-----------~ 309 (551)
..|+|||+|+.|+.+|..|++. |.+|+++++.+.+... + .
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 4699999999999999999997 9999999987543200 0 1
Q ss_pred HHHHHHHHHHHhCCCceEEEeceEEE----eC-----------------C--CcEEEEEe------cccC--CCCCeEEe
Q 008850 310 PEIGKLAQRVLINPRKIDYHTGVFAT----KD-----------------G--KPVTIELI------DAKT--KEPKDTLE 358 (551)
Q Consensus 310 ~~~~~~~~~~l~~~~gi~~~~~~~~~----~~-----------------~--~~~~v~~~------~g~~--~~~~~~i~ 358 (551)
.++.+.+.+.+.+..|++++.+..+. .+ + ....+.+. ++.. ..+..++.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 22334444555543599999998765 22 1 22233332 1100 01235799
Q ss_pred cCEEEEeecCCCCCC-CCC--Cccccccc-CCCc----------eeeCCCCccccCCCCCCCcEEEecCCC----CCC--
Q 008850 359 VDAALIATGRAPFTN-GLG--LENINVVT-QRGF----------VPVDERMRVIDANGNLVPHLYCIGDAN----GKM-- 418 (551)
Q Consensus 359 ~D~vi~a~G~~p~~~-~l~--l~~~~l~~-~~G~----------i~Vd~~~~~~~~~~t~~~~IyA~GD~~----~~~-- 418 (551)
++.||.|+|.....- ++. +...++.. -.|. ..|+... .-+||+|++|=.+ +.|
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~-------~v~~gl~~~gm~~~~~~g~~rm 312 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTR-------EIVPGLIVGGMELSEIDGANRM 312 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCE-------EEETTEEECGGGHHHHHTCEEC
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCc-------eEcCCEEEechhhHhhcCCCCC
Confidence 999999999875521 110 01111110 0111 1122222 2479999999764 222
Q ss_pred -CcHHHHHHHHHHHHHHHc
Q 008850 419 -MLAHAASAQGISVVEQVT 436 (551)
Q Consensus 419 -~~~~~A~~~g~~aa~~i~ 436 (551)
+....-+..|+.||+.|+
T Consensus 313 gp~fg~m~~sg~~~a~~~~ 331 (344)
T 3jsk_A 313 GPTFGAMALSGVKAAHEAI 331 (344)
T ss_dssp CSCCHHHHHHHHHHHHHHH
T ss_pred CcccceeeecCHHHHHHHH
Confidence 223334567888887775
No 346
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.60 E-value=0.0014 Score=69.00 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+|++|||+|++|+.+|.+|.+.|++|+|||+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 37 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMG 37 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3589999999999999999999999999999994
No 347
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.57 E-value=0.012 Score=59.61 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=30.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999764
No 348
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.52 E-value=0.0025 Score=68.16 Aligned_cols=41 Identities=24% Similarity=0.443 Sum_probs=38.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCcEEEeeC-CccCcccc
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG-DVVGGTCV 140 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~-~~~GG~~~ 140 (551)
++|||+|||+|..|...|..|++.|.+|++||| +.+||.|.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 469999999999999999999999999999999 88999765
No 349
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.51 E-value=0.0053 Score=61.55 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=30.2
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
.+.|+|||+|.+|+-.|..|+ .|.+|+++++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 478999999999999999999 599999999875
No 350
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.50 E-value=0.001 Score=70.69 Aligned_cols=33 Identities=27% Similarity=0.574 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHHH-cCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVE-KGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~-~g~~V~liE~~ 133 (551)
.||+||||||.||+.+|.+|.+ .+++|+|||+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG 35 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAG 35 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSS
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecC
Confidence 4899999999999999999998 68999999983
No 351
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.47 E-value=0.0065 Score=62.74 Aligned_cols=129 Identities=19% Similarity=0.174 Sum_probs=78.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
..+|.|||.|.+|+++|..|+++|++|++.|....- .
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~-----------------------------------------~-- 45 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD-----------------------------------------E-- 45 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG-----------------------------------------G--
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc-----------------------------------------C--
Confidence 358999999999999999999999999999973200 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEE-eCeEEEeCCCCCCCCCCcc--CCCceee
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVT-AKDIIIATGSVPFVPKGIE--VDGKTVI 257 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~-~d~lVlAtG~~p~~p~~~~--~~~~~v~ 257 (551)
.. ....++..|+++..|.. . .+ ..-. +|.||+++|..+..|.... ..+..++
T Consensus 46 -----------~~----~~~~L~~~gi~~~~g~~----~-----~~-~~~~~~d~vv~spgi~~~~p~~~~a~~~gi~v~ 100 (451)
T 3lk7_A 46 -----------NP----TAQSLLEEGIKVVCGSH----P-----LE-LLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVL 100 (451)
T ss_dssp -----------CH----HHHHHHHTTCEEEESCC----C-----GG-GGGSCEEEEEECTTSCTTSHHHHHHHHTTCCEE
T ss_pred -----------Ch----HHHHHHhCCCEEEECCC----h-----HH-hhcCCCCEEEECCcCCCCChhHHHHHHCCCcEE
Confidence 00 01234456888876641 0 00 0012 7999999998776664322 2334455
Q ss_pred cchhhhccccCCceEEEECC-Chh--HHHHHHHHHhCCCeEEE
Q 008850 258 TSDHALKLEFVPDWIAIVGS-GYI--GLEFSDVYTALGSEVTF 297 (551)
Q Consensus 258 ~~~~~~~~~~~~k~v~VvG~-G~~--g~e~A~~l~~~g~~Vtl 297 (551)
+-.++.......+.|.|-|. |-+ .--++..|...|.++.+
T Consensus 101 ~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~ 143 (451)
T 3lk7_A 101 TEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLL 143 (451)
T ss_dssp CHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred eHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 44443322222355666664 333 34456677777877644
No 352
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.41 E-value=0.0017 Score=67.21 Aligned_cols=32 Identities=31% Similarity=0.442 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
++|+|+|+|--|...|..|.+.|++|++||++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 48999999999999999999999999999974
No 353
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.38 E-value=0.0024 Score=68.35 Aligned_cols=34 Identities=35% Similarity=0.506 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHHHH-cCCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVE-KGLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~-~g~~V~liE~~ 133 (551)
..||++|||+|++|+.+|.+|.+ .|++|+|||+.
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g 57 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKG 57 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecC
Confidence 46999999999999999999999 79999999984
No 354
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.30 E-value=0.0023 Score=67.91 Aligned_cols=34 Identities=26% Similarity=0.566 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CCcEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEK-GLKTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~-g~~V~liE~~ 133 (551)
..+|++|||+|++|+.+|.+|.+. |.+|+|||+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g 46 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAG 46 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 459999999999999999999998 8999999994
No 355
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.23 E-value=0.026 Score=59.66 Aligned_cols=34 Identities=26% Similarity=0.319 Sum_probs=30.9
Q ss_pred CceEEEECCChhHHHHHHHHHh---CCCeEEEEcccC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTA---LGSEVTFIEALD 302 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~ 302 (551)
..+|+|||||..|+-+|..|++ .|.+|+|+++.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 3689999999999999999999 999999998743
No 356
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.18 E-value=0.025 Score=59.37 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=30.7
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
-.|+|||+|..|+-.|..+++.|.+|+++++.+.
