BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008851
(551 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255572355|ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor, putative [Ricinus communis]
Length = 509
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 331/518 (63%), Positives = 382/518 (73%), Gaps = 27/518 (5%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
+SSQ RCVFVGNIPYDATEEQLI+ICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA
Sbjct: 3 SSSQQRCVFVGNIPYDATEEQLIDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 62
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
LSARRNLQGYEINGRQLRVDFAENDK ADRNREQGRGGPG+A I DPQKQ+GGPAI GES
Sbjct: 63 LSARRNLQGYEINGRQLRVDFAENDKNADRNREQGRGGPGLANI-DPQKQIGGPAILGES 121
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
HQPIGLHIAITAA VM GALG Q G+QSN NG+QSQ A +DPLTLHLAKMSR+QLN
Sbjct: 122 AQHQPIGLHIAITAATVMAGALGGVQTGMQSNLNGLQSQSALASDPLTLHLAKMSRSQLN 181
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQ 241
+IMSE+K+MATQNKE AR LLL KP L KALFQAQIMLGM TPQVLQMP +RQ PG PA
Sbjct: 182 DIMSELKVMATQNKESARHLLLTKPQLPKALFQAQIMLGMVTPQVLQMPNIRQPPGQPAV 241
Query: 242 PLFQDGQQ----QVAQLPGLPPLAQKMQ--LMPKVQEAQIQ-------LHNQFSAATQPT 288
+D QQ + +PGLPP +Q++Q L+PK+QE Q + NQFS Q
Sbjct: 242 RPLEDSQQGQRPAIQNVPGLPPFSQRIQSSLVPKLQEGQFSSVSQNSLVQNQFSVPPQ-L 300
Query: 289 LHPQIQLPQNAKNQALQQASLPGQSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLEN 348
+ P+ Q+ Q++ + QQA L GQSG+P +P +HPSVRPQIQ+ANSSSLNQQ PPSL
Sbjct: 301 VQPRTQIQQHSNSHIPQQAILSGQSGVPPIPHVHPSVRPQIQVANSSSLNQQT-PPSLLQ 359
Query: 349 Q--VQVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDAERS 406
Q QV +N G+ + LPN AM SS P P DA FQPGP +GI +V R A+RS
Sbjct: 360 QPGKQVRTANFGRASHIVLPNVAMESSIFPRPLQPDAAFQPGPPILSGISDSVGRGADRS 419
Query: 407 ARVPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALN 466
+VP+D + HRNNAY M + VND + I+ PSK++K +DG SFS ALN
Sbjct: 420 TQVPDDTAQVHRNNAYFKMQTNM------VNDSKEPINRPSKMLKLDDGRSMSFSSSALN 473
Query: 467 VSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQ 504
VSK S P+Q+ VP N +PK EE+Q SEKQ+ Q
Sbjct: 474 VSK---SGPTQSHAISSVPANSLPKPEELQTSEKQVSQ 508
>gi|359495190|ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256296 [Vitis vinifera]
gi|297739347|emb|CBI29337.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 341/557 (61%), Positives = 406/557 (72%), Gaps = 34/557 (6%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MASSQHRCVFVGNIPYDATEEQLI+IC EVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1 MASSQHRCVFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGM A V+PQKQ+GGPAI G+
Sbjct: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMVANVEPQKQVGGPAILGD 120
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
+ HQP+GL +A+ A++VM GALG AQ G +SNQNG QSQ +DPLTLHLAKMSRNQL
Sbjct: 121 AALHQPVGLPLAMAASSVMAGALGGAQAGSKSNQNGFQSQAMLGSDPLTLHLAKMSRNQL 180
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPA 240
NE++S++K+MAT+NKE ARQLLL P L KALFQAQIMLGM TPQVLQMP +RQ P
Sbjct: 181 NEVISDLKVMATKNKELARQLLLTSPQLPKALFQAQIMLGMVTPQVLQMPNIRQASVPPT 240
Query: 241 QPLFQDGQQQ----VAQLPGLPPLAQ-KMQ--LMPKVQEAQIQ-------LHNQFSAATQ 286
QP+ QDGQQ V L GLPPLAQ KMQ LMPK QE Q+ +H+QFSA Q
Sbjct: 241 QPVLQDGQQGQQLAVQTLSGLPPLAQSKMQLGLMPKGQEGQVSAMPHNSLVHSQFSALPQ 300
Query: 287 PTLHPQIQLPQNAKNQALQQASLPGQSGIPMLPSMHPS------VRPQIQLANSSSLNQQ 340
PQIQLP NQALQQA+ GQSG+ LPS+ P VRPQIQ+A+SSSL Q
Sbjct: 301 QPAQPQIQLPPQGHNQALQQATFAGQSGVTALPSVRPQPPAKLPVRPQIQVASSSSLKHQ 360
Query: 341 VHPPSLENQVQVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVS 400
+ PP L+ Q ++ G N+ +PN+ +R + + P D+GFQPG ST + I +T +
Sbjct: 361 MQPPLLQQPGQFGSAKSGNNSQLVIPNATLRPTLMTRPSFPDSGFQPGSSTFSSIPETTN 420
Query: 401 RDAERSARVPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSF 460
+A+RS++V NN Y+NM GL+ K+S D + ++HPSK+VK +DG F
Sbjct: 421 NNADRSSQV--------TNNTYSNMPSGLSMKKSMARDTSEPMNHPSKMVKLDDGRRAPF 472
Query: 461 SVGALNV----SKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQIS--PDVESALL 514
S LN+ + S PSQ G G V NQ+ K EEVQ+ +K+ PQ+ P++ESALL
Sbjct: 473 STVGLNLSTSSASASASGPSQVLGIGSVSANQISKAEEVQHMDKKAPQLQLPPEIESALL 532
Query: 515 QQVLSLTPEQLNSLPPE 531
QQVL+LTPEQL+SLPPE
Sbjct: 533 QQVLNLTPEQLSSLPPE 549
>gi|356574567|ref|XP_003555417.1| PREDICTED: uncharacterized protein LOC100806489 [Glycine max]
Length = 544
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 332/569 (58%), Positives = 391/569 (68%), Gaps = 51/569 (8%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
SQHRCVFVGNIPYDATEEQLIEIC+EVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS
Sbjct: 6 SQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 65
Query: 64 ARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVH 123
ARRNLQGYEINGRQLRVDFAENDKG DRNREQGRGGPGM VD QKQ+G PA+HGE+V
Sbjct: 66 ARRNLQGYEINGRQLRVDFAENDKGNDRNREQGRGGPGMTTNVDHQKQVGVPAVHGEAVQ 125
Query: 124 HQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEI 183
HQPIGLHIAITAAAVMT ALG AQ G+QSNQN +QSQ A +DPLTLHLAKMSR+QL EI
Sbjct: 126 HQPIGLHIAITAAAVMTAALGGAQFGIQSNQNSLQSQSALAHDPLTLHLAKMSRSQLTEI 185
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPL 243
+SE+K MATQNKE ARQLLL++P L KALFQAQIMLGM T QVLQMP LR +Q
Sbjct: 186 ISELKGMATQNKELARQLLLSRPQLPKALFQAQIMLGMVTSQVLQMPNLRLVSDQTSQSS 245
Query: 244 FQDGQ----QQVAQLPGLPPLAQKMQ--LMPKVQEAQIQL--HN-----QFSAATQPTLH 290
+GQ V L GLP K+Q L P QE Q+ HN Q +A +P +
Sbjct: 246 MNEGQLGQASLVQTLSGLPHGQDKLQPGLTPYAQEGQVNTIPHNPLVPSQLTAHPKPPVQ 305
Query: 291 PQIQLPQNAKNQALQQASLPGQSGIPMLPSMHP------SVRPQIQLANSSSLNQQVHPP 344
P+I L QN N L +L GQS + MLPS SVRP IQLA S++LNQQ+H
Sbjct: 306 PRIPLQQNPNNLVL-PGTLSGQSNL-MLPSARSPGLGSLSVRPPIQLATSTALNQQMHAS 363
Query: 345 SLENQVQVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDAE 404
L++ V V S +G N +PGPS S Q +S+ +
Sbjct: 364 LLQHSVHVGNSTVGHNVQ-----------------------KPGPSMSTTNSQLLSK-GD 399
Query: 405 RSARVPEDGTRAHRNNAY--TNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSV 462
+S++V ED A R N Y +N+ +G+ K + V D +S + PSK++K ++G T S
Sbjct: 400 KSSKVIEDLNWAKRTNTYSKSNIPLGV-EKTNMVRDSSESFTRPSKVMKLDEGRSTPLSA 458
Query: 463 GALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTP 522
G L++ P+ S G +PV+ PK E QYSE+Q Q+ PDVES LLQQVL+LTP
Sbjct: 459 GILDM--PVTDGSSHILGRSSLPVHAAPKAEG-QYSEQQSSQLPPDVESVLLQQVLNLTP 515
Query: 523 EQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
EQL+SLPP+Q+QQV+QLQQAL RDQ+QPS
Sbjct: 516 EQLSSLPPDQQQQVLQLQQALRRDQIQPS 544
>gi|356535727|ref|XP_003536395.1| PREDICTED: uncharacterized protein LOC100794399 [Glycine max]
Length = 545
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 329/570 (57%), Positives = 389/570 (68%), Gaps = 52/570 (9%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
SQHRCVFVGNIPYDATEEQLIEIC+EVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS
Sbjct: 6 SQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 65
Query: 64 ARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVH 123
ARRNLQGYEINGRQLRVDFAENDKG DRNREQGRGGPGM VD QKQ+G PA+ GE+V
Sbjct: 66 ARRNLQGYEINGRQLRVDFAENDKGNDRNREQGRGGPGMTTNVDHQKQVGIPAVLGEAVQ 125
Query: 124 HQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEI 183
HQPIGLHIAITAAAVMT ALG AQ G+QSNQN +QSQ A +DPLTLHLAKMSR+QL EI
Sbjct: 126 HQPIGLHIAITAAAVMTAALGGAQFGIQSNQNSLQSQSALAHDPLTLHLAKMSRSQLTEI 185
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPL 243
+SE+K MATQNKE ARQLLL++P L KALFQAQIMLGM T QVLQMP LR +Q L
Sbjct: 186 ISELKGMATQNKELARQLLLSRPQLPKALFQAQIMLGMVTSQVLQMPNLRLVSDQTSQSL 245
Query: 244 FQDGQ----QQVAQLPGLPPLAQ-KMQ--LMPKVQEAQIQL--H-----NQFSAATQPTL 289
+GQ V L GLPP Q K+Q L P QE Q+ H NQ +A +P +
Sbjct: 246 MNEGQLGQPSLVQTLSGLPPPGQGKLQPGLTPYAQEGQVNTIPHNPLAPNQLTAHPKPPV 305
Query: 290 HPQIQLPQNAKNQALQQASLPGQSGIPMLPSMHP------SVRPQIQLANSSSLNQQVHP 343
P+I L Q+ N L +L GQS + MLPS P SVRP IQ S++LNQQ+HP
Sbjct: 306 QPRIPLQQHPNNLVL-PGTLSGQSNL-MLPSARPPGLGSLSVRPLIQPGTSTALNQQMHP 363
Query: 344 PSLENQVQVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDA 403
L++ V V S +G N PS S+ Q +S+
Sbjct: 364 SLLQHSVHVGNSTVGHNIQMHC-----------------------PSMSSANSQLLSK-G 399
Query: 404 ERSARVPEDGTRAHRNNAY--TNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFS 461
++S++V ED A R N + +N+ +G+ K + V+D +S + PSK++K ++G S
Sbjct: 400 DKSSKVIEDLNWAKRANTHSKSNIPLGV-EKTNMVHDSSESFTRPSKVMKLDEGRSAPLS 458
Query: 462 VGALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLT 521
G ++ P S G +PV+ PK E QYSE+Q Q+ PDVES LLQQVL+LT
Sbjct: 459 SGISDM--PFTDGSSHILGRSSLPVHAAPKAEG-QYSEQQFSQLPPDVESVLLQQVLNLT 515
Query: 522 PEQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
PEQL+SLPP+Q+QQVIQLQQAL RDQ+QPS
Sbjct: 516 PEQLSSLPPDQQQQVIQLQQALRRDQIQPS 545
>gi|449494200|ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225147 [Cucumis sativus]
Length = 527
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 320/568 (56%), Positives = 373/568 (65%), Gaps = 58/568 (10%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MAS+QHRCVFVGNIPYDATEEQLIEIC+EVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1 MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG+ A GGP HGE
Sbjct: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVA------NAGGPTPHGE 114
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
S HQPIGLHIAITAAAVM GA SNQN +QS PNDPLTLHLAK+SR+QL
Sbjct: 115 SSQHQPIGLHIAITAAAVMAGA--LGGAQAASNQNNLQSA-TMPNDPLTLHLAKLSRSQL 171
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPA 240
E+MS +K MATQNK+ ARQLLLA+P L KALFQ+QIMLGM TPQVLQ P L+Q HP
Sbjct: 172 TEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQ 231
Query: 241 QPLFQDGQQQVAQL---PGLPPLA-QKMQ--LMPKVQEAQIQLH-------NQFSAATQP 287
PL + Q Q + L PGLPPLA +MQ +PK +E Q L +QFSA+ +P
Sbjct: 232 LPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPK-KETQSSLMPQNPLAPHQFSASQRP 290
Query: 288 TLHPQIQLPQNAKNQALQQASLPGQSGIPMLPSM----HPSVRPQIQLANSSSLNQQVHP 343
+L QIQ Q SL G G LPS+ + S+R Q+Q +SSSL Q + P
Sbjct: 291 SLQSQIQPSHTL------QGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRP 344
Query: 344 PSLENQVQVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDA 403
P + A G NT + N + S LPHP SDA FQPGPST+ Q V D
Sbjct: 345 PPQQYLGHGGALIPGHNTH--ITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDV 402
Query: 404 ERSARVPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVG 463
++S+ VP +G+ KR+ ++ + + P K +K EDG G+SF G
Sbjct: 403 DKSSPVP----------------LGVDGKRTMLHGFSGTTNRPVKQIKLEDGKGSSFLAG 446
Query: 464 ALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPE 523
L+ S IG+ G+G + + P V Q SEK + +VES LLQQVL+LTPE
Sbjct: 447 GLSTS--IGTN-----GSGQLGIASDPNVTGTQLSEKPTSLLPQNVESVLLQQVLNLTPE 499
Query: 524 QLNSLPPEQRQQVIQLQQALLRDQMQPS 551
QLNSLP EQR QVI+LQ AL RDQM+PS
Sbjct: 500 QLNSLPLEQRLQVIELQHALRRDQMRPS 527
>gi|449446484|ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211663 [Cucumis sativus]
Length = 527
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 319/568 (56%), Positives = 373/568 (65%), Gaps = 58/568 (10%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MAS+QHRCVFVGNIPYDATEEQLIEIC+EVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1 MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG+ A GGP HGE
Sbjct: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVA------NAGGPTPHGE 114
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
+ HQPIGLHIAITAAAVM GA SNQN +QS PNDPLTLHLAK+SR+QL
Sbjct: 115 ASQHQPIGLHIAITAAAVMAGA--LGGAQAASNQNNLQSA-TMPNDPLTLHLAKLSRSQL 171
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPA 240
E+MS +K MATQNK+ ARQLLLA+P L KALFQ+QIMLGM TPQVLQ P L+Q HP
Sbjct: 172 TEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQ 231
Query: 241 QPLFQDGQQQVAQL---PGLPPLA-QKMQ--LMPKVQEAQIQLH-------NQFSAATQP 287
PL + Q Q + L PGLPPLA +MQ +PK +E Q L +QFSA+ +P
Sbjct: 232 LPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPK-KETQSSLMPQNPLAPHQFSASQRP 290
Query: 288 TLHPQIQLPQNAKNQALQQASLPGQSGIPMLPSM----HPSVRPQIQLANSSSLNQQVHP 343
+L QIQ Q SL G G LPS+ + S+R Q+Q +SSSL Q + P
Sbjct: 291 SLQSQIQPSHTL------QGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRP 344
Query: 344 PSLENQVQVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDA 403
P + A G NT + N + S LPHP SDA FQPGPST+ Q V D
Sbjct: 345 PPQQYLGHGGALIPGHNTH--ITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDV 402
Query: 404 ERSARVPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVG 463
++S+ VP +G+ KR+ ++ + + P K +K EDG G+SF G
Sbjct: 403 DKSSPVP----------------LGVDGKRTMLHGFSGTTNRPVKQIKLEDGKGSSFLAG 446
Query: 464 ALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPE 523
L+ S IG+ G+G + + P V Q SEK + +VES LLQQVL+LTPE
Sbjct: 447 GLSTS--IGTN-----GSGQLGIASDPNVTGTQLSEKPTSLLPQNVESVLLQQVLNLTPE 499
Query: 524 QLNSLPPEQRQQVIQLQQALLRDQMQPS 551
QLNSLP EQR QVI+LQ AL RDQM+PS
Sbjct: 500 QLNSLPLEQRLQVIELQHALRRDQMRPS 527
>gi|224066585|ref|XP_002302149.1| predicted protein [Populus trichocarpa]
gi|222843875|gb|EEE81422.1| predicted protein [Populus trichocarpa]
Length = 561
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 310/527 (58%), Positives = 367/527 (69%), Gaps = 32/527 (6%)
Query: 38 LVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGR 97
LVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDK ADRNREQGR
Sbjct: 54 LVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKNADRNREQGR 113
Query: 98 GGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGI 157
GGP +AA DPQKQ GGPAI E HQPIGLHIAITAA VM G LG AQ +QSNQNG+
Sbjct: 114 GGPRLAANNDPQKQAGGPAILEEPAQHQPIGLHIAITAATVMAGTLGGAQTVMQSNQNGL 173
Query: 158 QSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQI 217
QSQ A +DPLTLHLAKMSRNQLNEIMSE+K MATQN+E A QLLL KP L KALFQAQI
Sbjct: 174 QSQPALASDPLTLHLAKMSRNQLNEIMSELKGMATQNREAAHQLLLGKPQLSKALFQAQI 233
Query: 218 MLGMATPQVLQMPILRQGPGHPAQPLFQDGQQ----QVAQLPGLPPLAQKMQL------- 266
MLGM TPQVLQ+P +RQ G PA QD QQ V LPGLPP AQ+MQL
Sbjct: 234 MLGMVTPQVLQLPNIRQSTGQPALSSLQDSQQVQRPAVPNLPGLPPTAQRMQLGLGQFSA 293
Query: 267 --MPKVQEAQIQLHNQFSAATQPTLHPQIQLPQNAKNQALQQASLPGQSGIPMLPSMHPS 324
P VQ + +HNQFSA QP++ Q Q+P + N A+L GQS LP++ PS
Sbjct: 294 GPQPSVQPQKSLVHNQFSATPQPSVQAQTQIPHHVNNHVPHHATLLGQSAP--LPAVLPS 351
Query: 325 VRPQIQLANSSSLNQQVHPPSLENQVQVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAG 384
VRP +Q+ANS+ LNQQ+ P +++ QV +N N LPN AM+SS L PP++ +
Sbjct: 352 VRPPVQMANSAPLNQQMQPSLVQHTRQVGNTNARHNPQVVLPNKAMQSSLLSRPPATGS- 410
Query: 385 FQPGPSTSAGIGQTVSRDAERSARVPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLDSIS 444
FQ + + + +A+RS R+NAY NM + ST +D + ++
Sbjct: 411 FQQSGLSVSSGLSDAA-NADRSTL---------RSNAYLNM------QTSTAHDSKEPVN 454
Query: 445 HPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQ 504
PSK++K +DG S +G N+ GS PSQA VP N +P+ E++Q+S KQ PQ
Sbjct: 455 RPSKVLKLDDGRSMSVPMGGSNLFSATGSGPSQAPAVNSVPPNPLPRPEDLQHSGKQAPQ 514
Query: 505 ISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
+ D+ESALLQQVL+LTPEQL+SLPP+Q+QQVIQLQQALLRDQMQPS
Sbjct: 515 LPADIESALLQQVLNLTPEQLSSLPPDQQQQVIQLQQALLRDQMQPS 561
>gi|22330574|ref|NP_177325.2| cleavage stimulating factor 64 [Arabidopsis thaliana]
gi|7239507|gb|AAF43233.1|AC012654_17 Contains similarity to the polyadenylation factor 64 kDa subunit
from Xenopus laevis gb|U17394; It contains RNA
recognition motif PF|00076. ESTs gb|AI993960 and T42211
come from this gene [Arabidopsis thaliana]
gi|110738120|dbj|BAF00992.1| cleavage stimulation factor like protein [Arabidopsis thaliana]
gi|332197113|gb|AEE35234.1| cleavage stimulating factor 64 [Arabidopsis thaliana]
Length = 461
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 266/557 (47%), Positives = 338/557 (60%), Gaps = 106/557 (19%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
+SSQ RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 4 SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 63
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGM---AAIVDPQKQLGGPAIH 118
LSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPG+ + + QKQ+GGP
Sbjct: 64 LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV-- 121
Query: 119 GESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRN 178
+S HQP+GLH+A TAA+V+ GALG QVG Q Q+ +Q +DPL LHLAKMSR+
Sbjct: 122 -DSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQ---VPASDPLALHLAKMSRS 177
Query: 179 QLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGH 238
QL EI+S +KLMATQNKE ARQLL+++P LLKA+F AQ+MLG+ +PQVLQ P + Q P H
Sbjct: 178 QLTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSH 237
Query: 239 PAQPLFQDGQQQVAQLPG---LPPLAQKMQLMPKVQEAQIQLHNQFSAATQPTLHPQIQL 295
QD AQL G LPPLAQ+ Q + + H+Q+ Q + P Q+
Sbjct: 238 MTGSSIQD-----AQLSGQNLLPPLAQRSQQLSRAP------HSQY-PVQQSSKQPFSQI 285
Query: 296 PQNAKNQALQQASLPGQSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLENQVQVSAS 355
P Q + PG S S++P R Q+++ N+ QQV P +++
Sbjct: 286 P--------QLVAQPGPS------SVNPPPRSQVKVENAPFQRQQVVP---------AST 322
Query: 356 NLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDAERSARVPEDGTR 415
N+G ++ +PN+A++ S +PH ++ Q G GQTVS
Sbjct: 323 NIGYSSQNSVPNNAIQPSQVPHQALPNSVMQQG-------GQTVS--------------- 360
Query: 416 AHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAP 475
++ G KR P S++ PSK++K ED TS G ++ S P
Sbjct: 361 ---------LNFG---KRINEGPPHQSMNRPSKMMKVEDRRTTSLPGGHVSNSM----LP 404
Query: 476 SQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSLPPEQRQQ 535
+QA Q P+ ISPDV+S LLQQV++LTPEQL L PEQ+Q+
Sbjct: 405 NQA---------QAPQTH-----------ISPDVQSTLLQQVMNLTPEQLRLLTPEQQQE 444
Query: 536 VIQLQQALLRDQ-MQPS 551
V++LQQAL +D MQPS
Sbjct: 445 VLKLQQALKQDHMMQPS 461
>gi|297839015|ref|XP_002887389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333230|gb|EFH63648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 460
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/552 (47%), Positives = 336/552 (60%), Gaps = 103/552 (18%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
+SSQ RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 3 SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 62
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGM---AAIVDPQKQLGGPAIH 118
LSARRNLQ YEINGRQLRVDFAENDKG D+ R+QG+GGPG+ + + + QKQ+GGP
Sbjct: 63 LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQGQGGPGLPSTSVMTESQKQIGGPV-- 120
Query: 119 GESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRN 178
++ HQP+GL++AITAA+VM GALG QVG Q Q+ +Q +DPLTLHLAKMSR+
Sbjct: 121 -DTNMHQPVGLNVAITAASVMAGALGGPQVGSQFTQSNLQ---VPASDPLTLHLAKMSRS 176
Query: 179 QLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGH 238
QL EI+S +KLMATQNKEQARQLL+++P LLKA+F AQIMLG+ +PQVLQ P + Q P H
Sbjct: 177 QLTEIISSIKLMATQNKEQARQLLVSRPQLLKAVFLAQIMLGIVSPQVLQSPNIVQAPSH 236
Query: 239 PAQPLFQDGQQQVAQLPGLPPLAQKMQLMPKVQEAQIQLHNQFSAATQPTLHPQIQLPQN 298
QD Q L LPPLAQ+ Q + + ++Q + Q + P Q+P
Sbjct: 237 MTGSSIQDTQLSGQNL--LPPLAQRSQQLSRAPQSQYPVQ-------QSSKQPFSQIP-- 285
Query: 299 AKNQALQQASLPGQSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLENQVQVSASNLG 358
Q + PG S S++P R Q++ + QQ P +++N+G
Sbjct: 286 ------QLVAQPGPS------SVNPPPRSQVKGETAPFQRQQGVP---------ASTNIG 324
Query: 359 QNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDAERSARVPEDGTRAHR 418
++ T +PN+A++ S +PHP +++ Q G GQTVS +
Sbjct: 325 YSSQTSVPNNAIQPSQVPHPALTNSVMQQG-------GQTVSLN---------------- 361
Query: 419 NNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQA 478
KR P S++ PSK++K +D TS G + S
Sbjct: 362 -----------YGKRINEGPPHQSMNRPSKMMKVDDRRTTSHPGGHASNS---------- 400
Query: 479 FGAGLVPVNQVPKVEEVQYSEKQIPQ--ISPDVESALLQQVLSLTPEQLNSLPPEQRQQV 536
++P NQV Q PQ ISPDV+ LLQQV++LTPEQL L PEQ+Q+V
Sbjct: 401 ----MLP-NQV-----------QAPQTRISPDVQPTLLQQVMNLTPEQLRLLTPEQQQEV 444
Query: 537 IQLQQALLRDQM 548
++LQQAL +D M
Sbjct: 445 LKLQQALKQDHM 456
>gi|21591633|gb|AAM64164.1|AF515695_1 cleavage stimulation factor 64 [Arabidopsis thaliana]
Length = 461
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 265/557 (47%), Positives = 338/557 (60%), Gaps = 106/557 (19%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
+SSQ RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 4 SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 63
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGM---AAIVDPQKQLGGPAIH 118
LSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPG+ + + QKQ+GGP
Sbjct: 64 LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV-- 121
Query: 119 GESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRN 178
+S HQP+GLH+A TAA+V+ GA+G QVG Q Q+ +Q +DPL LHLAKMSR+
Sbjct: 122 -DSNMHQPVGLHLATTAASVIAGAIGGPQVGSQFTQSNLQ---VPASDPLALHLAKMSRS 177
Query: 179 QLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGH 238
QL EI+S +KLMATQNKE ARQLL+++P LLKA+F AQ+MLG+ +PQVLQ P + Q P H
Sbjct: 178 QLTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSH 237
Query: 239 PAQPLFQDGQQQVAQLPG---LPPLAQKMQLMPKVQEAQIQLHNQFSAATQPTLHPQIQL 295
QD AQL G LPPLAQ+ Q + + H+Q+ Q + P Q+
Sbjct: 238 MTGSSIQD-----AQLSGQNLLPPLAQRSQQLSRAP------HSQY-PVQQSSKQPFSQI 285
Query: 296 PQNAKNQALQQASLPGQSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLENQVQVSAS 355
P Q + PG S S++P R Q+++ N+ QQV P +++
Sbjct: 286 P--------QLVAQPGPS------SVNPPPRSQVKVENAPFQRQQVVP---------AST 322
Query: 356 NLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDAERSARVPEDGTR 415
N+G ++ +PN+A++ S +PH ++ Q G GQTVS
Sbjct: 323 NIGYSSQNSVPNNAIQPSQVPHQALPNSVMQQG-------GQTVS--------------- 360
Query: 416 AHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAP 475
++ G KR P S++ PSK++K ED TS G ++ S P
Sbjct: 361 ---------LNFG---KRINEGPPHQSMNRPSKMMKVEDRRTTSLPGGHVSNSM----LP 404
Query: 476 SQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSLPPEQRQQ 535
+QA Q P+ ISPDV+S LLQQV++LTPEQL L PEQ+Q+
Sbjct: 405 NQA---------QAPQTH-----------ISPDVQSTLLQQVMNLTPEQLRLLTPEQQQE 444
Query: 536 VIQLQQALLRDQ-MQPS 551
V++LQQAL +D MQPS
Sbjct: 445 VLKLQQALKQDHMMQPS 461
>gi|218185350|gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indica Group]
Length = 495
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 245/543 (45%), Positives = 306/543 (56%), Gaps = 89/543 (16%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETALSA
Sbjct: 10 QNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSA 69
Query: 65 RRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHH 124
RRNLQGYEINGRQLRVDFAEN + ADRNRE+GRGGPGMA+ VD QKQL G + G++ H
Sbjct: 70 RRNLQGYEINGRQLRVDFAENGRNADRNREKGRGGPGMASSVDTQKQLAGTPVVGDTGLH 129
Query: 125 QPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIM 184
QP+GL AI AA+VM G LG +Q + QNG+ Q NDPLT +LA+MS++QL EIM
Sbjct: 130 QPVGLPSAIHAASVMAGILGGSQTA--NVQNGLPVQYGLGNDPLTHYLARMSKHQLYEIM 187
Query: 185 SEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQM-------PILRQGPG 237
SE+K + +QNK+ A +LL P L KALFQ+QIMLGM TPQ++QM L Q
Sbjct: 188 SELKSLTSQNKDVANKLLQGIPQLSKALFQSQIMLGMVTPQMMQMAKSQQPSSSLAQSSS 247
Query: 238 HPAQPLFQDGQQQVAQLPGLPPLAQKMQLMPKVQEAQIQLHN--QFSAATQP--TLHPQI 293
H ++P Q A + +P + + +Q+ QLHN Q+ ++QP T+ P
Sbjct: 248 HISEPFPQPD----AMISSVPRPSASLPNPNVLQDPSAQLHNFPQYPHSSQPAGTIFPHG 303
Query: 294 QLPQNAKNQALQQASLPGQSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLENQVQVS 353
+ + L S +P LP LA S SL QV PP
Sbjct: 304 SQSGVGIHPPIVSQPLGASSSVPPLP-----------LATSGSLISQVQPP--------- 343
Query: 354 ASNLGQNTWTKLPNSAMRSSFLPH---PPSSDAGFQPGPSTSAGIGQT--VSRDAERSAR 408
F+PH PP+ AG Q P T + Q + A++ R
Sbjct: 344 --------------------FMPHHPRPPAMPAGMQQLPLTHPHVPQVPAIPDIAQKEMR 383
Query: 409 VPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVS 468
PE R+ +H K+ K EDG+ T G +N +
Sbjct: 384 FPEQANRS------------------------TEFAHHPKLRKLEDGTSTP---GIVNNN 416
Query: 469 KPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSL 528
+ APSQ G + Q E ++PQ++PDVESALLQQVL LTPEQL+SL
Sbjct: 417 PAVYPAPSQGMLPGGPSGSYNSAAVSFQQPENEVPQLTPDVESALLQQVLQLTPEQLSSL 476
Query: 529 PPE 531
P E
Sbjct: 477 PVE 479
>gi|115484443|ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|62733690|gb|AAX95801.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77548917|gb|ABA91714.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113644587|dbj|BAF27728.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|215695427|dbj|BAG90666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615613|gb|EEE51745.1| hypothetical protein OsJ_33161 [Oryza sativa Japonica Group]
Length = 495
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 245/543 (45%), Positives = 306/543 (56%), Gaps = 89/543 (16%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETALSA
Sbjct: 10 QNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSA 69
Query: 65 RRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHH 124
RRNLQGYEINGRQLRVDFAEN + ADRNRE+GRGGPGMA+ VD QKQL G + G++ H
Sbjct: 70 RRNLQGYEINGRQLRVDFAENGRNADRNREKGRGGPGMASSVDTQKQLAGTPVVGDTGLH 129
Query: 125 QPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIM 184
QP+GL AI AA+VM G LG +Q + QNG+ Q NDPLT +LA+MS++QL EIM
Sbjct: 130 QPVGLPSAIHAASVMAGILGGSQTA--NVQNGLPVQYGLGNDPLTHYLARMSKHQLYEIM 187
Query: 185 SEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQM-------PILRQGPG 237
SE+K + +QNK+ A +LL P L KALFQ+QIMLGM TPQ++QM L Q
Sbjct: 188 SELKSLTSQNKDVANKLLQGIPQLSKALFQSQIMLGMVTPQMMQMAKSQQPSSSLAQSSS 247
Query: 238 HPAQPLFQDGQQQVAQLPGLPPLAQKMQLMPKVQEAQIQLHN--QFSAATQP--TLHPQI 293
H ++P Q A + +P + + +Q+ QLHN Q+ ++QP T+ P
Sbjct: 248 HISEPFPQPD----AMISSVPRPSASLPNPNVLQDPSAQLHNFPQYPHSSQPAGTIFPHG 303
Query: 294 QLPQNAKNQALQQASLPGQSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLENQVQVS 353
+ + L S +P LP LA S SL QV PP
Sbjct: 304 SQSGVGIHPPIVSQLLGASSSVPPLP-----------LATSGSLISQVQPP--------- 343
Query: 354 ASNLGQNTWTKLPNSAMRSSFLPH---PPSSDAGFQPGPSTSAGIGQT--VSRDAERSAR 408
F+PH PP+ AG Q P T + Q + A++ R
Sbjct: 344 --------------------FMPHHPRPPAMPAGMQQLPLTHPHVPQVPAIPDIAQKEMR 383
Query: 409 VPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVS 468
PE R+ +H K+ K EDG+ T G +N +
Sbjct: 384 FPEQANRS------------------------TEFAHHPKLRKLEDGTSTP---GIVNNN 416
Query: 469 KPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSL 528
+ APSQ G + Q E ++PQ++PDVESALLQQVL LTPEQL+SL
Sbjct: 417 PAVYPAPSQGMLPGGPSGSYNSAAVSFQQPENEVPQLTPDVESALLQQVLQLTPEQLSSL 476
Query: 529 PPE 531
P E
Sbjct: 477 PVE 479
>gi|326494800|dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 243/540 (45%), Positives = 306/540 (56%), Gaps = 82/540 (15%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLV+D+ETGKPKGYGFCEYKDEETA
Sbjct: 6 AGPQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETA 65
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
LSARRNLQGYE+NGRQLRVDFAEN + D+NRE+GRGGPGM++ VD QKQL GE+
Sbjct: 66 LSARRNLQGYEVNGRQLRVDFAENGRNTDKNREKGRGGPGMSSSVDAQKQLTTTPAVGET 125
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
HQ IGL AI AA+VM G LG AQ + QNG+ Q NDPLT +LA+MSR+QL
Sbjct: 126 SLHQLIGLPPAIHAASVMAGVLGGAQTA--NVQNGLPVQFGLGNDPLTHYLARMSRHQLY 183
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQ 241
EIMSE+K + TQN + A++LL P L KALFQA IMLG+ TPQ++QM +Q P+
Sbjct: 184 EIMSELKTLTTQNNDLAKKLLQGIPQLPKALFQAHIMLGLVTPQMMQMAKSQQ----PSI 239
Query: 242 PLFQDGQ--QQVAQLPGLPPLAQKMQLMPKVQEAQIQLHN--QFSAATQPTLHPQIQLPQ 297
L Q + Q + P+ + P + Q LHN Q+ ++QP +
Sbjct: 240 SLAQSSHLNESFPQSDAVIPIVHRPPPNPNAIQEQAPLHNFPQYQHSSQPPV-------- 291
Query: 298 NAKNQALQQASLPG-QSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLENQVQVSASN 356
+ L G QSG+ HP + Q SSS+ Q PP V++
Sbjct: 292 --------KMFLHGHQSGV----LTHPPMLSQ-PFGTSSSVPTQ--PP-------VTSGG 329
Query: 357 LGQNTWTKLPNSAMRSSFL---PHPPSSDAGFQPGPSTSAGIGQTVSRDA--ERSARVPE 411
L S ++ SFL P PP Q PST+ + Q + ++ R+P+
Sbjct: 330 L---------ISQVQPSFLTQHPRPPVMPTNVQQLPSTNPHLPQVAAEPEIPQKEVRLPD 380
Query: 412 DGTRAHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVSKPI 471
R++ LD HPSK+ K EDG+ T G N + +
Sbjct: 381 ---------------------RTSHQAELD---HPSKLRKLEDGTSTP---GIANNNPAV 413
Query: 472 GSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSLPPE 531
SAPSQ + Q E + PQ++PD ESALLQQVL LTPEQL+SLP E
Sbjct: 414 YSAPSQVVVPSGPSGSYSSGAVNFQQPENEAPQLTPDDESALLQQVLQLTPEQLSSLPVE 473
>gi|357157437|ref|XP_003577798.1| PREDICTED: uncharacterized protein LOC100840159 [Brachypodium
distachyon]
Length = 477
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 244/545 (44%), Positives = 294/545 (53%), Gaps = 104/545 (19%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLV+D+ETGKPKGYGFCEYKDEETA
Sbjct: 6 AGPQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETA 65
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
LSARRNLQGYE+NGRQLRVDFAEN + DRNRE+GRGGPGMA+ VD KQ + G++
Sbjct: 66 LSARRNLQGYEVNGRQLRVDFAENGRNTDRNREKGRGGPGMASCVDAPKQPTATPVVGDT 125
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
HQP+GL AI AA+VM G LGAAQ + QNG+ Q NDPLT +LA+MSR+QL
Sbjct: 126 SLHQPVGLPPAIHAASVMAGVLGAAQTA--NVQNGLPVQYGLGNDPLTHYLARMSRHQLY 183
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQM-------PILRQ 234
E MSE+K + TQNK++A+ LL P L KALFQAQIMLGM TPQ++QM L Q
Sbjct: 184 EFMSELKTLTTQNKDRAKALLQGIPQLPKALFQAQIMLGMVTPQMMQMAKNQQLSSSLTQ 243
Query: 235 GPGHPAQPLFQDGQQQVAQLPGLPPLAQKMQLMPKVQEAQIQLHN--QFSAATQPTLHPQ 292
H L + Q A +P ++PK QE LHN Q+ ++QP
Sbjct: 244 SSAH----LNESFPQPDAVIP----------VVPK-QEPTAPLHNFPQYQHSSQPP---- 284
Query: 293 IQLPQNAKNQALQQASLPGQSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLEN--QV 350
I++ + L S +P P LA S L QV PP L +
Sbjct: 285 IKIFPHGHQYQLSSQPFSTSSSVPTQP-----------LATSGGLISQVQPPFLPQHPRP 333
Query: 351 QVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDAERS---- 406
QV +N+ Q T PH S A P + S AE +
Sbjct: 334 QVMPTNVQQLPLTN-----------PH-LSQVAAAPEIPMKEIRLPDRTSYQAELAHPSK 381
Query: 407 ARVPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALN 466
R EDGT A N VN+ PS++V SG S S GA+N
Sbjct: 382 LRKLEDGTSASGN----------------VNNNAAVYPAPSQVVVPCGPSG-SCSSGAVN 424
Query: 467 VSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLN 526
+P AP Q++PD ES LLQQVL LTPEQL+
Sbjct: 425 FQQPENEAP----------------------------QLTPDDESVLLQQVLQLTPEQLS 456
Query: 527 SLPPE 531
SLP E
Sbjct: 457 SLPIE 461
>gi|259489992|ref|NP_001159130.1| hypothetical protein [Zea mays]
gi|223942157|gb|ACN25162.1| unknown [Zea mays]
gi|413925479|gb|AFW65411.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 499
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/228 (69%), Positives = 188/228 (82%), Gaps = 2/228 (0%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A +Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETA
Sbjct: 6 AGAQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETA 65
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
LSARRNLQGYEINGRQLRVDFAE+ + DRNRE+GRGGPGMA+ VD QK+L G ++ GE+
Sbjct: 66 LSARRNLQGYEINGRQLRVDFAESGRNTDRNREKGRGGPGMASNVDSQKRLAGTSVVGET 125
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
HQP+GL AI AA+VM G LG AQ + QNG+ Q NDPLT +LA+MSR+QL+
Sbjct: 126 NFHQPVGLPPAIHAASVMAGVLGGAQTA--NVQNGLPVQYGLGNDPLTHYLARMSRHQLH 183
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQM 229
E+M+E+K + TQNKE ++ LL P L KALFQAQIMLGM TPQ++QM
Sbjct: 184 EVMAELKFLTTQNKEHSKTLLQGIPQLPKALFQAQIMLGMVTPQMMQM 231
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 66/112 (58%), Gaps = 20/112 (17%)
Query: 440 LDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSE 499
L +HPSK+ K EDG+ G +N S I +AP QA G P YS
Sbjct: 396 LTEFTHPSKLRKLEDGTSVP---GMVNSSHAIYTAPLQAVG---------PSGPSGSYSA 443
Query: 500 K----QIP----QISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
Q P QI+PDVESALLQQVL LTPEQL+SLPPEQ+QQVI+LQ+ L
Sbjct: 444 GAGSLQQPGNEGQITPDVESALLQQVLQLTPEQLSSLPPEQQQQVIELQKML 495
>gi|226528788|ref|NP_001140273.1| uncharacterized protein LOC100272317 [Zea mays]
gi|194698788|gb|ACF83478.1| unknown [Zea mays]
gi|414588427|tpg|DAA38998.1| TPA: hypothetical protein ZEAMMB73_344937 [Zea mays]
Length = 491
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/226 (70%), Positives = 186/226 (82%), Gaps = 2/226 (0%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
+Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETALS
Sbjct: 8 AQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALS 67
Query: 64 ARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVH 123
ARRNLQGYEINGRQLRVDFAEN + DRNRE+GRGGPGM + VD QKQL G ++ GE+
Sbjct: 68 ARRNLQGYEINGRQLRVDFAENGRNTDRNREKGRGGPGMTSNVDSQKQLAGTSVVGEANL 127
Query: 124 HQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEI 183
HQP+GL AI AA+VM G LG AQ + QNG+ Q NDPLT +LA+MSR+QL+E+
Sbjct: 128 HQPVGLPPAIHAASVMAGVLGGAQTA--NVQNGLPVQYGLGNDPLTHYLARMSRHQLHEV 185
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQM 229
M E+K +ATQNKEQ++ LL P L KALFQAQIMLGM TPQ++ M
Sbjct: 186 MVELKFLATQNKEQSKTLLQGIPQLPKALFQAQIMLGMVTPQMMHM 231
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 68/113 (60%), Gaps = 22/113 (19%)
Query: 440 LDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQAFG---------AGLVPVNQVP 490
L +HPSK+ K EDG+ G +N S + + P QA G AG V + Q P
Sbjct: 388 LAEFTHPSKLRKLEDGTSVP---GIVNSSHAVYTVPLQAVGPSGPSGSYSAGSVSLQQ-P 443
Query: 491 KVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
EE Q++PDVESALLQQVL LTPEQL+SLPPEQ+QQVI+LQ+ L
Sbjct: 444 GNEE---------QLTPDVESALLQQVLQLTPEQLSSLPPEQQQQVIELQKML 487
>gi|242067641|ref|XP_002449097.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
gi|241934940|gb|EES08085.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
Length = 545
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 249/614 (40%), Positives = 308/614 (50%), Gaps = 150/614 (24%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A +Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETA
Sbjct: 6 AGAQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETA 65
Query: 62 LSARRNLQGYEI-----------NGRQL-----RVD----------------FAENDKGA 89
LSARRNLQGYEI NGR +VD F+ N +
Sbjct: 66 LSARRNLQGYEINGRQLRVDFAENGRNTDRNREKVDDPQIFPVEEPFLPLLEFSVNTRSC 125
Query: 90 -----------------------DRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
GRGGPGMA+ VD QKQL G ++ GE+ HQP
Sbjct: 126 IVFVPVNDNSCAFSNHLVSPVSVSCKHVCGRGGPGMASNVDSQKQLAGTSVVGETNLHQP 185
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+GL AI AA+VM G LG AQ + QNG+ Q NDPLT +LA+MSR+QL+E+M+E
Sbjct: 186 VGLPPAIHAASVMAGVLGGAQTA--NVQNGLPVQYGLGNDPLTHYLARMSRHQLHEVMAE 243
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQP---L 243
+K + TQNKE ++ LL P L KALFQAQIMLGM TPQ++QM +Q G AQ L
Sbjct: 244 LKFLTTQNKEHSKTLLQGIPQLPKALFQAQIMLGMVTPQMMQMAKSQQPSGALAQSSSHL 303
Query: 244 FQDGQQQVAQLPGLP-PLAQKMQLMPKVQEAQIQLHN--QFSAATQP--TLHPQIQLPQN 298
+ Q A +P + PL+ ++P E LH+ Q A+QP + P
Sbjct: 304 NEPYPQPDAMIPVVSRPLSLPTNILPNPTE----LHSFPQHQHASQPPVKMFPHGHQSGI 359
Query: 299 AKNQALQQASLPGQSGIPMLPSMHPSVRPQIQLANSSSLNQQVHPPSLENQVQVSASNLG 358
A + SL G S +P LA S L QV PP +
Sbjct: 360 AAQSPILHQSLGGSSSVPTQ-----------SLATSVGLISQVQPPFVPQH--------- 399
Query: 359 QNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDAERSARVPEDGTRAHR 418
P PP Q P T + Q A +P + A +
Sbjct: 400 -----------------PGPPVMPTSVQQLPLTHPHLAQV----AAAPDILPNEIRVADQ 438
Query: 419 NNAYTNMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQA 478
AS + N P SK+ K EDG+ G +N S + +AP Q+
Sbjct: 439 -----------ASHLTEFNHP-------SKLRKLEDGTSVP---GIVNSSHAVYTAPLQS 477
Query: 479 FG---------AGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSLP 529
G AG V + Q P E Q++PDVESALLQQVL LTPEQL+SLP
Sbjct: 478 VGPSGPSGSYSAGAVSLQQ-PGNEG---------QLTPDVESALLQQVLQLTPEQLSSLP 527
Query: 530 PEQRQQVIQLQQAL 543
PEQ+QQVI+LQ+ L
Sbjct: 528 PEQQQQVIELQKML 541
>gi|413925481|gb|AFW65413.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 624
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/267 (49%), Positives = 159/267 (59%), Gaps = 56/267 (20%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A +Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETA
Sbjct: 6 AGAQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETA 65
Query: 62 LSARRNLQG------------------------------------------YEINGRQLR 79
LSARRNLQG + +N R
Sbjct: 66 LSARRNLQGYEINGRQLRVDFAESGRNTDRNREKVDNPQNYCRRAFPTTLEFSVNMRSCI 125
Query: 80 VDFAENDKGA------------DRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPI 127
V N+ GRGGPGMA+ VD QK+L G ++ GE+ HQP+
Sbjct: 126 VFVPVNNNSCAFSDHPVSPVAISYKHVCGRGGPGMASNVDSQKRLAGTSVVGETNFHQPV 185
Query: 128 GLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEM 187
GL AI AA+VM G LG AQ + QNG+ Q NDPLT +LA+MSR+QL+E+M+E+
Sbjct: 186 GLPPAIHAASVMAGVLGGAQTA--NVQNGLPVQYGLGNDPLTHYLARMSRHQLHEVMAEL 243
Query: 188 KLMATQNKEQARQLLLAKPPLLKALFQ 214
K + TQNKE ++ LL P L KALFQ
Sbjct: 244 KFLTTQNKEHSKTLLQGIPQLPKALFQ 270
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 66/112 (58%), Gaps = 20/112 (17%)
Query: 440 LDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSE 499
L +HPSK+ K EDG+ G +N S I +AP QA G P YS
Sbjct: 521 LTEFTHPSKLRKLEDGTSVP---GMVNSSHAIYTAPLQAVG---------PSGPSGSYSA 568
Query: 500 K----QIP----QISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
Q P QI+PDVESALLQQVL LTPEQL+SLPPEQ+QQVI+LQ+ L
Sbjct: 569 GAGSLQQPGNEGQITPDVESALLQQVLQLTPEQLSSLPPEQQQQVIELQKML 620
>gi|413925480|gb|AFW65412.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 118
Score = 198 bits (503), Expect = 7e-48, Method: Composition-based stats.
Identities = 90/105 (85%), Positives = 99/105 (94%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A +Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETA
Sbjct: 6 AGAQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETA 65
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIV 106
LSARRNLQGYEINGRQLRVDFAE+ + DRNRE+GRGGPGMA+ V
Sbjct: 66 LSARRNLQGYEINGRQLRVDFAESGRNTDRNREKGRGGPGMASNV 110
>gi|195649947|gb|ACG44441.1| hypothetical protein [Zea mays]
gi|414588426|tpg|DAA38997.1| TPA: hypothetical protein ZEAMMB73_344937 [Zea mays]
Length = 130
Score = 177 bits (448), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/92 (88%), Positives = 88/92 (95%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
+Q+RCVFVGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETALS
Sbjct: 8 AQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALS 67
Query: 64 ARRNLQGYEINGRQLRVDFAENDKGADRNREQ 95
ARRNLQGYEINGRQLRVDFAEN + DRNRE+
Sbjct: 68 ARRNLQGYEINGRQLRVDFAENGRNTDRNREK 99
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 128/216 (59%), Gaps = 36/216 (16%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNI Y+ +EEQL EI ++GP++SFR+V DRETGKPKGY FCEY D E ALSA RNL
Sbjct: 7 VFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAIRNL 66
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIG 128
G E+NGR LRVD A++DK ++LG A + E+ ++ P
Sbjct: 67 NGTELNGRTLRVDLADSDK----------------------RELGQSAANMETGNNNPS- 103
Query: 129 LHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMK 188
TA+ + GAL + G N G+ S L + L ++S Q++EIM +MK
Sbjct: 104 -----TASNMKAGALNTS--GGTGNIQGL-SNLGAKGS-----LEQLSCQQIHEIMLQMK 150
Query: 189 LMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
+A QN EQ RQLLLA P L AL Q QIMLG+A P
Sbjct: 151 ALAQQNPEQVRQLLLANPQLTYALLQGQIMLGLAPP 186
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQP 550
++ALLQ +++LTP +L SLPPEQR QV+QL+ L QP
Sbjct: 239 QAALLQNIINLTPAELESLPPEQRAQVLQLKATLGAQMGQP 279
>gi|414588425|tpg|DAA38996.1| TPA: hypothetical protein ZEAMMB73_344937, partial [Zea mays]
Length = 163
Score = 164 bits (416), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/87 (87%), Positives = 82/87 (94%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+ VGNIPYDATEEQL++IC EVGPVVSFRLVID+ETGKPKGYGFCEYKDEETALSARRNL
Sbjct: 46 ITVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 105
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQ 95
QGYEINGRQLRVDFAEN + DRNRE+
Sbjct: 106 QGYEINGRQLRVDFAENGRNTDRNREK 132
>gi|452823774|gb|EME30782.1| mRNA splicing factor, putative isoform 2 [Galdieria sulphuraria]
Length = 308
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 130/227 (57%), Gaps = 43/227 (18%)
Query: 5 QHRCVF-------VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKD 57
QH ++ VGNI Y+ +EEQL EI ++GP++SFR+V DRETGKPKGY FCEY D
Sbjct: 13 QHNILYKTTNFDQVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPD 72
Query: 58 EETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAI 117
E ALSA RNL G E+NGR LRVD A++DK ++LG A
Sbjct: 73 AEMALSAIRNLNGTELNGRTLRVDLADSDK----------------------RELGQSAA 110
Query: 118 HGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSR 177
+ E+ ++ P TA+ + GAL + G N G+ S L + L ++S
Sbjct: 111 NMETGNNNPS------TASNMKAGALNTS--GGTGNIQGL-SNLGAKGS-----LEQLSC 156
Query: 178 NQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
Q++EIM +MK +A QN EQ RQLLLA P L AL Q QIMLG+A P
Sbjct: 157 QQIHEIMLQMKALAQQNPEQVRQLLLANPQLTYALLQGQIMLGLAPP 203
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQP 550
++ALLQ +++LTP +L SLPPEQR QV+QL+ L QP
Sbjct: 256 QAALLQNIINLTPAELESLPPEQRAQVLQLKATLGAQMGQP 296
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 124/225 (55%), Gaps = 51/225 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPV+SFRLV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 18 RSVFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKGYGFCEYKDQETALSAMR 77
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G+E+NGRQLRVD A ++K + ++ GP Q+ GP + E
Sbjct: 78 NLNGHELNGRQLRVDNAASEKSKEELKQLTVAGPS-------QESPYGPPVQPEDAPE-- 128
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
AI+ A +A + Q+ E+M +
Sbjct: 129 -----AISQA-----------------------------------VASLPPEQMFELMKQ 148
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMAT--PQVLQM 229
MKL N ++AR +LL P L AL QAQ+++ +A QVLQ+
Sbjct: 149 MKLCIQNNPQEARNMLLQNPQLAYALLQAQVVMRIAALIMQVLQL 193
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 5/41 (12%)
Query: 511 SALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
+AL+ QVL L+PEQ+ LPPEQRQ ++ +L++Q+Q S
Sbjct: 184 AALIMQVLQLSPEQIAMLPPEQRQSIM-----ILKEQIQSS 219
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 129/225 (57%), Gaps = 51/225 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 15 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMR 74
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYE+NGRQLRVD A ++K N+E+ + I+ Q GP + ES +P
Sbjct: 75 NLSGYELNGRQLRVDNAASEK----NKEELK-------IL----QASGPPV--ESPFGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
A TA ++ +A + Q+ E+M +
Sbjct: 118 CSPDEAPTA--------------------------------ISKAVASLPPEQMYELMKQ 145
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMAT--PQVLQM 229
MK++ N +AR +LL P L AL QAQ+++ +A QVLQ+
Sbjct: 146 MKMVIQNNPVEARNMLLQNPQLAYALLQAQVVMRIAALIMQVLQL 190
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 511 SALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQP 550
+AL+ QVL LTPEQ+ LPP+QRQ ++ L++ + R P
Sbjct: 181 AALIMQVLQLTPEQVAMLPPDQRQSIMILKEQIARSTGHP 220
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 124/235 (52%), Gaps = 47/235 (20%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEYKD+ETA
Sbjct: 11 AERSVRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETA 70
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
LSA RNL +++NGR LRVD A ++K + + + Q LGGP +
Sbjct: 71 LSAMRNLNAFDLNGRPLRVDNAASEKSKEE-------------LKNLQASLGGPPV---- 113
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
P G + A + ++ +A + Q+
Sbjct: 114 --ESPYGAEVEPERAP----------------------------EAISKAVASLPPEQMF 143
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGP 236
E+M +MKL N +AR +LL P L AL QAQ+++ + PQV + RQ P
Sbjct: 144 ELMKQMKLCIQNNPGEARNMLLQNPQLAYALLQAQVIMKVVEPQVALSILHRQNP 198
>gi|402221238|gb|EJU01307.1| hypothetical protein DACRYDRAFT_116497 [Dacryopinax sp. DJM-731
SS1]
Length = 320
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 121/233 (51%), Gaps = 33/233 (14%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA R VFVGNIPY TEE LIE+ R VGPVV FRLV DRETGKPKGYGFCE+ D ET
Sbjct: 1 MAHPDSRVVFVGNIPYGMTEEALIEVFRTVGPVVGFRLVFDRETGKPKGYGFCEFPDHET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A+SA RNL GYE+ GR LRVD AE+D P + G+
Sbjct: 61 AMSAVRNLHGYEVQGRPLRVDIAESD----------------------------PMVEGK 92
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASP-----NDPLTLHLAKM 175
+ H I +A G G + + N + S ++ P D ++ LA +
Sbjct: 93 TTHQGVINERDVRADSAGHGGRWGPPKNDFANFMNDLPSGVSIPPGKSSLDVISQALASI 152
Query: 176 SRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
QL + +++MK ++AR LL+A P L A FQA +M + P +L+
Sbjct: 153 PHPQLMQTLNQMKAYVGNYPDRARALLVAHPQLSYAFFQAMLMNKIVDPAILE 205
>gi|308799677|ref|XP_003074619.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116000790|emb|CAL50470.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 318
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+GN+PYDATE L EI E GPV RLV +R+TGK KGYGF E+ D TA+SA RNL
Sbjct: 6 VFIGNVPYDATEASLTEIFCECGPVRELRLVTERDTGKLKGYGFVEFDDFATAMSAVRNL 65
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE-SVHHQPI 127
G E NGRQLRVD AE K GG Q G AIHG+ V H
Sbjct: 66 NGREYNGRQLRVDHAETMKNG--------GG-----------QTGVSAIHGDGGVGHAAP 106
Query: 128 GLHIAITAAA-VMTGALGAAQVGVQSNQNG-IQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
+++ A A + T A A+Q G++ G + S + D LT +A ++ QL EIMS
Sbjct: 107 SASVSLRADAPIGTNAAKASQQGMRHAFEGVVTSTTGAAMDLLTKRVADLTPTQLYEIMS 166
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
++K M + QAR LL+ P L ALFQAQ++LGM P
Sbjct: 167 QVKQMTESDPAQARTLLVNNPQLSLALFQAQLVLGMVKP 205
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 502 IPQISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQ 541
+P D + ALL+QVLS+TP+Q+ LPP+QR QV L+Q
Sbjct: 267 VPGQGMDQQQALLRQVLSMTPQQIAMLPPDQRAQVEYLRQ 306
>gi|430812117|emb|CCJ30453.1| unnamed protein product [Pneumocystis jirovecii]
Length = 258
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 127/245 (51%), Gaps = 52/245 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGNIPYD +EEQL +I R++GP+ FRLV D+ET KPKGYGFCEY D TA +A R
Sbjct: 8 KVVFVGNIPYDVSEEQLKDIFRQIGPINRFRLVFDKETNKPKGYGFCEYPDVATASAAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL ++INGRQLRVDFAE+D D NR Q + SV H+
Sbjct: 68 NLNNHDINGRQLRVDFAESDPAQDNNRRQQQS----------------------SVQHE- 104
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGI-----QSQLASPN----DPLTLHLAKMSR 177
+ +Q N++ I Q + P D ++ L+ +
Sbjct: 105 --------------------EPSLQQNKSDILPPLPQGTMPQPGISVIDAISRTLSTLPP 144
Query: 178 NQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPG 237
QL +I+S++K + N EQA LLL P L A+FQA +M+ + VLQ + G
Sbjct: 145 LQLLDIISQLKALVHINPEQAHALLLQSPQLSYAVFQAMLMMNLVEASVLQRVVASTGLP 204
Query: 238 HPAQP 242
P+QP
Sbjct: 205 QPSQP 209
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 123/231 (53%), Gaps = 55/231 (23%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQ 234
M +MKL + ++AR +LL P L AL QAQ+++ + P++ + RQ
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 194
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 122/220 (55%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I+ ES + P
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDP 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ S ++ +S ++ +A + Q+ E+M +
Sbjct: 119 V------------------------SPEDAPES--------ISRAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 147 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 5/42 (11%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
++AL+ QVL LTP+Q+ LPPEQRQ ++ +L++Q+Q S
Sbjct: 478 KAALIMQVLQLTPDQIAMLPPEQRQSIL-----ILKEQIQKS 514
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 160/319 (50%), Gaps = 69/319 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I+ ES + P
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDP 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ S ++ +S ++ +A + Q+ E+M +
Sbjct: 119 V------------------------SPEDAPES--------ISRAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPA-QPLFQ 245
MKL + ++AR +LL P L AL QAQ+++ + P++ + IL + PA P
Sbjct: 147 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI-ALKILHR----PAVVPPMM 201
Query: 246 DGQQQVAQLPGLPPLAQKMQLMPKVQEAQIQ----LHNQFSAATQPTLHPQIQLPQNAKN 301
QQ Q P + PL Q P V Q Q +H + TL Q +P N
Sbjct: 202 SNNQQPGQGPNM-PLNQ-----PNVPVGQPQPMGAMHVNGAPPMMQTLPMQGGVPAPMGN 255
Query: 302 QA----LQQASLPGQSGIP 316
A LQ +LP Q GIP
Sbjct: 256 PAPGPVLQGGALPPQVGIP 274
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 5/42 (11%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
++AL+ QVL LTP+Q+ LPPEQRQ ++ +L++Q+Q S
Sbjct: 458 KAALIMQVLQLTPDQIAMLPPEQRQSIL-----ILKEQIQKS 494
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 122/220 (55%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I+ ES + P
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDP 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ S ++ +S ++ +A + Q+ E+M +
Sbjct: 119 V------------------------SPEDAPES--------ISRAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 147 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 5/42 (11%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
++AL+ QVL LTP+Q+ LPPEQRQ ++ +L++Q+Q S
Sbjct: 458 KAALIMQVLQLTPDQIAMLPPEQRQSIL-----ILKEQIQKS 494
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 122/220 (55%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I+ ES + P
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDP 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ S ++ +S ++ +A + Q+ E+M +
Sbjct: 119 V------------------------SPEDAPES--------ISRAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 147 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 5/42 (11%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
++AL+ QVL LTP+Q+ LPPEQRQ ++ +L++Q+Q S
Sbjct: 457 KAALIMQVLQLTPDQIAMLPPEQRQSIL-----ILKEQIQKS 493
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GES+
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGESI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|391347243|ref|XP_003747874.1| PREDICTED: cleavage stimulation factor subunit 2-like [Metaseiulus
occidentalis]
Length = 422
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 124/231 (53%), Gaps = 53/231 (22%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIPYDATEEQL I EVGPVV+FRLV DRETGKPKGYGFCE+KD+ETA+SA RNL
Sbjct: 20 VFVGNIPYDATEEQLKTIFEEVGPVVNFRLVYDRETGKPKGYGFCEFKDQETAMSAMRNL 79
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGP---AIHGESVHHQ 125
+EI GR LRVD A ++RN+E+ + A+ Q GGP ++GE H
Sbjct: 80 NSFEIGGRALRVDHA----ASERNKEE------LKALY---AQYGGPPAEPMYGEETDHN 126
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
+P + ++ +A + Q+ ++M
Sbjct: 127 ------------------------------------KTP-EAISKAVASLPPEQMFQLMK 149
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGP 236
+MK N +AR LLL P L AL QAQ+++ + PQV + RQ P
Sbjct: 150 QMKTCIQNNPNEARNLLLQNPQLAYALLQAQVIMKIVDPQVALSILHRQNP 200
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 122/220 (55%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I+ ES + P
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDP 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
I S ++ +S ++ +A + Q+ E+M +
Sbjct: 119 I------------------------SPEDAPES--------ISRAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 147 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 15 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 74
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 75 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 119 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 143 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 185
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 14 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 73
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 74 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 118 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 141
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 142 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 184
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|302782275|ref|XP_002972911.1| hypothetical protein SELMODRAFT_8465 [Selaginella moellendorffii]
gi|302812663|ref|XP_002988018.1| hypothetical protein SELMODRAFT_8471 [Selaginella moellendorffii]
gi|300144124|gb|EFJ10810.1| hypothetical protein SELMODRAFT_8471 [Selaginella moellendorffii]
gi|300159512|gb|EFJ26132.1| hypothetical protein SELMODRAFT_8465 [Selaginella moellendorffii]
Length = 79
Score = 152 bits (385), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/79 (87%), Positives = 75/79 (94%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V VGNIPYDATEEQLI+IC EVGPVVSFRLV DRETGKPKGYGFCE++DEETALSARRNL
Sbjct: 1 VAVGNIPYDATEEQLIQICEEVGPVVSFRLVTDRETGKPKGYGFCEFRDEETALSARRNL 60
Query: 69 QGYEINGRQLRVDFAENDK 87
GY++NGRQLRVDFAEN+K
Sbjct: 61 SGYDLNGRQLRVDFAENEK 79
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 123/231 (53%), Gaps = 55/231 (23%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQ 234
M +MKL + ++AR +LL P L AL QAQ+++ + P++ + RQ
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 194
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 113/220 (51%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 12 RSVFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMR 71
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K + G P + G A+ E
Sbjct: 72 NLNGYEIGGRTLRVDNACTEKSRLEMQSLMMGMPT-------SENHYGEAVSAEKAPE-- 122
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
AI+ A +A + Q+ E+M +
Sbjct: 123 -----AISTA-----------------------------------VASLPPEQMYELMKQ 142
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MK N +AR +LL P L AL QAQI++ + PQV
Sbjct: 143 MKACIQNNPTEARNMLLQNPQLGYALLQAQIIMKIVDPQV 182
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 119/220 (54%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I+ ES + P
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDP 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ A + ++ +A + Q+ E+M +
Sbjct: 119 VNPEDAPES--------------------------------ISRAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 147 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 119/220 (54%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I+ ES + P
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDP 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ A + ++ +A + Q+ E+M +
Sbjct: 119 VNPEDAPES--------------------------------ISRAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 147 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 130/242 (53%), Gaps = 52/242 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I++ + +G+SV QP
Sbjct: 89 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP----IIE--------SPYGDSV--QP 134
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+I+ A +A + Q+ E+M +
Sbjct: 135 EEAPESISRA-----------------------------------VASLPPEQMFELMKQ 159
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPLFQD 246
MKL + ++AR +LL P L AL QAQ+++ + P++ + RQ QPL
Sbjct: 160 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKMLHRQ---TTVQPLIPS 216
Query: 247 GQ 248
GQ
Sbjct: 217 GQ 218
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQ 549
++AL+ QVL LTPEQ+ LPPEQRQ ++ +L++Q+Q
Sbjct: 437 KAALIMQVLQLTPEQIAMLPPEQRQSIL-----ILKEQIQ 471
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 131/248 (52%), Gaps = 62/248 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESV--HH 124
NL G E +GR LRVD A ++K + + G G P I++ + +G++V H
Sbjct: 89 NLNGREFSGRALRVDNAASEKNKEELKSLGTGSP----IIE--------SPYGDTVQPHE 136
Query: 125 QPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIM 184
P + A+ A + Q+ E+M
Sbjct: 137 APESISRAV---------------------------------------ASLPPEQMFELM 157
Query: 185 SEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV-LQM--------PILRQG 235
+MKL + ++AR +LL P L AL QAQ+++ + P++ L+M P++ G
Sbjct: 158 KQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKMLHRQTSVQPLISSG 217
Query: 236 PGHPAQPL 243
P A P+
Sbjct: 218 PAGGAPPV 225
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQ 549
++AL+ QVL LTPEQ+ LPPEQRQ ++ +L++Q+Q
Sbjct: 457 KAALIMQVLQLTPEQIAMLPPEQRQSIL-----ILKEQIQ 491
>gi|255638599|gb|ACU19606.1| unknown [Glycine max]
Length = 299
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 182/325 (56%), Gaps = 48/325 (14%)
Query: 245 QDGQQQVAQ-LPGLPPLAQKMQ--LMPKVQEAQIQL--HN-----QFSAATQPTLHPQIQ 294
Q GQ + Q L GLP K+Q L P QE Q+ HN Q +A +P + P+I
Sbjct: 5 QLGQASLVQTLSGLPHGQDKLQPGLTPYAQEGQVNTIPHNPLVPSQLTAHPKPPVQPRIP 64
Query: 295 LPQNAKNQALQQASLPGQSGIPMLPSMHP------SVRPQIQLANSSSLNQQVHPPSLEN 348
L QN N L +L GQS + MLPS SVRP IQLA S++LNQQ+H L++
Sbjct: 65 LQQNPNNLVLP-GTLSGQSNL-MLPSARSPGLGSLSVRPPIQLATSTALNQQMHASLLQH 122
Query: 349 QVQVSASNLGQNTWTKLPNSAMRSSFLPHPPSSDAGFQPGPSTSAGIGQTVSRDAERSAR 408
V V S +G N +PGPS S Q +S+ ++S++
Sbjct: 123 SVHVGNSTVGHNVQ-----------------------KPGPSMSTTNSQLLSK-GDKSSK 158
Query: 409 VPEDGTRAHRNNAYT--NMSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALN 466
V ED A R N Y+ N+ +G+ K + V D +S + PSK++K ++G T S G L+
Sbjct: 159 VIEDLNWAKRTNTYSKSNIPLGV-EKTNMVRDSSESFTRPSKVMKLDEGRSTPLSAGILD 217
Query: 467 VSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLN 526
+ P+ S G +PV+ PK E QYSE+Q Q+ PDVES LLQQVL+LTPEQL+
Sbjct: 218 M--PVTDGSSHILGRSSLPVHAAPKAEG-QYSEQQSFQLPPDVESVLLQQVLNLTPEQLS 274
Query: 527 SLPPEQRQQVIQLQQALLRDQMQPS 551
SLPP+Q+QQV+QLQQAL RDQ+QPS
Sbjct: 275 SLPPDQQQQVLQLQQALRRDQIQPS 299
>gi|357627631|gb|EHJ77269.1| hypothetical protein KGM_03087 [Danaus plexippus]
Length = 425
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 116/218 (53%), Gaps = 50/218 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 6 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 65
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q + GP + E+ + P
Sbjct: 66 NLNGYEIGGRSLRVDNACTEKSR----------------MEMQALMQGPQV--ENPYGDP 107
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ A A ++ +A + Q+ E+M +
Sbjct: 108 VDPEKAPEA--------------------------------ISKAVATLPPEQMFELMKQ 135
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
MKL N +AR +LL P L AL QAQ+++ + P
Sbjct: 136 MKLCIQNNPTEARNMLLQNPQLAYALLQAQVIMRIVDP 173
>gi|332026262|gb|EGI66401.1| Cleavage stimulation factor 64 kDa subunit [Acromyrmex echinatior]
Length = 480
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 116/218 (53%), Gaps = 50/218 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K R Q + G+S + P
Sbjct: 77 NLNGYEIGGRTLRVDNACTEKS--RMEMQS-------------------LLQGQSTEN-P 114
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G +QS A + ++ +A + Q+ E+M +
Sbjct: 115 YG--------------------------EAVQSDKAP--EAISKAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 147 MKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDP 184
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 125/247 (50%), Gaps = 64/247 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ--------VLQMPILRQG 235
M +MKL N +ARQ+L+ P L AL QA +++ + PQ QMP + G
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVLGG 202
Query: 236 PGHPAQP 242
HP P
Sbjct: 203 SAHPNAP 209
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 119/223 (53%), Gaps = 55/223 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V VGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI---- 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
SP D ++ +A + Q+ E+
Sbjct: 120 ------------------------------------SPEDAPESISKAVASLPPEQMFEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 186
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 125/247 (50%), Gaps = 64/247 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ--------VLQMPILRQG 235
M +MKL N +ARQ+L+ P L AL QA +++ + PQ QMP + G
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVLGG 202
Query: 236 PGHPAQP 242
HP P
Sbjct: 203 SAHPNAP 209
>gi|102269210|gb|ABF55966.2| cleavage stimulation factor 64-kDa subunit [Bombyx mori]
Length = 326
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 116/218 (53%), Gaps = 50/218 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 18 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 77
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q + GP + E+ + P
Sbjct: 78 NLNGYEIGGRSLRVDNACTEKSR----------------MEMQALMQGPQV--ENPYGDP 119
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ A A ++ +A + Q+ E+M +
Sbjct: 120 VEPEKAPEA--------------------------------ISKAVATLPPEQMXELMKQ 147
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
MKL N +AR +LL P L AL QAQ+++ + P
Sbjct: 148 MKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDP 185
>gi|168013166|ref|XP_001759272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689585|gb|EDQ75956.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 149 bits (376), Expect = 3e-33, Method: Composition-based stats.
