Query 008851
Match_columns 551
No_of_seqs 357 out of 1731
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 13:13:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008851.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008851hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 9.2E-21 6.7E-25 169.6 13.5 83 5-87 41-123 (139)
2 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 1.2E-20 8.7E-25 154.2 10.9 80 6-85 2-81 (82)
3 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 1.2E-20 8.7E-25 157.2 10.2 83 5-87 4-86 (89)
4 d1whwa_ d.58.7.1 (A:) Probable 99.8 3.3E-20 2.4E-24 157.2 12.9 85 3-87 5-89 (99)
5 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 5.1E-20 3.7E-24 154.9 13.3 83 4-86 5-87 (93)
6 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 1.9E-20 1.4E-24 157.5 10.4 85 3-87 6-90 (93)
7 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 5E-20 3.7E-24 150.2 12.3 80 6-85 2-81 (82)
8 d2cpza1 d.58.7.1 (A:383-484) C 99.8 3.5E-20 2.5E-24 158.4 11.7 86 3-88 15-100 (102)
9 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 5.9E-20 4.3E-24 152.8 12.3 83 4-86 5-87 (88)
10 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 5.9E-20 4.3E-24 150.1 11.3 78 8-85 2-79 (80)
11 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 8E-20 5.8E-24 152.4 11.2 83 4-86 6-88 (90)
12 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 1.8E-20 1.3E-24 160.0 6.1 83 6-88 8-90 (104)
13 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 8.4E-20 6.1E-24 151.8 10.0 83 5-87 4-86 (90)
14 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 2.5E-19 1.8E-23 153.3 12.9 82 5-87 9-90 (103)
15 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 1.9E-19 1.4E-23 148.8 11.8 81 3-84 3-83 (84)
16 d2cqca1 d.58.7.1 (A:109-191) A 99.8 1.6E-19 1.2E-23 148.1 11.2 77 4-80 7-83 (83)
17 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 6.4E-20 4.7E-24 151.8 8.5 80 7-86 2-81 (85)
18 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 1.9E-19 1.4E-23 148.4 10.8 80 4-83 4-85 (85)
19 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 4.3E-19 3.1E-23 148.8 12.6 82 4-87 6-87 (90)
20 d1fxla2 d.58.7.1 (A:119-203) H 99.8 1.8E-19 1.3E-23 148.9 10.1 80 4-83 4-85 (85)
21 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 2E-19 1.5E-23 146.6 9.9 80 6-85 1-80 (81)
22 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 6.3E-19 4.6E-23 146.9 12.9 84 2-87 4-87 (90)
23 d2cpha1 d.58.7.1 (A:454-547) P 99.8 3.4E-19 2.5E-23 150.0 10.6 84 4-87 6-91 (94)
24 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 2.8E-19 2E-23 146.4 9.8 79 9-87 1-80 (83)
25 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 6.2E-19 4.5E-23 143.4 11.3 77 8-85 2-78 (78)
26 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 1.1E-19 8.1E-24 148.2 5.9 76 7-83 1-76 (77)
27 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 8.8E-19 6.4E-23 144.0 10.9 77 9-85 1-80 (85)
28 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 9.8E-19 7.1E-23 146.6 11.3 84 3-86 5-94 (98)
29 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 1.3E-18 9.7E-23 140.9 11.6 77 6-83 2-78 (79)
30 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 3.9E-19 2.9E-23 143.7 8.2 75 8-83 1-75 (75)
31 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 2.8E-19 2.1E-23 153.0 7.2 80 6-86 18-97 (101)
32 d2cpea1 d.58.7.1 (A:353-453) R 99.8 1.4E-18 1E-22 146.6 10.9 85 3-87 5-97 (101)
33 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 1.4E-18 1E-22 149.2 10.9 81 6-87 20-100 (103)
34 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 3.6E-18 2.6E-22 143.3 13.1 82 4-87 9-90 (93)
35 d1cvja2 d.58.7.1 (A:91-179) Po 99.7 2.2E-18 1.6E-22 143.4 10.0 81 5-87 7-87 (89)
36 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.7 3.5E-18 2.6E-22 145.4 11.6 83 4-88 13-96 (104)
37 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 5.5E-19 4E-23 143.5 6.2 75 8-83 1-75 (75)
38 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 2E-18 1.5E-22 142.8 9.4 82 4-86 2-85 (86)
39 d2msta_ d.58.7.1 (A:) Neural R 99.7 1.5E-18 1.1E-22 138.9 7.9 75 8-83 1-75 (75)
40 d2f9da1 d.58.7.1 (A:12-125) Pr 99.7 5.7E-18 4.1E-22 146.2 12.3 80 3-85 4-83 (114)
41 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.7 9.6E-18 7E-22 141.0 12.0 80 4-86 12-91 (95)
42 d2cpxa1 d.58.7.1 (A:291-392) R 99.7 8.8E-19 6.4E-23 148.3 5.1 83 5-87 17-99 (102)
43 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.7 1.7E-18 1.2E-22 145.2 4.5 80 4-85 11-90 (91)
44 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.7 2.2E-17 1.6E-21 139.6 11.1 78 3-86 15-92 (96)
45 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.7 1.5E-17 1.1E-21 136.5 9.7 78 2-84 4-82 (83)
46 d2adca1 d.58.7.1 (A:335-443) P 99.7 2.9E-17 2.1E-21 140.3 11.2 76 6-86 2-78 (109)
47 d2cqpa1 d.58.7.1 (A:917-1002) 99.7 1.4E-17 9.9E-22 137.1 8.7 80 4-83 7-86 (86)
48 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 3.8E-17 2.8E-21 135.0 11.2 78 5-84 5-82 (85)
49 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 2.2E-17 1.6E-21 138.9 9.4 83 6-88 1-87 (96)
50 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.7 9.9E-18 7.2E-22 142.5 7.3 82 3-85 15-96 (101)
51 d1wg5a_ d.58.7.1 (A:) Heteroge 99.7 3.7E-17 2.7E-21 139.5 10.5 83 4-87 13-95 (104)
52 d2adca2 d.58.7.1 (A:444-531) P 99.7 3.6E-17 2.6E-21 135.2 10.1 78 4-85 8-86 (88)
53 d1fjca_ d.58.7.1 (A:) Nucleoli 99.7 2.8E-17 2E-21 138.4 9.1 79 4-87 14-92 (96)
54 d1wf2a_ d.58.7.1 (A:) Heteroge 99.7 4.9E-17 3.6E-21 138.0 10.3 74 5-86 14-88 (98)
55 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.7 2.3E-17 1.7E-21 136.9 7.9 78 3-87 2-79 (88)
56 d2cpia1 d.58.7.1 (A:101-189) E 99.7 3E-17 2.2E-21 136.8 8.2 77 5-81 7-89 (89)
57 d1weza_ d.58.7.1 (A:) Heteroge 99.7 4.1E-17 3E-21 138.9 8.7 82 3-87 12-93 (102)
58 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 1.2E-17 8.8E-22 133.0 4.9 71 9-79 1-71 (72)
59 d1whxa_ d.58.7.1 (A:) Probable 99.7 6.5E-17 4.7E-21 138.3 9.7 77 5-87 9-85 (111)
60 d2cpya1 d.58.7.1 (A:536-638) R 99.7 1.7E-17 1.2E-21 141.1 5.5 80 5-85 7-86 (103)
61 d2cpda1 d.58.7.1 (A:223-308) A 99.7 2.2E-16 1.6E-20 130.0 11.7 77 5-87 7-83 (86)
62 d1wg1a_ d.58.7.1 (A:) Probable 99.7 6.1E-17 4.4E-21 134.6 8.3 77 3-86 2-78 (88)
63 d2cpja1 d.58.7.1 (A:65-150) No 99.7 6.2E-17 4.5E-21 134.0 8.2 76 5-86 7-82 (86)
64 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.7 6.2E-17 4.5E-21 132.2 8.1 75 7-87 2-77 (80)
65 d3begb1 d.58.7.1 (B:121-207) S 99.7 1.8E-17 1.3E-21 137.3 4.7 74 7-87 1-74 (87)
66 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 6.6E-17 4.8E-21 134.7 8.1 79 5-86 2-84 (91)
67 d2ghpa2 d.58.7.1 (A:41-115) U4 99.6 3.1E-16 2.2E-20 126.7 10.7 74 7-83 1-74 (75)
68 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.6 1.7E-16 1.2E-20 129.1 8.6 76 3-86 2-77 (79)
69 d1whya_ d.58.7.1 (A:) Putative 99.6 2.9E-16 2.1E-20 132.4 10.1 78 4-87 15-94 (97)
70 d2cq1a1 d.58.7.1 (A:51-138) Po 99.6 5.3E-16 3.9E-20 128.3 11.1 80 1-86 3-84 (88)
71 d1wg4a_ d.58.7.1 (A:) Splicing 99.6 3.3E-16 2.4E-20 132.8 9.1 76 5-87 14-89 (98)
72 d2adba1 d.58.7.1 (A:177-284) P 99.6 4.1E-16 3E-20 133.8 9.5 81 3-87 4-86 (108)
73 d1wexa_ d.58.7.1 (A:) Heteroge 99.6 1.4E-15 1E-19 129.7 11.8 79 3-87 12-92 (104)
74 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.6 1.1E-15 8.2E-20 123.4 9.7 71 9-86 1-71 (75)
75 d1u1qa_ d.58.7.1 (A:) Nuclear 99.6 3E-15 2.2E-19 137.0 11.9 82 4-86 95-176 (183)
76 d1wela1 d.58.7.1 (A:412-523) R 99.6 4.5E-16 3.3E-20 134.7 5.2 80 5-85 17-96 (112)
77 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.6 1.9E-15 1.4E-19 128.1 7.4 77 4-86 16-95 (99)
78 d1x4da1 d.58.7.1 (A:8-96) Matr 99.5 8.2E-15 6E-19 122.0 9.5 78 3-86 5-85 (89)
79 d1u2fa_ d.58.7.1 (A:) Splicing 99.5 6.7E-17 4.9E-21 134.1 -3.6 76 7-83 2-82 (90)
80 d1weya_ d.58.7.1 (A:) Calcipre 99.5 3.1E-14 2.2E-18 122.1 8.9 79 3-87 2-85 (104)
81 d1jmta_ d.58.7.3 (A:) d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.84 E-value=9.2e-21 Score=169.58 Aligned_cols=83 Identities=33% Similarity=0.586 Sum_probs=79.4
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||+|||+++||++|+++|+.||.|++|+++.|+.||+++|||||+|.+.++|.+|++.||++.|+||+|+|++|.