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~ 75 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTSG 75 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3699999999999999999999999999987654
No 357
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.13 E-value=0.024 Score=58.05 Aligned_cols=33 Identities=24% Similarity=0.301 Sum_probs=30.3
Q ss_pred ceEEEECCChhHHHHHHHHHhCCC-eEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGS-EVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~ 302 (551)
..|+|||+|..|+-.|..|++.|. +|+++++.+
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 479999999999999999999999 999998754
No 358
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.11 E-value=0.0047 Score=58.21 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.6
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
.|+|||+|++|+-+|..|++.|.+|+|+++++.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999987654
No 359
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.10 E-value=0.019 Score=60.90 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=31.1
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4799999999999999999999999999997653
No 360
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.08 E-value=0.016 Score=58.81 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=29.9
Q ss_pred ceEEEECCChhHHHHHHHHHhC--CCeEEEEccc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTAL--GSEVTFIEAL 301 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~--g~~Vtlv~~~ 301 (551)
..|+|||+|.+|+-+|..|++. |.+|+++++.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 4799999999999999999999 9999999875
No 361
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.07 E-value=0.028 Score=58.86 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=30.2
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 369999999999999999999999999998753
No 362
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.03 E-value=0.024 Score=63.42 Aligned_cols=33 Identities=24% Similarity=0.468 Sum_probs=30.6
Q ss_pred ceEEEECCChhHHHHHHHHHhCCC-eEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGS-EVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~ 302 (551)
..|+|||+|.+|+-+|..|++.|. +|+++++.+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~ 38 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 38 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 479999999999999999999998 999999865
No 363
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.90 E-value=0.0063 Score=62.65 Aligned_cols=31 Identities=19% Similarity=0.482 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
.+|+|||.|.+|+++|..|.++|++|+++|.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~ 36 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDT 36 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEES
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEEC
Confidence 4799999999999999999999999999997
No 364
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=95.90 E-value=0.027 Score=59.80 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=30.6
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
.-.|+|||||..|+-+|..|++.|.+|+++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 357999999999999999999999999999875
No 365
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.63 E-value=0.044 Score=59.22 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.4
Q ss_pred ceEEEECCChhHHHHHHHHHh-CCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA-LGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~ 302 (551)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 469999999999999999999 999999998764
No 366
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.44 E-value=0.057 Score=55.97 Aligned_cols=31 Identities=35% Similarity=0.467 Sum_probs=29.0
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
.|+|||+|..|+-.|..|++.|.+|+++++.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3899999999999999999999999999876
No 367
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.40 E-value=0.049 Score=53.49 Aligned_cols=128 Identities=20% Similarity=0.219 Sum_probs=76.5
Q ss_pred ccEEEECCChHHHH-HHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHG-AALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~-aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|.|||.|.+|++ +|..|.++|++|++.|+... | .
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~----------~--------------------------------~- 41 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY----------P--------------------------------P- 41 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC----------T--------------------------------T-
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC----------c--------------------------------H-
Confidence 47999999999997 78888999999999997320 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCCcc--CCCceeec
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIE--VDGKTVIT 258 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~--~~~~~v~~ 258 (551)
....++..|+++..|. +... +.. ..+|.||+.+|..|..|.... ..+..+++
T Consensus 42 -----------------~~~~L~~~gi~v~~g~----~~~~--l~~---~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 42 -----------------MSTQLEALGIDVYEGF----DAAQ--LDE---FKADVYVIGNVAKRGMDVVEAILNLGLPYIS 95 (326)
T ss_dssp -----------------HHHHHHHTTCEEEESC----CGGG--GGS---CCCSEEEECTTCCTTCHHHHHHHHTTCCEEE
T ss_pred -----------------HHHHHHhCCCEEECCC----CHHH--cCC---CCCCEEEECCCcCCCCHHHHHHHHcCCcEEe
Confidence 0112344688887653 1100 000 148999999998776664322 23444554
Q ss_pred chhhhc--cccCCceEEEECC-Chh--HHHHHHHHHhCCCeEEEE
Q 008850 259 SDHALK--LEFVPDWIAIVGS-GYI--GLEFSDVYTALGSEVTFI 298 (551)
Q Consensus 259 ~~~~~~--~~~~~k~v~VvG~-G~~--g~e~A~~l~~~g~~Vtlv 298 (551)
-.++.. +....+.|.|-|. |-+ .--++..|...|.++.++
T Consensus 96 ~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~~~~ 140 (326)
T 3eag_A 96 GPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFL 140 (326)
T ss_dssp HHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCCCceEE
Confidence 433322 1122244666664 433 344567777788877543
No 368
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.35 E-value=0.01 Score=62.16 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=30.8
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
|+|+|||+|..|+-.|..|++.|.+|+|+++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 78999999999999999999999999999987643
No 369
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.27 E-value=0.11 Score=54.21 Aligned_cols=102 Identities=17% Similarity=0.133 Sum_probs=67.9
Q ss_pred eEEEECCChhHHHHHHHHHhCC--------------CeEEEEcccCcC-------CCC--------------------C-
Q 008850 271 WIAIVGSGYIGLEFSDVYTALG--------------SEVTFIEALDQL-------MPG--------------------F- 308 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~-------l~~--------------------~- 308 (551)
.|+|||+|++|+-+|..|.+.| ..+.++++.+.+ ++. +
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999999988642 346677765532 111 0
Q ss_pred -----------------------CHHHHHHHHHHHhCCCceEEEeceEEE----eCC-------CcEEEEEecccCCCCC
Q 008850 309 -----------------------DPEIGKLAQRVLINPRKIDYHTGVFAT----KDG-------KPVTIELIDAKTKEPK 354 (551)
Q Consensus 309 -----------------------~~~~~~~~~~~l~~~~gi~~~~~~~~~----~~~-------~~~~v~~~~g~~~~~~ 354 (551)
-.++.++++...++ .+..+.+++.++ .+. +...|+..++.+ +..
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~-~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~-g~~ 198 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQ-FSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET-GEI 198 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHT-TGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTT-CCE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHH-cCCceEcceEEEeeccccccccccccceEEEEEecCCC-ceE
Confidence 12455666666655 666777777766 111 236677766533 334
Q ss_pred eEEecCEEEEeecCCCCCCC
Q 008850 355 DTLEVDAALIATGRAPFTNG 374 (551)
Q Consensus 355 ~~i~~D~vi~a~G~~p~~~~ 374 (551)
+++.++.|++|+|..|+...