Identities = 66/73 (90%), Positives = 71/73 (97%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
VGNIPYDATEEQL+ IC EVGPVV+FRLV+DRETGKPKGYGFCE++DEETALSARRNLQG
Sbjct: 1 VGNIPYDATEEQLVHICEEVGPVVNFRLVLDRETGKPKGYGFCEFRDEETALSARRNLQG 60
Query: 71 YEINGRQLRVDFA 83
YEINGRQLRVDFA
Sbjct: 61 YEINGRQLRVDFA 73
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 128/241 (53%), Gaps = 52/241 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 26 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 85
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P I++ + +G+SV Q
Sbjct: 86 NLNGREFSGRALRVDNAASEKNKEELKSLGTGSP----IIE--------SPYGDSVQPQ- 132
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+P ++ +A + Q+ E+M +
Sbjct: 133 -----------------------------------EAPES-ISRAVASLPPEQMFELMKQ 156
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPLFQD 246
MKL + ++AR +LL P L AL QAQ+++ + P++ + RQ QPL
Sbjct: 157 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKMLHRQ---SSVQPLISS 213
Query: 247 G 247
G
Sbjct: 214 G 214
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 114/220 (51%), Gaps = 47/220 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+A+EEQL E+ ++ GPV+SFRLV DRETGKPKGYGFCEY+D ETA SA R
Sbjct: 24 RSVFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRETGKPKGYGFCEYQDVETAQSAMR 83
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL Y+ NGR LRV A ++ D N+ Q+ +GGP I P
Sbjct: 84 NLNNYDYNGRPLRVGVAAGEQSKDENKSM-------------QQAVGGPVI------ESP 124
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G I A + ++ +A + Q+ E+M +
Sbjct: 125 FGDAIDPNEAP----------------------------ESISKAVASLPPEQMFELMKQ 156
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL N +AR +LL P L AL Q QI++ + PQV
Sbjct: 157 MKLCIQNNPNEARNMLLQNPQLAYALLQGQIVMKIVDPQV 196
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 113/218 (51%), Gaps = 47/218 (21%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEYKD+ETA
Sbjct: 11 AERSVRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETA 70
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
LSA RNL +++NGR LRVD A ++K + + + Q LGGP I
Sbjct: 71 LSAMRNLNAFDLNGRPLRVDNAASEKSKEE-------------LKNLQASLGGPPI---- 113
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
P G + A + ++ +A + Q+
Sbjct: 114 --ESPYGPEVEPERAP----------------------------EAISKAVASLPPEQMF 143
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIML 219
E+M +MKL N +AR +LL P L AL Q+ L
Sbjct: 144 ELMKQMKLCIQNNPGEARNMLLQNPQLAYALLXPQVAL 181
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPA--------AP 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 118/220 (53%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P + P
Sbjct: 89 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---------------------IIESP 127
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G +G+ + A + ++ +A + Q+ E+M +
Sbjct: 128 YG--------------------------DGVPPEEAP--ESISRAVASLPPEQMFELMKQ 159
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 160 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 199
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 50 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 109
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 110 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 139
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 140 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 174
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 175 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 220
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 6 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 65
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 66 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 95
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 96 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 130
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 131 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 176
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPA--------AP 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 118/222 (53%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P+D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CDPDDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 118/220 (53%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K + + G G P + P
Sbjct: 89 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---------------------IIESP 127
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G +G+ + A + ++ +A + Q+ E+M +
Sbjct: 128 YG--------------------------DGVPPEEAP--ESISRAVASLPPEQMFELMKQ 159
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 160 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 199
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 118/222 (53%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P+D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CDPDDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 27 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 86
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 87 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 116
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 117 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 151
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 152 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 197
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 28 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 87
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 88 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 118 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 152
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 153 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 198
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG A P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLGPAA---------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
AA + I S P DP +T +A + Q+
Sbjct: 106 -------PAAPI------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 119/226 (52%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG A P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLGPAA---------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 118/222 (53%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P+D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CDPDDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 121/220 (55%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 24 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 83
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 84 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
T A ++ G +G + A + ++ +A + Q+ E+M +
Sbjct: 114 -------TGAPIIESPYG----------DGCMPEEAP--ESISRAVASLPPEQMFELMKQ 154
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 155 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 194
>gi|307202383|gb|EFN81811.1| Cleavage stimulation factor 64 kDa subunit [Harpegnathos saltator]
Length = 439
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 118/220 (53%), Gaps = 50/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRV ++ +++R + + + G++ + P
Sbjct: 77 NLNGYEIGGRTLRV----DNACTEKSRMEMQS-----------------LLQGQNTEN-P 114
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G +QS A + ++ +A + Q+ E+M +
Sbjct: 115 YG--------------------------EAVQSDKAP--EAISKAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 147 MKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDPHT 186
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 121/220 (55%), Gaps = 49/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 24 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 83
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K LG
Sbjct: 84 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSLG------------- 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
T A ++ G +G + A + ++ +A + Q+ E+M +
Sbjct: 114 -------TGAPIIESPYG----------DGCMPEEAP--ESISRAVASLPPEQMFELMKQ 154
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 155 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 194
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 117/222 (52%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|281354415|gb|EFB29999.1| hypothetical protein PANDA_019778 [Ailuropoda melanoleuca]
Length = 568
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 117/220 (53%), Gaps = 55/220 (25%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
VGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 64
Query: 70 GYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGL 129
G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 65 GREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI------- 105
Query: 130 HIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEIMSE 186
SP D ++ +A + Q+ E+M +
Sbjct: 106 ---------------------------------SPEDAPESISKAVASLPPEQMFELMKQ 132
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 133 MKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 172
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 117/222 (52%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|270000744|gb|EEZ97191.1| hypothetical protein TcasGA2_TC004378 [Tribolium castaneum]
Length = 409
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 116/220 (52%), Gaps = 50/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVG V+SF+LV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 14 RSVFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMR 73
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q L P + E+ + +P
Sbjct: 74 NLNGYEIGGRNLRVDNACTEKSR----------------MEMQNLLNQPPV--ENPYGEP 115
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
I A A ++ +A + Q+ E+M +
Sbjct: 116 IQAEKAPEA--------------------------------ISKAVASLPPEQMFELMKQ 143
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 144 MKLCIQNNPTEARQMLLQNPQLAYALLQAQVVMRIIDPHT 183
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 117/222 (52%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 77 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 119 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 143
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 144 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 185
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 117/222 (52%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 117/222 (52%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|350401751|ref|XP_003486249.1| PREDICTED: cleavage stimulation factor subunit 2-like [Bombus
impatiens]
Length = 441
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 118/220 (53%), Gaps = 50/220 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRV ++ +++R + + + G++ + P
Sbjct: 77 NLNGYEIGGRTLRV----DNACTEKSRMEMQS-----------------LLQGQNTEN-P 114
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G +QS A + ++ +A + Q+ E+M +
Sbjct: 115 YG--------------------------EAVQSDKAP--EAISKAVASLPPEQMFELMKQ 146
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 147 MKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDPHT 186
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 117/222 (52%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 117/222 (52%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 117/222 (52%), Gaps = 56/222 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L EI EVGPV+S +LV DRE+GKPKG+GFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q+ L GP + E+ + +P
Sbjct: 76 NLNGYEIGGRTLRVDNACTEKSR----------------MEMQQLLQGPQV--ENPYGEP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEI 183
P D +T +A + Q+ E+
Sbjct: 118 -----------------------------------CEPEDAPELITKTVASLPPEQMYEL 142
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
M +MKL N +ARQ+L+ P L AL QA +++ + PQ
Sbjct: 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQ 184
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 119/218 (54%), Gaps = 47/218 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I GPVVSFRLV DRE+GKPKGYGFCE++D+ETALSA R
Sbjct: 13 RSVFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETALSAMR 72
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYE+NGR LRVD A ++K D + GG G+A P+++G++V +
Sbjct: 73 NLSGYELNGRSLRVDSAASEKDKDLPLQMPAGGGGLAE----------PSMYGDAVPMEE 122
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ I + +QS + Q+ E+M +
Sbjct: 123 VPEVI----------------------KKSVQS---------------LPPEQMFELMVQ 145
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
MK + ++ R++LL P L AL QA +++ + P
Sbjct: 146 MKESIHKYPDETRRMLLQNPQLAYALLQALVVMKVVDP 183
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 120/226 (53%), Gaps = 61/226 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVG+IPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 186
>gi|395547925|ref|XP_003775192.1| PREDICTED: cleavage stimulation factor subunit 2 [Sarcophilus
harrisii]
Length = 556
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 129/248 (52%), Gaps = 53/248 (21%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
VGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL G
Sbjct: 5 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 64
Query: 71 YEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLH 130
E +GR LRVD A ++K + + G G P I+ ES + PI
Sbjct: 65 REFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDPI--- 104
Query: 131 IAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLM 190
S ++ +S ++ +A + Q+ E+M +MKL
Sbjct: 105 ---------------------SPEDAPES--------ISRAVASLPPEQMFELMKQMKLC 135
Query: 191 ATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPLFQDGQQQ 250
+ ++AR +LL P L AL QAQ+++ + P++ + RQ P G Q
Sbjct: 136 VQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQA----NIPSLIQGNPQ 191
Query: 251 VAQLPGLP 258
Q PG P
Sbjct: 192 PGQGPGAP 199
>gi|91094479|ref|XP_970762.1| PREDICTED: similar to cleavage stimulation factor 64-kDa subunit
[Tribolium castaneum]
Length = 424
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 116/218 (53%), Gaps = 50/218 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVG V+SF+LV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 14 RSVFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMR 73
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q L P + E+ + +P
Sbjct: 74 NLNGYEIGGRNLRVDNACTEKSR----------------MEMQNLLNQPPV--ENPYGEP 115
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
I A A ++ +A + Q+ E+M +
Sbjct: 116 IQAEKAPEA--------------------------------ISKAVASLPPEQMFELMKQ 143
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 144 MKLCIQNNPTEARQMLLQNPQLAYALLQAQVVMRIIDP 181
>gi|321479154|gb|EFX90110.1| hypothetical protein DAPPUDRAFT_299933 [Daphnia pulex]
Length = 381
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 117/232 (50%), Gaps = 51/232 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPYD TEE+L +I E GPVVSF++V DRETGKPKGYGFCEY+D+ETAL A R
Sbjct: 14 RSVFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFCEYRDQETALCAMR 73
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K +L ++ E P
Sbjct: 74 NLNGYEIAGRTLRVDNACTEK----------------------SRLEMQSLMQEKTTESP 111
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G + T A M ++ ++ + Q+ E+M +
Sbjct: 112 YGDAVDPTQAPEM----------------------------ISKAVSSLPPEQMFELMQQ 143
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGH 238
MK N +ARQ+LL P L AL QA +++ + P + +L++GPG
Sbjct: 144 MKQCMQNNPNEARQMLLQNPQLAYALLQALVVIRVVDPST-ALSMLQKGPGQ 194
>gi|338729372|ref|XP_001492640.3| PREDICTED: cleavage stimulation factor subunit 2 [Equus caballus]
Length = 601
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 119/227 (52%), Gaps = 59/227 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVS----FRLVIDRETGKPKGYGFCEYKDEETAL 62
R VFVGNIPY+ATEEQL ++ EVGPVVS RLV DRETGKPKGYGFCEY+D+ETAL
Sbjct: 16 RSVFVGNIPYEATEEQLKDVFSEVGPVVSSGRVIRLVYDRETGKPKGYGFCEYQDQETAL 75
Query: 63 SARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESV 122
SA RNL G E +GR LRVD A ++K + + G G P I P +GE++
Sbjct: 76 SAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAP---VIESP---------YGETI 123
Query: 123 HHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQ 179
SP D ++ +A + Q
Sbjct: 124 ----------------------------------------SPEDAPESISKAVASLPPEQ 143
Query: 180 LNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
+ E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 144 MFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEI 190
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 119/233 (51%), Gaps = 47/233 (20%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
+S++ R VFVGNIPYD TE+ L EI E G VV+FRLV DRETGKPKGYGFCEY D TA
Sbjct: 8 SSAKERSVFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATA 67
Query: 62 LSARRNLQGYEINGRQLRVDFAE-NDK--GADRNREQGRGGPGMAAIVDPQKQLGGPAIH 118
LSA RNL GYEINGR LRVDFA+ DK GADR R H
Sbjct: 68 LSAMRNLNGYEINGRNLRVDFADGGDKSGGADRKR------------------------H 103
Query: 119 GESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRN 178
H + H + + G + + + I + + +A++
Sbjct: 104 DNGSHAR----HGGTSGSNFRNGGSDGGPPTMVTGEMAIHA--------IESAIARLGPV 151
Query: 179 QLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPI 231
+L +++ ++K A Q E + +L+A P L A+ Q+ + LQ+PI
Sbjct: 152 KLYDMLVQLKEHARQKPEVTKSILMANPALTHAIVQSF--------KTLQIPI 196
>gi|409078041|gb|EKM78405.1| hypothetical protein AGABI1DRAFT_114691 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 341
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 125/227 (55%), Gaps = 35/227 (15%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGN+PY+ E+QLI++ + VG V+ FRLV DRETGKP+GYGFCE+ D ETALSA R
Sbjct: 3 KVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSAVR 62
Query: 67 NLQGYEINGRQLRVDFAEND-----KGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
NL ++ GR LR+D A++D K R G PG A +P+++ GG G+
Sbjct: 63 NLNNVDVGGRPLRIDLADSDPFLEGKTTVRGELVDGGYPGPA---EPRQRGGGRGHDGDF 119
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
+ P+G+ I A+ D ++ LAKM +QL
Sbjct: 120 LSQVPLGVPIPKGTKAL---------------------------DHISTTLAKMQPSQLM 152
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
E++++MK + +QARQLL+ P L ALFQ ++ + P +LQ
Sbjct: 153 EVLAQMKAFIITHPDQARQLLVKHPQLSYALFQGLLLNNIVDPAILQ 199
>gi|157137809|ref|XP_001664044.1| RNA-binding protein [Aedes aegypti]
gi|108869641|gb|EAT33866.1| AAEL013869-PA [Aedes aegypti]
Length = 399
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 115/224 (51%), Gaps = 62/224 (27%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVGPV+S +LV DRE+GKPKGYGFCEYKD+ETALSA R
Sbjct: 14 RSVFVGNIPYEATEEKLKDIFCEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMR 73
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K +R + MAA+ L GP I P
Sbjct: 74 NLNGYEIGGRALRVDNACTEK----SRME------MAAL------LQGPQIDN------P 111
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPL------TLHLAKMSRNQL 180
G P DPL T + + Q+
Sbjct: 112 YG----------------------------------DPCDPLMAPEIVTKTVVSLPPEQM 137
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
E+M +MK N +AR +LL P L AL QAQ+++ + P
Sbjct: 138 YELMKQMKTCFQNNPVEARNMLLQNPQLAYALLQAQVVMRIVDP 181
>gi|405953650|gb|EKC21271.1| Cleavage stimulation factor 64 kDa subunit [Crassostrea gigas]
Length = 482
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 114/216 (52%), Gaps = 47/216 (21%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
+GNIPY+ TEEQL EI GPVVSFRLV DRETGKPKGYGFCEY+D ETA SA RNL
Sbjct: 53 IGNIPYETTEEQLREIFSAAGPVVSFRLVYDRETGKPKGYGFCEYQDVETAQSAMRNLNN 112
Query: 71 YEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLH 130
Y+ NGR LRV A ++NR++ +G Q+ LGGP + ES + P+
Sbjct: 113 YDFNGRPLRVGVA----AGEQNRDEMKGL---------QQALGGPIM--ESPYGDPVEPE 157
Query: 131 IAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLM 190
A A ++ +A + Q+ E+M +MKL
Sbjct: 158 KAPEA--------------------------------ISKAVASLPPEQMFELMKQMKLC 185
Query: 191 ATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
N +AR +LL P L AL QAQI++ + PQV
Sbjct: 186 IQNNPTEARNMLLQNPQLAYALLQAQIVMKIVDPQV 221
>gi|332372985|gb|AEE61634.1| unknown [Dendroctonus ponderosae]
Length = 409
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 115/218 (52%), Gaps = 50/218 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVG V+SF+LV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 14 RSVFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMR 73
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K ++ Q L P + E+ + +P
Sbjct: 74 NLNGYEIGGRSLRVDNACTEKSR----------------MEMQNLLNQPPV--ENPYGEP 115
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ A A ++ +A + Q+ E+M +
Sbjct: 116 VQAEKAPEA--------------------------------ISKAVASLPPEQMFELMKQ 143
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
MK N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 144 MKNTIQNNPTEARQMLLQNPQLAYALLQAQVVMKIIDP 181
>gi|345328415|ref|XP_001513073.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Ornithorhynchus anatinus]
Length = 1036
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 119/224 (53%), Gaps = 49/224 (21%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
+GNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL G
Sbjct: 456 LGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 515
Query: 71 YEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLH 130
E +GR LRVD A ++K + + G G P I+ ES + PI
Sbjct: 516 REFSGRALRVDNAASEKNKEELKSLGTGAP----II-------------ESPYGDPINPE 558
Query: 131 IAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLM 190
A + ++ +A + Q+ E+M +MKL
Sbjct: 559 DAPES--------------------------------ISRAVASLPPEQMFELMKQMKLC 586
Query: 191 ATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQ 234
+ ++AR +LL P L AL QAQ+++ + P++ + RQ
Sbjct: 587 VQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 630
>gi|426194040|gb|EKV43972.1| hypothetical protein AGABI2DRAFT_194877 [Agaricus bisporus var.
bisporus H97]
Length = 341
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 124/227 (54%), Gaps = 35/227 (15%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGN+PY+ E+QLI++ + VG V+ FRLV DRETGKP+GYGFCE+ D ETALSA R
Sbjct: 3 KVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSAVR 62
Query: 67 NLQGYEINGRQLRVDFAEND-----KGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
NL ++ GR LR+D A++D K R G PG A +P+++ GG G+
Sbjct: 63 NLNNVDVGGRPLRIDLADSDPFLEGKTTVRGELVDGGYPGPA---EPRQRGGGRGHDGDF 119
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
+ P G+ I A+ D ++ LAKM +QL
Sbjct: 120 LSQVPPGVPIPKGTKAL---------------------------DHISTTLAKMQPSQLM 152
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
E++++MK + +QARQLL+ P L ALFQ ++ + P +LQ
Sbjct: 153 EVLAQMKAFIITHPDQARQLLVKHPQLSYALFQGLLLNNIVDPAILQ 199
>gi|170054071|ref|XP_001862961.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
gi|167874431|gb|EDS37814.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
Length = 400
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 115/224 (51%), Gaps = 62/224 (27%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVGPV+S +LV DRE+GKPKGYGFCEYKD+ETALSA R
Sbjct: 15 RSVFVGNIPYEATEEKLKDIFSEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMR 74
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A +K +R + MAA+ L GP + P
Sbjct: 75 NLNGYEIGGRALRVDNACTEK----SRME------MAAL------LQGPQVDN------P 112
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
G P DP +T + + Q+
Sbjct: 113 YG----------------------------------DPCDPSDAPEIITKTVVSLPPEQM 138
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
E+M +MK N +AR +L+ P L AL QAQ+++ + P
Sbjct: 139 YELMKQMKTCFQNNPVEARTMLMQNPQLAYALLQAQVVMRIVDP 182
>gi|320168617|gb|EFW45516.1| hypothetical protein CAOG_03500 [Capsaspora owczarzaki ATCC 30864]
Length = 385
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 110/200 (55%), Gaps = 5/200 (2%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+CVFVGNI YD TE+++I++C +VGPV+SFRLV DR+TGKPKG+GFCEY D ETA SA R
Sbjct: 5 KCVFVGNISYDVTEQEVIDLCSQVGPVISFRLVFDRDTGKPKGFGFCEYTDAETAQSAIR 64
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL E+ GR++RVDFAE+D RG G + + + GP +H
Sbjct: 65 NLNDLELKGRRIRVDFAESDAVIKFGGNTDRGDRGGGDRAE-RGERPGPGMHVSKFQQDS 123
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ +A AA A V Q+ G S + LA M Q+ E + +
Sbjct: 124 APMDVASRAAPQHNPYQAAGPVYGQAPPAGGPPAAES----INTTLASMPPAQIFEFLKQ 179
Query: 187 MKLMATQNKEQARQLLLAKP 206
MK T + EQARQ L+ P
Sbjct: 180 MKQFITGSPEQARQTLMFNP 199
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 112/215 (52%), Gaps = 61/215 (28%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E +GR LRVD A ++K N+E+ K L GPA P
Sbjct: 76 NLNGREFSGRALRVDNAASEK----NKEE-------------LKSL-GPAA--------P 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQL 180
I I S P DP +T +A + Q+
Sbjct: 110 I-----------------------------IDSPYGDPIDPEDAPESITRAVASLPPEQM 140
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQA 215
E+M +MKL + ++AR +LL P L AL QA
Sbjct: 141 FELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQA 175
>gi|346979364|gb|EGY22816.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 306
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+ + R VFVGNIPY +EEQ+ +I G V++FRLV DRETG+PKG+GF EY D ++
Sbjct: 1 MSKTLSRVVFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDS 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A SA RNL YE GR+LRVDF+ D + QGR G +A P +G+
Sbjct: 61 AASAVRNLNDYETMGRKLRVDFSNEGGTDDNDFNQGRDGLSFSA----------PNTYGQ 110
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
+ P A T + G A + + D ++ L + +QL
Sbjct: 111 TAPAAP----QASTLPPLPPGKELPANI--------------TATDAISRTLNTLPPSQL 152
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPA 240
+I+++MK +A+ + +A +LL P L A+FQA +++G+ +P+ + +L G G PA
Sbjct: 153 LDILTQMKALASNDPARATELLQQAPQLSYAVFQALLLMGLVSPEAIHS-VLEPGSGVPA 211
>gi|313234527|emb|CBY10484.1| unnamed protein product [Oikopleura dioica]
Length = 333
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 116/218 (53%), Gaps = 48/218 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQ+ +I EVG V+SFRLV DRETGKPKGYGFCEYKD +TA+SA R
Sbjct: 25 RSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMSAMR 84
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL E++GR LRVD A D G ++ + P + I P + L GP+ +
Sbjct: 85 NLNTRELHGRNLRVDHATRDHGVEKEQ------PQASVIAPPVESLYGPSCN-------- 130
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
A +++ A+ + + Q+ +++ E
Sbjct: 131 -----PADAPELISQAINS-----------------------------LPPEQMYKLIKE 156
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
MK + +N +AR +LL P L L QAQ+++ + TP
Sbjct: 157 MKDVIMKNPVEARNMLLQNPQLAYGLLQAQVVMRIVTP 194
>gi|390605111|gb|EIN14502.1| hypothetical protein PUNSTDRAFT_110583 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 361
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 27/233 (11%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGN+PY+ E+QLI++ + VG V+ FRLV DRETGK KGYGFCE+ D ETA+SA R
Sbjct: 3 KVVFVGNVPYNMGEDQLIDVFKSVGEVIGFRLVFDRETGKAKGYGFCEFADHETAMSAVR 62
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL ++ GR LR+D A++D ++ + + G I G Q
Sbjct: 63 NLNNVDVGGRPLRIDLADSDP-----------------FLEGKTTVRGEIIDGGETRAQW 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQ----------SQLASPNDPLTLHLAKMS 176
TG+ ++ G+ + + D +T +LA +
Sbjct: 106 RERERERDDRDKSTGSFASSTGGLSRTDSNTSIGGLPPGIPVPPGITAEDMITENLAHIP 165
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQM 229
+QL E++++MK + +QARQLL++ P L ALF+A ++ + ++L +
Sbjct: 166 PDQLMEVLAQMKAFIITHPDQARQLLVSNPQLAYALFEALLLNNIVDQEILNV 218
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 118/230 (51%), Gaps = 43/230 (18%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
+S++ R VFVGNIPYD TE+ L EI E G V++FRLV DRETGKPKGYGFCEY D TA
Sbjct: 8 SSAKERSVFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATA 67
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
LSA RNL GYEINGR LRVDFA+ G D++ R + GG G S
Sbjct: 68 LSAMRNLNGYEINGRNLRVDFAD---GGDKSNSAERK----------RHDNGGNTRPGSS 114
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
GA G V + + I S + +A+M +L
Sbjct: 115 -------------GGNFRNGADGGRPTMV-TGEMAIHS--------IESAIARMGPVKLY 152
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPI 231
+++ ++K A Q + + +L+A P L A+ Q+ + LQ+PI
Sbjct: 153 DMLVQLKEHARQKPDVTKSILMANPALTHAIVQSF--------KTLQIPI 194
>gi|193671655|ref|XP_001946102.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Acyrthosiphon pisum]
Length = 388
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 69/82 (84%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 12 RSVFVGNIPYEATEEKLKDIFNEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMR 71
Query: 67 NLQGYEINGRQLRVDFAENDKG 88
NL GYEI GR LRVD A +K
Sbjct: 72 NLNGYEIGGRTLRVDNACTEKS 93
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 179 QLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
QL E+M +MK N +AR +LL P L AL QAQ+++ + P+V
Sbjct: 135 QLYELMKQMKECIQNNPAEARNMLLQNPQLGYALLQAQVIMKIVDPEV 182
>gi|384498968|gb|EIE89459.1| hypothetical protein RO3G_14170 [Rhizopus delemar RA 99-880]
Length = 344
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 72/95 (75%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS R VFVGNIP++ +EEQLIE+ +EVGPV SFRL+ DRETG+PKGYGFCE+ D ETA
Sbjct: 4 ASRGSRVVFVGNIPFELSEEQLIEVFKEVGPVASFRLLFDRETGRPKGYGFCEFYDAETA 63
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQG 96
SA RNL YEI GRQLRVD+A D R+ QG
Sbjct: 64 ASAVRNLNDYEIGGRQLRVDYAAMDDNHQRSSHQG 98
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 162 ASPNDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGM 221
AS D ++ LA M+ L +MS+MK M+ + + R+ L A P + ALFQA +M+ +
Sbjct: 171 ASSVDEISKVLASMNSQDLFTLMSQMKQMSFERPDFTREFLAANPQVAYALFQAMLMMNI 230
Query: 222 ATPQVL 227
P ++
Sbjct: 231 VDPNII 236
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 503 PQISPDV-------ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
P + PD+ + ALL +VL LT EQ+N LPP+ R Q+ QL+ L
Sbjct: 292 PPVQPDISQDDTEQQKALLMKVLQLTDEQINELPPQTRDQIRQLKAQL 339
>gi|345496803|ref|XP_003427819.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Nasonia vitripennis]
Length = 425
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDKG 88
NL GYEI GR LRVD A +K
Sbjct: 77 NLNGYEIGGRTLRVDNACTEKS 98
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
+A + Q+ E+M +MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 132 VASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDP 184
>gi|156553552|ref|XP_001601896.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Nasonia vitripennis]
Length = 434
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDKG 88
NL GYEI GR LRVD A +K
Sbjct: 77 NLNGYEIGGRTLRVDNACTEKS 98
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
+A + Q+ E+M +MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 132 VASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDP 184
>gi|307172466|gb|EFN63915.1| Cleavage stimulation factor 64 kDa subunit [Camponotus
floridanus]
Length = 438
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL GYEI GR LRVD A +K
Sbjct: 77 NLNGYEIGGRTLRVDNACTEK 97
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
+A + Q+ E+M +MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 132 VASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDP 184
>gi|66516308|ref|XP_623321.1| PREDICTED: cleavage stimulation factor subunit 2 [Apis mellifera]
Length = 441
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL GYEI GR LRVD A +K
Sbjct: 77 NLNGYEIGGRTLRVDNACTEK 97
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
+A + Q+ E+M +MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 132 VASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDPHT 186
>gi|380028061|ref|XP_003697730.1| PREDICTED: cleavage stimulation factor subunit 2-like [Apis
florea]
Length = 441
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL GYEI GR LRVD A +K
Sbjct: 77 NLNGYEIGGRTLRVDNACTEK 97
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
+A + Q+ E+M +MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 132 VASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDPHT 186
>gi|383860217|ref|XP_003705587.1| PREDICTED: cleavage stimulation factor subunit 2-like [Megachile
rotundata]
Length = 441
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL GYEI GR LRVD A +K
Sbjct: 77 NLNGYEIGGRTLRVDNACTEK 97
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
+A + Q+ E+M +MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 132 VASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDP 184
>gi|302926856|ref|XP_003054377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735318|gb|EEU48664.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 294
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 115/222 (51%), Gaps = 30/222 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ EI G V FRLV D ETG+PKG+GF +Y D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI GR+LRVDF+ K D +++QG G +P G G S QP
Sbjct: 68 NLNDYEIMGRKLRVDFSNEQKSTDEDKDQGGSG------YNPHGSNGA----GPSYSSQP 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
L + G + D ++ L + QL +I+S+
Sbjct: 118 STLPPLPAGKELPHG--------------------VTCTDAISRTLETLPPPQLLDILSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
MK +AT ++A +LL P L A+FQA +++G+ +P+ +Q
Sbjct: 158 MKTLATNEPQRAAELLQQAPQLAYAVFQALLLMGLVSPEAIQ 199
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 110/212 (51%), Gaps = 50/212 (23%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPYDATEE L EI EVG V+S +LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GY GR LRVD A +K +R + MAA+ +HG P
Sbjct: 76 NLNGYVFGGRPLRVDNACTEK----SRLE------MAAL-----------LHGPRA-ESP 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G H A + +T H++ M +L+E+M +
Sbjct: 114 YGEHCPPQHAPEV----------------------------ITKHVSSMPPERLHELMFQ 145
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIM 218
MK + N +AR +L+ P L AL Q Q++
Sbjct: 146 MKQLIQNNPFEARHMLMQNPQLAYALLQVQVL 177
>gi|322788027|gb|EFZ13868.1| hypothetical protein SINV_14012 [Solenopsis invicta]
Length = 291
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE L +I EVGPV+SF+LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 67 NLQGYEINGRQLRVDFAENDKG 88
NL GYEI GR LRVD A +K
Sbjct: 77 NLNGYEIGGRTLRVDNACTEKS 98
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
+A + Q+ E+M +MKL N +ARQ+LL P L AL QAQ+++ + P
Sbjct: 132 VASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMRIVDP 184
>gi|310800360|gb|EFQ35253.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 314
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 33/232 (14%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+ R VFVGNIPY +EEQ+ +I G V++FRLV DRETG+PKG+GF EY D ++
Sbjct: 1 MSKPPSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDS 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNRE----QGRGGPGMAAIVDPQKQLGGPA 116
A SA RNL YEI GR+LRVDF+ N+ G+D N + QGR G G + P
Sbjct: 61 AASAVRNLNDYEIMGRKLRVDFS-NEGGSDGNDDSHGHQGRDG-GNPSYASNGYNPAAPP 118
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMS 176
+ ++ P G + A D ++ L +
Sbjct: 119 VQSSTLPPLPAGKELPPNVTAT---------------------------DAISRTLNTLP 151
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
+QL +I+++MK +A+ + +A +LL P L A+FQA +++G+ +P+ +
Sbjct: 152 PSQLLDILTQMKALASSDPARATELLQQAPQLTYAVFQALLLMGLVSPEAIH 203
>gi|328866985|gb|EGG15368.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 436
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 116/230 (50%), Gaps = 34/230 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY A+E L+ + EVG VVSFRLV DR+ KP+GYGFCEY D+ETAL+A R
Sbjct: 12 RSVFVGNIPYAASESDLVNLFSEVGRVVSFRLVEDRDKKKPRGYGFCEYMDQETALNAIR 71
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRG--------GPGMAAIVDPQKQLGGPAIH 118
L E N RQLRV +A+NDK + G G G +DP+ GG
Sbjct: 72 LLNNREFNKRQLRVSYADNDKANELASAMGIGLVSPGMEGSGGGGGGIDPRTGGGG---- 127
Query: 119 GESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRN 178
I + M Q Q ++G Q L + N P
Sbjct: 128 -----------VIPMQPGGGMGNFDQPPQQQPQQQKDGFQQLLENSNSP----------- 165
Query: 179 QLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
QL E MS+MK + Q+ + ARQ+LL+ P L AL AQ++LGM Q Q
Sbjct: 166 QLFEAMSKMKQLVQQSPDNARQVLLSNPQLALALLHAQVVLGMVNQQTAQ 215
>gi|449016079|dbj|BAM79481.1| similar to cleavage stimulation factor subunit 2 [Cyanidioschyzon
merolae strain 10D]
Length = 300
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 122/235 (51%), Gaps = 36/235 (15%)
Query: 4 SQHRC-VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S+ C VF+GNIPY TE+ L+E ++VGPVVS R++ D+ETGKPKGYGFCEY+D ETA
Sbjct: 2 SRGSCTVFIGNIPYGVTEDMLLERLQQVGPVVSLRILYDKETGKPKGYGFCEYRDPETAE 61
Query: 63 SARRNL-QGYEINGRQLRVDFAENDK-----------GADRNREQGRGGPGMAAIVDPQK 110
SA RNL + E GR LR+ + + GA E GR GPG+
Sbjct: 62 SAVRNLNERIEFGGRMLRIAPSSQTRNQASAGGSTAPGAGAAPEGGRSGPGLGPGASAAS 121
Query: 111 QLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTL 170
A+ + QP G + AAQV +Q L P
Sbjct: 122 WGAYDALADATAPSQPTGPTVT------------AAQV--------VQPFLLPSGQP--- 158
Query: 171 HLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
L +S Q+ ++++E+K +A QN + R +L A PP+ A+ QAQ++LG+ + Q
Sbjct: 159 SLQGLSLQQIFDVLAELKTIAQQNPNEVRAMLAAHPPIAHAILQAQVLLGLLSAQ 213
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 502 IPQISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQ 540
+P E AL+QQ++SLTP Q+ +LPP+QRQQV+ +
Sbjct: 255 VPGQGAATEEALIQQLMSLTPAQIQALPPDQRQQVLAFR 293
>gi|393244579|gb|EJD52091.1| hypothetical protein AURDEDRAFT_142864 [Auricularia delicata
TFB-10046 SS5]
Length = 334
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 116/235 (49%), Gaps = 36/235 (15%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+++Q R VFVGN+PY+ EEQLI++ + VG VV FRLV DRETGKP+GYGFCE+ D ET
Sbjct: 1 MSTTQSRVVFVGNVPYNMGEEQLIDVFKNVGQVVGFRLVFDRETGKPRGYGFCEFADHET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAEND---KGADRNR----EQGRGGPGMAAIVDPQKQLG 113
A+SA RNL ++GR LR+D A++D +G R E+ RG
Sbjct: 61 AMSAVRNLNNVIVDGRPLRIDLADSDPFLEGKTTTRGELPEEARGW-------------- 106
Query: 114 GPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLA 173
G M L + GV S D +T LA
Sbjct: 107 ---------RGGGAGGGPGGPPGGAMDDFLASLPQGVNVPPG------TSSLDVITQTLA 151
Query: 174 KMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
M Q E++ +MK + EQAR LL+A P L ALFQA ++ + VL
Sbjct: 152 SMRPGQALEVLHQMKQFIIGSPEQARLLLVAHPQLAYALFQALLLHNIVDAAVLH 206
>gi|46105484|ref|XP_380546.1| hypothetical protein FG00370.1 [Gibberella zeae PH-1]
Length = 294
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 118/234 (50%), Gaps = 54/234 (23%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ EI G V FRLV D ETG+PKG+GF +Y D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +EI GR+LRVDF+ KG+D +++ P+ G S+H
Sbjct: 68 NLNDHEIMGRKLRVDFSNEQKGSDDDKD--------------------PSTSGYSMH--- 104
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQL------------ASPNDPLTLHLAK 174
A G +N N S L S D ++ L
Sbjct: 105 -------------------ASNGAATNYNAQPSTLPPLPSGKELPPGVSCTDSISRTLQT 145
Query: 175 MSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
+ QL +I+S+MK +AT + ++A +LL P L A+FQA +++G+ +P+ +Q
Sbjct: 146 LPPAQLLDILSQMKTLATNDPQRATELLQQAPQLGYAVFQALLLMGLVSPEAIQ 199
>gi|393215994|gb|EJD01485.1| hypothetical protein FOMMEDRAFT_142096 [Fomitiporia mediterranea
MF3/22]
Length = 355
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 117/241 (48%), Gaps = 56/241 (23%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGN+PY+ EE+LIE + VG VV FRLV DR+TGKPKGYGFCE+ D ETA+SA R
Sbjct: 3 KVVFVGNVPYNMQEEELIETFKTVGHVVGFRLVYDRDTGKPKGYGFCEFADHETAMSAVR 62
Query: 67 NLQGYEINGRQLRVDFAEND-------------------KGADRNREQGRGGPGMAAIVD 107
NL + GR LR+D A++D + R RE+ ++ D
Sbjct: 63 NLNNTDCGGRNLRIDLADSDPYLEGKTTVHGEIIDAGETRAQWRQREKRDHDDRRPSVQD 122
Query: 108 PQKQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP 167
P G+ + P G+ +A A+ D
Sbjct: 123 P----------GQFLKSLPQGVPLAPGTTAL---------------------------DA 145
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
++ LA + QL E++++MK + +QAR LL+A P L LFQA +M + P +L
Sbjct: 146 ISHRLATIDPAQLTEVLAQMKAFVINHPDQARMLLVAHPQLSYGLFQALLMNRIVDPAIL 205
Query: 228 Q 228
Q
Sbjct: 206 Q 206
>gi|395329428|gb|EJF61815.1| hypothetical protein DICSQDRAFT_154995 [Dichomitus squalens
LYAD-421 SS1]
Length = 374
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 135/272 (49%), Gaps = 40/272 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGN+PY+ E+QLI++ + VG VV RLV DR+TGKPKGYGFCE+ D ETA SA R
Sbjct: 3 KVVFVGNVPYNMAEDQLIDVFKSVGQVVGLRLVFDRDTGKPKGYGFCEFADHETAASAVR 62
Query: 67 NLQGYEINGRQLRVDFAEND---KGADRNR-EQGRGGPGMAAIVDP-QKQLGGPAIHGES 121
NL GYEI GR LR+D A++D +G R E GG A + +++ +G+
Sbjct: 63 NLNGYEIGGRPLRIDLADSDPFLEGKTTVRGEIIDGGETRAQWRERNERERHDRDRYGD- 121
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
HH +G + A + + SN S + + DP Q+
Sbjct: 122 -HHDRLGR--SNDPNAFLQHLPKGVPLPHGSNALDAISHVLATTDP----------GQIL 168
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQG------ 235
E++++MK + E AR LL+A P L ALFQA ++ + P +LQ + G
Sbjct: 169 EVLAQMKAFIITHPEHARALLVAHPQLGYALFQALLLHKIVDPAILQRMLAATGATIPPA 228
Query: 236 --------PGHPAQPLFQDGQQQVAQLPGLPP 259
P HPA P + P LPP
Sbjct: 229 TSAPPPTQPSHPAPPSYM-------STPALPP 253
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 495 VQYSEKQIPQISPDVESA---LLQQVLSLTPEQLNSLPPEQRQQVIQLQQ 541
V +S++ P PD++ A +L QVL+LT EQLN+LPP +R ++QL++
Sbjct: 319 VMHSQQPAPPRLPDLDQAQRDILMQVLNLTQEQLNTLPPSERDPILQLRR 368
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 122/236 (51%), Gaps = 48/236 (20%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG V+SFRLV DRE+GKPKGYGF EY+D+ETALS+ R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETALSSMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E++GR LRVD A +++ +RN E
Sbjct: 76 NLNGRELHGRPLRVDHATSER--NRNDE-------------------------------- 101
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
L + V+S+ S +P + ++ +A + Q+ E+M +
Sbjct: 102 -------------FNNLRSMAPPVESDYGDATSPQDAP-EAISKAVASLPPEQMFELMKQ 147
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQP 242
MK N +AR +LL P L AL QAQ+++ + P++ + RQ P P P
Sbjct: 148 MKQCIQNNPVEARNMLLQNPQLAYALLQAQVVMRIVDPEIAMKMLHRQTPVQPLIP 203
>gi|355681348|gb|AER96779.1| cleavage stimulation factor, 3 pre-RNA subunit 2, tau [Mustela
putorius furo]
Length = 174
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 112/217 (51%), Gaps = 55/217 (25%)
Query: 13 NIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYE 72
NIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL G E
Sbjct: 1 NIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 60
Query: 73 INGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIA 132
+GR LRVD A ++K + + G P I+D S + PI
Sbjct: 61 FSGRALRVDNAASEKNKEELKSLGPAAP----IID-------------SPYGDPI----- 98
Query: 133 ITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEIMSEMKL 189
P D +T +A + Q+ E+M +MKL
Sbjct: 99 ------------------------------DPEDAPESITRAVASLPPEQMFELMKQMKL 128
Query: 190 MATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
+ ++AR +LL P L AL QAQ+++ + P++
Sbjct: 129 CVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 165
>gi|408400674|gb|EKJ79751.1| hypothetical protein FPSE_00031 [Fusarium pseudograminearum CS3096]
Length = 295
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 118/234 (50%), Gaps = 54/234 (23%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ EI G V FRLV D ETG+PKG+GF +Y D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +EI GR+LRVDF+ KG+D +++ P+ G ++H
Sbjct: 68 NLNDHEIMGRKLRVDFSNEQKGSDDDKD--------------------PSTSGYNMH--- 104
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQL------------ASPNDPLTLHLAK 174
A G +N N S L S D ++ L
Sbjct: 105 -------------------ASNGAATNYNAQPSTLPPLPSGKELPPGVSCTDSISRTLQT 145
Query: 175 MSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
+ QL +I+S+MK +AT + ++A +LL P L A+FQA +++G+ +P+ +Q
Sbjct: 146 LPPAQLLDILSQMKTLATNDPQRATELLQQAPQLGYAVFQALLLMGLVSPEAIQ 199
>gi|429853390|gb|ELA28465.1| RNA-binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 314
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 26/228 (11%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+ R VFVGNIPY +EEQ+ +I G V++FRLV DRETG+PKG+GF EY D ++
Sbjct: 1 MSKPPSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDS 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A SA RNL YEI GR+LRVDF+ N+ G+D N + G + GG A H
Sbjct: 61 AASAVRNLNDYEIMGRKLRVDFS-NEGGSDDNNDAHVHG-----------RDGGNASHPS 108
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
+ ++ A +G L G + N + D ++ L + +QL
Sbjct: 109 NGYNP--------AAPPAPSGNLPPLPAGKELPPN------VTATDAISRTLNTLPPSQL 154
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
+I+++MK +A+ + +A +LL P L A+FQA +++G+ +P+ +
Sbjct: 155 LDILTQMKALASSDPARATELLQQAPQLAYAVFQALLLMGLVSPEAIH 202
>gi|392560296|gb|EIW53479.1| hypothetical protein TRAVEDRAFT_60908 [Trametes versicolor
FP-101664 SS1]
Length = 392
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 117/230 (50%), Gaps = 27/230 (11%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGN+PY+ E+ LI++ + VG VV RLV DRETGKPKGYGFCE+ D ETALSA R
Sbjct: 3 KVVFVGNVPYNMGEDSLIDVFKSVGQVVGLRLVFDRETGKPKGYGFCEFADHETALSAVR 62
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G EI GR LR+D A++D ++ + + G I G Q
Sbjct: 63 NLNGQEIGGRPLRIDLADSDP-----------------FLEGKTTVRGEIIDGGETRAQW 105
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQL-----ASPN----DPLTLHLAKMSR 177
H ++ G + N + L +PN D ++ LA
Sbjct: 106 RERH-GHERDRHDRHDRDDSRHGRGPDPNAFLASLPKGVPLTPNQNALDAISQVLASTEP 164
Query: 178 NQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
Q+ E++++MK + EQAR LL+A P L ALFQA ++ + P +L
Sbjct: 165 TQILEVLAQMKAFVITHPEQARALLVAHPQLGYALFQALLLHKIVDPAIL 214
>gi|296414143|ref|XP_002836762.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295631601|emb|CAZ80953.1| unnamed protein product [Tuber melanosporum]
Length = 287
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 124/241 (51%), Gaps = 44/241 (18%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S+ + VFVGNIPY TEEQ+ EI VG V+SFRLV DRETG+PKG+GF EY D+ETA
Sbjct: 6 SATGKIVFVGNIPYGLTEEQITEIFSSVGRVLSFRLVYDRETGRPKGFGFAEYSDQETAA 65
Query: 63 SARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESV 122
SA RNL YEI GR+LRVDF+ + G GM + +
Sbjct: 66 SAVRNLDNYEIMGRKLRVDFSHEGSATE--------GMGM-----------------DDI 100
Query: 123 HHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNE 182
Q G +G L A +G + + L +P D ++ L+ + QL +
Sbjct: 101 MTQASG-----------SGVLPALPLGAD-----LPAGLNAP-DAISRTLSALQPPQLLD 143
Query: 183 IMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQP 242
I+ +MK + T + +A +LL P L A+FQA +++ + VL I + P+QP
Sbjct: 144 ILGQMKALVTADPLKATELLRQAPQLSYAIFQALLLMNLVDTSVLTQVI--ENAAAPSQP 201
Query: 243 L 243
L
Sbjct: 202 L 202
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 511 SALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
+AL+QQVLSLTPEQ+ +LP +Q+ Q++ L+ L
Sbjct: 249 AALIQQVLSLTPEQIGALPADQQSQIMLLKHQL 281
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 120/244 (49%), Gaps = 42/244 (17%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A R VFVGNI Y+ EEQL ++ +VGPVV RLV DRETGKPKGYGFCEY D +TA
Sbjct: 18 ADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGFCEYNDPQTA 77
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
SA RNL GYE+NGRQLRVD A G +R+ ++
Sbjct: 78 ESAIRNLNGYELNGRQLRVDSA---AGGERSADE-------------------------- 108
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
A ++ Q + G + + + ++ +A + Q+
Sbjct: 109 ------------VQQLQAAFAAQQQELKAQESPYGAEVEPDKAPEAISRSVASLPPEQMF 156
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQ 241
E+M +MK N +A+ LL++ P L AL QAQ+++ + PQV + R+ P +Q
Sbjct: 157 ELMKQMKQCVHNNPNEAKNLLMSNPQLAYALLQAQVVMRIVDPQVAIAMLHRETPA-ISQ 215
Query: 242 PLFQ 245
P Q
Sbjct: 216 PFHQ 219
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 113/218 (51%), Gaps = 50/218 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPYDATEE L EI EVG V+S +LV DRETGKPKGYGFCEYKD+ETALSA R
Sbjct: 16 RSVFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GY GR LRVD A +K +R + MAA++ + ES P
Sbjct: 76 NLNGYVFGGRPLRVDNACTEK----SRME------MAALLHVNR--------AES----P 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G H + A + +T H++ + +L+E+M +
Sbjct: 114 YGEHCSPQHAPEV----------------------------ITKHVSSLPPERLHELMLQ 145
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
MK + N +AR +L+ P L AL Q Q++ P
Sbjct: 146 MKQLVQTNPFEARHMLVQNPQLAYALLQVQVLTKAIDP 183
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 460 FSVGALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVE-SALLQQVL 518
+ GA + PS G +VP + +P + D E +AL+ QVL
Sbjct: 299 MNAGAAHFGSNANQLPSGGTGRPMVPSAASLSAASSGLNLDPLPSDATDQEKAALIMQVL 358
Query: 519 SLTPEQLNSLPPEQRQQVIQLQQALLR 545
L+ EQ+N LPPEQR ++ L++ ++R
Sbjct: 359 QLSDEQINLLPPEQRNSILVLKEQIVR 385
>gi|380489160|emb|CCF36888.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 314
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 120/232 (51%), Gaps = 33/232 (14%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+ R VFVGNIPY +EEQ+ +I G V++FRLV DRETG+PKG+GF EY D ++
Sbjct: 1 MSKPPSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDS 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNRE----QGRGGPGMAAIVDPQKQLGGPA 116
A SA RNL YEI GR+LRVDF+ N+ G+D N + QGR G + P
Sbjct: 61 AASAVRNLNDYEIMGRKLRVDFS-NEGGSDGNDDNHGHQGRDA-GNTSYASNGYNPAAPP 118
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMS 176
++ P G + A D ++ L +
Sbjct: 119 TQPSTLPPLPAGKELPPNVTAT---------------------------DAISRTLNTLP 151
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
+QL +I+++MK +A+ + +A +LL P L A+FQA +++G+ +P+ +
Sbjct: 152 PSQLLDILTQMKALASSDPARATELLQQAPQLAYAVFQALLLMGLVSPEAIH 203
>gi|226466604|emb|CAX69437.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[Schistosoma japonicum]
Length = 414
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 110/225 (48%), Gaps = 48/225 (21%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A R +FVGNIPY+ATEE+LIE+ + GPV+ FRLV DRE+GKPKGYGFCEY + A
Sbjct: 11 AEKTARSIFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIA 70
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
SA RNLQ E NGR LR+ A G + E P + GP +
Sbjct: 71 ASALRNLQNIEFNGRPLRIGPA---AGEQNSAELALSNPSV-----------GPPL---- 112
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
P G +I AA + ++ +A + Q+
Sbjct: 113 --ESPYGDNIDPQAAP----------------------------EAISRAVASLPPEQMY 142
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL N +AR +LL P L AL QAQI++ + P+V
Sbjct: 143 ELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQIVMKIVDPKV 187
>gi|256085765|ref|XP_002579083.1| rna recognition motif containing protein [Schistosoma mansoni]
gi|360043212|emb|CCD78624.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 412
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 110/225 (48%), Gaps = 48/225 (21%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A R +FVGNIPY+ATEE+LIE+ + GPV+ FRLV DRE+GKPKGYGFCEY + A
Sbjct: 11 AEKTARSIFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIA 70
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
SA RNLQ E NGR LR+ A G + E P + GP +
Sbjct: 71 ASALRNLQNIEFNGRPLRIGPA---AGEQNSAELALSNPSV-----------GPPLES-- 114
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
P G +I AA + ++ +A + Q+
Sbjct: 115 ----PYGDNIDPQAAP----------------------------EAISRAVASLPPEQMY 142
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL N +AR +LL P L AL QAQI++ + P+V
Sbjct: 143 ELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQIVMKIVDPKV 187
>gi|313243391|emb|CBY42167.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 115/221 (52%), Gaps = 55/221 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQ+ +I EVG V+SFRLV DRETGKPKGYGFCEYKD +TA+SA R
Sbjct: 25 RSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMSAMR 84
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ---------GRGGPGMAAIVDPQKQLGGPAI 117
NL E++GR LRVD A D G ++ + Q G GGP + P + L GP+
Sbjct: 85 NLNTRELHGRNLRVDHATRDHGVEKEQPQASVSRSGTVGIGGP----VAPPVESLYGPSC 140
Query: 118 HGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSR 177
+ A +++ A+ + +
Sbjct: 141 N-------------PADAPELISQAINS-----------------------------LPP 158
Query: 178 NQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIM 218
Q+ +++ EMK + +N +AR +LL P L L QAQ++
Sbjct: 159 EQMYKLIKEMKDVIMKNPVEARNMLLQNPQLAYGLLQAQVV 199
>gi|156045437|ref|XP_001589274.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980]
gi|154694302|gb|EDN94040.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 321
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 25/227 (11%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+ + VFVGNIPY TEEQ+++I G V++FRLV DRETG+PKG+GF EY D ++
Sbjct: 1 MSKPPSKSVFVGNIPYGLTEEQIVDIFSSAGNVINFRLVYDRETGRPKGFGFAEYPDSDS 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A SA RNL YEI R+LRVDF+ ND G + N A P P ++
Sbjct: 61 AASAVRNLNDYEIMNRKLRVDFS-NDGGEEENS---------APTYQP------PPLNTN 104
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
+ T +L +GV+ Q L P D ++ L + +QL
Sbjct: 105 GLPVP---PPSLPIPQPSTTSSLPPLPIGVELPQG-----LNCP-DAISRTLNTLPPSQL 155
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+++S+MK +A+ + ++A +LL P L A+FQA +++G+ P+ L
Sbjct: 156 LDVLSQMKTLASTDPQKATELLHQAPQLSYAIFQALLLMGLVQPEAL 202
>gi|325189600|emb|CCA24085.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 358
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
++++ R VFVGNIPYD TEE L EI E G V++FRLV DR++GKPKGYGFCEY D TA
Sbjct: 10 SAAKERSVFVGNIPYDVTEEMLREIFSEAGAVMNFRLVTDRDSGKPKGYGFCEYADGATA 69
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
LSA RNL GYEINGR LRVDFA+
Sbjct: 70 LSAMRNLNGYEINGRNLRVDFAD 92
>gi|440792320|gb|ELR13547.1| cleavage stimulation factor 64kDa subunit, partial [Acanthamoeba
castellanii str. Neff]
Length = 84
Score = 132 bits (331), Expect = 6e-28, Method: Composition-based stats.
Identities = 58/74 (78%), Positives = 62/74 (83%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
RCVFVGNIPYDATEEQL EI VGPV FRLV DRETGKPKG+GFCEY+D ETA+SA
Sbjct: 11 QRCVFVGNIPYDATEEQLTEIFSSVGPVTCFRLVFDRETGKPKGFGFCEYRDTETAMSAM 70
Query: 66 RNLQGYEINGRQLR 79
RNL GY+INGR LR
Sbjct: 71 RNLNGYDINGRALR 84
>gi|392577175|gb|EIW70305.1| hypothetical protein TREMEDRAFT_71583 [Tremella mesenterica DSM
1558]
Length = 339
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 123/255 (48%), Gaps = 33/255 (12%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFV N+ +D +EEQL + EVGPV S + D +TG+PKGY F + DE TA+SA R
Sbjct: 5 RTVFVANLAFDVSEEQLANVFSEVGPVQSAEIKFDNQTGRPKGYAFVTFYDEATAISAIR 64
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL+ +NGR LR++ + +D + R R + G P P + P +H
Sbjct: 65 NLRDTNVNGRTLRIELSNDDPASSR-RRRDHGPPA------PVNRDLTPPVHAPYRDEPN 117
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
I L+ V+ G D ++ LA ++ Q+ E+M+
Sbjct: 118 IDLYNLPQGQEVLPGEKA--------------------TDVISRTLAAVTPGQMQEVMAG 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPL--F 244
+K + T + EQARQLL ++P L ALFQA +++ + P +LQ R P PA P F
Sbjct: 158 VKTLITSHPEQARQLLASQPQLAYALFQAMLLMKIVDPSILQ----RISPLPPAAPPTNF 213
Query: 245 QDGQQQVAQLPGLPP 259
Q P PP
Sbjct: 214 PPVSQAPTSFPPYPP 228
>gi|225711846|gb|ACO11769.1| Cleavage stimulation factor 64 kDa subunit [Lepeophtheirus
salmonis]
Length = 330
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 122/257 (47%), Gaps = 55/257 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVGPV SF+LV DRE GKPKGYGFCEYKD + ALSA R
Sbjct: 16 RSVFVGNIPYEATEEKLKDIFSEVGPVTSFKLVYDRENGKPKGYGFCEYKDADMALSAMR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL GYEI GR LRVD A ++NR + G + P +G+ VH
Sbjct: 76 NLNGYEIEGRTLRVDNA----CTEKNRLEMAKGEAEEIVESP---------YGDPVHPDR 122
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
IA N + S + + I+ E
Sbjct: 123 APETIA----------------------NLVSS---------------LPPEHMYSIIKE 145
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPLFQD 246
M+ N +QA+++L P L AL Q +++ P++ +L P P P FQ
Sbjct: 146 MRTCVLHNPDQAKRILQQNPQLAYALLQITVVMRAIDPEMATT-VLHPTP--PKPPQFQT 202
Query: 247 GQQQVAQLPGLPPLAQK 263
+ + P PP A++
Sbjct: 203 PSTRSSFFP--PPNAER 217
>gi|303287138|ref|XP_003062858.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455494|gb|EEH52797.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 165
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 111/216 (51%), Gaps = 51/216 (23%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
VGN+PYDATEE+L +I EVGPV +LV DR+TGK KGYGF E+ D TA SA+RNL G
Sbjct: 1 VGNVPYDATEERLADIFSEVGPV--HQLVTDRDTGKLKGYGFAEFMDLATAQSAKRNLNG 58
Query: 71 YEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLH 130
+ NGR LRV+F + + GA ++ RG P PA
Sbjct: 59 RDYNGRALRVEFQDGEDGAPPAKKPDRGAP--------------PA-------------- 90
Query: 131 IAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLM 190
AI A+ V G S D +T +A+MS QL + +++K
Sbjct: 91 TAIAASGVAAG---------------------SGLDAITARIAEMSPAQLFNVFNQLKAQ 129
Query: 191 ATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
N+ Q RQ+L+ P L ALFQAQ+ LGMA P V
Sbjct: 130 IQSNQSQTRQMLVQNPQLTFALFQAQLTLGMAKPPV 165
>gi|367018842|ref|XP_003658706.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
gi|347005973|gb|AEO53461.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
Length = 317
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 119/222 (53%), Gaps = 18/222 (8%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ EI G V++FRLV DRETG+PKG+GF E+ D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ-GRGGPGMAAIVDPQKQLGGPAIHGESVHHQ 125
NL YEI GR+LRVDF+ D NR++ G G G G + +
Sbjct: 68 NLNDYEIMGRKLRVDFSNETVSDDDNRDRDGAAGAG-----------------GINYSNN 110
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
P + + ++A+ + G + Q S D ++ L + QL +I+
Sbjct: 111 PGATNGSGSSASNPSATSGGSSSLPPLPQGKDLPPGVSCTDAISRTLNTLPPAQLLDILQ 170
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+MK +AT + +A +LL P L A+FQA +++G+ +P +
Sbjct: 171 QMKALATSDPARATELLTQAPQLSYAVFQALLIMGLVSPDAI 212
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 131 bits (329), Expect = 1e-27, Method: Composition-based stats.
Identities = 65/94 (69%), Positives = 74/94 (78%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 9 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGP 100
NL G E +GR LRVD A ++K + + G G P
Sbjct: 69 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAP 102
>gi|347830477|emb|CCD46174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 119/221 (53%), Gaps = 25/221 (11%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGNIPY TEEQ+I+I G VV+FRLV DRETG+PKG+GF EY D ++A SA R
Sbjct: 8 KSVFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI R+LRVDF+ ND G + N P Q P ++ +
Sbjct: 68 NLNDYEIMNRKLRVDFS-NDGGEEENSA-------------PTYQ--PPPLNTNGLPVP- 110
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
A T L +G+ Q L P D ++ L + +QL +++S+
Sbjct: 111 --PPSLPIPPASNTSPLPPLPIGIDLPQG-----LTCP-DAISRTLNTLPPSQLLDVLSQ 162
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
MK +A+ + ++A +LL P L A+FQA +++G+ P+ L
Sbjct: 163 MKTLASTDPQKATELLHQAPQLSYAVFQALLLMGLVQPEAL 203
>gi|154290312|ref|XP_001545753.1| hypothetical protein BC1G_15665 [Botryotinia fuckeliana B05.10]
Length = 322
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 119/221 (53%), Gaps = 25/221 (11%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGNIPY TEEQ+I+I G VV+FRLV DRETG+PKG+GF EY D ++A SA R
Sbjct: 8 KSVFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI R+LRVDF+ ND G + N P Q P ++ +
Sbjct: 68 NLNDYEIMNRKLRVDFS-NDGGEEENSA-------------PTYQ--PPPLNTNGLPVP- 110
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
A T L +G+ Q L P D ++ L + +QL +++S+
Sbjct: 111 --PPSLPIPPASNTSPLPPLPIGIDLPQG-----LTCP-DAISRTLNTLPPSQLLDVLSQ 162
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
MK +A+ + ++A +LL P L A+FQA +++G+ P+ L
Sbjct: 163 MKTLASTDPQKATELLHQAPQLSYAVFQALLLMGLVQPEAL 203
>gi|336372716|gb|EGO01055.1| hypothetical protein SERLA73DRAFT_50956 [Serpula lacrymans var.
lacrymans S7.3]
Length = 338
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 116/239 (48%), Gaps = 61/239 (25%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
VGN+PY+ EEQLI++ + VG V+ FRLV DR+TGKP+GYGFCE+ D +TA SA RNL
Sbjct: 1 VGNVPYNMGEEQLIDVFKSVGQVIGFRLVFDRDTGKPRGYGFCEFADHDTAASAVRNLNN 60
Query: 71 YEINGRQLRVDFAEND---------------------KGADRNREQGRGGPGMAAIVDPQ 109
++ GR LR+D A++D DR R+ R P DP
Sbjct: 61 VDVGGRPLRIDLADSDPFLEGKTTVRGELVDGGEGRPHWRDRERDDHRSHPKSQ---DPN 117
Query: 110 KQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLT 169
LG + P G+ + + A+ D +
Sbjct: 118 AFLG----------NLPPGVPVPMGTTAL---------------------------DTTS 140
Query: 170 LHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
LA M+ +QL E++++MK + EQAR LL+A P L ALFQA ++ + P +LQ
Sbjct: 141 QTLATMNPSQLMEVLAQMKAFVITHPEQARTLLIAHPQLAYALFQALLLNKIVDPAILQ 199
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 502 IPQISPD-VESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALL 544
+P ++ D + +L QVLSLTPEQ+N LPP +R+ + QL+ +
Sbjct: 290 VPDLNIDPAQRQMLMQVLSLTPEQINGLPPSERETIQQLRNQFM 333
>gi|242018247|ref|XP_002429590.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
gi|212514557|gb|EEB16852.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
Length = 408
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 67/87 (77%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M R VFVGNIP+D TEE+L EI EVGPV+SF+LV DRE GKPKGYGFCEYKD ET
Sbjct: 8 MLERSMRSVFVGNIPFDLTEEKLKEIFSEVGPVLSFKLVYDRENGKPKGYGFCEYKDIET 67
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDK 87
A SA RNL G+EI GR L+VD A N+K
Sbjct: 68 ANSAMRNLNGFEIGGRVLKVDNAANEK 94
>gi|339251302|ref|XP_003373134.1| cleavage stimulation factor subunit, tau variant [Trichinella
spiralis]
gi|316969004|gb|EFV53174.1| cleavage stimulation factor subunit, tau variant [Trichinella
spiralis]
Length = 351
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%), Gaps = 4/91 (4%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
++RC VGNI YDATEE+L EI +VGPVV FRLV DRETGKPKGYGFCEY D+ETALSA
Sbjct: 21 ENRCFAVGNISYDATEEELKEIFSQVGPVVGFRLVFDRETGKPKGYGFCEYLDQETALSA 80
Query: 65 RRNLQGYEINGRQLRVDFAENDKGADRNREQ 95
+RNL YE +GR LRVD A DR+RE+
Sbjct: 81 QRNLCNYEFHGRPLRVDAA----VGDRSREE 107
>gi|346324388|gb|EGX93985.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 284
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 117/236 (49%), Gaps = 39/236 (16%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY +EEQ+ +I + G V FRLV D ETG+PKG+GF EY D ++A SA R
Sbjct: 8 RVVFVGNIPYGLSEEQITDIFSDAGKVERFRLVYDSETGRPKGFGFAEYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI GR+LRVDF+ K +D + G Q P G+ + P
Sbjct: 68 NLNDYEIMGRKLRVDFSHEQKASDDDYTPNAGTTSNGTSHTAQPSSLPPLPPGKDI---P 124
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
GL D ++ L + QL +I+++
Sbjct: 125 PGLTC---------------------------------TDAISRTLNTLPPAQLLDILTQ 151
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQP 242
MK +AT + ++A +LL P L A+FQA +++G+ +P+ +Q I PG P+ P
Sbjct: 152 MKTLATTDPQRAAELLQQAPQLAYAVFQALLLMGLVSPEAIQSVI---EPGAPSAP 204
>gi|116181910|ref|XP_001220804.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
gi|88185880|gb|EAQ93348.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
Length = 315
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ EI G V++FRLV DRETG+PKG+GF E+ D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI GR+LRVDF+ N+ +D + G G + PA S + P
Sbjct: 68 NLNDYEIMGRKLRVDFS-NETVSDEDNRDRDGAAGTSG-----GNYSNPATANGSGANVP 121
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQ--NGIQSQLASPNDPLTLHLAKMSRNQLNEIM 184
+I AA G + Q G+ S D ++ L + QL +I+
Sbjct: 122 ---SASIQAAGPGGGGGSSLPPLPQGKDLPPGV-----SCTDAISRTLNTLPPAQLLDIL 173
Query: 185 SEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPG 237
+MK +AT + +A +LL P L A+FQA +++G+ +P + +L G G
Sbjct: 174 QQMKTLATNDPARATELLSQAPQLSYAIFQALLIMGLVSPDAIN-SVLEPGAG 225
>gi|31201653|ref|XP_309774.1| AGAP010918-PA [Anopheles gambiae str. PEST]
gi|21293399|gb|EAA05544.1| AGAP010918-PA [Anopheles gambiae str. PEST]
Length = 393
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 67/81 (82%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEE+L +I EVGPV+S +LV DRE+GKPKGYGFCEYKD+ETALSA R
Sbjct: 14 RSVFVGNIPYEATEEKLKDIFCEVGPVLSLKLVFDRESGKPKGYGFCEYKDQETALSAMR 73
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL GYE GR LRVD A +K
Sbjct: 74 NLNGYEFGGRALRVDNACTEK 94
>gi|322693277|gb|EFY85143.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 309
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 112/224 (50%), Gaps = 37/224 (16%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY +EEQ+ EI G V FRLV D ETG+PKG+GF +Y D ++A SA R
Sbjct: 8 RVVFVGNIPYGLSEEQITEIFSRAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +E+ GR+LRVDF+ K D + Q P P G AI S+ P
Sbjct: 68 NLNDFEVMGRKLRVDFSNEQKSGDDDNSQSMSNPTNGT---PTNAYGAQAI---SLPPLP 121
Query: 127 IGLHI--AITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIM 184
G I +T D ++ L + +QL +I+
Sbjct: 122 AGKEIPPGLTC-----------------------------TDAISRTLNTLPPSQLLDIL 152
Query: 185 SEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
+MK +AT ++A +LL P L A+FQA +++G+ +P+ +Q
Sbjct: 153 GQMKTLATSEPQRATELLQQAPQLSYAVFQALLLMGLVSPEAIQ 196
>gi|328852118|gb|EGG01266.1| hypothetical protein MELLADRAFT_73006 [Melampsora larici-populina
98AG31]
Length = 357
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 118/227 (51%), Gaps = 17/227 (7%)
Query: 7 RCVFVGNIPY---DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
+ VFVGN+PY D ++QL ++ VG V +FR+ ++ETGKP+G+GFCEY D +TA S
Sbjct: 6 KIVFVGNLPYSHSDELQKQLEDVFSTVGLVSNFRIAFEKETGKPRGFGFCEYFDTQTAES 65
Query: 64 ARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAI---HGE 120
A RNLQG EI GR LR+DFA D G RE G P P K G A+ + +
Sbjct: 66 AIRNLQGIEIGGRALRLDFA--DVGNHDTREAGGRPP-------PPKGRRGAAMAQANRD 116
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
G G +G + Q + Q A+ D ++ LA + QL
Sbjct: 117 EFGGGGGGGGRGPMGNGNGQGPIGGLPPDLPRGQPLVAGQAAT--DQISQTLAAIPPGQL 174
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
EI +MK + +QARQLL A P L ALFQA +M+G+ VL
Sbjct: 175 AEITGQMKQLVATAPDQARQLLTANPQLTYALFQAMLMMGIVDASVL 221
>gi|339255520|ref|XP_003370865.1| cleavage stimulation factor protein [Trichinella spiralis]
gi|316963145|gb|EFV48928.1| cleavage stimulation factor protein [Trichinella spiralis]
Length = 256
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%), Gaps = 4/91 (4%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
++RC VGNI YDATEE+L EI +VGPVV FRLV DRETGKPKGYGFCEY D+ETALSA
Sbjct: 21 ENRCFAVGNISYDATEEELKEIFSQVGPVVGFRLVFDRETGKPKGYGFCEYLDQETALSA 80
Query: 65 RRNLQGYEINGRQLRVDFAENDKGADRNREQ 95
+RNL YE +GR LRVD A DR+RE+
Sbjct: 81 QRNLCNYEFHGRPLRVDAA----VGDRSREE 107
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 69/87 (79%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A R VFVGNIPY+A+++QL +I + GPV+SFRLV DRETGKPKGYGFCEYKD ETA
Sbjct: 21 AEKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYGFCEYKDSETA 80
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKG 88
SA RNL G EI+GRQLRVD A + KG
Sbjct: 81 QSAMRNLNGTEIHGRQLRVDSAASQKG 107
>gi|440635199|gb|ELR05118.1| hypothetical protein GMDG_07160 [Geomyces destructans 20631-21]
Length = 318
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGNIPY TEEQ+I+I G VV+FRLV DRETG+PKG+GF EY D ++A SA R
Sbjct: 8 KSVFVGNIPYGLTEEQIIDIFSSAGKVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI R+LRVDF+ ND D H P
Sbjct: 68 NLNDYEIMNRKLRVDFS-NDGAEDETSAP------------------------TGYQHPP 102
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ L+ M GA+ + + L P D ++ L + +QL +++S+
Sbjct: 103 LPLNGVPVPPPGMAPPNGASTLPPLPQGIDLPPGLTCP-DSISRTLNTLPPSQLLDVLSQ 161
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMAT 223
MK + T ++ +A +LL P L A+FQA +++G+ +
Sbjct: 162 MKSLVTTDQGKAIELLRQAPQLSYAIFQALLLMGLVS 198
>gi|345562877|gb|EGX45885.1| hypothetical protein AOL_s00112g74 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 120/230 (52%), Gaps = 28/230 (12%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R F+GNIPY +EEQ+++I +VG V+SFRLV DR+TGKPKG+GF EY D E A SA R
Sbjct: 9 RIAFIGNIPYGLSEEQIVDIFSKVGQVLSFRLVYDRDTGKPKGFGFAEYADAEIAASAVR 68
Query: 67 NLQGYEINGRQLRVDFA-ENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQ 125
NL +EI GR+LRVDF+ E DK A E G
Sbjct: 69 NLDNFEIMGRKLRVDFSHEGDKDAQDGYEPPAAG-------------------------N 103
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
P G +IA +AA + GA+ + + L +P D ++ L + QL +++S
Sbjct: 104 PRG-NIAGGSAANAGSSSGASLLPQLPPGAEVPPNLEAP-DMISKTLETLPPAQLLDVIS 161
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQG 235
+MK +A + + +LL P L A+FQA +++ + P +L I G
Sbjct: 162 QMKQLALSDPAKCMELLRKAPQLCYAIFQALLLMNLVDPSILSQVIESSG 211
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 31/35 (88%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALL 544
++AL+QQV+SLTPEQ++ LPPEQ+ ++QL+Q ++
Sbjct: 242 KAALVQQVMSLTPEQISMLPPEQQAAILQLRQQIM 276
>gi|358254188|dbj|GAA54213.1| cleavage stimulation factor subunit 2 [Clonorchis sinensis]
Length = 437
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 107/225 (47%), Gaps = 48/225 (21%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A R +FVGNIPY+ATEE+LIE+ + GPV+ FRLV DRE+GKPKGYGFCEY + A
Sbjct: 16 AEKTARSIFVGNIPYEATEEKLIELFGKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIA 75
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
SA RNLQ E NGR L R GP + L PA+ G
Sbjct: 76 ASALRNLQNIEFNGRPL------------------RIGPAAGEQNSAELALSNPAV-GPP 116
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
+ P G AA + ++ +A + Q+
Sbjct: 117 LE-SPYGDKCDPQAAP----------------------------EAISRAVASLPPEQMY 147
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
E+M +MKL N +AR +LL P L AL QAQI++ + P+V
Sbjct: 148 ELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQIVMKIVDPKV 192
>gi|170095009|ref|XP_001878725.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646029|gb|EDR10275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 121/238 (50%), Gaps = 26/238 (10%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA+S + VFVGN+PY+ E+QLI++ + VG V+ FRL DR+TGKPKGYGFCE+ D ET
Sbjct: 1 MAAS--KVVFVGNVPYNMAEDQLIDVFKSVGQVIGFRLSYDRDTGKPKGYGFCEFADHET 58
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A+SA RNL G ++ GR LR+D AE+ DP + G + GE
Sbjct: 59 AMSAVRNLNGVDVGGRPLRIDLAES---------------------DPHLE-GKTTVRGE 96
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPN-DPLTLHLAKMSRNQ 179
P + + + G+Q S + D ++ LA M +Q
Sbjct: 97 IYPDAPPSSGWRGGGGGSSGRGFDP-EAFLANLPPGVQIPKGSSSLDHISQTLATMQPSQ 155
Query: 180 LNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPG 237
L E++++MK + +QA+ LL+ P ALFQA ++ + +LQ + G G
Sbjct: 156 LMEVLAQMKAFVITHPDQAKILLVKHPQFAYALFQALLLNKIVDQAILQRMLEATGAG 213
>gi|358391586|gb|EHK40990.1| hypothetical protein TRIATDRAFT_249243 [Trichoderma atroviride IMI
206040]
Length = 300
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 113/223 (50%), Gaps = 37/223 (16%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY +EEQ+ +I G V FRLV D ETG+PKG+GF +Y D ++A SA R
Sbjct: 8 RVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRN-REQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQ 125
NL YEI GR+LRVDF+ K D + + G G A+ + Q P G+ +
Sbjct: 68 NLNEYEIMGRKLRVDFSNEQKSTDDDGQNTGASNSGAASGYNTQSTPLPPLPAGKEI--- 124
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
P GL D ++ L + QL +I+S
Sbjct: 125 PPGLTC---------------------------------TDAISRTLNTLPPPQLLDILS 151
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
+MK +AT ++A +LL P L A+FQ+ +++G+ +P+ +Q
Sbjct: 152 QMKTLATSEPQRATELLQQAPQLAYAVFQSLLLMGLVSPEAIQ 194
>gi|367052583|ref|XP_003656670.1| hypothetical protein THITE_2121633 [Thielavia terrestris NRRL 8126]
gi|347003935|gb|AEO70334.1| hypothetical protein THITE_2121633 [Thielavia terrestris NRRL 8126]
Length = 332
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 22/225 (9%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ E+ G V++FRLV DRETG+PKG+GF E+ D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITELFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ-GRGGPGMAAIVDPQKQLGGPA-IHGESVHH 124
NL +E+ GR+LRVDF+ D NR++ G G G ++ P+ +G S
Sbjct: 68 NLNDHEVMGRKLRVDFSNETVSDDDNRDRDGATGAGASST------YANPSTTNGNSAAA 121
Query: 125 QPIGLHIAITAAAVMTGALGAAQV--GVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNE 182
P + + + + + GV D ++ L + QL +
Sbjct: 122 GPGAGGFSSSTSTTLPPLPQGKDLPPGVTC------------TDAISRTLNTLPPAQLLD 169
Query: 183 IMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
I+ +MK +AT + +A +LL P L A+FQA +++G+ TP+ +
Sbjct: 170 ILQQMKTLATSDPARATELLAQAPQLSYAVFQALLIMGLVTPEAI 214
>gi|358378081|gb|EHK15764.1| hypothetical protein TRIVIDRAFT_38275 [Trichoderma virens Gv29-8]
Length = 300
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 112/223 (50%), Gaps = 37/223 (16%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY +EEQ+ +I G V FRLV D ETG+PKG+GF +Y D ++A SA R
Sbjct: 8 RVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFA-ENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQ 125
NL YEI GR+LRVDF+ E G D + G G A+ Q P G+ +
Sbjct: 68 NLNEYEIMGRKLRVDFSNEQKSGDDDGQNPGASNGGAASSYSSQSVPLPPLPAGKEI--- 124
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
P GL D ++ L + QL +I+S
Sbjct: 125 PPGLTC---------------------------------TDAISRTLNTLPPPQLLDILS 151
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
+MK +AT ++A +LL P L A+FQ+ +++G+ +P+ +Q
Sbjct: 152 QMKTLATSEPQRATELLQQAPQLAYAVFQSLLLMGLVSPESIQ 194
>gi|400599253|gb|EJP66957.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 316
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 131/260 (50%), Gaps = 20/260 (7%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY +EEQ+ +I + G V FRLV D ETG+PKG+GF EY D ++A SA R
Sbjct: 8 RVVFVGNIPYGLSEEQITDIFSDAGKVERFRLVYDAETGRPKGFGFAEYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +EI GR+LRVDF+ K AD + + + P P E H
Sbjct: 68 NLNDHEIMGRKLRVDFSHEQKVADDDYTP-------VSCIKPY-----PNDLFELKHEAK 115
Query: 127 IGLHIAI-TAAAVMTGALGAAQVGVQSNQNGIQSQL---ASPNDPLTLHLAKMSRNQLNE 182
+I A + GA AQ + + D ++ L + QL +
Sbjct: 116 TLTNICFQNATTTLNGASHMAQPPSSLPPLPPGKDIPPGLTCTDAISRTLNTLPPAQLLD 175
Query: 183 IMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGH-PAQ 241
I+++MK +A+ + ++A +LL P L A+FQA +++G+ +P+ +Q + PG P+
Sbjct: 176 ILTQMKALASSDPQRAAELLQQAPQLSYAVFQALLLMGLVSPEAIQSVV---EPGTAPSA 232
Query: 242 PLFQDGQQQVAQLPGLPPLA 261
P Q +PG P +A
Sbjct: 233 PPVQQPPVGYGAVPGYPQVA 252
>gi|398396524|ref|XP_003851720.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
gi|339471600|gb|EGP86696.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
Length = 321
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 29/231 (12%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPYD +EEQ+++I G VV FRLV D+ET +PKG+GF EY D ++A SA R
Sbjct: 9 RVVFIGNIPYDVSEEQIMDIFGRTGQVVGFRLVYDKETQQPKGFGFLEYTDADSAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +E+NGR LRVD++ +++G N++Q + E + P
Sbjct: 69 NLNDFELNGRTLRVDYSNDNRGTTNNKDQNQ----------------------EHSNRAP 106
Query: 127 IGLHIAIT-AAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
H + +A AL G + G+ + D ++ + + QL +++S
Sbjct: 107 PPAHFNMNQSAPPNAAALPTLPPGTEL-PPGVTAI-----DAISKTIQAIPTPQLLDLIS 160
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGP 236
++K + T N QA L P L A+FQA ++LG+ P ++ I P
Sbjct: 161 QVKGICTSNPAQATALFQQAPQLGYAIFQAMLLLGLVDPSIVHQLIESTAP 211
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 509 VESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
++ A+ Q+++LTP+Q+N+LPPE R QV+QL+ L
Sbjct: 285 MDPAIKAQIMALTPDQINNLPPEFRAQVLQLKATL 319
>gi|351697169|gb|EHB00088.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 180
Score = 126 bits (316), Expect = 4e-26, Method: Composition-based stats.