T Consensus 41 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 41 VLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAA 120 (139)
T ss_dssp TTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
.+.
T Consensus 121 ~~~ 123 (139)
T d1u6fa1 121 SGH 123 (139)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 2
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.83 E-value=1.2e-20 Score=154.18 Aligned_cols=80 Identities=28% Similarity=0.572 Sum_probs=77.8
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
+++|||+|||+++||++|+++|++||.|+++++++|+.+|+++|||||+|.+.++|++|++.||+..|+|+.|+|+||++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999975
No 3
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.2e-20 Score=157.22 Aligned_cols=83 Identities=27% Similarity=0.490 Sum_probs=79.6
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||+|||++++|++|+++|+.||.|++|++++|+.||+++|||||+|.+.++|++|++.||+..|+|+.|+|++|+
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
+.+
T Consensus 84 p~~ 86 (89)
T d2cqba1 84 PMR 86 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 4
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=3.3e-20 Score=157.22 Aligned_cols=85 Identities=33% Similarity=0.484 Sum_probs=81.0
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
+..+++|||+|||++++|++|+++|++||.|++|++++|+.||+++|||||+|.+.++|.+|++.||+..|+||.|+|++
T Consensus 5 ~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~ 84 (99)
T d1whwa_ 5 SSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 84 (99)
T ss_dssp CCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC
Q 008851 83 AENDK 87 (551)
Q Consensus 83 A~~~~ 87 (551)
+..+.
T Consensus 85 a~~~~ 89 (99)
T d1whwa_ 85 STIKK 89 (99)
T ss_dssp CCCCS
T ss_pred CCCCC
Confidence 98754
No 5
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=5.1e-20 Score=154.85 Aligned_cols=83 Identities=25% Similarity=0.464 Sum_probs=79.7
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
..+++|||+|||+++||++|+++|+.||.|.+|+++.|+.+|+++|||||+|.+.++|..|++.||+..|+|+.|+|+|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC
Q 008851 84 END 86 (551)
Q Consensus 84 ~~~ 86 (551)
...
T Consensus 85 ~~~ 87 (93)
T d1h2vz_ 85 AGF 87 (93)
T ss_dssp SCC
T ss_pred CCC
Confidence 753
No 6
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.9e-20 Score=157.49 Aligned_cols=85 Identities=33% Similarity=0.522 Sum_probs=80.9
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
.+..++|||+|||+++|+++|+++|++||.|++|++++|+.||+++|||||+|.+.++|++|++.||+..|+|+.|+|+|
T Consensus 6 ~~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ 85 (93)
T d1x5ua1 6 RNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNK 85 (93)
T ss_dssp CCTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC
Q 008851 83 AENDK 87 (551)
Q Consensus 83 A~~~~ 87 (551)
|+++.
T Consensus 86 A~~~~ 90 (93)
T d1x5ua1 86 ASAHN 90 (93)
T ss_dssp TTTTS
T ss_pred cCCCC
Confidence 98654
No 7
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5e-20 Score=150.22 Aligned_cols=80 Identities=29% Similarity=0.548 Sum_probs=77.2
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
.++|||+|||++++|++|+++|++||.|.+|++++|+.+|+++|||||+|.+.++|++|++.|||..|+|+.|+|+||++
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999975
No 8
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=3.5e-20 Score=158.38 Aligned_cols=86 Identities=23% Similarity=0.512 Sum_probs=81.4
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
.+++++|||+|||++++|++|+++|+.||.|+++++++|+.+|++||||||+|.+.++|..|++.||++.|+|+.|+|+|
T Consensus 15 ~p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~ 94 (102)
T d2cpza1 15 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQL 94 (102)
T ss_dssp CSTTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEEC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCC
Q 008851 83 AENDKG 88 (551)
Q Consensus 83 A~~~~~ 88 (551)
|+++..
T Consensus 95 a~~k~~ 100 (102)
T d2cpza1 95 KRSKND 100 (102)
T ss_dssp CCCSCC
T ss_pred eCCCCC
Confidence 987543
No 9
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.81 E-value=5.9e-20 Score=152.83 Aligned_cols=83 Identities=33% Similarity=0.539 Sum_probs=79.1
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
.++++|||+|||+++|+++|+++|+.||.|++|++++|+.||+++|||||+|.+.++|++|++.|||..|+|+.|+|+||
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a 84 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWC 84 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC
Q 008851 84 END 86 (551)
Q Consensus 84 ~~~ 86 (551)
.++
T Consensus 85 ~~k 87 (88)
T d1rk8a_ 85 FVK 87 (88)
T ss_dssp EEC
T ss_pred cCC
Confidence 763
No 10
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5.9e-20 Score=150.08 Aligned_cols=78 Identities=26% Similarity=0.466 Sum_probs=76.0
Q ss_pred EEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 8 tVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
+|||||||+++||++|+++|+.||+|.+|+|++|+.||+++|||||+|.+.++|..|++.|+|..++||.|+|+||+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999864
No 11
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=8e-20 Score=152.44 Aligned_cols=83 Identities=27% Similarity=0.466 Sum_probs=79.8
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
.+.++|||+|||++++|++|+++|+.||.|.+|++++|+.||+++|||||+|.+.++|.+|++.|++..|+|+.|+|+||
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC
Q 008851 84 END 86 (551)
Q Consensus 84 ~~~ 86 (551)
+++
T Consensus 86 kp~ 88 (90)
T d2cq0a1 86 KPS 88 (90)
T ss_dssp SCC
T ss_pred eCC
Confidence 864
No 12
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.8e-20 Score=160.03 Aligned_cols=83 Identities=75% Similarity=1.157 Sum_probs=79.2
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
.++|||+|||++++|++|+++|+.||.|.+|++++|+.||+++|||||+|.+.++|.+|++.|++..|+|+.|+|++|..
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCC
Q 008851 86 DKG 88 (551)
Q Consensus 86 ~~~ 88 (551)
...
T Consensus 88 ~~~ 90 (104)
T d1p1ta_ 88 EKN 90 (104)
T ss_dssp TTH
T ss_pred CCC
Confidence 543
No 13
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=8.4e-20 Score=151.76 Aligned_cols=83 Identities=30% Similarity=0.597 Sum_probs=79.3
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
+.++|||||||++++|++|+++|+.||.|..+.+++++.+|+++|||||+|.+.++|++|++.|+++.|+|+.|+|++|.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 56779999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
+..
T Consensus 84 ~~~ 86 (90)
T d1x5sa1 84 KSS 86 (90)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 14
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.5e-19 Score=153.31 Aligned_cols=82 Identities=30% Similarity=0.531 Sum_probs=76.8
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||+|||++++|++|+++|+.||.|++|++++|+.||+++|||||+|.+.++|++|++.+++ .|+||.|+|++|.
T Consensus 9 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 9 TFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp SSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred CCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 346799999999999999999999999999999999999999999999999999999999998875 7999999999998
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
...
T Consensus 88 ~~~ 90 (103)
T d2cqda1 88 LGA 90 (103)
T ss_dssp TTC
T ss_pred CCC
Confidence 643
No 15
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.9e-19 Score=148.79 Aligned_cols=81 Identities=23% Similarity=0.427 Sum_probs=76.7
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
....++|||||||+++||++|+++|+.||.|.++++++|+.||+++|||||+|.+.++|++|++ ++++.|+||.|+|+.
T Consensus 3 pe~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~ 81 (84)
T d1l3ka1 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKR 81 (84)
T ss_dssp CGGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEE
T ss_pred CCCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEe
Confidence 4456899999999999999999999999999999999999999999999999999999999996 689999999999998
Q ss_pred ec
Q 008851 83 AE 84 (551)
Q Consensus 83 A~ 84 (551)
|.
T Consensus 82 A~ 83 (84)
T d1l3ka1 82 AV 83 (84)
T ss_dssp CC
T ss_pred ee
Confidence 85
No 16
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.6e-19 Score=148.07 Aligned_cols=77 Identities=26% Similarity=0.562 Sum_probs=74.6
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEE
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRV 80 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV 80 (551)
.++++|||+|||+++||++|+++|++||.|.+|++++|+.||+++|||||+|.+.++|.+|++.||+..|+||+|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999987
No 17
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=6.4e-20 Score=151.82 Aligned_cols=80 Identities=34% Similarity=0.602 Sum_probs=77.4
Q ss_pred cEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecCC
Q 008851 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEND 86 (551)
Q Consensus 7 rtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~~ 86 (551)
.+|||+|||+++||++|+++|+.||+|++|++++|+.||+++|||||+|.+.++|..|++.||++.|+|+.|+|++|...
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999864
No 18
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.79 E-value=1.9e-19 Score=148.44 Aligned_cols=80 Identities=30% Similarity=0.489 Sum_probs=76.3
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCC--EEEEEE
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEING--RQLRVD 81 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~G--R~LrV~ 81 (551)
...++|||+|||++++|++|+++|++||.|.++++++|+.+|+++|||||+|.+.++|.+|++.||+..+.| ++|+|+
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 456789999999999999999999999999999999999999999999999999999999999999999976 889999
Q ss_pred ee
Q 008851 82 FA 83 (551)
Q Consensus 82 ~A 83 (551)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 97
No 19
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=4.3e-19 Score=148.84 Aligned_cols=82 Identities=24% Similarity=0.435 Sum_probs=76.5
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
...++|||+|||+++||++|+++|+.||.|.+|+|++|+.||++||||||+|.+.++|++|++. .+.|+||.|+|++|
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeC
Confidence 3578899999999999999999999999999999999999999999999999999999999985 45899999999999
Q ss_pred cCCC
Q 008851 84 ENDK 87 (551)
Q Consensus 84 ~~~~ 87 (551)
.++.