T Consensus 199 ~~~~ar~vVlatG~~P~iP~ 218 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPS 218 (501)
T ss_dssp EEEEEEEEEECCCCEECCCT
T ss_pred EEEEeCEEEECcCCCCCCCC
Confidence 57899999999999887653
No 370
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.18 E-value=0.026 Score=47.78 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
+-+|+|||.|.-|...|..|.+.|++|+++|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 358999999999999999999999999999984
No 371
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.88 E-value=0.12 Score=55.21 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=29.4
Q ss_pred eEEEECCChhHHHHHHHHHhCC--CeEEEEcccC
Q 008850 271 WIAIVGSGYIGLEFSDVYTALG--SEVTFIEALD 302 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~ 302 (551)
.|+|||+|..|+-.|..|++.| .+|+++++.+
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 5999999999999999999999 9999998753
No 372
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.83 E-value=0.035 Score=51.04 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=51.6
Q ss_pred cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEEeCCCcEEEEEe
Q 008850 267 FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFATKDGKPVTIELI 346 (551)
Q Consensus 267 ~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~v~~~ 346 (551)
-.+++|+|||+|.+|..-+..|.+.|.+|+++.+. +.+++. +..++ .+|+++... +.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~------~~~~l~----~l~~~-~~i~~i~~~------------~~ 85 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT------VSAEIN----EWEAK-GQLRVKRKK------------VG 85 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS------CCHHHH----HHHHT-TSCEEECSC------------CC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC------CCHHHH----HHHHc-CCcEEEECC------------CC
Confidence 34799999999999999999999999999999753 244433 33333 456654331 00
Q ss_pred cccCCCCCeEEecCEEEEeecCCC
Q 008850 347 DAKTKEPKDTLEVDAALIATGRAP 370 (551)
Q Consensus 347 ~g~~~~~~~~i~~D~vi~a~G~~p 370 (551)
.. ..-.+|+||.|||...
T Consensus 86 ~~------dL~~adLVIaAT~d~~ 103 (223)
T 3dfz_A 86 EE------DLLNVFFIVVATNDQA 103 (223)
T ss_dssp GG------GSSSCSEEEECCCCTH
T ss_pred Hh------HhCCCCEEEECCCCHH
Confidence 10 1235899999998654
No 373
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=94.72 E-value=0.13 Score=55.84 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=30.8
Q ss_pred ceEEEECCChhHHHHHHHHHh-----CCCeEEEEcccCc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA-----LGSEVTFIEALDQ 303 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~-----~g~~Vtlv~~~~~ 303 (551)
-.|+|||+|+.|+-+|..|++ .|.+|+|+++.+.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 369999999999999999999 9999999997643
No 374
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.63 E-value=0.024 Score=58.04 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=31.5
Q ss_pred cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 267 FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 267 ~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
+..++|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 345789999999999999999999999999999875
No 375
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.60 E-value=0.036 Score=46.83 Aligned_cols=32 Identities=25% Similarity=0.487 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|+|+|.-|...|..|.+.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 47999999999999999999999999999984
No 376
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.49 E-value=0.043 Score=47.33 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|||+|.-|...|..|.+.|++|+++|++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 58999999999999999999999999999983
No 377
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.33 E-value=0.047 Score=46.89 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|+|+|..|...+..|.+.|++|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 47999999999999999999999999999983
No 378
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.14 E-value=0.048 Score=45.67 Aligned_cols=32 Identities=34% Similarity=0.369 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|||+|.-|...|..|.+.|++|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 47999999999999999999999999999974
No 379
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.08 E-value=0.048 Score=55.48 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=31.9
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
++|+|||+|..|+-.|..|++.|.+|+++++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 47999999999999999999999999999987653
No 380
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.02 E-value=0.044 Score=57.21 Aligned_cols=39 Identities=33% Similarity=0.486 Sum_probs=35.0
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP 306 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 306 (551)
.+++|+|||+|.+|+..|..|.+.|.+|+++++++++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357899999999999999999999999999998876644
No 381
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.95 E-value=0.055 Score=43.74 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcC-CcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKG-LKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g-~~V~liE~~ 133 (551)
.+|+|+|+|..|...+..|.+.| ++|+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 57999999999999999999999 899999974
No 382
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.76 E-value=0.059 Score=54.81 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=31.7
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
++|+|||+|..|+-.|..|++.|.+|+++++++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 36999999999999999999999999999987543
No 383
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.72 E-value=0.082 Score=45.49 Aligned_cols=37 Identities=19% Similarity=0.387 Sum_probs=33.0
Q ss_pred cCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 267 FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 267 ~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
..+++++|+|+|.+|..++..|.+.|.+|+++++.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3468999999999999999999999999999987653
No 384
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.46 E-value=0.077 Score=53.05 Aligned_cols=37 Identities=41% Similarity=0.622 Sum_probs=33.4
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEccc-CcC
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL-DQL 304 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~-~~~ 304 (551)
.+.+|+|||+|.+|+-.|..|.+.|.+|+|++++ +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3578999999999999999999999999999988 543
No 385
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.36 E-value=0.07 Score=55.22 Aligned_cols=35 Identities=23% Similarity=0.380 Sum_probs=32.3
Q ss_pred ceEEEECCChhHHHHHHHHHhCCC--eEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGS--EVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~ 304 (551)
++|+|||+|.+|+-.|..|++.|. +|+++++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999987654
No 386
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.36 E-value=0.063 Score=53.85 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=31.8
Q ss_pred ceEEEECCChhHHHHHHHHHhC--CCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTAL--GSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~ 304 (551)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3699999999999999999999 9999999987654
No 387
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.21 E-value=0.086 Score=51.72 Aligned_cols=77 Identities=19% Similarity=0.109 Sum_probs=55.1
Q ss_pred CceEEEECCChhHHH-HHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEEeCCCcEEEEEec
Q 008850 269 PDWIAIVGSGYIGLE-FSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFATKDGKPVTIELID 347 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~v~~~~ 347 (551)
.+++.|||-|.+|+. +|..|.++|.+|++.++.+.. + ..+.|++ .||+++.+.. ..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~-----~-----~~~~L~~-~gi~v~~g~~----~~-------- 60 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP-----P-----MSTQLEA-LGIDVYEGFD----AA-------- 60 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT-----T-----HHHHHHH-TTCEEEESCC----GG--------
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc-----H-----HHHHHHh-CCCEEECCCC----HH--------
Confidence 589999999999996 899999999999999976531 1 1233444 6888775521 00
Q ss_pred ccCCCCCeE-EecCEEEEeecCCCCCCC
Q 008850 348 AKTKEPKDT-LEVDAALIATGRAPFTNG 374 (551)
Q Consensus 348 g~~~~~~~~-i~~D~vi~a~G~~p~~~~ 374 (551)
... ..+|.||+++|..|+.+.
T Consensus 61 ------~l~~~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 61 ------QLDEFKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp ------GGGSCCCSEEEECTTCCTTCHH
T ss_pred ------HcCCCCCCEEEECCCcCCCCHH
Confidence 001 248999999999887653
No 388
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.20 E-value=0.093 Score=54.51 Aligned_cols=37 Identities=24% Similarity=0.248 Sum_probs=33.6
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM 305 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 305 (551)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+++-
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 4689999999999999999999999999999887643
No 389
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.17 E-value=0.077 Score=54.06 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=31.4
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
.|+|||+|..|+-.|..|++.|.+|+++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6999999999999999999999999999987654
No 390
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.13 E-value=0.17 Score=52.61 Aligned_cols=123 Identities=21% Similarity=0.271 Sum_probs=74.6
Q ss_pred ccEEEECCChHHHH-HHHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHG-AALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~-aA~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|.|||-|-+|++ +|..|.++|++|++.|... .