Identities = 62/96 (64%), Positives = 75/96 (78%), Gaps = 4/96 (4%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIP++A+EEQL +I EVGPVVSFR V DRETGKPKGYGFCEY+D+ETALSA ++L
Sbjct: 18 VFVGNIPHEASEEQLRDIFSEVGPVVSFRWVYDRETGKPKGYGFCEYQDQETALSAMQHL 77
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAA 104
G+E +GR LRVD A ++K N+E G GM A
Sbjct: 78 NGHEFSGRALRVDSAASEK----NKELKCLGTGMTA 109
>gi|409047225|gb|EKM56704.1| hypothetical protein PHACADRAFT_93372, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 302
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 109/226 (48%), Gaps = 52/226 (23%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
VGN+PY+ EEQLI+ + VG VV FRLV DR+TGKPKGYGFCE+ D ETALSA RNL G
Sbjct: 1 VGNVPYNMAEEQLIDAFKSVGQVVGFRLVYDRDTGKPKGYGFCEFADHETALSAVRNLNG 60
Query: 71 YEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLH 130
EI GR LR+D A++D + G + GE V
Sbjct: 61 QEIGGRPLRIDLADSDPFLE----------------------GKTTVRGEIVD------- 91
Query: 131 IAITAAAVMTGALGAAQVGVQSNQNGIQSQL---------ASPNDPLTLHLAKMSRNQLN 181
+ Q + N QL + D ++ LA +Q+
Sbjct: 92 --------------GGETRAQWHPNAFLHQLPQGVPLPPGTNAMDHISNVLATTQPSQIL 137
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
E++++MK + EQAR LL+A P L ALFQA ++ + VL
Sbjct: 138 EVLAQMKAFIITHPEQARALLMAHPQLGYALFQALLLNKIVDTAVL 183
>gi|328772931|gb|EGF82968.1| hypothetical protein BATDEDRAFT_85683 [Batrachochytrium
dendrobatidis JAM81]
Length = 263
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 102/200 (51%), Gaps = 38/200 (19%)
Query: 20 EEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLR 79
E Q+I+I REVG VVSFRLV DRET KPKGYGFC ++D ETA SA RNL YEI+GR LR
Sbjct: 7 ETQIIDIFREVGTVVSFRLVFDRETSKPKGYGFCTFQDHETAASAVRNLNNYEISGRPLR 66
Query: 80 VDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIAITAAAVM 139
V+FA+ DK A GP G+ ++ +++ A
Sbjct: 67 VNFADADKEA---------GP-----------------DGQPINWSEEDARRGVSSPAPG 100
Query: 140 TGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQAR 199
GA GV S + +Q+ + +QL E++ +KLM N EQ R
Sbjct: 101 VGATPRVLQGVNSTEAVLQA------------VGSFQASQLTELLGHLKLMIQTNPEQCR 148
Query: 200 QLLLAKPPLLKALFQAQIML 219
LL+ P L A+FQA I L
Sbjct: 149 TLLIRNPQLAYAVFQALISL 168
>gi|406867619|gb|EKD20657.1| RNA recognition motif containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 125/234 (53%), Gaps = 32/234 (13%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+ + + VFVGNIPY TEEQ+I I G V++FRLV DRETG+PKG+GF E+ D ++
Sbjct: 1 MSKAPSKSVFVGNIPYGLTEEQIIRIFSTAGKVLNFRLVYDRETGRPKGFGFVEFPDSDS 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A SA RNL +EI R+LRVDF+ + D N +A ++ Q
Sbjct: 61 AASAVRNLNDHEIMNRKLRVDFSNDGDNGDDN----------SAPLNYQ----------- 99
Query: 121 SVHHQPIGLHIAI-----TAAAVMTGALGAAQVGVQSNQNGIQ--SQLASPNDPLTLHLA 173
HQP + IA+ A + + G A + G++ L P D ++ L
Sbjct: 100 ---HQPPPMPIAMPSNGYAAPSPLEGPPRGAPSSIPPLPLGVELPQGLTCP-DAISRTLN 155
Query: 174 KMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+ QL +++S+MK +AT + +A +LL P L A+FQA +++G+ + + L
Sbjct: 156 TLPPAQLLDVLSQMKTLATTDAARATELLHQAPQLSYAIFQALLLMGLVSTEAL 209
>gi|358054768|dbj|GAA99146.1| hypothetical protein E5Q_05837 [Mixia osmundae IAM 14324]
Length = 344
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 111/226 (49%), Gaps = 38/226 (16%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+ + +F+GN+PYDATE+QL E GPVV RLV D +TGK KG+GF E+ D A
Sbjct: 19 AGKTNVIFIGNLPYDATEQQLAEHFSSAGPVVGARLVFDHDTGKAKGFGFVEFYDANVAT 78
Query: 63 SARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESV 122
SA RNL G + GR LRVD AE +G+ R + +G P
Sbjct: 79 SAVRNLNGEQFLGRALRVDHAEPKEGSAPRTNPIRQANNAPPAMARAMAVGAPP------ 132
Query: 123 HHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNE 182
G+++A A+AV D ++ LA + N+L +
Sbjct: 133 -----GVNLAPGASAV---------------------------DSISETLATLPPNELLD 160
Query: 183 IMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
IMS+MK + T + +QA+ LL P L ALFQA +M+ + P VLQ
Sbjct: 161 IMSQMKSLVTTSPDQAKALLAGNPQLTYALFQAMLMMNIVDPIVLQ 206
>gi|302683536|ref|XP_003031449.1| hypothetical protein SCHCODRAFT_257523 [Schizophyllum commune H4-8]
gi|300105141|gb|EFI96546.1| hypothetical protein SCHCODRAFT_257523 [Schizophyllum commune H4-8]
Length = 324
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 115/227 (50%), Gaps = 35/227 (15%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S+ + VFVGN+PY+ +E++LI++ + VG V FRLV DRETGKP+GYGFCE+ D +TAL
Sbjct: 2 STTSKVVFVGNVPYNMSEDELIDVFKNVGEVAGFRLVFDRETGKPRGYGFCEFTDHDTAL 61
Query: 63 SARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESV 122
SA RNL E+ GR LR+D A++D + +G+ I P++ G P +
Sbjct: 62 SAVRNLNNIEVKGRNLRIDLADSDP-----QLEGKTTVRGELIDGPERPRGPPDPN---- 112
Query: 123 HHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLAS-PNDPLTLHLAKMSRNQLN 181
A + T G + + I LAS P L LA+M LN
Sbjct: 113 -------------AFLKTLPPGVPVPPGSTCLDTISHILASIPPGQLMEILAQMKSFVLN 159
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
N + AR LL A P L ALFQA ++ + P VLQ
Sbjct: 160 ------------NTDGARALLTAHPQLAYALFQALLLNNIVDPVVLQ 194
>gi|331218218|ref|XP_003321787.1| hypothetical protein PGTG_03324 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300777|gb|EFP77368.1| hypothetical protein PGTG_03324 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 362
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 16/224 (7%)
Query: 7 RCVFVGNIPY---DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
+ VFVGN+PY D ++QL ++ VGP+ +FR+ ++E+GKP+G+GFCEY D +TA S
Sbjct: 6 KIVFVGNLPYSHSDELQKQLEQVFGTVGPISNFRIAFEKESGKPRGFGFCEYFDTQTAES 65
Query: 64 ARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVH 123
A RNLQG EI GR LR+DFA D G RE G G ++ G G ++
Sbjct: 66 AIRNLQGIEIGGRALRLDFA--DVGNHDTREAG----GRPPPPKGRRSGGAGQAGGGNLP 119
Query: 124 HQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEI 183
+P G A + + TG + Q Q A+ D ++ LA + QL EI
Sbjct: 120 TEPNG-SSARNSGPISTG----LPPDLPRGQPLAAGQTAT--DQISQTLAAIPPAQLAEI 172
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+MK + +QARQLL A P L ALFQA +M+G+ +L
Sbjct: 173 TGQMKQLVASAPDQARQLLNANPQLTYALFQAMLMMGVVDASIL 216
>gi|19114796|ref|NP_593884.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|74698319|sp|Q9P6P7.1|YKCG_SCHPO RecName: Full=Uncharacterized RNA-binding protein C644.16
gi|7708595|emb|CAB90143.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 422
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGNIPY+ EEQ+I+I ++ GPV SF+LVID E+G+PKGYGFCEY D TA SA RNL
Sbjct: 7 VYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAVRNL 66
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIG 128
Y+ R+LRVDF D+ ++ G G PQ +G + P
Sbjct: 67 NNYDAGTRRLRVDFPTADQIRRLDKLLGPSRYGYY----PQSYANQSYTYGNNFGSYP-P 121
Query: 129 LHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMK 188
+ G G + LA ND + LA+++ N+++ ++S +K
Sbjct: 122 TQPSTQPLPQSYGYPSYPPAGYRGGSARPSGVLA--NDEVYRVLAQLAPNEIDYMLSAIK 179
Query: 189 LMATQNKEQARQLLLAKPPLLKALFQAQIM 218
+ + EQA QL P L A+FQA +M
Sbjct: 180 ALCLEAPEQAAQLFETNPQLSYAVFQAMLM 209
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 31/35 (88%)
Query: 509 VESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
++AL+ Q+++LT +Q+N LPP+Q+++++Q++QAL
Sbjct: 379 TKAALIAQLMALTDDQINVLPPDQKERILQIRQAL 413
>gi|388583458|gb|EIM23760.1| hypothetical protein WALSEDRAFT_53459 [Wallemia sebi CBS 633.66]
Length = 306
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 108/223 (48%), Gaps = 35/223 (15%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGN+PYD EE+++ I EVGPV FR+ D+ TGKPKGYGF EY D +TA SA R
Sbjct: 12 KIVFVGNLPYDINEEEVVRIFSEVGPVKDFRMNFDKHTGKPKGYGFVEYYDGDTAASAVR 71
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL + GR LRVD A +D + +E+ + M++ G A
Sbjct: 72 NLHDNPVGGRPLRVDLAPDDPKHVKQKEREKHHNNMSS--------GNYAPLPPPPTAAR 123
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+G+ +A +A D ++ LA + NQL +I+S+
Sbjct: 124 MGIDMAPGQSAT---------------------------DSISQTLASLPPNQLLDILSQ 156
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQM 229
M+ RQLL P L ALFQA +M+ + VLQ+
Sbjct: 157 MRASVHTESNSVRQLLNQNPQLSYALFQAMLMMNLCDNTVLQV 199
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQ 541
+ A++ QVLS TP+Q+++LPP+QR ++ L+Q
Sbjct: 270 QQAMVMQVLSFTPQQIDALPPDQRMSIVALRQ 301
>gi|255089613|ref|XP_002506728.1| predicted protein [Micromonas sp. RCC299]
gi|226522001|gb|ACO67986.1| predicted protein [Micromonas sp. RCC299]
Length = 317
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGN+PYDATEE+L ++ EVGPV FRLV DRETGK KGYGFCEY D TA SA+RNL
Sbjct: 8 VFVGNVPYDATEERLRDMFSEVGPVHDFRLVTDRETGKLKGYGFCEYMDLATAESAKRNL 67
Query: 69 QGYEINGRQLRVDFAENDKGADR 91
G E NGR LRVDFA+ ADR
Sbjct: 68 NGREYNGRNLRVDFAD---AADR 87
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 508 DVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQ 541
D + ALLQQV+S+TPEQ+ LPP+QRQQV L+Q
Sbjct: 277 DQQQALLQQVMSMTPEQMAMLPPDQRQQVEMLRQ 310
>gi|164427135|ref|XP_964488.2| hypothetical protein NCU03311 [Neurospora crassa OR74A]
gi|157071622|gb|EAA35252.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 322
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 119/226 (52%), Gaps = 28/226 (12%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ EI G V++FRLV DRETG+PKG+GF E+ D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAE---NDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVH 123
NL +EI GR+LRVDF+ +D+ R+R+ G Q G S +
Sbjct: 68 NLNDHEIMGRKLRVDFSNETVSDEDGGRDRDGGSN----------QNASG-------SYN 110
Query: 124 HQP--IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLN 181
QP G + + ALG G + + D ++ L + QL
Sbjct: 111 AQPPNGGGYNTAPPVSAAPPALGPLPQGKDLPPD------VTCTDAISRTLNTLPPAQLL 164
Query: 182 EIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+I+ +MK +AT + +A +LL P L A+FQA +++G+ +P +
Sbjct: 165 DILQQMKTLATNDPARATELLNQAPQLSYAIFQALLIMGLVSPDAI 210
>gi|336261134|ref|XP_003345358.1| hypothetical protein SMAC_04589 [Sordaria macrospora k-hell]
gi|380090609|emb|CCC11604.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 321
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 118/221 (53%), Gaps = 23/221 (10%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ EI G V++FRLV DRETG+PKG+GF E+ D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +EI GR+LRVDF+ N+ D++ Q P + G G +
Sbjct: 68 NLNDHEIMGRKLRVDFS-NETFTDQDSAQ------------PNQNTSG----GYNAQAPN 110
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G + A A+ ALG G + S D ++ L + QL +I+ +
Sbjct: 111 GGGYNAAPPASAAPPALGPLPQGKDLPPD------VSCTDAISRTLNTLPPAQLLDILQQ 164
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
MK +AT + +A +LL P L A+FQA +++G+ +P +
Sbjct: 165 MKTLATNDPARATELLNQAPQLSYAIFQALLIMGLVSPDAI 205
>gi|213408745|ref|XP_002175143.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
gi|212003190|gb|EEB08850.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
Length = 308
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 124/246 (50%), Gaps = 18/246 (7%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+ + VFVGNIPYDATE+Q+ +I ++G V SF+LV+D ET +PKGYGFCE+ D ET
Sbjct: 1 MSMTAGNVVFVGNIPYDATEKQMADIFHQIGTVRSFKLVLDPETNQPKGYGFCEFHDPET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAEND-KG-ADRNREQGRGGPG--MAAIVDPQKQLGGPA 116
A SA RNL + R+LRV+F ND +G +D + + R P M P A
Sbjct: 61 AASAVRNLNNFPFGARKLRVEFPSNDPRGRSDSSNDGIRHAPSSLMHNNPTPTPPPPSSA 120
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALG---AAQVGVQSNQNGIQSQLASP--------- 164
+ ++ Q + + +AA + G +A + S + P
Sbjct: 121 VSLSALQSQSAYRPMNMPSAAAIVAPNGLPSSASLPANPAAASAPSIIPGPAVVSAPATI 180
Query: 165 --NDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
P+ L+ +L +I+ ++K + ++A+ LL A P L A+FQ ++L M
Sbjct: 181 SKTSPIAKTLSAFPAKELLDIVEQLKTVVHVAPDEAKNLLKATPALSYAVFQILLLLNMV 240
Query: 223 TPQVLQ 228
+VLQ
Sbjct: 241 DARVLQ 246
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 511 SALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
+AL+ Q++SLTP Q+N LPPEQR Q++ L+Q L
Sbjct: 273 NALVSQLMSLTPAQINMLPPEQRNQILLLKQRL 305
>gi|71017595|ref|XP_759028.1| hypothetical protein UM02881.1 [Ustilago maydis 521]
gi|46098750|gb|EAK83983.1| hypothetical protein UM02881.1 [Ustilago maydis 521]
Length = 403
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
Query: 1 MASSQH--RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDE 58
MA +Q R VFVGNIPYD +EEQL ++ REVG VV FRLV DRETGK KGYGFCE++D
Sbjct: 1 MAGAQRGSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRETGKFKGYGFCEFEDP 60
Query: 59 ETALSARRNLQGYEINGRQLRVDFAEND 86
ETA SA RNL E+ GR LR+ FA+ D
Sbjct: 61 ETAASAVRNLNEVEVGGRPLRISFADID 88
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 165 NDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
D +T LA + NQL +IMS+MK + + +QAR LL P L ALFQA +M+ + P
Sbjct: 213 TDAITQTLATLPPNQLLDIMSQMKSLVATSPDQARALLTGHPQLAYALFQAMLMMNVVDP 272
Query: 225 QVLQ 228
+LQ
Sbjct: 273 DILQ 276
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 507 PDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQ 540
P+ + ALL QVL LTP+Q+N+LPP+Q+ ++QL+
Sbjct: 364 PEEQKALLMQVLQLTPDQINALPPDQKASILQLK 397
>gi|388853962|emb|CCF52460.1| related to Cleavage stimulation factor [Ustilago hordei]
Length = 402
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPYD +EEQL ++ REVG VV FRLV DRETGK KGYGFCE++D ETA SA R
Sbjct: 9 RVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRETGKFKGYGFCEFEDPETAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAEND 86
NL E+ GR LR+ FA+ D
Sbjct: 69 NLNEVEVGGRALRISFADID 88
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 165 NDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
D +T LA + NQL +IMS+MK + + +QAR LL P L ALFQA +M+ + P
Sbjct: 208 TDAITQTLATLPPNQLLDIMSQMKSLVATSPDQARALLSGHPQLAYALFQAMLMMNVVDP 267
Query: 225 QVLQ 228
++LQ
Sbjct: 268 EILQ 271
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 507 PDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQ 540
P+ + ALL QVL LTP+Q+N+LPP+Q+ ++QL+
Sbjct: 363 PEEQKALLMQVLQLTPDQINALPPDQKASILQLK 396
>gi|389624649|ref|XP_003709978.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|351649507|gb|EHA57366.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|440467437|gb|ELQ36660.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae Y34]
gi|440480452|gb|ELQ61114.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
P131]
Length = 305
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 115/222 (51%), Gaps = 34/222 (15%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY +EEQ+ +I G V++FRLV DRETGKPKG+GF EY D ++A SA R
Sbjct: 8 RVVFVGNIPYGLSEEQITDIFSRAGKVLNFRLVYDRETGKPKGFGFAEYPDNDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQG-RGGPGMAAIVDPQKQLGGPAIHGESVHHQ 125
NL EI GR+LRVDF+ N+K + + + G GG + Q+Q P S+
Sbjct: 68 NLNDTEIMGRKLRVDFS-NEKPSTNDPDDGPPGGANGSGAPSYQQQQEVP-----SLPPL 121
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
P G I GV S D ++ L + QL +I+
Sbjct: 122 PPGKDIP---------------AGV------------SATDAISRTLRTLPPAQLLDILQ 154
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+MK M+ + +A +LL P L A+FQA +++ + +P +
Sbjct: 155 QMKTMSGADPARATELLTQAPQLSYAIFQALLLMDLVSPDAI 196
>gi|343429703|emb|CBQ73275.1| related to Cleavage stimulation factor [Sporisorium reilianum
SRZ2]
Length = 391
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 62/80 (77%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPYD +EEQL ++ REVG VV FRLV DR+TGK KGYGFCE++D ETA SA R
Sbjct: 9 RVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRDTGKFKGYGFCEFEDPETAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAEND 86
NL E+ GR LR+ FA+ D
Sbjct: 69 NLNEVEVGGRPLRISFADID 88
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 166 DPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
D +T LA + NQL +IMS+MK + + +QAR LL P L ALFQA +M+ + P
Sbjct: 203 DAITQTLATLPPNQLLDIMSQMKSLVATSPDQARALLSGHPQLAYALFQAMLMMNVVDPD 262
Query: 226 VLQ 228
+LQ
Sbjct: 263 ILQ 265
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 507 PDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQ 540
P+ + ALL QVL LTPEQ+N+LPP+Q+ ++QL+
Sbjct: 352 PEEQKALLMQVLQLTPEQINALPPDQKASIMQLK 385
>gi|281207156|gb|EFA81339.1| hypothetical protein PPL_05322 [Polysphondylium pallidum PN500]
Length = 1665
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
VGNIPYDATE++LI+I EVG VVSFR+V DR+T KPKGYGFCEY D+ETA SA RNL
Sbjct: 7 LVGNIPYDATEKELIDIFSEVGRVVSFRMVEDRDTKKPKGYGFCEYLDQETAQSAIRNLN 66
Query: 70 GYEINGRQLRVDFAENDKG 88
E+N R LRV +A+N+K
Sbjct: 67 NRELNKRNLRVSYADNEKA 85
>gi|449299689|gb|EMC95702.1| hypothetical protein BAUCODRAFT_34465 [Baudoinia compniacensis UAMH
10762]
Length = 337
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 117/222 (52%), Gaps = 24/222 (10%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY +EEQ+ EI VG VVSFRLV D+ET KPKG+GF EY D + A SA R
Sbjct: 9 RVVFIGNIPYGVSEEQICEIFGRVGNVVSFRLVYDKETNKPKGFGFLEYTDVDAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +E+ GR LRVD++ ND G R+++ + P
Sbjct: 69 NLNEFEVMGRTLRVDYS-NDNGGGRSKD---------------------QTQQQQDTRAP 106
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
H A A GA A + + + + +++P D ++ LA + QL +I+S+
Sbjct: 107 PPAHFNAQAPAQSNGAAPAPLPPLPPGVD-LPAGMSAP-DAISKTLATIPPAQLLDILSQ 164
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
MK +AT+N A LL P L A+FQA ++LG+ LQ
Sbjct: 165 MKTLATENPMSAAALLAQAPQLSYAIFQALLLLGLVDTNKLQ 206
>gi|342874383|gb|EGU76397.1| hypothetical protein FOXB_13075 [Fusarium oxysporum Fo5176]
Length = 293
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 30/222 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ +I G V FRLV D ETG+PKG+GF +Y D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITDIFSSAGKVERFRLVYDPETGRPKGFGFADYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +EI GR+LRVDF+ + K +D +++ PGM+ ++ P
Sbjct: 68 NLNDFEIMGRKLRVDFSNDQKSSDDDKD-----PGMS-------------------NYNP 103
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ A+ + + L G + +G+ S D ++ L + QL +I+S+
Sbjct: 104 HVSNGAVPSYSAQPSTLPPLPAG-KELPHGV-----SCADAISRTLETLPPPQLLDILSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
MK +A+ ++A +LL P L A+FQA +++G+ +P+ +Q
Sbjct: 158 MKTLASSEPQRATELLQQAPQLAYAVFQALLLMGLVSPEAIQ 199
>gi|19113461|ref|NP_596669.1| mRNA cleavage and polyadenylation specificity factor complex
subunit Ctf1 [Schizosaccharomyces pombe 972h-]
gi|15213955|sp|O43040.1|CTF1_SCHPO RecName: Full=Cleavage and termination factor 1; AltName:
Full=Transcription termination factor ctf1
gi|2950477|emb|CAA17791.1| mRNA cleavage and polyadenylation specificity factor complex
subunit Ctf1 [Schizosaccharomyces pombe]
Length = 363
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 133/285 (46%), Gaps = 56/285 (19%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+ + VFVGNIPYD +E+Q+ EI +VGPV +F+LV+D ETG KGYGFCE+ D ET
Sbjct: 1 MSMTAGNVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAEND----------KGADRNREQ---------GRGGPG 101
A R L E+ R++RV+F ND + DR EQ R P
Sbjct: 61 TAMAVRKLNNSELGPRKIRVEFPSNDPRRNQSYEYTERTDRYMEQQNAHESSYNSRFIPP 120
Query: 102 MAAIVD--PQKQLGG---PAIHGESVHHQPIGLHIAITAAAV--------MTGALGAA-- 146
+ P Q GG PAI+ S+ L+ I + +V MT +A
Sbjct: 121 VLHSTSSLPASQGGGMPSPAIYSSSM---ATNLNKNINSTSVPAYNFHNSMTSDFDSASQ 177
Query: 147 -----------QVGVQSNQNGIQSQLASPNDPLTLHLA--------KMSRNQLNEIMSEM 187
Q S G + S ++P ++ LA S +L ++S++
Sbjct: 178 PHTDAYNARTFQYNKSSQNKGDYTSGTSISNPTSIPLAPSVVQVLSTFSAQELLNMLSKL 237
Query: 188 KLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPIL 232
+ + E+AR+LL+A P L A FQA +++ + VLQ ++
Sbjct: 238 QTVVHIAPEEARRLLIANPALPYAAFQAMLLMNLVDANVLQQVVV 282
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 512 ALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLR 545
AL+QQ+L+LTPEQ+N+LPP QR Q++ +++ R
Sbjct: 329 ALIQQLLALTPEQINALPPAQRDQILSIRRQHFR 362
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 111/221 (50%), Gaps = 24/221 (10%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY +EE ++EI G V++FRLV D+ETG+PKG+GF EY D ++A SA R
Sbjct: 9 RVVFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSDTDSAQSAIR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YE+NGR LRVDF+ ND A +N Q P P
Sbjct: 69 NLNEYELNGRTLRVDFS-NDNRATKNEGQNNNNNNQGNRAPP-----------------P 110
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
A A +GAL GVQ + D ++ +A+ S L + +S+
Sbjct: 111 AHFDAAPPGARPDSGALPQLPPGVQLPPG------VTAFDAISKTIAQTSTPDLLDFISQ 164
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+K + N QA LL + P L A+FQA ++L + ++
Sbjct: 165 LKGICASNPAQATALLASSPQLGYAVFQAMLLLNLVDTNIV 205
>gi|340374250|ref|XP_003385651.1| PREDICTED: cleavage stimulation factor subunit 2-like [Amphimedon
queenslandica]
Length = 315
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 105/213 (49%), Gaps = 49/213 (23%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FV NI ++ TE+Q+ + EVGPV+S +L+ D +GKP+G+GFCEY+D ETA SA R
Sbjct: 23 RSIFVANIAFETTEDQMRAVLSEVGPVLSLKLIQDPVSGKPRGFGFCEYEDAETARSACR 82
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G E+NGR LR+D A N G E R P ++P L GPAI ES
Sbjct: 83 NLAGRELNGRPLRIDSAMNAPG-----ESFRSAPIPQGPIEP--PLHGPAIPPES----- 130
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
A +T A +A + + E+M +
Sbjct: 131 --------APESITKA-----------------------------VASLPPEHMYELMKQ 153
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIML 219
+K N ++ RQLLL P L AL QAQ+++
Sbjct: 154 VKWCIQNNPQETRQLLLHNPQLAYALLQAQVVM 186
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
++ALL QVLSLT EQ+ LPP+QR +++L++ L
Sbjct: 276 KAALLMQVLSLTDEQIQMLPPDQRNNILRLKEQL 309
>gi|307110149|gb|EFN58385.1| hypothetical protein CHLNCDRAFT_56825 [Chlorella variabilis]
Length = 1521
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 30/221 (13%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
+GN+ YD T++ +I+ +VGPV R+V +R+TGKP+G+GF E+ D TA SA RNL G
Sbjct: 1076 LGNLSYDLTDQDVIDHFSQVGPVKHVRIVTERDTGKPRGFGFIEFFDIPTAESAIRNLSG 1135
Query: 71 YEINGRQLRVDFAENDKG---ADRNREQGRGGPG-----MAAIVDPQKQLGGPAIHGESV 122
+ GR +R+ +AE G + R+ + RG P ++ + + G+
Sbjct: 1136 KDFKGRTIRIVYAEGGPGEFRSGRDFDDQRGPPSRFDDRGGPGGPGRRPMRDRVVGGDLA 1195
Query: 123 HHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNE 182
+H G+ A+ A + GA P D +T LA+ SR +L +
Sbjct: 1196 YHASHGV-AALLDAPLAPGA---------------------PADAITHLLARRSRAELYD 1233
Query: 183 IMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMAT 223
+++MK + +N QARQ+L+ P L KALFQ Q++LGM +
Sbjct: 1234 YLAQMKGLLQRNPTQARQILVDNPQLAKALFQMQVILGMVS 1274
>gi|66362022|ref|XP_627975.1| cleavage stimulation factor subunit 2 that has a CSF1 like RRM
domain [Cryptosporidium parvum Iowa II]
gi|46227640|gb|EAK88575.1| cleavage stimulation factor subunit 2 that has a CSF1 like RRM
domain [Cryptosporidium parvum Iowa II]
Length = 304
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 10/215 (4%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
VGN+P+DATE++L E+ GPV+S R+V D++TG +G+ FCEY+D ET + A ++L
Sbjct: 5 LVGNVPFDATEDELREVMNSAGPVLSMRIVHDKDTGLSRGFSFCEYRDIETCIMAIKSLN 64
Query: 70 GYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGL 129
GYE+ GR +RVD+A D + N G A + + G G H PI L
Sbjct: 65 GYELRGRSIRVDWASQDMRSRYNHLVVNNTSGTAPVTATTQGGIGMGQQGTEGLHHPISL 124
Query: 130 HIAITAAAVMTGALGAAQV-GVQSNQNGIQSQLASPNDPLTLHLAK-MSRNQLNEIMSEM 187
+ + +N + I S++ + L + M+ +QL ++ M
Sbjct: 125 TAPSHVQQIQEDGTSMPSIPNNNANFDNISSEI--------IQLVQGMTVSQLYYLIGHM 176
Query: 188 KLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
+ + QN E AR +LL P AL +Q +LGM
Sbjct: 177 QKLVVQNPETARSILLDNPQFCYALLHSQFILGMV 211
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNI Y+ EEQL ++ +VGPVV RLV DR+TGKPKGYGFCEY D +TA SA R
Sbjct: 26 RSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIR 85
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ 95
NL G+E+NGR LRVD A G DR+ ++
Sbjct: 86 NLNGFELNGRPLRVDSA---AGGDRSADE 111
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
++ +A + Q+ E+M +MK N +A+ LL+ P L AL QAQ+++ + PQV
Sbjct: 149 ISRSVASLPPEQMFELMKQMKQCVHNNPNEAKNLLMNNPQLAYALLQAQVVMRIVDPQVA 208
Query: 228 QMPILRQGPG 237
+ R+ P
Sbjct: 209 VAMLHRETPA 218
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNI Y+ EEQL ++ +VGPVV RLV DR+TGKPKGYGFCEY D +TA SA R
Sbjct: 26 RSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIR 85
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ 95
NL G+E+NGR LRVD A G DR+ ++
Sbjct: 86 NLNGFELNGRPLRVDSA---AGGDRSADE 111
>gi|322708972|gb|EFZ00549.1| polyadenylation factor subunit CstF64 [Metarhizium anisopliae ARSEF
23]
Length = 339
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 113/255 (44%), Gaps = 68/255 (26%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKD--------- 57
R VFVGNIPY +EEQ+ EI G V FRLV D ETG+PKG+GF +Y D
Sbjct: 8 RVVFVGNIPYGLSEEQITEIFSRAGKVERFRLVYDSETGRPKGFGFADYPDTGSSSNPYA 67
Query: 58 --EETAL--------------------SARRNLQGYEINGRQLRVDFAENDKGADRNREQ 95
E TA+ SA RNL +E+ GR+LRVDF+ K D + Q
Sbjct: 68 ATEHTAIASSTLPRNHADLISATDSASSAVRNLNDFEVMGRKLRVDFSNEQKSGDDDNSQ 127
Query: 96 GRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHI--AITAAAVMTGALGAAQVGVQSN 153
P P G AI S+ P G I +T
Sbjct: 128 STSNPTNGT---PTNAYGAQAI---SLPPLPAGKEIPPGLTC------------------ 163
Query: 154 QNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALF 213
D ++ L + +QL +I+ +MK +AT ++A +LL P L A+F
Sbjct: 164 -----------TDAISRTLNTLPPSQLLDILGQMKTLATSEPQRATELLQQAPQLSYAVF 212
Query: 214 QAQIMLGMATPQVLQ 228
QA +++G+ +P+ +Q
Sbjct: 213 QALLLMGLVSPEAIQ 227
>gi|378731681|gb|EHY58140.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 293
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 114/228 (50%), Gaps = 37/228 (16%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA R VFVGNIP++ +EE +++I G VV FRL+ + ETGK KG+GF +++D ++
Sbjct: 1 MAPGSSRSVFVGNIPFNLSEENIVKILSYAGTVVKFRLMTNPETGKSKGFGFADFQDADS 60
Query: 61 ALSARRNLQGYEINGRQLRVDFA-ENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHG 119
A +A RNL +EI+GR++RVD+ N+K A PG G ++ G
Sbjct: 61 AANAVRNLNDFEIDGRKIRVDWPHNNEKDAPPTNYDQTNAPG------------GDSMQG 108
Query: 120 ESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQ 179
GAL GV N D ++ L+ + Q
Sbjct: 109 SG------------------AGALPPMPAGVDLPPN------LRCTDAISQTLSTVPPPQ 144
Query: 180 LNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
L +++++MK +A + +A LL A P L A+FQA I++ + P+VL
Sbjct: 145 LLDVLTQMKALAISDPAKATSLLKAAPQLSFAIFQALILMNLVDPKVL 192
>gi|389746164|gb|EIM87344.1| hypothetical protein STEHIDRAFT_78229, partial [Stereum hirsutum
FP-91666 SS1]
Length = 244
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 62/80 (77%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGN+PY+ EEQLI++ + VG V+ FRLV DR+TGKPKGYGFCE+ D ETA SA R
Sbjct: 3 KVVFVGNVPYNMGEEQLIDVFKSVGQVIGFRLVYDRDTGKPKGYGFCEFGDHETAQSAVR 62
Query: 67 NLQGYEINGRQLRVDFAEND 86
NL ++ GR LR+D A++D
Sbjct: 63 NLNNVDVGGRPLRIDLADSD 82
>gi|294896462|ref|XP_002775569.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239881792|gb|EER07385.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 361
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGN+PYD EEQL I VGPVVSFRL+ D+ TG+PKGYGFCEY D+ETA +A RNL
Sbjct: 11 VFVGNVPYDVDEEQLKSIFSTVGPVVSFRLMHDKVTGRPKGYGFCEYADQETAYAAMRNL 70
Query: 69 QGYEINGRQLRVDFAE----NDKGADRNREQGRGGPGMAAIVDPQKQL 112
E GR LRVD+A+ N +G R+ ++ G + + K+L
Sbjct: 71 NNVECGGRPLRVDWADHELRNTEGVQRSIQRSGADVGRSNVKVNNKKL 118
>gi|24416589|gb|AAN05428.1| tCstF-64 [Bos taurus]
Length = 605
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 101/204 (49%), Gaps = 61/204 (29%)
Query: 29 EVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKG 88
EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL G E +GR LRVD A ++K
Sbjct: 1 EVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK- 59
Query: 89 ADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQV 148
N+E+ K LG AA +
Sbjct: 60 ---NKEE-------------LKSLG--------------------PAAPI---------- 73
Query: 149 GVQSNQNGIQSQLASPNDP------LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLL 202
I S P DP +T +A + Q+ E+M +MKL + ++AR +L
Sbjct: 74 --------IDSPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNML 125
Query: 203 LAKPPLLKALFQAQIMLGMATPQV 226
L P L AL QAQ+++ + P++
Sbjct: 126 LQNPQLAYALLQAQVVMRIMDPEI 149
>gi|213403776|ref|XP_002172660.1| cleavage stimulation factor 64 kDa subunit [Schizosaccharomyces
japonicus yFS275]
gi|212000707|gb|EEB06367.1| cleavage stimulation factor 64 kDa subunit [Schizosaccharomyces
japonicus yFS275]
Length = 391
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGNIPY+ EEQ+++I ++ GPV SF L++D ETG+PKGYGFCEY D TA+SA RNL
Sbjct: 7 VYVGNIPYEMAEEQVVDIFKQSGPVKSFHLMMDNETGQPKGYGFCEYHDRSTAVSAVRNL 66
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIG 128
Y++ R+LRVDF D+ R + G A + P G
Sbjct: 67 HNYDVGTRRLRVDFPTPDQ---IRRLEKMGAAQQAPPLAP-------------------G 104
Query: 129 LHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMK 188
A ++ + G G+ + + + L + ++ L+ S +L+ ++ K
Sbjct: 105 AVNAPVSSTPLPGQPGSLLPPLPAGKYPPPKMLVP--EAISRVLSSYSAAELDSVLMSTK 162
Query: 189 LMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+ +N +Q QL P A+FQA +M P +L
Sbjct: 163 TLCQENPDQMCQLFDLCPQYSYAIFQAMLMKNYTEPSLL 201
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 30/36 (83%)
Query: 510 ESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLR 545
++AL+ Q+++LT EQ+N L P Q+ Q++QL++AL++
Sbjct: 355 QAALIAQLMALTDEQINMLQPHQKTQILQLREALMK 390
>gi|443898802|dbj|GAC76136.1| mRNA cleavage and polyadenylation factor I complex, subunit RNA15
[Pseudozyma antarctica T-34]
Length = 401
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 62/84 (73%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+S H VGNIPYD +EEQL ++ REVG VV FRLV DR+TGK KGYGFCE++D ETA
Sbjct: 6 ASNHFTNAVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRDTGKFKGYGFCEFEDPETAA 65
Query: 63 SARRNLQGYEINGRQLRVDFAEND 86
SA RNL E+ GR LR+ FA+ D
Sbjct: 66 SAVRNLNEVEVGGRPLRISFADID 89
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 166 DPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
D +T LA + NQL +IMS+MK + T + +QAR LL P L ALFQA +M+ + P
Sbjct: 204 DAITQTLATLPPNQLLDIMSQMKSLVTTSPDQARALLTGHPQLAYALFQAMLMMNVVDPD 263
Query: 226 VLQ 228
+LQ
Sbjct: 264 ILQ 266
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 27/34 (79%)
Query: 507 PDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQ 540
P+ + ALL QVL LTP+Q+N+LP +Q+ ++QL+
Sbjct: 362 PEEQKALLMQVLQLTPDQINALPADQKASIMQLK 395
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 3/89 (3%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNI Y+ EEQL ++ +VG VV RLV DR+TGKPKGYGFCEY D +TA SA R
Sbjct: 26 RSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIR 85
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ 95
NL G+E+NGR LRVD A G DR+ ++
Sbjct: 86 NLNGFELNGRPLRVDSA---AGGDRSADE 111
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
++ +A + Q+ E+M +MK N +A+ LL+ P L AL QAQ+++ + PQV
Sbjct: 149 ISRSVASLPPEQMFELMKQMKQCVHNNPNEAKNLLVNNPQLAYALLQAQVVMRIIDPQVA 208
Query: 228 QMPILRQGPG 237
+ R+ P
Sbjct: 209 IAMLHRETPA 218
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 3/89 (3%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNI Y+ EEQL ++ +VG VV RLV DR+TGKPKGYGFCEY D +TA SA R
Sbjct: 26 RSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAIR 85
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ 95
NL G+E+NGR LRVD A G DR+ ++
Sbjct: 86 NLNGFELNGRPLRVDSA---AGGDRSADE 111
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
++ +A + Q+ E+M +MK N +A+ LL+ P L AL QAQ+++ + PQV
Sbjct: 149 ISRSVASLPPEQMFELMKQMKQCVHNNPNEAKNLLMNNPQLAYALLQAQVVMRIIDPQVA 208
Query: 228 QMPILRQGPG 237
+ R+ P
Sbjct: 209 IAMLHRETPA 218
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 29/223 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY +EEQ+++I G VV+FRLV D+ETG+PKG+GF EY D + A SA R
Sbjct: 9 RVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKG-ADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQ 125
NL +++ GR LRVD++ +++G +++N+ Q A D + GG +V
Sbjct: 69 NLNDFDLKGRTLRVDYSNDNRGTSNQNQTQDNNRAPPTAHFDTNQPNGGRP-DASAVPPL 127
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
P G + GVQ+ D ++ + + QL + +S
Sbjct: 128 PQGADLP---------------PGVQA------------LDAISRTINNVPTPQLIDFLS 160
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQ 228
++K + N QA LL P L A+FQA ++L + + Q
Sbjct: 161 QIKGLCASNPAQATALLTQAPQLAYAVFQAMLLLDLVDVNIAQ 203
>gi|320583151|gb|EFW97367.1| Cleavage and polyadenylation factor I (CF I) component [Ogataea
parapolymorpha DL-1]
Length = 654
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 42/229 (18%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +++G IP+D TE+Q+++I R VGPVVS +L+ DRETGK KGY F EY+D ETA SA R
Sbjct: 12 RVIYIGGIPFDQTEDQILDIARSVGPVVSSKLLFDRETGKSKGYAFIEYQDIETARSAVR 71
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL Y I R L+ +F+ + + Q + + +KQ+ P + P
Sbjct: 72 NLNNYAIGNRYLKCNFSSEQAVINTMKSQTS-----SEWAELEKQI--PPL--------P 116
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G+ +A S + S N + LA + +N+L+ ++ +
Sbjct: 117 PGMLMA-------------------------NSSMDSLNQQINAALATLDKNRLHNLVKD 151
Query: 187 MKLMATQNKEQARQLLLAKPP-LLKALFQAQIMLGMATPQVLQMPILRQ 234
K+M + N Q LLL K P LL AL QA ++LG++ + ++ ++ Q
Sbjct: 152 AKIM-SDNHPQLMALLLEKNPQLLFALVQATMILGLSDAEQIKSILVEQ 199
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 2 ASSQHRCV-FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
A++ CV ++G IPY+ E + + GPVV R ++D + K KG+ F EY +
Sbjct: 229 AANNSSCVLYLGAIPYNWDVEIIKSVVCGSGPVVDVRCMMDNAS-KNKGFCFVEYATPDA 287
Query: 61 ALSARRNLQGYEINGR-QLRVDFAE 84
A A + L +I GR +LR++ ++
Sbjct: 288 AARALQILSKIKIEGRKKLRIELSK 312
>gi|414591813|tpg|DAA42384.1| TPA: hypothetical protein ZEAMMB73_312992 [Zea mays]
Length = 286
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 57/66 (86%)
Query: 30 VGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGA 89
+G + + RLVID+ETGKPKGYGFCEYKDEETALSA NLQGYEINGR+L VDFAEN +
Sbjct: 81 IGLLFTNRLVIDKETGKPKGYGFCEYKDEETALSACWNLQGYEINGRRLCVDFAENRRNT 140
Query: 90 DRNREQ 95
D+NRE+
Sbjct: 141 DKNREK 146
>gi|339259154|ref|XP_003369763.1| cleavage stimulation factor [Trichinella spiralis]
gi|316965989|gb|EFV50625.1| cleavage stimulation factor [Trichinella spiralis]
Length = 409
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
CV+VGN+ YDA+EE+L + +VGPVV FRLV D +TGKP GYGFCE+ D ETALSA R+
Sbjct: 17 CVYVGNLSYDASEEELKSLFSKVGPVVGFRLVCDHKTGKPSGYGFCEFLDRETALSAERS 76
Query: 68 LQGYEINGRQLRVDFAENDKGADRNR 93
L +E GR L VD A D D+ R
Sbjct: 77 LNKFEYRGRHLHVD-ATVDSIHDQKR 101
>gi|90085597|dbj|BAE91539.1| unnamed protein product [Macaca fascicularis]
Length = 295
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 67 NL 68
NL
Sbjct: 76 NL 77
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
+T +A + Q+ E+M +MKL + ++AR +LL P L AL QAQ+++ + P++
Sbjct: 84 ITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEI 142
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIP+ TEEQL EI E G +VS RLV+D ETGKPKG+ F EY+D TALSA RNL
Sbjct: 11 VFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNL 70
Query: 69 QGYEINGRQLRVDFAENDK-GADRNR 93
GY+ NGR LRV+F+ N GA++ R
Sbjct: 71 NGYDCNGRLLRVNFSNNSSLGAEQQR 96
>gi|209880680|ref|XP_002141779.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557385|gb|EEA07430.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 313
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 35/232 (15%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
VGN+ +DATE++L E+ VGPV+S R+V D++TG +G+ FCEY+D ET + A +NL
Sbjct: 5 IVGNVAFDATEDELREVMSAVGPVLSIRIVYDKDTGLSRGFSFCEYRDIETCIMAIKNLN 64
Query: 70 GYEINGRQLRVDFAENDKGADRNREQGRGGP----GMAAIVDPQKQLGGPAIHGESVHHQ 125
GYE+ GR +RVD+ D + N P + +P P I G S
Sbjct: 65 GYELRGRAIRVDWTSPDMRSRYNHLVTSNAPIPTSSSGVVTNP------PGIQGVS---- 114
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQ-------LA-SPN---DPLTLHLAK 174
I ++ + Q+ + N + +SQ LA SPN D L+ + +
Sbjct: 115 ------GILSSNTQSTDNMHNQIIIPPNNHNQKSQEDTSVISLAQSPNTSLDGLSAEIIQ 168
Query: 175 ----MSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
M+ QL ++ M+ + QN + AR +LL P AL AQ ++GM
Sbjct: 169 IVQSMTIGQLYYLLGHMQKLIIQNPDTARCILLENPQFCYALLHAQYIVGMV 220
>gi|402080986|gb|EJT76131.1| cleavage stimulation factor 64-kDa subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 304
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY +EEQ+ +I G V++FRLV DRETGKPKG+GF EY D ++A SA R
Sbjct: 8 RVVFVGNIPYGLSEEQITDIFSRAGKVINFRLVYDRETGKPKGFGFAEYPDADSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFA 83
NL EI GR+LRVDF+
Sbjct: 68 NLNDSEIMGRKLRVDFS 84
>gi|340924219|gb|EGS19122.1| putative polyadenylation factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 294
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY TEEQ+ EI G V++FRLV DRETG+PKG+GF E+ D ++A SA R
Sbjct: 8 RVVFVGNIPYGLTEEQITEIFSGAGKVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFA 83
NL YEI GR+LRVDF+
Sbjct: 68 NLNDYEIMGRKLRVDFS 84
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 165 NDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
D ++ L + QL +I+ +MK +AT + +A +LL P L A+FQA +++G+ +P
Sbjct: 132 TDAISRTLNTLPPAQLLDILQQMKTLATTDPARATELLTQAPQLSYAVFQALLIMGLVSP 191
Query: 225 QVL 227
+ +
Sbjct: 192 EAI 194
>gi|428181978|gb|EKX50840.1| hypothetical protein GUITHDRAFT_85230, partial [Guillardia theta
CCMP2712]
Length = 243
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFR-LVIDRETGKPKGYGFCEYKDEET 60
S R VFVGNIPY+ATEEQL +I R VG VVSFR LV + +TG+PKG+GFCE++D +T
Sbjct: 6 GSQASRSVFVGNIPYNATEEQLEDIFRAVGHVVSFRWLVKNSDTGQPKGFGFCEFRDAQT 65
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA RNL E NGR LR+D+A
Sbjct: 66 AESAIRNLNNTEFNGRLLRIDYA 88
>gi|50552626|ref|XP_503723.1| YALI0E09174p [Yarrowia lipolytica]
gi|49649592|emb|CAG79313.1| YALI0E09174p [Yarrowia lipolytica CLIB122]
Length = 253
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 60/75 (80%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V+VG+IPYD TEEQ+++I + VGPV+S +L+ D+ETG+ KGYGF EY D +TA SA R
Sbjct: 4 RVVYVGSIPYDQTEEQMLDIFKSVGPVISLKLMFDKETGRSKGYGFAEYPDADTARSAIR 63
Query: 67 NLQGYEINGRQLRVD 81
NL G+++ RQLRVD
Sbjct: 64 NLNGFQVGSRQLRVD 78
>gi|384253327|gb|EIE26802.1| hypothetical protein COCSUDRAFT_46235 [Coccomyxa subellipsoidea
C-169]
Length = 467
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 27/185 (14%)
Query: 37 RLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQG 96
R+V DR+TG+ KG+ F EY D +TA SA RNL GY++NGR++ V FAE D D G
Sbjct: 8 RIVTDRDTGRQKGFAFIEYYDWQTAQSAIRNLDGYDLNGRKVIVKFAEKDH--DSTARPG 65
Query: 97 RGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNG 156
R G + G A S+ +PIG+ A +A+ + A+ VG G
Sbjct: 66 RDG----------QNRGNKA----SMKPKPIGVEAARSASHSV-----ASLVGSPPPVPG 106
Query: 157 IQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQ 216
+L ++ L +R +L EIM++M+ + QN EQARQ+L+ L KALFQA+
Sbjct: 107 GSGEL------ISSALGTKTRAELYEIMAQMRSLVQQNPEQARQILVQNAQLTKALFQAE 160
Query: 217 IMLGM 221
IMLGM
Sbjct: 161 IMLGM 165
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 511 SALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALL 544
+AL+QQV+ LTPEQ+ LPPEQ+ QV+ L+ A++
Sbjct: 405 AALIQQVMQLTPEQVAGLPPEQQAQVMVLRDAVV 438
>gi|145341802|ref|XP_001415992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576215|gb|ABO94284.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 86
Score = 108 bits (270), Expect = 7e-21, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 59/80 (73%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+GNIPYDATE L ++ EVGPV RLV DR+TGK KGYGF E+ D TA+SA RN+
Sbjct: 6 VFIGNIPYDATETSLRDVFGEVGPVRELRLVADRDTGKLKGYGFVEFDDYATAMSAVRNV 65
Query: 69 QGYEINGRQLRVDFAENDKG 88
G E NGRQLRVD AE KG
Sbjct: 66 NGREYNGRQLRVDHAETMKG 85
>gi|320587389|gb|EFW99869.1| nf-x1 finger transcription factor [Grosmannia clavigera kw1407]
Length = 1597
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIPY +EEQ+ +I G VVSFRLV DRE GKPKG+GF EY D ++A SA RNL
Sbjct: 1283 VFVGNIPYGLSEEQISDIFSSAGRVVSFRLVYDRENGKPKGFGFAEYPDSDSAASAVRNL 1342
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
YE+ GR+LRVDF+ N+ G E G GG
Sbjct: 1343 NDYEVMGRKLRVDFS-NEGG-----EDGHGG 1367
>gi|171695986|ref|XP_001912917.1| hypothetical protein [Podospora anserina S mat+]
gi|170948235|emb|CAP60399.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 111/242 (45%), Gaps = 56/242 (23%)
Query: 7 RCVFVGNIPYDA---------------------TEEQLIEICREVGPVVSFRLVIDRETG 45
R VFVGNIPY TEEQ+ EI G V++FRLV DRETG
Sbjct: 8 RVVFVGNIPYGKSSRSYYVFSKSIANNPLSAGLTEEQITEIFSGAGRVLNFRLVYDRETG 67
Query: 46 KPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAI 105
+PKG+GF E+ D ++A SA RNL YEI GR+LRVDF+ + G +AA
Sbjct: 68 RPKGFGFAEFPDHDSASSAVRNLNDYEIMGRKLRVDFSNETGPSAAGYSAPSNGNNVAAP 127
Query: 106 VDPQKQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPN 165
V P G S+ P G + GV S
Sbjct: 128 VVPAG--------GSSLPPLPQGKDLP---------------PGV------------SCT 152
Query: 166 DPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
D ++ L + QL +I+ +MK +AT + + +LL P L A+FQA +++G+ +P
Sbjct: 153 DAISQTLRTLPPAQLLDIIQQMKTLATNDPARCAELLNQAPQLGYAVFQALLIMGLVSPD 212
Query: 226 VL 227
+
Sbjct: 213 AI 214
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 62/83 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY +EEQ+++I G VV+FRLV D+ETG+PKG+GF EY D + A SA R
Sbjct: 9 RVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGA 89
NL ++NGR LRVD++ +++ A
Sbjct: 69 NLNESDLNGRTLRVDYSNDNRSA 91
>gi|340520767|gb|EGR51003.1| predicted protein [Trichoderma reesei QM6a]
Length = 307
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNIPY +EEQ+ +I G V FRLV D ETG+PKG+GF +Y D ++A SA R
Sbjct: 8 RVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRN 92
NL YEI GR+LRVDF+ K D +
Sbjct: 68 NLNEYEIMGRKLRVDFSNEQKSGDDD 93
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 165 NDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
D ++ L + QL +I+S+MK +AT ++A +LL P L A+FQA +++G+ +P
Sbjct: 135 TDSISRTLNTLPPPQLLDILSQMKALATSEPQRATELLQQAPQLAYAVFQALLLMGLVSP 194
Query: 225 QVLQ 228
+ +Q
Sbjct: 195 EAIQ 198
>gi|353234844|emb|CCA66865.1| related to Cleavage stimulation factor [Piriformospora indica DSM
11827]
Length = 304
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 17/96 (17%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK---------- 56
R VFVGNIPY+ EEQL++I VG V FRLV DRETGKPKGYGFCEY
Sbjct: 3 RVVFVGNIPYNFAEEQLVQIFSSVGTVTGFRLVFDRETGKPKGYGFCEYLGTDTLHFFVA 62
Query: 57 -------DEETALSARRNLQGYEINGRQLRVDFAEN 85
+ ETA SA RNL G E+ GR LR+D A++
Sbjct: 63 SSVSIKPNHETAQSAVRNLNGKEVGGRPLRIDLADS 98
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 27/33 (81%)
Query: 512 ALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALL 544
A+L QVL +TPEQ+N++P +R+ ++QL++ LL
Sbjct: 269 AILLQVLKMTPEQINAMPAGEREAILQLRKQLL 301
>gi|357116675|ref|XP_003560104.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 230
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 89/182 (48%), Gaps = 45/182 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V+VGNIP+ ATE+++ + C +GPV+SFRL D TGK KGY F EY D+ TA SA R
Sbjct: 17 RVVYVGNIPFHATEKEVRDACELIGPVLSFRLAADAATGKRKGYAFVEYADDATARSACR 76
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G+ + GR LRV A D+ + R R G H P
Sbjct: 77 NLHGHPLRGRDLRVGLA--DRASIRRRRHG--------------------------DHDP 108
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
IG+ AI AA+++ A A + + HLA +SR+QL E +E
Sbjct: 109 IGMDDAIHAASLVDSAARPAVIA-----------------SMARHLAGLSRHQLREAAAE 151
Query: 187 MK 188
+
Sbjct: 152 FE 153
>gi|290998389|ref|XP_002681763.1| predicted protein [Naegleria gruberi]
gi|284095388|gb|EFC49019.1| predicted protein [Naegleria gruberi]
Length = 87
Score = 105 bits (263), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 60/78 (76%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
RCVF+GNI YDA+ ++L +I E G VV+FR+V DRET KPKGY FCE+ DE +A +A +
Sbjct: 10 RCVFIGNIAYDASTDKLKQIFNEAGQVVNFRMVFDRETNKPKGYAFCEFIDEGSASNAMK 69
Query: 67 NLQGYEINGRQLRVDFAE 84
L G + NGR+LRVDFA+
Sbjct: 70 TLDGRDFNGRKLRVDFAD 87
>gi|452004814|gb|EMD97270.1| hypothetical protein COCHEDRAFT_1025717 [Cochliobolus
heterostrophus C5]
Length = 317
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 121/224 (54%), Gaps = 32/224 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY TEE ++E VG V +FRLV D+ETG+PKG+GF E+ D + A SA R
Sbjct: 9 RVVFIGNIPYGGTEELIVETLGRVGQVNNFRLVYDKETGRPKGFGFAEFADADAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL Y++ GR+LRVD++ N+ G+ N R DP Q P
Sbjct: 69 NLNDYDLMGRKLRVDWS-NESGSGDNAPSSR---------DPNTQ-------------AP 105
Query: 127 IGLH---IAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEI 183
+G++ A+ A + LG GV+ N L P D ++ L+ + +QL +I
Sbjct: 106 MGMNGQPAAVPPPAQPSSTLGPLPPGVELPPN-----LTCP-DAISRTLSTLPPDQLLDI 159
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+S+MK + + +A +LL P L A+FQ+ ++L + PQ+L
Sbjct: 160 LSQMKGLVMTDPAKATELLRQAPQLAYAIFQSLLLLQLVDPQIL 203
>gi|413925874|gb|AFW65806.1| hypothetical protein ZEAMMB73_150535 [Zea mays]
Length = 472
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 38 LVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQ 95
LVID+ETGKPK YGFCEYKD+ET LSA RNLQGYEINGRQLRVDFAEN + RNRE+
Sbjct: 370 LVIDKETGKPKCYGFCEYKDKETGLSAWRNLQGYEINGRQLRVDFAENGRNTYRNREK 427
>gi|451853382|gb|EMD66676.1| hypothetical protein COCSADRAFT_24758 [Cochliobolus sativus ND90Pr]
Length = 317
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 120/224 (53%), Gaps = 32/224 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY TEE ++E VG V +FRLV D+ETG+PKG+GF E+ D + A SA R
Sbjct: 9 RVVFIGNIPYGGTEELIVETLGRVGQVNNFRLVYDKETGRPKGFGFAEFADADAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL Y++ GR+LRVD++ N+ G+ N R DP Q P
Sbjct: 69 NLNDYDLMGRKLRVDWS-NESGSGDNAPSSR---------DPNTQ-------------AP 105
Query: 127 IGLH---IAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEI 183
+G++ A+ + LG GV+ N L P D ++ L+ + +QL +I
Sbjct: 106 MGMNGQPAAVPPPVQPSSTLGPLPPGVELPPN-----LTCP-DAISRTLSTLPPDQLLDI 159
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+S+MK + + +A +LL P L A+FQ+ ++L + PQ+L
Sbjct: 160 LSQMKGLVMTDPAKATELLRQAPQLAYAIFQSLLLLQLVDPQIL 203
>gi|321460847|gb|EFX71885.1| hypothetical protein DAPPUDRAFT_93311 [Daphnia pulex]
Length = 81
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 58/73 (79%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIPY +E+QL I E GPVVSFR+V DRETG+ +G+GFCE++ ++A +A RNL
Sbjct: 4 VFVGNIPYGVSEDQLKAIFSEAGPVVSFRIVQDRETGRSRGFGFCEFQSPDSAQTAMRNL 63
Query: 69 QGYEINGRQLRVD 81
GYE+NGR LRVD
Sbjct: 64 NGYELNGRSLRVD 76
>gi|330920796|ref|XP_003299157.1| hypothetical protein PTT_10092 [Pyrenophora teres f. teres 0-1]
gi|311327309|gb|EFQ92770.1| hypothetical protein PTT_10092 [Pyrenophora teres f. teres 0-1]
Length = 213
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 120/224 (53%), Gaps = 34/224 (15%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY TEE +IE VG V +FRLV D+ETG+PKG+GF E+ D + A SA R
Sbjct: 9 RVVFIGNIPYGGTEELIIETLGRVGQVNNFRLVYDKETGRPKGFGFAEFADADAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADR---NREQGRGGPGMAAIVDPQKQLGGPAIHGESVH 123
NL Y++ GR+LRVD++ D NR+QG PA++G+
Sbjct: 69 NLNDYDLMGRKLRVDWSNESGSGDNAPSNRDQG----------------APPAMNGQQAA 112
Query: 124 HQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEI 183
AAA + ALG GV+ + L P D ++ L+ + +QL +I
Sbjct: 113 A---------PAAAQPSSALGPLPPGVE-----LPPNLTCP-DAISRTLSTLPPDQLLDI 157
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+S+MK + + +A +LL P L A+FQ+ ++L + PQ+L
Sbjct: 158 LSQMKGLVMTDPAKATELLRQAPQLAYAIFQSLLLLQLVDPQIL 201
>gi|413917648|gb|AFW57580.1| hypothetical protein ZEAMMB73_591043 [Zea mays]
Length = 287
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 50/58 (86%)
Query: 38 LVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQ 95
LVID+ETGKPKGYGFCEYKDEET LSA R+LQGYEING QL VDFAEN + D NRE+
Sbjct: 222 LVIDKETGKPKGYGFCEYKDEETVLSACRDLQGYEINGCQLCVDFAENGRNTDSNREK 279
>gi|156841306|ref|XP_001644027.1| hypothetical protein Kpol_1026p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156114660|gb|EDO16169.1| hypothetical protein Kpol_1026p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 277
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQL+++CR VGPVV+ +L+ D +TGK KGY F EYKD ET+ SA R
Sbjct: 14 RVVYLGSIPYDQTEEQLLDLCRNVGPVVNLKLMFDPQTGKSKGYAFVEYKDLETSASAVR 73
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY I R L+ ++ N
Sbjct: 74 NLNGYPIGSRFLKCGYSSN 92
>gi|367006043|ref|XP_003687753.1| hypothetical protein TPHA_0K01870 [Tetrapisispora phaffii CBS 4417]
gi|357526058|emb|CCE65319.1| hypothetical protein TPHA_0K01870 [Tetrapisispora phaffii CBS 4417]
Length = 289
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 25/214 (11%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +++G+IPYD TEEQ++++C VGPVV+ +++ D +TG+ KGY F EYKD ET+ SA R
Sbjct: 16 RVIYIGSIPYDQTEEQILDLCSNVGPVVNLKMMFDPQTGRSKGYAFVEYKDLETSASAVR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQL-GGPAIHGESVHHQ 125
NL GY++ R L+ ++ N +D + G + I D L G HG +V +
Sbjct: 76 NLNGYQVGSRLLKCGYSSN---SDISGSAGNDNNDNSNIHDINGNLSNGMMKHGGNVEY- 131
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
+ GV N N + +P ++ LAK+ +++ I+
Sbjct: 132 -------------IDSKFLNLPNGVDVNIN-----MTTPAMMISSELAKIDKSEQLVILD 173
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIML 219
+ ++++E+A +LL P L+ ++ A+++L
Sbjct: 174 NFQKYCSEHEEEASELLNEFPQLIYSI--AELLL 205
>gi|403333180|gb|EJY65667.1| Cleavage stimulation factor 64 [Oxytricha trifallax]
Length = 285
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 59/88 (67%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
C+F GNIPYDATE+ L E GP + FRL D +T +PKG+GFCEY+D + A A RN
Sbjct: 73 CIFFGNIPYDATEQDLRETLNLAGPFMEFRLKTDPKTNQPKGFGFCEYRDPDIAACALRN 132
Query: 68 LQGYEINGRQLRVDFAENDKGADRNREQ 95
L EINGR L+VDFA ++K +E+
Sbjct: 133 LNKSEINGRNLKVDFASDNKNGTNLKEE 160
>gi|432093793|gb|ELK25680.1| Cleavage stimulation factor subunit 2 [Myotis davidii]
Length = 597
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 97/200 (48%), Gaps = 57/200 (28%)
Query: 32 PVVSF--RLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGA 89
P +F RLV DRETGKPKGYGFCEY+D+ETALSA RNL G E +GR LRVD A ++K
Sbjct: 59 PFSTFGVRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 118
Query: 90 DRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVG 149
+ + G G P I P +GE++
Sbjct: 119 EELKSLGTGAP---VIESP---------YGETI--------------------------- 139
Query: 150 VQSNQNGIQSQLASPNDP---LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKP 206
SP D ++ +A + Q+ E+M +MKL + ++AR +LL P
Sbjct: 140 -------------SPEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNP 186
Query: 207 PLLKALFQAQIMLGMATPQV 226
L AL QAQ+++ + P++
Sbjct: 187 QLAYALLQAQVVMRIVDPEI 206
>gi|159462614|ref|XP_001689537.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283525|gb|EDP09275.1| predicted protein [Chlamydomonas reinhardtii]
Length = 73
Score = 103 bits (257), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/73 (64%), Positives = 56/73 (76%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
VGNIPYD TE+ L ++ +VG + S R+V D++TGKPKGYGFCEY D TA SA RNL
Sbjct: 1 VGNIPYDVTEQMLQDMFSQVGAIKSLRMVTDKDTGKPKGYGFCEYHDVGTAQSAVRNLNK 60
Query: 71 YEINGRQLRVDFA 83
YE+NGR LRVDFA
Sbjct: 61 YEVNGRMLRVDFA 73
>gi|302850277|ref|XP_002956666.1| hypothetical protein VOLCADRAFT_107323 [Volvox carteri f.
nagariensis]
gi|300258027|gb|EFJ42268.1| hypothetical protein VOLCADRAFT_107323 [Volvox carteri f.