T Consensus 84 ~~k~ 87 (90)
T d2cqga1 84 NSKQ 87 (90)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 8754
No 20
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.8e-19 Score=148.91 Aligned_cols=80 Identities=25% Similarity=0.515 Sum_probs=75.8
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCC--EEEEEE
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEING--RQLRVD 81 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~G--R~LrV~ 81 (551)
-.+++|||+|||+++||++|+++|++||.|+++++++|+.+|+++|||||+|.+.++|.+|++.|||..++| ++|+|+
T Consensus 4 ~k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 4 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp GTTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 356889999999999999999999999999999999999999999999999999999999999999999988 559999
Q ss_pred ee
Q 008851 82 FA 83 (551)
Q Consensus 82 ~A 83 (551)
||
T Consensus 84 ~A 85 (85)
T d1fxla2 84 FA 85 (85)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 21
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=2e-19 Score=146.63 Aligned_cols=80 Identities=14% Similarity=0.250 Sum_probs=70.4
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
+++|||+|||+++||++|+++|+.||.|..+.++.++.+|+++|||||+|.+.++|.+|++.||+..++|++|+|+++++
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 47999999999999999999999999999999988989999999999999999999999999999999999999999975
No 22
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6.3e-19 Score=146.94 Aligned_cols=84 Identities=25% Similarity=0.547 Sum_probs=77.6
Q ss_pred CCCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEE
Q 008851 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVD 81 (551)
Q Consensus 2 a~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~ 81 (551)
++.+.++|||+|||+++||++|+++|+.||.|++|+++.|+.++ +|||||+|.+.++|.+|++.|++..|+|+.|+|+
T Consensus 4 d~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~ 81 (90)
T d2cqia1 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVN 81 (90)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 44578999999999999999999999999999999999987654 7999999999999999999999999999999999
Q ss_pred eecCCC
Q 008851 82 FAENDK 87 (551)
Q Consensus 82 ~A~~~~ 87 (551)
||++..
T Consensus 82 ~a~~~~ 87 (90)
T d2cqia1 82 WATTPS 87 (90)
T ss_dssp ECCCTT
T ss_pred EcCCCC
Confidence 998643
No 23
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=3.4e-19 Score=150.05 Aligned_cols=84 Identities=25% Similarity=0.509 Sum_probs=78.4
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecC-CCCCcceEEEEEeCCHHHHHHHHHHh-CCceeCCEEEEEE
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDR-ETGKPKGYGFCEYKDEETALSARRNL-QGYEINGRQLRVD 81 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr-~TGksKGyAFVEF~d~e~A~sAi~~L-ng~~I~GR~LrV~ 81 (551)
..+++|||+|||++++|++|+++|+.||.|.+|+|+.|+ .+|+++|||||+|.+.++|.+|++.| |+..|+||+|+|+
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~ 85 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLE 85 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEE
Confidence 367889999999999999999999999999999999885 48999999999999999999999998 8999999999999
Q ss_pred eecCCC
Q 008851 82 FAENDK 87 (551)
Q Consensus 82 ~A~~~~ 87 (551)
||+.+.
T Consensus 86 ~A~~~~ 91 (94)
T d2cpha1 86 WADSEV 91 (94)
T ss_dssp ECCCCC
T ss_pred EcCCCC
Confidence 998754
No 24
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.8e-19 Score=146.45 Aligned_cols=79 Identities=23% Similarity=0.476 Sum_probs=74.8
Q ss_pred EEEecCCCCCCHHHHHHHHHcCCCeeEE-EEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecCCC
Q 008851 9 VFVGNIPYDATEEQLIEICREVGPVVSF-RLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDK 87 (551)
Q Consensus 9 VFVGNLP~d~TEEeLre~Fs~~G~V~~v-rLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~~~ 87 (551)
|||+|||+++||++|+++|++||.|.++ ++++|+.||+++|||||+|.+.++|++|++.|++..++|++|+|++|.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999999765 789999999999999999999999999999999999999999999998643
No 25
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=6.2e-19 Score=143.43 Aligned_cols=77 Identities=19% Similarity=0.447 Sum_probs=74.2
Q ss_pred EEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 8 tVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
+|||+|||++++|++|+++|++||.|.+|++.+|+ +|+++|||||+|.+.++|.+|++.|||..++|+.|+|++|.+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 69999999999999999999999999999999996 799999999999999999999999999999999999999863
No 26
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.1e-19 Score=148.16 Aligned_cols=76 Identities=21% Similarity=0.381 Sum_probs=73.6
Q ss_pred cEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 7 rtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
|+|||+|||+++||++|+++|++||.|+++++++|+.||++||||||+|.+.++|++|++ ++++.|+||.|+|++|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 689999999999999999999999999999999999999999999999999999999996 6999999999999987
No 27
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=8.8e-19 Score=144.05 Aligned_cols=77 Identities=32% Similarity=0.596 Sum_probs=73.1
Q ss_pred EEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCC---CcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETG---KPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 9 VFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TG---ksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
|||+|||+++|+++|+++|+.||.|.+|++++|+.++ ++||||||+|.+.++|.+|++.||+..|+|+.|+|+||+.
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999999998776 4689999999999999999999999999999999999864
No 28
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=9.8e-19 Score=146.60 Aligned_cols=84 Identities=30% Similarity=0.557 Sum_probs=78.7
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhC------CceeCCE
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ------GYEINGR 76 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Ln------g~~I~GR 76 (551)
..+.++|||||||+++||++|+++|+.||.|.+++++.++.+++++|||||+|.+.++|.+|++.|+ +..|+||
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr 84 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGR 84 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSC
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCE
Confidence 3467899999999999999999999999999999999999999999999999999999999999886 6788999
Q ss_pred EEEEEeecCC
Q 008851 77 QLRVDFAEND 86 (551)
Q Consensus 77 ~LrV~~A~~~ 86 (551)
.|+|++|.++
T Consensus 85 ~l~v~~a~~k 94 (98)
T d1x4ha1 85 QLKVDLAVTR 94 (98)
T ss_dssp EEEEECCCCC
T ss_pred EEEEEECCCC
Confidence 9999999864
No 29
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.3e-18 Score=140.88 Aligned_cols=77 Identities=25% Similarity=0.439 Sum_probs=73.8
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
-++|||||||+++||++|+++|++||.|..+.+..|+.+++++|||||+|.+.+++.+|++ ++++.|+||.|+|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 4789999999999999999999999999999999999999999999999999999999985 8999999999999987
No 30
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=3.9e-19 Score=143.75 Aligned_cols=75 Identities=27% Similarity=0.525 Sum_probs=71.8
Q ss_pred EEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 8 tVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
+|||||||++++|++|+++|++||.|.++++++|+.||+++|||||+|.+.++|++|++ ++++.|+|+.|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 59999999999999999999999999999999999999999999999999999999996 7999999999999765
No 31
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2.8e-19 Score=152.97 Aligned_cols=80 Identities=23% Similarity=0.373 Sum_probs=76.4
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
.++|||+|||++++|++|+++|+.||.|.+|+|++|+.||++||||||+|.+.++|.+|++ |||..|+|+.|+|+++..
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCC
Confidence 5789999999999999999999999999999999999999999999999999999999995 999999999999999864
Q ss_pred C
Q 008851 86 D 86 (551)
Q Consensus 86 ~ 86 (551)
+
T Consensus 97 ~ 97 (101)
T d2cq4a1 97 E 97 (101)
T ss_dssp H
T ss_pred C
Confidence 3
No 32
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.4e-18 Score=146.63 Aligned_cols=85 Identities=28% Similarity=0.498 Sum_probs=78.5
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCee--------EEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeC
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVV--------SFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEIN 74 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~--------~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~ 74 (551)
+...++|||+|||+++||++|+++|+.||.|. .+.+..|+.+|+++|||||+|.+.++|.+|++.|||+.|+
T Consensus 5 ~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~ 84 (101)
T d2cpea1 5 DSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQ 84 (101)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEEC
Confidence 45678999999999999999999999999874 5777888999999999999999999999999999999999
Q ss_pred CEEEEEEeecCCC
Q 008851 75 GRQLRVDFAENDK 87 (551)
Q Consensus 75 GR~LrV~~A~~~~ 87 (551)
||.|+|++|+.+.
T Consensus 85 gr~i~V~~a~~~~ 97 (101)
T d2cpea1 85 GSKLKVSLARKKP 97 (101)
T ss_dssp TEECEEECSSCCC
T ss_pred CEEEEEEEcCCCC
Confidence 9999999998643
No 33
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.4e-18 Score=149.22 Aligned_cols=81 Identities=21% Similarity=0.401 Sum_probs=76.8
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
.++|||||||++++|++|+++|++||.|.++.|.+|+.|++++|||||+|.+.++|.+|++ ++++.|+|+.|+|++|.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 4789999999999999999999999999999999999999999999999999999999995 799999999999999986
Q ss_pred CC
Q 008851 86 DK 87 (551)
Q Consensus 86 ~~ 87 (551)
+.
T Consensus 99 ke 100 (103)
T d1x4ba1 99 RE 100 (103)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 34
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=3.6e-18 Score=143.28 Aligned_cols=82 Identities=24% Similarity=0.519 Sum_probs=76.3
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
...++|||+|||+++++++|+++|+.||.|++|++++|+ +.++|||||+|.+.++|.+|++.||+..|+|+.|+|++|
T Consensus 9 ~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A 86 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 86 (93)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 357889999999999999999999999999999999886 447999999999999999999999999999999999999
Q ss_pred cCCC
Q 008851 84 ENDK 87 (551)
Q Consensus 84 ~~~~ 87 (551)
+++.
T Consensus 87 ~~r~ 90 (93)
T d2cq3a1 87 TARV 90 (93)
T ss_dssp CSSC
T ss_pred CcCC
Confidence 8753
No 35
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.2e-18 Score=143.36 Aligned_cols=81 Identities=25% Similarity=0.438 Sum_probs=75.2
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
...+|||+|||+++++++|+++|+.||.|.+|+++.|+. .++|||||+|.+.++|.+|++.|||..|+|+.|+|++|+
T Consensus 7 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~--~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 7 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp TTTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTT--BCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecC--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 456899999999999999999999999999999999864 478999999999999999999999999999999999998
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
++.