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~--------------------------------------------~- 57 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP--------------------------------------------N- 57 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC--------------------------------------------C-
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC--------------------------------------------C-
Confidence 58999999999997 6999999999999998631 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCCcc--CCCceeec
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIE--VDGKTVIT 258 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~--~~~~~v~~ 258 (551)
. ....++..|+++..|. +... + -.+|.||+.+|..+..|.... ..+..+++
T Consensus 58 -----------~-----~~~~l~~~gi~~~~g~----~~~~--~-----~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~ 110 (494)
T 4hv4_A 58 -----------S-----VTQHLTALGAQIYFHH----RPEN--V-----LDASVVVVSTAISADNPEIVAAREARIPVIR 110 (494)
T ss_dssp -----------H-----HHHHHHHTTCEEESSC----CGGG--G-----TTCSEEEECTTSCTTCHHHHHHHHTTCCEEE
T ss_pred -----------H-----HHHHHHHCCCEEECCC----CHHH--c-----CCCCEEEECCCCCCCCHHHHHHHHCCCCEEc
Confidence 0 0112345688887662 1110 1 138999999998766554322 23344554
Q ss_pred chhhhccccCC-ceEEEECC-Chh--HHHHHHHHHhCCCeEE
Q 008850 259 SDHALKLEFVP-DWIAIVGS-GYI--GLEFSDVYTALGSEVT 296 (551)
Q Consensus 259 ~~~~~~~~~~~-k~v~VvG~-G~~--g~e~A~~l~~~g~~Vt 296 (551)
--++....... +.|.|-|. |-+ .--++..|...|.+.+
T Consensus 111 ~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~ 152 (494)
T 4hv4_A 111 RAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLDPT 152 (494)
T ss_dssp HHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCCCCE
Confidence 44433222222 34666664 433 3445667777776533
No 391
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.08 E-value=0.084 Score=53.66 Aligned_cols=36 Identities=31% Similarity=0.454 Sum_probs=33.2
Q ss_pred CceEEEECCChhHHHHHHHHHhCC-CeEEEEcccCcC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALG-SEVTFIEALDQL 304 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 304 (551)
..+|+|||+|..|+-.|..|++.| .+|+++++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 468999999999999999999999 899999988765
No 392
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.05 E-value=0.18 Score=51.76 Aligned_cols=79 Identities=15% Similarity=0.097 Sum_probs=56.5
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEEeCCCcEEEEEec
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFATKDGKPVTIELID 347 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~v~~~~ 347 (551)
.+|+|.|||.|.+|+-+|..|.+.|.+|++.+.++.-. ++ ..+.|++ .||+++.+... . +
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~---~~-----~~~~L~~-~gi~~~~g~~~----~-------~ 67 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE---NP-----TAQSLLE-EGIKVVCGSHP----L-------E 67 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG---CH-----HHHHHHH-TTCEEEESCCC----G-------G
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC---Ch-----HHHHHHh-CCCEEEECCCh----H-------H
Confidence 47899999999999999999999999999998765210 11 2234554 68888766310 0 0
Q ss_pred ccCCCCCeEEe-cCEEEEeecCCCCCC
Q 008850 348 AKTKEPKDTLE-VDAALIATGRAPFTN 373 (551)
Q Consensus 348 g~~~~~~~~i~-~D~vi~a~G~~p~~~ 373 (551)
..-. +|.||+++|..|+.+
T Consensus 68 -------~~~~~~d~vv~spgi~~~~p 87 (451)
T 3lk7_A 68 -------LLDEDFCYMIKNPGIPYNNP 87 (451)
T ss_dssp -------GGGSCEEEEEECTTSCTTSH
T ss_pred -------hhcCCCCEEEECCcCCCCCh
Confidence 0012 799999999988765
No 393
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.01 E-value=0.086 Score=44.29 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|+|+|..|...|..|.+.|++|+++|+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999973
No 394
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=92.77 E-value=0.088 Score=55.23 Aligned_cols=36 Identities=25% Similarity=0.429 Sum_probs=32.8
Q ss_pred ceEEEECCChhHHHHHHHHHhCC-CeEEEEcccCcCC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALG-SEVTFIEALDQLM 305 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~l 305 (551)
.+|+|||+|.+|+-.|..|.+.| .+|+|+++++++.
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 58999999999999999999999 9999999877543
No 395
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.67 E-value=0.11 Score=51.73 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=30.7
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
+.|+|||+|..|++.|..+++.|.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999765
No 396
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.59 E-value=0.084 Score=55.12 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=31.5
Q ss_pred ceEEEECCChhHHHHHHHHHh-CCCeEEEEcccCcCC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA-LGSEVTFIEALDQLM 305 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~l 305 (551)
-.|+|||+|.+|+-.|..|++ .|.+|+|+++++++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 369999999999999999987 599999999877653
No 397
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.52 E-value=0.064 Score=55.27 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=32.5
Q ss_pred ceEEEECCChhHHHHHHHHHhCC------CeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALG------SEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g------~~Vtlv~~~~~~ 304 (551)
++|+|||+|.+|+-.|..|++.| .+|+++++++++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 68999999999999999999999 999999988655
No 398
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.41 E-value=0.11 Score=51.43 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=30.2
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
..|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 57999999999999999999999999999975
No 399
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.38 E-value=0.11 Score=54.63 Aligned_cols=35 Identities=26% Similarity=0.417 Sum_probs=32.6
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
.+|+|||+|..|+-.|..|++.|.+|+++++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 57999999999999999999999999999988765
No 400
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.31 E-value=0.11 Score=53.73 Aligned_cols=37 Identities=24% Similarity=0.396 Sum_probs=33.3
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM 305 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 305 (551)
..+|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLG 52 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 4689999999999999999999999999999987653
No 401
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.21 E-value=0.13 Score=47.17 Aligned_cols=33 Identities=9% Similarity=0.255 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
...|+|||||..|...+..|.+.|.+|+||++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999999999999863
No 402
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.17 E-value=0.13 Score=51.60 Aligned_cols=35 Identities=29% Similarity=0.492 Sum_probs=32.2
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
.+|+|||+|.+|+.+|..|.+.|.+|+++++++++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 47999999999999999999999999999987755
No 403
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.04 E-value=0.15 Score=45.21 Aligned_cols=32 Identities=28% Similarity=0.274 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHc-CCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK-GLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~-g~~V~liE~~ 133 (551)
.+|+|||+|.-|...|..|.+. |++|+++|++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 4799999999999999999999 9999999984
No 404
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.03 E-value=0.13 Score=53.04 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=33.8
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP 306 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 306 (551)
..|+|||+|..|+-.|..|++.|.+|+++++++++..