nagariensis]
Length = 2378
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 95/183 (51%), Gaps = 31/183 (16%)
Query: 38 LVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN---DKGADRNRE 94
LV D++TGKPKGYGFCE+ D +TA SA RNL YE+NGR LRVDFA+ D R++E
Sbjct: 1792 LVADKDTGKPKGYGFCEFHDVQTAQSAVRNLNKYEVNGRMLRVDFADEHTQDARGKRDKE 1851
Query: 95 ----QGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGV 150
+GR GP + P +PIG A AAA M LG A
Sbjct: 1852 PRGPEGRRGPEQSLAPGPPPGT------------RPIGREAAGAAAAQMNALLGNAPYTG 1899
Query: 151 QSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLK 210
S + ++ +A M+ QL EI+S+M+ + QN AR +L+A P L K
Sbjct: 1900 PSQEK------------ISTVIAGMTPMQLFEILSQMRTLCQQNHAAARSILVANPQLTK 1947
Query: 211 ALF 213
ALF
Sbjct: 1948 ALF 1950
>gi|66814070|ref|XP_641214.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60469249|gb|EAL67244.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 541
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGNIPY+A E+ LIEI VG VVSFRL+ D+++ K KGYGFCEY++ + ALSA R
Sbjct: 3 KSVFVGNIPYEANEKDLIEIFSGVGKVVSFRLLEDKDSKKSKGYGFCEYENVDNALSAIR 62
Query: 67 NLQGYEINGRQLRVDFAENDKGAD 90
N + R LRV +A+N+K ++
Sbjct: 63 NYMLFTFGNRVLRVSYADNEKASE 86
>gi|367015616|ref|XP_003682307.1| hypothetical protein TDEL_0F02850 [Torulaspora delbrueckii]
gi|359749969|emb|CCE93096.1| hypothetical protein TDEL_0F02850 [Torulaspora delbrueckii]
Length = 279
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 64/96 (66%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ V++G+IPYD TEEQ++++C VGPV + +++ D +TGK KGY F EYKD E++ SA R
Sbjct: 16 KVVYLGSIPYDQTEEQILDLCSNVGPVTNLKMMFDPQTGKSKGYAFVEYKDLESSASAVR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGM 102
NL GY+ R L+ +A N + + Q GPG+
Sbjct: 76 NLNGYQFGSRLLKCGYASNSDISVSDSSQQHSGPGL 111
>gi|50286493|ref|XP_445675.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524980|emb|CAG58586.1| unnamed protein product [Candida glabrata]
Length = 280
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPVVS +++ D +TGK KGY F +Y+D E++ SA R
Sbjct: 16 RVVYLGSIPYDQTEEQILDLCSNVGPVVSLKMMFDSQTGKSKGYAFVQYQDLESSASAVR 75
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHH-Q 125
NL GY++ R L+ ++ N D QG G +A+ + +++ +I+ Q
Sbjct: 76 NLNGYQLGSRLLKCGYSSNSDITD----QGVGNANNSAMDEYNEEMLSNSINRRFPQLPQ 131
Query: 126 PIGLHIAITAAAVMTGA 142
+ ++I +T A+M +
Sbjct: 132 GVDVNINMTTPAMMISS 148
>gi|428177517|gb|EKX46396.1| hypothetical protein GUITHDRAFT_70536, partial [Guillardia theta
CCMP2712]
Length = 82
Score = 102 bits (254), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIPY A+E+QL E+ GPV++FRLV+ ETG PKG+GFCE++D E+A A RNL
Sbjct: 1 VFVGNIPYTASEDQLQEVFETAGPVLAFRLVLHPETGAPKGFGFCEFRDVESAEIAVRNL 60
Query: 69 QGYEINGRQLRVDFAEN 85
YE+NGR LRVDFA +
Sbjct: 61 NNYEMNGRPLRVDFASS 77
>gi|365986010|ref|XP_003669837.1| hypothetical protein NDAI_0D02800 [Naumovozyma dairenensis CBS 421]
gi|343768606|emb|CCD24594.1| hypothetical protein NDAI_0D02800 [Naumovozyma dairenensis CBS 421]
Length = 315
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 2 ASSQH-----RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK 56
+ SQH R V++G+IPYD TEEQ++++C VGPVV+ +++ D++TG+ KGY F E+K
Sbjct: 37 SGSQHYNQPSRIVYLGSIPYDQTEEQILDLCNNVGPVVNLKMMFDQQTGRSKGYAFIEFK 96
Query: 57 DEETALSARRNLQGYEINGRQLRVDFAEND 86
D ET+ SA RNL GY++ R LR ++ N+
Sbjct: 97 DLETSASAIRNLNGYQLGSRFLRCGYSSNN 126
>gi|396500440|ref|XP_003845719.1| hypothetical protein LEMA_P010270.1 [Leptosphaeria maculans JN3]
gi|312222300|emb|CBY02240.1| hypothetical protein LEMA_P010270.1 [Leptosphaeria maculans JN3]
Length = 310
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 119/221 (53%), Gaps = 31/221 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY TEE ++E VG V +FRLV D+ETG+PKG+GF E+ D + A SA R
Sbjct: 9 RVVFIGNIPYGGTEEMIVETLGRVGQVNNFRLVYDKETGRPKGFGFAEFADADAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL Y+I GR+LRVD++ N+ G+ N P + PA++G+
Sbjct: 69 NLNDYDIMGRKLRVDWS-NESGSGDNA--------------PPRDNPPPAMNGQPPAP-- 111
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
A A + ALG GV+ N L P D ++ L+ + +QL +I+S+
Sbjct: 112 --------APAPQSSALGPLPPGVELPPN-----LTCP-DSISRTLSTLPPDQLLDILSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
MK + + +A +LL P L A+FQ+ ++L + P +L
Sbjct: 158 MKGLVMTDPAKATELLRQAPQLAYAIFQSLLLLQLVDPTIL 198
>gi|242094062|ref|XP_002437521.1| hypothetical protein SORBIDRAFT_10g028650 [Sorghum bicolor]
gi|241915744|gb|EER88888.1| hypothetical protein SORBIDRAFT_10g028650 [Sorghum bicolor]
Length = 225
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 61/223 (27%)
Query: 7 RC---VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETG---KPKGYGFCEYKDEET 60
RC VFVGNIPY A+E++L C E+GPVVS R+ D + G +P+G+ F EY D+ET
Sbjct: 9 RCSSVVFVGNIPYHASEDELRAACEEIGPVVSLRVATDNKGGGSRRPRGFAFVEYLDDET 68
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
ALSA RNL G + GR LRV A+ D
Sbjct: 69 ALSACRNLHGRALRGRDLRVGLAQRTPPPD------------------------------ 98
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
V +P+G+ A AA+++ A P +T +LA +SR QL
Sbjct: 99 -VDEEPVGVEGATHAASLLH---------------------ARPRGAVTSYLAGLSRRQL 136
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMAT 223
E++ ++ E A++ L++ QA+++L MA+
Sbjct: 137 RELLDALEREDAALMEHAKREFAGLSTLIE---QARVLLDMAS 176
>gi|255634660|gb|ACU17692.1| unknown [Glycine max]
Length = 387
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 187/427 (43%), Gaps = 103/427 (24%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA-TPQV 226
L+++LA MS+NQL +IMS+MK + QN++QA+Q+L+ P L KALFQAQIMLGM PQ
Sbjct: 11 LSVNLAGMSKNQLYDIMSQMKSLIEQNQQQAKQILIQNPMLTKALFQAQIMLGMVQAPQT 70
Query: 227 LQ--MPILRQGPGHPAQPLFQDGQQQVAQLPGLPPLAQKMQLMPKVQEAQIQLHNQ---- 280
+ P++ Q QP + Q LPGL Q V + QI L
Sbjct: 71 VPKVQPMVPQNNLQSVQPTQKPNIQPAPLLPGL----GGAQDQAGVSQTQIPLRKHQNQP 126
Query: 281 ----------FSAATQPTLHPQIQLPQNAKNQALQQ---ASLPGQSGIPMLPSMHPSVRP 327
S +QP + +PQ K Q ASLP S +P +PS PS+
Sbjct: 127 SVPVSSAVPALSHQSQPMAAQSLTMPQQPKGHLAPQVALASLPQSSQLPNIPS--PSLH- 183
Query: 328 QIQLANSSSLNQQVHPPSLENQVQVSASNLGQNTWT------KLP----NSAMRSSFLPH 377
SL+Q +HP Q+ ++S+L T LP AM + +
Sbjct: 184 --------SLSQPLHP----TQMSTASSHLQHPLLTPGFPHMPLPPQIRQPAMPTFHPQY 231
Query: 378 PPS----------------SDAGFQPGPSTSAGIGQTVSRD--AERSARVPEDGTRAHRN 419
PP S + F PG A +G T + +++S++ P
Sbjct: 232 PPQMGANLGFQHAGASHNLSQSMFHPGTKPPASVGSTFPQGLPSQKSSQPPYQVGNVPSG 291
Query: 420 NAYTNM---SMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPS 476
+ N +M + S + P D+++H G + V S
Sbjct: 292 PEFGNQAGNAMQVDRGASLMPGPSDNLAH------LSGPPGPPYVV-------------S 332
Query: 477 QAFGAGLVPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSLPPEQRQQV 536
GA P+ + P ++PD+E ALLQQV+SLTPEQ+N LPPEQR QV
Sbjct: 333 GQMGAANQPL--------------RPPALTPDMEKALLQQVMSLTPEQINLLPPEQRNQV 378
Query: 537 IQLQQAL 543
+QLQQ L
Sbjct: 379 LQLQQML 385
>gi|448079287|ref|XP_004194363.1| Piso0_004851 [Millerozyma farinosa CBS 7064]
gi|359375785|emb|CCE86367.1| Piso0_004851 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M +S+ + V++GNIP+D TEEQ++EI R VGPV+ +L+ D TGK KGY F Y D ET
Sbjct: 1 MDNSKSKSVYIGNIPFDHTEEQVLEIARSVGPVLDLKLLFDSMTGKSKGYAFVRYSDHET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRN 92
A SA RNL I R L+ F+ ++ + N
Sbjct: 61 AASAVRNLNNLTIGNRSLKCSFSNDNSSFNDN 92
>gi|357116673|ref|XP_003560103.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 233
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 88/182 (48%), Gaps = 45/182 (24%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V+VGNIP+ A+E+++ + C +GPV+SFRL D TGK KGY F EY D+ TA SA R
Sbjct: 17 RVVYVGNIPFHASEKEVRDACELIGPVLSFRLAADAATGKRKGYAFVEYADDATARSACR 76
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G+ + GR LRV A D+ + R R G H P
Sbjct: 77 NLHGHPLRGRDLRVPLA--DRASIRRRRHG--------------------------DHDP 108
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
IG+ AI AA+++ A A + + HLA +SR+Q E +E
Sbjct: 109 IGMDDAIHAASLVDSAARPAVIA-----------------SMARHLAGLSRHQPREAAAE 151
Query: 187 MK 188
+
Sbjct: 152 FE 153
>gi|169599723|ref|XP_001793284.1| hypothetical protein SNOG_02685 [Phaeosphaeria nodorum SN15]
gi|160705306|gb|EAT89416.2| hypothetical protein SNOG_02685 [Phaeosphaeria nodorum SN15]
Length = 340
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 120/221 (54%), Gaps = 23/221 (10%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VF+GNIPY TEE +IE VG V +FRLV D+ETG+PKG+GF E+ D + A SA R
Sbjct: 30 RVVFIGNIPYGGTEELIIETLGRVGQVNNFRLVYDKETGRPKGFGFAEFADADAAASAVR 89
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +EI GR+LRVD++ ND GA G P PQ Q P ++G++ +P
Sbjct: 90 NLNDHEIMGRKLRVDWS-NDNGA------GDNAPSNQPQNPPQNQGAYPPMNGQA--PEP 140
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ A + AL G+ N L P D ++ L+ + QL +I+S+
Sbjct: 141 V--------QAPQSSALPPLPPGIDLPPN-----LTCP-DAISRTLSTLPTPQLLDILSQ 186
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
MK + + +A +LL P L A+FQ+ ++L + P+ L
Sbjct: 187 MKGLVMTDPAKATELLRQAPQLAYAIFQSLLLLELVDPRTL 227
>gi|254569922|ref|XP_002492071.1| Cleavage and polyadenylation factor I (CF I) component
[Komagataella pastoris GS115]
gi|238031868|emb|CAY69791.1| Cleavage and polyadenylation factor I (CF I) component
[Komagataella pastoris GS115]
gi|328351439|emb|CCA37838.1| Cleavage stimulation factor 64 kDa subunit, tau variant
Short=CSTF 64 kDa subunit, tau variant; , tau variant
[Komagataella pastoris CBS 7435]
Length = 245
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ V++G++P+D TE+Q++E+ R VGPVV F+L D+ETGKPKGY + EY+D ETA SA R
Sbjct: 6 KVVYLGSLPFDQTEQQVLEVARSVGPVVDFKLFFDQETGKPKGYAYVEYQDMETAASAVR 65
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRG 98
NL Y + R ++ ++ D E G G
Sbjct: 66 NLNNYTMGNRNIKCSYSGRLSIEDNIAESGDG 97
>gi|294900935|ref|XP_002777187.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239884648|gb|EER09003.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 367
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 1 MASSQHRCV--FVGNIP------YDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGF 52
M Q C N+P YD EEQL I VGPVVSFRL+ D+ TG+PKGYGF
Sbjct: 1 MVGGQGNCYGSTTSNVPTAKPELYDVDEEQLKSIFSTVGPVVSFRLMHDKVTGRPKGYGF 60
Query: 53 CEYKDEETALSARRNLQGYEINGRQLRVDFAE----NDKGADRNREQGRGGPGMAAIVDP 108
CEY D+ETA +A RNL E GR LRVD+A+ N +G R+ ++ G + +
Sbjct: 61 CEYADQETAYAAMRNLNNVECGGRPLRVDWADHELRNTEGVQRSIQRSGADVGRSNVKVN 120
Query: 109 QKQL 112
K+L
Sbjct: 121 NKKL 124
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 116/263 (44%), Gaps = 59/263 (22%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNI YD TEE + +I + G V+S ++V DRETGKPKGYGF E+ D TA +A R
Sbjct: 12 RSVFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEFPDIATADTAIR 71
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
L GYE+ GR LRVD A GG M GPAI
Sbjct: 72 VLNGYELGGRVLRVDSAA-------------GGMNMEEFGSSNN---GPAI--------- 106
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
V+ N G + + ++ +A ++ ++ E+M +
Sbjct: 107 -----------------------VEENPYGPECDAGKAPERISQTVASLAPEKMFELMKQ 143
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGP---------G 237
++ N + +L+ P L A+ QA +++ + PQ + R P G
Sbjct: 144 LQEALKNNPAELNSILVENPQLSYAVLQAAVVMRIVDPQTALGLLHRNNPATMNPFHQAG 203
Query: 238 HPAQP-LFQDGQQQVAQLPGLPP 259
+PA P + QQQ LP LPP
Sbjct: 204 NPAGPSMVPPAQQQQMPLP-LPP 225
>gi|448083879|ref|XP_004195464.1| Piso0_004851 [Millerozyma farinosa CBS 7064]
gi|359376886|emb|CCE85269.1| Piso0_004851 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M +S+ + V++GNIP+D TEEQ+++I R VGPV+ +L+ D TGK KGY F Y D ET
Sbjct: 1 MDNSKSKNVYIGNIPFDHTEEQVLDIARSVGPVLDLKLLFDSMTGKSKGYAFVRYSDHET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRN 92
A SA RNL I R L+ F+ ++ + N
Sbjct: 61 AASAVRNLNNLTIGNRSLKCSFSNDNSSFNDN 92
>gi|358369876|dbj|GAA86489.1| polyadenylation factor subunit CstF64 [Aspergillus kawachii IFO
4308]
Length = 294
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 31/222 (13%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA + VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D +
Sbjct: 1 MAPGAGKSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMMNPETGKPKGYGFADFADADA 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A SA RNL YEI GR++RVD+ N++ +I QL PA+
Sbjct: 61 AASAVRNLNDYEIMGRKIRVDWPHNNEK--------------DSIPPDYSQLSAPAVQDG 106
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
S + L GV+ + L PN ++ LA + NQL
Sbjct: 107 SQ-----------QQQQQQSAPLPPLPPGVE-----VPPHLDCPNA-ISQTLASLPPNQL 149
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
+++S+MK + + +A +LL P L A+FQA +++ +
Sbjct: 150 LDVLSQMKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 191
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 48/220 (21%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNI YD TE+ + + + GPV+S ++V DRETGKPKGYGF E+ D +TA +A R
Sbjct: 17 RSVFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTADTAIR 76
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
L G+E+ GR LRVD A GG M P GPAI
Sbjct: 77 VLNGHELGGRILRVDSAA-------------GGMNMEEFGQPN---AGPAI--------- 111
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
V+ N G + + ++ +A ++ ++ E+M +
Sbjct: 112 -----------------------VEENPYGPECDAGKAPERISQTVASLAPEKMFELMKQ 148
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQV 226
++ N + +L+ P L A+ QA +++ + PQ
Sbjct: 149 LQEALKNNPAELNSVLVENPQLSYAVLQAAVVMRIVDPQT 188
>gi|403215572|emb|CCK70071.1| hypothetical protein KNAG_0D03250 [Kazachstania naganishii CBS
8797]
Length = 269
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 8/104 (7%)
Query: 4 SQH----RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEE 59
SQH +CV+VG+IPYD TE+Q++++C GPV FR+V D +TG+ +GY F EY+D E
Sbjct: 2 SQHNARSKCVYVGSIPYDQTEQQVLDLCSNAGPVARFRMVFDPQTGRSRGYAFAEYRDLE 61
Query: 60 TALSARRNLQGYEINGRQLRVDFAENDKGAD-RNREQGRGGPGM 102
++ +A RNL GY + R L+ +A G+D N G G G+
Sbjct: 62 SSAAAVRNLNGYPLGSRHLKCGYA---TGSDLDNNNSGSAGGGL 102
>gi|350636893|gb|EHA25251.1| hypothetical protein ASPNIDRAFT_186218 [Aspergillus niger ATCC
1015]
Length = 295
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 31/222 (13%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA + VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D +
Sbjct: 1 MAPGAGKSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMMNPETGKPKGYGFADFADADA 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A SA RNL YEI GR++RVD+ N++ +I QL PA+
Sbjct: 61 AASAVRNLNDYEIMGRKIRVDWPHNNEK--------------DSIPPDYSQLSAPAVQDG 106
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
S + L GV+ + L PN ++ LA + NQL
Sbjct: 107 SQ-----------QQQQQQSAPLPPLPPGVE-----VPPHLDCPNA-ISQTLASLPPNQL 149
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
+++S+MK + + +A +LL P L A+FQA +++ +
Sbjct: 150 LDVLSQMKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 191
>gi|366987515|ref|XP_003673524.1| hypothetical protein NCAS_0A05830 [Naumovozyma castellii CBS 4309]
gi|342299387|emb|CCC67141.1| hypothetical protein NCAS_0A05830 [Naumovozyma castellii CBS 4309]
Length = 314
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 60/80 (75%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TGK KGY F E+KD ET+ SA R
Sbjct: 44 RIVYLGSIPYDQTEEQILDLCNNVGPVINLKMMFDPQTGKSKGYAFIEFKDLETSASAIR 103
Query: 67 NLQGYEINGRQLRVDFAEND 86
NL GY++ R L+ ++ N+
Sbjct: 104 NLNGYQLGSRFLKCGYSSNN 123
>gi|321261626|ref|XP_003195532.1| polyadenylation factor 64 kDasubunit [Cryptococcus gattii WM276]
gi|317462006|gb|ADV23745.1| Polyadenylation factor 64 kDasubunit, putative [Cryptococcus
gattii WM276]
Length = 452
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M + + VFV NIPYD +EEQL + E GPV + + D TG+ KGY F ++ DE T
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEAT 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRG 98
ALSA RNLQ +NGR LRV+ + ++ G R R G G
Sbjct: 61 ALSAVRNLQDAPVNGRNLRVELSTDEPGP-RRRGAGPG 97
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 166 DPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
D ++ LA ++ Q+ ++M+ MK + N +QARQLL +P L ALFQA ++L + P
Sbjct: 203 DTISKTLAGIAPGQMGDVMTSMKSLIQTNPDQARQLLSQQPQLAYALFQAMLLLNLLDPS 262
Query: 226 VL 227
VL
Sbjct: 263 VL 264
>gi|410080932|ref|XP_003958046.1| hypothetical protein KAFR_0F03150 [Kazachstania africana CBS 2517]
gi|372464633|emb|CCF58911.1| hypothetical protein KAFR_0F03150 [Kazachstania africana CBS 2517]
Length = 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 63/96 (65%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TE+Q++++C VGPV + +++ D TGK KGY F E+KD E++ SA R
Sbjct: 21 RIVYLGSIPYDQTEQQILDLCNNVGPVTNLKMMFDPTTGKSKGYAFIEFKDLESSASAIR 80
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGM 102
NL GY++ R L+ ++ N+ ++ N G M
Sbjct: 81 NLNGYQLGSRFLKCGYSTNNDISNMNTTSTVSGGNM 116
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 56/77 (72%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNI YD +E+ + I + G V+S ++V DRETGKPKGYGF E+ D +TA A R
Sbjct: 18 RSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
Query: 67 NLQGYEINGRQLRVDFA 83
NL GYE++GR LRVD A
Sbjct: 78 NLNGYELSGRILRVDSA 94
>gi|145246594|ref|XP_001395546.1| polyadenylation factor subunit CstF64 [Aspergillus niger CBS
513.88]
gi|134080264|emb|CAK97167.1| unnamed protein product [Aspergillus niger]
Length = 295
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA + VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D +
Sbjct: 1 MAPGAGKSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMMNPETGKPKGYGFADFADADA 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A SA RNL YEI GR++RVD+ N++ +I QL P +
Sbjct: 61 AASAVRNLNDYEIMGRKIRVDWPHNNEK--------------DSIPPDYSQLSAPTVQDG 106
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
S + L GV+ + L PN ++ LA + NQL
Sbjct: 107 SQ-----------QQQQQQSAPLPPLPPGVE-----VPPHLDCPNA-ISQTLASLPPNQL 149
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
+++S+MK + + +A +LL P L A+FQA +++ +
Sbjct: 150 LDVLSQMKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 191
>gi|344232835|gb|EGV64708.1| hypothetical protein CANTEDRAFT_113492 [Candida tenuis ATCC 10573]
Length = 232
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 62/279 (22%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGNIPYD TEEQ++EI VGPV RL+ D +GK KGY F +Y D ETA SA RNL
Sbjct: 6 VYVGNIPYDYTEEQVLEIASSVGPVDDLRLLFDPVSGKSKGYAFVKYSDRETAASAVRNL 65
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIG 128
+ I R L+ + E + G I E + P+G
Sbjct: 66 NNHSIGNRNLKCSLS---------NETSQFETG---------------IENEELPPLPLG 101
Query: 129 LHIA--ITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ I T V++ L + Q AS +I+ E
Sbjct: 102 VQIFPNQTTGQVISSILST-----------LDEQTAS------------------QILKE 132
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPLFQD 246
K M++ N +LL P L AL + I+L + TP+ +++ I R+ +P+FQ
Sbjct: 133 AKDMSSTNPIMMERLLEKCPQLAHALAETAILLNVTTPETVEICINRK-----KRPIFQL 187
Query: 247 GQQQVAQLPGLPPLAQK--MQLMPKVQEAQIQLHNQFSA 283
+Q+ L + L L QE I+L + ++
Sbjct: 188 SPEQINTLRAVKQLKDDDIQDLEKSKQEIMIKLKTEINS 226
>gi|92429673|gb|ABE77206.1| unknown [Sorghum bicolor]
Length = 240
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 47/182 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V+VGNIP+ A+E+++ + C +GPV S RL D TGK +GY F EY D+ETA SA R
Sbjct: 19 RVVYVGNIPFHASEKEVHDACELIGPVRSLRLAADPGTGKRRGYAFVEYPDDETARSACR 78
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G+ + GR+LRV A GR G ++ +G GE H+P
Sbjct: 79 NLHGHALRGRELRVGLA------------GRAG---------RRGVG---ARGE---HEP 111
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+GL A+ AA+++ G P D +T LA S +L EI+ +
Sbjct: 112 VGLEDAVHAASLVAG--------------------TPPPDSVTRFLAARSARELREIVGQ 151
Query: 187 MK 188
++
Sbjct: 152 LE 153
>gi|242037019|ref|XP_002465904.1| hypothetical protein SORBIDRAFT_01g047890 [Sorghum bicolor]
gi|241919758|gb|EER92902.1| hypothetical protein SORBIDRAFT_01g047890 [Sorghum bicolor]
Length = 240
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 47/182 (25%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V+VGNIP+ A+E+++ + C +GPV S RL D TGK +GY F EY D+ETA SA R
Sbjct: 19 RVVYVGNIPFHASEKEVRDACELIGPVRSLRLAADPGTGKRRGYAFVEYPDDETARSACR 78
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL G+ + GR+LRV A GR G ++ +G GE H+P
Sbjct: 79 NLHGHALRGRELRVGLA------------GRAG---------RRGVG---ARGE---HEP 111
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+GL A+ AA+++ G P D +T LA S +L EI+ +
Sbjct: 112 VGLEDAVHAASLVAG--------------------TPPPDSVTRFLAARSARELREIVGQ 151
Query: 187 MK 188
++
Sbjct: 152 LE 153
>gi|308490983|ref|XP_003107683.1| CRE-CPF-2 protein [Caenorhabditis remanei]
gi|308250552|gb|EFO94504.1| CRE-CPF-2 protein [Caenorhabditis remanei]
Length = 345
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 54/77 (70%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGNI YD TEE + I + G V+S ++V DRETGKPKGYGF E+ D TA +A R
Sbjct: 18 RSVFVGNISYDVTEETIRAIFAKAGHVMSIKMVHDRETGKPKGYGFIEFPDINTADTAIR 77
Query: 67 NLQGYEINGRQLRVDFA 83
L GYE+ GR LRVD A
Sbjct: 78 VLNGYELGGRVLRVDSA 94
>gi|365760727|gb|EHN02425.1| Rna15p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 313
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 18 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 77
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 78 NLNGYQLGSRFLKCGYSSN 96
>gi|58271580|ref|XP_572946.1| polyadenylation factor 64 kDa subunit [Cryptococcus neoformans
var. neoformans JEC21]
gi|57229205|gb|AAW45639.1| polyadenylation factor 64 kDa subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 455
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M + + VFV NIPYD +EEQL + E GPV + + D TG+ KGY F ++ DE T
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEAT 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAEND 86
ALSA RNLQ +NGR LRV+ + ++
Sbjct: 61 ALSAVRNLQDAPVNGRNLRVELSTDE 86
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 166 DPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
D ++ LA ++ Q+ ++M+ MK + N +QARQLL +P L ALFQA ++L + P
Sbjct: 203 DTISKTLAGIAPGQMGDVMTSMKSLIQTNPDQARQLLSQQPQLAYALFQAMLLLNLVDPS 262
Query: 226 VL 227
VL
Sbjct: 263 VL 264
>gi|134114518|ref|XP_774089.1| hypothetical protein CNBH0140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256721|gb|EAL19442.1| hypothetical protein CNBH0140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 455
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M + + VFV NIPYD +EEQL + E GPV + + D TG+ KGY F ++ DE T
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEAT 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAEND 86
ALSA RNLQ +NGR LRV+ + ++
Sbjct: 61 ALSAVRNLQDAPVNGRNLRVELSTDE 86
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 166 DPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
D ++ LA ++ Q+ ++M+ MK + N +QARQLL +P L ALFQA ++L + P
Sbjct: 203 DTISKTLAGIAPGQMGDVMTSMKSLIQTNPDQARQLLSQQPQLAYALFQAMLLLNLVDPS 262
Query: 226 VL 227
VL
Sbjct: 263 VL 264
>gi|401625777|gb|EJS43770.1| rna15p [Saccharomyces arboricola H-6]
Length = 314
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 18 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 77
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 78 NLNGYQLGSRFLKCGYSSN 96
>gi|151943247|gb|EDN61560.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407008|gb|EDV10275.1| mRNA 3'-end processing protein RNA15 [Saccharomyces cerevisiae
RM11-1a]
gi|259146458|emb|CAY79715.1| Rna15p [Saccharomyces cerevisiae EC1118]
Length = 295
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 18 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 77
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 78 NLNGYQLGSRFLKCGYSSN 96
>gi|6321394|ref|NP_011471.1| Rna15p [Saccharomyces cerevisiae S288c]
gi|133144|sp|P25299.1|RNA15_YEAST RecName: Full=mRNA 3'-end-processing protein RNA15
gi|172434|gb|AAA34984.1| RNA15 [Saccharomyces cerevisiae]
gi|1322531|emb|CAA96746.1| RNA15 [Saccharomyces cerevisiae]
gi|256271334|gb|EEU06400.1| Rna15p [Saccharomyces cerevisiae JAY291]
gi|285812156|tpg|DAA08056.1| TPA: Rna15p [Saccharomyces cerevisiae S288c]
gi|392299215|gb|EIW10309.1| Rna15p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 296
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 18 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 77
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 78 NLNGYQLGSRFLKCGYSSN 96
>gi|349578178|dbj|GAA23344.1| K7_Rna15p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 296
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 18 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 77
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 78 NLNGYQLGSRFLKCGYSSN 96
>gi|207345307|gb|EDZ72171.1| YGL044Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 306
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 29 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 88
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 89 NLNGYQLGSRFLKCGYSSN 107
>gi|254585481|ref|XP_002498308.1| ZYRO0G07216p [Zygosaccharomyces rouxii]
gi|238941202|emb|CAR29375.1| ZYRO0G07216p [Zygosaccharomyces rouxii]
Length = 271
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 56/77 (72%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV + +++ D +TGK KGY F EYKD E++ SA R
Sbjct: 13 RVVYLGSIPYDQTEEQILDLCSNVGPVNNLKMMFDPQTGKSKGYAFVEYKDLESSASAVR 72
Query: 67 NLQGYEINGRQLRVDFA 83
NL GY+ R L+ +A
Sbjct: 73 NLNGYQFGSRLLKCGYA 89
>gi|28279277|gb|AAH46091.1| Cstf2 protein [Danio rerio]
Length = 339
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK---DEETALS 63
R VFVGNIPY+ATEEQL +I EVG VVSFRLV DRETGKPKGYGFCEY+ +S
Sbjct: 24 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQPLPQPNVPVS 83
Query: 64 ARRNLQGYEING 75
+ + G +NG
Sbjct: 84 QPQPMPGLHVNG 95
>gi|255941180|ref|XP_002561359.1| Pc16g10490 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585982|emb|CAP93719.1| Pc16g10490 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 292
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 117/221 (52%), Gaps = 30/221 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSTAGTVTKFRLMMNPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +E+ GR++RVD+ N+ E+ P + Q P ++ + + Q
Sbjct: 68 NLNDHEVMGRKIRVDWPHNN-------EKDSVPPDYS-------QQSQPMMNQDPIQQQQ 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
I + L GV+ + Q+ PN ++ LA + NQL +++++
Sbjct: 114 IA----------GSAPLPPLPPGVE-----LPPQIDCPNA-ISHTLASLPPNQLLDVLTQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
MK +A + +A +LL P L A+FQA +++ + Q+L
Sbjct: 158 MKSLAVADPARAAELLRQAPQLAYAVFQALLLMNLVEYQLL 198
>gi|303312201|ref|XP_003066112.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105774|gb|EER23967.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 307
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 30/216 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYTLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI GR++RVD+ N++ + + G AA D G P G++ P
Sbjct: 68 NLNDYEIMGRKIRVDWPHNNEKDSVPLDYSQQGQASAAGQD-----GQPGYQGQA----P 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ L + G N L PN ++ L+ + QL +++S+
Sbjct: 119 L---------------LPSLPPGTDLPPN-----LTCPNA-ISQTLSTLPAPQLLDVLSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 158 MKSLVVADPARATELLRQAPQLAYAIFQALLLMNLV 193
>gi|397635556|gb|EJK71910.1| hypothetical protein THAOC_06607 [Thalassiosira oceanica]
Length = 293
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 56/75 (74%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF GN+ ++ TEEQL E+G VV R+V+D+ETGK +G+ F E++D + ALSA RN+
Sbjct: 161 VFCGNLAFNTTEEQLYNAFSEIGKVVKVRMVVDQETGKMRGFSFIEFEDPQAALSAIRNM 220
Query: 69 QGYEINGRQLRVDFA 83
YE+NGR+LRV+F+
Sbjct: 221 NDYEMNGRKLRVNFS 235
>gi|296813225|ref|XP_002846950.1| cleavage stimulation factor 64 kDa subunit [Arthroderma otae CBS
113480]
gi|238842206|gb|EEQ31868.1| cleavage stimulation factor 64 kDa subunit [Arthroderma otae CBS
113480]
Length = 299
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 30/216 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAIR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YE+ GR++RVD+ N++ + + Q Q G + G+ +
Sbjct: 68 NLNDYEVMGRKIRVDWPHNNEKDSVPPDYSQ-----------QSQPGMSSSAGQETQNSQ 116
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
L A+ A + L PN ++ L+ + QL +++S+
Sbjct: 117 APLLPALPPGA------------------DLPPNLTCPNA-ISQTLSSLPAPQLLDVLSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 158 MKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 193
>gi|348572429|ref|XP_003471995.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 tau variant-like [Cavia porcellus]
Length = 560
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
Query: 15 PYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEIN 74
PY+ TEEQ+ +I +V PVV F+LV DR G PKGYGFCEY+D++T SA NL G+E +
Sbjct: 24 PYEVTEEQVKDIFLDVTPVVGFQLVYDRGMGNPKGYGFCEYQDQQTVFSAMWNLNGHEFS 83
Query: 75 GRQLRVDFAENDKGADRNREQGRGGPGMAAIVD 107
GR L D ++ +++N+E+ + A I+D
Sbjct: 84 GRALLXD----NEASEKNKEELKSAGPAAPIID 112
>gi|296418788|ref|XP_002839007.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635001|emb|CAZ83198.1| unnamed protein product [Tuber melanosporum]
Length = 327
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 16 YDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEING 75
+ TE Q++EI VG V+ FRLV DRETG+ KGYGF E+ D ETA SA RNL YEI G
Sbjct: 17 HSLTETQVVEIFSAVGRVICFRLVFDRETGRSKGYGFAEFVDNETAASAVRNLDNYEILG 76
Query: 76 RQLRVDFAEN 85
R+LRVD++ +
Sbjct: 77 RKLRVDYSSH 86
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 484 VPVNQVPKVEEVQYSEKQIPQISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
P +Q P +E + Q P + ALLQQVL++ +Q+ LP +Q+QQ+IQL+Q L
Sbjct: 261 TPTHQAPIIEAIH--NLQDPNV------ALLQQVLNIPMDQIEVLPADQKQQMIQLRQRL 312
>gi|67624289|ref|XP_668427.1| cleavage stimulation factor [Cryptosporidium hominis TU502]
gi|54659631|gb|EAL38199.1| cleavage stimulation factor [Cryptosporidium hominis]
Length = 283
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 31 GPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGAD 90
GPV+S R+V D++TG +G+ FCEY+D ET + A ++L GYE+ GR +RVD+A D +
Sbjct: 5 GPVLSMRIVHDKDTGLSRGFSFCEYRDIETCIMAIKSLNGYELRGRSIRVDWASQDMRSR 64
Query: 91 RNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIAITAAAVMTGALGAAQV-G 149
N G A + + G G H PI L + +
Sbjct: 65 YNHLVVNNTSGAAPVTATTQGGIGMGQQGTEGLHHPISLTAPSHVQQIQEDGTSMPSIPN 124
Query: 150 VQSNQNGIQSQLASPNDPLTLHLAK-MSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPL 208
+N + I S++ + L + M+ +QL ++ M+ + QN E AR +LL P
Sbjct: 125 NNANFDNISSEI--------IQLVQGMTVSQLYYLIGHMQKLVVQNPETARSILLDNPQF 176
Query: 209 LKALFQAQIMLGMA 222
AL +Q +LGM
Sbjct: 177 CYALLHSQFILGMV 190
>gi|50419577|ref|XP_458315.1| DEHA2C14542p [Debaryomyces hansenii CBS767]
gi|49653981|emb|CAG86393.1| DEHA2C14542p [Debaryomyces hansenii CBS767]
Length = 235
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 49/227 (21%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
+ + V++GNIP+D TEEQ++EI + VGPV+ +L+ D TGK +GY F +Y D ETA SA
Sbjct: 3 ETKNVYIGNIPFDHTEEQVLEIAKSVGPVIDLKLLFDPMTGKSRGYAFIKYGDHETAASA 62
Query: 65 RRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHH 124
RNL I R ++ F+ ND A + G PA+
Sbjct: 63 VRNLNNMAIGNRNIKCSFS-NDNSAFPDSSNGNADK-------------LPAL------- 101
Query: 125 QPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIM 184
P+G+ + +NQ Q+ ++ L+ + + ++M
Sbjct: 102 -PLGIQLF-------------------NNQTIPQA--------ISNALSGLDQRSAYQLM 133
Query: 185 SEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPI 231
E K M+ N ++LL P L AL + ++L TP+++++ +
Sbjct: 134 KEAKQMSEDNPTLMKKLLDQFPQLAHALVETSLLLNFTTPEIVKLCV 180
>gi|363755552|ref|XP_003647991.1| hypothetical protein Ecym_7344 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892027|gb|AET41174.1| hypothetical protein Ecym_7344 [Eremothecium cymbalariae
DBVPG#7215]
Length = 269
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 41/237 (17%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TE+Q++++C VGPV +++ D +TGK KGY F E+KD T+ SA R
Sbjct: 11 RTVYLGSIPYDQTEQQILDLCSNVGPVTGLKMMFDPQTGKSKGYAFIEFKDLATSSSAVR 70
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGG---PGMAAIVDPQKQLGGPAIHGESVH 123
NL GY + R L+ + ++ RG PG + + Q++L P +
Sbjct: 71 NLNGYSLGNRTLKCGYTTGGGISEEYSLSNRGELIQPGGGSAISQQEELVYPNL------ 124
Query: 124 HQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEI 183
P G+ + I + +P ++ LAK+++++ +
Sbjct: 125 --PEGVDVNI--------------------------NMTTPAMIISSELAKLTKDEQFNL 156
Query: 184 MSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPIL--RQGPGH 238
+ +++ M+ ++E LL P L + A+++L Q+ ++ L QG G+
Sbjct: 157 LKKLQEMSRNDRESFVILLKQCPQL--SFVVAELLLTNGISQIDELTQLAVDQGNGN 211
>gi|320040100|gb|EFW22034.1| polyadenylation factor subunit CstF64 [Coccidioides posadasii str.
Silveira]
Length = 307
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 30/216 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYTLTEEQVKDILSSAGTVTKFRLMVNPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI GR++RVD+ N++ + + G AA D G P G++ P
Sbjct: 68 NLNDYEIMGRKIRVDWPHNNEKDSVPLDYSQQGQASAAGQD-----GQPGYQGQA----P 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ L + G N L PN ++ L+ + QL +++S+
Sbjct: 119 L---------------LPSLPPGTDLPPN-----LTCPNA-ISQTLSTLPAPQLLDVLSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 158 MKSLVVADPARATELLRQAPQLAYAIFQALLLMNLV 193
>gi|242765215|ref|XP_002340929.1| polyadenylation factor subunit CstF64, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724125|gb|EED23542.1| polyadenylation factor subunit CstF64, putative [Talaromyces
stipitatus ATCC 10500]
Length = 302
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA + VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D +
Sbjct: 1 MAPGMGKSVFLGNIPYNLTEEQVKDILSTAGTVTKFRLMMNPETGKPKGYGFADFADADA 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGE 120
A SA RNL YEI GR++RVD+ N++ P + +
Sbjct: 61 AASAVRNLNDYEIMGRKIRVDWPHNNEKD-----------------------SIPEDYSD 97
Query: 121 SVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQL 180
QP +L GV+ I L PN ++ L+++ NQL
Sbjct: 98 PYQPQPSQPQAQAQQQQQNPSSLPPLPPGVE-----IPPHLDCPN-AISQTLSQLPPNQL 151
Query: 181 NEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
+++S+MK +A + +A +LL P L A+FQA +++ +
Sbjct: 152 LDVLSQMKALAVADPARATELLRTAPQLAYAVFQALLLMNLV 193
>gi|45201105|ref|NP_986675.1| AGR010Cp [Ashbya gossypii ATCC 10895]
gi|44985888|gb|AAS54499.1| AGR010Cp [Ashbya gossypii ATCC 10895]
gi|374109926|gb|AEY98831.1| FAGR010Cp [Ashbya gossypii FDAG1]
Length = 266
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TE+Q++++C VGPV +++ D +TGK KGY F E+KD T+ SA R
Sbjct: 11 RTVYLGSIPYDQTEQQILDLCSNVGPVTGLKMMFDPQTGKSKGYAFIEFKDLATSSSAVR 70
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAI 117
NL GY + R L+ + ++ RG + PQ++L P +
Sbjct: 71 NLNGYALGNRTLKCGYTTGGGISEEYSLSNRGELSQVGGMGPQEELAYPNL 121
>gi|119193292|ref|XP_001247252.1| hypothetical protein CIMG_01023 [Coccidioides immitis RS]
gi|392863509|gb|EAS35737.2| polyadenylation factor subunit CstF64 [Coccidioides immitis RS]
Length = 307
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 30/216 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYTLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI GR++RVD+ N++ + + G AA D G P G++ P
Sbjct: 68 NLNDYEIMGRKIRVDWPHNNEKDSVPLDYSQQGQASAAGQD-----GQPGYQGQA----P 118
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ L + G N L PN ++ L+ + QL +++S+
Sbjct: 119 L---------------LPSLPPGTDLPPN-----LTCPNA-ISQTLSTLPAPQLLDVLSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 158 MKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 193
>gi|425773032|gb|EKV11407.1| Polyadenylation factor subunit CstF64, putative [Penicillium
digitatum PHI26]
gi|425782202|gb|EKV20125.1| Polyadenylation factor subunit CstF64, putative [Penicillium
digitatum Pd1]
Length = 292
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 30/221 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSTAGTVTKFRLMMNPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +E+ GR++RVD+ N+ E+ P + Q ++ + QP
Sbjct: 68 NLNDHEVMGRKIRVDWPHNN-------EKDSVPPDYS-------QQSQSLMNQDPTQQQP 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
I + L GV+ + Q+ PN ++ LA + NQL +++++
Sbjct: 114 IQ----------GSAPLPPLPPGVE-----LPPQIDCPNA-ISHTLASLPPNQLLDVLTQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
MK +A + +A LL P L A+FQA +++ + Q+L
Sbjct: 158 MKSLAVADPARATDLLRQAPQLAYAVFQALLLMNLVEYQLL 198
>gi|255713244|ref|XP_002552904.1| KLTH0D04158p [Lachancea thermotolerans]
gi|238934284|emb|CAR22466.1| KLTH0D04158p [Lachancea thermotolerans CBS 6340]
Length = 260
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV + +++ D +TGK KGY F EYK E + SA R
Sbjct: 13 RTVYLGSIPYDQTEEQILDLCSNVGPVANLKMMFDPQTGKSKGYAFIEYKSLEASASAVR 72
Query: 67 NLQGYEINGRQLRV 80
NL GY++ R L+
Sbjct: 73 NLNGYQLGNRLLKC 86
>gi|313231304|emb|CBY08419.1| unnamed protein product [Oikopleura dioica]
Length = 160
Score = 92.4 bits (228), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIP+ A EE L +I G VV FR+++DRETG+ +G GFCE+ DE + +A +L
Sbjct: 83 VFVGNIPWTAQEEDLKDIFSAHGQVVKFRILVDRETGRSRGMGFCEFADESSCQAAIDSL 142
Query: 69 QGYEINGRQLRVDFAEND 86
G++ NGRQLRVD A+ D
Sbjct: 143 NGHDYNGRQLRVDHAKRD 160
>gi|301598361|pdb|2KM8|B Chain B, Interdomain Rrm Packing Contributes To Rna Recognition
In The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 84
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 5 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 64
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 65 NLNGYQLGSRFLKCGYSSN 83
>gi|357117508|ref|XP_003560509.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Brachypodium distachyon]
Length = 222
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 54/225 (24%)
Query: 1 MASS-QHRC---VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK 56
MAS+ RC VFVGNIPY A EE+L E C E+GP+ S R+ D++TGKP+G+ F EY+
Sbjct: 1 MASAISCRCSSVVFVGNIPYQANEEELREACEEIGPLESLRVAFDKDTGKPRGFAFAEYR 60
Query: 57 DEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPA 116
D+ETA SA RNL G + GR LRV I Q+Q
Sbjct: 61 DDETARSACRNLHGRPLRGRALRV-----------------------GIQQRQRQ----- 92
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMS 176
HG +P+G+ A AA++ V G +A+P + +T +LA +S
Sbjct: 93 -HGTD---RPVGVEEATHAASL-----------VDYEHGG----MAAPGEAVTRYLAGLS 133
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGM 221
R Q+ E + + + E+A++ L++ QA+I++ M
Sbjct: 134 RRQVREFLGAVAGEREECVERAKREFRGLATLIE---QARILVDM 175
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 91.7 bits (226), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGN+ ++ TEEQL ++ ++G V+ RLV D +TGKP+G+ F E+ D + ALSA RN+
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM 60
Query: 69 QGYEINGRQLRVDFA 83
YE+NGR++RV+F+
Sbjct: 61 NDYELNGRRIRVNFS 75
>gi|223995751|ref|XP_002287549.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976665|gb|EED94992.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 76
Score = 90.5 bits (223), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 55/75 (73%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGN+ + TEEQL E+G +V R+V D +TGKP+G+ F E++D + ALSA RN+
Sbjct: 1 VFVGNLAFSTTEEQLYTAFSELGRIVKVRMVSDNDTGKPRGFAFIEFEDPQAALSAIRNM 60
Query: 69 QGYEINGRQLRVDFA 83
YEINGR++RV+F+
Sbjct: 61 NDYEINGRRIRVNFS 75
>gi|326471325|gb|EGD95334.1| polyadenylation factor subunit CstF64 [Trichophyton tonsurans CBS
112818]
gi|326479419|gb|EGE03429.1| polyadenylation factor subunit CstF64 [Trichophyton equinum CBS
127.97]
Length = 303
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 30/216 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAIR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YE+ GR++RVD+ N+ E+ P + Q Q G + G+
Sbjct: 68 NLNDYEVMGRKIRVDWPHNN-------EKDSVPPDYSQ----QAQPGASSSAGQDGQSSQ 116
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
L A+ A + L PN ++ L+ + QL +++S+
Sbjct: 117 APLLPALPPGA------------------DLPPNLTCPNA-ISQTLSSLPAPQLLDVLSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 158 MKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 193
>gi|294930685|ref|XP_002779653.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239889061|gb|EER11448.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 154
Score = 90.5 bits (223), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/66 (62%), Positives = 51/66 (77%)
Query: 21 EQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRV 80
E+L EI VGPV+SFRL+ D+ETG PKGYGFCEY+D ETA SA RNL + GR LRV
Sbjct: 39 EELREIFSRVGPVISFRLMKDKETGMPKGYGFCEYRDMETAYSAMRNLSNADYGGRPLRV 98
Query: 81 DFAEND 86
D+A+++
Sbjct: 99 DWADHE 104
>gi|285803163|pdb|2X1A|A Chain A, Structure Of Rna15 Rrm With Rna Bound (G)
gi|285803165|pdb|2X1B|A Chain A, Structure Of Rna15 Rrm
Length = 97
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 4 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 63
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 64 NLNGYQLGSRFLKCGYSSN 82
>gi|313224670|emb|CBY20461.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 89.7 bits (221), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIP+ ATE LI++ G VV FR++ DRETG+P+G GFCE+ DE + A L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 69 QGYEINGRQLRVDFAEND 86
G + NGR LRVD A+ +
Sbjct: 147 NGQDFNGRALRVDHAKRN 164
>gi|315050242|ref|XP_003174495.1| hypothetical protein MGYG_02023 [Arthroderma gypseum CBS 118893]
gi|311339810|gb|EFQ99012.1| hypothetical protein MGYG_02023 [Arthroderma gypseum CBS 118893]
Length = 304
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 111/217 (51%), Gaps = 32/217 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAIR 67
Query: 67 NLQGYEINGRQLRVDFAE-NDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQ 125
NL YE+ GR++RVD+ N+K + + PG+++ G G+S
Sbjct: 68 NLNDYEVMGRKIRVDWPHNNEKDSVPPDYSQQSQPGVSS---------GAGQDGQSSQ-- 116
Query: 126 PIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMS 185
A A+ GA + L PN ++ L+ + QL +++S
Sbjct: 117 ------APLLPALPPGA-------------DLPPNLTCPNA-ISQTLSSLPAPQLLDVLS 156
Query: 186 EMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
+MK + + +A +LL P L A+FQA +++ +
Sbjct: 157 QMKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 193
>gi|313240680|emb|CBY33001.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 89.4 bits (220), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNIP+ ATE LI++ G VV FR++ DRETG+P+G GFCE+ DE + A L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 69 QGYEINGRQLRVDFAEND 86
G + NGR LRVD A+ +
Sbjct: 147 NGQDFNGRALRVDHAKRN 164
>gi|285803166|pdb|2X1F|A Chain A, Structure Of Rna15 Rrm With Bound Rna (Gu)
Length = 96
Score = 89.4 bits (220), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TEEQ++++C VGPV++ +++ D +TG+ KGY F E++D E++ SA R
Sbjct: 3 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62
Query: 67 NLQGYEINGRQLRVDFAEN 85
NL GY++ R L+ ++ N
Sbjct: 63 NLNGYQLGSRFLKCGYSSN 81
>gi|221504703|gb|EEE30368.1| mRNA processing protein, putative [Toxoplasma gondii VEG]
Length = 615
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 24/234 (10%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GNIP+DATEE L + VG V+ R+ D E G+ KG+ FCE+ D ET A L
Sbjct: 18 MWLGNIPFDATEEDLKTLLSRVGRVLQVRIKYD-EGGQSKGFAFCEFPDPETCYLAYVTL 76
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIG 128
++ GR+L++DFA ++ R R G G AA + +K G G
Sbjct: 77 NNADLGGRKLKIDFATDEL---RQRYGSSG--GGAARAERRKAPAGSLAGASGAEEALRG 131
Query: 129 LHIAITAAAVMTG------------ALGAAQ-----VGVQSNQNGIQSQLASPNDPLTLH 171
L A + + G A+GA +G ++ + A+ D + +
Sbjct: 132 LGTAAGDSLLGPGPGAKAFRGRDTRAVGAVDPRAQGLGFRTRPVSLYDGAAAAADIMEI- 190
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
L S QL + EMK + ++ R+LL A P L+ A A +LG P+
Sbjct: 191 LRTFSTTQLISFLGEMKTLMKEDAGACRRLLSAHPALVYAALHAVYLLGSPRPE 244
>gi|221484507|gb|EEE22801.1| mRNA processing protein, putative [Toxoplasma gondii GT1]
Length = 615
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 24/234 (10%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GNIP+DATEE L + VG V+ R+ D E G+ KG+ FCE+ D ET A L
Sbjct: 18 MWLGNIPFDATEEDLKTLLSRVGRVLQVRIKYD-EGGQSKGFAFCEFPDPETCYLAYVTL 76
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIG 128
++ GR+L++DFA ++ R R G G AA + +K G G
Sbjct: 77 NNADLGGRKLKIDFATDEL---RQRYGSSG--GGAARAERRKAPAGSLAGASGAEEALRG 131
Query: 129 LHIAITAAAVMTG------------ALGAAQ-----VGVQSNQNGIQSQLASPNDPLTLH 171
L A + + G A+GA +G ++ + A+ D + +
Sbjct: 132 LGTAAGDSLLGPGPGAKAFRGRDTRAVGAVDPRAQGLGFRTRPVSLYDGAAAAADIMEI- 190
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
L S QL + EMK + ++ R+LL A P L+ A A +LG P+
Sbjct: 191 LRTFSTTQLISFLGEMKTLMKEDAGACRRLLSAHPALVYAALHAVYLLGSPRPE 244
>gi|327303098|ref|XP_003236241.1| polyadenylation factor subunit CstF64 [Trichophyton rubrum CBS
118892]
gi|326461583|gb|EGD87036.1| polyadenylation factor subunit CstF64 [Trichophyton rubrum CBS
118892]
Length = 303
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 30/216 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAIR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YE+ GR++RVD+ N+ E+ P + Q Q G + G+
Sbjct: 68 NLNDYEVMGRKIRVDWPHNN-------EKDSVPPDYSQ----QAQPGVSSSAGQDGQSSQ 116
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
L A+ A + L PN ++ L+ + QL +++S+
Sbjct: 117 APLLPALPPGA------------------DLPPNLTCPNA-ISQTLSSLPAPQLLDVLSQ 157
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 158 MKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 193
>gi|50310969|ref|XP_455507.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644643|emb|CAG98215.1| KLLA0F09383p [Kluyveromyces lactis]
Length = 258
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V++G+IPYD TE+Q++++C+ +GPV + +++ D TGK KGY F E+KD T+ SA R
Sbjct: 8 RTVYLGSIPYDQTEQQILDLCQTIGPVTAMKMMFDPTTGKSKGYAFIEFKDLATSASAVR 67
Query: 67 NLQGYEINGRQLRVDFA 83
NL GY + R L+ +
Sbjct: 68 NLNGYTLGSRSLKCGYT 84
>gi|156081724|ref|XP_001608355.1| mRNA processing protein [Plasmodium vivax Sal-1]
gi|148800926|gb|EDL42331.1| mRNA processing protein, putative [Plasmodium vivax]
Length = 721
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 56/83 (67%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MAS + +++GNIP+D TE +L EI +VG VVS R+ D + KG+ FCEYKD ET
Sbjct: 1 MASKSNYSLWIGNIPFDVTERELHEILSKVGQVVSVRIKYDVDKNISKGFAFCEYKDLET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
+ A + + GYE+ GR+LR+ +A
Sbjct: 61 CMLALKYINGYELKGRKLRLYWA 83
>gi|119480759|ref|XP_001260408.1| polyadenylation factor subunit CstF64, putative [Neosartorya
fischeri NRRL 181]
gi|119408562|gb|EAW18511.1| polyadenylation factor subunit CstF64, putative [Neosartorya
fischeri NRRL 181]
Length = 296
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 33/216 (15%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMMNPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +EI GR++RVD+ N+ E+ P + Q P QP
Sbjct: 68 NLNDFEIMGRKIRVDWPHNN-------EKDSVPPDYSQTSQMPSQDVQPG-------QQP 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ L GV+ + L PN ++ L+ + NQL +++S+
Sbjct: 114 -------------SAPLPPLPPGVE-----VPPHLDCPNA-ISQTLSSLPPNQLLDVLSQ 154
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK +A + +A +LL P L A+FQA +++ +
Sbjct: 155 MKSLAMTDPARATELLRQAPQLAYAIFQALLLMNLV 190
>gi|323454608|gb|EGB10478.1| hypothetical protein AURANDRAFT_23269, partial [Aureococcus
anophagefferens]
Length = 81
Score = 89.0 bits (219), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/77 (53%), Positives = 53/77 (68%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNI + T+E + I EVG V+ R+ ++ ETGKP+GY F EY D TALSA RNL
Sbjct: 5 VFVGNIAFGTTDEDIRRIFSEVGRVLGVRMAVNAETGKPRGYCFVEYDDAATALSAIRNL 64
Query: 69 QGYEINGRQLRVDFAEN 85
++ GRQLRV+F+ N
Sbjct: 65 NNRDVGGRQLRVNFSNN 81
>gi|121698868|ref|XP_001267833.1| polyadenylation factor subunit CstF64, putative [Aspergillus
clavatus NRRL 1]
gi|119395975|gb|EAW06407.1| polyadenylation factor subunit CstF64, putative [Aspergillus
clavatus NRRL 1]
Length = 296
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 33/216 (15%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMMNPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI GR++RVD+ N E+ P D + P G+
Sbjct: 68 NLNDYEIMGRKIRVDWPH-------NNEKDSVPP------DYSQTSQMPVQDGQG----- 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
G +A + + L PN ++ L+ + NQL +++S+
Sbjct: 110 --------------GQQSSAPLPPLPPGVDVPPHLDCPNA-ISQTLSSLPPNQLLDVLSQ 154
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 155 MKSLVMTDPARATELLRQAPQLAYAIFQALLLMNLV 190
>gi|237839651|ref|XP_002369123.1| mRNA processing protein, putative [Toxoplasma gondii ME49]
gi|211966787|gb|EEB01983.1| mRNA processing protein, putative [Toxoplasma gondii ME49]
Length = 615
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 26/235 (11%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GNIP+DATEE L + VG V+ R+ D E G+ KG+ FCE+ D ET A L
Sbjct: 18 MWLGNIPFDATEEDLKTLLSRVGRVLQVRIKYD-EGGQSKGFAFCEFPDPETCYLAYVTL 76
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPI- 127
++ GR+L++DFA ++ R R G G AA + +K G ++ G S + +
Sbjct: 77 NNADLGGRKLKIDFATDEL---RQRYGSSG--GGAARAERRKAPAG-SLAGTSGAEEALR 130
Query: 128 GLHIAITAAAVMTG------------ALGAAQ-----VGVQSNQNGIQSQLASPNDPLTL 170
GL A + + G A+GA +G ++ + A+ D + +
Sbjct: 131 GLGTAAGDSLLGPGPGAKAFRGRDTRAVGAVDPRAQGLGFRTRPVSLYDGAAAAADIMEI 190
Query: 171 HLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
L S QL + EMK + ++ R+LL A P L+ A A +LG P+
Sbjct: 191 -LRTFSTTQLISFLGEMKTLMKEDAGACRRLLSAHPALVYAALHAVYLLGSPRPE 244
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ +DATE+QL E+ + G V S R+ DRE+G+PKG+G+ E++D E+A A
Sbjct: 410 VLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEG 469
Query: 68 LQGYEINGRQLRVDFAE 84
L G EI GR +R+DF++
Sbjct: 470 LAGQEIAGRAVRLDFSQ 486
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S+ + +FVG + ++ + L E G VVS R+ +DR TGK +G+GF + E A+
Sbjct: 305 SASTKTIFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPE-AV 363
Query: 63 SARRNLQGYEINGRQLRVD 81
L G EI+GR + +D
Sbjct: 364 DKALELNGKEIDGRPINID 382
>gi|225563146|gb|EEH11425.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325093102|gb|EGC46412.1| polyadenylation factor subunit CstF64 [Ajellomyces capsulatus H88]
Length = 300
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 109/221 (49%), Gaps = 31/221 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YEI GR++RVD+ N E+ P Q Q+G + G Q
Sbjct: 68 NLNDYEIMGRKIRVDWPH-------NNEKDSVPPDYPQ----QPQMG--IMQGMQGQDQ- 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
AL G + N L PN ++ LA + QL +++++
Sbjct: 114 -----------SQASALPPLPPGTELPPN-----LTCPNA-ISQTLASLPAPQLLDVITQ 156
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
MK + + +A +LL P L A+FQA +++ + VL
Sbjct: 157 MKSLVMADPARATELLRQAPHLAYAIFQALLLMNLVDYSVL 197
>gi|238493633|ref|XP_002378053.1| polyadenylation factor subunit CstF64, putative [Aspergillus flavus
NRRL3357]
gi|220696547|gb|EED52889.1| polyadenylation factor subunit CstF64, putative [Aspergillus flavus
NRRL3357]
gi|391869478|gb|EIT78676.1| mRNA cleavage and polyadenylation factor I complex, subunit RNA15
[Aspergillus oryzae 3.042]
Length = 282
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 32/216 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 9 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMMNPETGKPKGYGFADFADADAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YE+ GR++RVD+ N+ E+ P D + P G+
Sbjct: 69 NLNDYEVMGRKIRVDWPHNN-------EKDSIPP------DYSQTTQVPGQDGQ------ 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
M +A + + L PN ++ L+ + NQL +++S+
Sbjct: 110 ------------MGAQQSSAPLPPLPPGVDLPPHLDCPN-AISQTLSSLPPNQLLDVLSQ 156
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 157 MKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 192
>gi|221054940|ref|XP_002258609.1| mrna processing protein [Plasmodium knowlesi strain H]
gi|193808678|emb|CAQ39381.1| mrna processing protein, putative [Plasmodium knowlesi strain H]
Length = 820
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MAS + +++GNIP+D TE +L ++ VG VVS R+ D E KG+ FCEYKD ET
Sbjct: 1 MASKSNYSLWIGNIPFDVTERELDDVLSRVGEVVSVRIKYDIEKNISKGFAFCEYKDLET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
+ A + + GYE+ GR+LR+ +A
Sbjct: 61 CMLALKYINGYELKGRKLRLYWA 83
>gi|169783810|ref|XP_001826367.1| polyadenylation factor subunit CstF64 [Aspergillus oryzae RIB40]
gi|83775111|dbj|BAE65234.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 282
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 32/216 (14%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 9 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMMNPETGKPKGYGFADFADADAAASAVR 68
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL YE+ GR++RVD+ N+ E+ P D + P G+
Sbjct: 69 NLNDYEVMGRKIRVDWPHNN-------EKDSIPP------DYSQTTQVPGQDGQ------ 109
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
M +A + + L PN ++ L+ + NQL +++S+
Sbjct: 110 ------------MGAQQSSAPLPPLPPGVDLPPHLDCPN-AISQTLSSLPPNQLLDVLSQ 156
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK + + +A +LL P L A+FQA +++ +
Sbjct: 157 MKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 192
>gi|388497732|gb|AFK36932.1| unknown [Lotus japonicus]
Length = 165
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 95/172 (55%), Gaps = 34/172 (19%)
Query: 382 DAGFQPGPSTSAGIGQTVSRDAERSARVPEDGTRAHRNNAYTNMSMGLASKRSTVNDPLD 441
D FQPGPSTS+ +AY+N + K + V D +
Sbjct: 26 DTSFQPGPSTSS--------------------------SAYSNTGV---EKTNMVQDFSE 56
Query: 442 SISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQAFGAGLVPVNQVPKVEEVQYSEKQ 501
S +HPSK ++++ G S G ++ IGS S G+ +P K E V+Y E Q
Sbjct: 57 SFTHPSKFMRSDKGRIPSLPAGIKDLPVTIGS--SHVLGSSSLPAPTASKAE-VRYPEPQ 113
Query: 502 I--PQISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQMQPS 551
PQ+ PDVES LLQQVL+LTPEQL+SLPPEQ+QQVIQLQ++ +D MQPS
Sbjct: 114 SSQPQLPPDVESVLLQQVLNLTPEQLSSLPPEQQQQVIQLQKSFRQDHMQPS 165
>gi|149244434|ref|XP_001526760.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449154|gb|EDK43410.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 254
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 103/235 (43%), Gaps = 51/235 (21%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++ CV +G P D TEEQ++EI R VGPV+ +L+ D TGK KGY Y D ETA S
Sbjct: 3 NKSTCVSIGKFPLDYTEEQILEIARSVGPVLDVKLLFDEMTGKSKGYAIINYGDVETAGS 62
Query: 64 ARRNLQGYEI-NGRQLRV------DFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPA 116
A RNL + NGR L+ +F D D N G AAI P P
Sbjct: 63 AVRNLNYMTLPNGRFLKCSMANESEFVNGDGDGDAN--GTTSGTTAAAIKLP------PL 114
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMS 176
P+G+ I NQN Q ++L L+ +
Sbjct: 115 ---------PLGIQI-------------------HPNQNASQ--------VISLLLSNID 138
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQVLQMPI 231
N +I+ E+K M+ +N + A+ LL P L AL + +M ++++M +
Sbjct: 139 SNSAMQILKEIKTMSIENPKAAQLLLERFPQLALALVELGLMSNTTNQELIEMTL 193
>gi|71001126|ref|XP_755244.1| polyadenylation factor subunit CstF64 [Aspergillus fumigatus Af293]
gi|66852882|gb|EAL93206.1| polyadenylation factor subunit CstF64, putative [Aspergillus
fumigatus Af293]
gi|159129328|gb|EDP54442.1| polyadenylation factor subunit CstF64, putative [Aspergillus
fumigatus A1163]
Length = 296
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 33/216 (15%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMMNPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQP 126
NL +EI GR++RVD+ N E+ P + Q+ + QP
Sbjct: 68 NLNDFEIMGRKIRVDWP-------HNNEKDSVPPDYSQT----SQMPSQDVQA---GQQP 113
Query: 127 IGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSE 186
+ L GV+ + L PN ++ L+ + NQL +++S+
Sbjct: 114 -------------SAPLPPLPPGVE-----VPPHLDCPNA-ISQTLSSLPPNQLLDVLSQ 154
Query: 187 MKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
MK +A + +A +LL P L A+FQA +++ +
Sbjct: 155 MKSLAMTDPARATELLRQAPQLAYAIFQALLLMNLV 190
>gi|258574541|ref|XP_002541452.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901718|gb|EEP76119.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 306
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D ++A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADSAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL YEI GR++RVD+ N++
Sbjct: 68 NLNDYEIMGRKIRVDWPHNNE 88
>gi|212528890|ref|XP_002144602.1| polyadenylation factor subunit CstF64, putative [Talaromyces
marneffei ATCC 18224]
gi|210074000|gb|EEA28087.1| polyadenylation factor subunit CstF64, putative [Talaromyces
marneffei ATCC 18224]
Length = 290
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA + VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D +
Sbjct: 1 MAPGMGKSVFLGNIPYNLTEEQVKDILSTAGTVTKFRLMMNPETGKPKGYGFADFADADA 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDK 87
A SA RNL YEI GR++RVD+ N++
Sbjct: 61 AASAVRNLNDYEIMGRKIRVDWPHNNE 87
>gi|170588491|ref|XP_001899007.1| RNA binding protein, identical [Brugia malayi]
gi|170588493|ref|XP_001899008.1| RNA binding protein, identical [Brugia malayi]
gi|1813684|gb|AAC47624.1| putative RNA binding protein [Brugia malayi]
gi|158593220|gb|EDP31815.1| RNA binding protein, identical [Brugia malayi]
gi|158593221|gb|EDP31816.1| RNA binding protein, identical [Brugia malayi]
gi|208429687|gb|ACI26725.1| putative RNA binding protein [Wuchereria bancrofti]
gi|402582983|gb|EJW76928.1| RNA-binding protein [Wuchereria bancrofti]
Length = 82
Score = 86.7 bits (213), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R VFVGN+PY A EE + +VGPV S R+V+DR+TG+P+G+GFCE++ E A A
Sbjct: 3 RSVFVGNLPYSAREEDVANFFWQVGPVTSVRIVLDRDTGRPRGFGFCEFETEAAAEQAVG 62
Query: 67 NLQGYEINGRQLRVDFA 83
++ E GRQLRVD A
Sbjct: 63 SMNHAEFMGRQLRVDRA 79
>gi|52076765|dbj|BAD45709.1| hypothetical protein [Oryza sativa Japonica Group]
gi|52076787|dbj|BAD45731.1| hypothetical protein [Oryza sativa Japonica Group]
gi|52076962|dbj|BAD45972.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125596715|gb|EAZ36495.1| hypothetical protein OsJ_20826 [Oryza sativa Japonica Group]
Length = 214
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 1 MASSQHRC---VFVGNIPYDATEEQLIEICREVGPVVSFRLV-IDRETGKPKGYGFCEYK 56
MA RC V+VGNI + ATE +L + C +GPV S RL +D T K KGY F EY
Sbjct: 1 MADVNCRCSRVVYVGNIAFHATEAELRDACELIGPVRSLRLAALDPATNKRKGYAFVEYA 60
Query: 57 DEETALSARRNLQGYEINGRQLRVDFA 83
D+ETA SA RNL G+ + GR+LRV A
Sbjct: 61 DDETARSALRNLHGHLLRGRELRVGLA 87
>gi|429964943|gb|ELA46940.1| hypothetical protein VCUG_01559 [Vavraia culicis 'floridensis']
Length = 202
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNI +D EE+LIE +G VVSFR+V D +T K KGYGFCEY+++E A A + L
Sbjct: 7 VFVGNIDFDVPEEKLIEQLGTIGRVVSFRMVYDHKTKKSKGYGFCEYENKEIAQLAVKTL 66
Query: 69 QGYEINGRQLRVDFAEND 86
N RQ+++++AEND
Sbjct: 67 N-ISFNNRQVKINYAEND 83
>gi|326431687|gb|EGD77257.1| hypothetical protein PTSG_08350 [Salpingoeca sp. ATCC 50818]
Length = 397
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V+VGNIPY+ATEE+LI+ VG V +F L+ D+ TG+ KG+GFC + D A SA RN
Sbjct: 6 SVWVGNIPYEATEEELIKFFSAVGDVKNFHLITDQNTGRSKGFGFCYFLDAAAAESAVRN 65
Query: 68 LQGYEINGRQLRVDFA 83
L G + R LRVD A
Sbjct: 66 LSGQPLRDRPLRVDLA 81
>gi|261195098|ref|XP_002623953.1| polyadenylation factor subunit CstF64 [Ajellomyces dermatitidis
SLH14081]
gi|239587825|gb|EEQ70468.1| polyadenylation factor subunit CstF64 [Ajellomyces dermatitidis
SLH14081]
gi|239610687|gb|EEQ87674.1| polyadenylation factor subunit CstF64 [Ajellomyces dermatitidis
ER-3]
gi|327348876|gb|EGE77733.1| polyadenylation factor subunit CstF64 [Ajellomyces dermatitidis
ATCC 18188]
Length = 306
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL YEI GR++RVD+ N++
Sbjct: 68 NLNDYEIMGRKIRVDWPHNNE 88
>gi|70952960|ref|XP_745612.1| mRNA processing protein [Plasmodium chabaudi chabaudi]
gi|56525991|emb|CAH82321.1| mRNA processing protein, putative [Plasmodium chabaudi chabaudi]
Length = 694
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+S + +++GNIP+D +E++L EI VG VVS R+ D + KG+ FCEYKD ET
Sbjct: 1 MSSKSNCSLWIGNIPFDLSEKELQEILSRVGEVVSVRIKYDIDKNVSKGFAFCEYKDLET 60
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQ 95
+ A + L GYEI GR+L++ +A D +RE+
Sbjct: 61 CMLALKYLNGYEIRGRKLKLYWAN-----DESREK 90
>gi|324564529|gb|ADY49874.1| Cleavage stimulation factor subunit 2 tau variant, partial
[Ascaris suum]
Length = 82
Score = 86.3 bits (212), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FVGN+PY A EE + + +VG VV+ R+V DRETG+P+G+GFCE++ E+ A A
Sbjct: 3 RSIFVGNLPYSAREEDIADFFGQVGSVVNVRIVFDRETGRPRGFGFCEFETEDAAERAVG 62
Query: 67 NLQGYEINGRQLRVDFAEN 85
++ + GRQ+RVD A +
Sbjct: 63 SMNNADFMGRQIRVDRANS 81
>gi|260949207|ref|XP_002618900.1| hypothetical protein CLUG_00059 [Clavispora lusitaniae ATCC
42720]
gi|238846472|gb|EEQ35936.1| hypothetical protein CLUG_00059 [Clavispora lusitaniae ATCC
42720]
Length = 238
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 49/88 (55%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S V +G+IP+D TEEQ+ EI R VGPV +L+ D TG+ KG F Y D ETAL
Sbjct: 2 SDNDSTVHIGSIPFDYTEEQVAEIARSVGPVSDLKLMFDPNTGRSKGSAFVRYADRETAL 61
Query: 63 SARRNLQGYEINGRQLRVDFAENDKGAD 90
SA RNL + R LR FA D
Sbjct: 62 SAVRNLNNMNVGNRYLRCSFASESDAYD 89
>gi|324532508|gb|ADY49239.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 115
Score = 86.3 bits (212), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGNIPY+ +E + + GPVV+ RLV DR+TG+PKG+GFC++ DE +A A L
Sbjct: 39 VYVGNIPYNCSEMDVGNFFSQAGPVVNVRLVYDRDTGRPKGFGFCDFADEISAQGAINTL 98
Query: 69 QGYEINGRQLRVDFA 83
G + NGR LRV++A
Sbjct: 99 NGADFNGRALRVNWA 113
>gi|225681022|gb|EEH19306.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
Length = 306
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL YEI GR++RVD+ N++
Sbjct: 68 NLNDYEIMGRKIRVDWPHNNE 88
>gi|269859935|ref|XP_002649691.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|269863259|ref|XP_002651156.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220065037|gb|EED42901.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220066886|gb|EED44356.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 241
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+GNI +D EE +++ VG V SFRL+ D+ TGK KGYGFCEY+ E A A + L
Sbjct: 37 VFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETPEVADMALKKL 96
Query: 69 QGYEINGRQLRVDFAEND 86
+ NGRQ ++++AEND
Sbjct: 97 K-ISFNGRQAKINYAEND 113
>gi|226292284|gb|EEH47704.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb18]
Length = 306
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL YEI GR++RVD+ N++
Sbjct: 68 NLNDYEIMGRKIRVDWPHNNE 88
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus
cantonensis]
Length = 97
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
+AS V+VGNIPY TE+ + + G V + R+V DRETG+PKG+GFCE+ DE
Sbjct: 12 VASPTRYSVYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAG 71
Query: 61 ALSARRNLQGYEINGRQLRVDFAEND 86
A +A L G + NGR LRV++A +
Sbjct: 72 AQNAVNTLNGTDFNGRSLRVNWANKN 97
>gi|402467760|gb|EJW03010.1| hypothetical protein EDEG_02592 [Edhazardia aedis USNM 41457]
Length = 213
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGNI +D TE++LIE +G VV+F+++ID++TG+ KGYGFCEY ET L A +
Sbjct: 7 VYVGNIDFDITEQELIEKLSSIGRVVNFKMMIDKQTGRSKGYGFCEY---ETPLIAETAV 63
Query: 69 QGYEI--NGRQLRVDFAENDKGADR 91
Q ++ N RQL++++A+ D + R
Sbjct: 64 QKLKVVLNNRQLKINYADVDMSSSR 88
>gi|440492608|gb|ELQ75160.1| mRNA cleavage and polyadenylation factor I complex, subunit RNA15
[Trachipleistophora hominis]
Length = 202
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNI +D EE+LIE +G VVSFR+V D +T K KGYGFCEY+ +E A A ++L
Sbjct: 7 VFVGNIDFDVPEEKLIEQLGTIGRVVSFRMVYDHKTKKSKGYGFCEYETKEIAQLAVKSL 66
Query: 69 QGYEINGRQLRVDFAEND 86
N RQ+++++AEND
Sbjct: 67 N-ISFNNRQVKINYAEND 83
>gi|125554762|gb|EAZ00368.1| hypothetical protein OsI_22384 [Oryza sativa Indica Group]
Length = 213
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 60/225 (26%)
Query: 1 MASSQHRC---VFVGNIPYDATEEQLIEICREVGPVVSFRLVI-DRETGKPKGYGFCEYK 56
MA RC V+VGNI + A+E +L + C +GPV S RL D T K KGY F EY
Sbjct: 1 MADVNCRCSRVVYVGNIAFHASEAELRDACELIGPVRSLRLAAADPATSKRKGYAFVEYA 60
Query: 57 DEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPA 116
D+ETA SA RNL G+ + GR+LRV G+AA +++ G A
Sbjct: 61 DDETARSALRNLHGHLLRGRELRV--------------------GLAARPSTRRRGVGDA 100
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMS 176
+P+G+ A+ AA+++ P +T +LA S
Sbjct: 101 ------EREPVGMEDAVHAASLVVS--------------------GRPLASVTRYLAARS 134
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGM 221
R ++ E+++ A + EQ L P L A+ QAQ +L M
Sbjct: 135 RQEVREMVA-----ALEATEQ-----LKIPGLGTAMEQAQRLLEM 169
>gi|444318183|ref|XP_004179749.1| hypothetical protein TBLA_0C04320 [Tetrapisispora blattae CBS
6284]
gi|387512790|emb|CCH60230.1| hypothetical protein TBLA_0C04320 [Tetrapisispora blattae CBS
6284]
Length = 269
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++ + V++G+IPYD TEEQ++++C+ +GPV + R++ D TGK KGY F E+KD ++ S
Sbjct: 2 NRSKTVYLGSIPYDQTEEQILDLCQNIGPVQNLRMMFDPMTGKSKGYAFVEFKDLNSSAS 61
Query: 64 ARRNLQGYEINGRQLRVDFA 83
A RNL G R L+ ++
Sbjct: 62 AVRNLNGLSFGSRVLKCGYS 81
>gi|124507199|ref|XP_001352196.1| mRNA processing protein, putative [Plasmodium falciparum 3D7]
gi|23505226|emb|CAD52006.1| mRNA processing protein, putative [Plasmodium falciparum 3D7]
Length = 761
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GNIP+D TE +L EI +VG V + R+ D + KG+ FCEYKD ET L A + +
Sbjct: 10 LWIGNIPFDITENELYEILCKVGVVRNVRIKYDVDKNMSKGFAFCEYKDVETCLLAFKYI 69
Query: 69 QGYEINGRQLRVDFAENDKGADR 91
GYEI GR+L+V F N++ D+
Sbjct: 70 NGYEIKGRKLKV-FWANEEYKDK 91
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS +FVGN+ +D TE+Q+ E+ E G V S RL DRETG+PKG+G+ E+ D ETA
Sbjct: 392 ASEPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETA 451
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
A L G E+ GR +R+D+++
Sbjct: 452 KKAFEGLSGTEVAGRPIRLDYSQ 474
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FVG + ++ + L + E G V+S R+ +DR TGK +G+G+ E+ E A+ A
Sbjct: 297 KSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTE-AVEAAL 355
Query: 67 NLQGYEINGRQLRVDFAE-NDKGADRNR 93
L G EI+GR + +D +E DKGA R +
Sbjct: 356 LLNGKEIDGRPVNIDKSEQKDKGAAREK 383
>gi|385303887|gb|EIF47934.1| cleavage and polyadenylation factor i (cf i) component [Dekkera
bruxellensis AWRI1499]
Length = 228
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +++ +IPYD TEEQ+++I + VGPVVS +L+ DRETGK +G EY D ETA SA R
Sbjct: 3 KVIYITSIPYDKTEEQVLDIAKSVGPVVSSKLLFDRETGKSRGVCLVEYPDYETASSAVR 62
Query: 67 NLQGYEING----------RQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPA 116
NL + ++G R L+ +FA + +++ + GG
Sbjct: 63 NLNNFPVSGGDGSKGGMMRRYLKCNFASEST--------------IIRLLNGEGWNGGRG 108
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMS 176
GE+ L I + + G+ + I LA+ N+P
Sbjct: 109 YGGENSGDSRYELEREIPPLPAGVNVMDXSMDGLNA---AIYQALANINEP--------- 156
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
++ ++ + K+M+ N E LL P L+ AL Q ++L +A+P
Sbjct: 157 --RMKNLVRDAKVMSDDNPELMEVLLETHPQLIYALVQXAMLLNLASP 202
>gi|83314770|ref|XP_730505.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490246|gb|EAA22070.1| synthetic antigen of P.falciparum, putative [Plasmodium yoelii
yoelii]
Length = 617
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 3 SSQHRC-VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
S+++ C +++GNIP+D +E +L EI VG VV+ R+ D + KG+ FCEYKD ET
Sbjct: 2 SNKNNCSLWIGNIPFDLSENELHEILSRVGEVVNVRIKYDIDKNVSKGFAFCEYKDIETC 61
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
+ A + L GYEI GR+L++ +A
Sbjct: 62 MLALKYLNGYEIRGRKLKLYWA 83
>gi|259479741|tpe|CBF70239.1| TPA: polyadenylation factor subunit CstF64, putative
(AFU_orthologue; AFUA_2G09100) [Aspergillus nidulans
FGSC A4]
Length = 293
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VF+GNIPY+ TEEQ+ +I G V FRL+++ ETGKPKGYGF ++ D + A SA R
Sbjct: 8 KSVFLGNIPYNLTEEQVKDILSTAGTVTKFRLMMNPETGKPKGYGFADFADADAAASAVR 67