T Consensus 85 ~~~ 87 (89)
T d1cvja2 85 SRK 87 (89)
T ss_dssp CTT
T ss_pred CCC
Confidence 643
No 36
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=3.5e-18 Score=145.42 Aligned_cols=83 Identities=33% Similarity=0.614 Sum_probs=74.1
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecC-CCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDR-ETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr-~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
.+.++|||+|||+++||++|+++|+.|| +++++++.++ .+|+++|||||+|.+.++|++|+ .||++.|+||.|+|++
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~ 90 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDV 90 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEE
Confidence 3568999999999999999999999999 8888887765 57899999999999999998776 6999999999999999
Q ss_pred ecCCCC
Q 008851 83 AENDKG 88 (551)
Q Consensus 83 A~~~~~ 88 (551)
|.++..
T Consensus 91 a~~~~~ 96 (104)
T d1wi8a_ 91 ADQAQD 96 (104)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 986543
No 37
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.5e-19 Score=143.53 Aligned_cols=75 Identities=27% Similarity=0.410 Sum_probs=71.4
Q ss_pred EEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 8 tVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
+|||||||+++||++|+++|++||.|++|+|++|+.||+++|||||+|.+.++|++|++ .+++.|+|+.|+|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 69999999999999999999999999999999999999999999999999999999996 4778999999999875
No 38
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=2e-18 Score=142.81 Aligned_cols=82 Identities=16% Similarity=0.289 Sum_probs=71.9
Q ss_pred CCCcEEEEecCCCCCC-HHHHHHHHHcCCCeeEEEEee-cCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEE
Q 008851 4 SQHRCVFVGNIPYDAT-EEQLIEICREVGPVVSFRLVI-DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVD 81 (551)
Q Consensus 4 ~~srtVFVGNLP~d~T-EEeLre~Fs~~G~V~~vrLv~-Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~ 81 (551)
-+.++|||+|||++++ |++|+++|++||.|++|+|.. ++.+|+++|||||+|.+.++|.+|++ +|++.|+||.|+|+
T Consensus 2 ~e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~ 80 (86)
T d2ghpa3 2 LEGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVS 80 (86)
T ss_dssp CTTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEE
T ss_pred CCCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEE
Confidence 3678999999999986 566999999999999999876 46799999999999999999999995 99999999999999
Q ss_pred eecCC
Q 008851 82 FAEND 86 (551)
Q Consensus 82 ~A~~~ 86 (551)
+|+++
T Consensus 81 ~a~~k 85 (86)
T d2ghpa3 81 LADKK 85 (86)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 99854
No 39
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=1.5e-18 Score=138.95 Aligned_cols=75 Identities=24% Similarity=0.436 Sum_probs=72.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 8 tVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
+|||||||+++||++|+++|+.||.|..+.++.++.+|+++|||||+|.+.++|++|++ +|++.|+||.|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 59999999999999999999999999999999999999999999999999999999996 9999999999999986
No 40
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.7e-18 Score=146.19 Aligned_cols=80 Identities=26% Similarity=0.482 Sum_probs=74.6
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
+..+++|||+|||+++++++|+++|+.||.|++|++.. +++++|||||+|.+.++|..|++.|||+.|+|+.|+|++
T Consensus 4 p~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~---~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~ 80 (114)
T d2f9da1 4 PEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGN---TPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 80 (114)
T ss_dssp TTCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEC---STTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred cCCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccc---cCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 45678999999999999999999999999999999875 467799999999999999999999999999999999999
Q ss_pred ecC
Q 008851 83 AEN 85 (551)
Q Consensus 83 A~~ 85 (551)
+..
T Consensus 81 a~~ 83 (114)
T d2f9da1 81 YNA 83 (114)
T ss_dssp CCH
T ss_pred cCC
Confidence 864
No 41
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=9.6e-18 Score=140.98 Aligned_cols=80 Identities=24% Similarity=0.467 Sum_probs=73.6
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
..+++|||+|||+++++++|+++|+.||.|+.+++..+ +..+|||||+|.+.++|+.|++.||++.|+|++|+|+||
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a 88 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFP 88 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEec
Confidence 46789999999999999999999999999999987643 567899999999999999999999999999999999998
Q ss_pred cCC
Q 008851 84 END 86 (551)
Q Consensus 84 ~~~ 86 (551)
+..
T Consensus 89 ~~~ 91 (95)
T d1x4aa1 89 RSG 91 (95)
T ss_dssp CCC
T ss_pred cCC
Confidence 754
No 42
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=8.8e-19 Score=148.33 Aligned_cols=83 Identities=22% Similarity=0.425 Sum_probs=79.5
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
++++|||+|||.++++++|+++|+.||.|+.+.++.++.+|+++|||||+|.+.++|..|++.|||..|+|+.|+|+||+
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
++.
T Consensus 97 ~k~ 99 (102)
T d2cpxa1 97 NKK 99 (102)
T ss_dssp CCS
T ss_pred Ccc
Confidence 643
No 43
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.71 E-value=1.7e-18 Score=145.23 Aligned_cols=80 Identities=18% Similarity=0.336 Sum_probs=74.4
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
...++|||+|||++++|++|+++|+.||.|.+++++.+ .+|+++|||||+|.+.++|.+|++ ||+..|+|+.|+|++|
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~a 88 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKP 88 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECC
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEec
Confidence 35679999999999999999999999999999988755 589999999999999999999996 9999999999999999
Q ss_pred cC
Q 008851 84 EN 85 (551)
Q Consensus 84 ~~ 85 (551)
+.
T Consensus 89 k~ 90 (91)
T d1fjeb1 89 KG 90 (91)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 44
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2.2e-17 Score=139.63 Aligned_cols=78 Identities=22% Similarity=0.454 Sum_probs=72.9
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
.+..++|||+|||.+++|++|+++|+.||.|++|+++.| ||||||+|.+.++|.+|++.||+..|+|+.|+|+|
T Consensus 15 ~~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ 88 (96)
T d1x4ga1 15 SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW 88 (96)
T ss_dssp CSSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEC
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 345689999999999999999999999999999999865 78999999999999999999999999999999999
Q ss_pred ecCC
Q 008851 83 AEND 86 (551)
Q Consensus 83 A~~~ 86 (551)
+++.
T Consensus 89 ak~~ 92 (96)
T d1x4ga1 89 GKES 92 (96)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8764
No 45
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.70 E-value=1.5e-17 Score=136.52 Aligned_cols=78 Identities=24% Similarity=0.455 Sum_probs=72.3
Q ss_pred CCCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCcee-CCEEEEE
Q 008851 2 ASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEI-NGRQLRV 80 (551)
Q Consensus 2 a~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I-~GR~LrV 80 (551)
+++++++|||+|||+++++++|+++|+.||.|++|+++.++ +|||||+|.+.++|.+|++.|||+.| +|+.|+|
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v 78 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKITPTHAMKI 78 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEE
Confidence 46789999999999999999999999999999999998653 78999999999999999999999988 5789999
Q ss_pred Eeec
Q 008851 81 DFAE 84 (551)
Q Consensus 81 ~~A~ 84 (551)
+||+
T Consensus 79 ~~ak 82 (83)
T d2b0ga1 79 TFAK 82 (83)
T ss_dssp EECC
T ss_pred EEec
Confidence 9986
No 46
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2.9e-17 Score=140.26 Aligned_cols=76 Identities=18% Similarity=0.380 Sum_probs=70.8
Q ss_pred CcEEEEecCCC-CCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 6 HRCVFVGNIPY-DATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 6 srtVFVGNLP~-d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
+++|||+||++ .+||++|+++|+.||.|++|+|++|+ +|||||+|++.++|.+|++.||+..|+|+.|+|+|++
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 68999999965 59999999999999999999999875 7999999999999999999999999999999999987
Q ss_pred CC
Q 008851 85 ND 86 (551)
Q Consensus 85 ~~ 86 (551)
..
T Consensus 77 ~~ 78 (109)
T d2adca1 77 HQ 78 (109)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 47
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=1.4e-17 Score=137.11 Aligned_cols=80 Identities=15% Similarity=0.294 Sum_probs=72.6
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
+..++|||+|||++++|++|+++|+.||.|..+.++.+.++|+++|||||+|.+.++|.+|++.||+..|+||+|+|+++
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 45677999999999999999999999999987544555578999999999999999999999999999999999999975
No 48
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=3.8e-17 Score=135.03 Aligned_cols=78 Identities=22% Similarity=0.308 Sum_probs=73.3
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||+|||+++|+++|+++|+.||.|.+|++..++ +|++||||||+|.+.++|.+|++ +++..++|+.|+|.+++
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 46899999999999999999999999999999998875 89999999999999999999995 79999999999999865
No 49
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2.2e-17 Score=138.88 Aligned_cols=83 Identities=29% Similarity=0.484 Sum_probs=74.6
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCC-eeEEEEeecC-CCCCcceEEEEEeCCHHHHHHHHHHhCC--ceeCCEEEEEE
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGP-VVSFRLVIDR-ETGKPKGYGFCEYKDEETALSARRNLQG--YEINGRQLRVD 81 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~-V~~vrLv~Dr-~TGksKGyAFVEF~d~e~A~sAi~~Lng--~~I~GR~LrV~ 81 (551)
+|+|||||||.+++|++|+++|+.||+ |.+++++.|. .+|+++|||||+|.+.++|.+|++.|++ ..++|+.|+|+
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 478999999999999999999999996 8999999885 5789999999999999999999999864 56689999999
Q ss_pred eecCCCC
Q 008851 82 FAENDKG 88 (551)
Q Consensus 82 ~A~~~~~ 88 (551)
||++...