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 4799999999999999999999999999999887643
No 405
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.89 E-value=0.15 Score=53.06 Aligned_cols=37 Identities=27% Similarity=0.336 Sum_probs=33.7
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM 305 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 305 (551)
..+|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 4689999999999999999999999999999887653
No 406
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.70 E-value=0.16 Score=52.16 Aligned_cols=35 Identities=37% Similarity=0.469 Sum_probs=32.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
.+|+|||+|..|+-.|..|++.|.+|+++++++++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 57999999999999999999999999999987665
No 407
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.68 E-value=0.11 Score=49.38 Aligned_cols=31 Identities=19% Similarity=0.356 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
..|+|||||..|...+..|.+.|.+|+||++
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 5899999999999999999999999999997
No 408
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.54 E-value=0.2 Score=42.19 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.8
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
..++++|+|.|..|..+|..|.+.|.+|+++++.+
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34789999999999999999999999999999753
No 409
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=91.52 E-value=0.18 Score=50.85 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=32.7
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
..+++|||+|.+|+-+|..|++.|.+|+++++++++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 357999999999999999999999999999987654
No 410
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.41 E-value=0.15 Score=46.67 Aligned_cols=31 Identities=26% Similarity=0.292 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 103 DLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
+|+|||+|.-|...|..|.+.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6999999999999999999999999999984
No 411
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.37 E-value=0.17 Score=52.56 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=33.1
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM 305 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 305 (551)
.+|+|||+|..|+-.|..|.+.|.+|+++++++++-
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIG 75 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSB
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 589999999999999999999999999999887653
No 412
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.28 E-value=0.16 Score=50.84 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+|+|||+|..|+.+|..|+..|.+|+++|+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 358999999999999999999999999999973
No 413
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.21 E-value=0.24 Score=42.32 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=30.7
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999875
No 414
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=91.04 E-value=0.16 Score=49.53 Aligned_cols=36 Identities=28% Similarity=0.238 Sum_probs=31.2
Q ss_pred CceEEEECCChhHHHHHHHHHh--CCCeEEEEcccCcC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTA--LGSEVTFIEALDQL 304 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~ 304 (551)
...|+|||+|+.|+-.|..|++ .|.+|+++++.+.+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 3579999999999999999974 59999999987654
No 415
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.03 E-value=0.14 Score=50.54 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=29.7
Q ss_pred eEEEECCChhHHHHHHHHHhCC------CeEEEEcccC
Q 008850 271 WIAIVGSGYIGLEFSDVYTALG------SEVTFIEALD 302 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g------~~Vtlv~~~~ 302 (551)
.|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999764
No 416
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.95 E-value=0.2 Score=42.10 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=30.5
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
.++++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 368999999999999999999999999999874
No 417
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=90.94 E-value=0.17 Score=51.19 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=32.0
Q ss_pred ceEEEECCChhHHHHHHHHHhC-CCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTAL-GSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 304 (551)
.+|+|||+|.+|+-.|..|++. |.+|+++++++++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 5799999999999999999998 9999999987654
No 418
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.85 E-value=0.19 Score=51.95 Aligned_cols=35 Identities=29% Similarity=0.351 Sum_probs=32.1
Q ss_pred ceEEEECCChhHHHHHHHHHhCC--CeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALG--SEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~ 304 (551)
.+|+|||+|.+|+-.|..|++.| .+|+++++++++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 57999999999999999999999 999999987654
No 419
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.82 E-value=0.2 Score=40.24 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=30.2
Q ss_pred CceEEEECCChhHHHHHHHHHhCC-CeEEEEccc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALG-SEVTFIEAL 301 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~~ 301 (551)
.++++|+|+|.+|..++..|.+.| .+|+++.|.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 899999875
No 420
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.73 E-value=0.25 Score=41.11 Aligned_cols=32 Identities=22% Similarity=0.477 Sum_probs=29.7
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
.+++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 57999999999999999999999999999874
No 421
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.70 E-value=0.21 Score=49.55 Aligned_cols=33 Identities=15% Similarity=0.380 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-cEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~ 133 (551)
+.+|||+|+|.||+.+|..|...|. +|+++|+.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4699999999999999999999998 89999984
No 422
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=90.60 E-value=0.2 Score=49.90 Aligned_cols=34 Identities=29% Similarity=0.393 Sum_probs=31.2
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
+++|||+|..|+-.|..|++.|.+|+++++++++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999987654
No 423
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.54 E-value=0.27 Score=53.29 Aligned_cols=37 Identities=32% Similarity=0.523 Sum_probs=33.6
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
.+++|+|||+|..|+..|..|.+.|.+|+++++.+++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3579999999999999999999999999999987654
No 424
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=90.46 E-value=0.3 Score=54.26 Aligned_cols=38 Identities=32% Similarity=0.479 Sum_probs=34.2
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM 305 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 305 (551)
..++|+|||+|..|+..|..|.+.|.+|+++++.+++.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 35799999999999999999999999999999877653
No 425
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.43 E-value=0.2 Score=49.70 Aligned_cols=33 Identities=27% Similarity=0.308 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+|+|||+|..|+.+|..|+..|.+|+++|+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 358999999999999999999999999999973
No 426
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=90.27 E-value=0.24 Score=52.34 Aligned_cols=34 Identities=29% Similarity=0.350 Sum_probs=31.1
Q ss_pred CceEEEECCChhHHHHHHHHHh---CCCeEEEEcccC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTA---LGSEVTFIEALD 302 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~ 302 (551)
..+|+|||||..|+-+|..|++ .|.+|+|+++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 999999999753
No 427
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.04 E-value=0.23 Score=52.73 Aligned_cols=34 Identities=26% Similarity=0.279 Sum_probs=31.2
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
...|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4579999999999999999999999999999764
No 428
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.03 E-value=0.18 Score=52.61 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=29.4
Q ss_pred ceEEEECCChhHHHHHHHHHh---CCCeEEEEcccC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTA---LGSEVTFIEALD 302 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~ 302 (551)
.+|+|||||..|+-+|..|++ .|.+|+|+++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 579999999999999999999 999999998753
No 429
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.97 E-value=0.57 Score=45.53 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
.+|.|||+|.-|...|..|++.|++|+++ +
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~ 49 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-A 49 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-C
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-E
Confidence 58999999999999999999999999998 5
No 430
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.79 E-value=0.33 Score=46.40 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..+++.|++|+++|+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999974
No 431
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.76 E-value=0.32 Score=46.91 Aligned_cols=32 Identities=25% Similarity=0.460 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|++.|++|+++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 47999999999999999999999999999974
No 432
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.68 E-value=0.38 Score=47.13 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-cEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~ 133 (551)
.+|+|||+|.-|.+.|..|++.|+ +|+++|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998 99999973
No 433
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=89.62 E-value=0.26 Score=51.74 Aligned_cols=34 Identities=32% Similarity=0.351 Sum_probs=31.0
Q ss_pred CceEEEECCChhHHHHHHHHHh------------CCCeEEEEcccC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTA------------LGSEVTFIEALD 302 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~------------~g~~Vtlv~~~~ 302 (551)
..+|+|||||+.|+-+|..|++ .|.+|+|+++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4689999999999999999999 899999999753
No 434
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=89.57 E-value=0.93 Score=44.09 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=32.7
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
.++++.|||-|.+|..+|..+...|.+|+.+.+.+.
T Consensus 139 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 174 (324)
T 3hg7_A 139 KGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGR 174 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChH
Confidence 368999999999999999999999999999987653
No 435
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.38 E-value=0.31 Score=48.28 Aligned_cols=34 Identities=12% Similarity=0.328 Sum_probs=30.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC-cEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~ 133 (551)
.+.+|+|+|+|.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34699999999999999999999998 79999984
No 436
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=89.10 E-value=0.34 Score=50.28 Aligned_cols=36 Identities=31% Similarity=0.348 Sum_probs=32.4
Q ss_pred CceEEEECCChhHHHHHHHHHhCC-CeEEEEcccCcC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALG-SEVTFIEALDQL 304 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 304 (551)
..+|+|||+|.+|+-.|..|++.| .+|+++++++++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 468999999999999999999998 799999987654
No 437
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.08 E-value=0.3 Score=40.83 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=30.2
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999999864
No 438
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.02 E-value=0.27 Score=46.55 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=32.0
Q ss_pred cCCceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 267 FVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 267 ~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
-.+++|+|||+|.+|..-+..|.+.|.+|+++...