Query: 67 NLQGYEINGRQLRVDFAENDK 87
NL YEI GR++RVD+ N++
Sbjct: 68 NLNDYEIMGRKIRVDWPHNNE 88
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
SQ V+VGN P+ TEEQ+ + VG V + R+V DRETG+P+G+ F E+ DE A
Sbjct: 2 SQGFSVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQR 61
Query: 64 ARRNLQGYEINGRQLRVDFAEN 85
A + L G + NGRQLRV+ A N
Sbjct: 62 AVQELNGADFNGRQLRVNLANN 83
>gi|302509588|ref|XP_003016754.1| hypothetical protein ARB_05046 [Arthroderma benhamiae CBS 112371]
gi|291180324|gb|EFE36109.1| hypothetical protein ARB_05046 [Arthroderma benhamiae CBS 112371]
Length = 311
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 40/226 (17%)
Query: 7 RCVFVGNIPY----------DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK 56
+ VF+GNIPY D TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++
Sbjct: 8 KSVFLGNIPYTSRADGFDILDLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFA 67
Query: 57 DEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPA 116
D + A SA RNL YE+ GR++RVD+ N+ E+ P + Q Q G +
Sbjct: 68 DADAAASAIRNLNDYEVMGRKIRVDWPHNN-------EKDSVPPDYSQ----QAQPGVSS 116
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMS 176
G+ L A+ A + L PN ++ L+ +
Sbjct: 117 SAGQDGQSSQAPLLPALPPGA------------------DLPPNLTCPNA-ISQTLSSLP 157
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
QL +++S+MK + + +A +LL P L A+FQA +++ +
Sbjct: 158 APQLLDVLSQMKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 203
>gi|302665553|ref|XP_003024386.1| hypothetical protein TRV_01453 [Trichophyton verrucosum HKI 0517]
gi|291188438|gb|EFE43775.1| hypothetical protein TRV_01453 [Trichophyton verrucosum HKI 0517]
Length = 313
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 40/226 (17%)
Query: 7 RCVFVGNIPY----------DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK 56
+ VF+GNIPY D TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++
Sbjct: 8 KSVFLGNIPYTSRADGFDILDLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFA 67
Query: 57 DEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPA 116
D + A SA RNL YE+ GR++RVD+ N+ E+ P + Q Q G +
Sbjct: 68 DADAAASAIRNLNDYEVMGRKIRVDWPHNN-------EKDSVPPDYSQ----QAQPGVSS 116
Query: 117 IHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMS 176
G+ L A+ A + L PN ++ L+ +
Sbjct: 117 SAGQDGQSSQAPLLPALPPGA------------------DLPPNLTCPNA-ISQTLSSLP 157
Query: 177 RNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
QL +++S+MK + + +A +LL P L A+FQA +++ +
Sbjct: 158 APQLLDVLSQMKSLVMADPARATELLRQAPQLAYAIFQALLLMNLV 203
>gi|295673274|ref|XP_002797183.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282555|gb|EEH38121.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 309
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 7 RCVFVGNIPY---DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
+ VF+GNIPY D TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A S
Sbjct: 8 KSVFLGNIPYSFSDLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAAS 67
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A RNL YEI GR++RVD+ N++
Sbjct: 68 AVRNLNDYEIMGRKIRVDWPHNNE 91
>gi|67539808|ref|XP_663678.1| hypothetical protein AN6074.2 [Aspergillus nidulans FGSC A4]
gi|40738859|gb|EAA58049.1| hypothetical protein AN6074.2 [Aspergillus nidulans FGSC A4]
Length = 303
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 106/228 (46%), Gaps = 46/228 (20%)
Query: 7 RCVFVGNIPY----------DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK 56
+ VF+GNIPY D TEEQ+ +I G V FRL+++ ETGKPKGYGF ++
Sbjct: 8 KSVFLGNIPYRSLLADTLCLDLTEEQVKDILSTAGTVTKFRLMMNPETGKPKGYGFADFA 67
Query: 57 DEETALSARRNLQGYEINGRQLRVDFAENDK--GADRNREQGRGGPGMAAIVDPQKQLGG 114
D + A SA RNL YEI GR++RVD+ N++ + Q PG QLGG
Sbjct: 68 DADAAASAVRNLNDYEIMGRKIRVDWPHNNEKDSVPEDYSQPSQMPGQDG------QLGG 121
Query: 115 PAIHGESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAK 174
P + + L PN ++ LA
Sbjct: 122 PPLSAPLPPL---------------------------PPGVELPPHLDCPN-AISQTLAA 153
Query: 175 MSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
+ NQL +++ +MK +A + +A +LL P L A+FQA ++L +
Sbjct: 154 LPPNQLLDVLQQMKALAMSDPARATELLRQAPQLAYAIFQALLLLNLV 201
>gi|189192110|ref|XP_001932394.1| copper methylamine oxidase precursor [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187974000|gb|EDU41499.1| copper methylamine oxidase precursor [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1053
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 111/213 (52%), Gaps = 35/213 (16%)
Query: 18 ATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQ 77
TEE +IE VG V +FRLV D+ETG+PKG+GF E+ D + A SA RNL Y++ GR+
Sbjct: 764 GTEELIIETLGRVGQVNNFRLVYDKETGRPKGFGFAEFADADAAASAVRNLNDYDLMGRK 823
Query: 78 LRVDFAENDKGADR---NREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIGLHIAIT 134
LRVD++ D NR+QG PA++G+ A
Sbjct: 824 LRVDWSNESGSGDNAPSNRDQG----------------APPAMNGQQ----------AAP 857
Query: 135 AAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLMATQN 194
AAA + ALG GV+ N L P D ++ L+ + +QL +I+S+MK + +
Sbjct: 858 AAAQPSSALGPLPPGVELPPN-----LTCP-DAISRTLSTLPPDQLLDILSQMKGLVMTD 911
Query: 195 KEQARQLLLAKPPLLKALFQAQIMLGMATPQVL 227
+A +LL P L A+FQ+ ++L + P +L
Sbjct: 912 PAKATELLRQAPQLAYAIFQSLLLLQLVDPAIL 944
>gi|241948243|ref|XP_002416844.1| cleavage and polyadenylation factor I (CF I) component, putative
[Candida dubliniensis CD36]
gi|223640182|emb|CAX44431.1| cleavage and polyadenylation factor I (CF I) component, putative
[Candida dubliniensis CD36]
Length = 240
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ CV +G P+D TEEQ+ +I R VGPV+ +L+ D TGK KGY Y D ETA S
Sbjct: 3 SKSTCVSIGKFPFDYTEEQVRDIARSVGPVLDVKLLFDELTGKSKGYAIINYGDNETASS 62
Query: 64 ARRNLQGYEI-NGRQLRVDFAEN 85
A RNL + NGR L+ F +
Sbjct: 63 AVRNLNYMTLPNGRFLKCSFVTD 85
>gi|269865317|ref|XP_002651881.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220063702|gb|EED42174.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 170
Score = 82.0 bits (201), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+GNI +D EE +++ VG V SFRL+ D+ TGK KGYGFCEY+ E A A + L
Sbjct: 11 VFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETPEVADMALKKL 70
Query: 69 QGYEINGRQLRVDFAEND 86
+ NGRQ ++++AEND
Sbjct: 71 K-ISFNGRQAKINYAEND 87
>gi|269862977|ref|XP_002651049.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220065210|gb|EED43006.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 171
Score = 82.0 bits (201), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+GNI +D EE +++ VG V SFRL+ D+ TGK KGYGFCEY+ E A A + L
Sbjct: 11 VFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETPEVADMALKKL 70
Query: 69 QGYEINGRQLRVDFAEND 86
+ NGRQ ++++AEND
Sbjct: 71 K-ISFNGRQAKINYAEND 87
>gi|330842867|ref|XP_003293390.1| hypothetical protein DICPUDRAFT_50943 [Dictyostelium purpureum]
gi|325076280|gb|EGC30079.1| hypothetical protein DICPUDRAFT_50943 [Dictyostelium purpureum]
Length = 66
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 47/61 (77%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVGNIPY+A E+ LI+I G VVSFRL+ D+E K +GYGFCEY++ E+ALSA R
Sbjct: 3 KSVFVGNIPYEANEQDLIDIFSGAGKVVSFRLLEDKEKNKLRGYGFCEYENAESALSAIR 62
Query: 67 N 67
N
Sbjct: 63 N 63
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
++Q V+VGN+PY TEE + VG V + R+V DRETG+P+G+ F EY DE A
Sbjct: 2 AAQGFSVYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRGFAFVEYTDESGAQ 61
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A + L G NGR LRV+FA
Sbjct: 62 RAVQELNGTSFNGRNLRVNFA 82
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGNI +DAT++ + E+ +E G + + RL DRETG PKG+G+ E+ E A SA N
Sbjct: 362 TLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMEN 421
Query: 68 LQGYEINGRQLRVDFA 83
L G +I GR +R+D++
Sbjct: 422 LTGVDIAGRPIRLDYS 437
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ EE L E G + + R++ DR++G+ KGYG+ E++ + A A
Sbjct: 255 LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEAR 314
Query: 69 QGYEINGRQLRVDF 82
GY ++ R+LRVD
Sbjct: 315 HGYTLDNRELRVDL 328
>gi|303390190|ref|XP_003073326.1| cleavage stimulation factor [Encephalitozoon intestinalis ATCC
50506]
gi|303302472|gb|ADM11966.1| cleavage stimulation factor [Encephalitozoon intestinalis ATCC
50506]
Length = 214
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNI ++ EE++IE VG VVSFR+V D+ TGK +G+GFCEY E+ L + L
Sbjct: 7 IFVGNIDFEVPEERIIEELGAVGKVVSFRMVYDKTTGKSRGFGFCEY---ESPLIVEKAL 63
Query: 69 QGYEI--NGRQLRVDFAEND 86
Q +I NGR +++++AEND
Sbjct: 64 QNLKISFNGRPVKINYAEND 83
>gi|68486329|ref|XP_712963.1| hypothetical protein CaO19.4538 [Candida albicans SC5314]
gi|68486520|ref|XP_712869.1| hypothetical protein CaO19.12013 [Candida albicans SC5314]
gi|46434286|gb|EAK93700.1| hypothetical protein CaO19.12013 [Candida albicans SC5314]
gi|46434387|gb|EAK93798.1| hypothetical protein CaO19.4538 [Candida albicans SC5314]
gi|238879331|gb|EEQ42969.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 276
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ CV +G P+D TEEQ+ +I R VGPV+ +L+ D TGK KGY Y D ETA S
Sbjct: 39 SKSTCVSIGKFPFDYTEEQVRDIARSVGPVLDVKLLFDELTGKSKGYAIINYGDNETASS 98
Query: 64 ARRNLQGYEI-NGRQLRVDFAEN 85
A RNL + NGR L+ F +
Sbjct: 99 AVRNLNYMTLPNGRFLKCSFVTD 121
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS +FVGN+ +DATE+ L E E G + S R+ DRETGKPKG+ + E+ D E +
Sbjct: 139 ASEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEAS 198
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
A G E+ GR +RVDF++
Sbjct: 199 KKAFEGAAGAEVAGRNIRVDFSQ 221
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVG + ++ + L + E G VVS R+ +DR TGK +G+G+ + E A
Sbjct: 39 ASDATKTIFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVE-A 97
Query: 62 LSARRNLQGYEINGRQLRVDFA-ENDKGADRNR 93
+ A G EI+GR + +D + E DKGA R +
Sbjct: 98 VDAAIAQNGKEIDGRAVNIDKSIEKDKGAVRQK 130
>gi|150864537|ref|XP_001383390.2| hypothetical protein PICST_44112 [Scheffersomyces stipitis CBS
6054]
gi|149385793|gb|ABN65361.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 234
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S V +G P+D TEEQ++EI R VGPV+ +L+ D TGK KGY + D ETA S
Sbjct: 3 STSTTVSIGKFPFDYTEEQVLEIARSVGPVLDLKLLFDELTGKSKGYAIINFGDNETAAS 62
Query: 64 ARRNLQGYEI-NGRQLRVDFAENDKGADRNR 93
A RNL + NGR LR F + +++ R
Sbjct: 63 AVRNLNYMTLPNGRFLRCTFINDYDISNQER 93
>gi|19173364|ref|NP_597167.1| CLEAVAGE STIMULATION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|19170953|emb|CAD26343.1| CLEAVAGE STIMULATION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|449328858|gb|AGE95134.1| cleavage stimulation factor [Encephalitozoon cuniculi]
Length = 214
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNI ++ EE++IE VG VVSFR+V D+ TGK +G+GFCEY E+ L + L
Sbjct: 7 IFVGNIDFEVPEERIIEELGAVGKVVSFRMVYDKTTGKSRGFGFCEY---ESPLIVEKAL 63
Query: 69 QGYEI--NGRQLRVDFAEND 86
Q +I NGR +++++AEND
Sbjct: 64 QNLKISFNGRPVKINYAEND 83
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S++ + +FVGN+ ++A E+ L E E G +VS RL DRETG+ KG+G+ E+ E A
Sbjct: 486 SAESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAK 545
Query: 63 SARRNLQGYEINGRQLRVDFAE 84
SA L G +I GR +R+DF++
Sbjct: 546 SAFNALNGKDIAGRNIRLDFSQ 567
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 3 SSQHRC-VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
+S C +FVG + ++ +E L G VV + +DR+TG+ KG+G+ + E A
Sbjct: 386 NSDANCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAA 445
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A + G EI+GR + V+ A
Sbjct: 446 EKAIAEMNGKEIDGRAVNVNAA 467
>gi|308504932|ref|XP_003114649.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
gi|308258831|gb|EFP02784.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
Length = 150
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+SQ V+VGN+PY TEE++ VG V + R+V DRETG+P+G+ F EY +E A
Sbjct: 68 ASQGFSVYVGNVPYQGTEEEIGNYFSTVGIVNNVRIVYDRETGRPRGFAFVEYSEEAGAQ 127
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A L G NGR LRV++A
Sbjct: 128 RAVEELNGAAFNGRNLRVNYA 148
>gi|261329508|emb|CBH12490.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 340
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGK-PKGYGFCEYKDEETALSAR 65
R + V IP TEE L E+ R GP+VS R++ DRE G PKGYGF YK E+A++A
Sbjct: 8 RNLIVNYIPTPVTEEDLEELFRPFGPLVSVRIICDRENGNHPKGYGFVRYKFVESAMNAM 67
Query: 66 RNLQGYEINGRQLRVDFAENDK------GADRNREQG-RGGPGMAAIVDPQKQLGGPAIH 118
+ GY IN ++LRV A + G+ R+ G R PG A ++ GP
Sbjct: 68 SRMNGYSINNKRLRVTQATGPRKYSQAAGSTSVRQPGPRAPPGSAP-----PKVSGPCFG 122
Query: 119 GESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLH---LAKM 175
+V I++T ++++ + V ++N + + +A P + H A +
Sbjct: 123 DGAVE------QISLTTSSLVPCPI----VHPFDSRNSVLTAMARPQETTVHHPATFALV 172
Query: 176 SRNQLNEIMSEMKLMA 191
R +++ I + +MA
Sbjct: 173 DRGRMHMIQAAPGIMA 188
>gi|72391404|ref|XP_845996.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175909|gb|AAX70033.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70802532|gb|AAZ12437.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 340
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGK-PKGYGFCEYKDEETALSAR 65
R + V IP TEE L E+ R GP+VS R++ DRE G PKGYGF YK E+A++A
Sbjct: 8 RNLIVNYIPTPVTEEDLEELFRPFGPLVSVRIICDRENGNHPKGYGFVRYKFVESAMNAM 67
Query: 66 RNLQGYEINGRQLRVDFAENDK------GADRNREQG-RGGPGMAAIVDPQKQLGGPAIH 118
+ GY IN ++LRV A + G+ R+ G R PG A ++ GP
Sbjct: 68 SRMNGYSINNKRLRVTQATGPRKYSQAAGSTSVRQPGPRAPPGSAP-----PKVSGPCFG 122
Query: 119 GESVHHQPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDPLTLH---LAKM 175
+V I++T ++++ + V ++N + + +A P + H A +
Sbjct: 123 DGAVE------QISLTTSSLVPCPI----VHPFDSRNSVLTAMARPQETTVHHPATFALV 172
Query: 176 SRNQLNEIMSEMKLMA 191
R +++ I + +MA
Sbjct: 173 DRGRMHMIQAAPGIMA 188
>gi|354543921|emb|CCE40643.1| hypothetical protein CPAR2_106780 [Candida parapsilosis]
Length = 243
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
CV +G P+D TEEQ++EI R VGPV+ +L+ D TGK KGY Y D ETA SA RN
Sbjct: 7 CVSIGKFPFDYTEEQVLEIARSVGPVLDIKLLFDELTGKSKGYAIVNYGDVETAGSAVRN 66
Query: 68 LQGYEI-NGRQLRV 80
L + NGR L+
Sbjct: 67 LNYTSLPNGRFLKC 80
>gi|401827248|ref|XP_003887716.1| RNA binding protein [Encephalitozoon hellem ATCC 50504]
gi|392998723|gb|AFM98735.1| RNA binding protein [Encephalitozoon hellem ATCC 50504]
Length = 214
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNI ++ EE++IE VG VVSFR+V D+ TGK +G+GFCEY E+ L + L
Sbjct: 7 IFVGNIDFEVPEERIIEELGAVGRVVSFRMVYDKTTGKSRGFGFCEY---ESPLIVEKAL 63
Query: 69 QGYEI--NGRQLRVDFAEND 86
Q +I NGR +++++AEND
Sbjct: 64 QNLKISFNGRPVKINYAEND 83
>gi|396081838|gb|AFN83452.1| cleavage stimulation factor [Encephalitozoon romaleae SJ-2008]
Length = 214
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNI ++ EE++IE VG VVSFR+V D+ TGK +G+GFCEY E+ L + L
Sbjct: 7 IFVGNIDFEVPEERIIEELGAVGRVVSFRMVYDKTTGKSRGFGFCEY---ESPLIVEKAL 63
Query: 69 QGYEI--NGRQLRVDFAEND 86
Q +I NGR +++++AEND
Sbjct: 64 QNLKISFNGRPVKINYAEND 83
>gi|344304669|gb|EGW34901.1| hypothetical protein SPAPADRAFT_58025 [Spathaspora passalidarum
NRRL Y-27907]
Length = 236
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ V +G P+D TEEQ++EI + VGPV+ +L+ D TGK KGY Y D ETA S
Sbjct: 3 SKSTSVSIGKFPFDYTEEQVLEIAKSVGPVLDVKLLFDDLTGKSKGYAIINYADNETAAS 62
Query: 64 ARRNLQGYEI-NGRQLRVDF 82
A RNL + NGR L+ F
Sbjct: 63 AVRNLNYMTLPNGRFLKCSF 82
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 52/83 (62%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S Q V+VGN P+ +EE++ VG V + R+V DRETG+P+G+ F E+ DE A
Sbjct: 2 SGQGFSVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQ 61
Query: 63 SARRNLQGYEINGRQLRVDFAEN 85
A + L G E NGRQLRV+ A N
Sbjct: 62 KAVQELNGAEFNGRQLRVNLANN 84
>gi|68066518|ref|XP_675235.1| mRNA processing protein [Plasmodium berghei strain ANKA]
gi|56494302|emb|CAH94523.1| mRNA processing protein, putative [Plasmodium berghei]
Length = 153
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 3 SSQHRC-VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
S+++ C +++GNIP+D +E++L EI +VG VV+ R+ D + KG+ FCEYKD ET
Sbjct: 2 SNKNNCSLWIGNIPFDLSEKELQEILSKVGEVVNVRIKYDIDKNVSKGFAFCEYKDLETC 61
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRN 92
+ A + L GYEI GR+L++ +A ++ N
Sbjct: 62 MLALKYLNGYEIRGRKLKLYWATDESKEKAN 92
>gi|448518331|ref|XP_003867942.1| Rna15 protein [Candida orthopsilosis Co 90-125]
gi|380352281|emb|CCG22506.1| Rna15 protein [Candida orthopsilosis]
Length = 243
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
CV +G P+D TEEQ++EI R VGPV+ +L+ D TGK KGY Y D ETA SA RN
Sbjct: 7 CVSIGKFPFDYTEEQVLEIARSVGPVLDIKLLFDELTGKSKGYAIVNYGDVETAGSAVRN 66
Query: 68 LQGYEI-NGRQLR 79
L + NGR L+
Sbjct: 67 LNYTSLPNGRFLK 79
>gi|412992184|emb|CCO19897.1| cleavage stimulation factor subunit 2 [Bathycoccus prasinos]
Length = 350
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 32/235 (13%)
Query: 9 VFVGNIPYDATEEQLIEI-CREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V + N+P+D+TE L + E+G VV ++ D +TGKP + CE+ D A SA RN
Sbjct: 18 VLIQNLPHDSTERSLQSLFSDEIGDVVDLQIPSDTKTGKPFPFAACEFTDRALAESAVRN 77
Query: 68 LQGYEINGRQLRVDFAEN-DKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESV---- 122
+ G E +++R+ E+ + G D GG G+ D + L G + V
Sbjct: 78 VNGREYKEKKVRIRLLEHAEFGRDGCPLTTTGGQGLQG--DLLEGLEGGVLRVTVVTESE 135
Query: 123 -------------HH--QPIGLHIAITAAAVMTGALGAAQVGVQSNQNGIQSQLASPNDP 167
+H PIGL +A A+++M A G +Q ++ G + D
Sbjct: 136 KRRRELQQLDLNSYHPSVPIGLTVAKVASSLMAPAGGFSQ---PTDGKG------AAMDL 186
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA 222
L+ + ++ Q+ +++ E+K MA + R LL A P L A FQ Q+ LGM
Sbjct: 187 LSKRIGDLTPTQMFDVVRELKEMAEGDPVGTRNLLSANPQLCLAAFQCQLALGMV 241
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ + ATE+ L E E G V S R+ DRETG PKG+ + E+ D ETA SA +
Sbjct: 416 LFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAKSAYEGV 475
Query: 69 QGYEINGRQLRVDFAE 84
G EI GR +R+D+++
Sbjct: 476 SGKEIAGRAVRLDYSQ 491
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S ++ +FVG + ++ E L + + G VVS R+ +DR TGK +G+ + + A
Sbjct: 310 SGANKSIFVGRLSWNVDNEWLAQEFADCGEVVSARVQMDRNTGKSRGFAYVTFA-TAEAA 368
Query: 63 SARRNLQGYEINGRQLRVD 81
A L G EI+GR + +D
Sbjct: 369 QAALQLTGKEIDGRPVNID 387
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ +DATE+ + E E G V S RL DRE+G+PKG+G+ E+ D + A +A
Sbjct: 445 VLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAFEA 504
Query: 68 LQGYEINGRQLRVDFAE 84
L G EI GR +R+D+++
Sbjct: 505 LSGTEIGGRSIRLDYSQ 521
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
+ + +FVG + ++ ++QL E G VVS R+ IDR TGK +G+G E+ D + A
Sbjct: 341 ESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADASSVQKA 400
Query: 65 RRNLQGYEINGRQLRVDFA 83
+ G EI+GR + VD A
Sbjct: 401 IDTMNGKEIDGRPVNVDRA 419
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/77 (46%), Positives = 53/77 (68%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN P+ +TE+++ + + G V + R+V DRETG+P+G+ F EY DE++A A L
Sbjct: 7 VYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVNEL 66
Query: 69 QGYEINGRQLRVDFAEN 85
G + NGRQLRV+ A N
Sbjct: 67 NGADFNGRQLRVNLANN 83
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 79.3 bits (194), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ + +EE L+E+ +E G V S +++ DR+TG+ KG+GF E +E A S NL
Sbjct: 3 LFIGNLNFKTSEEDLMELLKEYGEVKSLQIIKDRDTGRSKGFGFVEMATKEQAESVMENL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
G E +G+ L+VD+A+ + E GRGG
Sbjct: 63 NGAEFDGKVLKVDYAKEKE------ESGRGG 87
>gi|312069857|ref|XP_003137877.1| hypothetical protein LOAG_02291 [Loa loa]
gi|307766959|gb|EFO26193.1| hypothetical protein LOAG_02291 [Loa loa]
Length = 231
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
GN+PY A EE + +VGPV S R+V+DR+TG+P+G+GFCE++ E A A ++
Sbjct: 156 FGNLPYSAREEDVANFFWQVGPVTSVRIVLDRDTGRPRGFGFCEFETEAAAEQAVGSMNH 215
Query: 71 YEINGRQLRVD 81
E GRQLRVD
Sbjct: 216 AEFMGRQLRVD 226
>gi|255730737|ref|XP_002550293.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132250|gb|EER31808.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 237
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S CV +G P+D TEEQ+ +I VGPV+ +L+ D TGK KGY Y D ETA S
Sbjct: 3 STSTCVSIGKFPFDYTEEQVRDIASSVGPVLDVKLLFDELTGKSKGYAIINYGDNETAAS 62
Query: 64 ARRNLQGYEI-NGRQLRVDF 82
A RNL + NGR L+ F
Sbjct: 63 AVRNLNYMTLPNGRFLKCSF 82
>gi|281205895|gb|EFA80084.1| hypothetical protein PPL_06906 [Polysphondylium pallidum PN500]
Length = 85
Score = 79.0 bits (193), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+P+D EE+++EI E G VV FR V D+ TG+ KGYGFCEY + + AL A L
Sbjct: 5 IFIGNLPFDTLEEEIVEILSEAGNVVWFRTVFDKMTGRSKGYGFCEYNNHDQALIAANTL 64
Query: 69 QGYEINGRQLRVDFAE 84
R +R+ ++
Sbjct: 65 NNRIYKARAIRISLSD 80
>gi|116789989|gb|ABK25463.1| unknown [Picea sitchensis]
Length = 516
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 13/175 (7%)
Query: 145 AAQVGVQSNQNGIQSQLASPNDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLA 204
A Q+ QSN +G S A+ N T H+A MS+ QL ++MS+MKL+ QN++QARQ+L+A
Sbjct: 19 AGQINGQSNPSG-NSANAAGNRSFTSHIAGMSKPQLYDLMSQMKLLIEQNEQQARQILVA 77
Query: 205 KPPLLKALFQAQIMLGMATPQVLQMPILRQGPGHPAQPLFQDGQQQVAQLPGLPPLAQKM 264
P + K LFQAQIMLGM P + MP ++Q P QP+ Q Q+ P + +
Sbjct: 78 NPAMTKTLFQAQIMLGMLRPPQV-MPNIQQSLSQPPQPVQVGHQGQIQPRPQGQMNSVQS 136
Query: 265 QLMPK-VQEAQIQLHNQF---------SAATQPTLHPQIQLPQNAKNQALQQASL 309
Q+ P+ + Q+ H Q S A QP++ + +PQ + QA+QQ+ +
Sbjct: 137 QIQPRQTTQMQVGQHGQMPMIPQSQPQSTAMQPSIQRPLPIPQ-PQMQAVQQSQV 190
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 502 IPQISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQALLRDQM 548
+ +SPD E LLQQV+SLTPEQ++ LP E RQQV QLQQ Q+
Sbjct: 469 VSHLSPDQEKVLLQQVMSLTPEQISCLPEEHRQQVFQLQQMFRGSQV 515
>gi|313233602|emb|CBY09773.1| unnamed protein product [Oikopleura dioica]
Length = 320
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R V+VGNI D E++ E+ EVG VVSF++V D+E K YGF EYKD A SA +
Sbjct: 28 RTVYVGNISPDTVYERIKEVLNEVGTVVSFKMVFDKELHILKTYGFAEYKDIGDAQSAVK 87
Query: 67 NLQGYEINGRQLRVD 81
NL E++ R LRVD
Sbjct: 88 NLNSRELDKRNLRVD 102
>gi|402578296|gb|EJW72251.1| hypothetical protein WUBG_16842, partial [Wuchereria bancrofti]
Length = 75
Score = 79.0 bits (193), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 12 GNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGY 71
GN+PY A EE + +VGPV S R+V+DR+TG+P+G+GFCE++ E A A ++
Sbjct: 1 GNLPYSAREEDVANFFWQVGPVTSVRIVLDRDTGRPRGFGFCEFETEAAAEQAVGSMNHA 60
Query: 72 EINGRQLRVDFA 83
E GRQLRVD A
Sbjct: 61 EFMGRQLRVDRA 72
>gi|341882525|gb|EGT38460.1| hypothetical protein CAEBREN_15135 [Caenorhabditis brenneri]
Length = 84
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+SQ V+VGN PY +E+++ VG V + R+V DRETG+P+G+ F E+ DE A
Sbjct: 2 ASQGFSVYVGNAPYQTSEDEIGSFFSNVGHVTNVRIVCDRETGRPRGFAFVEFADEAGAQ 61
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A L G + NGRQLRV+ A
Sbjct: 62 RAVNELNGADFNGRQLRVNLA 82
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ + AT++ + E+ VG VV+ RL DR++G+PKG+G+ E+ D ETA A
Sbjct: 373 TLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKALNE 432
Query: 68 LQGYEINGRQLRVDFA 83
L G + GR +R+DF+
Sbjct: 433 LGGTDFEGRNIRLDFS 448
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FVG + ++ +E L E G VVS R+ +DR+TGK KG+G+ E+ D +A A
Sbjct: 272 KSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVE 331
Query: 67 NLQGYEINGRQLRVDFA 83
+ G EI+GR + +D A
Sbjct: 332 TMNGREIDGRPVNLDLA 348
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ +DATEEQL E+ + G + S + R++G+PKG+G+ E++D E+A A +L
Sbjct: 141 LFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESAKKAHESL 200
Query: 69 QGYEINGRQLRVDFAE 84
G EI GR +R++F++
Sbjct: 201 VGQEIAGRAIRLEFSQ 216
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FVG + ++ L + G +VS + DR TG+ +G+GF + E A+
Sbjct: 39 KTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPE-AVDKAL 97
Query: 67 NLQGYEINGRQLRVD 81
L G EI+GR + VD
Sbjct: 98 ELNGKEIDGRSINVD 112
>gi|47156973|gb|AAT12351.1| cleavage stimulation factor [Antonospora locustae]
Length = 214
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNI ++ EE+++E VG VVSFR++ DR TGK KGYGF EY E+ L A +
Sbjct: 7 VFVGNIDFEVPEEKIVEELSAVGKVVSFRMMYDRATGKSKGYGFAEY---ESPLIAETAV 63
Query: 69 QGYEI--NGRQLRVDFAEND 86
Q I NGR +++++AE+D
Sbjct: 64 QTLRISFNGRLVKINYAESD 83
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ + ++ L E E G V + RL DRE+G+PKG+G+ E+ D ETA A
Sbjct: 434 TLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAA 493
Query: 68 LQGYEINGRQLRVDFAE 84
+QG E++GR +R+DF++
Sbjct: 494 MQGVELDGRSVRLDFSQ 510
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FVG + ++ + L + E G VVS + +DR TG+ +G+G+ + E A+
Sbjct: 333 KSIFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSE-AVEKAI 391
Query: 67 NLQGYEINGRQLRVD 81
L G EI+GR + VD
Sbjct: 392 ELNGKEIDGRAVNVD 406
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
++Q V+VGN+PY +EE++ + VG V + R+V DRETG+P+G+ F E+ DE A
Sbjct: 2 AAQGFSVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQ 61
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A L G NGR LRV++A
Sbjct: 62 RAVEQLNGASFNGRNLRVNYA 82
>gi|405122493|gb|AFR97260.1| polyadenylation factor 64 kDa subunit [Cryptococcus neoformans var.
grubii H99]
Length = 479
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 17 DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGR 76
D +EEQL + E GPV + + D TG+ KGY F ++ DE TALSA RNLQ +NGR
Sbjct: 35 DVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEATALSAVRNLQDAPVNGR 94
Query: 77 QLRVDFAEND 86
LRV+ + ++
Sbjct: 95 NLRVELSTDE 104
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 166 DPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATPQ 225
D ++ LA ++ Q+ ++M+ MK + N +QARQLL +P L ALFQA ++L + P
Sbjct: 221 DTISKTLAGIAPGQMGDVMTSMKSLIQTNPDQARQLLSQQPQLAYALFQAMLLLNLVDPS 280
Query: 226 VL 227
VL
Sbjct: 281 VL 282
>gi|154308771|ref|XP_001553721.1| hypothetical protein BC1G_07808 [Botryotinia fuckeliana B05.10]
gi|347831781|emb|CCD47478.1| hypothetical protein [Botryotinia fuckeliana]
Length = 381
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+C+F+GN+ ++ ++ L + REV V+ R+ IDR TG+P+G+ ++ D ++A+ A
Sbjct: 254 KCLFIGNLAFEMSDADLNSLFREVRNVIDVRVAIDRRTGQPRGFAHADFVDVDSAMKALE 313
Query: 67 NLQGYEINGRQLRVDFAENDK---GADRNREQGRG 98
LQG E+ R+LRVD++ ++ G DRN ++G G
Sbjct: 314 QLQGKEVFNRRLRVDYSLGERSAGGRDRN-DRGFG 347
>gi|17508567|ref|NP_493029.1| Protein R06C1.4 [Caenorhabditis elegans]
gi|3878851|emb|CAB03222.1| Protein R06C1.4 [Caenorhabditis elegans]
Length = 84
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+SQ V+VGN+PY TEE++ VG V + R+V DRETG+P+G+ F E+ +E A
Sbjct: 2 ASQGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQ 61
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A L G NGR LRV++A
Sbjct: 62 RAVEQLNGVAFNGRNLRVNYA 82
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 76.6 bits (187), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 52/75 (69%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN PY TE+++ + VG V + R+V+DRETG+P+G+ F E+ ++++A A L
Sbjct: 8 IYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNEL 67
Query: 69 QGYEINGRQLRVDFA 83
G + NGRQLRV+ A
Sbjct: 68 NGADFNGRQLRVNIA 82
>gi|156050581|ref|XP_001591252.1| hypothetical protein SS1G_07878 [Sclerotinia sclerotiorum 1980]
gi|154692278|gb|EDN92016.1| hypothetical protein SS1G_07878 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 376
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+C+F+GN+ ++ ++ L + REV V+ R+ IDR TG+P+G+ ++ D ++A+ A
Sbjct: 235 KCLFIGNLAFEMSDADLNSLFREVRNVIDVRVAIDRRTGQPRGFAHADFVDVDSAMKALE 294
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGM 102
LQG E+ R+LRVD++ +K N GRG G
Sbjct: 295 QLQGKEVFNRRLRVDYSVGEK----NASSGRGERGF 326
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GN+ +D TEE L + G + R+ D G KG+ + ++ D ++A +A
Sbjct: 148 IYIGNLLFDITEEDLKKEFEHFGTITDVRVTRD-ARGLSKGFAYIDFADVQSATAAIEEK 206
Query: 69 QGYEINGRQLRVDF 82
GR+L V++
Sbjct: 207 NQTIFEGRRLIVNY 220
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVG + ++ EE L+ E G + S R++ DRETGK KG+GF E+K + A+ A
Sbjct: 2 TLFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEG 61
Query: 68 LQGYEINGRQLRVDFAE 84
QG EI+GR +R+DF E
Sbjct: 62 KQGGEIDGRNVRLDFTE 78
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ +DA E+ + E+ E G + + RL DR+TG KG+G+ E + A A
Sbjct: 109 TLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDDAKVAFEA 168
Query: 68 LQGYEINGRQLRVDFA 83
LQG EI GR +R+D++
Sbjct: 169 LQGAEIAGRSIRLDYS 184
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 76.3 bits (186), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN Y TE++L + VG V + R+V DRETG+P+G+ F E+ DE A A L
Sbjct: 8 VYVGNATYQTTEQELGDYFSTVGQVTNVRIVCDRETGRPRGFAFVEFADEAGAQRACDQL 67
Query: 69 QGYEINGRQLRVDFA 83
G + NGRQLRV+ A
Sbjct: 68 NGVDFNGRQLRVNLA 82
>gi|401404624|ref|XP_003881768.1| putative mRNA processing protein [Neospora caninum Liverpool]
gi|325116181|emb|CBZ51735.1| putative mRNA processing protein [Neospora caninum Liverpool]
Length = 720
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GNIP+DATEE L + VG V+ R+ D E G+ KG+ FCE+ D ET A L
Sbjct: 18 MWLGNIPFDATEEDLKTLLSRVGRVLQVRIKYD-EGGQSKGFAFCEFPDPETCYLAYVTL 76
Query: 69 QGYEINGRQLRVDFAEND 86
++ GR+L++DFA ++
Sbjct: 77 NNVDLGGRKLKIDFATDE 94
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ +D TE+ L E+ E G V S RL DR+T + KGYG+ E+ D E+A A
Sbjct: 421 VLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEG 480
Query: 68 LQGYEINGRQLRVDFAE 84
+G ++ GR +R+D+A+
Sbjct: 481 ARGMDVGGRTIRLDYAQ 497
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ VFVG + ++ + L + + G VVS R+ +DR TGK +G+GF E+ E A +A
Sbjct: 321 KTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEGA-NAAV 379
Query: 67 NLQG-YEINGRQLRVD 81
L G EI+GR + +D
Sbjct: 380 ALNGQKEIDGRAVNLD 395
>gi|115469732|ref|NP_001058465.1| Os06g0698400 [Oryza sativa Japonica Group]
gi|113596505|dbj|BAF20379.1| Os06g0698400 [Oryza sativa Japonica Group]
gi|125556626|gb|EAZ02232.1| hypothetical protein OsI_24329 [Oryza sativa Indica Group]
gi|125598375|gb|EAZ38155.1| hypothetical protein OsJ_22507 [Oryza sativa Japonica Group]
gi|215766192|dbj|BAG98420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 99
Score = 75.5 bits (184), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 1 MASSQHRC---VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETG-KPKGYGFCEYK 56
MA+ RC VFVGN+ Y ATE +L + C E+GPV S RL +D + G + +G+ F EY
Sbjct: 1 MAAVSCRCSSVVFVGNVSYRATEAELRDACEEIGPVESLRLAVDEDAGNRRRGFAFVEYL 60
Query: 57 DEETALSARRNLQGYEINGRQLRVDFAE 84
D+ETA SA RNL + GR LRVD A+
Sbjct: 61 DDETARSACRNLDRRALRGRALRVDLAD 88
>gi|146423464|ref|XP_001487660.1| hypothetical protein PGUG_01037 [Meyerozyma guilliermondii ATCC
6260]
gi|146388781|gb|EDK36939.1| hypothetical protein PGUG_01037 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V + +P+D TEEQ++EI R VGPV RL+ D TGK KG + +Y + ETA SA RNL
Sbjct: 7 VSISGLPFDQTEEQVMEIARSVGPVEELRLIFDTMTGKSKGSAYVKYSEHETAASAVRNL 66
Query: 69 QGYEINGRQLRVDFAEN 85
+ R ++ F+ +
Sbjct: 67 NNLMVGTRNIKCSFSSD 83
>gi|380025295|ref|XP_003696412.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Apis florea]
Length = 135
Score = 75.1 bits (183), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PYD TE +I + + G VV+ L+ D++TGK KGYGF Y+D+ + + A N
Sbjct: 33 IFIGGLPYDLTEGDVITVFSQFGEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNF 92
Query: 69 QGYEINGRQLRVDFAENDKG 88
G +I GR +RVD N K
Sbjct: 93 NGTKILGRTIRVDHVSNYKA 112
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ ++ TE+++ E + G +VS R DR+TG KG+G+ EY D ETA A
Sbjct: 282 TLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEG 341
Query: 68 LQGYEINGRQLRVDFA 83
L G EI GR LR+D+A
Sbjct: 342 LNGVEIAGRSLRLDYA 357
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
+ VFVGN+ ++ EE L + G V S R++ D+ETG+ KG+G+ ++ + AL+A
Sbjct: 182 NSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESAD-ALTAA 240
Query: 66 RNLQGYEINGRQLRVDFAENDKGADRNREQGR 97
L G E++GR++RVD + D NR QGR
Sbjct: 241 MALTGTELDGREIRVDVSTPKPPRDGNR-QGR 271
>gi|156543304|ref|XP_001603981.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Nasonia
vitripennis]
Length = 139
Score = 75.1 bits (183), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PYD TE +I + + G +V+ LV D++TGK KGYGF Y+D+ + + A NL
Sbjct: 36 IFIGGLPYDLTEGDVIAVFSQYGEIVNINLVRDKDTGKQKGYGFLCYEDQRSTILAVDNL 95
Query: 69 QGYEINGRQLRVDFAENDK 87
G +I GR +RVD ++ K
Sbjct: 96 NGIKILGRTIRVDHVKDYK 114
>gi|367020688|ref|XP_003659629.1| hypothetical protein MYCTH_2296912 [Myceliophthora thermophila ATCC
42464]
gi|347006896|gb|AEO54384.1| hypothetical protein MYCTH_2296912 [Myceliophthora thermophila ATCC
42464]
Length = 327
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNIPY+ T+ +L + R + + R+ +DR TG P+G+ ++ E A+ A++ L
Sbjct: 227 LFVGNIPYETTDAELNRLFRGMDNLEDVRVAVDRTTGWPRGFAHADFTTVEAAIEAKKKL 286
Query: 69 QGYEINGRQLRVDFAENDK---GADRNREQGRG 98
+G ++ R LR+DFAE G RN+ GRG
Sbjct: 287 EGAKLGNRVLRIDFAEGYTRKIGKSRNQSSGRG 319
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGNIP+ A E+ + E+ + G +V RL D E+G+PKG+G+ ++ + A
Sbjct: 390 ASPESDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEA 449
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A +L G E+NGR +R+DF+
Sbjct: 450 RQAFNDLNGAELNGRPVRLDFS 471
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS +FVGN+ ++ EE L + G + R+V DR++G+ +G+G+ EY A
Sbjct: 281 ASGASANLFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADA 340
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A + EI+GR++ +D+A
Sbjct: 341 AKAYNAKKDTEIDGRKINLDYA 362
>gi|383847795|ref|XP_003699538.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Megachile
rotundata]
Length = 139
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PYD TE ++ I + G VV+ L+ D++TGK KGYGF Y+D+ + + A N
Sbjct: 36 IFIGGLPYDLTEGDVVTIFSQYGEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNF 95
Query: 69 QGYEINGRQLRVDFAENDKG 88
G +I GR +RVD N K
Sbjct: 96 NGTKILGRTIRVDHVANYKA 115
>gi|402084055|gb|EJT79073.1| nucleic acid-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 304
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +++GNIPY+ T+ +L ++ R + V R+ +DR TG P+G+ ++ EE AL+A +
Sbjct: 206 KSLYIGNIPYETTDVELNKLFRSLDNVTDVRIAVDRSTGWPRGFAHADFSSEEAALAAGQ 265
Query: 67 NLQGYEINGRQLRVDFAENDK 87
L+ + GRQLR+DF++ +
Sbjct: 266 KLEDMTLLGRQLRIDFSQGKR 286
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGNIP+ A E+ L E+ + G ++ RL D E+G+PKG+G+ ++ E A
Sbjct: 383 ASPESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEA 442
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A L G EI+GR +R+DF+
Sbjct: 443 REAFNELNGAEIDGRPVRLDFS 464
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK---DEETALSAR 65
+FVGN+ ++ E L E G + R++ +R+TG+ +G+G+ EY D A A+
Sbjct: 282 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 341
Query: 66 RNLQGYEINGRQLRVDFAENDKGADRNREQG 96
R+ EI+GR++ +D+A G NREQG
Sbjct: 342 RDT---EIDGRKINLDYAT---GRPANREQG 366
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+P+ ATE+ L E+ G V+ RL ++ETG+PKG+G+ ++ + A
Sbjct: 382 SPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAK 441
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A L G+E+ GR +R+DF+
Sbjct: 442 AAHAALNGHELEGRAIRLDFS 462
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE L E G + R+V DRETG+ +G+G+ EY A A
Sbjct: 283 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 342
Query: 69 QGYEINGRQLRVDFA----ENDKGADRNREQGR 97
+G +++GR + +D+A N +GADR++++ R
Sbjct: 343 KGTDLDGRTINLDYAAPRQANTQGADRSQDRAR 375
>gi|308505902|ref|XP_003115134.1| CRE-EXO-3 protein [Caenorhabditis remanei]
gi|308259316|gb|EFP03269.1| CRE-EXO-3 protein [Caenorhabditis remanei]
Length = 334
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%)
Query: 11 VGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQG 70
VGN Y TE++L + VG V + ++V DRETG+P+G+ F E+ DE +A A L G
Sbjct: 260 VGNAAYQTTEQELGDYFSSVGQVTNVKIVCDRETGRPRGFAFVEFADEASAQKACEQLNG 319
Query: 71 YEINGRQLRVDFA 83
+ NGRQLRV+ A
Sbjct: 320 ADFNGRQLRVNLA 332
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGN+P+DA E+ + E+ E G ++ RL D ++G+PKG+G+ +Y + A
Sbjct: 399 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 458
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
+A LQG ++ GR +R+DF+
Sbjct: 459 RAAFNELQGADLLGRPVRLDFS 480
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ E L G + R++ +R+TG+ +G+G+ EY + A A
Sbjct: 297 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 356
Query: 69 QGYEINGRQLRVDFA 83
+G EI+GR + +D+A
Sbjct: 357 KGAEIDGRVINLDYA 371
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ TE+ L E G V RL D+E+GKPKG+G+ E+ D+E A A +
Sbjct: 211 LFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYEAM 270
Query: 69 QGYEINGRQLRVDFAE 84
+G +++GR LR+D+++
Sbjct: 271 KGKDLDGRTLRLDYSQ 286
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG + ++ + L + + G VV+ R+ +DR +GK +G+ + E+ A A +
Sbjct: 112 VFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEM 171
Query: 69 QGYEINGRQLRVDFAE 84
G +I+GR++ VD ++
Sbjct: 172 NGKQIDGREVNVDISQ 187
>gi|332026997|gb|EGI67093.1| RNA-binding motif protein, X-linked 2 [Acromyrmex echinatior]
Length = 172
Score = 73.9 bits (180), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY+ TE +I I + G VV+ L+ D++TGK KGYGF Y+D+ + + A N
Sbjct: 69 IFVGGLPYNLTEGDVIAIFSQYGEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNF 128
Query: 69 QGYEINGRQLRVDFAENDKG 88
G +I GR +RVD N K
Sbjct: 129 NGIKILGRVIRVDHVSNYKA 148
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGN+P+DA E+ + E+ E G ++ RL D ++G+PKG+G+ +Y + A
Sbjct: 391 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 450
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
+A LQG ++ GR +R+DF+
Sbjct: 451 RAAFNELQGADLLGRPVRLDFS 472
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ E L G + R++ +R+TG+ +G+G+ EY + A A
Sbjct: 289 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 348
Query: 69 QGYEINGRQLRVDFA 83
+G EI+GR + +D+A
Sbjct: 349 KGAEIDGRVINLDYA 363
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGN+P+DA E+ + E+ E G ++ RL D ++G+PKG+G+ +Y + A
Sbjct: 389 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 448
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
+A LQG ++ GR +R+DF+
Sbjct: 449 RAAFNELQGADLLGRPVRLDFS 470
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ E L G + R++ +R+TG+ +G+G+ EY + A A
Sbjct: 287 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 346
Query: 69 QGYEINGRQLRVDFA 83
+G EI+GR + +D+A
Sbjct: 347 KGAEIDGRVINLDYA 361
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGN+P+DA E+ + E+ E G ++ RL D ++G+PKG+G+ +Y + A
Sbjct: 392 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 451
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
+A LQG ++ GR +R+DF+
Sbjct: 452 RAAFNELQGADLLGRPVRLDFS 473
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ E L G + R++ +R+TG+ +G+G+ EY + A A
Sbjct: 290 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 349
Query: 69 QGYEINGRQLRVDFA 83
+G EI+GR + +D+A
Sbjct: 350 KGAEIDGRVINLDYA 364
>gi|350423156|ref|XP_003493401.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
impatiens]
Length = 139
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PYD TE +I + + G VV+ L+ D+ TGK KGYGF Y+++++ + A NL
Sbjct: 36 IFIGGLPYDLTEGDVITVFSQYGEVVNINLIRDKNTGKQKGYGFLCYENQKSTVLAVDNL 95
Query: 69 QGYEINGRQLRVDFAENDKG 88
G +I GR +RVD N K
Sbjct: 96 NGIKILGRTIRVDHVANYKA 115
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+P+ ATE+ L E+ G V+ RL ++ETG+PKG+G+ ++ + A
Sbjct: 312 SPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAK 371
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A L G+E+ GR +R+DF+
Sbjct: 372 AAHAALNGHELEGRAIRLDFS 392
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE + E G + R+V DRETG+ +G+G+ EY A A
Sbjct: 213 LFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 272
Query: 69 QGYEINGRQLRVDFA----ENDKGADRNREQGR 97
+G +++GR + +D+A N +GADR++++ R
Sbjct: 273 KGTDLDGRTINLDYAAPRQANTQGADRSQDRAR 305
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGNIP+ A E+ + E+ + G +V RL D E+G+PKG+G+ ++ + A
Sbjct: 404 SPESDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEAR 463
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A +L G E+NGR +R+DF+
Sbjct: 464 QAFNDLNGAELNGRPVRLDFS 484
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS +FVGN+ ++ EE L + G + R+V DR++G+ +G+G+ EY + A
Sbjct: 297 ASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADA 356
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A + EI+GR++ +D+A
Sbjct: 357 AKAYNAKKDTEIDGRKINLDYA 378
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGNIP+ A E+ + E+ + G +V RL D E+G+PKG+G+ ++ + A
Sbjct: 404 SPESDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEAR 463
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A +L G E+NGR +R+DF+
Sbjct: 464 QAFNDLNGAELNGRPVRLDFS 484
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS +FVGN+ ++ EE L + G + R+V DR++G+ +G+G+ EY + A
Sbjct: 297 ASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADA 356
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A + EI+GR++ +D+A
Sbjct: 357 AKAYNAKKDTEIDGRKINLDYA 378
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGNIP+ A E+ L E+ + G ++ RL D E+G+PKG+G+ ++ E A
Sbjct: 298 ASPESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEA 357
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A L G EI+GR +R+DF+
Sbjct: 358 REAFNELNGAEIDGRPVRLDFS 379
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK---DEETALSAR 65
+FVGN+ ++ E L E G + R++ +R+TG+ +G+G+ EY D A A+
Sbjct: 197 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 256
Query: 66 RNLQGYEINGRQLRVDFAENDKGADRNREQG 96
R+ EI+GR++ +D+A G NREQG
Sbjct: 257 RDT---EIDGRKINLDYA---TGRPANREQG 281
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+P+ ATE+ L E+ G V+ RL ++ETG+PKG+G+ ++ + A
Sbjct: 352 SPESDTLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAK 411
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A L G+E+ GR +R+DF+
Sbjct: 412 AAHGALNGHELEGRAVRLDFS 432
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE L E G + R+V DRE+G+ +G+G+ EY A A
Sbjct: 254 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADAAKAMEAK 313
Query: 69 QGYEINGRQLRVDFA-------ENDKGADRNREQG 96
+G +++GR + +D+A + D+ DR R G
Sbjct: 314 KGTDLDGRTINLDYAAPRQANPQQDRTQDRARSYG 348
>gi|378756227|gb|EHY66252.1| hypothetical protein NERG_00948 [Nematocida sp. 1 ERTm2]
Length = 211
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNI + EE ++E VG V+SFR+V DR TGK KGYGFC Y+ A A L
Sbjct: 8 VFVGNIDFTVPEETIVEELSSVGRVISFRMVTDRATGKSKGYGFCTYESPIVADIAVNRL 67
Query: 69 QGYEINGRQLRVDFAEND 86
+ +N R +++++A+N+
Sbjct: 68 K-IMLNNRPVKINYADNN 84
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGNI +DA E + E +E G + + RL DRETG PKG+G+ E E A +A
Sbjct: 349 TLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAAFTA 408
Query: 68 LQGYEINGRQLRVDFA 83
LQG +I GR +R+D+A
Sbjct: 409 LQGADIAGRPIRLDYA 424
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNI ++ EE L E G + R++ DR++G+ KG+G+ E+ D + A A
Sbjct: 244 LFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAK 303
Query: 69 QGYEINGRQLRVDFA 83
G E++GR+LR+DF+
Sbjct: 304 NGAELDGRELRLDFS 318
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
QHR V++GN+ +D EE L E+ E G ++ ++V DRETG+ +G+GF + + A +A
Sbjct: 215 QHR-VYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAA 273
Query: 65 RRNLQGYEINGRQLRVDFA 83
+L G E+ GR +RVD A
Sbjct: 274 VASLNGKELEGRAMRVDLA 292
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V++GN+P+ +L I +E G V ++ D+ TG+ +G+ F E A + NL
Sbjct: 113 VYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAFATMSSVEDANALVENL 172
Query: 69 QGYEINGRQLRVDFAE 84
G + GR LRV+ E
Sbjct: 173 DGSQYGGRTLRVNLRE 188
>gi|268569440|ref|XP_002640523.1| Hypothetical protein CBG18685 [Caenorhabditis briggsae]
Length = 84
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN PY TE+++ + G V + R+V+DRETG+P+G+ F E+ +E A A
Sbjct: 8 VYVGNAPYQTTEQEMGDFFATAGEVTNVRIVLDRETGRPRGFAFVEFAEEAGANRAVEQF 67
Query: 69 QGYEINGRQLRVDFA 83
G + NGR LRV+ A
Sbjct: 68 NGTDFNGRSLRVNLA 82
>gi|340727255|ref|XP_003401963.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
terrestris]
Length = 139
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PYD TE +I + + G VV+ L+ D+ TGK KGYGF Y+++++ + A NL
Sbjct: 36 IFIGGLPYDLTEGDVITVFSQYGEVVNINLIRDKNTGKQKGYGFLCYENQKSTVLAVDNL 95
Query: 69 QGYEINGRQLRVDFAENDKG 88
G +I GR +RVD N K
Sbjct: 96 NGIKILGRIIRVDHVANYKA 115
>gi|242279861|ref|YP_002991990.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242122755|gb|ACS80451.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 88
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ ++EE + E G V+S +L+ DRETG+P+G+GF E +D E A+ A NL
Sbjct: 5 IYVGNLPWSSSEEDVRAAFEEFGEVISVKLINDRETGRPRGFGFVEMED-EGAIQAIENL 63
Query: 69 QGYEINGRQLRVDFA 83
G + GR L+V+ A
Sbjct: 64 DGSDFGGRNLKVNEA 78
>gi|317050466|ref|YP_004111582.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
gi|316945550|gb|ADU65026.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
Length = 82
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ TE++L + E G V S +L+ DRETGK +G+ F E +D E+ L+A
Sbjct: 2 KSIYVGNLPFSTTEDELGNLFAEYGDVYSIKLIADRETGKLRGFAFVEMEDNES-LAAIE 60
Query: 67 NLQGYEINGRQLRVDFA 83
L G+E GR+LRV+ A
Sbjct: 61 ALDGFEFGGRKLRVNEA 77
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+P+ A E+ + E+ G V+ RL D E+G+PKG+G+ +Y + A A
Sbjct: 385 TLFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSVDEARKAYNE 444
Query: 68 LQGYEINGRQLRVDFA 83
LQG EI+GR +R+DF+
Sbjct: 445 LQGAEIDGRPIRLDFS 460
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ TEE L + + G + S R++ +R+TG+ +G+G+ E+ + A A +
Sbjct: 279 LFVGNLSWNVTEEWLHQEFEQFGEL-SARIMTERDTGRSRGFGYVEFTNAADAAKAYEAM 337
Query: 69 QGYEINGRQLRVDF-----AENDKGADRNREQGR 97
+ +EI+GR++ +D+ A D+G + R Q R
Sbjct: 338 KEHEIDGRKINLDYATGRPANKDQGGFKERAQNR 371
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VG++P++ATE+Q+ I +G VVS L + ETG+ GYGF +Y + ++A A
Sbjct: 744 VYVGSVPWNATEDQIKTIFSSIGNVVSCSLKPNLETGRHMGYGFIDYDNPKSAEDAISTF 803
Query: 69 QGYEINGRQLRV 80
GY+INGRQL+V
Sbjct: 804 NGYDINGRQLKV 815
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GNI ++ TE ++ GP+ S L D TG+ +G+ F EY E A++A +N+
Sbjct: 605 IYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINAIQNM 664
Query: 69 QGYEINGRQLRV 80
I+GRQ++V
Sbjct: 665 NQKTISGRQIKV 676
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+S + VFVG I + ++ L E + G V+ R+++DRETG+ +G+GF Y E
Sbjct: 37 MSSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEE 96
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDK 87
A SA + L G +++GR++RV++A ND+
Sbjct: 97 ASSAIQALDGQDLHGRRVRVNYA-NDR 122
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE L E G + R+V DR+TG+ KG+G+ E+ + E A+ A
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 69 QGYEINGRQLRVDFAE-NDKGADRNREQGR 97
+ E++GR+L VDFA A R+R Q R
Sbjct: 309 KDTELDGRKLNVDFANARSNAAPRDRAQSR 338
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +F+GNI + A E + E E G ++ RL D E+G+PKG+G+ ++ + A
Sbjct: 347 SPESDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEAR 406
Query: 63 SARRNLQGYEINGRQLRVDFA 83
SA +L G E+ GR +R+DF+
Sbjct: 407 SAFESLNGSELAGRAMRLDFS 427
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+S + VFVG I + ++ L E + G V+ R+++DRETG+ +G+GF Y E
Sbjct: 37 MSSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEE 96
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDK 87
A SA + L G +++GR++RV++A ND+
Sbjct: 97 ASSAIQALDGQDLHGRRVRVNYA-NDR 122
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+GN+ +++TE+ + + G V + R+V DRET +P+G+G+CE++D +TA A
Sbjct: 285 VFLGNLSFNSTEDSIWAALEQFGTVKAVRIVYDRETQRPRGFGYCEFEDADTANKAIAAS 344
Query: 69 QGYEINGRQLRVDFA 83
+++GRQ+R+D A
Sbjct: 345 GTVDVDGRQIRIDTA 359
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 9 VFVGNIPYDATEEQLIEICRE--VGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
F+GN+P+ A E+ + + V V + RL+ DR+TG+ KG+G+ E + + A
Sbjct: 182 FFIGNLPWSAEEDTVKQFFESQGVSAVYAVRLITDRDTGRKKGFGYIETS--ASDVDAVL 239
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNRE 94
L G + GR+L+VD A N++ A+ +R+
Sbjct: 240 ALNGADFEGRELKVDKA-NERPANADRD 266
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ ++ E+++ E E G V S R+ DRETG PKG+G+ + D +TA +A
Sbjct: 305 TLFIGNLSFNTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAIDG 364
Query: 68 LQGYEINGRQLRVDFA 83
G E++GR +R+DF+
Sbjct: 365 AAGSELDGRVIRLDFS 380
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG + ++ ++ L ++GPV + R+ +DR++G+ +G+G+ E++ E A+ A
Sbjct: 207 IFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQF 266
Query: 69 QGYEINGRQLRVDFA 83
G EI+GR +RVD +
Sbjct: 267 AGKEIDGRPVRVDLS 281
>gi|291400895|ref|XP_002716702.1| PREDICTED: RNA binding motif protein, X-linked 2 [Oryctolagus
cuniculus]
Length = 198
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PY+ TE ++ + + G +V+ LV D++TGK +G+GF Y+D+ + + A N
Sbjct: 37 VFVGGLPYELTEGDILCVFSQYGEIVNIHLVRDKKTGKSRGFGFICYEDQRSTVLAVDNF 96
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD A N
Sbjct: 97 NGIKIKGRTIRVDHASN 113
>gi|17508587|ref|NP_493023.1| Protein R09B3.3 [Caenorhabditis elegans]
gi|3879016|emb|CAB03237.1| Protein R09B3.3 [Caenorhabditis elegans]
Length = 85
Score = 72.4 bits (176), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN P+ TE+ L + G V + R+V DRETG+P+G+ F E+ +E A A
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 69 QGYEINGRQLRVDFAEN 85
G + NGR LRV+ A+N
Sbjct: 66 NGVDFNGRALRVNLAQN 82
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+ G +PYD +E +I I + G V +LV D+ETGK KG+G+ +Y+D+ + A NL
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGR-GGPGMAAIVDPQKQLG 113
G EI GR +RVD A D + E+GR G M +K LG
Sbjct: 95 GGAEIGGRLIRVDHARYKMRDDEDPEEGRIGWENMVRKERAEKGLG 140
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L E RE G VV R+V D +TG+ +GYGF Y + +
Sbjct: 169 TEHK-LFVGNLSWTVTSESLAEAFRECGDVVGARVVYDGDTGRSRGYGFVCYSSKAEMET 227
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L G+E+ GR +RV+ A+ K
Sbjct: 228 ALESLDGFELEGRAIRVNLAQGKK 251
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ L +I ++ ++ +R+TG+ +G+ F + E NL
Sbjct: 81 LYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNL 140
Query: 69 QGYEINGRQLRVDFAENDK 87
G E GR L+V+FA+ K
Sbjct: 141 DGTEYLGRALKVNFADKPK 159
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 72.0 bits (175), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN P+ TEE+L +G + + R+V DRETG+P+G+ F E+ +E +A A +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 69 QGYEINGRQLRVDFA 83
G E NGR LRV+ A
Sbjct: 67 NGAEFNGRPLRVNLA 81
>gi|325972386|ref|YP_004248577.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027624|gb|ADY14383.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 95
Score = 72.0 bits (175), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y TEE L + + G V+S R+++DR+T +PKG+ F E D+ A++A L
Sbjct: 5 IYVGNMSYQTTEEALYSLFAQYGDVMSARIIMDRDTNRPKGFAFVEMDDDSAAVAAISQL 64
Query: 69 QGYEINGRQLRVDFA 83
G E++GR LRV+ A
Sbjct: 65 DGRELDGRNLRVNEA 79
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F G++ + + L E + G +VS R+V D+ TG+ +G+G+ ++ D E+A A
Sbjct: 204 TLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFGDSESATKAYEA 263
Query: 68 LQGYEINGRQLRVDFAE--------NDKGADRNREQG 96
+QG EI+GR L +D+A D+ ADR + G
Sbjct: 264 MQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKRHG 300
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S++ +FVGN+P+D ++ + + EV V S RL D ++G KG+G+ + E A
Sbjct: 304 SAESDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFNSIEDAK 363
Query: 63 SARRNLQGYEI----NGRQLRVDFA 83
SA G I N R +R+DFA
Sbjct: 364 SALDAKNGASIGNGRNSRAVRLDFA 388
>gi|436842523|ref|YP_007326901.1| putative RNA-binding protein rbpE [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432171429|emb|CCO24802.1| putative RNA-binding protein rbpE [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 88
Score = 72.0 bits (175), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ A+EE + + E G V+S +L+ DRETG+P+G+GF E +D + A+ A +L
Sbjct: 5 IYVGNLPWSASEEDVKVLFEEFGEVISVKLITDRETGRPRGFGFVEMED-DGAIKAIESL 63
Query: 69 QGYEINGRQLRVDFA 83
G + GR L+V+ A
Sbjct: 64 DGNDFGGRNLKVNEA 78
>gi|387593844|gb|EIJ88868.1| hypothetical protein NEQG_00687 [Nematocida parisii ERTm3]
gi|387595148|gb|EIJ92774.1| hypothetical protein NEPG_02465 [Nematocida parisii ERTm1]
Length = 211
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNI + EE ++E VG V+SFR+V DR TGK KGYGFC Y+ A A L
Sbjct: 8 VFVGNIDFTIPEETIVEELSSVGRVISFRMVTDRATGKSKGYGFCTYESPIVADIAVNRL 67
Query: 69 QGYEINGRQLRVDFAEND 86
+ +N R +++++A+N+
Sbjct: 68 K-IMLNNRPVKINYADNN 84
>gi|325970873|ref|YP_004247064.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324026111|gb|ADY12870.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 90
Score = 71.6 bits (174), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y+ +EE+L ++ + G V+S ++IDRET +PKG+GF E +D+ A++A L
Sbjct: 5 IYVGNMSYNTSEEELRDLFAQYGTVLSANIIIDRETRRPKGFGFVEMEDDSAAIAAISQL 64
Query: 69 QGYEINGRQLRVDFA 83
G + GR LRV+ A
Sbjct: 65 DGQDFGGRNLRVNEA 79
>gi|291287189|ref|YP_003504005.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884349|gb|ADD68049.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 94
Score = 71.6 bits (174), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y ++E++L E+ +G V S R++ DR+TG+ KG+GF E D E A +A L
Sbjct: 3 IYVGNLSYTSSEDELFELFENMGQVDSARIITDRDTGRSKGFGFVEMADAEQAKAAIEQL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
G E GR L V+ A+ RN ++ GG
Sbjct: 63 NGTEFGGRNLTVNEAK-----PRNNDRSGGG 88
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ E+ L G +V R++ DRETG+ KG+G+ E+ + A A++ +
Sbjct: 219 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQKEM 278
Query: 69 QGYEINGRQLRVDFA 83
YE++GRQL VDF+
Sbjct: 279 HEYELDGRQLNVDFS 293
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ + E + E+ E G + L DR+TG KG+G+ ++ ++ A +A L
Sbjct: 321 LFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEAL 380
Query: 69 QGYEINGRQLRVDFA 83
G +I GR +R+D+A
Sbjct: 381 NGQDIGGRAIRIDYA 395
>gi|221129809|ref|XP_002164481.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Hydra
magnipapillata]
Length = 255
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PYD TE ++ + + G +V+ LV D++TGK KGYGF Y+D+ + + A N
Sbjct: 39 IFIGGLPYDLTEGDVLAVFSQYGEIVNINLVRDKKTGKFKGYGFLCYEDQRSTILAVDNF 98
Query: 69 QGYEINGRQLRVD 81
G ++ GR +RVD
Sbjct: 99 NGIKLGGRTIRVD 111
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A S ++VGN+P+ A + L+++ E G V+ R+V DRETG+ +G+GF Y E
Sbjct: 202 AGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEV 261
Query: 62 LSARRNLQGYEINGRQLRVDFAENDK 87
A L G +++GR LRV+ AE+ +
Sbjct: 262 NDAIAALDGTDMDGRPLRVNIAEDRR 287
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P++ +QL E+ G V+ ++ DRETG +G+GF E A
Sbjct: 115 LFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVELF 174
Query: 69 QGYEINGRQLRVD 81
+ + GR L V+
Sbjct: 175 NRHSLEGRLLTVN 187
>gi|452846802|gb|EME48734.1| hypothetical protein DOTSEDRAFT_67685 [Dothistroma septosporum
NZE10]
Length = 386
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 54/83 (65%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ Y ++ L ++ RE+ V+ R+ IDR +G+P+G+ ++ D E+A A+
Sbjct: 299 KTLFIGNMSYQMSDRDLNDLFREIRNVLDVRVAIDRRSGQPRGFAHADFIDIESAQKAKE 358
Query: 67 NLQGYEINGRQLRVDFAENDKGA 89
+L+ + R+LR+DF+++ GA
Sbjct: 359 HLEKKTVYDRRLRIDFSQSSSGA 381
>gi|172035929|ref|YP_001802430.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354556024|ref|ZP_08975322.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171697383|gb|ACB50364.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353552023|gb|EHC21421.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 98
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T E L E+ E G V L DRETG+P+G+GF E + ++ +A L
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDQETAAIETL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRN-----REQG 96
G + GRQ+RV+ A+ + + RN R+QG
Sbjct: 63 DGADWMGRQMRVNKAKPRENSGRNGSGSFRKQG 95
>gi|154281547|ref|XP_001541586.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411765|gb|EDN07153.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 301
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 17 DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGR 76
D TEEQ+ +I G V FRL+I+ ETGKPKGYGF ++ D + A SA RNL YEI GR
Sbjct: 19 DLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAVRNLNDYEIMGR 78
Query: 77 QLRVDFAENDK 87
++RVD+ N++
Sbjct: 79 KIRVDWPHNNE 89
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A S ++VGN+P+ A + L+++ E G V+ R+V DRETG+ +G+GF Y E
Sbjct: 202 AGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEV 261
Query: 62 LSARRNLQGYEINGRQLRVDFAENDK 87
A L G +++GR LRV+ AE+ +
Sbjct: 262 NDAIAALDGTDMDGRPLRVNIAEDRR 287
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P++ +QL E+ G V+ ++ DRETG +G+GF E A
Sbjct: 115 LFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVELF 174
Query: 69 QGYEINGRQLRVD 81
+ + GR L V+
Sbjct: 175 NRHSLEGRLLTVN 187
>gi|453089609|gb|EMF17649.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
++S + +F+GN+ Y+ ++ L + RE+ V+ R+ IDR +G+P+G+ ++ D E+A
Sbjct: 248 SASPSKTLFIGNMSYEMSDRDLNNLFREIKNVLDVRVAIDRRSGQPRGFAHADFTDVESA 307
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A+ L + GRQLRVDFA
Sbjct: 308 EKAKEFLGSKMVYGRQLRVDFA 329
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++VGN+ ++ T ++L G VV+ R+V D TG +G+GF E E A++A R
Sbjct: 148 VLYVGNLFFEVTAQELEAEFGRFGEVVNSRIVKD-PTGSSRGFGFIELSTTEAAMNAIRG 206
Query: 68 LQGYEINGRQLRV 80
L GR++ V
Sbjct: 207 LDQKVFQGRRMLV 219
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGN+ +DATE+ + E E G + RL DRE+G PKG+G+ E + A
Sbjct: 346 ASEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSIDEA 405
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
+A LQG ++ GR +R+D++
Sbjct: 406 KAAYEALQGADLGGRPMRLDYS 427
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE L E G + R++ DR++G+ KG+G+ E+++ E A A
Sbjct: 247 LFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEAK 306
Query: 69 QGYEINGRQLRVDFA 83
G E++ R +R+DF+
Sbjct: 307 NGAELDNRAIRLDFS 321
>gi|328772157|gb|EGF82196.1| hypothetical protein BATDEDRAFT_34645 [Batrachochytrium
dendrobatidis JAM81]
Length = 153
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++G +PY TE +I + + G VV +V D+ETGK KG+ F Y+D+ + + A NL
Sbjct: 51 IYIGGLPYHLTEGDVICVFSQFGEVVDLDMVRDKETGKSKGFAFLAYEDQRSTVLAVDNL 110
Query: 69 QGYEINGRQLRVDFAENDKGADRN 92
G +I+GR +RVD +G R+
Sbjct: 111 NGIQISGRVIRVDHTAKYRGPRRD 134
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE L E G + R+V DR++G+ KG+G+ E+ + E A+ A
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 69 QGYEINGRQLRVDFAE-NDKGADRNREQGR 97
+ E++GR+L VDFA A R+R Q R
Sbjct: 309 KDTELDGRKLNVDFANARSNAAPRDRAQSR 338
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +F+GNI + A E + E E G ++ RL D E+G+PKG+G+ ++ + A
Sbjct: 347 SPESDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEAR 406
Query: 63 SARRNLQGYEINGRQLRVDFA 83
SA +L G E+ GR +R+DF+
Sbjct: 407 SAFESLNGSELAGRAMRLDFS 427
>gi|325972712|ref|YP_004248903.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027950|gb|ADY14709.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 92
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y+ +EE+L ++ + G VVS ++IDRET +PKG+GF E +++ A +A L
Sbjct: 5 IYVGNLSYNTSEEELRDLFAQYGTVVSANIIIDRETRRPKGFGFVEMQEDAAADAAISQL 64
Query: 69 QGYEINGRQLRVDFA 83
G EI GR LRV+ A
Sbjct: 65 DGKEIGGRNLRVNEA 79
>gi|426258338|ref|XP_004022771.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ovis aries]
Length = 461
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 136 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 195
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 196 NGIKIKGRTIRVDHVSN 212
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 56/83 (67%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P+ +E +L + + G VVS L+ D+E+G+P+G+GF +Y +E++A A NL
Sbjct: 137 LFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKDAVSNL 196
Query: 69 QGYEINGRQLRVDFAENDKGADR 91
G ++GR++ V +E+ A+R
Sbjct: 197 NGMPLDGREISVSISEDKFAANR 219
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +FVGN+P+DA E+ + E+ E G ++ RL D ++G+PKG+G+ +Y + A
Sbjct: 105 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 164
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
+A LQG ++ GR +R+DF+
Sbjct: 165 RAAFNELQGADLLGRPVRLDFS 186
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ E L G + R++ +R+TG+ +G+G+ EY + A A
Sbjct: 3 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 62
Query: 69 QGYEINGRQLRVDFA 83
+G EI+GR + +D+A
Sbjct: 63 KGAEIDGRVINLDYA 77
>gi|324528808|gb|ADY48953.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 65
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 29 EVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83
+ GPVV+ RLV DR+TG+PKG+GFC++ DE +A A L G + NGR LRV++A
Sbjct: 9 QAGPVVNVRLVYDRDTGRPKGFGFCDFADEISAQGAINTLNGADFNGRALRVNWA 63
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y+ TE+ L + E G V S +++ DRETG KG+GF E +E A +A
Sbjct: 5 LYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAIAGT 64
Query: 69 QGYEINGRQLRVDFAENDKGADR 91
G E +GRQLRV+ A + DR
Sbjct: 65 NGREFDGRQLRVNEAMDKPRRDR 87
>gi|112983436|ref|NP_001037638.1| RNA binding motif protein X-linked 2 [Bombyx mori]
gi|109706821|gb|ABG42997.1| RNA binding motif protein X-linked 2 [Bombyx mori]
Length = 181
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PYD TE +I + + G +V+ +V D+ TGKPKG+ F Y+D+ + + A NL
Sbjct: 36 IFVGGLPYDWTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 95
Query: 69 QGYEINGRQLRVDFAENDK 87
+I GR LRVD E K
Sbjct: 96 NSIKILGRTLRVDHCEQYK 114
>gi|357611289|gb|EHJ67406.1| RNA binding motif protein X-linked 2 [Danaus plexippus]
Length = 185
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PYD TE +I + + G +V+ LV D++TG+ KG+ F Y+D+ + + A NL
Sbjct: 36 IFVGGLPYDLTEGDVICVFSQYGEIVNINLVRDKDTGRSKGFAFICYEDQRSTILAVDNL 95
Query: 69 QGYEINGRQLRVDFAE 84
+I GR +RVD E
Sbjct: 96 NSIKILGRTIRVDHCE 111
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ + T E L + +E G VV R++ D ETGK +GYGF Y +E +A ++L
Sbjct: 200 LFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSL 259
Query: 69 QGYEINGRQLRVDFAENDK 87
G E+ GR LRV AE K
Sbjct: 260 NGVELEGRALRVSLAEGRK 278
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ QL + +E G ++ RETG+ +G+ F E + NL
Sbjct: 109 LYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIENL 168
Query: 69 QGYEINGRQLRVDFAENDK 87
G + GR LRV+FA+ K
Sbjct: 169 DGSQYMGRILRVNFADKPK 187
>gi|291408201|ref|XP_002720429.1| PREDICTED: CG10466-like [Oryctolagus cuniculus]
Length = 431
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G VV+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 140 IFLGGLPYELTEGDVICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 199
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 200 NGIKIKGRTIRVDHVAN 216
>gi|281209343|gb|EFA83511.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1109
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+S++R ++VG+IP++ E+Q+ I +G VVS L+ + E+G+ KG+GF +Y + ++A
Sbjct: 870 ASENR-IYVGSIPWNVNEDQIKVIFSSIGNVVSCSLMPNLESGRHKGFGFIDYDNSKSAE 928
Query: 63 SARRNLQGYEINGRQLRV 80
A L GY+I GRQL+V
Sbjct: 929 DAIATLNGYDIGGRQLKV 946
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GNI ++ TE L I GP+ S L D TGK KGY F EY E A +A ++
Sbjct: 687 IYIGNIHFNLTETDLTSIFSPFGPIKSLSLSKDPATGKSKGYCFIEYSYPEAANNAISHM 746
Query: 69 QGYEINGRQLRV 80
+ GRQ++V
Sbjct: 747 NHQSLAGRQIKV 758
>gi|224138286|ref|XP_002322776.1| predicted protein [Populus trichocarpa]
gi|222867406|gb|EEF04537.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PY T +L E+ E G V ++ DR T + +G+GF + E A A R
Sbjct: 118 LYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMF 177
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQL 112
G ++ GR LRV+F E +G +R + R G +D + ++
Sbjct: 178 NGSQVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKI 221
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+H+ ++ GN+ + T E L + ++S +++ +R+TG+ +G+GF + E A +
Sbjct: 217 SEHK-IYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEA 275
Query: 64 ARRNLQGYEINGRQLRVDFA 83
A + G E++GR LR++ A
Sbjct: 276 ALEAMNGEEVDGRPLRLNLA 295
>gi|196007906|ref|XP_002113819.1| hypothetical protein TRIADDRAFT_57615 [Trichoplax adhaerens]
gi|190584223|gb|EDV24293.1| hypothetical protein TRIADDRAFT_57615 [Trichoplax adhaerens]
Length = 575
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
C+FV N+ Y+ TEE L ++ ++ V R+ DRETGKP+G+ ++ D E A +N
Sbjct: 441 CLFVKNLSYNTTEETLQKLFKDCKNV---RIATDRETGKPRGFAHIDFYDSEATSKALKN 497
Query: 68 LQGYEINGRQLRVDFA 83
+Q I+GR + +DFA
Sbjct: 498 MQNKSIDGRNIFLDFA 513
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVG-PVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
+ VF+G I YD + L G S R++ DR TG KG+G+ ++ ET A+
Sbjct: 331 KTVFIGKISYDTDTDSLTNFFTSNGLEPASVRIITDRNTGDSKGFGYADF---ETVADAQ 387
Query: 66 R--NLQGYEINGRQLRVDFA 83
L G E++GR LR++ A
Sbjct: 388 NAIKLDGSELDGRNLRINDA 407
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S+ + VFVGN+ +++T++ + E + G V S R+ D ETG+PKG+ + E+ D ++A
Sbjct: 385 SAPSQTVFVGNLSFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAK 444
Query: 63 SA---RRNLQGYEINGRQLRVDFAE 84
A R+ +G EI+GR++R+DF++
Sbjct: 445 KAVDQGRSSEGLEIDGRRVRLDFSQ 469
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S++ + VFVG + + T E L E G +VS R+V DRETGK +G+G+ ++ D A
Sbjct: 284 STEIKNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAK 343
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A + G E++GR + VD +
Sbjct: 344 AA-LEMAGTELDGRTINVDLS 363
>gi|374314656|ref|YP_005061084.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359350300|gb|AEV28074.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 92
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y+ TE+ L E+ + G V+S +++DRET +PKG+GF E ++ A +A L
Sbjct: 5 IYVGNMSYNTTEDDLRELFSQYGNVLSATIIMDRETRRPKGFGFVEMEENSAADAAISQL 64
Query: 69 QGYEINGRQLRVDFA 83
G EI+GR LRV+ A
Sbjct: 65 DGKEIDGRNLRVNEA 79
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE L E G + R+V DR++G+ KG+G+ E+ + E A+ A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 292
Query: 69 QGYEINGRQLRVDFAE-NDKGADRNREQGR 97
+ E++GR+L VDFA A R+R Q R
Sbjct: 293 KDTELDGRKLNVDFANARSNAAPRDRAQSR 322
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GNI + A E + E E G ++ RL D E+G+PKG+G+ ++ + A SA +
Sbjct: 336 TLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSAFES 395
Query: 68 LQGYEINGRQLRVDFA 83
L G E+ GR +R+DF+
Sbjct: 396 LNGSELAGRAMRLDFS 411
>gi|116192351|ref|XP_001221988.1| hypothetical protein CHGG_05893 [Chaetomium globosum CBS 148.51]
gi|88181806|gb|EAQ89274.1| hypothetical protein CHGG_05893 [Chaetomium globosum CBS 148.51]
Length = 361
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GNIPY+ T+ +L I + +G V R+ +DR TG P+G+ ++ E A+ A++ L
Sbjct: 233 LFIGNIPYETTDAELNRIFQGMGNVKDVRVAVDRTTGWPRGFAHADFPSVEAAIDAKQRL 292
Query: 69 QGYEINGRQLRVDFAE 84
+G ++N R LR+DFA+
Sbjct: 293 EGAKLNDRLLRIDFAQ 308
>gi|340516662|gb|EGR46910.1| predicted protein [Trichoderma reesei QM6a]
Length = 93
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ G +PYD +E +I I + G V +LV D+ETGK KG+G+ +Y+D+ + A NL
Sbjct: 16 IYFGGLPYDLSEGDIITIFSQYGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 75
Query: 69 QGYEINGRQLRVDFA 83
G EI GR LRVD A
Sbjct: 76 GGTEIGGRLLRVDHA 90
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L RE G VV R+V D +TG+ +GYGF Y + +
Sbjct: 175 TEHK-LFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMET 233
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L G+E+ GR +RV+ A+ K
Sbjct: 234 ALESLDGFELEGRAIRVNLAQGKK 257
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ L +I ++ ++ +R+TG+ +G+ F + E NL
Sbjct: 87 LYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNL 146
Query: 69 QGYEINGRQLRVDFAENDK 87
G E GR L+V+FA+ K
Sbjct: 147 DGTEYLGRALKVNFADKPK 165
>gi|336464966|gb|EGO53206.1| hypothetical protein NEUTE1DRAFT_150582 [Neurospora tetrasperma