T Consensus 81 ~A~p~~~ 87 (96)
T d2disa1 81 WAEPEID 87 (96)
T ss_dssp ESCSSCS
T ss_pred EcCCCCC
Confidence 9986543
No 50
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=9.9e-18 Score=142.55 Aligned_cols=82 Identities=21% Similarity=0.368 Sum_probs=75.6
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
..+.++|||+|||++++|++|+++|+.||.|..+++..+. +++++|||||+|.+.++|.+|++.|||..|.||+++|.+
T Consensus 15 ~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~ 93 (101)
T d1x5oa1 15 EQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAP 93 (101)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCC
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCC
Confidence 3456899999999999999999999999999999998885 799999999999999999999999999999999988877
Q ss_pred ecC
Q 008851 83 AEN 85 (551)
Q Consensus 83 A~~ 85 (551)
+++
T Consensus 94 ~~P 96 (101)
T d1x5oa1 94 TEP 96 (101)
T ss_dssp SSC
T ss_pred CCC
Confidence 653
No 51
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.7e-17 Score=139.49 Aligned_cols=83 Identities=14% Similarity=0.225 Sum_probs=76.1
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
..+.+|||+||||++||++|+++|+.+|.|..+.++.+..+++++|||||+|.+.++|++|++ +|+..|+||.|+|.++
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKS 91 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEEC
Confidence 356789999999999999999999999999988777888899999999999999999999995 8999999999999999
Q ss_pred cCCC
Q 008851 84 ENDK 87 (551)
Q Consensus 84 ~~~~ 87 (551)
....
T Consensus 92 ~~~~ 95 (104)
T d1wg5a_ 92 SRAE 95 (104)
T ss_dssp CTTT
T ss_pred CHHH
Confidence 8653
No 52
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.6e-17 Score=135.23 Aligned_cols=78 Identities=23% Similarity=0.316 Sum_probs=71.4
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCcee-CCEEEEEEe
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEI-NGRQLRVDF 82 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I-~GR~LrV~~ 82 (551)
+++++|||+|||++++|++|+++|+.||.|+++++.. ++.+|||||+|.+.++|.+|+..|||+.| +|+.|+|+|
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~----~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~ 83 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFF----QKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSF 83 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEEC----SSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEee----ecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEe
Confidence 5789999999999999999999999999999887764 44589999999999999999999999998 589999999
Q ss_pred ecC
Q 008851 83 AEN 85 (551)
Q Consensus 83 A~~ 85 (551)
++.
T Consensus 84 sk~ 86 (88)
T d2adca2 84 SKS 86 (88)
T ss_dssp CSS
T ss_pred CCC
Confidence 875
No 53
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.69 E-value=2.8e-17 Score=138.38 Aligned_cols=79 Identities=25% Similarity=0.452 Sum_probs=72.3
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
.+.++|||+|||+++||++|+++|+.||.|..++ .+|+++|||||+|.+.++|.+|++.||+..|+||.|+|+|+
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~-----~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a 88 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYT 88 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEE-----ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeee-----ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 3578999999999999999999999999887654 36889999999999999999999999999999999999999
Q ss_pred cCCC
Q 008851 84 ENDK 87 (551)
Q Consensus 84 ~~~~ 87 (551)
.++.
T Consensus 89 ~~k~ 92 (96)
T d1fjca_ 89 GEKG 92 (96)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 8654
No 54
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=4.9e-17 Score=138.02 Aligned_cols=74 Identities=26% Similarity=0.453 Sum_probs=68.3
Q ss_pred CCcEEEEecCC-CCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 5 QHRCVFVGNIP-YDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 5 ~srtVFVGNLP-~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
..++|||+||+ +.+++++|+++|++||.|++|++. ||||||+|.+.++|++|++.||++.|+|+.|+|+|+
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~--------rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 85 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH--------KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLA 85 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEE--------TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEET
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEe--------CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 46789999996 678899999999999999999983 799999999999999999999999999999999999
Q ss_pred cCC
Q 008851 84 END 86 (551)
Q Consensus 84 ~~~ 86 (551)
+..
T Consensus 86 ~~~ 88 (98)
T d1wf2a_ 86 AEP 88 (98)
T ss_dssp TSC
T ss_pred CCC
Confidence 754
No 55
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.3e-17 Score=136.90 Aligned_cols=78 Identities=27% Similarity=0.368 Sum_probs=70.0
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
+..+++|||+|||+++||++|+++|++||.|++|++. ..++|||||+|.+.++|++|+. +++.|+|+.|+|++
T Consensus 2 s~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~ 74 (88)
T d1wf0a_ 2 SSGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISN 74 (88)
T ss_dssp CSCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEEC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEe
Confidence 4578999999999999999999999999999999865 4468999999999999999985 77899999999999
Q ss_pred ecCCC
Q 008851 83 AENDK 87 (551)
Q Consensus 83 A~~~~ 87 (551)
|+++.
T Consensus 75 a~~k~ 79 (88)
T d1wf0a_ 75 AEPKH 79 (88)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 97643
No 56
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=3e-17 Score=136.79 Aligned_cols=77 Identities=18% Similarity=0.283 Sum_probs=71.3
Q ss_pred CCcEEEEecCCCCCCHHHH---HHHHHcCCCeeEEEEeecCCCCCcc---eEEEEEeCCHHHHHHHHHHhCCceeCCEEE
Q 008851 5 QHRCVFVGNIPYDATEEQL---IEICREVGPVVSFRLVIDRETGKPK---GYGFCEYKDEETALSARRNLQGYEINGRQL 78 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeL---re~Fs~~G~V~~vrLv~Dr~TGksK---GyAFVEF~d~e~A~sAi~~Lng~~I~GR~L 78 (551)
+.++|||+|||+++++++| +++|++||.|.+|.+.+|+.++..+ |||||+|.+.++|.+|++.|||..|+||.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 4678999999999999999 6789999999999999998777654 999999999999999999999999999999
Q ss_pred EEE
Q 008851 79 RVD 81 (551)
Q Consensus 79 rV~ 81 (551)
+|.
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 985
No 57
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=4.1e-17 Score=138.93 Aligned_cols=82 Identities=20% Similarity=0.338 Sum_probs=73.8
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
+...++|||+|||+++||++|+++|+.|| ++.++++++. +|+.+|||||+|.+.++|++|++ +|+..|+||.|+|.+
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFL 88 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 34678999999999999999999999998 5678888876 58999999999999999999986 899999999999999
Q ss_pred ecCCC
Q 008851 83 AENDK 87 (551)
Q Consensus 83 A~~~~ 87 (551)
+....
T Consensus 89 s~~~~ 93 (102)
T d1weza_ 89 NSTAG 93 (102)
T ss_dssp ECCCC
T ss_pred cCCCC
Confidence 88643
No 58
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.2e-17 Score=133.03 Aligned_cols=71 Identities=24% Similarity=0.568 Sum_probs=68.8
Q ss_pred EEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEE
Q 008851 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLR 79 (551)
Q Consensus 9 VFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~Lr 79 (551)
|||+|||+++||++|+++|+.||.|..+++..++.+++++|||||+|.+.++|.+|++.|||..|+||.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999999999999999999999999999999999999998764
No 59
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=6.5e-17 Score=138.26 Aligned_cols=77 Identities=16% Similarity=0.162 Sum_probs=70.9
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
.+++|||+|||+++++++|+++|+.||.|++|.|. +.+|||||+|.+.++|.+|++.|||..|.|+.|+|+|+.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~------~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP------EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC------SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee------ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 35789999999999999999999999999999874 347999999999999999999999999999999999997
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
...
T Consensus 83 ~~~ 85 (111)
T d1whxa_ 83 IGV 85 (111)
T ss_dssp TTT
T ss_pred CCc
Confidence 643
No 60
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.7e-17 Score=141.06 Aligned_cols=80 Identities=21% Similarity=0.378 Sum_probs=72.9
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
...+|||+|||+++|+++|+++|+.||.|..+.++.+..+|+++|||||+|.+.++|++|++ +|+..|+||.|+|.++.
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~ 85 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVT 85 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEEC
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECC
Confidence 45789999999999999999999999999876555666789999999999999999999995 89999999999999986
Q ss_pred C
Q 008851 85 N 85 (551)
Q Consensus 85 ~ 85 (551)
.
T Consensus 86 ~ 86 (103)
T d2cpya1 86 L 86 (103)
T ss_dssp H
T ss_pred H
Confidence 4
No 61
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.2e-16 Score=129.96 Aligned_cols=77 Identities=22% Similarity=0.403 Sum_probs=70.5
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||+|||++++|++|+++|+.||.|..+++. +++|||||+|.+.++|.+|+..||+..|+|+.|+|+||+
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~------~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~ak 80 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 80 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEE------ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEc------cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEecc
Confidence 45899999999999999999999999999887764 457999999999999999999999999999999999998
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
+..
T Consensus 81 P~~ 83 (86)
T d2cpda1 81 PVD 83 (86)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 62
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=6.1e-17 Score=134.62 Aligned_cols=77 Identities=21% Similarity=0.350 Sum_probs=67.9
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
.+.+++|||+|||+++++++|+++|+.|| ++.+.+ ++.+|||||+|.+.++|++|++.||++.|+|++|+|++
T Consensus 2 ~s~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~ 74 (88)
T d1wg1a_ 2 SSGSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQL 74 (88)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEE
T ss_pred CCCCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 35678999999999999999999999999 333332 45689999999999999999999999999999999999
Q ss_pred ecCC
Q 008851 83 AEND 86 (551)
Q Consensus 83 A~~~ 86 (551)
++.+
T Consensus 75 a~~~ 78 (88)
T d1wg1a_ 75 QPTD 78 (88)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9654
No 63
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=6.2e-17 Score=134.01 Aligned_cols=76 Identities=34% Similarity=0.540 Sum_probs=71.3
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||+|||+++++++|+++|+.||.|.+|++..+ +|||||+|.+.++|.+|++.|||..|+|+.|+|+||.
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~ 80 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC 80 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 4578999999999999999999999999999999755 6899999999999999999999999999999999998
Q ss_pred CC
Q 008851 85 ND 86 (551)
Q Consensus 85 ~~ 86 (551)
..