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 34799999999999999999999999999999854
No 439
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.98 E-value=0.37 Score=47.78 Aligned_cols=31 Identities=19% Similarity=0.445 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
.+|+|||||..|..++..++++|++|+++|.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4799999999999999999999999999997
No 440
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.91 E-value=0.36 Score=45.16 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-cEEEeeCCc
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGDV 134 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~~ 134 (551)
.+|+|||+|..|..+|..|++.|. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999997 899999854
No 441
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.89 E-value=0.33 Score=48.95 Aligned_cols=31 Identities=29% Similarity=0.363 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
.+|+|||+|.+|+.++..++..|.+|+++|+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~ 203 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDT 203 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 5899999999999999999999999999997
No 442
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=88.87 E-value=0.23 Score=50.79 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=29.6
Q ss_pred ceEEEECCChhHHHHHHHHHhCC-CeEEEEcc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALG-SEVTFIEA 300 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~ 300 (551)
..|+|||+|..|+-+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 443
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=88.83 E-value=0.38 Score=46.82 Aligned_cols=32 Identities=16% Similarity=0.312 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 48999999999999999999999999999874
No 444
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.62 E-value=0.5 Score=42.79 Aligned_cols=39 Identities=33% Similarity=0.467 Sum_probs=31.5
Q ss_pred cccCCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 265 LEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 265 ~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
.+....+|.|||.|..|.-+|..|.+.|.+|+++.|.+.
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 334467899999999999999999999999999987654
No 445
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.21 E-value=0.46 Score=49.40 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=53.9
Q ss_pred CCceEEEECCChhHHH-HHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEEeCCCcEEEEEe
Q 008850 268 VPDWIAIVGSGYIGLE-FSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFATKDGKPVTIELI 346 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~v~~~ 346 (551)
..|+|.|||-|-+|+- +|..|.+.|.+|+..+..+. + . .+.|++ .||+++.+.. ..
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~------~-~----~~~l~~-~gi~~~~g~~----~~------- 77 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN------S-V----TQHLTA-LGAQIYFHHR----PE------- 77 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC------H-H----HHHHHH-TTCEEESSCC----GG-------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC------H-H----HHHHHH-CCCEEECCCC----HH-------
Confidence 3589999999999996 89999999999999986532 2 1 234554 6888876521 00
Q ss_pred cccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 347 DAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 347 ~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
....+|.||+++|..|+.+
T Consensus 78 --------~~~~~d~vV~Spgi~~~~p 96 (494)
T 4hv4_A 78 --------NVLDASVVVVSTAISADNP 96 (494)
T ss_dssp --------GGTTCSEEEECTTSCTTCH
T ss_pred --------HcCCCCEEEECCCCCCCCH
Confidence 1124799999999887654
No 446
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=88.15 E-value=0.38 Score=51.81 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=37.3
Q ss_pred CCceeeCCCCcccc-----------CCCCCCCcEEEecCCCCC--CCcHHHHHHHHHHHHHHHc
Q 008850 386 RGFVPVDERMRVID-----------ANGNLVPHLYCIGDANGK--MMLAHAASAQGISVVEQVT 436 (551)
Q Consensus 386 ~G~i~Vd~~~~~~~-----------~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~ 436 (551)
.|.|.||+..|+.+ ..+|++||+||+|+|++. ..+...++.+|++++++++
T Consensus 401 ~gGi~~d~~~~vl~~~~~~~v~~~~~~~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa 464 (643)
T 1jnr_A 401 EAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAV 464 (643)
T ss_dssp CCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccceeecCccccccccccccccccccCCceeCCEEeeeccccccccccchhHHHHHHHHHHHHH
Confidence 34688886655532 113899999999999864 3466778888999888776
No 447
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.15 E-value=0.39 Score=48.11 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
..+|+|||+|.+|+.++..++..|.+|+++|+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~ 203 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDV 203 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 35899999999999999999999999999997
No 448
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.12 E-value=0.42 Score=47.21 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|.+.|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999873
No 449
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.07 E-value=0.42 Score=47.46 Aligned_cols=32 Identities=34% Similarity=0.458 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|+|+|.+|..++..|+..|.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999973
No 450
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.93 E-value=0.51 Score=45.90 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-cEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|++.|+ +|+++|++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 589999999999999999999998 99999973
No 451
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=87.90 E-value=0.49 Score=46.39 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
.+|.|||+|.-|...|..|.+.|++|+++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEC
Confidence 4899999999999999999999999999987
No 452
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=87.79 E-value=0.5 Score=48.63 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=33.5
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCCC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP 306 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 306 (551)
-.|+|||+|..|+-+|..|++.|.+|.++++++.+..
T Consensus 21 ~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 21 YDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 3799999999999999999999999999999876643
No 453
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=87.77 E-value=0.9 Score=44.02 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=33.2
Q ss_pred CCceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 268 VPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 268 ~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
.++++.|||-|.+|..+|..+...|.+|..+.+.+.-
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~ 174 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKS 174 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence 3689999999999999999999999999999877643
No 454
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.58 E-value=0.39 Score=42.32 Aligned_cols=34 Identities=29% Similarity=0.242 Sum_probs=30.9
Q ss_pred CceEEEECCChhHHHHHHHHHhC-CCeEEEEcccC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTAL-GSEVTFIEALD 302 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 302 (551)
+++++|+|.|.+|..+|..|.+. |.+|+++++.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 56899999999999999999999 99999998753
No 455
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.58 E-value=0.52 Score=47.69 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|||.|..|...|..|.+.|++|++||++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 47999999999999999999999999999974
No 456
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.56 E-value=0.49 Score=45.90 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
-+|.|||+|.-|..-|..++..|++|+|+|.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 4799999999999999999999999999997
No 457
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.49 E-value=0.3 Score=47.38 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=31.5
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
.++|+|||+|..|..+|..++..|.+|++++..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36899999999999999999999999999987653
No 458
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.41 E-value=0.46 Score=46.09 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999874
No 459
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=87.25 E-value=0.48 Score=52.08 Aligned_cols=36 Identities=31% Similarity=0.490 Sum_probs=32.7
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
..+|+|||+|..|+-.|..|++.|.+|+++++.+++
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 468999999999999999999999999999986644
No 460
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.24 E-value=0.52 Score=46.64 Aligned_cols=33 Identities=30% Similarity=0.375 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+|.|||+|.-|.+.|..|++.|++|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 358999999999999999999999999999874
No 461
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.22 E-value=0.62 Score=45.38 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-cEEEeeC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL-KTAIIEG 132 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~ 132 (551)
.+|.|||+|..|...|..|+..|+ +|+++|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 589999999999999999999998 9999997
No 462
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.17 E-value=0.53 Score=45.71 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--cEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL--KTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~~ 133 (551)
.+|+|||+|.-|...|..|.+.|+ +|+++|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999999999999999999998 99999974
No 463
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.07 E-value=0.54 Score=45.75 Aligned_cols=32 Identities=22% Similarity=0.452 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..+++.|++|+++|++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999974
No 464
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.05 E-value=0.52 Score=45.43 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|.+.|++|+++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999999874
No 465
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.91 E-value=0.55 Score=45.65 Aligned_cols=38 Identities=32% Similarity=0.443 Sum_probs=29.3
Q ss_pred hccccCCceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 263 LKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 263 ~~~~~~~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
.++....++|+|||+|..|.-+|..|++.|.+|+++ ++
T Consensus 13 ~~~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 13 ENLYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -------CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred hhhhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 344455689999999999999999999999999999 54
No 466
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=86.84 E-value=0.56 Score=47.79 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=32.8
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcCC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM 305 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 305 (551)
.+|+|||+|..|+-.|..|++.|.+|+++++++.+.