FGSC 2508]
Length = 395
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V+ G +PYD +E +I I + G V +LV D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FVYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFAENDKGADRNREQGRGG 99
L G EI GR +RVD A D + E+GR G
Sbjct: 94 LGGAEIGGRLIRVDHARYKIRDDEDPEEGRIG 125
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T+ L ++ E G V +L+ DRETG+P+G+GF E E SA L
Sbjct: 3 IYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVEMDTETEEESAIEAL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRG 98
G E GR LRV+ A + + R QGRG
Sbjct: 63 DGAEWMGRALRVNKA---RPREDRRSQGRG 89
>gi|407929152|gb|EKG21988.1| MFS pantothenate transporter [Macrophomina phaseolina MS6]
Length = 345
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 53/81 (65%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ ++ ++ L ++ R + V+ R+ IDR TG+P+G+ ++ DE +A A+
Sbjct: 260 KTLFIGNMSFEMSDRDLNDLFRNIRNVLDVRVAIDRRTGQPRGFAHADFIDETSATKAKE 319
Query: 67 NLQGYEINGRQLRVDFAENDK 87
L E+ GR+LRVD+ E++K
Sbjct: 320 LLSQKELYGRRLRVDYTESNK 340
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 1 MASSQ-HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEE 59
+ASS+ R ++VGN+ Y E+QL + G +V ++ D G +G+G+ E+++++
Sbjct: 155 VASSEGKRTLYVGNLFYQTQEDQLRQEFSRFGNIVKTTIIRD-PAGLSRGFGYVEFENDD 213
Query: 60 TALSARRNLQGYEINGRQLRVDFAENDKGAD---RNREQGRGGP 100
+A A + I+GR+L V + + R R +GR P
Sbjct: 214 SAAVAIVQMNQRVIDGRRLTVQHHRRREQTEERPRRRNEGRVNP 257
>gi|296088196|emb|CBI35712.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TEEQ+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 272 IFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 331
Query: 69 QGYEINGRQLRVDFAENDKG 88
G ++ + L V A G
Sbjct: 332 NGLKMGDKTLTVRRATVGSG 351
>gi|152990027|ref|YP_001355749.1| RNA-binding protein RNP-1 [Nitratiruptor sp. SB155-2]
gi|151421888|dbj|BAF69392.1| RNA-binding protein RNP-1 [Nitratiruptor sp. SB155-2]
Length = 89
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PY + EE + E+ + G V S +L+ DRETG+P+G+GF E D+ +A SA L
Sbjct: 4 IYVGNLPYSSNEEDVRELFAQYGEVTSVKLINDRETGRPRGFGFVEM-DDSSADSAIEAL 62
Query: 69 QGYEINGRQLRVDFA 83
G E GR L+V+ A
Sbjct: 63 DGSEFGGRSLKVNEA 77
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++ GN+ +DATE+ + E E G V S RL DR+TG PKG+G+ E E A +A
Sbjct: 347 TIWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFNA 406
Query: 68 LQGYEINGRQLRVDFAE 84
LQG ++ GR +R+D+A+
Sbjct: 407 LQGQDVGGRPVRLDYAQ 423
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE L E G + R++ DR++G+ KG+G+ E+ + E A A
Sbjct: 242 LFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKALEAK 301
Query: 69 QGYEINGRQLRVDFA 83
++ R +RVDF+
Sbjct: 302 NESLLDNRNIRVDFS 316
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 53/82 (64%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
+S + +FVGN+P+ A E+ + E+ E G +V RL D ++G+PKG+G+ ++ + A
Sbjct: 364 SSPESDTLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFGYVQFASVDEA 423
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A +L G E++GR +R+DF+
Sbjct: 424 REAFNSLNGAELDGRPVRLDFS 445
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ E+ L + G + R+V DR++G+ +G+G+ EY A A +
Sbjct: 262 LFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYKAK 321
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRG 98
+ E++GR++ +D+A G N +QG G
Sbjct: 322 KDTELDGRKINLDYA---TGRPANNQQGGG 348
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L E+ ++ G VV R++ D ETG+ +GYGF Y +E
Sbjct: 234 TEHK-LFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDE 292
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L G E+ GR++RV+ A K
Sbjct: 293 ALSSLNGTELEGREIRVNLALGKK 316
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ QL I ++ ++ DR TG+ +G+ F E +NL
Sbjct: 147 LYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKNL 206
Query: 69 QGYEINGRQLRVDFAENDK 87
G +GR +RV+FA+ K
Sbjct: 207 DGSLYSGRTMRVNFADKPK 225
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ A+E++L E+ G V S RL+ DR+TG+P+G+GF D + A SA
Sbjct: 2 KSIYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMSDTDAA-SAIE 60
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMA 103
L G + GR LRV+ A+ K E+ GGP A
Sbjct: 61 ALDGKDFGGRNLRVNEAQERK------ERPSGGPRQA 91
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L E+ ++ G VV R++ D ETG+ +GYGF Y +E
Sbjct: 236 TEHK-LFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDE 294
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L G E+ GR++RV+ A K
Sbjct: 295 ALSSLNGTELEGREIRVNLALGKK 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ QL I ++ ++ DR TG+ +G+ F E +NL
Sbjct: 149 LYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKNL 208
Query: 69 QGYEINGRQLRVDFAENDK 87
G +GR +RV+FA+ K
Sbjct: 209 DGSLYSGRTMRVNFADKPK 227
>gi|85116496|ref|XP_965061.1| hypothetical protein NCU02467 [Neurospora crassa OR74A]
gi|28926863|gb|EAA35825.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567120|emb|CAE76416.1| conserved hypothetical protein [Neurospora crassa]
Length = 395
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V+ G +PYD +E +I I + G V +LV D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FVYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFAENDKGADRNREQGRGG 99
L G EI GR +RVD A D + E+GR G
Sbjct: 94 LGGAEIGGRLIRVDHARYKIRDDEDPEEGRIG 125
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
Length = 121
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG++P+ E +L E+ E G V + +++ DRETG+ KG+GF E D+E A A +
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 69 QGYEINGRQLRVDFAENDK 87
G E+ GR + V+ AE K
Sbjct: 63 NGAELYGRTIVVNQAEEKK 81
>gi|300123372|emb|CBK24645.2| unnamed protein product [Blastocystis hominis]
Length = 142
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
RCVF+GNIPY+A EE++ EI + D +TGK KG GFCE+ D++TA A +
Sbjct: 8 RCVFIGNIPYEAPEEKVREIMESIKK--------DPKTGKNKGIGFCEFLDQQTAEQAMK 59
Query: 67 NLQGYEINGRQLRVDFAENDKGADRN 92
EI+GR LR+DF + K ++
Sbjct: 60 MNNEKEIDGRPLRIDFPDGGKQGKKD 85
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA-RR 66
+FVGN+ + A E+ L + + G V S RL DRETG+PKG+ + E++D+ A +A
Sbjct: 388 TIFVGNVAFSADEDALWQTFADYGAVRSVRLPTDRETGQPKGFAYVEFEDQAGATAAFEA 447
Query: 67 NLQGYEINGRQLRVDFAE 84
+G EI GR +R+D+++
Sbjct: 448 GKEGLEIGGRPVRLDYSQ 465
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
+ + V N+ ++ ++ L E G +VS R+ +DR++G+ +G+GF ++ + A
Sbjct: 287 SKTIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKAL 346
Query: 66 RNLQGYEINGRQLRVDFAEND 86
+QG E++GR + VD E++
Sbjct: 347 ETMQGKEVDGRAIAVDKTESN 367
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ + AT E L + +E G VV R++ D ETGK +GYGF Y + +A +L
Sbjct: 200 LFVGNLSWSATSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALVSL 259
Query: 69 QGYEINGRQLRVDFAENDK 87
G E+ GR LRV AE K
Sbjct: 260 DGVELEGRALRVSLAEGRK 278
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ QL I +E G ++ RETG+ +G+ F E + NL
Sbjct: 109 LYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDCNAVIENL 168
Query: 69 QGYEINGRQLRVDFAENDK 87
+ GR LRV+F++N K
Sbjct: 169 DESQYMGRILRVNFSDNPK 187
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY T++Q+ E+ GP+ F L D TG KGYGFCEY D A + L
Sbjct: 225 IFVGGLPYHVTDDQVRELLSAFGPLRGFDLKKDPATGMSKGYGFCEYIDHAVGDVAIQGL 284
Query: 69 QGYEINGRQLRVDFA 83
G ++ G+ L V +A
Sbjct: 285 HGMDLGGKTLTVKYA 299
>gi|359497050|ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 410
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TEEQ+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 229 IFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 288
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 289 NGLKMGDKTLTV 300
>gi|296470918|tpg|DAA13033.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 417
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 125 IFLGGLPYELTEGDIICVFSQYGEIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNF 184
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 185 NGIKIKGRTIRVDHVSN 201
>gi|239905799|ref|YP_002952538.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
gi|410465838|ref|ZP_11319034.1| RRM domain-containing RNA-binding protein [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|239795663|dbj|BAH74652.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
gi|409981120|gb|EKO37735.1| RRM domain-containing RNA-binding protein [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 92
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ TEE + ++ GPV S +L+ DRETGKP+G+GF E D+ A A R L
Sbjct: 5 IYVGNLPFRTTEESVRDLFGRYGPVQSVKLISDRETGKPRGFGFVEMDDDAAADEAIRAL 64
Query: 69 QGYEINGRQLRVDFAE 84
G E GR L+V+ A+
Sbjct: 65 DGAEFEGRSLKVNEAK 80
>gi|189219581|ref|YP_001940222.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
gi|189186439|gb|ACD83624.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
Length = 117
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PY+ T+ L EI ++GP+ + +V DR++ + KG+GF E D ++A A L
Sbjct: 33 LYVGNLPYNLTDSDLFEIFAKIGPIKNVEIVRDRKSNRTKGFGFVEMADLDSARKAATVL 92
Query: 69 QGYEINGRQLRVDFAENDK 87
G EI GR++ V A++D+
Sbjct: 93 NGIEIMGRRIIVTGAKSDR 111
>gi|327284806|ref|XP_003227126.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Anolis
carolinensis]
Length = 287
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 VFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVAN 114
>gi|344286268|ref|XP_003414881.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 401
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +PY+ TE +I + + G VV+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 112 VFLGGLPYELTEGDIICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 171
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 172 NGIKIKGRTIRVDHVSN 188
>gi|70983602|ref|XP_747328.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|66844954|gb|EAL85290.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|159123666|gb|EDP48785.1| nucleic acid-binding protein [Aspergillus fumigatus A1163]
Length = 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 53/85 (62%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +++GN+ ++ T+ L E+ R++ V+ R+ +DR TG+P+G+ E+ D E+A A
Sbjct: 232 RTLYLGNLSFEMTDRDLNELFRDINNVIDVRVSVDRRTGQPRGFAHAEFLDVESAQKAFE 291
Query: 67 NLQGYEINGRQLRVDFAENDKGADR 91
L G GR++RVD++ ++ DR
Sbjct: 292 ILSGKAPYGRRIRVDYSSTNRRGDR 316
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T E L E+ E G V L DRETG+P+G+GF E + ++ +A L
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDEETAAIETL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRN-----REQG 96
G + GRQ+RV+ A+ + + R+ R+QG
Sbjct: 63 DGADWMGRQMRVNKAKPRENSGRSGSGSFRKQG 95
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ VFVG I Y + L E + G V+ R++IDRETG+ +G+ F Y E
Sbjct: 37 MSSSK---VFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEE 93
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDK 87
A SA + L G +++GR++RV++A ND+
Sbjct: 94 ASSAIQALDGQDLHGRRVRVNYA-NDR 119
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ +DAT + + EI +E G + L E G PKG+G+ + E A A
Sbjct: 372 TLFVGNLSFDATPDSVTEIFQEYGTITRVSLPTKPEDGMPKGFGYVGFSSVEEAQGAFEA 431
Query: 68 LQGYEINGRQLRVDFA 83
LQG E+NGR +R+DFA
Sbjct: 432 LQGAELNGRSMRLDFA 447
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ EE L E GP + R+V DR TG+ KG+G+ E++ E A +A
Sbjct: 269 LFVGNLSWNVDEEWLGREFEEFGPK-AVRIVTDRATGRSKGFGYVEFETVEAATAALNAK 327
Query: 69 QGYEINGRQLRVDFA 83
+G +++ R L +DF+
Sbjct: 328 KGTDLDNRPLNLDFS 342
>gi|385301669|gb|EIF45843.1| nop13p [Dekkera bruxellensis AWRI1499]
Length = 323
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FVGN+P+D TE+QL E G +V R+ ++GK KG+ F ++KDEE A
Sbjct: 117 RILFVGNLPFDTTEDQLREQFMHCGEIVKIRMATFEDSGKCKGFAFLDFKDEEGPSKALE 176
Query: 67 NLQGYEINGRQLRVDFAEN 85
+ + + GR+LR++F E+
Sbjct: 177 DRSCHRVGGRELRMEFGED 195
>gi|357521139|ref|XP_003630858.1| Proline-rich protein [Medicago truncatula]
gi|355524880|gb|AET05334.1| Proline-rich protein [Medicago truncatula]
gi|388509644|gb|AFK42888.1| unknown [Medicago truncatula]
Length = 395
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 97/184 (52%), Gaps = 29/184 (15%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGM-----A 222
L+ +LA MS+NQL +IMS+MK + QN++QA+Q+L+ P L KALFQAQIMLGM A
Sbjct: 11 LSANLAGMSKNQLYDIMSQMKNLIEQNQQQAKQILIQNPMLTKALFQAQIMLGMVQSQQA 70
Query: 223 TPQV--------------LQMPILRQGPGHPAQPLFQDGQQQVAQLPGLPPLAQKMQLMP 268
P+V Q P ++ P PAQ QD Q V+Q +PP + Q
Sbjct: 71 VPKVQPIAPQNNQQSVQPTQRPSVQPAPILPAQGGIQD-QAGVSQT-QIPPRKHQNQPSV 128
Query: 269 KVQEAQIQLHNQFSAATQPTLHPQIQLPQNAKNQALQQ---ASLPGQSGIPML--PSMHP 323
V A + S +QPT +Q+PQ K Q AS+P S +P + PS+H
Sbjct: 129 PVSYAAVPA---TSHQSQPTAAHSLQMPQQPKGHLTPQVAPASVPQSSQLPHIPPPSVHS 185
Query: 324 SVRP 327
S +P
Sbjct: 186 SSQP 189
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS++ +FVGN+ ++ EE L G + R+V DR++G+ +G+G+ E+ + E A
Sbjct: 259 ASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDA 318
Query: 62 LSARRNLQGYEINGRQLRVDF--AENDKGADRNREQGR 97
A + + EI+GR + +DF A + G R+R Q R
Sbjct: 319 SKAFKAKKDAEIDGRTINLDFANARQNAGGARDRAQSR 356
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GNI ++A E + E G ++ RL D E+G+PKG+G+ ++ + A SA
Sbjct: 370 TLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAFNA 429
Query: 68 LQGYEINGRQLRVDFA 83
LQG E+ GR +R+DF+
Sbjct: 430 LQGTELAGRAMRLDFS 445
>gi|126324405|ref|XP_001377748.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 171
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 VFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQG 96
G +I GR +RVD N + +R G
Sbjct: 98 NGIKIRGRTIRVDHVANYRPPQDSRHVG 125
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS++ +FVGN+ ++ EE L G + R+V DR++G+ +G+G+ E+ + E A
Sbjct: 257 ASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDA 316
Query: 62 LSARRNLQGYEINGRQLRVDF--AENDKGADRNREQGR 97
A + + EI+GR + +DF A + G R+R Q R
Sbjct: 317 SKAFKAKKDAEIDGRTINLDFANARQNAGGARDRAQSR 354
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GNI ++A E + E G ++ RL D E+G+PKG+G+ ++ + A SA
Sbjct: 368 TLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAFNA 427
Query: 68 LQGYEINGRQLRVDFA 83
LQG E+ GR +R+DF+
Sbjct: 428 LQGTELAGRAMRLDFS 443
>gi|350297073|gb|EGZ78050.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 395
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V+ G +PYD +E +I I + G V +LV D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FVYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFAENDKGADRNREQGRGG 99
L G EI GR +RVD A D + E+GR G
Sbjct: 94 LGGAEIGGRLIRVDHARYKIRDDEDPEEGRIG 125
>gi|296273514|ref|YP_003656145.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
gi|296097688|gb|ADG93638.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
Length = 92
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y TEE L + + G V S +L+ DR+TG+ KG+GF D+ AL A L
Sbjct: 3 IYVGNMSYGTTEEGLTTLFSQYGEVSSVKLITDRDTGRAKGFGFVAMNDDSAALKAIEEL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGR 97
G E +GR LR++ A+ + R R
Sbjct: 63 NGKEYDGRTLRINEAKPKEEKPRREFNNR 91
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+++G++ + TE+Q+ E + G V S RL DR+TG PKG+G+ ++ E A +A +
Sbjct: 295 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKA 354
Query: 68 LQGYEINGRQLRVDFA 83
+ G EI GR +RVDFA
Sbjct: 355 MNGAEIAGRAIRVDFA 370
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG + ++ + L G VVS R+V DR++ K +G+G+ E+ D E + A
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAKAIEK- 254
Query: 69 QGYEINGRQLRVDFA 83
G EI+GR +RV++A
Sbjct: 255 DGSEIDGRAIRVNYA 269
>gi|149745621|ref|XP_001500162.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Equus
caballus]
Length = 327
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|242025632|ref|XP_002433228.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
gi|212518769|gb|EEB20490.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
Length = 121
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PYD TE +I + + G V+ LV D+++GK +G+ F Y+D+ + A NL
Sbjct: 36 VFVGGLPYDLTEGDIICVFSQFGEPVNINLVRDKDSGKSRGFCFLCYEDQRSTNLAVDNL 95
Query: 69 QGYEINGRQLRVDFAENDKGADRNR 93
G +I GR +RVD EN K N+
Sbjct: 96 NGVKILGRTIRVDHVENYKPPKNNK 120
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ ++ ++ L ++ R++ V+ R+ IDR TG+P+G+ ++ D E+A+ +
Sbjct: 324 KTLFIGNLAFEMSDADLNKLFRDIRNVIDVRVAIDRRTGQPRGFAHADFVDVESAIKGKD 383
Query: 67 NLQGYEINGRQLRVDFA 83
L G E+ GR LR+DF+
Sbjct: 384 ALLGKEVYGRTLRIDFS 400
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ +D T+E + GP+ S + D G KG+G+ E++ E A +A
Sbjct: 233 IYVGNLLFDITQEDIQREFESFGPIKSVTIASDNR-GLSKGFGYVEFESIEQATAAIEGK 291
Query: 69 QGYEINGRQLRVDF 82
+ GR+L V++
Sbjct: 292 NQAVLEGRRLVVNY 305
>gi|345807592|ref|XP_549256.3| PREDICTED: RNA-binding motif protein, X-linked 2 [Canis lupus
familiaris]
Length = 336
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|50291529|ref|XP_448197.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527508|emb|CAG61148.1| unnamed protein product [Candida glabrata]
Length = 380
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FVGN+ +D T+E L + + G +V R+ +++GK KG+ F ++K+EE A +A +
Sbjct: 223 RILFVGNLSFDTTDELLRKHFQHCGEIVKIRMATFQDSGKCKGFAFVDFKNEEGATNALK 282
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGP 115
+ +I GR LR++F G DR++ Q R P A P+K P
Sbjct: 283 DKSCRKIAGRPLRMEF-----GEDRSKRQVRKRPDAA----PKKSFDLP 322
>gi|451849890|gb|EMD63193.1| hypothetical protein COCSADRAFT_38066 [Cochliobolus sativus ND90Pr]
Length = 326
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ ++ +++ L ++ R++ V+ R+ IDR TG+P+G+ ++ D +A AR
Sbjct: 233 KTLFIGNMSFEMSDKDLNDLFRDIRNVLDVRVAIDRRTGQPRGFAHADFIDVASATRARE 292
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ 95
L+ I GRQLRVDF+++ R + Q
Sbjct: 293 VLKEKVIYGRQLRVDFSKSSPQTQREKRQ 321
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
H +++GN+ Y+ T +QL + G + S ++V D G +G+ + EYK+ A +A
Sbjct: 135 HNVLYIGNLYYEVTPDQLKRVFSRFGDIESIKIVYDNR-GLSRGFAYVEYKNVSDAQAAI 193
Query: 66 RNLQGYEINGRQLRVDF 82
NL GR L V F
Sbjct: 194 DNLDMQVFEGRNLVVQF 210
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+++G++P+D TE+ + E E G V S RL DRETG KG+G+ + D A +A
Sbjct: 303 TLWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEA 362
Query: 68 LQGYEINGRQLRVDFA 83
L G E R++R+DFA
Sbjct: 363 LNGSEFGSRRIRIDFA 378
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
VFVG + ++ + L G VVS R+V+DR+T + +G+G+ E+ D ++A+ A
Sbjct: 205 TVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSAIKA-IE 263
Query: 68 LQGYEINGRQLRVDFA 83
+G E++GR +RV+FA
Sbjct: 264 FEGKELDGRAVRVNFA 279
>gi|330864692|ref|NP_001193477.1| RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 330
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|46580835|ref|YP_011643.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601851|ref|YP_966251.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387154093|ref|YP_005703029.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46450255|gb|AAS96903.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562080|gb|ABM27824.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311234537|gb|ADP87391.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 88
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ ATEEQ+ ++ GPV+S +LV DR+TG+ +G+GF E D E A++A
Sbjct: 3 KSIYVGNLPWSATEEQVQDLFSPFGPVLSVKLVSDRDTGRARGFGFVEMDDAE-AVAAIE 61
Query: 67 NLQGYEINGRQLRVD 81
L GR LRV+
Sbjct: 62 ALDNASFGGRTLRVN 76
>gi|444517993|gb|ELV11894.1| RNA-binding motif protein, X-linked 2, partial [Tupaia chinensis]
Length = 323
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G VV+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 35 IFLGGLPYELTEGDIICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 94
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 95 NGIKIKGRTIRVDHVSN 111
>gi|432900542|ref|XP_004076708.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Oryzias
latipes]
Length = 255
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG PY+ TE L+ + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFVGGFPYELTEGDLLCVFSQYGEIVNVNLVRDKKTGKSKGFCFICYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD +N
Sbjct: 98 NGIKIKGRTIRVDHVKN 114
>gi|198436817|ref|XP_002127336.1| PREDICTED: similar to RNA binding motif protein, X-linked 2 [Ciona
intestinalis]
Length = 377
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V+VG++P++ +E +I + + G VV+ L+ DR+TGK KG+ F Y+D+++ + A N
Sbjct: 38 WVYVGSLPFELSEGDVICVMSQYGEVVNINLIRDRKTGKSKGFAFVCYEDQKSTILAVDN 97
Query: 68 LQGYEINGRQLRVD 81
L G +I GRQ+RVD
Sbjct: 98 LNGSKIKGRQMRVD 111
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
Length = 87
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ ATEE + G V+S +LV DRETG+P+G+GF E D++ AL+A +L
Sbjct: 5 IYVGNLPWSATEEDVRAAFETFGEVISVKLVNDRETGRPRGFGFVEM-DDQGALAAIESL 63
Query: 69 QGYEINGRQLRVDFA 83
G + GR L+V+ A
Sbjct: 64 DGSDFGGRNLKVNEA 78
>gi|432093575|gb|ELK25559.1| RNA-binding motif protein, X-linked 2 [Myotis davidii]
Length = 337
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|373958223|ref|ZP_09618183.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
gi|373894823|gb|EHQ30720.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
Length = 104
Score = 69.3 bits (168), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+PY E +L E+ + G + S +++ D++TG+ KG+GF E D E+AL A +L
Sbjct: 3 IFIGNLPYKIQESELRELFEDYGELTSLKIITDKQTGQSKGFGFAEMPDRESALKALEDL 62
Query: 69 QGYEINGRQLRVDFAE 84
EI GR + V AE
Sbjct: 63 NAAEIYGRNIVVKEAE 78
>gi|396472554|ref|XP_003839148.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
gi|312215717|emb|CBX95669.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
Length = 379
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ ++ +++ L ++ REV VV R+ IDR TG+P+G+ ++ D +A A+
Sbjct: 287 KTLFIGNMSFEMSDKDLNDLFREVRNVVDVRVAIDRRTGQPRGFAHADFLDIASATHAKN 346
Query: 67 NLQGYEINGRQLRVDFAE-----NDKGADRNRE 94
L + GR+LR+DF+ DK AD +E
Sbjct: 347 ILANKVVYGRELRIDFSHPAIESRDKRADSTQE 379
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +++GN+ Y+ T +QL + G + + +++ D G +G+G+ E+K+ A +A
Sbjct: 192 RTLYIGNLYYEVTADQLQRVFSRFGEIENVKIIYDNR-GLSRGFGYVEFKNIPDAQTAID 250
Query: 67 NLQGYEINGRQLRVDFAENDKGADRN 92
NL GR L V F G +N
Sbjct: 251 NLDMQVFEGRNLVVQFHREKPGFGKN 276
>gi|397496325|ref|XP_003846130.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pan paniscus]
Length = 350
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|410989439|ref|XP_004000969.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Felis catus]
Length = 507
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 219 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 278
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 279 NGIKIKGRTIRVDHVSN 295
>gi|327398778|ref|YP_004339647.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
gi|327181407|gb|AEA33588.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
Length = 86
Score = 68.9 bits (167), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+PY TE++L E+ E G V S +++ DRETG+ +G+GF E D++ A A
Sbjct: 3 KTLYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETGRSRGFGFVEMSDDD-AQKAID 61
Query: 67 NLQGYEINGRQLRVDFAENDK 87
+L G GR L+V+ A K
Sbjct: 62 SLNGVNFGGRNLKVNEARERK 82
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 68.9 bits (167), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PY T+E L E G V S +++ DRETG+ KG+GF E E A SA L
Sbjct: 5 IYVGNLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAITGL 64
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPG 101
G ++GR + V+ A R RE GGPG
Sbjct: 65 NGLSVDGRSIVVNLA-------RPRE-ANGGPG 89
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG++ ++ ++ L E + G VVS R++ DRETG+ KG+G+ ++ A A
Sbjct: 255 LFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRETGRSKGFGYVDFASPADAEKAHAEK 314
Query: 69 QGYEINGRQLRVDF----AENDKGADRNREQG 96
QG I+GRQ++VDF + N+ ADR ++ G
Sbjct: 315 QGAFIDGRQIKVDFSTGKSNNNDSADRAKKFG 346
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
+ S + +FVGN+P+DA E+ + E V + S RL D+E+G+ KG+G+ + E
Sbjct: 348 VTSPESDTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVED 407
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA L G INGR R+D++
Sbjct: 408 AKSAFTQLSGQSINGRPCRLDYS 430
>gi|395509895|ref|XP_003759222.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Sarcophilus
harrisii]
Length = 274
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFIGGLPYELTEGDVICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIRGRTIRVDHVAN 114
>gi|367034235|ref|XP_003666400.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
gi|347013672|gb|AEO61155.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
Length = 347
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++ G +PY+ TE +I I + G V +LV D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FIYFGGLPYELTEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFAENDKGADRNREQGRGG 99
L G EI GR +RVD A D + EQ + G
Sbjct: 94 LGGAEIGGRLIRVDHARYKARDDEDLEQYKVG 125
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 7 RC-----VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
RC +F+G + Y E+ L E + G VV R+++DRETG+ +G+GF + E A
Sbjct: 35 RCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAA 94
Query: 62 LSARRNLQGYEINGRQLRVDFAENDK 87
SA + L G +++GR ++V++A ND+
Sbjct: 95 SSAIQALDGRDLHGRVVKVNYA-NDR 119
>gi|317050314|ref|YP_004111430.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
gi|316945398|gb|ADU64874.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
Length = 84
Score = 68.9 bits (167), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++ GN+P+ TE++L + + G V S +L+ DRETG+ +G+GF E DE+ +A
Sbjct: 4 KSIYAGNLPFTTTEDELGNLFAQYGDVYSVKLISDRETGRLRGFGFVEM-DEKDCAAAVE 62
Query: 67 NLQGYEINGRQLRVDFA 83
L GYE+ GR LRV+ A
Sbjct: 63 ALNGYELGGRNLRVNEA 79
>gi|296236404|ref|XP_002763305.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Callithrix
jacchus]
Length = 342
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 117
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 118 NGIKIKGRTIRVDHVSN 134
>gi|431908562|gb|ELK12156.1| RNA-binding motif protein, X-linked 2 [Pteropus alecto]
Length = 346
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 117
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 118 NGIKIKGRTIRVDHVSN 134
>gi|147840589|emb|CAN72715.1| hypothetical protein VITISV_032469 [Vitis vinifera]
Length = 737
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG IP+D TE L+ + + G +V LV D+ TGK KG+ F Y+D+ + A NL
Sbjct: 38 VFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNL 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGAQILGRIIRVDHVSN 114
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+S+ +F+G + Y E+ L E + G VV R+++DRETG+ +G+GF Y E
Sbjct: 36 MSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEE 95
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA + L G +++GR +RV++A
Sbjct: 96 ASSAIQALDGQDLHGRPIRVNYA 118
>gi|195433960|ref|XP_002064974.1| GK14925 [Drosophila willistoni]
gi|194161059|gb|EDW75960.1| GK14925 [Drosophila willistoni]
Length = 158
Score = 68.6 bits (166), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG PY TE L+ + + G VV+ LV D +TGK KG+ F Y+D+ + + A NL
Sbjct: 37 IFVGGFPYTLTEGDLVCVFSQYGEVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 96
Query: 69 QGYEINGRQLRVDFAENDKGADRNRE 94
G +I GR LRVD + K N +
Sbjct: 97 NGIQITGRTLRVDHVSDYKPPKENEK 122
>gi|440632502|gb|ELR02421.1| hypothetical protein GMDG_05479 [Geomyces destructans 20631-21]
Length = 294
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ ++ T+ L ++ R++ V+ R+ IDR TG+P+G+ ++ D E+A+ A
Sbjct: 193 KTLFIGNLAFEMTDADLNKLFRDIVNVIDVRVAIDRRTGQPRGFAHADFTDVESAVKAAE 252
Query: 67 NLQGYEINGRQLRVDFA 83
L+G E+ R LR+D++
Sbjct: 253 ILEGKEVYNRSLRLDYS 269
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA--R 65
V+VGN+ ++ T + L G +V+ R+ D G KG+G+ E++D E+A +A +
Sbjct: 104 SVYVGNLLFEVTPQDLEREFAPYGEIVTSRIAQD-PRGLSKGFGYIEFRDIESARNAIEQ 162
Query: 66 RNLQGYEINGRQLRVDF 82
RN +E GR+L V++
Sbjct: 163 RNQTIFE--GRRLIVNY 177
>gi|321262344|ref|XP_003195891.1| hypothetical protein CGB_H5040W [Cryptococcus gattii WM276]
gi|317462365|gb|ADV24104.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 401
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VG +P++ TE LI I + G ++ LV D+ETGK +G+GF Y+D+ + + A N+
Sbjct: 33 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 92
Query: 69 QGYEINGRQLRVDFAEN 85
G ++ GR L+VD N
Sbjct: 93 NGTQVMGRTLKVDHTRN 109
>gi|303246975|ref|ZP_07333251.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302491682|gb|EFL51565.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 92
Score = 68.6 bits (166), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ TEE + ++ + G V S +L+ DRETGKP+G+GF E D+ A A R+L
Sbjct: 5 IYVGNLPFRTTEESVRDLFAQYGEVQSVKLISDRETGKPRGFGFVEMDDDAAADEAIRSL 64
Query: 69 QGYEINGRQLRVDFAE 84
G E GR L+V+ A+
Sbjct: 65 DGTEFEGRSLKVNEAK 80
>gi|301766430|ref|XP_002918652.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ailuropoda
melanoleuca]
Length = 325
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|300708086|ref|XP_002996230.1| hypothetical protein NCER_100689 [Nosema ceranae BRL01]
gi|239605513|gb|EEQ82559.1| hypothetical protein NCER_100689 [Nosema ceranae BRL01]
Length = 211
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGNI ++ ++LIE VG VV F+L++D+ T K KG+GFCEY E+ L A + +
Sbjct: 7 VFVGNIDFEVPVDKLIEELGAVGKVVDFKLMVDKNTNKSKGFGFCEY---ESPLIAEKAI 63
Query: 69 QGYEI--NGRQLRVDFAEND 86
+ I NGR + +++AE D
Sbjct: 64 KHLNISFNGRPVVINYAEKD 83
>gi|27734072|ref|NP_775552.1| RNA-binding motif protein, X-linked 2 [Mus musculus]
gi|61230302|sp|Q8R0F5.1|RBMX2_MOUSE RecName: Full=RNA-binding motif protein, X-linked 2
gi|20071694|gb|AAH26976.1| RNA binding motif protein, X-linked 2 [Mus musculus]
gi|26345092|dbj|BAC36195.1| unnamed protein product [Mus musculus]
gi|74207503|dbj|BAE40004.1| unnamed protein product [Mus musculus]
Length = 326
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|325183203|emb|CCA17661.1| nucleolin putative [Albugo laibachii Nc14]
Length = 701
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
FVGN+P+DA + + E + G + RL+ DRETG+ +G G+ E+ E A A + L
Sbjct: 524 FVGNLPWDADDNSVCEFFSQCGEIGECRLLSDRETGEFRGIGYVEFTSTEAADEAIK-LN 582
Query: 70 GYEINGRQLRVDFAE 84
G + NGR LR+++A+
Sbjct: 583 GADFNGRSLRINYAK 597
>gi|281351269|gb|EFB26853.1| hypothetical protein PANDA_007127 [Ailuropoda melanoleuca]
Length = 334
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 47 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 106
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 107 NGIKIKGRTIRVDHVSN 123
>gi|4929627|gb|AAD34074.1|AF151837_1 CGI-79 protein [Homo sapiens]
Length = 351
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|330836185|ref|YP_004410826.1| RNP-1 like RNA-binding protein [Sphaerochaeta coccoides DSM
17374]
gi|329748088|gb|AEC01444.1| RNP-1 like RNA-binding protein [Sphaerochaeta coccoides DSM
17374]
Length = 91
Score = 68.6 bits (166), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y TE+QL ++ + G V S ++IDRET +PKG+ F E +D+ A +A L
Sbjct: 5 IYVGNMNYRTTEDQLRDLFAQYGTVSSANIIIDRETHRPKGFAFVEMEDDGAADAAISQL 64
Query: 69 QGYEINGRQLRVDFA 83
G E +GR LRV+ A
Sbjct: 65 DGKEFDGRNLRVNEA 79
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 7 RC-----VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
RC +F+G + Y E+ L E + G VV R+++DRETG+ +G+GF + E A
Sbjct: 35 RCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAA 94
Query: 62 LSARRNLQGYEINGRQLRVDFAENDK 87
SA + L G +++GR ++V++A ND+
Sbjct: 95 SSAIQALDGRDLHGRVVKVNYA-NDR 119
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 68.6 bits (166), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGNI YD T E L E+ + G V L DRETGKP+G+GF E +++ +A L
Sbjct: 3 IYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEEL 62
Query: 69 QGYEINGRQLRVDFA---ENDKGA 89
G E GRQ+RV+ A EN G+
Sbjct: 63 DGAEWLGRQMRVNKAKPRENKGGS 86
>gi|328948645|ref|YP_004365982.1| RNP-1 like RNA-binding protein [Treponema succinifaciens DSM
2489]
gi|328448969|gb|AEB14685.1| RNP-1 like RNA-binding protein [Treponema succinifaciens DSM
2489]
Length = 109
Score = 68.6 bits (166), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y T++ L + G VVS ++IDR+T + KG+GF E +D A L
Sbjct: 5 LYVGNLSYATTQDTLSSLFSAYGNVVSATIIIDRDTNQSKGFGFVEMEDPAETDKAIAKL 64
Query: 69 QGYEINGRQLRVDFAENDKGADR---NREQGR 97
G E++GR++RV++AE K +R +R+ G+
Sbjct: 65 AGKEVDGRKIRVNYAEEKKPRERSGFSRDSGK 96
>gi|378727233|gb|EHY53692.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 381
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 50/77 (64%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ ++ T+ L + R + V+ R+ IDR TG+P+G+ ++ D ++A+ A +
Sbjct: 281 KTLFIGNMSFEMTDRDLSNLFRGIRNVIDVRVAIDRRTGQPRGFAHADFIDVKSAMEAMK 340
Query: 67 NLQGYEINGRQLRVDFA 83
L EI GR+LRVD++
Sbjct: 341 VLSEKEIYGRRLRVDYS 357
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDE--ETALSAR 65
++VGN+ +D TE L++ G V ++V D G KG+G+ ++ + A
Sbjct: 185 TLYVGNLFFDVTETDLVKEMARFGTVTRCKIVRDTR-GLSKGFGYVDFSTQEAADAALEA 243
Query: 66 RNLQGYEINGRQLRVDFAENDKG 88
N+Q +E GR++ V +A G
Sbjct: 244 LNMQMFE--GRRITVQYAARSSG 264
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
+ R +FVG I YD TE++L + G + RL+ DR GKP+GYGF E++++
Sbjct: 92 LTGDPFRTLFVGGISYDTTEKKLKREFEQYGSIKRVRLIYDR-NGKPRGYGFIEFENDRD 150
Query: 61 ALSARRNLQGYEINGRQLRVD 81
A +N G +I+GR++ VD
Sbjct: 151 MKEAYKNADGKKIDGRRVLVD 171
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 55/89 (61%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ ++ +++ L ++ R++ V R+ IDR TG+P+G+ ++ D +A A+
Sbjct: 232 KTLFIGNMSFEMSDKDLNDLFRDIRNVTDVRVAIDRRTGQPRGFAHADFIDVASATRAKE 291
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ 95
L+ I GRQLRVDF+ ++ R + Q
Sbjct: 292 VLKEKIIYGRQLRVDFSTSNTQTQRQKRQ 320
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
H +++GN+ Y+ T +QL + G + S R+V D G +G+ + EYK+ A +A
Sbjct: 135 HNVLYIGNLYYEVTPDQLKRVFSRFGDIESVRMVYDNR-GLSRGFAYVEYKNVSDAQAAI 193
Query: 66 RNLQGYEINGRQLRVDF 82
NL GR L V +
Sbjct: 194 DNLDMQVFEGRNLVVQY 210
>gi|350295431|gb|EGZ76408.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 601
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
C+F+GNIPY+ T+ +L I V + R+ +DR TG P+G+ ++ D E A++A
Sbjct: 441 CLFIGNIPYETTDAELNSIFVGVDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALEK 500
Query: 68 LQGYEINGRQLRVDFAE 84
LQG ++ R +++D+A+
Sbjct: 501 LQGTQLGERTIKIDYAQ 517
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+++ FV NI +DATEE L + G V L D G KGYGF + E
Sbjct: 346 TTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLARD-PRGLSKGYGFVTFATREALE 404
Query: 63 SARRNLQGYEINGRQLRVD 81
A + G +GR++ V+
Sbjct: 405 EACSQVDGSFWHGRRISVE 423
>gi|302846543|ref|XP_002954808.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
gi|300259991|gb|EFJ44214.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
Length = 532
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TEEQ E+ GP+ SF LV DRETG KGYGF Y+D A L
Sbjct: 320 IFVGGLPYYLTEEQCRELLGSFGPIKSFDLVKDRETGNSKGYGFVVYQDSAVTDIACAGL 379
Query: 69 QGYEINGRQLRV 80
G + R L V
Sbjct: 380 NGLRMGDRTLTV 391
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S+ +F+GN+ +D T E + E+ E G V L DR++G KG+G+ ++ +E A
Sbjct: 344 SAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEAT 403
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A LQG ++ GR LRVDFA
Sbjct: 404 AALEALQGQDVAGRPLRVDFA 424
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
+A + +FVGN+ ++ E+ L G +V R++ DRETG+ KG+G+ E+
Sbjct: 242 VAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAAD 301
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A A++++ YE++GR L VDF+
Sbjct: 302 AAKAQKDMHEYELDGRPLNVDFS 324
>gi|403279255|ref|XP_003931175.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 117
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 118 NGIKIKGRTIRVDHVSN 134
>gi|395835423|ref|XP_003790679.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Otolemur
garnettii]
Length = 331
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|332226384|ref|XP_003262369.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Nomascus
leucogenys]
Length = 322
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|426397384|ref|XP_004064898.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Gorilla gorilla
gorilla]
Length = 322
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|355757697|gb|EHH61222.1| RNA-binding motif protein, X-linked 2 [Macaca fascicularis]
Length = 334
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 50 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 109
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 110 NGIKIKGRTIRVDHVSN 126
>gi|410212532|gb|JAA03485.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410251714|gb|JAA13824.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410308778|gb|JAA32989.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410333627|gb|JAA35760.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
Length = 322
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|347734520|ref|ZP_08867565.1| ss-DNA binding protein 12RNP2 [Desulfovibrio sp. A2]
gi|347516846|gb|EGY24046.1| ss-DNA binding protein 12RNP2 [Desulfovibrio sp. A2]
Length = 88
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ A+E+++ ++ + G V+S +L+ DRETG+P+G+GF E + + A SA
Sbjct: 3 KSLYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEMEAAD-ASSAVE 61
Query: 67 NLQGYEINGRQLRVDFAE 84
L GY GR L+V+ A+
Sbjct: 62 ALNGYSFGGRALKVNEAQ 79
>gi|356513105|ref|XP_003525254.1| PREDICTED: uncharacterized protein LOC100811481 [Glycine max]
Length = 379
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA-TPQV 226
L +LA MS+NQL +IMS+MK + QN++QARQ+L+ P L KALFQAQIMLGM PQV
Sbjct: 11 LAANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKALFQAQIMLGMVQAPQV 70
Query: 227 L 227
+
Sbjct: 71 V 71
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 49/83 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y TE+ L + + G V S +++ DRE+G KG+GF E +E A +A
Sbjct: 5 LYVGNLSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIEMSTDEEAAAAITGT 64
Query: 69 QGYEINGRQLRVDFAENDKGADR 91
G+E GRQLRV+ A + DR
Sbjct: 65 NGHEFEGRQLRVNEAMDKPRRDR 87
>gi|118600973|ref|NP_057108.2| RNA-binding motif protein, X-linked 2 [Homo sapiens]
gi|62512110|sp|Q9Y388.2|RBMX2_HUMAN RecName: Full=RNA-binding motif protein, X-linked 2
gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens]
gi|62020769|gb|AAH33750.1| RNA binding motif protein, X-linked 2 [Homo sapiens]
gi|119632205|gb|EAX11800.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Homo sapiens]
gi|158259171|dbj|BAF85544.1| unnamed protein product [Homo sapiens]
Length = 322
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|358381284|gb|EHK18960.1| hypothetical protein TRIVIDRAFT_44275 [Trichoderma virens Gv29-8]
Length = 320
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V+ G +PY+ +E +I I + G V +LV D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FVYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFA 83
L G EI GR LRVD A
Sbjct: 94 LGGAEIGGRLLRVDHA 109
>gi|395545903|ref|XP_003775408.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked 2 [Sarcophilus harrisii]
Length = 310
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 19 VFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 78
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 79 NGIKIRGRTIRVDHVAN 95
>gi|375268714|ref|NP_001243518.1| RNA binding motif protein, X-linked 2 [Bos taurus]
gi|296471256|tpg|DAA13371.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 358
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 117
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 118 NGIKIKGRTIRVDHVSN 134
>gi|388453455|ref|NP_001253777.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|380813648|gb|AFE78698.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|383419077|gb|AFH32752.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|384947606|gb|AFI37408.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|242280537|ref|YP_002992666.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242123431|gb|ACS81127.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 87
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ ATE+++ G VVS +L+ DRETG+P+G+GF E +D A+ A NL
Sbjct: 5 IYVGNLPWSATEDEVRAAFEAFGEVVSVKLIEDRETGRPRGFGFVEMED-AGAMEAIDNL 63
Query: 69 QGYEINGRQLRVDFAE 84
G + GR L+V+ A+
Sbjct: 64 DGKDFGGRNLKVNEAK 79
>gi|340384626|ref|XP_003390812.1| PREDICTED: nucleolar protein 12-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
H VFVGN+P+ A EE+L ++ GP+ R++ D TG KG+ + ++KD + L A
Sbjct: 85 HCSVFVGNVPFGADEEKLRKVFESCGPIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFAC 144
Query: 66 RNLQGYEINGRQLRVDFAENDK 87
+ + E+ GR+LRV +DK
Sbjct: 145 KKNERIEVEGRKLRVFRCRSDK 166
>gi|336465131|gb|EGO53371.1| hypothetical protein NEUTE1DRAFT_52411 [Neurospora tetrasperma FGSC
2508]
Length = 597
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
C+F+GNIPY+ T+ +L I + + R+ +DR TG P+G+ ++ D E A++A
Sbjct: 441 CLFIGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALEK 500
Query: 68 LQGYEINGRQLRVDFAE 84
LQG ++ R +++D+A+
Sbjct: 501 LQGTQLGERTIKIDYAQ 517
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+++ FV NI +DATEE L + G V L D G KGYGF + E
Sbjct: 346 TTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLARD-PRGLSKGYGFVTFATREALE 404
Query: 63 SARRNLQGYEINGRQLRVD 81
A + G +GR++ V+
Sbjct: 405 EACSQVDGSFWHGRRISVE 423
>gi|374316448|ref|YP_005062876.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359352092|gb|AEV29866.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 92
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y+ +EE+L ++ + G V+S ++IDRET +PKG+GF E +++ A +A L
Sbjct: 5 IYVGNMSYNTSEEELRDLFSQYGTVLSASIIIDRETRRPKGFGFVEMEEDSAADAAISQL 64
Query: 69 QGYEINGRQLRVDFA 83
G ++ GR LRV+ A
Sbjct: 65 DGKDLGGRNLRVNEA 79
>gi|355705153|gb|EHH31078.1| RNA-binding motif protein, X-linked 2, partial [Macaca mulatta]
Length = 321
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 37 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 96
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 97 NGIKIKGRTIRVDHVSN 113
>gi|302338833|ref|YP_003804039.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM
11293]
gi|301636018|gb|ADK81445.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM
11293]
Length = 93
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y +TE L ++ + G VVS ++V+DRET + +G+GF E + ++ A +A L
Sbjct: 5 LYVGNLSYSSTEPGLEDLFGQYGQVVSAKIVLDRETKRSRGFGFVEMEQDDAAEAAISAL 64
Query: 69 QGYEINGRQLRVDFA 83
GYE +GR+LRV+ A
Sbjct: 65 DGYEFDGRRLRVNEA 79
>gi|119632204|gb|EAX11799.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Homo sapiens]
Length = 321
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 37 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 96
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 97 NGIKIKGRTIRVDHVSN 113
>gi|402911397|ref|XP_003919621.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Papio anubis]
Length = 322
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|355715858|gb|AES05425.1| RNA binding motif protein, X-linked 2 [Mustela putorius furo]
Length = 182
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 45 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 104
Query: 69 QGYEINGRQLRVDFAENDKGADRNRE 94
G +I GR +RVD N + + E
Sbjct: 105 NGIKIKGRTIRVDHVSNYRAPKDSEE 130
>gi|116283305|gb|AAH03676.1| RBMX2 protein [Homo sapiens]
Length = 163
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAENDKGADRNRE 94
G +I GR +RVD N + + E
Sbjct: 98 NGIKIKGRTIRVDHVSNYRAPKDSEE 123
>gi|111494063|gb|AAI05583.1| RBMX2 protein [Homo sapiens]
Length = 173
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAENDKGADRNRE 94
G +I GR +RVD N + + E
Sbjct: 98 NGIKIKGRTIRVDHVSNYRAPKDSEE 123
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L E G VV R++ D ETG+ +GYGF Y +E
Sbjct: 213 TEHK-LFVGNLSWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDE 271
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L G E+ GR++RV+ A +K
Sbjct: 272 AISSLNGTELEGREIRVNLALGNK 295
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ QL I +E ++ DR TG+ +G+ F + +NL
Sbjct: 126 LYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFAFVTMTTVQDCELVIKNL 185
Query: 69 QGYEINGRQLRVDFAENDK 87
G GR ++V+FA+ K
Sbjct: 186 DGSLYGGRTMKVNFADRPK 204
>gi|355750033|gb|EHH54371.1| hypothetical protein EGM_15194 [Macaca fascicularis]
Length = 310
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G ++ GR +RVD N
Sbjct: 98 NGIKVKGRTIRVDHVSN 114
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 7 RC-----VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
RC +FVG I + + L E + G VV R+++DRETG+ +G+GF Y E A
Sbjct: 35 RCMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEA 94
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
SA + L G +++GR++RV++A
Sbjct: 95 SSAIQALDGQDLHGRRVRVNYA 116
>gi|428224332|ref|YP_007108429.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
gi|427984233|gb|AFY65377.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
Length = 90
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y ATEE + + E G V L DRETG+ +G+ F + D+ T SA L
Sbjct: 3 IYVGNLSYQATEEDVRSVFAEYGTVERVVLPTDRETGRMRGFAFVDLTDDSTEDSAIEEL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
G E GRQLRV+ A + RE+ RGG
Sbjct: 63 NGAEWMGRQLRVNKA-------KPREESRGG 86
>gi|212704871|ref|ZP_03312999.1| hypothetical protein DESPIG_02938 [Desulfovibrio piger ATCC
29098]
gi|212671713|gb|EEB32196.1| hypothetical protein DESPIG_02938 [Desulfovibrio piger ATCC
29098]
Length = 88
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ ATEEQ+ ++ E G V+S +LV DRETG+ +G+GF E +D E A +A
Sbjct: 3 KSIYVGNLPWAATEEQVQDLFAEYGKVLSVKLVSDRETGRARGFGFVEMEDGE-AQAAIE 61
Query: 67 NLQGYEINGRQLRVDFAE 84
L Y GR LRV+ A+
Sbjct: 62 ALDNYSFGGRTLRVNEAK 79
>gi|212545797|ref|XP_002153052.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
gi|210064572|gb|EEA18667.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
Length = 308
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +++GN+ YD T+ +L E+ + V V+ R+ +DR+TG P+G+ ++ D +A +A
Sbjct: 201 RSLYIGNLAYDLTDRELNELFKSVRNVIEVRVAVDRQTGNPRGFAHADFLDTPSAQAALE 260
Query: 67 NLQGYEINGRQLRVDFAENDKGADR 91
L +GR+L+VDF++N K R
Sbjct: 261 ILSSKAPHGRRLKVDFSQNPKRTQR 285
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ ++ATEE + E V V S R+ D+E+G+PKG+ + + E A +A
Sbjct: 411 TLFVGNLSFNATEESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVTFNSVEDAKTAFNQ 470
Query: 68 LQGYEINGRQLRVDFAE 84
L G ++GR +R+DFA+
Sbjct: 471 LNGSNLDGRPVRLDFAK 487
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + ++VGN+ + ++ L E +VS R+V D+++ + +G+G+ ++ + A
Sbjct: 301 SEKTATLWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAE 360
Query: 63 SARRNLQGYEINGRQLRVDFAE-----ND---KGADRNREQG 96
A G + GR++R+DFA ND + A+R R+ G
Sbjct: 361 KAYNEKNGAHLQGREMRLDFASKPAEGNDPTTRAAERARKHG 402
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+S+ +F+G + Y E+ L E + G VV R+++DRETG+ +G+GF Y E
Sbjct: 36 MSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEE 95
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA + L G +++GR +RV++A
Sbjct: 96 ASSAIQALDGQDLHGRPIRVNYA 118
>gi|317154439|ref|YP_004122487.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944690|gb|ADU63741.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ ATE+++ G V S +L+ DRETG+P+G+GF E D+ AL A NL
Sbjct: 5 IYVGNLPWSATEDEIRAAFGAYGEVTSVKLIEDRETGRPRGFGFVEM-DDAGALEAIENL 63
Query: 69 QGYEINGRQLRVDFAENDKGADRNR 93
G + GR ++V+ E A+R R
Sbjct: 64 DGKDFGGRNIKVN--EAKPRAERPR 86
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+ ++ + L + E G V+ R++ DRE+G+ +G+GF Y E A NL
Sbjct: 189 VYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAVSNL 248
Query: 69 QGYEINGRQLRVDFAE 84
G +++GRQ+RV AE
Sbjct: 249 DGTDLDGRQIRVTVAE 264
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ VFVGN+P+ QL + + G V ++ D+ TG+ +G+GF E
Sbjct: 74 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 133
Query: 64 ARRNLQGYEINGRQLRVD 81
A L GY ++GR ++V+
Sbjct: 134 AVEQLNGYVLDGRTIKVN 151
>gi|388520789|gb|AFK48456.1| unknown [Lotus japonicus]
Length = 527
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY EEQ+ E+ + GP+ SF LV D+ETG KGYGFC Y+D A +L
Sbjct: 301 IFVGGLPYYFAEEQIRELLQAFGPLRSFDLVRDKETGNSKGYGFCIYQDPAVTDMACASL 360
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 361 NGLKVGDKTLTV 372
>gi|85117951|ref|XP_965346.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
gi|28927154|gb|EAA36110.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
Length = 606
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
C+F+GNIPY+ T+ +L I + + R+ +DR TG P+G+ ++ D E A++A
Sbjct: 441 CLFIGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALEK 500
Query: 68 LQGYEINGRQLRVDFAE 84
LQG ++ R +++D+A+
Sbjct: 501 LQGTQLGERTIKIDYAQ 517
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+++ FV NI +DATEE L + G V L D G KGYGF + E
Sbjct: 346 TTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLARD-PRGLSKGYGFVTFATREALE 404
Query: 63 SARRNLQGYEINGRQLRVD 81
A + G +GR++ V+
Sbjct: 405 EACSQVDGSFWHGRRISVE 423
>gi|356524138|ref|XP_003530689.1| PREDICTED: uncharacterized protein LOC100801770 [Glycine max]
Length = 392
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA-TPQV 226
L +LA MS+NQL +IMS+MK + QN++QARQ+L+ P L KALFQAQIMLGM PQV
Sbjct: 10 LPANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKALFQAQIMLGMVQAPQV 69
Query: 227 L 227
+
Sbjct: 70 V 70
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 503 PQISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
P ++P++E ALLQQV+SLTPEQ+N LPPEQR QV+QLQQ L
Sbjct: 350 PGLTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQML 390
>gi|449297551|gb|EMC93569.1| hypothetical protein BAUCODRAFT_37252 [Baudoinia compniacensis UAMH
10762]
Length = 404
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 50/76 (65%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ Y ++ L ++ RE+ V+ R+ IDR +G+P+G+ ++ D ++A A+
Sbjct: 316 KTLFIGNMSYQMSDRDLNDLFREIKNVLDVRVAIDRRSGQPRGFAHADFIDVQSAERAKE 375
Query: 67 NLQGYEINGRQLRVDF 82
+L+ I GRQL++DF
Sbjct: 376 HLEKKVIYGRQLKIDF 391
>gi|218885158|ref|YP_002434479.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756112|gb|ACL07011.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 88
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ A+E+++ ++ + G V+S +L+ DRETG+P+G+GF E + + A SA
Sbjct: 3 KSLYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEMEAAD-ANSAVE 61
Query: 67 NLQGYEINGRQLRVDFAE 84
L GY GR L+V+ A+
Sbjct: 62 ALNGYSFGGRALKVNEAQ 79
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG IP+D TE L+ + + G +V LV D+ TGK KG+ F Y+D+ + A NL
Sbjct: 38 VFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNL 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGAQILGRIIRVDHVSN 114
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S + ++VGN+ Y+ +E+ L + G V S +++ DRETG KG+GF E +E A +
Sbjct: 21 SMAKKLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEASA 80
Query: 64 ARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGG 99
A G E GRQLRV+ A + RE+ GG
Sbjct: 81 AIAGTNGREFEGRQLRVNEAMDKP----RRERDNGG 112
>gi|291288414|ref|YP_003505230.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885574|gb|ADD69274.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 94
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y A E+++ ++ + G V S R++ D ETG+ KG+GF E +D+E A +A L
Sbjct: 3 IYVGNLSYKAMEDEIRDMFQSFGDVASVRIITDHETGRSKGFGFVEMEDDEQAKAAIEEL 62
Query: 69 QGYEINGRQLRVD 81
G E+ GR L V+
Sbjct: 63 NGVEMLGRPLTVN 75
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGNIPY+ T+E L I E G V L +DRETG+ +G+GF E +E A L
Sbjct: 3 IYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIETL 62
Query: 69 QGYEINGRQLRVDFAE-NDKGADRNREQG 96
G E GR+LRV+ A + +RN G
Sbjct: 63 DGAEWMGRELRVNKARPKENNNNRNYSGG 91
>gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens]
Length = 276
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|4544401|gb|AAD22311.1| putative glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 185
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEIC-REVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
A +++RC FVG + + AT+EQ IE C E G V +++IDRETG+ KG+ F +KDE++
Sbjct: 40 ADNEYRC-FVGGLAW-ATDEQSIERCFNEFGEVFDSKIIIDRETGRSKGFRFVTFKDEDS 97
Query: 61 ALSARRNLQGYEINGRQL 78
+A + G E++GR +
Sbjct: 98 MRTAIDRMNGQELDGRNI 115
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+++G++ + TE+Q+ E + G V S RL DR+TG PKG+G+ ++ + A +A +
Sbjct: 297 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKA 356
Query: 68 LQGYEINGRQLRVDFA 83
+ G EI GR +RVDFA
Sbjct: 357 MNGAEIAGRAIRVDFA 372
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG + ++ + L G VVS R+V DR++ K +G+G+ E+ D ++ A
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIEK- 256
Query: 69 QGYEINGRQLRVDFA 83
G EI+GR +RV++A
Sbjct: 257 DGSEIDGRAIRVNYA 271
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNIP+ E + + G VV ++V DR++G+ +G+GF + A +A NL
Sbjct: 129 LFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENL 188
Query: 69 QGYEINGRQLRVDFA 83
G E++GR+LRV+FA
Sbjct: 189 DGTELDGRELRVNFA 203
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+P+ QL EIC + G V ++ D+ +G+ +G+ F + A + L
Sbjct: 25 VYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALINAL 84
Query: 69 QGYEINGRQLRVDFAENDK 87
G ++ GR L+V+F ++ K
Sbjct: 85 DGSDMGGRALKVNFPQSQK 103
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ ++ +E+ + + + G V S RL DRE+G+PKG+G+ E++D E A A
Sbjct: 428 TLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAFEA 486
Query: 68 LQGYEINGRQLRVDFAE 84
G +++GR +R+D+++
Sbjct: 487 NNGADLDGRPIRLDYSQ 503
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
Q + VFVG + ++ + L G + S + +DR TGK +G+G+ + E A A
Sbjct: 325 QSKAVFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKA 384
Query: 65 RRNLQGYEINGRQLRVDFA 83
L G EI+ R ++VD +
Sbjct: 385 LE-LNGKEIDNRPIKVDIS 402
>gi|357512617|ref|XP_003626597.1| RNA-binding protein [Medicago truncatula]
gi|355501612|gb|AES82815.1| RNA-binding protein [Medicago truncatula]
Length = 479
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D +++ + E+C +G +V +L+ DRETG+ KGY F YK +E A A ++
Sbjct: 106 VFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDDI 165
Query: 69 QGYEINGRQLRVDFAE 84
E G+ LR +E
Sbjct: 166 HNKEFKGKTLRCLLSE 181
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A+SQ + ++V NIP + T EQL E+ R G V + + +GK + +GF Y + +A
Sbjct: 275 AASQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKASGK-RDFGFIHYAERSSA 333
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
L A + + YEI+G+ L V A+
Sbjct: 334 LKAVKETEKYEIDGQALEVVIAK 356
>gi|297814257|ref|XP_002875012.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320849|gb|EFH51271.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D EE L ++C E+G + RL+ DR++G KGY F +K ++ A A +L
Sbjct: 117 VFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEDL 176
Query: 69 QGYEINGRQLRVDFAE 84
E G+ +R +E
Sbjct: 177 HSKEFKGKTIRCSLSE 192
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A++Q + ++V NIP + + EQL E+ + G V ++V G + +GF Y + +A
Sbjct: 286 AAAQVKALYVKNIPENTSTEQLKELFQRHGEVT--KIVTPPGKGGKRDFGFVHYAERSSA 343
Query: 62 LSARRNLQGYEINGRQLRV 80
L A ++ + YE+NG+ L V
Sbjct: 344 LKAVKDTERYEVNGQPLEV 362
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGNIP+D + +L ++ E G VVS R+V DRE+G+ +G+GF E A NL
Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANL 252
Query: 69 QGYEINGRQLRVDFAE 84
G ++GR +RV+ AE
Sbjct: 253 DGQTLDGRTIRVNAAE 268
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ +FVGN+PYD E L ++ ++ G V ++ +RET + +G+GF E A
Sbjct: 94 SEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADK 153
Query: 64 ARRNLQGYEINGRQLRVD 81
A Y++NGR L V+
Sbjct: 154 AVELYSQYDLNGRLLTVN 171
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+P+DA E+ + EV V S RL ++E+G+ KG+G+ + E A
Sbjct: 338 SPESDTLFVGNLPFDADEDSVGAFFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAK 397
Query: 63 SARRNLQGYEINGRQLRVDFA 83
SA L G INGR R+D++
Sbjct: 398 SAFEQLNGQSINGRNCRLDYS 418
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+ ++ + L E + G V S R++ DRE+G+ KG+G+ ++ E A
Sbjct: 235 SDKPSTLFVGNLSWNVDDAMLAEEFKFCGTVTSARVITDRESGRSKGFGYVDFATPEEAE 294
Query: 63 SARRNLQGYEINGRQLRVDFA------ENDKGADRNREQG 96
A QG I+GR+++VDF+ ND R ++ G
Sbjct: 295 KAHGEKQGAFIDGREIKVDFSTGKATNSNDAAGARAKKYG 334
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG PY+ TE LI + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFVGGFPYELTEGDLICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD ++
Sbjct: 98 NGIKIKGRTIRVDHVKD 114
>gi|124359745|gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding
EF-hand [Medicago truncatula]
Length = 559
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D +++ + E+C +G +V +L+ DRETG+ KGY F YK +E A A ++
Sbjct: 106 VFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDDI 165
Query: 69 QGYEINGRQLRVDFAENDK-----------GADRNREQGRG-GPGMAA---IVDPQKQ 111
E G+ LR +E D R+ G GPG+ + I DPQ Q
Sbjct: 166 HNKEFKGKTLRCLLSETKHRLFIGNIPKTWTEDEFRKAVEGVGPGVESIDLIKDPQNQ 223
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++V NIP + T EQL E+ R G V + + +GK + +GF Y + +AL A +
Sbjct: 360 KALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKASGK-RDFGFIHYAERSSALKAVK 418
Query: 67 NLQGYEINGRQLRVDFAE 84
+ YEI+G+ L V A+
Sbjct: 419 ETEKYEIDGQALEVVIAK 436
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PY T+ L E G V S ++++DRETG+ KG+GF E E A +A L
Sbjct: 5 IYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAITGL 64
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMA 103
G ++GR + V+ A R RE+GR G +
Sbjct: 65 HGMSVDGRSIVVNLA-------RPREEGRSSGGYS 92
>gi|109077776|ref|XP_001110036.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G ++ GR +RVD N
Sbjct: 98 NGIKVKGRTIRVDHVSN 114
>gi|405960385|gb|EKC26312.1| RNA-binding motif protein, X-linked 2 [Crassostrea gigas]
Length = 233
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +PYD TE +I + + G +V+ LV D +TGK +G+ F Y+D+ + + A NL
Sbjct: 26 VFIGGLPYDLTEGDVIAVFSQYGELVNINLVRDGKTGKSRGFCFLCYEDQRSTVLAVDNL 85
Query: 69 QGYEINGRQLRVDFAENDK 87
G ++ GR +RVD E K
Sbjct: 86 NGIKLLGRTIRVDHVEKYK 104
>gi|348552954|ref|XP_003462292.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cavia
porcellus]
Length = 388
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 90 IFLGGLPYELTEGDVICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 149
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 150 NGIKIKGRTIRVDHVSN 166
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 7 RC--------VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDE 58
RC +F+G + Y + L EIC + G VV R+++DRETG+ +G+GF Y +
Sbjct: 34 RCMSNAPNSRLFIGGVSYSIDAQSLGEICSQYGQVVDARIIMDRETGRHRGFGFITYSNV 93
Query: 59 ETALSARRNLQGYEINGRQLRVDFA 83
+ A A + L G +++GR++ V FA
Sbjct: 94 DEASRALQALDGQDLDGRRVEVKFA 118
>gi|367042708|ref|XP_003651734.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
gi|346998996|gb|AEO65398.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GNIPY+ T+ +L + R + + R+ +DR TG P+G+ ++ E A+ A++ L
Sbjct: 228 LFIGNIPYETTDAELNRLFRGIENLRDVRVAVDRTTGWPRGFAHADFTSIEAAIEAKKRL 287
Query: 69 QGYEINGRQLRVDFA 83
+G + R LRVDFA
Sbjct: 288 EGTMLGNRLLRVDFA 302
>gi|391339259|ref|XP_003743969.1| PREDICTED: uncharacterized protein LOC100902788 [Metaseiulus
occidentalis]
Length = 322
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ G + +D TE L+ I + G +V+ LV D+ETGK +G+GF Y+D+ + + A N
Sbjct: 39 IYFGGVSFDLTEGDLLCIFSQYGEIVNINLVRDKETGKSRGFGFICYEDQRSTILAIDNF 98
Query: 69 QGYEINGRQLRVDFAENDK 87
G +I R RVD EN K
Sbjct: 99 NGAKICNRTFRVDHVENYK 117
>gi|168028774|ref|XP_001766902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681881|gb|EDQ68304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 486
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 279 IFVGGLPYYLTEVQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPSVVDIACATL 338
Query: 69 QGYEINGRQLRV 80
G +++ + L V
Sbjct: 339 NGMKMDDKTLNV 350
>gi|323457315|gb|EGB13181.1| hypothetical protein AURANDRAFT_17171, partial [Aureococcus
anophagefferens]
Length = 74
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 43/74 (58%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
F N+ YD TE+ L VGPV ++V D TG+ KGYGFC Y D A +A R+L
Sbjct: 1 FFANVRYDVTEDTLKPFFGAVGPVTHVKIVRDSFTGQSKGYGFCTYSDPLYATTALRSLD 60
Query: 70 GYEINGRQLRVDFA 83
G + GR +R+D A
Sbjct: 61 GQPVEGRPIRLDDA 74
>gi|220905282|ref|YP_002480594.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869581|gb|ACL49916.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 88
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ ATEEQ+ ++ E G V+S +LV DR+TG+ +G+GF E +D E A SA
Sbjct: 3 KSIYVGNLPWSATEEQVQDLFAEYGNVLSVKLVSDRDTGRARGFGFVEMEDGE-ADSAIE 61
Query: 67 NLQGYEINGRQLRVDFAE 84
L + GR LRV+ A+
Sbjct: 62 ALDNFSFGGRTLRVNEAK 79
>gi|452851769|ref|YP_007493453.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
gi|451895423|emb|CCH48302.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
Length = 87
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ +TEE + G V S +L+ DRETG+P+G+GF E +D + AL A NL
Sbjct: 5 IYVGNLPWSSTEEDVRATFEAYGEVYSVKLINDRETGRPRGFGFVEMED-QGALEAIENL 63
Query: 69 QGYEINGRQLRVDFA 83
G + GR L+V+ A
Sbjct: 64 DGKDFGGRNLKVNEA 78
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E LI++ +E G VV R++ D ETG+ +GYGF Y +
Sbjct: 190 TEHK-LFVGNLSWTVTSESLIQVFQEYGTVVGARVLYDGETGRSRGYGFVCYSKRSELET 248
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L E+ GR +RV AE +
Sbjct: 249 ALISLNNVELEGRAIRVSLAEGKR 272
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
SS + ++ GN+PY QL + E G ++ DR++GK +G+ F E
Sbjct: 97 SSVNTKLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDSGKSRGFAFVTMSCVEDCN 156
Query: 63 SARRNLQGYEINGRQLRVDFAENDK 87
+ NL G E GR LRV+ ++ K
Sbjct: 157 TVIENLDGKEFLGRTLRVNLSDKPK 181
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L+E +E G +V R++ D ETG+ +GYGF Y +
Sbjct: 202 TEHK-LFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMEN 260
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L G E+ GR +RV A+ K
Sbjct: 261 ALVSLNGVELEGRAMRVSLAQGKK 284
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ QL I ++ G ++ DR+TG+ +G+ F E + NL
Sbjct: 115 LYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIENL 174
Query: 69 QGYEINGRQLRVDFAENDK 87
G + GR LRV+F++ K
Sbjct: 175 DGSQFMGRILRVNFSDKPK 193
>gi|440803034|gb|ELR23948.1| RNA recognition domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 440
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+++GN+ + T++ L ++C + G V + +++ G+ KGY EY D E + A+
Sbjct: 59 ALYIGNLTWWTTDQDLEDVCSQFGKVKQVKFFENKQNGRSKGYALVEYYDAEASRQAKEK 118
Query: 68 LQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIV 106
LQGY I+ +Q+ V+F A+ N +GGP + ++
Sbjct: 119 LQGYTIHDKQVMVNFVSPQTLAELNNPGKKGGPSLPPMM 157
>gi|68472133|ref|XP_719862.1| hypothetical protein CaO19.6766 [Candida albicans SC5314]
gi|68472368|ref|XP_719745.1| hypothetical protein CaO19.14058 [Candida albicans SC5314]
gi|46441577|gb|EAL00873.1| hypothetical protein CaO19.14058 [Candida albicans SC5314]
gi|46441703|gb|EAL00998.1| hypothetical protein CaO19.6766 [Candida albicans SC5314]
Length = 396
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FVGN+ +D TE+ L E R G +V R+ ++TGK KG+ F ++KDEE A +A +
Sbjct: 215 RILFVGNLSFDTTEDLLEEHFRHCGEIVKIRMATFQDTGKCKGFAFIDFKDEEGATTALK 274
Query: 67 NLQGYEINGRQLRVDFAEN 85
+ + R+LR+++ E+
Sbjct: 275 SKLTKMLINRKLRMEYGED 293
>gi|343887401|ref|NP_001230600.1| RNA binding motif protein, X-linked 2 [Sus scrofa]
Length = 329
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +FVG + Y E L E + G V+ R+++DRETG+ +G+GF + E
Sbjct: 37 MSSSK---LFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEE 93
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA + + G +++GR+++V++A
Sbjct: 94 ATSAMQAMDGQDLHGRRIKVNYA 116
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ +DA E + E E G VV+ RL D+ETG PKG+G+ + + A +A
Sbjct: 401 TLFLGNLSFDADENTVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFSSIDDAKTAFEA 460
Query: 68 LQGYEINGRQLRVDFA 83
+ G EI GR +R+D+A
Sbjct: 461 MTGAEIAGRPVRLDYA 476
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FVGN+ ++ +E L+ E G + R++ DRE+G+ KG+G+ E+ +A +A +
Sbjct: 296 KNLFVGNLSWNVDDEWLMREFEEFGEISGARVISDRESGRSKGFGYVEFTSSASAAAALK 355
Query: 67 NLQGYEINGRQLRVDFAENDKGA-DRNREQGR 97
+G I+GR+ VDF+ A ++R QGR
Sbjct: 356 AKKGSLIDGREANVDFSTPRSDAPPKDRAQGR 387
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG + +D T E L E G + +++ DRETG+ +G+GF + ++ A +A++ +
Sbjct: 10 LFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDAANAKKCM 69
Query: 69 QGYEINGRQLRVDFA 83
G E++ RQ+RVD+A
Sbjct: 70 DGTELDSRQIRVDYA 84
>gi|406954527|gb|EKD83359.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 95
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PY ATEEQL + G V + ++ DR+TG+ KG+GF E ++ A A + L
Sbjct: 3 IYVGNLPYSATEEQLKTMFGVYGEVTTASIIKDRDTGRSKGFGFVEMTNDAAAEEAIQAL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
++NGR ++V+ A + +R+ RGG
Sbjct: 63 NETDMNGRNIKVNQARPKEKRERSGGGDRGG 93
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+S+ +F+G + Y E+ L E + G VV R+++DRETG+ +G+GF Y E
Sbjct: 36 MSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEE 95
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA + L G +++GR +RV++A
Sbjct: 96 ASSAIQALDGQDLHGRPIRVNYA 118
>gi|320168946|gb|EFW45845.1| hypothetical protein CAOG_03829 [Capsaspora owczarzaki ATCC 30864]
Length = 617
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 6 HR-CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
HR VFVGN+P +A EE L E + G + + RLV D ET KG+GF +KD + A
Sbjct: 422 HRKSVFVGNLPMNAEEEALWEAFGKCGDIATVRLVRDAETNVGKGFGFVSFKDAASIDLA 481
Query: 65 RRNLQGYEINGRQLRVDFAENDKGADRNREQ 95
R + EI GR+LRV A ++ + +E+
Sbjct: 482 VRLHEIAEIGGRKLRVTRAGSEAVMKKKKEE 512
>gi|168021052|ref|XP_001763056.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685868|gb|EDQ72261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 289 IFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPSVVDIACATL 348
Query: 69 QGYEINGRQLRV 80
G +++ + L V
Sbjct: 349 NGMKMDDKTLNV 360
>gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35211955|dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 122
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P+ ATE++++E E G V S ++ +DRETG+P+G+ F + + E +A +L
Sbjct: 3 LFVGNLPFSATEQEIVEAFTEYGEVKSVKIPMDRETGRPRGFAFVDLESETAEQAAIDDL 62
Query: 69 QGYEINGRQLRVDFAE 84
G N R++RV+ AE
Sbjct: 63 DGATWNNREIRVNKAE 78
>gi|242279034|ref|YP_002991163.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242121928|gb|ACS79624.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 87
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ ATEE + G VVS +L+ DRETG+P+G+GF E D+ A+ A L
Sbjct: 5 IYVGNLPWSATEEDVRASFEAYGEVVSVKLIEDRETGRPRGFGFVEM-DDNGAIDAIEAL 63
Query: 69 QGYEINGRQLRVDFA 83
G + GR L+V+ A
Sbjct: 64 DGKDFGGRNLKVNEA 78
>gi|74227727|dbj|BAE35704.1| unnamed protein product [Mus musculus]
Length = 165
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVSN 114
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG + + T+ L ++ G + +V+DRETG+ +G+GF + D+ +A +A L
Sbjct: 5 LFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAVSEL 64
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGR 97
G +++GR + V AE+ +DRNR R
Sbjct: 65 NGKDLDGRNIVVSVAEDKSRSDRNRNTNR 93
>gi|334186262|ref|NP_001190647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332656542|gb|AEE81942.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 467
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D EE L ++C E+G + RL+ DR++G KGY F +K ++ A A L