T Consensus 81 ~~ 82 (86)
T d2cpja1 81 HS 82 (86)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 64
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=6.2e-17 Score=132.16 Aligned_cols=75 Identities=24% Similarity=0.513 Sum_probs=68.0
Q ss_pred cEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCc-eeCCEEEEEEeecC
Q 008851 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGY-EINGRQLRVDFAEN 85 (551)
Q Consensus 7 rtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~-~I~GR~LrV~~A~~ 85 (551)
++|||||||+++||++|+++|++||.|.++++..+ +|||||+|.+.++|.+|++.|||. .|+|+.|+|+||.+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 36999999999999999999999999987776643 799999999999999999999985 79999999999987
Q ss_pred CC
Q 008851 86 DK 87 (551)
Q Consensus 86 ~~ 87 (551)
+.
T Consensus 76 k~ 77 (80)
T d2cqha1 76 KK 77 (80)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 65
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.8e-17 Score=137.27 Aligned_cols=74 Identities=20% Similarity=0.263 Sum_probs=68.2
Q ss_pred cEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecCC
Q 008851 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEND 86 (551)
Q Consensus 7 rtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~~ 86 (551)
.+|||+|||+++++++|+++|++||.|.++++.. +|||||+|.+.++|++|++.||+..|+|+.|+|.+++..
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR-------DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECT-------TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhcccccccccc-------cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 3699999999999999999999999999999864 389999999999999999999999999999999988654
Q ss_pred C
Q 008851 87 K 87 (551)
Q Consensus 87 ~ 87 (551)
.
T Consensus 74 ~ 74 (87)
T d3begb1 74 V 74 (87)
T ss_dssp E
T ss_pred c
Confidence 3
No 66
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=6.6e-17 Score=134.75 Aligned_cols=79 Identities=20% Similarity=0.465 Sum_probs=72.1
Q ss_pred CCcEEEEecCCCCCCHHHHHH----HHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEE
Q 008851 5 QHRCVFVGNIPYDATEEQLIE----ICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRV 80 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre----~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV 80 (551)
++++|||+|||+++++++|++ +|++||.|.+|++.. +++++|||||+|.+.++|.+|++.+|+..++|+.|+|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 679999999999999998864 589999999988753 5788999999999999999999999999999999999
Q ss_pred EeecCC
Q 008851 81 DFAEND 86 (551)
Q Consensus 81 ~~A~~~ 86 (551)
+||+.+
T Consensus 79 ~~ak~~ 84 (91)
T d1nu4a_ 79 QYAKTD 84 (91)
T ss_dssp EECSSC
T ss_pred EEeCCC
Confidence 999864
No 67
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.65 E-value=3.1e-16 Score=126.73 Aligned_cols=74 Identities=15% Similarity=0.248 Sum_probs=68.4
Q ss_pred cEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 7 rtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
++|||+|||+++++++|+++|+.||.|.++++..|+++ .+|||||+|.+.++|.+|+ .+++..|+|+.|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKK--NFRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTS--SSEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccc--cceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEEC
Confidence 47999999999999999999999999999999998753 4589999999999999999 48999999999999875
No 68
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.7e-16 Score=129.06 Aligned_cols=76 Identities=20% Similarity=0.301 Sum_probs=69.7
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEe
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDF 82 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~ 82 (551)
....++|||+|++ +||++|+++|++||.|.+|++..+ +|||||+|.+.++|.+|++.||+..|+|+.|+|+|
T Consensus 2 p~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~ 73 (79)
T d2bz2a1 2 PRKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNI 73 (79)
T ss_dssp CCCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEE
T ss_pred CCCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEE
Confidence 4578999999985 899999999999999999998643 68999999999999999999999999999999999
Q ss_pred ecCC
Q 008851 83 AEND 86 (551)
Q Consensus 83 A~~~ 86 (551)
++++
T Consensus 74 a~~~ 77 (79)
T d2bz2a1 74 ARKQ 77 (79)
T ss_dssp CCSS
T ss_pred ecCC
Confidence 9754
No 69
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=2.9e-16 Score=132.41 Aligned_cols=78 Identities=22% Similarity=0.459 Sum_probs=71.4
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCC--EEEEEE
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEING--RQLRVD 81 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~G--R~LrV~ 81 (551)
.++++|||+|||++++|++|+++|++||.|..|++.++ ++||||+|.+.++|.+|++.||+..|+| ++|+|+
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~ 88 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVD 88 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEE
Confidence 46899999999999999999999999999999998754 6899999999999999999999999976 589999
Q ss_pred eecCCC
Q 008851 82 FAENDK 87 (551)
Q Consensus 82 ~A~~~~ 87 (551)
||+.++
T Consensus 89 ~ak~~~ 94 (97)
T d1whya_ 89 FAKSGP 94 (97)
T ss_dssp ECCCCC
T ss_pred eCCCCC
Confidence 998654
No 70
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=5.3e-16 Score=128.26 Aligned_cols=80 Identities=18% Similarity=0.343 Sum_probs=72.6
Q ss_pred CCCCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHh--CCceeCCEEE
Q 008851 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL--QGYEINGRQL 78 (551)
Q Consensus 1 ma~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~L--ng~~I~GR~L 78 (551)
++.+++++|||+|||+++++++|+++|+.||.|.++++..+ +|||||+|.+.++|.+|++.+ ++..++|+.|
T Consensus 3 ~~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l 76 (88)
T d2cq1a1 3 MDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPI 76 (88)
T ss_dssp CCSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEEC
T ss_pred CCCCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEE
Confidence 46779999999999999999999999999999999998754 589999999999999999865 6779999999
Q ss_pred EEEeecCC
Q 008851 79 RVDFAEND 86 (551)
Q Consensus 79 rV~~A~~~ 86 (551)
+|+|++.+
T Consensus 77 ~v~~sk~~ 84 (88)
T d2cq1a1 77 YIQYSNHK 84 (88)
T ss_dssp EEEECSCS
T ss_pred EEEECCCC
Confidence 99999754
No 71
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=3.3e-16 Score=132.80 Aligned_cols=76 Identities=21% Similarity=0.260 Sum_probs=70.5
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||+|||+++++++|+++|++||.|++|++.. +|||||+|.+.++|++|++.||+..|+|+.|+|.+++
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~ 86 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIR 86 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEe
Confidence 467899999999999999999999999999999863 5899999999999999999999999999999999997
Q ss_pred CCC
Q 008851 85 NDK 87 (551)
Q Consensus 85 ~~~ 87 (551)
.+.
T Consensus 87 ~~~ 89 (98)
T d1wg4a_ 87 VYP 89 (98)
T ss_dssp EEC
T ss_pred cCC
Confidence 643
No 72
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.1e-16 Score=133.75 Aligned_cols=81 Identities=25% Similarity=0.314 Sum_probs=72.9
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCcee--CCEEEEE
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEI--NGRQLRV 80 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I--~GR~LrV 80 (551)
..+..+|||+||++++||++|+++|++||.|++|.+..++ .+|||||+|.+.++|++|++.||+..| .|++|+|
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v 79 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRI 79 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEE
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEE
Confidence 3467789999999999999999999999999999998764 489999999999999999999999988 5788999
Q ss_pred EeecCCC
Q 008851 81 DFAENDK 87 (551)
Q Consensus 81 ~~A~~~~ 87 (551)
.|++...
T Consensus 80 ~~s~~~~ 86 (108)
T d2adba1 80 DFSKLTS 86 (108)
T ss_dssp EECSSCS
T ss_pred EecCCcc
Confidence 9987643
No 73
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=1.4e-15 Score=129.74 Aligned_cols=79 Identities=16% Similarity=0.201 Sum_probs=70.9
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHh--CCceeCCEEEEE
Q 008851 3 SSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL--QGYEINGRQLRV 80 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~L--ng~~I~GR~LrV 80 (551)
..++++|||+|||++++|++|+++|+.||.|+++++.++ ||||||+|.+.++|.+|++.| ++..++|++|+|
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 457899999999999999999999999999999998643 789999999999999999977 566789999999
Q ss_pred EeecCCC
Q 008851 81 DFAENDK 87 (551)
Q Consensus 81 ~~A~~~~ 87 (551)
.|++..+
T Consensus 86 ~~s~~~~ 92 (104)
T d1wexa_ 86 NYSTSKR 92 (104)
T ss_dssp EECSSSS
T ss_pred EEcCCCc
Confidence 9997543
No 74
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60 E-value=1.1e-15 Score=123.35 Aligned_cols=71 Identities=20% Similarity=0.329 Sum_probs=64.6
Q ss_pred EEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecCC
Q 008851 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEND 86 (551)
Q Consensus 9 VFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~~ 86 (551)
|||+|||+++++++|+++|++|| +..+++ ++.+|||||+|.+.++|.+|++.||+..++|++|+|+|+..+
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 555443 567899999999999999999999999999999999999754
No 75
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3e-15 Score=136.99 Aligned_cols=82 Identities=23% Similarity=0.398 Sum_probs=77.2
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 4 SQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 4 ~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
...++|||+|||+++|+++|+++|+.||.|..+.++.|+.+|+++|||||+|.+.++|.+|++ +++..|+|+.|+|++|
T Consensus 95 ~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A 173 (183)
T d1u1qa_ 95 LTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 173 (183)
T ss_dssp CCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEEC
T ss_pred cccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEec
Confidence 356899999999999999999999999999999999999999999999999999999999996 7889999999999998
Q ss_pred cCC
Q 008851 84 END 86 (551)
Q Consensus 84 ~~~ 86 (551)
.++
T Consensus 174 ~~k 176 (183)
T d1u1qa_ 174 LSK 176 (183)
T ss_dssp CCH
T ss_pred CCc
Confidence 753
No 76
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=4.5e-16 Score=134.65 Aligned_cols=80 Identities=20% Similarity=0.377 Sum_probs=73.8
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||+|||+++|+++|+++|+.||.+..+.++.+..+|+++|||||+|.+.++|.+|++ +|+..|+||.|+|..+.
T Consensus 17 ~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~ 95 (112)
T d1wela1 17 AGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPIT 95 (112)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEEC
T ss_pred CCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcC
Confidence 46799999999999999999999999999887777777899999999999999999999995 89999999999999986
Q ss_pred C
Q 008851 85 N 85 (551)
Q Consensus 85 ~ 85 (551)
.