T Consensus 7 ~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 7 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 479999999999999999999999999999887654
No 467
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.72 E-value=0.61 Score=47.37 Aligned_cols=32 Identities=19% Similarity=0.095 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEG 132 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~ 132 (551)
+.+|.|||.|.-||..|..+++.|++|+.+|-
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Di 52 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDV 52 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEEC
Confidence 35899999999999999999999999999996
No 468
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.66 E-value=0.71 Score=44.75 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=30.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC-cEEEeeCC
Q 008850 100 FDYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGD 133 (551)
Q Consensus 100 ~~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~ 133 (551)
...+|.|||+|.-|.+.|..|++.|+ +|+++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34689999999999999999999999 99999973
No 469
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=86.54 E-value=0.51 Score=45.35 Aligned_cols=33 Identities=21% Similarity=0.092 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+|.|||.|.-|...|..|++.|++|+++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999983
No 470
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=86.49 E-value=0.27 Score=41.48 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|||+|..|...+..|.+.|.+|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 58999999999999999999999999999874
No 471
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.35 E-value=0.59 Score=48.30 Aligned_cols=32 Identities=25% Similarity=0.331 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||.|.-|+..|..|++.|++|+++|++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 58999999999999999999999999999973
No 472
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=86.24 E-value=0.64 Score=47.87 Aligned_cols=37 Identities=22% Similarity=0.417 Sum_probs=32.4
Q ss_pred CceEEEECCChhHHHHHHHHHhCCC-eEEEEcccCcCC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGS-EVTFIEALDQLM 305 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~l 305 (551)
..+|+|||+|..|+-.|..|.+.|. +|+++++++++.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIG 41 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCC
Confidence 3579999999999999999999998 899999876543
No 473
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.15 E-value=0.62 Score=47.73 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||.|.-|+..|..|++.|++|+++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 47999999999999999999999999999984
No 474
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=86.13 E-value=0.69 Score=43.98 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 103 DLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
+|.|||+|.-|...|..|.+.|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcC
Confidence 6999999999999999999999999999983
No 475
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.06 E-value=0.75 Score=41.61 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|.+.|..|.+.|++|+++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 47999999999999999999999999999983
No 476
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.97 E-value=0.61 Score=47.87 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|+|||||..|...+..|.+.|.+|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 58999999999999999999999999999973
No 477
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.91 E-value=0.65 Score=46.23 Aligned_cols=32 Identities=28% Similarity=0.475 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..|+|+|+|..|..+|..|+..|.+|+++|+.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 58999999999999999999999999999973
No 478
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=85.79 E-value=0.4 Score=51.91 Aligned_cols=36 Identities=31% Similarity=0.248 Sum_probs=33.2
Q ss_pred CceEEEECCChhHHHHHHHHHhCC--------CeEEEEcccC-cC
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALG--------SEVTFIEALD-QL 304 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g--------~~Vtlv~~~~-~~ 304 (551)
+++|+|||+|.+|+-.|..|.+.| .+|+++++++ ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999988 8999999988 77
No 479
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.72 E-value=3 Score=42.16 Aligned_cols=80 Identities=24% Similarity=0.326 Sum_probs=0.0
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc--------CCCCCCHHHHHHHHHHHhCCCceEEEeceEEEeCCCc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ--------LMPGFDPEIGKLAQRVLINPRKIDYHTGVFATKDGKP 340 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~--------~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~~~ 340 (551)
+.++.|||.|+.|+-+|..|++.|.+|+.+++.+. ..+...+.+.+.+.+.+.. ..+.+-...
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~-g~l~~ttd~-------- 81 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSS-GKLKVSTTP-------- 81 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHT-TCEEEESSC--------
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhccc-CceEEeCch--------
Q ss_pred EEEEEecccCCCCCeEEecCEEEEeecCCCCCC
Q 008850 341 VTIELIDAKTKEPKDTLEVDAALIATGRAPFTN 373 (551)
Q Consensus 341 ~~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~ 373 (551)
. .+|.+|+|++.....+
T Consensus 82 --------------~--~aDvvii~VpTp~~~~ 98 (431)
T 3ojo_A 82 --------------E--ASDVFIIAVPTPNNDD 98 (431)
T ss_dssp --------------C--CCSEEEECCCCCBCSS
T ss_pred --------------h--hCCEEEEEeCCCcccc
No 480
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=85.65 E-value=0.57 Score=44.94 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|.+.|++|++++|.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 47999999999999999999999999999984
No 481
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.63 E-value=0.82 Score=44.49 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=29.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-cEEEeeC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEG 132 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~ 132 (551)
..+|.|||+|..|.+.|..|+..|+ +++++|.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di 39 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDI 39 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 3589999999999999999999998 9999997
No 482
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=85.50 E-value=0.75 Score=43.84 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=31.4
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCc
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQ 303 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 303 (551)
++|.|||+|..|..+|..|++.|.+|+++++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 6899999999999999999999999999987653
No 483
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.31 E-value=0.72 Score=46.03 Aligned_cols=33 Identities=30% Similarity=0.461 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
...|+|||+|..|..+|..++..|.+|+++|+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 358999999999999999999999999999973
No 484
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=85.28 E-value=1.3 Score=46.31 Aligned_cols=83 Identities=18% Similarity=0.055 Sum_probs=54.6
Q ss_pred hccccCCceEEEECCChhHHH-HHHHHHhCCCeEEEEcccCcCCCCCCHHHHHHHHHHHhCCCceEEEeceEEEeCCCcE
Q 008850 263 LKLEFVPDWIAIVGSGYIGLE-FSDVYTALGSEVTFIEALDQLMPGFDPEIGKLAQRVLINPRKIDYHTGVFATKDGKPV 341 (551)
Q Consensus 263 ~~~~~~~k~v~VvG~G~~g~e-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~~gi~~~~~~~~~~~~~~~ 341 (551)
..+.+..+++.+||-|-+|+- +|..|.+.|.+|+..+..+. ++ ..+.|++ .||+++.+.. ..
T Consensus 13 ~~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~-----~~-----~~~~L~~-~gi~~~~G~~----~~-- 75 (524)
T 3hn7_A 13 ENLYFQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY-----PP-----MSTQLEQ-AGVTIEEGYL----IA-- 75 (524)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----TT-----HHHHHHH-TTCEEEESCC----GG--
T ss_pred cceeecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC-----cH-----HHHHHHH-CCCEEECCCC----HH--
Confidence 445566799999999999997 68889999999999987642 11 2234444 6888776521 00
Q ss_pred EEEEecccCCCCCeEEecCEEEEeecCCCCCCC
Q 008850 342 TIELIDAKTKEPKDTLEVDAALIATGRAPFTNG 374 (551)
Q Consensus 342 ~v~~~~g~~~~~~~~i~~D~vi~a~G~~p~~~~ 374 (551)
.....+|.||+++|..|..+.