Sbjct: 98 VFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEEL 157
Query: 69 QGYEINGRQLRVDFAE 84
E G+ +R +E
Sbjct: 158 HSKEFKGKTIRCSLSE 173
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A++Q + ++V NIP + + EQL E+ + G V ++V G + +GF Y + +A
Sbjct: 259 AAAQVKALYVKNIPENTSTEQLKELFQRHGEVT--KIVTPPGKGGKRDFGFVHYAERSSA 316
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
L A ++ + YE+NG+ L V A+
Sbjct: 317 LKAVKDTERYEVNGQPLEVVLAK 339
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGN+P+ T+E L E+ + G + + DRETG P+G+ + ++ E++A A + L
Sbjct: 403 VFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKATK-L 461
Query: 69 QGYEINGRQLRVDF 82
G ++ GRQ+RV++
Sbjct: 462 SGTDLEGRQIRVNY 475
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
+ + VFVGN+P+ T+E L +I G + L D E+GK KG+ F ++ DE++A A
Sbjct: 292 RSKSVFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKA 351
Query: 65 RRNLQGYEINGRQLRVDFA 83
G + GR LRV+++
Sbjct: 352 -VGKNGEDCEGRDLRVNYS 369
>gi|182888560|ref|NP_001107258.2| RNA-binding motif protein, X-linked 2 [Rattus norvegicus]
gi|374253659|sp|B0BN49.1|RBMX2_RAT RecName: Full=RNA-binding motif protein, X-linked 2
gi|165970686|gb|AAI58685.1| Rbmx2 protein [Rattus norvegicus]
Length = 328
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIKGRTIRVDHVAN 114
>gi|115456325|ref|NP_001051763.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|122246709|sp|Q10B98.1|C3H25_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=OsC3H25
gi|15042832|gb|AAK82455.1|AC091247_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|18855068|gb|AAL79760.1|AC096687_24 putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
gi|108711850|gb|ABF99645.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550234|dbj|BAF13677.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|125588469|gb|EAZ29133.1| hypothetical protein OsJ_13196 [Oryza sativa Japonica Group]
Length = 312
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG IPYD TE L+ + + G VV LV D+ TGK KG+ F Y+D+ + + A NL
Sbjct: 38 VFVGGIPYDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 69 QGYEINGRQLRVD 81
G ++ GR +RVD
Sbjct: 98 NGAKVLGRIVRVD 110
>gi|365988124|ref|XP_003670893.1| hypothetical protein NDAI_0F03320 [Naumovozyma dairenensis CBS 421]
gi|343769664|emb|CCD25650.1| hypothetical protein NDAI_0F03320 [Naumovozyma dairenensis CBS 421]
Length = 399
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FVGN+ +D T+E L + + G ++ R+ ++GK KG+ F ++K+EE A +A +
Sbjct: 238 RILFVGNLSFDTTDELLRKHFQHCGEIIKIRMATFEDSGKCKGFAFVDFKNEEGATNALK 297
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQGRGGP 100
+ +I GR LR++F G DR++ Q R P
Sbjct: 298 DKTCRKIAGRPLRMEF-----GEDRSKRQVRRKP 326
>gi|119484580|ref|XP_001262069.1| nucleic acid-binding protein [Neosartorya fischeri NRRL 181]
gi|119410225|gb|EAW20172.1| nucleic acid-binding protein [Neosartorya fischeri NRRL 181]
Length = 307
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +++GN+ ++ T+ L E+ R++ V+ R+ +DR TG+P+G+ E+ D E+A A
Sbjct: 215 RTLYLGNLSFEMTDRDLNELFRDINNVIDVRVSVDRRTGQPRGFAHAEFLDVESAQKAFE 274
Query: 67 NLQGYEINGRQLRVDFAENDKGADR 91
L G GR++RVD++ ++ R
Sbjct: 275 ILSGKAPFGRRIRVDYSSTNRRGSR 299
>gi|307106531|gb|EFN54776.1| hypothetical protein CHLNCDRAFT_58050 [Chlorella variabilis]
Length = 354
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY TEEQ E+ G + SF LV D+ETG+ KGYGFC Y+D A + L
Sbjct: 157 IFIGGLPYYLTEEQCRELLASFGAIKSFDLVKDKETGQSKGYGFCVYEDPRVTDVACQGL 216
Query: 69 QGYEINGRQLRV 80
G + R L V
Sbjct: 217 NGMRMGDRTLTV 228
>gi|220906769|ref|YP_002482080.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219863380|gb|ACL43719.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 104
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GN+ Y+AT+E L I E G V L +DRETGK +G+GF E + +A +L
Sbjct: 3 IYIGNLSYNATQEDLTAIFAEYGTVKQIHLPVDRETGKKRGFGFVEMSTDAEEDAAIADL 62
Query: 69 QGYEINGRQLRVDFA 83
G E GRQLRV+ A
Sbjct: 63 DGAEWMGRQLRVNKA 77
>gi|440473347|gb|ELQ42150.1| nucleolar protein 4 [Magnaporthe oryzae Y34]
gi|440489430|gb|ELQ69086.1| nucleolar protein 4 [Magnaporthe oryzae P131]
Length = 759
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
+ R +FV ++P AT E L E+ + PV +V+D++T P+GYGF + D E AL A
Sbjct: 44 ERRSLFVRSLPPSATSETLTELFSQHFPVKHATVVLDQKTKTPRGYGFVTFTDAEDALQA 103
Query: 65 RRNLQGYEINGRQLRVDFAE 84
+ L + I GR+LR++ AE
Sbjct: 104 KEKLDNHLIEGRRLRLEIAE 123
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+ N+P+ T+EQL E G V R+V+D T K G GF + + E A S R
Sbjct: 353 TLFIRNLPFTTTDEQLKEHFTHFGAVRYARVVMDHATQKSAGKGFVCFFNAEDAESCLRA 412
Query: 68 LQGY 71
Y
Sbjct: 413 APKY 416
>gi|220905189|ref|YP_002480501.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869488|gb|ACL49823.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 88
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA+S ++VGN+P+ ATE+ + ++ G +S +L+ DRETG+ +G+GF E +D+E
Sbjct: 1 MATS----IYVGNLPWSATEDAVRDLFSAHGDPISVKLISDRETGRARGFGFVEMEDDE- 55
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADR 91
A +A L G + GR LRV+ AE + A R
Sbjct: 56 AQNAISALNGMDFGGRALRVNKAEERRPAPR 86
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 100
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T + L E+ E G V L +DRETGK +G+GF E +E A L
Sbjct: 3 IYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIETL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPG 101
G E GRQ++V+ A R +E GG G
Sbjct: 63 DGAEWMGRQMKVNKA-------RPKEDNFGGGG 88
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VG++ Y+ TEE L I G V + +L++D ETG+ KGYGF Y++ E A A +L
Sbjct: 240 LYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHL 299
Query: 69 QGYEINGRQLRV-DFAEN----DKGADRNREQGRGGPGMAA 104
G+EI GR ++V EN DK A E R G + A
Sbjct: 300 NGFEIAGRPMKVGHVTENHSVYDKTAFEVDELDRAGYDLGA 340
>gi|171684721|ref|XP_001907302.1| hypothetical protein [Podospora anserina S mat+]
gi|170942321|emb|CAP67973.1| unnamed protein product [Podospora anserina S mat+]
Length = 309
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNIPY+ T+ +L + + V R+ +DR TG P+G+ ++ D +A +A+ L
Sbjct: 191 LFVGNIPYETTDAELNNLFAGLSNVTDIRIAVDRTTGWPRGFAHVDFTDVASADAAKEKL 250
Query: 69 QGYEINGRQLRVDFA 83
+ GRQL++DFA
Sbjct: 251 AATNLGGRQLKIDFA 265
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
+ R +FV NI ++ E+ L E G + + D G +GYGF +KD +A
Sbjct: 91 KSRAIFVRNIVFEVNEQHLKEAFETYGEIEDTYVARD-PRGMSRGYGFVTFKDASAVSAA 149
Query: 65 RRNLQGYEINGRQLRVDFAENDKGADRNREQGR 97
+ G +GR++ +++ R REQ R
Sbjct: 150 CAAVNGSFWHGRRVTCIPRRDEEQTPRAREQNR 182
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG + +D TE+ L E + G + +++DRETG+P+G+GF +Y + E A A +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEGM 66
Query: 69 QGYEINGRQLRVDFA 83
G ++GR +RV+ A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG + +D TE+ L E + G + +++DRETG+P+G+GF +Y + E A A +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEGM 66
Query: 69 QGYEINGRQLRVDFA 83
G ++GR +RV+ A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGNIP+ + +L ++ E G VVS R+V DRETG+ +G+GF E A NL
Sbjct: 232 IYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANL 291
Query: 69 QGYEINGRQLRVDFAENDKGADRNR 93
G ++GR +RV+ AE DR+R
Sbjct: 292 DGQSLDGRTIRVNVAE-----DRSR 311
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+PYD E L + + G V ++ +R+T + +G+GF E A A
Sbjct: 138 LFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMY 197
Query: 69 QGYEINGRQLRVD 81
Y++NGR L V+
Sbjct: 198 NRYDVNGRLLTVN 210
>gi|449439685|ref|XP_004137616.1| PREDICTED: uncharacterized protein LOC101206596 [Cucumis sativus]
Length = 307
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
+A MS+NQL +IMS+MK + QN++QA+Q+L+ P L KALFQAQIMLGM P
Sbjct: 15 IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRP 67
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L E G VV R++ D ETG+ +GYGF Y E
Sbjct: 205 TEHK-LFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDE 263
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L G E+ GR++RV+ A K
Sbjct: 264 ALSSLNGMEMEGREMRVNLALGKK 287
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS+ ++ GN+PY+ QL I +E ++ DR TG+ +G+ F +
Sbjct: 111 ASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDC 170
Query: 62 LSARRNLQGYEINGRQLRVDFAENDK 87
+NL G GR ++V+FA+ K
Sbjct: 171 ELVIKNLDGSLYGGRTMKVNFADRPK 196
>gi|436841541|ref|YP_007325919.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13
= DSM 14728]
gi|432170447|emb|CCO23818.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13
= DSM 14728]
Length = 87
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ A+E+ + G V+S +L+ DRETG+P+G+GF E +D AL A NL
Sbjct: 5 IYVGNLPWSASEDDVRAAFEAYGEVISVKLIEDRETGRPRGFGFVEMED-NGALDAIDNL 63
Query: 69 QGYEINGRQLRVDFAE 84
G + GR L+V+ A+
Sbjct: 64 DGKDFGGRNLKVNEAK 79
>gi|46579668|ref|YP_010476.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602850|ref|YP_967250.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387153021|ref|YP_005701957.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46449083|gb|AAS95735.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120563079|gb|ABM28823.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311233465|gb|ADP86319.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 90
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ A +E + ++ G VVS +L+ DRETG+P+G+GF E D + +A
Sbjct: 3 KTLYVGNLPFTAEQEDVRDLFAAHGEVVSVKLMFDRETGRPRGFGFVEMADADMR-TAME 61
Query: 67 NLQGYEINGRQLRVDFAE 84
L GY+ GR LRV+ A+
Sbjct: 62 ALDGYDFMGRNLRVNEAQ 79
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ + ATEE+L + G V + +++DRETG+ +G+ F E D E A A NL
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 69 QGYEINGRQLRVD 81
G+EI+GR + V+
Sbjct: 117 NGHEIDGRSVTVN 129
>gi|78043337|ref|YP_359251.1| RNA-binding protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77995452|gb|ABB14351.1| RNA-binding protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 83
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ EQL EI E G V+ R+++++ TG+ +GYGF E +DE+ A
Sbjct: 3 KTLYVGNLPWKIRSEQLQEIASEFGEVIGARVILEKSTGRSRGYGFIEVRDED-AEKFMT 61
Query: 67 NLQGYEINGRQLRVDFAENDKG 88
L G E+ GRQL V A G
Sbjct: 62 GLNGKEVEGRQLVVSEARERNG 83
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ + ATEE+L + G V + +++DRETG+ +G+ F E D E A A NL
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 69 QGYEINGRQLRVD 81
G+EI+GR + V+
Sbjct: 117 NGHEIDGRSVTVN 129
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ + ATEE+L + G V + +++DRETG+ +G+ F E D E A A NL
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 69 QGYEINGRQLRVD 81
G+EI+GR + V+
Sbjct: 117 NGHEIDGRSVTVN 129
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G + YD TE ++ + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 32 IFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTGKSKGFCFIGYEDQRSTILAVDNF 91
Query: 69 QGYEINGRQLRVDFAEN 85
G ++ GR +RVD +N
Sbjct: 92 NGIKLCGRSIRVDHVQN 108
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VG +P++ TE LI I + G ++ LV D+ETGK +G+GF Y+D+ + + A N+
Sbjct: 162 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 221
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR L+VD N
Sbjct: 222 NGTQIIGRTLKVDHTRN 238
>gi|18411454|ref|NP_567192.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|79324963|ref|NP_001031566.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13605916|gb|AAK32943.1|AF367357_1 AT4g00830/A_TM018A10_14 [Arabidopsis thaliana]
gi|21360555|gb|AAM47474.1| AT4g00830/A_TM018A10_14 [Arabidopsis thaliana]
gi|110743368|dbj|BAE99571.1| hypothetical protein [Arabidopsis thaliana]
gi|332656540|gb|AEE81940.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332656541|gb|AEE81941.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D EE L ++C E+G + RL+ DR++G KGY F +K ++ A A L
Sbjct: 118 VFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEEL 177
Query: 69 QGYEINGRQLRVDFAE 84
E G+ +R +E
Sbjct: 178 HSKEFKGKTIRCSLSE 193
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A++Q + ++V NIP + + EQL E+ + G V ++V G + +GF Y + +A
Sbjct: 287 AAAQVKALYVKNIPENTSTEQLKELFQRHGEVT--KIVTPPGKGGKRDFGFVHYAERSSA 344
Query: 62 LSARRNLQGYEINGRQLRV 80
L A ++ + YE+NG+ L V
Sbjct: 345 LKAVKDTERYEVNGQPLEV 363
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S+ +F+GN+ +D T E + E+ E G V L DR++G KG+G+ ++ +E A
Sbjct: 331 SAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEAT 390
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A L G ++ GR LRVDFA
Sbjct: 391 AALEALHGQDVAGRPLRVDFA 411
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
+A + +FVGN+ ++ E+ L G +V R++ DRETG+ KG+G+ E+
Sbjct: 229 VAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAAD 288
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A A++++ YE++GR L VDF+
Sbjct: 289 AAKAQKDMHEYELDGRPLNVDFS 311
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
++ +FVG I Y+ TE+QL + GPV S RLV D E GK +GYGF EY+ EE +A
Sbjct: 29 YKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPE-GKSRGYGFVEYEKEEDMKAAY 87
Query: 66 RNLQGYEINGRQLRVD 81
+ G +I+GR++ VD
Sbjct: 88 KYADGKKIDGRRVVVD 103
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F GN+ ++ EE L E G +V R+V DRE+G+ +G+G+ E+ + E A+ A
Sbjct: 235 LFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFGYVEFANVEDAVKAHAAK 294
Query: 69 QGYEINGRQLRVDFA 83
+ E++GR+L +DFA
Sbjct: 295 KDAELDGRKLNLDFA 309
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +F+GN+P+ A E + E+ + G ++ RL D ++G+PKG+G+ ++ + A
Sbjct: 335 SPESDTLFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEAR 394
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A G ++ GR +R+DF+
Sbjct: 395 AALEAEYGADLGGRAIRIDFS 415
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +F+G + Y+ ++ L + G VV R++ DRETG+ +G+GF + EE+
Sbjct: 8 MSSSK---LFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEES 64
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGA 89
A SA ++ G ++NGR +RV +A ND+ A
Sbjct: 65 ATSA-LSMDGQDLNGRNIRVSYA-NDRQA 91
>gi|328952775|ref|YP_004370109.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
gi|328453099|gb|AEB08928.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
Length = 97
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ ++ TEEQL + E GPV S +++ DR+TG+P+G+GF E + + A L
Sbjct: 5 LYVGNLSFEMTEEQLGTLFSEAGPVTSAKIITDRQTGQPRGFGFVEMETKSEGRKAISML 64
Query: 69 QGYEINGRQLRVDFAE 84
G ++GR L V+ A+
Sbjct: 65 NGRTVDGRPLAVNEAK 80
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGN+P+ T++ L E+ + G + + DRETG P+G+ + ++ E++A +A + L
Sbjct: 619 VFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENATK-L 677
Query: 69 QGYEINGRQLRVDF 82
G ++ GRQ+RV++
Sbjct: 678 SGTDLEGRQIRVNY 691
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
+ + VF+GN+P+ T+E L +I G + + D E+GK KG+ F ++ DE++A A
Sbjct: 510 RSKSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKA 569
Query: 65 RRNLQGYEINGRQLRVDFA 83
G + GR LR++++
Sbjct: 570 -VGKNGEDCEGRDLRINYS 587
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L E G VV R++ D ETG+ +GYGF Y E
Sbjct: 205 TEHK-LFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDE 263
Query: 64 ARRNLQGYEINGRQLRVDFAENDK 87
A +L G E+ GR++RV+ A K
Sbjct: 264 ALSSLNGMEMEGREMRVNLALGKK 287
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS+ ++ GN+PY+ QL I +E ++ DR TG+ +G+ F +
Sbjct: 111 ASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDC 170
Query: 62 LSARRNLQGYEINGRQLRVDFAENDK 87
+NL G GR ++V+FA+ K
Sbjct: 171 ELVIKNLDGSLYGGRTMKVNFADRPK 196
>gi|170060753|ref|XP_001865940.1| RNA-binding motif protein [Culex quinquefasciatus]
gi|167879121|gb|EDS42504.1| RNA-binding motif protein [Culex quinquefasciatus]
Length = 137
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +P + TE L+ + + G +V+ LV DR+TGK KG+GF ++D+ + + NL
Sbjct: 36 IFVGGLPSELTEGDLLAVFSQYGEIVNINLVRDRKTGKSKGFGFICFEDQRSTVLTVDNL 95
Query: 69 QGYEINGRQLRVDFAENDKGA--DRNREQGR 97
G ++ GR LRVD + K D+ E+ R
Sbjct: 96 NGIKLLGRTLRVDHVSDYKPPKDDKADEETR 126
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +FVG + Y E L E + G V+ R+++DR+TG+ +G+GF + E
Sbjct: 37 MSSSK---LFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEE 93
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA + + G +++GR++RV++A
Sbjct: 94 AASALQAMDGQDLHGRRIRVNYA 116
>gi|359497129|ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 238
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TEEQ+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 11 IFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 70
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 71 NGLKMGDKTLTV 82
>gi|302795921|ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
gi|300152483|gb|EFJ19125.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
Length = 360
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 41/72 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRE+G KGYGFC Y+D A L
Sbjct: 152 IFVGGLPYYLTEPQIRELLESFGPLRGFDLVKDRESGNSKGYGFCVYQDPNVTDVACAAL 211
Query: 69 QGYEINGRQLRV 80
G ++ R L V
Sbjct: 212 NGLKMGDRTLTV 223
>gi|390352150|ref|XP_791635.3| PREDICTED: RNA-binding motif protein, X-linked 2-like
[Strongylocentrotus purpuratus]
Length = 232
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +P++ TE ++ + + G +V+ LV D++TGK KGY F Y+D+ + + A N
Sbjct: 64 IFIGGMPFELTEGDVLCVFSQYGEIVNINLVRDKKTGKSKGYCFIAYEDQRSTILAVDNF 123
Query: 69 QGYEINGRQLRVD 81
G ++ GR LRVD
Sbjct: 124 NGIKLKGRTLRVD 136
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F GN+ ++ + L E +E +V R+V DR+ G+ +G+G+ +++ E A A
Sbjct: 261 TLFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGGRSRGFGYVDFETPEAATKAYEA 320
Query: 68 LQGYEINGRQLRVDFAEN--------DKGADRNREQG 96
+QG+E++GR L +D+A D+ DR ++ G
Sbjct: 321 MQGFELDGRPLNLDYANTRPAESNPRDRATDRAKKHG 357
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
+ +F+GN+P+D +E + + EV V S RL D ++G KG+G+ + E A +
Sbjct: 363 ESETLFIGNLPFDTDQETVRQFFAEVAEVTSVRLPTDPDSGNLKGFGYVSFNSVEDAKTV 422
Query: 65 RRNLQGYEI-NG---RQLRVDFA 83
+ L G + NG R +R+DFA
Sbjct: 423 FQQLNGASLGNGRMSRSVRLDFA 445
>gi|302813365|ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
gi|300143770|gb|EFJ10458.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
Length = 353
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 41/72 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRE+G KGYGFC Y+D A L
Sbjct: 145 IFVGGLPYYLTEPQIRELLESFGPLRGFDLVKDRESGNSKGYGFCVYQDPNVTDVACAAL 204
Query: 69 QGYEINGRQLRV 80
G ++ R L V
Sbjct: 205 NGLKMGDRTLTV 216
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L + ++ G VV R++ D ETG+ +GYGF Y +E
Sbjct: 222 TEHK-LFVGNLSWTVTPEMLTDAFQQCGDVVGARVLYDGETGRSRGYGFVCYSTKEEMDQ 280
Query: 64 ARRNLQGYEINGRQLRVDFA 83
A L G EI GR++RV+ A
Sbjct: 281 AIETLNGTEIEGREIRVNLA 300
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ L I ++ ++ DR TG+ +G+ F E +NL
Sbjct: 135 LYFGNLPYNCDSALLAGIVQDHATPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKNL 194
Query: 69 QGYEINGRQLRVDFAENDK 87
G +GR +RV+ A+ K
Sbjct: 195 DGTLYSGRTMRVNMADKPK 213
>gi|393215896|gb|EJD01387.1| hypothetical protein FOMMEDRAFT_158528 [Fomitiporia mediterranea
MF3/22]
Length = 361
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G + +D TE +I I + G V+ L D+ETGK KG+GF Y+D+ + + A NL
Sbjct: 34 IFIGGLHFDLTEGDVITIFSQYGEVMDVNLPRDKETGKTKGFGFLMYEDQRSTILAVDNL 93
Query: 69 QGYEINGRQLRVDFAENDK 87
G ++ R LRVD N K
Sbjct: 94 NGAKVLERTLRVDHVRNYK 112
>gi|255073589|ref|XP_002500469.1| RNA binding protein [Micromonas sp. RCC299]
gi|226515732|gb|ACO61727.1| RNA binding protein [Micromonas sp. RCC299]
Length = 489
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
QHR +F+G +PY TE + E+ GP F+LV+DRETG KGYGF Y+D A
Sbjct: 257 QHR-LFIGGLPYFLTETMVKELVEAFGPTKQFQLVVDRETGNSKGYGFFVYQDHSVTDVA 315
Query: 65 RRNLQGYEINGRQLRV 80
+ L G ++ + L V
Sbjct: 316 CQGLHGMKMGEKSLTV 331
>gi|347964873|ref|XP_309173.5| AGAP000977-PA [Anopheles gambiae str. PEST]
gi|333466517|gb|EAA04971.6| AGAP000977-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PYD TE ++ + + G +V+ LV D+ TGK KG+ F Y+D+ + + A NL
Sbjct: 36 IFVGGLPYDLTEGDVLCVFSQYGEIVNVNLVRDKATGKSKGFAFICYEDQRSTVLAVDNL 95
Query: 69 QGYEINGRQLRVDFA-------ENDKGADRNRE-QGRGGPGMAAIVDPQKQLGGPAIHGE 120
G ++ G+ LRVD E DK D R+ G A P+KQ P + E
Sbjct: 96 NGIKLVGKTLRVDHVQDYRPPKETDKTDDETRQLYMEGCAPKAEHPRPEKQ-KDPTVKSE 154
Query: 121 SVH 123
H
Sbjct: 155 KRH 157
>gi|302816055|ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 185 IFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVACAAL 244
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 245 NGLKMGDKTLTV 256
>gi|356506096|ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
max]
Length = 483
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D E+ L E+C +G ++ RL+ DR+TG+ KGY F +K +E A A +
Sbjct: 108 VFIGGLPRDVCEDDLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKTKEVAQKAIEEI 167
Query: 69 QGYEINGRQLRVDFAE 84
E G+ LR +E
Sbjct: 168 HSKEFKGKTLRCSLSE 183
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
ASSQ + ++V NIP + T EQL E+ R G V + + GK + +GF Y + +A
Sbjct: 276 ASSQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKAGGK-RDFGFIHYAERSSA 334
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
L A ++ + YEI+G+ L V A+
Sbjct: 335 LKAVKDTEKYEIDGQMLEVVLAK 357
>gi|312379149|gb|EFR25518.1| hypothetical protein AND_09071 [Anopheles darlingi]
Length = 232
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PYD TE +I + + G +V+ LV D+ +GK KG+ F Y+D+ + + A NL
Sbjct: 96 IFVGGLPYDLTEGDVICVFSQYGEIVNINLVRDKTSGKSKGFCFICYEDQRSTVLAVDNL 155
Query: 69 QGYEINGRQLRVDFAEN 85
G ++ G+ LRVD ++
Sbjct: 156 NGIKLVGKTLRVDHVQD 172
>gi|302820212|ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 185 IFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVACAAL 244
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 245 NGLKMGDKTLTV 256
>gi|19113206|ref|NP_596414.1| nuclear cap-binding complex small subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698255|sp|Q9P383.1|NCBP2_SCHPO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|9453827|emb|CAB99394.1| nuclear cap-binding complex small subunit (predicted)
[Schizosaccharomyces pombe]
Length = 182
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A Q CV+VGN+ + TEEQ+ + + G + + +DR T P G+ F EY + + A
Sbjct: 27 AVKQSNCVYVGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGFCFVEYFENQDA 86
Query: 62 LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
L + + + ++ R +R D D G + R+ GRG G + D ++ P G +
Sbjct: 87 LDSLKYISRTSLDERIIRADL---DHGYEEGRQYGRGASG-GQVRDEMREEFDPGRGGYA 142
Query: 122 VHHQPIGLHIAITAAAVMTGALGAAQVGVQSN 153
+ QP + + + LG++ + +QSN
Sbjct: 143 KNRQPTSSRQLANYSGISSAPLGSS-LELQSN 173
>gi|168039508|ref|XP_001772239.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676409|gb|EDQ62892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG I D TEE L +C G V RL+ D++TG+ KGY F + +EE A A L
Sbjct: 127 IFVGGITRDTTEEDLRTLCSSCGDVYEVRLLKDKDTGQNKGYAFVTFLNEECAEKAIETL 186
Query: 69 QGYEINGRQLRV 80
E+ GR+LR
Sbjct: 187 NDSEVKGRKLRF 198
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVV-SFRLVIDRET-GKPKGYGFCEYKDEETA 61
S+HR +FVGNIP +E+L + E GP + S L+ D +T G+ +G+GF EY + A
Sbjct: 203 SKHR-LFVGNIPKTWEKEELESVLSEQGPGIQSVELLKDPKTPGRNRGFGFVEYYNHACA 261
Query: 62 LSARRNL 68
ARR +
Sbjct: 262 EHARREM 268
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A SQ + V+V N+P TEEQL ++ G +V L + + +GF + D A
Sbjct: 295 AMSQVKVVYVRNLPDSVTEEQLQKLFERHGEIVKVVLPATKPGQAKRDFGFVHFSDRAQA 354
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
L A + YE+ GR L A+
Sbjct: 355 LKAIEKTEVYELEGRILETSLAK 377
>gi|340387228|ref|XP_003392109.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Amphimedon queenslandica]
Length = 123
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G + YD TE ++ + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 32 IFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTGKSKGFCFIGYEDQRSTILAVDNF 91
Query: 69 QGYEINGRQLRVDFAEN 85
G ++ GR +RVD +N
Sbjct: 92 NGIKVCGRSIRVDHVQN 108
>gi|169626491|ref|XP_001806645.1| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
gi|160706106|gb|EAT76075.2| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
Length = 321
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ ++ +++ L ++ R++ V R+ IDR TG+P+G+ ++ D +A A+
Sbjct: 225 KTLFIGNMSFEMSDKDLNDLFRDIRNVNDVRVAIDRRTGQPRGFAHADFLDVASATKAKE 284
Query: 67 NLQGYEINGRQLRVDFA----ENDKGADRNREQG 96
L I GR+LRVDF+ EN +G R R+ G
Sbjct: 285 ILSAKTIYGRELRVDFSRSANENPRGNTR-RDSG 317
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
H +++GN+ Y+ T EQL ++ G V S ++V D G +G+G+ E+K + A +A
Sbjct: 128 HNTLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDNR-GMSRGFGYVEFKSIDDAQTAI 186
Query: 66 RNLQGYEINGRQLRVDFAENDKGADR 91
NL GR L V + +DR
Sbjct: 187 DNLDMQVFEGRNLVVQYHRAKSDSDR 212
>gi|342319853|gb|EGU11798.1| RNA-binding protein Cwf29 [Rhodotorula glutinis ATCC 204091]
Length = 300
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+ VG +PY+ TE +I I + G +V + D +TGKP+G+ + Y D+ + + A NL
Sbjct: 33 INVGGLPYNLTEGDVITIFSQYGEIVDINMPRDPQTGKPRGFAWLMYADQRSTVLAVDNL 92
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGR 97
G ++ GR LRVD N K +R++E G+
Sbjct: 93 NGAQVLGRTLRVDHVLNYKQLERDQESGK 121
>gi|426192446|gb|EKV42382.1| hypothetical protein AGABI2DRAFT_195726 [Agaricus bisporus var.
bisporus H97]
Length = 298
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG + YD +E +I I + G ++ L D+ETGK KG+GF Y+D+ + + A NL
Sbjct: 34 VFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNL 93
Query: 69 QGYEINGRQLRVDFAENDK 87
G ++ R LRVD N K
Sbjct: 94 NGAKVLERTLRVDHVRNYK 112
>gi|344301518|gb|EGW31830.1| hypothetical protein SPAPADRAFT_62445 [Spathaspora passalidarum
NRRL Y-27907]
Length = 393
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FVGN+ +D TE+ L E R G +V R+ +TGK KG+ F ++KDEE +A +
Sbjct: 227 RILFVGNLSFDTTEDNLQEHFRHCGDIVRIRMATFEDTGKCKGFAFIDFKDEEGPTTALK 286
Query: 67 NLQGYEINGRQLRVDFAEN 85
+ + R+LR+++ E+
Sbjct: 287 SKLAKMLINRKLRLEYGED 305
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+ ++ + L + E G V+ R++ DRE+G+ +G+GF Y + A NL
Sbjct: 185 VYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGTSDEVQKAVSNL 244
Query: 69 QGYEINGRQLRVDFAE 84
G +++GRQ+RV AE
Sbjct: 245 DGTDMDGRQIRVTVAE 260
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ VFVGN+P+ QL + + G V ++ D+ TG+ +G+GF E
Sbjct: 71 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 130
Query: 64 ARRNLQGYEINGRQLRVD 81
A L GY ++GR L+V+
Sbjct: 131 AVERLNGYVLDGRALKVN 148
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ + ATE+ + + E G V + RL + ETG+PKG+G+ E++D E A A
Sbjct: 107 TLFVGNLSWSATEDAVWGLFNEYG-VKNVRLPTEFETGRPKGFGYVEFEDIEGAKKAYEA 165
Query: 68 LQGYEINGRQLRVDFAE 84
L G E++GR +R+D+++
Sbjct: 166 LAGAELDGRNIRLDYSQ 182
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
++ VFVG +P+D ++L + + G + S +++DR+TG +G+G+ + E A A
Sbjct: 1 EYTSVFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKA 60
Query: 65 RRNLQGYEINGRQLRV 80
+ + GYE++GR +R
Sbjct: 61 KEEMDGYELDGRNIRT 76
>gi|219111683|ref|XP_002177593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410478|gb|EEC50407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 125
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
+Q V+VGN+ + TE +I + + G + LV + +TGK +G+ FC+Y+D + +
Sbjct: 31 AQSAWVYVGNLDHALTEGDVICVLSQYGEIEDLHLVREEDTGKSRGFAFCKYEDARSCVL 90
Query: 64 ARRNLQGYEINGRQLRVDFAEN 85
A N G E+ GR LRVD EN
Sbjct: 91 AVDNFTGIELCGRSLRVDHVEN 112
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +FVG + + E L E + G V+ R+++DR+TG+ +G+GF + E
Sbjct: 37 MSSSK---LFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEE 93
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA L G +++GRQ+RV++A
Sbjct: 94 AASALTALDGQDLHGRQIRVNYA 116
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ E+ L G +V R++ DRETG+ KG+G+ E+ + A A++ +
Sbjct: 223 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFANAADAAKAQKEM 282
Query: 69 QGYEINGRQLRVDFA 83
YE++GRQL VDF+
Sbjct: 283 HEYELDGRQLNVDFS 297
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ + E + E+ E G + L DR+TG KG+G+ ++ ++ A +A L
Sbjct: 325 LFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEAL 384
Query: 69 QGYEINGRQLRVDFA 83
G +I GR +R+D+A
Sbjct: 385 NGQDIGGRAIRIDYA 399
>gi|340383699|ref|XP_003390354.1| PREDICTED: RNA-binding protein 34-like [Amphimedon queenslandica]
Length = 305
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
H VFVGN+P+ EE+L ++ GP+ R++ D TG KG+ + ++KD + L A
Sbjct: 157 HCSVFVGNVPFGTDEEKLRKVFESCGPIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFAC 216
Query: 66 RNLQGYEINGRQLRVDFAENDK 87
+ + E+ GR+LR+ +DK
Sbjct: 217 KKNERIEVEGRKLRIFRCRSDK 238
>gi|307155022|ref|YP_003890406.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306985250|gb|ADN17131.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y+ E +L E+ E G V L DRETGK +G+GF E ++ A L
Sbjct: 3 IYVGNLHYEVEEGELREVFAEYGTVRRVYLPEDRETGKKRGFGFVEMSTDDEEDKAIETL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
G E GRQL+V+ A + +R+ +G GG
Sbjct: 63 DGAEWMGRQLKVNKARPRENDNRDSNRGSGG 93
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVGN+ + L E+ + G VV R+V DRE+G+ +G+GF Y D +A +L
Sbjct: 109 VFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDSL 168
Query: 69 QGYEINGRQLRVDFAEN 85
G E +GR+LRV+ A N
Sbjct: 169 DGAEFDGRELRVNLAGN 185
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GN+P+ QL IC+E G V ++ D+E+G+ +G+ F +E A + L
Sbjct: 2 LYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIERL 61
Query: 69 QGYEINGRQLRVDF 82
G+++ GR L+V F
Sbjct: 62 DGHDVGGRPLKVSF 75
>gi|449503141|ref|XP_004161854.1| PREDICTED: uncharacterized LOC101206596 [Cucumis sativus]
Length = 399
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 172 LAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
+A MS+NQL +IMS+MK + QN++QA+Q+L+ P L KALFQAQIMLGM P
Sbjct: 15 IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRP 67
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVG + YD +E +I I + G ++ L D+ETGK KG+GF Y+D+ + + A N
Sbjct: 33 YIFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDN 92
Query: 68 LQGYEINGRQLRVDFAENDK 87
L G ++ R LRVD N K
Sbjct: 93 LNGAKVLERTLRVDHVRNYK 112
>gi|402075524|gb|EJT70995.1| U2 snRNP component IST3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 378
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+ G + Y+ TE ++ I + G V +LV DRETGK KG+G+ +Y+D+ + A NL
Sbjct: 35 VYFGGLSYELTEGDVVTIFSQFGEPVFLKLVRDRETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
G EI GR +RVD A D + ++GR G
Sbjct: 95 GGAEIAGRLVRVDHARYKPHEDDDPDEGRIG 125
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +F+G + Y + L E + G V+ R+++DRETG+ +G+GF + E
Sbjct: 37 MSSSK---LFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEE 93
Query: 61 ALSARRNLQGYEINGRQLRVDFAEN 85
A SA + L G +++GR++RV++A +
Sbjct: 94 ASSAIQALDGQDLHGRRVRVNYATD 118
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P+ A +E +IE+ + G V + L ++R+TG+ +G+ F E DE T +A L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 69 QGYEINGRQLRVDFAE 84
QG E+ GR LR++ AE
Sbjct: 63 QGAELMGRPLRINKAE 78
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++G + YD E+ + E + G + L DRETG PKG+G+ E+ D + A +A +
Sbjct: 313 LYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEAM 372
Query: 69 QGYEINGRQLRVDFA 83
G E++GR++RVD++
Sbjct: 373 NGKELSGRRIRVDYS 387
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VG + ++ E L + G VV R++ D + K KG+GF +K E A A +
Sbjct: 214 VYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKA-VAM 272
Query: 69 QGYEINGRQLRVDFA 83
G+EI+GR +R DFA
Sbjct: 273 TGHEIDGRAIRCDFA 287
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
Length = 173
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P+ A +E +IE+ + G V + L ++R+TG+ +G+ F E DE T +A L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 69 QGYEINGRQLRVDFAE 84
QG E+ GR LR++ AE
Sbjct: 63 QGAELMGRPLRINKAE 78
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVGN+ + A+E+ L E G V R+ DRETG+PKG+ + ++ D E+A A
Sbjct: 401 TLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPKGFAYVDFTDIESAKKAHDE 460
Query: 68 LQGYEINGRQLRVDF 82
G +I GR +R+D+
Sbjct: 461 GAGMDIAGRAVRLDY 475
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVG + ++ + L E G VVS R+ +DR TGK +G+G+ E+ + A+ A
Sbjct: 301 TIFVGRLSWNVDNDWLKSEFEECGEVVSARVQMDRNTGKSRGFGYVEFTSPD-AVEAALK 359
Query: 68 LQGYEINGRQLRVD 81
L G EI+GR + VD
Sbjct: 360 LTGKEIDGRPINVD 373
>gi|358335067|dbj|GAA28104.2| RNA-binding motif protein X-linked 2 [Clonorchis sinensis]
Length = 314
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 2 ASSQHR------CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEY 55
ASS HR +F+G + ++ TE +I + + G VV+ LV D++TG KG+ F Y
Sbjct: 26 ASSWHRQYKDSAWIFIGGLNFELTEGDIICVFSQYGEVVNINLVRDKKTGISKGFAFLCY 85
Query: 56 KDEETALSARRNLQGYEINGRQLRVDFAENDK 87
+D+ + + A NL G ++ GR +RVD E K
Sbjct: 86 EDQRSTVLATDNLNGIKLAGRIIRVDHVEKYK 117
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ + ATEE+L + G V + +++DRETG+ +G+ F E D E A A NL
Sbjct: 68 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 127
Query: 69 QGYEINGRQLRVD 81
G+EI+GR + V+
Sbjct: 128 NGHEIDGRSVTVN 140
>gi|339247029|ref|XP_003375148.1| putative H(+)-transporting two-sector ATPase subunit F.a
[Trichinella spiralis]
gi|316971527|gb|EFV55285.1| putative H(+)-transporting two-sector ATPase subunit F.a
[Trichinella spiralis]
Length = 141
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 41 DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNRE 94
DRE GK KGYGFCE+KD ETALSA RN+ E +GR LR+D A ++ + ++
Sbjct: 3 DRENGKSKGYGFCEFKDHETALSALRNMNNVEFHGRPLRIDAAFGERSKEEIKQ 56
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GNI + A E + E G + RL D E+G+PKG+G+ ++ + A SA
Sbjct: 371 TLFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGRPKGFGYIQFSSVDEARSALNE 430
Query: 68 LQGYEINGRQLRVDFA 83
LQG E+ GR +R+DF+
Sbjct: 431 LQGSELAGRAMRLDFS 446
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ EE L G + R+V DR++G+ +G+G+ E+ + E A A
Sbjct: 267 LFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAFEAK 326
Query: 69 QGYEINGRQLRVDF--AENDKGADRNREQGR 97
+G E++GR L +D+ A + G ++R Q R
Sbjct: 327 KGAELDGRPLNLDYANARQNAGGAKDRSQAR 357
>gi|224125466|ref|XP_002329812.1| predicted protein [Populus trichocarpa]
gi|222870874|gb|EEF08005.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PY TE Q+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 69 VFVGGLPYYFTETQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 128
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQ 95
G ++ + L V G R+ ++
Sbjct: 129 NGLKMGDKTLTVRRGTESGGQSRSEQE 155
>gi|46580620|ref|YP_011428.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602071|ref|YP_966471.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387153909|ref|YP_005702845.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46450039|gb|AAS96688.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562300|gb|ABM28044.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311234353|gb|ADP87207.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 89
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ A+E+ + + G VVS +L++DRETG+P+G+GF E D + A +A
Sbjct: 3 KTLYVGNLPFSASEDDVRSLFTNYGEVVSVKLIMDRETGRPRGFGFVEMNDGD-AGAAIE 61
Query: 67 NLQGYEINGRQLRVDFAE 84
L G + GR LRV+ A+
Sbjct: 62 ALDGADFMGRALRVNEAQ 79
>gi|255648067|gb|ACU24489.1| unknown [Glycine max]
Length = 439
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D E+ L E+C +G ++ RL+ DR+TG+ KGY F +K +E A A +
Sbjct: 108 VFIGGLPRDVCEDDLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKAKEVAQKAIEEI 167
Query: 69 QGYEINGRQLRVDFAE 84
E G+ LR +E
Sbjct: 168 HSKEFKGKTLRCSLSE 183
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
ASSQ + ++V NIP + T EQL E+ R G V + + GK + +GF Y + +A
Sbjct: 276 ASSQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKAGGK-RDFGFIHYAERSSA 334
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
L A ++ + YEI+G+ L V A+
Sbjct: 335 LKAVKDTEKYEIDGQMLEVVLAK 357
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+++G++ + TE+Q+ E + G V S RL DR+TG PKG+G+ ++ + A +A +
Sbjct: 297 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKA 356
Query: 68 LQGYEINGRQLRVDFA 83
+ G EI GR +RVDFA
Sbjct: 357 MNGAEIAGRAIRVDFA 372
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG + ++ + L G VVS R+V DR++ K +G+G+ E+ D E++ A
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEK- 256
Query: 69 QGYEINGRQLRVDFA 83
G EI+GR +RV++A
Sbjct: 257 DGSEIDGRAIRVNYA 271
>gi|47221432|emb|CAF97350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G PY+ +E +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 37 VFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 96
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR LRVD ++
Sbjct: 97 NGIKIKGRTLRVDHVKD 113
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PYD TE L+ + + G VV LV D+ TGK KG+ F Y+D+ + + A NL
Sbjct: 38 VFVGGVPYDLTEGDLLAVFAQYGEVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNL 97
Query: 69 QGYEINGRQLRVD 81
G ++ GR +RVD
Sbjct: 98 NGAKVLGRIIRVD 110
>gi|167533285|ref|XP_001748322.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773134|gb|EDQ86777.1| predicted protein [Monosiga brevicollis MX1]
Length = 423
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S++ +FV N+ + A E + EI G S R+V DRETG KG+G+ E++D ++A
Sbjct: 316 SAESSTLFVKNLSFRADENSVWEI---FGDAKSVRIVTDRETGNSKGFGYVEFEDVDSAK 372
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A QG I GR++ +DFA
Sbjct: 373 TALNTNQGVSIAGREVFLDFA 393
>gi|58271546|ref|XP_572929.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115110|ref|XP_773853.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256481|gb|EAL19206.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229188|gb|AAW45622.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 373
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++VG +P++ TE LI I + G ++ LV D+ETGK +G+GF Y+D+ + + A N
Sbjct: 32 YIYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDN 91
Query: 68 LQGYEINGRQLRVDFAEN 85
+ G ++ GR L+VD N
Sbjct: 92 MNGTQVIGRTLKVDHTRN 109
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++ G +PYD TE +I I + G V +L D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 18 FIYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDN 77
Query: 68 LQGYEINGRQLRVDFA 83
L G +I+GR + VD A
Sbjct: 78 LGGADISGRMISVDHA 93
>gi|398411554|ref|XP_003857115.1| hypothetical protein MYCGRDRAFT_102763 [Zymoseptoria tritici
IPO323]
gi|339477000|gb|EGP92091.1| hypothetical protein MYCGRDRAFT_102763 [Zymoseptoria tritici
IPO323]
Length = 377
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 51/79 (64%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +F+GN+ Y ++ L ++ +EV V+ R+ IDR +G+P+G+ ++ D E+A A+
Sbjct: 286 KTLFIGNMSYQMSDRDLNDLFKEVRNVLDVRVAIDRRSGQPRGFAHADFIDMESAKKAKE 345
Query: 67 NLQGYEINGRQLRVDFAEN 85
L+ + GRQLR+D++ +
Sbjct: 346 LLEQKSVYGRQLRIDYSRD 364
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+ ++ T +L G VVS ++V D G KG+ F E+ D+E A A++
Sbjct: 188 KILYVGNLFFEVTAPKLEAAFGRFGEVVSSKVVTD-ARGLSKGFAFVEFSDQEAANRAKQ 246
Query: 67 NLQGYEINGRQLRVDF 82
L E GR+L V +
Sbjct: 247 ELNHTEFEGRRLSVQY 262
>gi|149921891|ref|ZP_01910335.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
gi|149817244|gb|EDM76721.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
Length = 189
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +P+ ++L E+ E G + R+++DRETG+ +G+GF Y DEE A A L
Sbjct: 1 MFVGGLPWAMDNQRLKEVFAEFGALEDARVILDRETGRSRGFGFVTYVDEEGATKA-LGL 59
Query: 69 QGYEINGRQLRVD 81
G E++GR++RVD
Sbjct: 60 DGQEVDGRRIRVD 72
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +F+G +P+ A ++ L + G V R+++DRETG+ +G+GF Y E
Sbjct: 33 MSSSK---LFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVEN 89
Query: 61 ALSARRNLQGYEINGRQLRVDFAE 84
A A + G + GR +RV FAE
Sbjct: 90 ASEALSAMDGQNLGGRTVRVSFAE 113
>gi|256087425|ref|XP_002579870.1| rna recognition motif containing protein [Schistosoma mansoni]
Length = 279
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 2 ASSQHR------CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEY 55
SS HR ++VG + YD TE +I + + G +V+ LV D++TG KG+ F Y
Sbjct: 47 VSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCY 106
Query: 56 KDEETALSARRNLQGYEINGRQLRVDFAE 84
+D+ + + A NL G ++ GR +RVD E
Sbjct: 107 EDQRSTVLATDNLNGIKLGGRIIRVDHVE 135
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
gi|222855233|gb|EEE92780.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
+ +++ ++VGN+PY T +L E+ E G V S ++ DR T + +G+GF E
Sbjct: 107 IKATEEGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEE 166
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQL 112
A A + G + GR +RV+F E +G +R R G +D + ++
Sbjct: 167 AKKAIQMFNGTQFGGRSVRVNFPEVPRGGEREVMGPRIQSGYKGFIDSEHKI 218
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+H+ ++ GN+ + T E L + V+S +++ +R++ + +G+GF ++ E A +
Sbjct: 214 SEHK-IYAGNLGWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEA 272
Query: 64 ARRNLQGYEINGRQLRVDFA 83
A + G E+ GR +R++ A
Sbjct: 273 ALEAMNGEEVEGRPMRLNLA 292
>gi|356573261|ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
max]
Length = 483
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D E+ L E+C +G ++ RL+ DR+TG+ KGY F +K +E A A +
Sbjct: 108 VFIGGLPRDVCEDDLRELCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEI 167
Query: 69 QGYEINGRQLRVDFAE 84
E G+ LR +E
Sbjct: 168 HSKEFKGKTLRCSLSE 183
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
ASSQ + ++V NIP + T EQL E+ R G V + + GK + +GF Y + +A
Sbjct: 276 ASSQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKAGGK-RDFGFIHYAERSSA 334
Query: 62 LSARRNLQGYEINGRQLRV 80
L A ++ + YEI+G+ L V
Sbjct: 335 LKAVKDTEKYEIDGQMLEV 353
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG++ ++ E L + G + + R+V DRE+G+ KG+G+ EY E A A +
Sbjct: 304 LFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKKALEEM 363
Query: 69 QGYEINGRQLRVDFA 83
+G +I+GR + VDF+
Sbjct: 364 KGKDIDGRTINVDFS 378
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICRE-VGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
S + VFV N+ ++A +EQ+++ E G +V R+ D E+G+PKG+ + +Y ++A
Sbjct: 398 SPESETVFVANLSFEA-DEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSA 456
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A + G + GR +R DF+
Sbjct: 457 RKAVEEMNGALVAGRAIRTDFS 478
>gi|241953799|ref|XP_002419621.1| RNA-binding protein, putative; nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223642961|emb|CAX43217.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 393
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FVGN+ +D TE+ L E + G +V R+ ++TGK KG+ F ++KDEE A +A +
Sbjct: 210 RILFVGNLSFDTTEDLLEEHFKHCGEIVKIRMATFQDTGKCKGFAFIDFKDEEGATTALK 269
Query: 67 NLQGYEINGRQLRVDFAEN 85
+ + R+LR+++ E+
Sbjct: 270 SKLTKMLINRKLRMEYGED 288
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+++G++ + TE+Q+ E + G V S RL DR+TG PKG+G+ ++ + A +A +
Sbjct: 294 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKA 353
Query: 68 LQGYEINGRQLRVDFA 83
+ G EI GR +RVDFA
Sbjct: 354 MNGAEIAGRAIRVDFA 369
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG + ++ + L G VVS R+V DR++ K +G+G+ E+ D E++ A
Sbjct: 195 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEK- 253
Query: 69 QGYEINGRQLRVDFA 83
G EI+GR +RV++A
Sbjct: 254 DGSEIDGRAIRVNYA 268
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YDATEE + +I VGPV S ++ DR+TG+PKG+ F E +++ A L
Sbjct: 3 LYVGNLSYDATEEDVRQIFEGVGPVSSVNMITDRDTGRPKGFAFVEMENKNDGDKAISEL 62
Query: 69 QGYEINGRQLRVDFA 83
++ GR ++V A
Sbjct: 63 NDVDVKGRSIKVSVA 77
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
+VGN+P+ A + +L+++ E G VV+ +V DRETG+ +G+GF +E SA L
Sbjct: 202 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 261
Query: 70 GYEINGRQLRVDFA 83
G E++GR LRV+ A
Sbjct: 262 GQEMDGRPLRVNVA 275
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+PYD E+L ++ + G V ++ ++E+G+ +G+GF E A A
Sbjct: 107 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGFGFVTMSTIEEADKAIETF 166
Query: 69 QGYEINGRQLRVDFA 83
Y I+GR L V+ A
Sbjct: 167 NRYNISGRLLNVNRA 181
>gi|443697654|gb|ELT98021.1| hypothetical protein CAPTEDRAFT_86725, partial [Capitella teleta]
Length = 156
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 53/87 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+ G +PYD TE ++ + + G +V+ L+ D+ TGK KG+ F Y+D+ + + A NL
Sbjct: 33 VYCGGLPYDLTEGDVVCVFSQYGEIVNVNLIRDKGTGKSKGFCFLCYEDQRSTILAVDNL 92
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQ 95
G++I GR +RVD ++ K + ++
Sbjct: 93 NGFKILGRTIRVDHVKDYKAPKEHGDE 119
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +FVG + + ++ L + G V +++ DRETG+ +G+GF + D E
Sbjct: 32 MSSSR---LFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEA 88
Query: 61 ALSARRNLQGYEINGRQLRVDFAE 84
A SA ++ G E+NGR +RV FA+
Sbjct: 89 AGSALSSMDGVELNGRSIRVSFAQ 112
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria
sulphuraria]
Length = 148
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ VFVG +P+ +EE L ++ + G VV R+VIDRETG+ +G+GF Y + +
Sbjct: 2 SEDNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDE 61
Query: 64 ARRNLQGYEINGRQLRVDFA 83
L G ++ GR +RV+ A
Sbjct: 62 CIAALDGQDLQGRTIRVNKA 81
>gi|428208904|ref|YP_007093257.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010825|gb|AFY89388.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 103
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T+E L ++ + G V +L IDRE+G+P+G+GF E + E+ +A L
Sbjct: 3 IYVGNLSYDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVEMETEDAEEAAISEL 62
Query: 69 QGYEINGRQLRVDFAE----------NDKGADRNREQGR 97
G GR L+V+ A+ N +G+ RE R
Sbjct: 63 DGARWMGRVLKVNKAKPREEGGSRTSNSRGSYNRRESSR 101
>gi|225679309|gb|EEH17593.1| nucleic acid-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 960
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +F+GN+ ++ ++ +L E+ +++ V R+ +DR TG+P+G+ ++ D E+A +A
Sbjct: 862 RTLFIGNLSFEMSDRELNELFKDIKNVTDVRVSVDRRTGQPRGFAHADFLDVESAQAAFE 921
Query: 67 NLQGYEINGRQLRVD--FAENDKGADRNREQGRG 98
L+ GR LR+D F+ D DR R+ G G
Sbjct: 922 ILKDKAPYGRPLRLDYSFSSRDNTVDRLRDVGSG 955
>gi|452852794|ref|YP_007494478.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
gi|451896448|emb|CCH49327.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
Length = 86
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGNIP+ A+E+ + ++ G V S +LV DRETG+ +G+GF E D + ALSA
Sbjct: 2 KSIYVGNIPFSASEDDVRDLFAAHGDVNSVKLVDDRETGRFRGFGFVEMDDRQ-ALSAIE 60
Query: 67 NLQGYEINGRQLRVDFAE 84
L G+++ GR L+V+ A+
Sbjct: 61 ALDGFDMGGRTLKVNEAK 78
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +F+GNI + A E + E E G ++ RL D E+G+PKG+G+ ++ + A
Sbjct: 358 ASPESDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEA 417
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
SA + L G ++ GR +R+DF+
Sbjct: 418 RSAFQTLNGADLGGRPMRLDFS 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
+ SS+ +FVGN+ ++ EE L E G + R+V DR++G+ +G+G+ E+ D
Sbjct: 253 VESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVDAAD 312
Query: 61 ALSARRNLQGYEINGRQLRVDFAE-NDKGADRNREQGR 97
A A + E++GR+L +DFA A R R Q R
Sbjct: 313 AAKAHAAKKDVELDGRKLNIDFANARSNAAPRERAQSR 350
>gi|168026451|ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682922|gb|EDQ69336.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 281 IFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVAIAAL 340
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 341 NGLKMGDKTLSV 352
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++ G +PY+ +E +I I + G V +LV D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FIYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFA 83
L G EI GR +RVD A
Sbjct: 94 LGGAEIGGRLIRVDHA 109
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + +F+GNI + A E + E E G ++ RL D E+G+PKG+G+ ++ + A
Sbjct: 360 ASPESDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEA 419
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
SA + L G ++ GR +R+DF+
Sbjct: 420 RSAFQTLNGADLGGRPMRLDFS 441
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
+ SS+ +FVGN+ ++ EE L E G + R+V DR++G+ +G+G+ E+ +
Sbjct: 255 VESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVNAAD 314
Query: 61 ALSARRNLQGYEINGRQLRVDFAE-NDKGADRNREQGR 97
A A + E++GR+L +DFA A R R Q R
Sbjct: 315 AAKAHAAKKDVELDGRKLNIDFANARSNAAPRERAQSR 352
>gi|162463757|ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays]
gi|168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding protein1 [Zea mays]
Length = 303
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ + +L+E+ E G VV R+V DRETG+ +G+GF ++ A L
Sbjct: 221 IYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRETGRSRGFGFVTMASQDELDDAIAAL 280
Query: 69 QGYEINGRQLRVDFAE 84
G ++GR LRV+ AE
Sbjct: 281 DGQSLDGRALRVNVAE 296
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+PYD E+L ++ + G V ++ +RET + +G+GF E A A
Sbjct: 127 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMF 186
Query: 69 QGYEINGRQLRVD 81
Y++NGR L V+
Sbjct: 187 HRYDVNGRLLTVN 199
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S++ +FVGN+P+ AT++ + EI E G V S RL D ET + KG+G+ E+ E+A
Sbjct: 455 SAESTTLFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFATLESAR 514
Query: 63 SA--RRNLQGYEINGRQLRVDFAE 84
+A + +G I+ RQ R+DF++
Sbjct: 515 AAVEKGRGEGVYIDNRQARLDFSQ 538
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ V+VG + ++ E L GP+V R++ DR+T K KG+G+ +++ E A A
Sbjct: 358 KNVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYIDFETCEGAQKAIE 417
Query: 67 NLQGYEINGRQLRVDFA 83
G E++GR L+VD +
Sbjct: 418 TKNGTELDGRTLKVDLS 434
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T++ L E+ E G V +L DRETG+P+G+GF E E A L
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEAL 62
Query: 69 QGYEINGRQLRVDFAE--NDKGADRNREQ----GRGG 99
G E GR ++V+ A+ D+G+ NR RGG
Sbjct: 63 DGAEWMGRDIKVNKAKPREDRGSGGNRRNSPNYSRGG 99
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG++ D ++ L ++ + ++ D +TG+ +GYGF + D+E A A +
Sbjct: 169 LFVGDLNIDIDDDTLSRSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEM 228
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGP 100
QG E+NGR +R+++A D N++Q GGP
Sbjct: 229 QGKELNGRPIRINWATK---RDNNQQQNHGGP 257
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
+ R ++VGN+ TE+ L + + G +V +++ID+++ Y F EY A
Sbjct: 76 TSDRVLYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSNY-VNYAFVEYAKAHDASV 134
Query: 64 ARRNLQGYEINGRQLRVDFA 83
A + L G +I +++++ A
Sbjct: 135 ALQTLNGIQIENNKVKINRA 154
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
++GNIP+ ATE LI + + SF ++D KG F +Y E A L
Sbjct: 342 YIGNIPHFATEADLIPLLQ------SFGFILDFTHYPEKGCCFIKYDTHEQAAVCIVALA 395
Query: 70 GYEINGRQLRVDFAENDKGADRN 92
+ GR LR + G +RN
Sbjct: 396 NFNFQGRNLRTGW-----GKERN 413
>gi|149195116|ref|ZP_01872208.1| hypothetical protein CMTB2_06431 [Caminibacter mediatlanticus
TB-2]
gi|149134829|gb|EDM23313.1| hypothetical protein CMTB2_06431 [Caminibacter mediatlanticus
TB-2]
Length = 83
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGNI YDA E+L E+ + G V+S +++ DRETG+ KG+GF E E A +A
Sbjct: 2 KTIYVGNINYDANAEELKELFSQYGEVLSAKIINDRETGRSKGFGFIEM--ESGAETAIE 59
Query: 67 NLQGYEINGRQLRVDFA 83
L G E GR+LRV+ A
Sbjct: 60 ELDGKEFLGRRLRVNEA 76
>gi|345566791|gb|EGX49733.1| hypothetical protein AOL_s00078g222 [Arthrobotrys oligospora ATCC
24927]
Length = 303
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +F+GN+ +D T++ L E+ V R+ IDR TG+P+G+ ++ D +A +A+
Sbjct: 205 RTLFIGNLSFDITDKDLNELFAGVRNCTDVRVAIDRRTGQPRGFAHADFVDIASAEAAKG 264
Query: 67 NLQGYEINGRQLRVDFAEN 85
L+ I GRQ+R+DF +
Sbjct: 265 QLETKSIYGRQIRIDFTKT 283
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGNI Y E L E G VVS ++V D G KG+G+ EY++++ A +A + +
Sbjct: 114 IYVGNISYGIRGEDLEREFGEFGKVVSAKVVYD-PRGLSKGFGYVEYEEQDAATAAVQKM 172
Query: 69 QGYEINGRQLRVDF 82
G ++GR++ V +
Sbjct: 173 HGLIVDGRRINVQY 186
>gi|38566951|emb|CAE76253.1| related to heterogeneous nuclear ribonucleoprotein HRP1 [Neurospora
crassa]
Length = 344
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
C+F+GNIPY+ T+ +L I + + R+ +DR TG P+G+ ++ D E A++A
Sbjct: 179 CLFIGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALEK 238
Query: 68 LQGYEINGRQLRVDFAE 84
LQG ++ R +++D+A+
Sbjct: 239 LQGTQLGERTIKIDYAQ 255
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
+++ FV NI +DATEE L + G V L D G KGYGF + E
Sbjct: 84 TTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLARD-PRGLSKGYGFVTFATREALE 142
Query: 63 SARRNLQGYEINGRQLRVD 81
A + G +GR++ V+
Sbjct: 143 EACSQVDGSFWHGRRISVE 161
>gi|449460375|ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Cucumis sativus]
Length = 395
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG IPYD TE L+ + + G +V L+ D+ TGK KGY F Y+D+ + A NL
Sbjct: 38 VFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNL 97
Query: 69 QGYEINGRQLRVD 81
G +I GR +RVD
Sbjct: 98 NGAQILGRIVRVD 110
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
+VGN+P+ A + +L+++ E G VV+ +V DRETG+ +G+GF +E SA L
Sbjct: 202 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 261
Query: 70 GYEINGRQLRVDFA 83
G E++GR LRV+ A
Sbjct: 262 GQEMDGRPLRVNVA 275
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+PYD E+L ++ + G V ++ +RE+G+ +G+GF E A A
Sbjct: 107 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 166
Query: 69 QGYEINGRQLRVDFA 83
Y+I+GR L V+ A
Sbjct: 167 NRYDISGRLLNVNRA 181
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +F+G + Y + L E + G V+ R+++DRETG+ +G+GF + E
Sbjct: 37 MSSSK---LFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEE 93
Query: 61 ALSARRNLQGYEINGRQLRVDFAEN 85
A SA + L G +++GR++RV++A +
Sbjct: 94 ASSAIQALDGQDLHGRRVRVNYATD 118
>gi|126324409|ref|XP_001377779.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 198
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PY+ TE +I + + G +V+ LV D++T K KG+ F Y+D+ + + A N
Sbjct: 38 VFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTRKSKGFCFLCYEDQRSTILAVDNF 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGIKIRGRTIRVDHVAN 114
>gi|218197897|gb|EEC80324.1| hypothetical protein OsI_22371 [Oryza sativa Indica Group]
Length = 153
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 1 MASSQHRC---VFVGNIPYDATEEQLIEICREVGPVVSFRLV-IDRETGKPKGYGFCEYK 56
MA RC V+VGNI + ATE +L + C +GPV S RL +D T K KGY F EY
Sbjct: 1 MADVNCRCSRVVYVGNIAFHATEAELRDACELIGPVRSLRLAALDPATNKRKGYAFVEYA 60
Query: 57 DEETALSARRNLQ 69
D+ETA SA RNL
Sbjct: 61 DDETARSALRNLH 73
>gi|159474400|ref|XP_001695313.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158275796|gb|EDP01571.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 133
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F G + YD TE L+ + + G VV L+ D+++GK KG+ F Y+D+ + + A N
Sbjct: 38 IFAGGLDYDLTEGDLLAVFAQFGEVVDLNLIRDKDSGKSKGFAFVAYEDQRSTVLATDNF 97
Query: 69 QGYEINGRQLRVDFAENDK 87
G ++ GR +RV+ +N K
Sbjct: 98 NGAKVAGRTIRVEHVDNYK 116
>gi|156600447|gb|ABU86408.1| cleavage stimulation factor, partial [Clonorchis sinensis]
Length = 260
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
VF+GN+P+D EE++ + GP+ + RL+ D+ETG KG+GF +Y D A R+
Sbjct: 68 SVFLGNLPFDVQEEEVRSAMSKFGPIANVRLIRDKETGAVKGFGFVQYTDPAAISLAIRS 127
Query: 68 LQGYEINGRQLRV 80
+ + GR +R+
Sbjct: 128 SESVSVRGRPIRI 140
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 7 RC----VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
RC +FVG + Y + L ++ G V+ R++IDR+TGK KGYGF Y E A
Sbjct: 27 RCMSSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAA 86
Query: 63 SARRNLQGYEINGRQLRVDFAEN 85
+A + G ++ GR +RV A +
Sbjct: 87 AAVTAMDGKDLQGRIVRVSTAND 109
>gi|359463045|ref|ZP_09251608.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 90
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD TE+ L + E G V S +L DRETG+ +G+GF E D+ A L
Sbjct: 3 IYVGNLSYDVTEKDLSTVFAEYGTVKSAKLPTDRETGRIRGFGFVEMGDDTEEAKAIDEL 62
Query: 69 QGYEINGRQLRVDFAE--NDKGADRNR 93
+G E GR L+V+ A+ ++G NR
Sbjct: 63 EGAEWMGRTLKVNKAKPRENRGGGGNR 89
>gi|255578218|ref|XP_002529977.1| nucleolar phosphoprotein, putative [Ricinus communis]
gi|223530539|gb|EEF32420.1| nucleolar phosphoprotein, putative [Ricinus communis]
Length = 557
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P DA E+ L ++C +G + RL+ D++TG+ KG+ F ++ +E A A +
Sbjct: 111 VFIGGLPKDALEDDLRDLCEPIGDIFEIRLMKDKDTGESKGFAFVAFRSKEVAQKAIEEI 170
Query: 69 QGYEINGRQLRVDFAE 84
E G+ LR +E
Sbjct: 171 HSKEFKGKTLRCSLSE 186
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+ + E + E+ G + RL D ETG+PKGYG+ E+ + A
Sbjct: 333 SPESNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGRPKGYGYVEFSSVDEAR 392
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A +LQG +I GR +R+DF+
Sbjct: 393 QALNDLQGTDIGGRAIRLDFS 413
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ EE L E G + R++ +RE+G+ +G+G+ EY D +A +A
Sbjct: 233 LFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERESGRSRGFGYVEYADASSAKAAYEAK 292
Query: 69 QGYEINGRQLRVDFAE 84
+ EI+GR + +D+A+
Sbjct: 293 KDAEIDGRTINLDYAK 308
>gi|356498939|ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 235
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG IP+D TE L+ + + G VV LV D+ TGK KG+ F Y+D+ + A NL
Sbjct: 38 VFVGGIPFDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNL 97
Query: 69 QGYEINGRQLRVD 81
G ++ GR +RVD
Sbjct: 98 NGAQVLGRIIRVD 110
>gi|312283343|dbj|BAJ34537.1| unnamed protein product [Thellungiella halophila]
Length = 383
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
L L M+++QL +IMS+MK + QN +QAR++L+ PPL K LFQAQIMLGM P
Sbjct: 12 LPADLTGMTKSQLYDIMSQMKALIDQNYQQAREILIQNPPLTKTLFQAQIMLGMVQP 68
>gi|224068117|ref|XP_002302667.1| predicted protein [Populus trichocarpa]
gi|222844393|gb|EEE81940.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D E++L ++C +G + RL+ D++TG+ KG+ F +K +E A A L
Sbjct: 77 VFIGGLPKDVIEDELRDLCETIGEIFEIRLMKDKDTGESKGFAFVAFKSKEVARKATEEL 136
Query: 69 QGYEINGRQLRVDFAE 84
+ + G+ LR +E
Sbjct: 137 RSKDYKGKTLRCSISE 152
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+P+ A E + + V V S R+ D+E+G+PKG+ + + E A
Sbjct: 280 SPESDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAK 339
Query: 63 SARRNLQGYEINGRQLRVDFAE 84
+A L G ++NGR +R+D+A+
Sbjct: 340 NAFEQLNGSDLNGRPVRLDYAK 361
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++VGN+ + + L+ + S R+V DRE+G+ +G+G+ ++ E A A
Sbjct: 181 TLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQKAYDA 240
Query: 68 LQGYEINGRQLRVDFAENDKG 88
G + GR++R+DFA D G
Sbjct: 241 KSGALLEGREMRLDFAAKDAG 261
>gi|317050313|ref|YP_004111429.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
gi|316945397|gb|ADU64873.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
Length = 83
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEY--KDEETALSA 64
+ ++ GN+P+ TE++L + + G V S +L+ DRETG+ +G+GF E KD E A+ A
Sbjct: 3 KSIYAGNLPFTTTEDELGNLFAQYGDVYSVKLISDRETGRLRGFGFVEMEEKDCEAAVEA 62
Query: 65 RRNLQGYEINGRQLRVDFA 83
L G+E GR+LRV+ A
Sbjct: 63 ---LNGFEFGGRKLRVNEA 78
>gi|260892116|ref|YP_003238213.1| RNP-1 like RNA-binding protein [Ammonifex degensii KC4]
gi|260864257|gb|ACX51363.1| RNP-1 like RNA-binding protein [Ammonifex degensii KC4]
Length = 87
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R ++VGN+P+ E+L EI G V+S R+++DR+TG+ +G+GF E +DE+ A + R
Sbjct: 3 RTLYVGNLPWSTQAEELAEIFSAYGEVLSSRIIVDRQTGRSRGFGFVEVRDED-AEAMIR 61
Query: 67 NLQGYEINGRQLRVDFAENDKGADR 91
L G E GR L V+ A + R
Sbjct: 62 ALNGAEYGGRVLVVNEARERQSRPR 86
>gi|222635313|gb|EEE65445.1| hypothetical protein OsJ_20807 [Oryza sativa Japonica Group]
Length = 153
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 1 MASSQHRC---VFVGNIPYDATEEQLIEICREVGPVVSFRLV-IDRETGKPKGYGFCEYK 56
MA RC V+VGNI + ATE +L + C +GPV S RL +D T K KGY F EY
Sbjct: 1 MADVNCRCSRVVYVGNIAFHATEAELRDACELIGPVRSLRLAALDPATNKRKGYAFVEYA 60
Query: 57 DEETALSARRNLQ 69
D+ETA SA RNL
Sbjct: 61 DDETARSALRNLH 73
>gi|110638796|ref|YP_679005.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281477|gb|ABG59663.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 143
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG++P+ E +L E E G V S +++ D+ TG+ KG+GF E D+ A A L
Sbjct: 3 IFVGSLPFSLEENELREFFEEYGEVSSVKIISDKFTGRSKGFGFVEMPDDAAAQKAIDEL 62
Query: 69 QGYEINGRQLRVDFAENDKGADR 91
G E+NGR + V+ +E K R
Sbjct: 63 NGAEVNGRTIVVNKSEEKKDGPR 85
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
+VGN+P+ A + +L+++ E G VV+ +V DRETG+ +G+GF +E SA L
Sbjct: 202 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 261
Query: 70 GYEINGRQLRVDFA 83
G E++GR LRV+ A
Sbjct: 262 GQEMDGRPLRVNVA 275
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+PYD E+L ++ + G V ++ +RE+G+ +G+GF E A A
Sbjct: 107 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 166
Query: 69 QGYEINGRQLRVDFA 83
Y+I+GR L V+ A
Sbjct: 167 NRYDISGRLLNVNRA 181
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+ + L + E G V+ R+V DRE+G+ +G+GF Y E +A NL
Sbjct: 179 VYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENAISNL 238
Query: 69 QGYEINGRQLRVDFAEN 85
G +++GRQ+RV AE+
Sbjct: 239 DGSDLDGRQIRVTVAES 255
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ VFVGN+P+ QL + + G V ++ D+ TG+ +G+GF + +
Sbjct: 80 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVEA 139
Query: 64 ARRNLQGYEINGRQLRVD 81
A GY ++GR LRV+
Sbjct: 140 AVEQFNGYVLDGRSLRVN 157
>gi|307719265|ref|YP_003874797.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|386347364|ref|YP_006045613.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|306532990|gb|ADN02524.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|339412331|gb|AEJ61896.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 101
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+ Y TE+ L ++ + G V S +++ DR++G KG+GF E EE +A L
Sbjct: 5 IYAGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISAL 64
Query: 69 QGYEINGRQLRVDFA-----ENDKGADRNR 93
+E++GRQLRV+ A + G DR+R
Sbjct: 65 NQHEVDGRQLRVNKAHERGGRSSFGGDRSR 94
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S+Q+ +FVGN+P+ A +E + E+ + G VV+ L ++R+TG+ +G+ F E D+
Sbjct: 27 STQNVSIFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEE 86
Query: 63 SARRNLQGYEINGRQLRVDFAE 84
+A LQG E+ GR LR++ AE
Sbjct: 87 AAIEGLQGAELMGRPLRINKAE 108
>gi|453088735|gb|EMF16775.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 761
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 3 SSQHRC-VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
++Q RC +FV ++P T +QL E+ + PV VID ET KGYGF + D E A
Sbjct: 47 ATQKRCSLFVRSLPASTTNDQLTELFSDAFPVKHATAVIDPETKLCKGYGFVTFADAEDA 106
Query: 62 LSARRNLQGYEINGRQLRVDFAE----NDKGADRNRE 94
A+ G+E+ G++LR++ AE + K D +E
Sbjct: 107 AQAKAQFNGHELGGKKLRIEVAEPRSRDSKAKDEGKE 143
>gi|297736736|emb|CBI25913.3| unnamed protein product [Vitis vinifera]
Length = 6467
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 47/86 (54%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TEEQ+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 6240 IFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 6299
Query: 69 QGYEINGRQLRVDFAENDKGADRNRE 94
G ++ + L V A G ++ +
Sbjct: 6300 NGLKMGDKTLTVRRATVGSGQAKSEQ 6325
>gi|224104290|ref|XP_002313385.1| predicted protein [Populus trichocarpa]
gi|222849793|gb|EEE87340.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG IP+D TE L+ + + G VV LV D+ TGK KG+ F Y+D+ + A NL
Sbjct: 38 VFVGGIPFDLTEGDLLAVFAQYGEVVDANLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNL 97
Query: 69 QGYEINGRQLRVD 81
G ++ GR +RVD
Sbjct: 98 NGAQVLGRIIRVD 110
>gi|22330606|ref|NP_177525.2| hydroxyproline-rich glycoprotein-like protein [Arabidopsis
thaliana]
gi|17979388|gb|AAL49919.1| putative proline-rich protein precursor [Arabidopsis thaliana]
gi|20465539|gb|AAM20252.1| putative proline-rich protein precursor [Arabidopsis thaliana]
gi|332197394|gb|AEE35515.1| hydroxyproline-rich glycoprotein-like protein [Arabidopsis
thaliana]
Length = 388
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
L +LA M+++QL +IMS+MK + QN +QAR++L+ P L KALFQAQIMLGM P
Sbjct: 12 LPANLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTKALFQAQIMLGMVQP 68
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 505 ISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
IS ++E ALLQQV+SLTPEQ+N LPPEQR QV+QLQQ L
Sbjct: 348 ISAEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQIL 386
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FV + YDATE++L E GPV RLV +++GKP+GY F E++ + +A +
Sbjct: 153 KTLFVARVSYDATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYAFVEFEHKNDMKTAYK 212
Query: 67 NLQGYEINGRQLRVD 81
G +I GR++ VD
Sbjct: 213 MADGRKIEGRRVVVD 227
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ + TE+ + + G V S RL DRETG+PKG+G+ E++D + A A
Sbjct: 101 LFVGNLSFGVTEDTVWSFFNDYG-VKSVRLPTDRETGRPKGFGYVEFEDIDGAKKAFEAA 159
Query: 69 QGYEINGRQLRVDFAE 84
G EI GR +R+D+++
Sbjct: 160 NGSEIEGRSIRLDYSQ 175
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG + + ++L + + G + S + +DR TGK +G+G+ + + A+ +
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPD-AVEKALQM 59
Query: 69 QGYEINGRQLRVD 81
G EI+GR ++VD
Sbjct: 60 NGQEIDGRAIKVD 72
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G + + + +L E G V R++ DRETG+ +G+GF Y D + A A +
Sbjct: 39 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 98
Query: 69 QGYEINGRQLRVDFA 83
G EI+GRQ+RV+ A
Sbjct: 99 DGKEIDGRQVRVNMA 113
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S R ++VGN+ ++ TE+QL ++ GPV +L D ETG+ KGYGF +Y E A
Sbjct: 68 SGGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLEDAR 127
Query: 63 SARRNLQGYEINGRQLRV 80
+A++NL G E+ GR ++V
Sbjct: 128 AAQQNLNGLELAGRPIKV 145
>gi|360044342|emb|CCD81889.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 258
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 2 ASSQHR------CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEY 55
SS HR ++VG + YD TE +I + + G +V+ LV D++TG KG+ F Y
Sbjct: 26 VSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCY 85
Query: 56 KDEETALSARRNLQGYEINGRQLRVDFAE 84
+D+ + + A NL G ++ GR +RVD E
Sbjct: 86 EDQRSTVLATDNLNGIKLGGRIIRVDHVE 114
>gi|344276873|ref|XP_003410230.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 303
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ TE ++ + + G +V+ LV +R+TGK KG+ F Y+D+ + + A N
Sbjct: 38 IFLGGLPYELTEGDILCVFSQYGEIVNINLVRNRKTGKSKGFCFICYEDQRSTVLAVDNF 97
Query: 69 QGYEINGRQLRVD 81
G +I GR +RVD
Sbjct: 98 NGIKIKGRTIRVD 110
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PY T +L E+ E G V S +V DR T + +G+ F E A A R
Sbjct: 110 LYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRMF 169
Query: 69 QGYEINGRQLRVDFAENDKGADR 91
G ++ GR ++V+F E KG +R
Sbjct: 170 DGSQVGGRTVKVNFPEVPKGGER 192
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
S H+ ++ GN+ + T + L E E V+S +++ +R++G+ +G+GF ++ E+
Sbjct: 206 FVDSPHK-IYAGNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAES 264
Query: 61 ALSARRNLQGYEINGRQLRVDFAE 84
A +A + G E+ GR LR++ AE
Sbjct: 265 ARAALDIMNGVEVQGRPLRLNLAE 288
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+ ++ + L + RE G V+ ++V DR++G+ KG+GF Y E A +L
Sbjct: 204 VYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTYSSAEEVEDAVDSL 263
Query: 69 QGYEINGRQLRVDFAE 84
G E++GR +RV AE
Sbjct: 264 NGAELDGRAIRVSVAE 279
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P++ QL ++ + G V + D+ TG+ +G+GF E +A +
Sbjct: 93 LFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQF 152
Query: 69 QGYEINGRQLRVD 81
GYE++GR LRV+
Sbjct: 153 NGYELDGRPLRVN 165
>gi|407940456|ref|YP_006856097.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407898250|gb|AFU47459.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 116
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PY T+ L E G V S ++++DRETG+ KG+GF E + E A +A R L
Sbjct: 5 IYVGNLPYSVTDATLESNFAEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAIRAL 64
Query: 69 QGYEINGRQLRVDFA 83
G ++GR + V+ A
Sbjct: 65 HGMSVDGRSIVVNLA 79
>gi|303326560|ref|ZP_07357003.1| RNA-binding protein [Desulfovibrio sp. 3_1_syn3]
gi|345893773|ref|ZP_08844565.1| hypothetical protein HMPREF1022_03225 [Desulfovibrio sp.