T Consensus 96 ~ 96 (112)
T d1wela1 96 K 96 (112)
T ss_dssp H
T ss_pred h
Confidence 4
No 77
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=1.9e-15 Score=128.13 Aligned_cols=77 Identities=19% Similarity=0.354 Sum_probs=69.6
Q ss_pred CCCcEEEEecCCCC-CCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHH--HhCCceeCCEEEEE
Q 008851 4 SQHRCVFVGNIPYD-ATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR--NLQGYEINGRQLRV 80 (551)
Q Consensus 4 ~~srtVFVGNLP~d-~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~--~Lng~~I~GR~LrV 80 (551)
..+++|||+|||++ +||++|+++|+.||.|+++++..+ +|||||+|.+.++|.+|++ .+++..|+|+.|+|
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V 89 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKV 89 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEE
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEEE
Confidence 35789999999986 899999999999999999999754 6899999999999999998 57888999999999
Q ss_pred EeecCC
Q 008851 81 DFAEND 86 (551)
Q Consensus 81 ~~A~~~ 86 (551)
+||+..
T Consensus 90 ~~s~~~ 95 (99)
T d1x4fa1 90 DLSEKY 95 (99)
T ss_dssp EEECSC
T ss_pred EEcCCc
Confidence 999754
No 78
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=8.2e-15 Score=122.03 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=70.3
Q ss_pred CCCCcEEEEecCCCC-CCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHh--CCceeCCEEEE
Q 008851 3 SSQHRCVFVGNIPYD-ATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL--QGYEINGRQLR 79 (551)
Q Consensus 3 ~~~srtVFVGNLP~d-~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~L--ng~~I~GR~Lr 79 (551)
...+++|||+|||.. +|++||+++|+.||.|.+|++..+ ++||||+|++.++|.+|++.| ++..++|++|+
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~ 78 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVR 78 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEE
Confidence 457899999999986 889999999999999999999765 579999999999999999966 67889999999
Q ss_pred EEeecCC
Q 008851 80 VDFAEND 86 (551)
Q Consensus 80 V~~A~~~ 86 (551)
|+||+..
T Consensus 79 V~~s~~~ 85 (89)
T d1x4da1 79 VHLSQKY 85 (89)
T ss_dssp EEEECCC
T ss_pred EEECCCc
Confidence 9999754
No 79
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=6.7e-17 Score=134.14 Aligned_cols=76 Identities=22% Similarity=0.467 Sum_probs=68.4
Q ss_pred cEEEEecCCCCCCHHHHHHHHHcCCCeeEEEE-----eecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEE
Q 008851 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRL-----VIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVD 81 (551)
Q Consensus 7 rtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrL-----v~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~ 81 (551)
++|||||||+++||++|+++|+.||.|..+.+ +.+..+++++|||||+|.+.++|++|++ |||+.++|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 78999999999999999999999998876654 3466789999999999999999999984 99999999999996
Q ss_pred ee
Q 008851 82 FA 83 (551)
Q Consensus 82 ~A 83 (551)
++
T Consensus 81 r~ 82 (90)
T d1u2fa_ 81 RP 82 (90)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 80
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48 E-value=3.1e-14 Score=122.07 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=70.2
Q ss_pred CCCCcEEEEecCCCCC-CH----HHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEE
Q 008851 3 SSQHRCVFVGNIPYDA-TE----EQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQ 77 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~-TE----EeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~ 77 (551)
++..++|||+||+.++ ++ ++|+++|+.||.|++|++.+ .+|||||+|.+.++|.+|++.|||..|+|+.
T Consensus 2 ~~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~ 75 (104)
T d1weya_ 2 SSGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK------SFKRVRINFSNPLSAADARLRLHKTEFLGKE 75 (104)
T ss_dssp CSCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET------TTTEEEEECSSTTHHHHHHHTSTTSEETTEE
T ss_pred CCCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec------CCCEEEEEECCHHHHHHHHHHhcccccCCCE
Confidence 4568899999999886 33 57999999999999999874 4789999999999999999999999999999
Q ss_pred EEEEeecCCC
Q 008851 78 LRVDFAENDK 87 (551)
Q Consensus 78 LrV~~A~~~~ 87 (551)
|+|+||+...
T Consensus 76 l~v~~a~~~~ 85 (104)
T d1weya_ 76 MKLYFAQTLH 85 (104)
T ss_dssp CEEECCCCSS
T ss_pred eEEeecccCC
Confidence 9999997543
No 81
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=7e-15 Score=126.11 Aligned_cols=75 Identities=19% Similarity=0.202 Sum_probs=69.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEee
Q 008851 8 CVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFA 83 (551)
Q Consensus 8 tVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A 83 (551)
.++|+++..+++|++|+++|++||.|++|+|.++ .+|+++|||||+|.+.++|.+|++.|||..++||.|+|+|+
T Consensus 29 ~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 29 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred hHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 3667778888999999999999999999999877 58999999999999999999999999999999999999985
No 82
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=4.6e-13 Score=122.15 Aligned_cols=81 Identities=23% Similarity=0.431 Sum_probs=73.7
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
..++|||||||+++||++|+++|++||.|.++.+++|..+|+++|||||+|.+.++|.+|++. ++..++++.+.+.+..
T Consensus 5 ~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~~~~~~~~~~~ 83 (183)
T d1u1qa_ 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAV 83 (183)
T ss_dssp HHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCcccccchhhhhhh
Confidence 348999999999999999999999999999999999999999999999999999999999974 5568899988888765
Q ss_pred CC
Q 008851 85 ND 86 (551)
Q Consensus 85 ~~ 86 (551)
..
T Consensus 84 ~~ 85 (183)
T d1u1qa_ 84 SR 85 (183)
T ss_dssp CT
T ss_pred hc
Confidence 44
No 83
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=1.4e-12 Score=110.97 Aligned_cols=65 Identities=25% Similarity=0.400 Sum_probs=59.0
Q ss_pred CCCCcEEEEec--CCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCcee
Q 008851 3 SSQHRCVFVGN--IPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEI 73 (551)
Q Consensus 3 ~~~srtVFVGN--LP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I 73 (551)
+.+.+++||+| |++++||++|+++|++||.|++|++..+ +|||||+|.+.++|.+|++.|||..|
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 44678899955 9999999999999999999999988754 67999999999999999999999987
No 84
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=4.6e-12 Score=107.18 Aligned_cols=79 Identities=25% Similarity=0.407 Sum_probs=68.7
Q ss_pred CCCcEEEEecC--CCCCC---------HHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCce
Q 008851 4 SQHRCVFVGNI--PYDAT---------EEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYE 72 (551)
Q Consensus 4 ~~srtVFVGNL--P~d~T---------EEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~ 72 (551)
..+++|+|.|+ +.++. +++|++.|++||.|..|++..+ +.+|||||+|.+.++|.+|++.|||..
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng~~ 81 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDGRW 81 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTTCE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCCcE
Confidence 46899999999 65432 3679999999999999988643 568999999999999999999999999
Q ss_pred eCCEEEEEEeecCC
Q 008851 73 INGRQLRVDFAEND 86 (551)
Q Consensus 73 I~GR~LrV~~A~~~ 86 (551)
++||.|+|+++.+.
T Consensus 82 ~~gr~i~v~~~~g~ 95 (99)
T d2dita1 82 FGGRQITAQAWDGT 95 (99)
T ss_dssp ETTEECEEEECCSC
T ss_pred ECCEEEEEEEeCCc
Confidence 99999999998754
No 85
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.8e-12 Score=111.97 Aligned_cols=73 Identities=16% Similarity=0.227 Sum_probs=63.9
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCH-HHHHHHHHHhCCceeCCEEEEEEeec
Q 008851 6 HRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDE-ETALSARRNLQGYEINGRQLRVDFAE 84 (551)
Q Consensus 6 srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~-e~A~sAi~~Lng~~I~GR~LrV~~A~ 84 (551)
...+|||||++++||++|+++|+.||+|.+|+|+.+ +|||||+|.+. ++|..|+..+++..+.++.++|.++.
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 345699999999999999999999999999999854 79999999985 78999999999998887777776654
No 86
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.24 E-value=6.1e-12 Score=103.20 Aligned_cols=73 Identities=14% Similarity=0.105 Sum_probs=62.6
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEE-EEEEee
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQ-LRVDFA 83 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~-LrV~~A 83 (551)
+++.|||+++|++++++.| ++|++||.|+++++. +.+|||||+|.+.++|++|++ +||..|+|+. |.|..+
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~ 74 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS------NTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPC 74 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC------SSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEEC
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEec------CCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeC
Confidence 4678999999999987655 579999999999864 447999999999999999995 9999999974 678877
Q ss_pred cC
Q 008851 84 EN 85 (551)
Q Consensus 84 ~~ 85 (551)
..
T Consensus 75 ~~ 76 (81)
T d1wwha1 75 ID 76 (81)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 87
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=6.1e-12 Score=107.10 Aligned_cols=82 Identities=17% Similarity=0.232 Sum_probs=71.2
Q ss_pred CCCcEEEEecC--CCCCC--------HHHHHHHHHcCCCeeEEEEeecCCCC--CcceEEEEEeCCHHHHHHHHHHhCCc
Q 008851 4 SQHRCVFVGNI--PYDAT--------EEQLIEICREVGPVVSFRLVIDRETG--KPKGYGFCEYKDEETALSARRNLQGY 71 (551)
Q Consensus 4 ~~srtVFVGNL--P~d~T--------EEeLre~Fs~~G~V~~vrLv~Dr~TG--ksKGyAFVEF~d~e~A~sAi~~Lng~ 71 (551)
.++++|+|.|+ +.+.. .++|++.|++||.|++|.|.++.++. ..+|++||+|.+.++|.+|++.|||.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 47899999999 55443 35789999999999999998876554 34689999999999999999999999
Q ss_pred eeCCEEEEEEeecC
Q 008851 72 EINGRQLRVDFAEN 85 (551)
Q Consensus 72 ~I~GR~LrV~~A~~ 85 (551)
.++||.|+|.++..