T Consensus 76 ------------~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 76 ------------HLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp ------------GGCSCCSEEEECTTCCTTSHH
T ss_pred ------------HcCCCCCEEEECCCcCCCCHH
Confidence 011247999999998887653
No 485
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=85.27 E-value=0.8 Score=49.08 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=31.8
Q ss_pred ceEEEECCChhHHHHHHHHHhCCCeEEEEcccCcC
Q 008850 270 DWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 304 (551)
Q Consensus 270 k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 304 (551)
..|+|||+|..|+..|..|++.|.+|+++++.+..
T Consensus 47 ~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~ 81 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEID 81 (623)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCC
Confidence 46999999999999999999999999999987643
No 486
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=85.25 E-value=0.87 Score=44.03 Aligned_cols=33 Identities=15% Similarity=0.410 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+|.|||.|.-|...|..|++.|++|+++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 358999999999999999999999999999983
No 487
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=84.82 E-value=1.6 Score=45.70 Aligned_cols=127 Identities=16% Similarity=0.135 Sum_probs=76.1
Q ss_pred ccEEEECCChHHHHH-HHHHHHcCCcEEEeeCCccCcccccCCccCChhhHhhHHHHHHHHhhhhhhhcCccccccccCH
Q 008850 102 YDLIIIGAGVGGHGA-ALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKALGLQVHAAGYDR 180 (551)
Q Consensus 102 ~dVvIIGgG~AGl~a-A~~l~~~g~~V~liE~~~~GG~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 180 (551)
.+|.+||-|-+|+++ |..|.++|++|.+.|.... |
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~----------~---------------------------------- 55 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALGHTVTGSDANIY----------P---------------------------------- 55 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------T----------------------------------
T ss_pred CEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC----------c----------------------------------
Confidence 479999999999985 7778889999999997320 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEeceEEEeCCcEEEeCcceEEEeCeEEEeCCCCCCCCCCcc--CCCceeec
Q 008850 181 QGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIE--VDGKTVIT 258 (551)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~~~~g~~i~~d~lVlAtG~~p~~p~~~~--~~~~~v~~ 258 (551)
. ....++..|+++..|. +... ..-.+|.||+.+|..+..|.... ..+..+++
T Consensus 56 ------------~----~~~~L~~~gi~~~~G~----~~~~------~~~~~d~vV~Spgi~~~~p~l~~a~~~gi~v~~ 109 (524)
T 3hn7_A 56 ------------P----MSTQLEQAGVTIEEGY----LIAH------LQPAPDLVVVGNAMKRGMDVIEYMLDTGLRYTS 109 (524)
T ss_dssp ------------T----HHHHHHHTTCEEEESC----CGGG------GCSCCSEEEECTTCCTTSHHHHHHHHHTCCEEE
T ss_pred ------------H----HHHHHHHCCCEEECCC----CHHH------cCCCCCEEEECCCcCCCCHHHHHHHHCCCcEEE
Confidence 0 0112344688887663 0000 01148999999998766554322 12344554
Q ss_pred chhhhc--cccCCceEEEECC-Chh--HHHHHHHHHhCCCeEEEE
Q 008850 259 SDHALK--LEFVPDWIAIVGS-GYI--GLEFSDVYTALGSEVTFI 298 (551)
Q Consensus 259 ~~~~~~--~~~~~k~v~VvG~-G~~--g~e~A~~l~~~g~~Vtlv 298 (551)
-.++.. +....+.|+|-|. |-+ ..-++..|...|.++.++
T Consensus 110 ~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~~~~~~ 154 (524)
T 3hn7_A 110 GPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGIDAGFL 154 (524)
T ss_dssp HHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCCCceEE
Confidence 444332 1122244666664 433 345667778888887644
No 488
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.80 E-value=0.82 Score=44.41 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=29.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--cEEEeeC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL--KTAIIEG 132 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~ 132 (551)
..+|+|||+|..|.+.|..|...++ +++++|.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 3689999999999999999999987 8999996
No 489
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=84.62 E-value=0.95 Score=44.17 Aligned_cols=32 Identities=31% Similarity=0.280 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-cEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|++.|+ +|+++|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 489999999999999999999998 99999973
No 490
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.59 E-value=0.38 Score=40.60 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=30.4
Q ss_pred CceEEEECCChhHHHHHHHHHhCCCeEEEEccc
Q 008850 269 PDWIAIVGSGYIGLEFSDVYTALGSEVTFIEAL 301 (551)
Q Consensus 269 ~k~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 301 (551)
+++++|||+|.+|..++..|.+.|.+|+++.|.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 789999999999999999999999898888875
No 491
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=84.53 E-value=0.8 Score=48.69 Aligned_cols=32 Identities=13% Similarity=0.216 Sum_probs=29.9
Q ss_pred eEEEECCChhHHHHHHHHHhCCCeEEEEcccC
Q 008850 271 WIAIVGSGYIGLEFSDVYTALGSEVTFIEALD 302 (551)
Q Consensus 271 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 302 (551)
.|+|||+|..|+-.|..+++.|.+|+++++.+
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 69999999999999999999999999998764
No 492
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=84.47 E-value=0.93 Score=42.88 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..++|+|+|-.|.++|..|.+.|.+|++++|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 57999999999999999999999999999874
No 493
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=84.47 E-value=0.94 Score=41.52 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=30.3
Q ss_pred cccEEEECC-ChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGA-GVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGg-G~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
...|+|.|| |.-|...+.+|.+.|++|+++.|.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 468999998 999999999999999999999884
No 494
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.37 E-value=0.87 Score=43.92 Aligned_cols=31 Identities=26% Similarity=0.483 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--cEEEeeCC
Q 008850 103 DLIIIGAGVGGHGAALHAVEKGL--KTAIIEGD 133 (551)
Q Consensus 103 dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~~ 133 (551)
+|+|||+|..|.+.|..|+..|+ +|+++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 69999999999999999999998 99999974
No 495
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.36 E-value=1.1 Score=43.23 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..|.+.|++|+++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999873
No 496
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.26 E-value=0.85 Score=44.28 Aligned_cols=32 Identities=25% Similarity=0.454 Sum_probs=28.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--cEEEeeC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL--KTAIIEG 132 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~--~V~liE~ 132 (551)
..+|+|||+|..|.+.|..|...++ ++.++|.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 3689999999999999999998885 7999986
No 497
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=84.17 E-value=1 Score=43.90 Aligned_cols=34 Identities=18% Similarity=0.384 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-cEEEeeCCc
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGL-KTAIIEGDV 134 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~-~V~liE~~~ 134 (551)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3589999999999999999999997 699999754
No 498
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=84.08 E-value=0.94 Score=46.60 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHc-CC-cEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEK-GL-KTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~-g~-~V~liE~~ 133 (551)
.+|.|||.|.-|+..|..|++. |+ +|+++|++
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4899999999999999999999 99 99999984
No 499
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.05 E-value=1.7 Score=44.38 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 102 YDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 102 ~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
.+|.|||+|.-|...|..+++.|++|+++|++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECc
Confidence 57999999999999999999999999999984
No 500
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.00 E-value=1 Score=42.53 Aligned_cols=33 Identities=21% Similarity=0.403 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCcEEEeeCC
Q 008850 101 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 133 (551)
Q Consensus 101 ~~dVvIIGgG~AGl~aA~~l~~~g~~V~liE~~ 133 (551)
..+++|||+|-+|.+++..|.+.|.+|+|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 358999999999999999999999999999883
Done!