6_1_46AFAA]
gi|302864476|gb|EFL87407.1| RNA-binding protein [Desulfovibrio sp. 3_1_syn3]
gi|345045809|gb|EGW49708.1| hypothetical protein HMPREF1022_03225 [Desulfovibrio sp.
6_1_46AFAA]
Length = 88
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ A EEQ+ ++ E G V+S +LV DRETG+ +G+GF E +D E A +A
Sbjct: 3 KSIYVGNLPWSANEEQVQDLFAEYGNVLSVKLVSDRETGRARGFGFVEMEDGE-ADAAIE 61
Query: 67 NLQGYEINGRQLRVDFAE 84
L + GR LRV+ A+
Sbjct: 62 ALDNFSFGGRTLRVNEAK 79
>gi|452822647|gb|EME29664.1| RNA-binding protein [Galdieria sulphuraria]
Length = 187
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S +FVGN+P++ TE L+ + + G + LV D++TGK KG+ F Y+D+ + +
Sbjct: 32 SHSSYIFVGNLPFELTEGDLLVVFEQYGHIADVHLVRDQDTGKSKGFAFIGYEDQRSTIL 91
Query: 64 ARRNLQGYEINGRQLRVD 81
A N G + GR LRVD
Sbjct: 92 AVDNFNGTVLLGRTLRVD 109
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ + +L+E+ E G VV R+V DR+TG+ +G+GF +E A L
Sbjct: 212 IYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAAL 271
Query: 69 QGYEINGRQLRVDFAEN 85
G + GR LRV+ AE
Sbjct: 272 DGQSLEGRALRVNVAEE 288
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+PYD E+L ++ + G V ++ +RET + +G+GF E A A
Sbjct: 118 VYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEMF 177
Query: 69 QGYEINGRQLRVD 81
Y++NGR L V+
Sbjct: 178 HRYDVNGRLLTVN 190
>gi|255711606|ref|XP_002552086.1| KLTH0B06886p [Lachancea thermotolerans]
gi|238933464|emb|CAR21648.1| KLTH0B06886p [Lachancea thermotolerans CBS 6340]
Length = 396
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +FVGN+ +D T+E L + + G +V R+ ++TGK KG+ F ++K+EE +A +
Sbjct: 235 RILFVGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDTGKCKGFAFVDFKNEEGPTNALK 294
Query: 67 NLQGYEINGRQLRVDFAENDKGADRNREQ 95
+ I GR LR++F G DR++ Q
Sbjct: 295 DKTCRRIAGRPLRMEF-----GEDRSKRQ 318
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ +DA E + E E G VV+ RL D+ETG PKG+G+ + E A +A
Sbjct: 371 TLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDA 430
Query: 68 LQGYEINGRQLRVDFA 83
+ G +I GR +R+D+A
Sbjct: 431 MMGADIAGRPVRLDYA 446
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FVGN+ ++ +E L E G + R++ D+ TG+ KG+G+ E+ A +A
Sbjct: 266 KNLFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVKSSDAAAALA 325
Query: 67 NLQGYEINGRQLRVDFAE-NDKGADRNREQGR 97
+G I+GR+ VDF+ D A R R R
Sbjct: 326 AKKGALIDGREANVDFSTPRDTTAPRERANNR 357
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G + D TE +I I + G ++ L D+ TGK +G+GF Y+D+ + + A NL
Sbjct: 34 VFIGGLHVDMTEGDVITIFSQYGEIMDVNLPRDKTTGKQRGFGFLMYEDQRSTVLAVDNL 93
Query: 69 QGYEINGRQLRVDFAENDK 87
G ++ GR LRVD +N K
Sbjct: 94 NGAQVLGRTLRVDHVQNYK 112
>gi|406697962|gb|EKD01211.1| hypothetical protein A1Q2_04534 [Trichosporon asahii var. asahii
CBS 8904]
Length = 331
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A+ R VFV NIPYD +EEQ+ + EVGPV + L +E + + TA
Sbjct: 5 ATQVSRTVFVANIPYDVSEEQIASVFSEVGPVANVDLTRRQERARDTPL----FSSMATA 60
Query: 62 LSARRNLQGYEINGRQLRVDFAEND 86
SA RNLQ INGR +R++ + +D
Sbjct: 61 HSAVRNLQDVPINGRPVRIELSTDD 85
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 165 NDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
D ++ LA+++ ++ +M++MK + T EQARQLL +P L ALFQA ++L + P
Sbjct: 130 TDAISKTLAEVNPGEMQRVMADMKALVTAQPEQARQLLADRPQLAYALFQAMLLLNIVDP 189
Query: 225 QVLQM--PILRQGPGHPAQPLF 244
VLQ P+ Q PG+P P +
Sbjct: 190 SVLQRIQPLPGQNPGNPTAPAW 211
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S R ++VGN+ ++ TE+QL ++ GPV +L D ETG+ KGYGF +Y E A
Sbjct: 68 SGGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLEDAR 127
Query: 63 SARRNLQGYEINGRQLRV 80
+A++NL G E+ GR ++V
Sbjct: 128 AAQQNLNGLELAGRPIKV 145
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P+ A +E ++E+ G V + L ++R+TG+ +G+ F E DE SA +L
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 69 QGYEINGRQLRVDFAE 84
QG E+ GR LR++ AE
Sbjct: 63 QGAELMGRPLRINKAE 78
>gi|406886422|gb|EKD33455.1| hypothetical protein ACD_76C00026G0004 [uncultured bacterium]
Length = 83
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGNI +DAT+ L ++ EVG VVS ++V+D+ TG+ +G+GF E +E A +A + L
Sbjct: 5 LFVGNISWDATDSDLSKLFAEVGEVVSAQIVMDKLTGRSRGFGFVEMATDELAEAAIKAL 64
Query: 69 QGYEINGRQLRVDFA 83
G + GR + V+ A
Sbjct: 65 DGKDFLGRPITVNVA 79
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P+ A +E ++E+ G V + L ++R+TG+ +G+ F E DE SA +L
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 69 QGYEINGRQLRVDFAE 84
QG E+ GR LR++ AE
Sbjct: 63 QGAELMGRPLRINKAE 78
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ + +L+++ E G VV R+V DRETG+ +G+GF +E A L
Sbjct: 239 IYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAAL 298
Query: 69 QGYEINGRQLRVDFAEN 85
G ++GR LRV+ AE
Sbjct: 299 DGQSLDGRALRVNVAEE 315
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+PYD E+L ++ + G V ++ +RET + +G+GF E A A
Sbjct: 145 VYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 204
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIV 106
Y+++GR L V+ A +GA R + GP V
Sbjct: 205 HRYDVDGRLLTVNKAAP-RGARVERPPRQFGPSFRIYV 241
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++ G +PY+ +E +I I + G V +L D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FIYFGGLPYELSEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFA 83
L G EI GR +RVD A
Sbjct: 94 LSGAEIGGRLIRVDHA 109
>gi|224121298|ref|XP_002318548.1| predicted protein [Populus trichocarpa]
gi|222859221|gb|EEE96768.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMA-TPQV 226
L +LA M++NQL +IM +MK + QNK+QA+++L+ P L KALFQAQIMLGM PQ
Sbjct: 11 LPANLAGMTKNQLYDIMFQMKTLIEQNKQQAKEILIQNPLLTKALFQAQIMLGMVQPPQA 70
Query: 227 LQ--MPILRQGPGHPAQPLFQDGQQQVAQLPG 256
+ P Q P AQP Q Q LPG
Sbjct: 71 IPNIQPAASQQPQLSAQPSRQSNIQAAQTLPG 102
>gi|297735185|emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 181 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 240
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 241 NGIKMGDKTLTV 252
>gi|325290560|ref|YP_004266741.1| RNP-1 like RNA-binding protein [Syntrophobotulus glycolicus DSM
8271]
gi|324965961|gb|ADY56740.1| RNP-1 like RNA-binding protein [Syntrophobotulus glycolicus DSM
8271]
Length = 84
Score = 65.5 bits (158), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+P+ + E+L E E G V+ R++ DRETG+ +G+GF E DE+ A
Sbjct: 3 KTLYVGNLPWATSSEELTEYFAEFGNVIGSRIITDRETGRSRGFGFVEVADEDAERLAEE 62
Query: 67 NLQGYEINGRQLRVDFA 83
L G + NGR L V+ A
Sbjct: 63 -LNGKDFNGRSLTVNEA 78
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F GN+ ++ EE L E G +V R+V DRE+G+ +G+G+ E+ + E A+ A
Sbjct: 240 LFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRESGRSRGFGYVEFANVEDAVKAHAAK 299
Query: 69 QGYEINGRQLRVDF 82
+ E++GR+L +DF
Sbjct: 300 KDVELDGRKLNLDF 313
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +F+GNI + A E + E+ + G + RL D E+G+PKG+G+ ++ + A
Sbjct: 340 SPESDTLFIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQFSSVDEAR 399
Query: 63 SARRNLQGYEINGRQLRVDFA 83
+A G ++ GR +R+D++
Sbjct: 400 AAMEAEHGADLGGRSIRLDYS 420
>gi|171683191|ref|XP_001906538.1| hypothetical protein [Podospora anserina S mat+]
gi|170941555|emb|CAP67207.1| unnamed protein product [Podospora anserina S mat+]
Length = 398
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+ G +PY+ TE +I I + G +LV D+ETGK KG+G+ +Y+D+ + A NL
Sbjct: 57 VYFGGLPYELTEGDVITIFSQYGEPTFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 116
Query: 69 QGYEINGRQLRVDFA 83
G EI GR +RVD A
Sbjct: 117 GGAEIAGRLIRVDHA 131
>gi|427418082|ref|ZP_18908265.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760795|gb|EKV01648.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 65.5 bits (158), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+ YDAT+E + ++ E G V S L DRETG+P+G+ F E + + +A L
Sbjct: 3 VYVGNLSYDATKEDVTDVFAEYGTVKSAHLPTDRETGRPRGFAFVEMETDAEETAAIEAL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
G E GR L+V +K R G GG
Sbjct: 63 DGAEWMGRVLKV-----NKAKPREPRGGSGG 88
>gi|320103893|ref|YP_004179484.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
gi|319751175|gb|ADV62935.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
Length = 104
Score = 65.5 bits (158), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+PYD TE+QLI++ E G VVS +++IDRET + +G+GF E + A A L
Sbjct: 3 LYVGNLPYDTTEDQLIDVFSEYGEVVSAQIMIDRETNRSRGFGFIEMR--TGAQEAIEAL 60
Query: 69 QGYEINGRQLRVDFA 83
G + +GR L V+ A
Sbjct: 61 NGQDFHGRSLTVNEA 75
>gi|224077136|ref|XP_002305148.1| predicted protein [Populus trichocarpa]
gi|222848112|gb|EEE85659.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PY TE Q+ E+ GP+ F LV DR+TG KGYGFC Y+D A L
Sbjct: 69 VFVGGLPYYFTEIQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 128
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQ 95
G ++ + L V A G ++ ++
Sbjct: 129 NGLKMGDKTLTVRRATESGGQSKSEQE 155
>gi|189204223|ref|XP_001938447.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985546|gb|EDU51034.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 319
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 54/83 (65%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A++ + +F+GN+ ++ +++ L ++ R++ V+ R+ IDR TG+P+G+ ++ D +A
Sbjct: 221 ANAPSKTLFIGNMSFEMSDKDLNDLFRDIRNVMDVRVAIDRRTGQPRGFAHADFIDVASA 280
Query: 62 LSARRNLQGYEINGRQLRVDFAE 84
A+ L I GRQLR+D+++
Sbjct: 281 TKAKEVLSEKVIYGRQLRIDYSK 303
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
++ +++GN+ Y+ T +QL + G V S ++V D G +G+G+ E+ + A +A
Sbjct: 128 NKMLYIGNLYYEVTADQLKRVFSRFGEVESVKIVYDNR-GLSRGFGYVEFANMADAQAAI 186
Query: 66 RNLQGYEINGRQLRVDF 82
NL GR + V +
Sbjct: 187 DNLDMQVFEGRNMVVQY 203
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ +D T + + EI E G + L DR+TG KG+G+ ++ +E A +A
Sbjct: 338 TLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALDA 397
Query: 68 LQGYEINGRQLRVDFA 83
L G +I GR +R+D+A
Sbjct: 398 LNGQDIAGRNIRIDYA 413
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ E+ L G +V R++ DRETG+ KG+G+ E+ A A+ +
Sbjct: 236 LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEM 295
Query: 69 QGYEINGRQLRVDFA 83
YE++GR L VDF+
Sbjct: 296 HQYELDGRPLNVDFS 310
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 361 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 420
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 421 NGIKMGDKTLTV 432
>gi|71030936|ref|XP_765110.1| U1 small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68352066|gb|EAN32827.1| U1 small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 227
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
+R +FV NI YD TE+QL + + G + R++ DR + KP+GY F EY++E ++A
Sbjct: 106 YRTLFVANIAYDVTEKQLSKEFQTYGKIRRVRMIHDR-SNKPRGYAFIEYENERDMVTAY 164
Query: 66 RNLQGYEINGRQLRVD 81
+ G +I+GR++ VD
Sbjct: 165 KRADGKKISGRRVIVD 180
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
++ +FVG + YD TE+ L++ G V +V D+ +GKP+GY F E++ E +A
Sbjct: 104 YKTLFVGRLNYDVTEDDLLKEMESYGKVRQVAVVRDKISGKPRGYAFVEFEHERDMRAAY 163
Query: 66 RNLQGYEINGRQLRVDF 82
R G +NGR++ VDF
Sbjct: 164 RYADGMRLNGRRIVVDF 180
>gi|302894521|ref|XP_003046141.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
gi|256727068|gb|EEU40428.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
Length = 307
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++ G +PY+ +E ++ I + G V +LV D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 18 YIYFGGLPYELSEGDVVTIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDN 77
Query: 68 LQGYEINGRQLRVDFA 83
L G EI GR +RVD A
Sbjct: 78 LGGAEIGGRLVRVDHA 93
>gi|218438646|ref|YP_002376975.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218171374|gb|ACK70107.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 105
Score = 65.5 bits (158), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y+ T+++L E+ E G V L +DRETG+ +G+GF E + +A L
Sbjct: 3 IYVGNLYYEVTQDELREVFAEYGTVSRVYLPVDRETGRMRGFGFVEMSTDAEEDTAIETL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRG 98
G E GRQL+V+ A + D NR G G
Sbjct: 63 DGAEWMGRQLKVNKAR-PRENDNNRGSGGG 91
>gi|388518645|gb|AFK47384.1| unknown [Lotus japonicus]
Length = 307
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+P+ +L EI RE G V + R+V+DRETG+ +G+GF E A L
Sbjct: 223 VYVGNLPWSVDAARLEEIFREHGNVENARIVMDRETGRSRGFGFVTMSSEADINGAIAAL 282
Query: 69 QGYEINGRQLRVDFAENDKG 88
G ++GR +RV AE G
Sbjct: 283 DGQSLDGRTIRVSVAEGRSG 302
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ +FVGN+P+D E L + E G V ++ ++ T + +G+GF E
Sbjct: 117 SEDLKIFVGNLPWDVESENLAMLFEEAGSVEFAEVIYNKATNQSRGFGFVIMSTAEDLEK 176
Query: 64 ARRNLQGYEINGRQLRVD 81
A GYE++GR L V+
Sbjct: 177 ALNKFSGYELDGRVLTVN 194
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 65.1 bits (157), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +F+G + Y+ ++ L + G VV R++ DRETG+ +G+GF + EE+
Sbjct: 33 MSSSK---LFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEES 89
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGA 89
A SA ++ G ++NGR +RV +A ND+ A
Sbjct: 90 ATSA-LSMDGQDLNGRNIRVSYA-NDRQA 116
>gi|108864608|gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
Length = 550
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 360 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 419
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 420 NGIKMGDKTLTV 431
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ +DA + L EI + G ++S R+ ET +PKG+G+ +Y + E A A
Sbjct: 251 TLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKALDA 310
Query: 68 LQGYEINGRQLRVDFA 83
LQG IN R +R+DF+
Sbjct: 311 LQGESINDRPVRLDFS 326
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVG + + +E L +G VVS R++++R T + +GYG+ +++D A A +
Sbjct: 150 TLFVGRLSWSVDDEWLKNEFAPIGGVVSARVIMERGTDRSRGYGYVDFEDISYAEKALKE 209
Query: 68 LQGYEINGRQLRVDFA 83
+QG EI+GR + VD +
Sbjct: 210 MQGKEIDGRPINVDMS 225
>gi|427782335|gb|JAA56619.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 812
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G + Y TE +I + + G VV+ L+ D++TGK KGY F Y+D+ + + + NL
Sbjct: 38 IFIGGLDYQLTEGDVICVFSQYGEVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNL 97
Query: 69 QGYEINGRQLRVDFAEN 85
G + R +RVD EN
Sbjct: 98 NGISLCKRTIRVDHVEN 114
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSA 64
+ +FVGNI ++A E+ L E G VV+ RL D ++G PKG+G+ + E A +A
Sbjct: 294 ESDTLFVGNISFEANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFGYITFSSVEDAKNA 353
Query: 65 RRNLQGYEINGRQLRVDFA 83
N+ G ++ GR +R+D+A
Sbjct: 354 MENMMGADVGGRPVRLDYA 372
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FVGN+ ++ +E L E G + R++ DRE+G+ KG+G+ E+ + A +A +
Sbjct: 192 KNLFVGNLSWNIDDEWLYREFEEFGEITGARVISDRESGRSKGFGYVEFANSADAAAALK 251
Query: 67 NLQGYEINGRQLRVDFAE-NDKGADRNREQGR 97
+G I+GR+ VDF+ D A ++R R
Sbjct: 252 AKKGALIDGREANVDFSTPRDNAAPKDRANAR 283
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 65.1 bits (157), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YDAT+E + + E G V L DRETG+P+G+ F E E+ SA L
Sbjct: 3 IYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIEAL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQ 95
G E GR LRV+ A R REQ
Sbjct: 63 DGAEWMGRDLRVNKA-------RPREQ 82
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 65.1 bits (157), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ +F+G + Y ++ L + G VV R++ DR+TG+ +G+GF + +E+
Sbjct: 33 MSSSK---LFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDES 89
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADR 91
A SA + G ++NGR +RV +A + A R
Sbjct: 90 ATSALSAMDGQDLNGRNIRVSYANDRPSAPR 120
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L + + G VV R++ D ETG+ +GYGF Y +E
Sbjct: 223 TEHK-LFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQ 281
Query: 64 ARRNLQGYEINGRQLRVDFA 83
A L G EI GR++RV+ A
Sbjct: 282 AIETLNGTEIEGREIRVNLA 301
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ L I ++ ++ DR TG+ +G+ F E +NL
Sbjct: 136 LYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKNL 195
Query: 69 QGYEINGRQLRVDFAENDK 87
G +GR +RV+ A+ K
Sbjct: 196 DGTLYSGRTMRVNMADRPK 214
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
gi|222836904|gb|EEE75297.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 325 IFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 384
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 385 NGIKMGDKTLTV 396
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 7 RC-----VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
RC +F+G I + + L E + G VV R+++DR+TG+ +G+GF Y E A
Sbjct: 35 RCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEA 94
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
SA + + G +++GR++RV++A
Sbjct: 95 SSAIQAMDGQDLHGRRVRVNYA 116
>gi|430812740|emb|CCJ29861.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 185
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++G +PYD TE +I I + G + L+ D++TGK KG+ F +Y+D+ + + A NL
Sbjct: 31 IYIGGLPYDLTEGDIICIFSQYGEPLDINLIRDKKTGKSKGFCFLKYEDQRSTILAVDNL 90
Query: 69 QGYEINGRQLRVDFAENDK--GADRNREQGRGGPGMAA 104
G ++ GR L+VD N + D + EQ GM A
Sbjct: 91 SGAKVLGRTLKVDHVLNYRHPKQDSDDEQSGKMIGMNA 128
>gi|425461431|ref|ZP_18840909.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9808]
gi|389825716|emb|CCI24327.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9808]
Length = 100
Score = 65.1 bits (157), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 44/75 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T E L E+ E G V L +DRETGK +G+GF E +E A L
Sbjct: 3 IYVGNLVYDVTTEALQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAIAIETL 62
Query: 69 QGYEINGRQLRVDFA 83
G E GRQ++V+ A
Sbjct: 63 DGAEWMGRQMKVNKA 77
>gi|401886096|gb|EJT50159.1| hypothetical protein A1Q1_00626 [Trichosporon asahii var. asahii
CBS 2479]
Length = 303
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A+ R VFV NIPYD +EEQ+ + EVGPV + +++E + G + TA
Sbjct: 5 ATQVSRTVFVANIPYDVSEEQIASVFSEVGPVAN----VEQE----RARGTPLFSSMATA 56
Query: 62 LSARRNLQGYEINGRQLRVDFAEND 86
SA RNLQ INGR +R++ + +D
Sbjct: 57 HSAVRNLQDVPINGRPVRIELSTDD 81
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 165 NDPLTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
D ++ LA+++ ++ +M++MK + T EQARQLL +P L ALFQA ++L + P
Sbjct: 126 TDAISKTLAEVNPGEMQRVMADMKALVTAQPEQARQLLADRPQLAYALFQAMLLLNIVDP 185
Query: 225 QVLQ--MPILRQGPGHPAQPLF 244
VLQ P+ Q PG+P P +
Sbjct: 186 SVLQRIQPLPGQNPGNPTAPAW 207
>gi|159487587|ref|XP_001701804.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158281023|gb|EDP06779.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 309
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V++G +P +EEQ+ +I + G + +F LV+DRETG KGYGFCEY D SA + L
Sbjct: 101 VYIGGLPACLSEEQVRQILQAFGTLKAFNLVLDRETGNSKGYGFCEYADPSVTDSAIQGL 160
Query: 69 QGYEINGRQL 78
I G+ L
Sbjct: 161 SALIIQGKPL 170
>gi|322697734|gb|EFY89510.1| U2 snRNP component IST3 [Metarhizium acridum CQMa 102]
Length = 308
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++ G +PYD TE +I I + G V +L D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FIYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFA 83
L G +I GR + VD A
Sbjct: 94 LGGADIGGRMISVDHA 109
>gi|406956570|gb|EKD84644.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 65.1 bits (157), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 51/75 (68%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG++P+ + +L EI + G VVS ++V DRETG+ +G+GF E +E A +A +NL
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 69 QGYEINGRQLRVDFA 83
G ++ GR++ V+ A
Sbjct: 61 NGADVEGRKIVVNIA 75
>gi|302770274|ref|XP_002968556.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
gi|302788312|ref|XP_002975925.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300156201|gb|EFJ22830.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300164200|gb|EFJ30810.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
Length = 477
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G + D E+ L E+C G + R++ D+ETG KGY F Y + ETA A L
Sbjct: 104 VFIGGVTRDTNEDDLRELCSPCGEIFEVRILKDKETGNNKGYAFVTYTNRETAEKAIETL 163
Query: 69 QGYEINGRQLRV 80
E+ GR+LR
Sbjct: 164 ANSELKGRKLRF 175
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPK-GYGFCEYKDEET 60
A+SQ + V+V N+P TEEQL + G + ++ + G+PK +GF + D
Sbjct: 272 ATSQIKVVYVRNLPEAVTEEQLRGLFEHHGEITKV-VLPQSKPGQPKRDFGFVHFADRND 330
Query: 61 ALSARRNLQGYEINGRQLRVDFAE---NDKGADRNREQGRGG------PGMAAI---VDP 108
AL A + YE+ GR L A+ KG D+ R G P AA VD
Sbjct: 331 ALKAIEKTEKYELEGRVLESSLAKPPVEKKGMDQPLAPQRLGILSQLQPRTAAYSYPVDI 390
Query: 109 QKQLGGPAIHGESVHHQPI 127
+G +G++ ++QP+
Sbjct: 391 YNNIGTGGGYGQNRYNQPL 409
>gi|297842135|ref|XP_002888949.1| hypothetical protein ARALYDRAFT_476521 [Arabidopsis lyrata subsp.
lyrata]
gi|297334790|gb|EFH65208.1| hypothetical protein ARALYDRAFT_476521 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 168 LTLHLAKMSRNQLNEIMSEMKLMATQNKEQARQLLLAKPPLLKALFQAQIMLGMATP 224
L +LA M+++QL +IMS+MK + QN +QAR++L+ P L KALFQAQIMLGM P
Sbjct: 12 LPANLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTKALFQAQIMLGMVQP 68
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 505 ISPDVESALLQQVLSLTPEQLNSLPPEQRQQVIQLQQAL 543
IS ++E ALLQQV+SLTPEQ+N LPPEQR QV+QLQQ L
Sbjct: 348 ISAEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQIL 386
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 436
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 437 NGIKMGDKTLTV 448
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG++P+ + +L E+ + G VVS ++V DRETG+ +G+GF E +E A +A +NL
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 69 QGYEINGRQLRVDFA 83
G ++ GR++ V+ A
Sbjct: 61 NGTDVEGRKIVVNIA 75
>gi|392579140|gb|EIW72267.1| hypothetical protein TREMEDRAFT_24060, partial [Tremella
mesenterica DSM 1558]
Length = 111
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G + Y+ TE +I + + G VV L D+ETGK +G+GF Y+D+ + + A N+
Sbjct: 32 VFIGGLSYEMTEGDVIIVFSQWGEVVDINLPRDKETGKTRGFGFLMYEDQRSTVLAVDNM 91
Query: 69 QGYEINGRQLRVDFAENDK 87
G +I GR +RVD ++ K
Sbjct: 92 NGAQILGRTIRVDHCKSYK 110
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ VFVG + Y +++L E + G VV R+++DR+TG+ +G+GF + E
Sbjct: 37 MSSSK---VFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASED 93
Query: 61 ALSARRNLQGYEINGRQLRVDFAEN 85
A SA + L G +++GR++R +A +
Sbjct: 94 ASSAIQALDGQDLDGRRIRCSYATD 118
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
M+SS+ VFVG + Y +++L E + G VV R+++DR+TG+ +G+GF + E
Sbjct: 37 MSSSK---VFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASED 93
Query: 61 ALSARRNLQGYEINGRQLRVDFAEN 85
A SA + L G +++GR++R +A +
Sbjct: 94 ASSAIQALDGQDLDGRRIRCSYATD 118
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis lupus
familiaris]
Length = 162
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
SS+ +FVG + ++ E+ L + R GP+ +V DRET + +G+GF + D E A
Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHAS 61
Query: 63 SARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG 101
A R + G ++GRQ+RVD A R G G G
Sbjct: 62 DAMRAMNGESLDGRQIRVDHAGKSARGTRGGAFGAHGRG 100
>gi|212275376|ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea mays]
gi|194689494|gb|ACF78831.1| unknown [Zea mays]
gi|219887513|gb|ACL54131.1| unknown [Zea mays]
gi|238010456|gb|ACR36263.1| unknown [Zea mays]
gi|413921450|gb|AFW61382.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921451|gb|AFW61383.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921452|gb|AFW61384.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921453|gb|AFW61385.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 467
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D TEE L E+C +G + RL D++T + KG+ F + D+E A A ++
Sbjct: 107 VFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQRAIEDV 166
Query: 69 QGYEINGRQLRVDFAE 84
Q E GR LR ++
Sbjct: 167 QDREFKGRTLRCSLSQ 182
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGP-VVSFRLVIDR-ETGKPKGYGFCEYKDE 58
++ ++HR +FVGN+P +EE+L + GP V++ + D+ + + +G+ F EY +
Sbjct: 180 LSQAKHR-LFVGNVPKGLSEEELTNTIKGKGPGVINIEMFKDQHDPNRNRGFLFVEYYNH 238
Query: 59 ETALSARRNLQ--GYEINGRQLRVDFAE 84
A AR+ L ++++G QL V +AE
Sbjct: 239 ACADYARQKLSSPNFKVDGSQLTVSWAE 266
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A++Q + ++V N+P + ++E++ ++ + G V ++ + G + +GF + + +A
Sbjct: 276 AAAQVKTIYVKNLPENVSKEKIKDLFDKHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSA 334
Query: 62 LSARRNLQGYEINGRQLRVDFAE--NDKGADRNREQGRGGP 100
L A + + YEI+G+ L V A+ DK D + G GGP
Sbjct: 335 LKAVKGSEKYEIDGQVLEVSMAKPLADKKPDHSHRPG-GGP 374
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
++H+ +FVGN+ + T E L + + G VV R++ D ETG+ +GYGF Y +E
Sbjct: 339 TEHK-LFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQ 397
Query: 64 ARRNLQGYEINGRQLRVDFA 83
A L G EI GR++RV+ A
Sbjct: 398 AIETLNGTEIEGREIRVNLA 417
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++ GN+PY+ L I ++ ++ DR TG+ +G+ F E +NL
Sbjct: 252 LYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKNL 311
Query: 69 QGYEINGRQLRVDFAENDK 87
G +GR +RV+ A+ K
Sbjct: 312 DGTLYSGRTMRVNMADRPK 330
>gi|224373359|ref|YP_002607731.1| RNA-binding protein [Nautilia profundicola AmH]
gi|223589280|gb|ACM93016.1| RNA-binding protein [Nautilia profundicola AmH]
Length = 84
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGNI Y ATE+ L + E G V+S +++ DRETG+ KG+GF E E A +A
Sbjct: 2 KTIYVGNINYQATEDDLRPVFAEYGEVISVKIINDRETGRSKGFGFVEM--ESGADTAIE 59
Query: 67 NLQGYEINGRQLRVDFA 83
L G + GR+LRV+ A
Sbjct: 60 ELDGKDFQGRRLRVNEA 76
>gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|108864607|gb|ABA94914.2| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|222616290|gb|EEE52422.1| hypothetical protein OsJ_34542 [Oryza sativa Japonica Group]
Length = 574
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 360 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 419
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 420 NGIKMGDKTLTV 431
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 436
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 437 NGIKMGDKTLTV 448
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 359 IFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 418
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 419 NGIKMGDKTLTV 430
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 7 RC--------VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDE 58
RC +FVG I Y+ E+ L + + G V+ R+++DRE+G+ KG+GF Y
Sbjct: 36 RCFSSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTV 95
Query: 59 ETALSARRNLQGYEINGRQLRVDFAE 84
E A SA + L G ++ GR++ V+FA
Sbjct: 96 EEASSAIQALDGQDLYGRRVGVNFAN 121
>gi|330914835|ref|XP_003296804.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
gi|311330893|gb|EFQ95099.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
Length = 326
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 55/84 (65%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A++ + +F+GN+ ++ +++ L ++ R++ V+ R+ IDR TG+P+G+ ++ D +A
Sbjct: 228 ANTPSKTLFIGNMSFEMSDKDLNDLFRDIRNVMDVRVAIDRRTGQPRGFAHADFIDVASA 287
Query: 62 LSARRNLQGYEINGRQLRVDFAEN 85
A+ L I GRQLR+D++++
Sbjct: 288 TKAKEVLSEKIIYGRQLRIDYSKS 311
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
++ +++GN+ Y+ T +QL + G V S ++V D G +G+G+ E+ + A +A
Sbjct: 135 NKMLYIGNLYYEVTADQLKRVFSRFGEVESVKIVYDNR-GLSRGFGYVEFGNLADAQAAI 193
Query: 66 RNLQGYEINGRQLRVDF 82
NL GR + V +
Sbjct: 194 DNLDMQVFEGRNMVVQY 210
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+ + E + E+ G + RL D ETG+PKGYG+ E+ + A
Sbjct: 327 SPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEFSSVDEAR 386
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A LQG +I GR +R+DF+
Sbjct: 387 QALNELQGTDIGGRAIRLDFS 407
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+ ++ EE L G + R++ +RETG+ +G+G+ EY D +A +A
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAK 286
Query: 69 QGYEINGRQLRVDFAE 84
+ E++GR + +D+A+
Sbjct: 287 KDTELDGRTINLDYAK 302
>gi|168030966|ref|XP_001767993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680835|gb|EDQ67268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY +EEQ++++ G + +F LV DR+TG KGYGFC Y+D A L
Sbjct: 288 IFVGGLPYYLSEEQIMDLLSSFGHLRAFDLVKDRDTGNSKGYGFCVYQDPSVMDIACAAL 347
Query: 69 QGYEINGRQLRV 80
G ++ R L V
Sbjct: 348 NGLKMGDRTLTV 359
>gi|345864924|ref|ZP_08817119.1| RNP-1 like RNA-binding protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124004|gb|EGW53889.1| RNP-1 like RNA-binding protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 91
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ ++ T+++L E+ G V S ++++DRETG+ +G+GF E D A SA +L
Sbjct: 3 IYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAIDSL 62
Query: 69 QGYEINGRQLRVDFAE---NDKGADRNR 93
++ GR LRV+ A+ N G R R
Sbjct: 63 NDSQLGGRSLRVNEAKPRTNSGGGGRGR 90
>gi|254410328|ref|ZP_05024107.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182534|gb|EDX77519.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T E L + + G V +L DRETG+P+G+GF E + ++ +A L
Sbjct: 3 IYVGNLSYDVTAEDLSAVFADYGAVKRVQLPTDRETGRPRGFGFVEMETDDEETAAIEAL 62
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQG 96
G E GR ++V+ A + NR+ G
Sbjct: 63 DGAEWMGRNMKVNKARPRENRGGNRKNG 90
>gi|345879103|ref|ZP_08830782.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223892|gb|EGV50316.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 93
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ ++ T+++L E+ G V S ++++DRETG+ +G+GF E D A SA +L
Sbjct: 5 IYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAIDSL 64
Query: 69 QGYEINGRQLRVDFAE---NDKGADRNR 93
++ GR LRV+ A+ N G R R
Sbjct: 65 NDSQLGGRSLRVNEAKPRTNSGGGGRGR 92
>gi|449431998|ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
gi|449477982|ref|XP_004155183.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
Length = 481
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G + D EE L ++C +G + R++ D+++G+ KGY F +K +E A A +L
Sbjct: 107 VFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDL 166
Query: 69 QGYEINGRQLRVDFAEN 85
G E+ G+ +R +++
Sbjct: 167 HGKEVKGKTIRCSLSDS 183
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A++Q + ++V NIP + T EQL E+ ++ G V + + + + F Y + +A
Sbjct: 275 AAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSA 334
Query: 62 LSARRNLQGYEINGRQLRVDFAE--NDKGAD 90
L A + + YEI G+ L V A+ +DK +D
Sbjct: 335 LKAVKETEKYEIEGQLLEVVLAKPQSDKKSD 365
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 356 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 415
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 416 NGIKMGDKTLTV 427
>gi|413921449|gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 465
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+G +P D TEE L E+C +G + RL D++T + KG+ F + D+E A A ++
Sbjct: 107 VFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQRAIEDV 166
Query: 69 QGYEINGRQLRVDFAE 84
Q E GR LR ++
Sbjct: 167 QDREFKGRTLRCSLSQ 182
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
++ ++HR +FVGN+P +EE+L + GP V + + + +G+ F EY +
Sbjct: 180 LSQAKHR-LFVGNVPKGLSEEELTNTIKGKGPGVINIEMFKHDPNRNRGFLFVEYYNHAC 238
Query: 61 ALSARRNLQ--GYEINGRQLRVDFAE 84
A AR+ L ++++G QL V +AE
Sbjct: 239 ADYARQKLSSPNFKVDGSQLTVSWAE 264
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
A++Q + ++V N+P + ++E++ ++ + G V ++ + G + +GF + + +A
Sbjct: 274 AAAQVKTIYVKNLPENVSKEKIKDLFDKHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSA 332
Query: 62 LSARRNLQGYEINGRQLRVDFAE--NDKGADRNREQGRGGP 100
L A + + YEI+G+ L V A+ DK D + G GGP
Sbjct: 333 LKAVKGSEKYEIDGQVLEVSMAKPLADKKPDHSHRPG-GGP 372
>gi|350296577|gb|EGZ77554.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 356
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+P+ A E + + V V S R+ D+E+G+PKG+ + + E A
Sbjct: 208 SPESDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAK 267
Query: 63 SARRNLQGYEINGRQLRVDFAE 84
+A L G ++NGR +R+D+A+
Sbjct: 268 NAFEQLNGSDLNGRPVRLDYAK 289
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++VGN+ + + L+ + S R+V DRE+G+ +G+G+ ++ E A A
Sbjct: 109 TLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQKAYDA 168
Query: 68 LQGYEINGRQLRVDFAENDKG 88
G + GR++R+DFA D G
Sbjct: 169 KSGALLEGREMRLDFAAKDAG 189
>gi|336464486|gb|EGO52726.1| hypothetical protein NEUTE1DRAFT_91358 [Neurospora tetrasperma FGSC
2508]
Length = 356
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+P+ A E + + V V S R+ D+E+G+PKG+ + + E A
Sbjct: 208 SPESDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAK 267
Query: 63 SARRNLQGYEINGRQLRVDFAE 84
+A L G ++NGR +R+D+A+
Sbjct: 268 NAFEQLNGSDLNGRPVRLDYAK 289
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++VGN+ + + L+ + S R+V DRE+G+ +G+G+ ++ E A A
Sbjct: 109 TLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQKAYDA 168
Query: 68 LQGYEINGRQLRVDFAENDKG 88
G + GR++R+DFA D G
Sbjct: 169 KSGALLEGREMRLDFAAKDAG 189
>gi|356508744|ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 305
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
++VGN+P+D +L +I E G VV+ R+V DRET + +G+GF DE A
Sbjct: 221 SIYVGNLPWDVDNTRLEQIFSEHGNVVNARVVYDRETRRSRGFGFVTMSDETEMKDAVAA 280
Query: 68 LQGYEINGRQLRVDFAEN 85
L G ++GR +RV AE+
Sbjct: 281 LDGQSLDGRPIRVSVAED 298
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+PYD ++L + + G V ++ +RET + +G+GF E A +A
Sbjct: 126 LFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAENAVEKF 185
Query: 69 QGYEINGRQLRVDFA 83
Y+ +GR L V+ A
Sbjct: 186 SRYDFDGRLLTVNKA 200
>gi|291286869|ref|YP_003503685.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884029|gb|ADD67729.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 89
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ Y E+ + + ++G V S R++ DR+TG+ KG+GF E + + A +A L
Sbjct: 3 IYVGNLSYSTNEDDISALFSKIGEVDSVRIITDRDTGRSKGFGFVEMANSDQAKAAIDKL 62
Query: 69 QGYEINGRQLRVDFAE---NDKGADR 91
E++GR L V+ A+ ND+G R
Sbjct: 63 NETELDGRNLTVNEAKPKNNDRGNSR 88
>gi|425774283|gb|EKV12592.1| hypothetical protein PDIP_51790 [Penicillium digitatum Pd1]
gi|425776284|gb|EKV14506.1| hypothetical protein PDIG_32200 [Penicillium digitatum PHI26]
Length = 281
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+++G +P+D +E +I I + G V LV D+ETGK KG+ F +Y+D+ + A N
Sbjct: 34 YIYIGGLPFDLSEGDVIAIFSQYGEPVHVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFAENDKGAD 90
L G + GR LRVD A + D
Sbjct: 94 LGGATVMGRLLRVDHARYKRKDD 116
>gi|422303993|ref|ZP_16391342.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|425468337|ref|ZP_18847364.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
gi|389790955|emb|CCI13203.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|389885016|emb|CCI34745.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
Length = 100
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T + L E+ E G V L +DRETGK +G+GF E +E A L
Sbjct: 3 IYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIETL 62
Query: 69 QGYEINGRQLRVDFA 83
G E GRQ++V+ A
Sbjct: 63 DGAEWMGRQMKVNKA 77
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 7 RC-----VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
RC +FVG + Y E L + G ++ ++++DR+TG+ +G+GF Y EE A
Sbjct: 26 RCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQA 85
Query: 62 LSARRNLQGYEINGRQLRV 80
SA L G +++GR LRV
Sbjct: 86 SSAIMALDGKDLHGRNLRV 104
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG I Y + L E G V+ ++++DRETG+ +G+GF + E A SA + +
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGM 101
Query: 69 QGYEINGRQLRVDFA 83
G +++GR++RV++A
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ ++ T++ L E R+ G VV ++ DRETG+ +G+GF Y EE A +A L
Sbjct: 5 IYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISGL 64
Query: 69 QGYEINGRQLRVDFA 83
++GRQ++V+ A
Sbjct: 65 NETSLDGRQIKVNLA 79
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG I Y + L E G V+ ++++DRETG+ +G+GF + E A SA + +
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGM 101
Query: 69 QGYEINGRQLRVDFA 83
G +++GR++RV++A
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|225434618|ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
Length = 429
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG IP+D TE L+ + + G +V LV D+ TGK KG+ F Y+D+ + A NL
Sbjct: 38 VFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNL 97
Query: 69 QGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 98 NGAQILGRIIRVDHVSN 114
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG + +D TE+ L E + G + +++DRETG+P+G+GF +Y + E A A +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 69 QGYEINGRQLRVDFA 83
G ++GR +RV+ A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 376 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 435
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 436 NGIKMGDKTLTV 447
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 386 VFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 445
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 446 NGIKMGDKTLTV 457
>gi|393788491|ref|ZP_10376619.1| hypothetical protein HMPREF1068_02899 [Bacteroides nordii
CL02T12C05]
gi|392655108|gb|EIY48753.1| hypothetical protein HMPREF1068_02899 [Bacteroides nordii
CL02T12C05]
Length = 115
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+ + Y+ ++ L E+ E G V S R++ DRETG+ KGYGF E DEE A L
Sbjct: 3 IFIAGLSYNISDSDLTELFAEYGEVASARVISDRETGRSKGYGFVEMADEEAGNKAISAL 62
Query: 69 QGYEINGRQLRVDFA 83
EI+GR+L V A
Sbjct: 63 NEAEIDGRKLAVSVA 77
>gi|255725524|ref|XP_002547691.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
gi|240135582|gb|EER35136.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
Length = 137
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSAR 65
+R V+VGN+ Y +T EQL E VG + ++ DR +G PKGY + E++ EE+A+ A
Sbjct: 28 NRSVYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRFSGLPKGYAYIEFETEESAVKAI 87
Query: 66 RNLQGYEINGRQLRV 80
L G E GR LR+
Sbjct: 88 EELDGKEFKGRALRI 102
>gi|170090564|ref|XP_001876504.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647997|gb|EDR12240.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG + +D TE +I I + G V+ + D++TGK KG+GF Y+D+ + + A NL
Sbjct: 35 VFVGGLHFDLTEGDVITIFSQYGEVMDLHMPRDKDTGKTKGFGFLMYEDQRSTVLAVDNL 94
Query: 69 QGYEINGRQLRVDFAENDK 87
G ++ R LRVD +N K
Sbjct: 95 NGAKVLERTLRVDHVKNYK 113
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+++GN+PY T QL E+ E G VVS +++ D+ T + +G+ F E A A R
Sbjct: 117 LYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMF 176
Query: 69 QGYEINGRQLRVDFAENDKGADR 91
G +I GR +RV+F E +G ++
Sbjct: 177 DGSQIGGRTVRVNFPEVPRGGEK 199
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
S H+ ++ GN+ + T + L + ++S +++ DR +GK +G+GF ++ E
Sbjct: 213 FVDSPHK-IYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAED 271
Query: 61 ALSARRNLQGYEINGRQLRVDFA 83
A SA ++ G E+ GR LR++ A
Sbjct: 272 AESALESMNGVEVEGRPLRLNIA 294
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 378 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 437
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 438 NGIKMGDKTLTV 449
>gi|321474055|gb|EFX85021.1| hypothetical protein DAPPUDRAFT_194198 [Daphnia pulex]
Length = 247
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+G +PY+ +E +I I + G V + LV D+ TGK KG+ F Y+D+ + + A NL
Sbjct: 38 IFIGGLPYELSEGDIICIFSQYGEVANINLVRDKVTGKSKGFCFLCYEDQRSTILAVDNL 97
Query: 69 QGYEINGRQLRVDFAE 84
++ GR LRVD E
Sbjct: 98 NSIKVCGRTLRVDHVE 113
>gi|255949586|ref|XP_002565560.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592577|emb|CAP98933.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 279
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+++G +P+D +E +I I + G V LV D+ETGK KG+ F +Y+D+ + A N
Sbjct: 34 YIYIGGLPFDLSEGDIITIFSQYGEPVHVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFAENDKGAD 90
L G + GR LRVD A + D
Sbjct: 94 LGGATVMGRLLRVDHARYKRKDD 116
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+ + L + E G V+ R++ DRE+G+ +G+GF Y E +A NL
Sbjct: 179 VYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNL 238
Query: 69 QGYEINGRQLRVDFAEN 85
G +++GRQ+RV AE+
Sbjct: 239 DGADLDGRQIRVTVAES 255
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
S+ VFVGN+P+ QL + + G V ++ D+ TG+ +G+GF E
Sbjct: 78 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEV 137
Query: 64 ARRNLQGYEINGRQLRVD 81
A GY ++GR LRV+
Sbjct: 138 AVDQFNGYVLDGRSLRVN 155
>gi|167375953|ref|XP_001733793.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904968|gb|EDR30090.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 308
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFV NIPY + + GPV + R++ ++ETGK +G+G+ ++ D E A +
Sbjct: 149 VFVKNIPYGWATNDMYQYFASSGPVKT-RVITNKETGKSRGFGYLDFVDLEAAKKFVQEH 207
Query: 69 QGYEINGRQLRVDFAENDKGADRNREQGRGG 99
QG E++GR L +D A+ KG D++ + G+ G
Sbjct: 208 QGEEVDGRPLFLDLADGKKGGDKDNDGGKFG 238
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+D ++L ++ E G VV R+V DRETG+ +G+GF +E A L
Sbjct: 209 IYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVNDAIAAL 268
Query: 69 QGYEINGRQLRVDFAE 84
G + GR ++V+ AE
Sbjct: 269 DGQNLEGRAIKVNVAE 284
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+PYD + L + + G V ++ +R+T + +G+GF E A A
Sbjct: 115 LFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAVEKF 174
Query: 69 QGYEINGRQLRVDFA 83
YE+NGR L V+ A
Sbjct: 175 NRYEVNGRLLTVNIA 189
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 333 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAAL 392
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 393 NGIKMGDKTLTV 404
>gi|220903771|ref|YP_002479083.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868070|gb|ACL48405.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 88
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
MA+S ++VGN+ + T+ + + G V+S L+ DRETG+ +G+GF E +D++
Sbjct: 1 MATS----IYVGNLSWSTTQGDVESLFSAFGQVLSVNLISDRETGRARGFGFVEMEDDDA 56
Query: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADR 91
A +A L G E++GR LRV+ AE K A R
Sbjct: 57 A-NAISALDGKEVDGRSLRVNKAEPKKPAAR 86
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 360 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 419
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 420 NGIKMGDKTLTV 431
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +F+GN+ + E + E+ G + RL D ETG+PKGYG+ E+ + A
Sbjct: 326 SPESNTLFLGNLVFGVDENAVREVFESQGTIQGIRLPTDPETGRPKGYGYVEFSSVDEAR 385
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A +LQG +I GR +R+DF+
Sbjct: 386 QALNDLQGTDIGGRAIRLDFS 406
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+F+GN+ ++ EE L G + R++ +RETG+ +G+G+ EY D +A +A
Sbjct: 226 LFIGNLSWNIDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADAASAKAAYEAK 285
Query: 69 QGYEINGRQLRVDFAE 84
+ E++GR + +D+A+
Sbjct: 286 KDTELDGRTINLDYAK 301
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD T+E L E+ E G V +L DRETG+P+G+GF E EE A L
Sbjct: 3 IYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAIDAL 62
Query: 69 QGYEINGRQLRVDFAE--NDKGADRNREQGRGG 99
E GR ++V+ A+ ++ R+ G GG
Sbjct: 63 DSAEWMGRDIKVNKAKPREERKPSNRRDPGAGG 95
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ +DA + + E+ + G ++S R+ ET +PKG+G+ +Y D E+A A
Sbjct: 262 TLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDVESAKKALDA 321
Query: 68 LQGYEINGRQLRVDFA 83
LQG IN R +R+DF+
Sbjct: 322 LQGEYINNRPVRLDFS 337
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+FVG + + +E L +G V+S R++ ++ T + +GYG+ ++K++ A A +
Sbjct: 162 TIFVGRLSWSIDDEWLKTEFEPIGGVLSARVIYEKGTDRSRGYGYVDFKNKTFAEKAIKE 221
Query: 68 LQGYEINGRQLRVDFAEN---DKGADRNREQG 96
+QG EI+GR + D + + G DR ++ G
Sbjct: 222 MQGKEIDGRPINCDMSTSKPASNGGDRAKKFG 253
>gi|358336551|dbj|GAA55028.1| nucleolar protein 12 [Clonorchis sinensis]
Length = 459
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VF+GN+P+D EE++ + GP+ + RL+ D+ETG KG+GF +Y D A R+
Sbjct: 268 VFLGNLPFDVQEEEVRSAMSKFGPIANVRLIRDKETGAVKGFGFVQYTDPAAISLAIRSS 327
Query: 69 QGYEINGRQLRV 80
+ + GR +R+
Sbjct: 328 ESVSVRGRPIRI 339
>gi|413920212|gb|AFW60144.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 502
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 327 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAAL 386
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 387 NGIKMGDKTLTV 398
>gi|395754448|ref|XP_003780626.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked 2 [Pongo abelii]
Length = 317
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 5 LLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFN 64
Query: 70 GYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 65 GIKIKGRTIRVDHVSN 80
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ +DA E + E E G VV+ RL D+ETG PKG+G+ + E A +A
Sbjct: 345 TLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDA 404
Query: 68 LQGYEINGRQLRVDFA 83
+ G +I GR +R+D+A
Sbjct: 405 MMGADIAGRPVRLDYA 420
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ +FVGN+ ++ +E L E G + R++ D+ TG+ KG+G+ E+ A +A
Sbjct: 240 KNLFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVKSSDAAAALA 299
Query: 67 NLQGYEINGRQLRVDFAE-NDKGADRNREQGR 97
+G I+GR+ VDF+ D A R R R
Sbjct: 300 AKKGALIDGREANVDFSTPRDTTAPRERANNR 331
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 336 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 395
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 396 NGIKMGDKTLTV 407
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 336 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 395
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 396 NGIKMGDKTLTV 407
>gi|400597950|gb|EJP65674.1| U2 snRNP component IST3 [Beauveria bassiana ARSEF 2860]
Length = 319
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V+ G +PY+ +E +I I + G V +LV D+ETGK KG+G+ +Y+++ + A N
Sbjct: 34 YVYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYENQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGES 121
L G E+ GR LRVD A D ++++ + G D Q++ G P ES
Sbjct: 94 LGGAEVGGRLLRVDHARYSMRDDEDQDEFKVG-----WEDLQRKEGKPVSDDES 142
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GNI + A E + E E G ++ RL D E+G+PKG+G+ ++ + A SA +
Sbjct: 336 TLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQA 395
Query: 68 LQGYEINGRQLRVDFA 83
L G ++ GR +R+DF+
Sbjct: 396 LNGADLGGRSMRLDFS 411
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S++ +F+GN+ ++ EE L E G + R+V DR++G+ +G+G+ E+ + A
Sbjct: 227 SNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAA 286
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A + E++GR+L VDFA
Sbjct: 287 KAHAAKKDAELDGRKLNVDFA 307
>gi|358396474|gb|EHK45855.1| hypothetical protein TRIATDRAFT_283470 [Trichoderma atroviride IMI
206040]
Length = 332
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
V+ G +PY+ +E + I + G V +LV D+ETGK KG+G+ +Y+D+ + A N
Sbjct: 34 FVYFGGLPYELSEGDIATIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDN 93
Query: 68 LQGYEINGRQLRVDFA 83
L G EI GR LRVD A
Sbjct: 94 LGGAEIGGRLLRVDHA 109
>gi|303276150|ref|XP_003057369.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
gi|226461721|gb|EEH59014.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
Length = 472
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S ++ +FVG + YD E +L + GPV S R+V D ETGKP+GY F EY E
Sbjct: 190 SDPYKTLFVGRLSYDVDESKLRREFEQWGPVKSVRVVEDVETGKPRGYAFIEYNRESDMK 249
Query: 63 SARRNLQGYEINGRQLRVD 81
+A + G I +++ VD
Sbjct: 250 TAYKQADGRRIENKRVVVD 268
>gi|121719870|ref|XP_001276633.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119404845|gb|EAW15207.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 306
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +++GN+ ++ T+ L ++ ++V V+ R+ IDR TG+P+G+ E+ D E+A
Sbjct: 213 RTLYIGNLSFEMTDRDLNDLFKDVSNVIDVRVSIDRRTGQPRGFAHAEFIDAESAQKGLE 272
Query: 67 NLQGYEINGRQLRVDFAENDKGADR 91
L GRQLR+D++ ++ A+R
Sbjct: 273 ILSRKSPYGRQLRLDYSHTNRRAER 297
>gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa Japonica Group]
Length = 331
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 155 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 214
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 215 NGIKMGDKTLTV 226
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F +V D+ETG KGY FC YKD A L
Sbjct: 394 IFVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDGTVTDIACAAL 453
Query: 69 QGYEINGRQLRV 80
G ++ R L V
Sbjct: 454 NGIQLGDRTLTV 465
>gi|410465997|ref|ZP_11319150.1| RRM domain-containing RNA-binding protein [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409980981|gb|EKO37622.1| RRM domain-containing RNA-binding protein [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 97
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ E+++ ++ G V S +L++DRETG+ +G+GF E D + A +A + L
Sbjct: 5 LYVGNLPFSTNEDEIRDLFAAYGDVTSVKLIVDRETGRLRGFGFVEMGD-DGADAAMQGL 63
Query: 69 QGYEINGRQLRVDFAE 84
G + GR LRV+ AE
Sbjct: 64 NGKDFGGRDLRVNEAE 79
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S + +FVGN+P+ A E+ + + + V S R+ D+E+G+PKG+ + + E A
Sbjct: 397 SPESDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAK 456
Query: 63 SARRNLQGYEINGRQLRVDFAE 84
A L G +++GR +R+D+A+
Sbjct: 457 KAFETLNGSDLDGRPVRLDYAK 478
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%)
Query: 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
AS + ++VGN+ + + L E + VG VV R+V D+++G+ +G+G+ ++++ + A
Sbjct: 291 ASEKSSTLWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFENPDAA 350
Query: 62 LSARRNLQGYEINGRQLRVDFA 83
A G + GR++R+DFA
Sbjct: 351 EKAYNEKNGAFLQGREMRLDFA 372
>gi|344924967|ref|ZP_08778428.1| RNA-binding region RNP-1 [Candidatus Odyssella thessalonicensis
L13]
Length = 94
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++V N+PY ++ L ++ + G VVS +++ D+ +G+ KG+GF E + E+ A SA L
Sbjct: 5 LYVSNLPYSVNDQTLAQLFGDHGAVVSAKVITDKMSGRSKGFGFVEMESEQQANSAMEKL 64
Query: 69 QGYEINGRQLRVDFAE-NDKGADRNREQGR 97
G ++NGR++ V A ++GA+R R GR
Sbjct: 65 NGQDLNGRRMNVAIARPKEEGAER-RPMGR 93
>gi|158333760|ref|YP_001514932.1| RNA-binding domain-containing protein [Acaryochloris marina
MBIC11017]
gi|359463897|ref|ZP_09252460.1| RNA-binding region [Acaryochloris sp. CCMEE 5410]
gi|158304001|gb|ABW25618.1| RNA-binding region [Acaryochloris marina MBIC11017]
Length = 95
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+ YD TE+ L + E G V S +L DRETG+ +G+GF E D+ A L
Sbjct: 3 IYVGNLSYDVTEQDLNTVFAEYGTVKSAKLPTDRETGRVRGFGFVEMSDDAEETKAIEEL 62
Query: 69 QGYEINGRQLRVDFAE 84
G E GR L+V+ A+
Sbjct: 63 DGAEWMGRTLKVNKAK 78
>gi|115486631|ref|NP_001068459.1| Os11g0682300 [Oryza sativa Japonica Group]
gi|113645681|dbj|BAF28822.1| Os11g0682300, partial [Oryza sativa Japonica Group]
Length = 378
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 166 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 225
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 226 NGIKMGDKTLTV 237
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GN+ +D +E+ + E G V RL D ++G+PKG+G+ E+ +E+A +A
Sbjct: 313 TLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDA 372
Query: 68 LQGYEINGRQLRVDFA 83
+ G E+ GR LR+DF+
Sbjct: 373 MTGQELAGRPLRLDFS 388
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VG + ++ + L G V S R+ +DR +GK +G+G+ ++ A A
Sbjct: 215 IWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTSGKSRGFGYVDFATAAAAKKAFDEG 274
Query: 69 QGYEINGRQLRVDFA 83
QG E++GR +R+D +
Sbjct: 275 QGKEVDGRAIRIDLS 289
>gi|410056965|ref|XP_003954131.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked 2, partial [Pan troglodytes]
Length = 323
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 10 FVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69
+G +PY+ TE +I + + G +V+ LV D++TGK KG+ F Y+D+ + + A N
Sbjct: 11 LLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFN 70
Query: 70 GYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 71 GIKIKGRTIRVDHVSN 86
>gi|33864553|ref|NP_896112.1| RNA recognition motif-containing protein [Synechococcus sp. WH
8102]
gi|33632076|emb|CAE06529.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. WH 8102]
Length = 214
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVGN+P+ A +E +IE+ + G V + L ++R+TG+ +G+ F E DE +A L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVANCALPLERDTGRKRGFAFVEMADEAVEDAAIEGL 62
Query: 69 QGYEINGRQLRVDFAE 84
QG E+ GR LR++ AE
Sbjct: 63 QGAELMGRPLRINKAE 78
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F G++ + + L E + +V R+V D+ TG+ +G+G+ ++ D E+A A
Sbjct: 182 TLFAGSLSWGVDDNALYEAFKSFSGLVHARVVTDKNTGRSRGFGYVDFADSESATKAYEA 241
Query: 68 LQGYEINGRQLRVDFAE--------NDKGADRNREQG 96
+QG E++GR L +D+A D+ ADR G
Sbjct: 242 MQGQEVDGRALNLDYANAKPAESKPQDRAADRASRHG 278
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEY---KDEE 59
S++ +FVGN+P+D ++ + E EV V S RL D E+G KG+G+ + D +
Sbjct: 282 SAESETLFVGNLPFDTEQDAVREFFGEVAEVASIRLPTDPESGNLKGFGYVTFNSIDDAK 341
Query: 60 TALSARRNLQ-GYEINGRQLRVDFA 83
TAL A+ G N R +R+DFA
Sbjct: 342 TALEAKNGASIGNGRNARAVRLDFA 366
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
+F+GNI + A E + E E G ++ RL D E+G+PKG+G+ ++ + A SA +
Sbjct: 364 TLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQA 423
Query: 68 LQGYEINGRQLRVDFA 83
L G ++ GR +R+DF+
Sbjct: 424 LNGADLGGRSMRLDFS 439
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
S++ +F+GN+ ++ EE L E G + R+V DR++G+ +G+G+ E+ + A
Sbjct: 255 SNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAA 314
Query: 63 SARRNLQGYEINGRQLRVDFA 83
A + E++GR+L VDFA
Sbjct: 315 KAHAAKKDAELDGRKLNVDFA 335
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 376 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 435
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 436 NGIKMGDKTLTV 447
>gi|443318092|ref|ZP_21047374.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442782317|gb|ELR92375.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 108
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+VGN+ Y+ATEE L E+ +E G V ++ +DRETG+ +G+ F E ++ +A +L
Sbjct: 3 VYVGNLSYNATEEDLTEVFKEYGAVKRVQVPVDRETGRMRGFAFVEMSEDAEENAAIEDL 62
Query: 69 QGYEINGRQLRVDFA 83
G E GR L+V+ A
Sbjct: 63 DGAEWMGRTLKVNKA 77
>gi|51893978|ref|YP_076669.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
gi|51857667|dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
Length = 86
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ T E L + G V + R++ DRETG+ +G+GF + DEE A A L
Sbjct: 5 IYVGNLPWSTTPEDLRALFEPYGEVENARIITDRETGRSRGFGFVDMADEEAARRAIAEL 64
Query: 69 QGYEINGRQLRVDFAENDKGA 89
YE GR L V+ A+ +G
Sbjct: 65 HNYEYGGRPLTVNEAQARQGG 85
>gi|413920348|gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 382 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 441
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 442 NGIKMGDKTLTV 453
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
VFVG IP+D TE +I + + G VV LV D+ TGK KG+ F Y+D+ + A NL
Sbjct: 38 VFVGGIPFDFTEGDVIAVFAQYGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNL 97
Query: 69 QGYEINGRQLRVD 81
G +++GR +RVD
Sbjct: 98 NGAQVSGRIIRVD 110
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETAL 62
++ H VF+GN+P+ + L E R G VV ++V DR+TG+ +G+GF + A
Sbjct: 93 AASHTKVFIGNLPWGVDDGSLEEFFRAHGKVVEVKIVYDRDTGRSRGFGFVTLSSPKEAD 152
Query: 63 SARRNLQGYEINGRQLRVDFAE 84
A ++L G + +GR+LRV A+
Sbjct: 153 EAVKSLDGADCDGRRLRVKLAD 174
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVI-DRETGKPKGYGFCEYKDEETALSARRN 67
++VGN+ ++ E+L ++ ++ G + V+ DRETG+ +G+G+ + A A +
Sbjct: 3 IYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAVQK 62
Query: 68 LQGYEINGRQLRVDFAENDKGADRNREQGRGGP 100
L G+ + GR L+ +++ K A G+ GP
Sbjct: 63 LDGHIVQGRALKASYSQPYKKA------GKEGP 89
>gi|108864648|gb|ABG22574.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 366
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 154 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 213
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 214 NGIKMGDKTLTV 225
>gi|359476715|ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 356 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 415
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 416 NGIKMGDKTLTV 427
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 353 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 412
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 413 NGIKMGDKTLTV 424
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRN 67
VFVG +PY+ TE ++ + + G +V+ +V D++TGKPKG+ F Y+++++ + A N
Sbjct: 36 WVFVGGLPYELTEGDVLCVFSQYGEIVNINMVRDKKTGKPKGFAFICYENQKSTVLAVDN 95
Query: 68 LQGYEINGRQLRVDFAEN 85
G +I GR +RVD N
Sbjct: 96 FNGVKIKGRTIRVDHVSN 113
>gi|313143724|ref|ZP_07805917.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
gi|313128755|gb|EFR46372.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
Length = 91
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
+ ++VGN+ Y T+++L E+ + G V S +L+ DRE+G+PKG+GF E +D AL A
Sbjct: 12 KTLYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRPKGFGFVEMED-NAALKAIE 70
Query: 67 NLQGYEINGRQLRVDFA 83
L + GR LRV+ A
Sbjct: 71 ALNEKDFRGRNLRVNEA 87
>gi|436841131|ref|YP_007325509.1| putative RNA-binding protein rbpE [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170037|emb|CCO23408.1| putative RNA-binding protein rbpE [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 87
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
++VGN+P+ ATEE + G V S +L+ DRETG+P+G+GF E D+ A A L
Sbjct: 5 LYVGNLPWSATEEDVRAAFEAFGEVTSVKLIEDRETGRPRGFGFVEM-DDNGAHDAIEAL 63
Query: 69 QGYEINGRQLRVDFAE 84
G + GR L+V+ A+
Sbjct: 64 DGKDFGGRNLKVNEAK 79
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 384 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 443
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 444 NGIKMGDKTLTV 455
>gi|116193997|ref|XP_001222811.1| hypothetical protein CHGG_06716 [Chaetomium globosum CBS 148.51]
gi|88182629|gb|EAQ90097.1| hypothetical protein CHGG_06716 [Chaetomium globosum CBS 148.51]
Length = 334
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
V+ G +PY+ +E +I I + G V +L D+ETG+ KG+G+ +Y+D+ + A NL
Sbjct: 35 VYFGGLPYELSEGDVITIFSQFGEPVFLKLARDKETGRSKGFGWLKYEDQRSTDLAVDNL 94
Query: 69 QGYEINGRQLRVDFA 83
G EI GR +RVD A
Sbjct: 95 GGAEIGGRMVRVDHA 109
>gi|413920214|gb|AFW60146.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 536
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
+FVG +PY TE Q+ E+ GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 327 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAAL 386
Query: 69 QGYEINGRQLRV 80
G ++ + L V
Sbjct: 387 NGIKMGDKTLTV 398
>gi|226291029|gb|EEH46457.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 273
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
R +F+GN+ ++ ++ +L E+ +++ V R+ +DR TG+P+G+ ++ D E+A +A
Sbjct: 175 RTLFIGNLSFEMSDRELNELFKDIKNVTDVRVSVDRRTGQPRGFAHADFLDVESAQAAFE 234
Query: 67 NLQGYEINGRQLRVD--FAENDKGADRNREQGRG 98
L+ GR LR+D F+ D DR R+ G G
Sbjct: 235 ILKDKAPYGRPLRLDYSFSSRDNTVDRLRDVGSG 268
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,537,147,014
Number of Sequences: 23463169
Number of extensions: 366198430
Number of successful extensions: 1007216
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15724
Number of HSP's successfully gapped in prelim test: 8787
Number of HSP's that attempted gapping in prelim test: 957621
Number of HSP's gapped (non-prelim): 51911
length of query: 551
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 403
effective length of database: 8,886,646,355
effective search space: 3581318481065
effective search space used: 3581318481065
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)