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999999875
No 88
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.83 E-value=0.0014 Score=54.01 Aligned_cols=73 Identities=19% Similarity=0.320 Sum_probs=57.5
Q ss_pred CCCCcEEEEecCCCCCCH---------HHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCcee
Q 008851 3 SSQHRCVFVGNIPYDATE---------EQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEI 73 (551)
Q Consensus 3 ~~~srtVFVGNLP~d~TE---------EeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I 73 (551)
.+++-+|.|.=...+..| .+|.+.|..||+|.-+|++.|. -+|+|.|-+.|.+|+ .+++.++
T Consensus 12 GPpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~d~--------mwVTF~dG~SAL~al-~l~g~~v 82 (95)
T d1ufwa_ 12 GPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQGQ--------MLVTFADSHSALSVL-DVDGMKV 82 (95)
T ss_dssp CCTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEETTE--------EEEECSCSHHHHHHH-HGGGSEE
T ss_pred CCCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeCCe--------EEEEECCcHHHHHHh-ccCCeEE
Confidence 456677777544433322 3578889999999999999664 699999999999999 5899999
Q ss_pred CCEEEEEEeec
Q 008851 74 NGRQLRVDFAE 84 (551)
Q Consensus 74 ~GR~LrV~~A~ 84 (551)
.|+.|+|....
T Consensus 83 ~G~~l~It~~~ 93 (95)
T d1ufwa_ 83 KGRAVKISGPS 93 (95)
T ss_dssp TTEEEEEECCC
T ss_pred cceEEEEecCC
Confidence 99999997643
No 89
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.53 E-value=0.0074 Score=49.54 Aligned_cols=78 Identities=23% Similarity=0.339 Sum_probs=63.1
Q ss_pred cEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcc--eEEEEEeCCHHHHHHHHHHhCCceeC---C--EEEE
Q 008851 7 RCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPK--GYGFCEYKDEETALSARRNLQGYEIN---G--RQLR 79 (551)
Q Consensus 7 rtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksK--GyAFVEF~d~e~A~sAi~~Lng~~I~---G--R~Lr 79 (551)
++|.|++||...||+++.+.++..|.+..+..+..+.+-+.. .-|||.|.+.++.....+.++|+.+- | .+-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 578999999999999999999999999888777655444433 56899999999999999999998872 2 2346
Q ss_pred EEeec
Q 008851 80 VDFAE 84 (551)
Q Consensus 80 V~~A~ 84 (551)
|++|-
T Consensus 82 VE~AP 86 (91)
T d1uw4a_ 82 VEFAP 86 (91)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 77764
No 90
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.39 E-value=0.0088 Score=46.99 Aligned_cols=62 Identities=21% Similarity=0.269 Sum_probs=51.7
Q ss_pred HHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhCCceeCCEEEEEEeecC
Q 008851 21 EQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 85 (551)
Q Consensus 21 EeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Lng~~I~GR~LrV~~A~~ 85 (551)
+.|.+.|+++|.|.++.+....+ |. -.|-|...+.++|..|+..||.++|++++|.|.++..
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~d-g~--~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTD-YQ--LKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCS-TT--CCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHHHhheeEEEEEEEeccC-Cc--EEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 34667789999999998865432 33 3578999999999999999999999999999999864
No 91
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.81 E-value=1.1 Score=36.75 Aligned_cols=57 Identities=14% Similarity=0.195 Sum_probs=46.4
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhC
Q 008851 5 QHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69 (551)
Q Consensus 5 ~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Ln 69 (551)
....||.-.+|.+|...+|.++|+.||.|. |..+.|- -|||...+.++++.++..++
T Consensus 14 ~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~-VswIddT-------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 14 KRDHVLHVTFPKEWKTSDLYQLFSAFGNIQ-ISWIDDT-------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCSEEEEECCTTCCHHHHHHHHTTTCSCC-CEEEETT-------EEEEECSCHHHHHHHHHHHH
T ss_pred CcceeEEEeCCcccchhHHHHHhcCCCceE-EEEecCc-------eEEEEecCHHHHHHHHHHhc
Confidence 345688889999999999999999999764 3334332 68999999999999987655
No 92
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=32.77 E-value=53 Score=26.31 Aligned_cols=48 Identities=13% Similarity=-0.040 Sum_probs=33.1
Q ss_pred HHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeCCHHHHHHHHHHhC
Q 008851 22 QLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQ 69 (551)
Q Consensus 22 eLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~d~e~A~sAi~~Ln 69 (551)
++.+.|.+.|-+...........|+.+-....||+|.+..++|.+.+.
T Consensus 33 ~~~~~Lk~~Gl~r~~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~~ 80 (109)
T d2od6a1 33 VWVKEMKSRGLLKFSMNRVWNKGEVFRVVMTYEYKDRASFEANIAYLE 80 (109)
T ss_dssp HHHHHHHTTTEEEEEEEEECSSSSCEEEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCceEEEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHHH
Confidence 455666777877655433333357767666779999999999888763
No 93
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=31.82 E-value=65 Score=24.61 Aligned_cols=51 Identities=18% Similarity=0.339 Sum_probs=33.5
Q ss_pred cCCCCCCHHHHHHHHH-------cCCCeeEEEEeecCCC-CCcceE--EE-EEeCCHHHHHH
Q 008851 13 NIPYDATEEQLIEICR-------EVGPVVSFRLVIDRET-GKPKGY--GF-CEYKDEETALS 63 (551)
Q Consensus 13 NLP~d~TEEeLre~Fs-------~~G~V~~vrLv~Dr~T-GksKGy--AF-VEF~d~e~A~s 63 (551)
.+..+++++++.+++. .+..|..+.+-.+-.. ++.+|| || ++|.+.++.+.
T Consensus 9 k~k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~y~~~l~~~F~s~e~l~~ 70 (103)
T d1q4ra_ 9 SFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAE 70 (103)
T ss_dssp EECTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhhhhCceeEEEEeccccCCcccCCCccEEEEEEECCHHHHHH
Confidence 5677888887666654 3566888877665422 455666 65 58888877543
No 94
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=31.82 E-value=83 Score=22.45 Aligned_cols=65 Identities=11% Similarity=0.134 Sum_probs=48.6
Q ss_pred CCCCCCcEEEEecCCCCCCHHHHHHHHHcCCCeeEEEEeecCCCCCcceEEEEEeC----CHHHHHHHHHHhCCce
Q 008851 1 MASSQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYK----DEETALSARRNLQGYE 72 (551)
Q Consensus 1 ma~~~srtVFVGNLP~d~TEEeLre~Fs~~G~V~~vrLv~Dr~TGksKGyAFVEF~----d~e~A~sAi~~Lng~~ 72 (551)
|++...-++.|.|+.-..-...|++.|.+.-.|.++.+-+. .+-+.|.|. +.++..++++.+ |++
T Consensus 2 ~s~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~------~~~~~v~~d~~~~~~~~i~~~i~~~-Gy~ 70 (72)
T d1p6ta1 2 LSEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLA------TETVNVIYDPAETGTAAIQEKIEKL-GYH 70 (72)
T ss_dssp CCCCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGG------GTEEEEEECTTTSCHHHHHHHHHHH-TCE
T ss_pred CCCceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcC------CCEEEEEECCCCCCHHHHHHHHHHh-CCc
Confidence 34445566889999998889999999999988999988654 346788884 356677777665 443
No 95
>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.72 E-value=31 Score=23.61 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHhCC-ChHHHH
Q 008851 181 NEIMSEMKLMATQNKEQARQLLLAKP-PLLKAL 212 (551)
Q Consensus 181 ~eiLsqLK~l~~~~P~~Ar~LL~~NP-QLa~AL 212 (551)
-++|+++..+...++++||.+|..+- +|-.||
T Consensus 6 ~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai 38 (46)
T d1v92a_ 6 QDALREFVAVTGAEEDRARFFLESAGWDLQIAL 38 (46)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHH
Confidence 46888888888889999999999875 555554
No 96
>d1rjja_ d.58.4.4 (A:) Hypothetical protein AT5G22580 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.59 E-value=95 Score=24.17 Aligned_cols=84 Identities=17% Similarity=0.303 Sum_probs=48.1
Q ss_pred CCCCCCcEEEEecCCCCCCHHHHHHHHHc----CCCeeEEEEeecCC--CCCcceE--EE-EEeCCHHHHHH--------
Q 008851 1 MASSQHRCVFVGNIPYDATEEQLIEICRE----VGPVVSFRLVIDRE--TGKPKGY--GF-CEYKDEETALS-------- 63 (551)
Q Consensus 1 ma~~~srtVFVGNLP~d~TEEeLre~Fs~----~G~V~~vrLv~Dr~--TGksKGy--AF-VEF~d~e~A~s-------- 63 (551)
|++..=+-|..-.+-.+++.+++.+.|.. .-.|+++.+-.+-. .+..+|| || ++|+|.++...
T Consensus 1 ~~~~~~~HiVlfklk~~~~~e~i~~~l~~L~~~Ip~i~~~~~G~~~~~~~~~~~~~d~~l~~~F~~~e~l~~Y~~hP~H~ 80 (111)
T d1rjja_ 1 MATSGFKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHV 80 (111)
T ss_dssp CCSSEEEEEEEEECSSCCCHHHHHHHHHHHHGGGGGSCEEEEEEECCSCTTTSTTCCEEEEEEESSHHHHHHHHTSHHHH
T ss_pred CCCCceEEEEEEEECCCCCHHHHHHHHHHHHhcCccceEEEEeccCCCcccccCCccEEEEEEEcCHHHHHHHhCCHhHH
Confidence 45554444555577888998888777764 34467777765432 1333444 55 48888876432
Q ss_pred -HHHHhCCceeCCEEEEEEeecCC
Q 008851 64 -ARRNLQGYEINGRQLRVDFAEND 86 (551)
Q Consensus 64 -Ai~~Lng~~I~GR~LrV~~A~~~ 86 (551)
.++.+. .+-.+.+.++|-...
T Consensus 81 ~~~~~~~--p~~~~~~v~Df~~~~ 102 (111)
T d1rjja_ 81 EFSAAFT--AVIDKIVLLDFPVAA 102 (111)
T ss_dssp HHHHHHH--HTCSEEEEEEEEECT
T ss_pred HHHHHHH--HHhcceEEEeEEccc
Confidence 111111 234456777776543
Done!