Your job contains 1 sequence.
>008852
MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA
TCLLESKPSKDLRKFLRTHCDGETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVRSQ
LTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMR
VREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMISM
GTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHG
GSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSL
ASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYDKD
RKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEEVAAGQEKKEKKKKKSKKAD
DERTNGSVEAENEESVKKEKKKRKKQVAEAGGENVEAGEKKKKKRKHSEVNEEESEVPSK
KEKKKKKKNDD
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008852
(551 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2096214 - symbol:AT3G05060 "AT3G05060" species... 1894 1.5e-195 1
TAIR|locus:2181211 - symbol:AT5G27120 "AT5G27120" species... 1875 1.5e-193 1
UNIPROTKB|E1BUS2 - symbol:NOP58 "Uncharacterized protein"... 1380 4.3e-141 1
UNIPROTKB|F1N218 - symbol:NOP58 "Uncharacterized protein"... 1368 8.0e-140 1
UNIPROTKB|Q9Y2X3 - symbol:NOP58 "Nucleolar protein 58" sp... 1367 1.0e-139 1
MGI|MGI:1933184 - symbol:Nop58 "NOP58 ribonucleoprotein" ... 1358 9.2e-139 1
RGD|620484 - symbol:Nop58 "NOP58 ribonucleoprotein" speci... 1353 3.1e-138 1
UNIPROTKB|I3LDD2 - symbol:NOP58 "Uncharacterized protein"... 1334 3.2e-136 1
FB|FBgn0026196 - symbol:nop5 "nop5" species:7227 "Drosoph... 1295 4.4e-132 1
POMBASE|SPAC23G3.06 - symbol:SPAC23G3.06 "U3 snoRNP prote... 1238 4.8e-126 1
WB|WBGene00020915 - symbol:nol-5 species:6239 "Caenorhabd... 1191 4.6e-121 1
SGD|S000005837 - symbol:NOP58 "Protein involved in pre-rR... 1157 1.8e-117 1
DICTYBASE|DDB_G0268098 - symbol:nop58 "nucleolar protein ... 1149 1.3e-116 1
ASPGD|ASPL0000037939 - symbol:nop58 species:162425 "Emeri... 1114 6.6e-113 1
UNIPROTKB|G4MPA1 - symbol:MGG_07008 "Nucleolar protein no... 1107 3.6e-112 1
GENEDB_PFALCIPARUM|PF10_0085 - symbol:PF10_0085 "nucleola... 1047 8.3e-106 1
UNIPROTKB|Q8IJV7 - symbol:PF10_0085 "Nucleolar protein NO... 1047 8.3e-106 1
TAIR|locus:2205270 - symbol:NOP56 "homolog of nucleolar p... 892 2.2e-89 1
TAIR|locus:2087755 - symbol:AT3G12860 species:3702 "Arabi... 867 6.3e-89 2
MGI|MGI:1914384 - symbol:Nop56 "NOP56 ribonucleoprotein" ... 847 2.4e-87 2
SGD|S000004187 - symbol:NOP56 "Nucleolar protein componen... 867 9.9e-87 1
UNIPROTKB|O00567 - symbol:NOP56 "Nucleolar protein 56" sp... 856 1.4e-85 1
UNIPROTKB|F1MW06 - symbol:NOP56 "Nucleolar protein 56" sp... 853 3.0e-85 1
UNIPROTKB|E2QU53 - symbol:NOP56 "Uncharacterized protein"... 852 3.8e-85 1
ZFIN|ZDB-GENE-040109-1 - symbol:nop56 "NOP56 ribonucleopr... 851 4.9e-85 1
UNIPROTKB|Q4KLK7 - symbol:Nol5a "RCG26515, isoform CRA_c"... 850 6.2e-85 1
UNIPROTKB|Q3SZ63 - symbol:NOP56 "Nucleolar protein 56" sp... 847 1.3e-84 1
FB|FBgn0038964 - symbol:Nop56 "Nop56" species:7227 "Droso... 839 9.1e-84 1
POMBASE|SPBC646.10c - symbol:SPBC646.10c "U3 snoRNP prote... 817 2.0e-81 1
CGD|CAL0000142 - symbol:SIK1 species:5476 "Candida albica... 802 7.6e-80 1
UNIPROTKB|Q5ACS3 - symbol:SIK1 "Putative uncharacterized ... 802 7.6e-80 1
RGD|1308892 - symbol:Nop56 "NOP56 ribonucleoprotein" spec... 792 8.7e-79 1
WB|WBGene00010627 - symbol:K07C5.4 species:6239 "Caenorha... 783 7.9e-78 1
ASPGD|ASPL0000040023 - symbol:AN10352 species:162425 "Eme... 755 7.3e-75 1
DICTYBASE|DDB_G0285679 - symbol:nol5a "NOP5 family protei... 754 9.3e-75 1
UNIPROTKB|G4N2E5 - symbol:MGG_07915 "Uncharacterized prot... 662 5.2e-65 1
UNIPROTKB|H9L0K4 - symbol:H9L0K4 "Uncharacterized protein... 654 3.7e-64 1
UNIPROTKB|Q58105 - symbol:MJ0694 "Uncharacterized NOP5 fa... 485 3.0e-46 1
UNIPROTKB|Q97ZH3 - symbol:SSO0939 "Pre mRNA splicing prot... 468 1.9e-44 1
UNIPROTKB|Q6NVP6 - symbol:prpf31 "U4/U6 small nuclear rib... 321 2.9e-28 2
ZFIN|ZDB-GENE-040426-1561 - symbol:prpf31 "PRP31 pre-mRNA... 325 6.8e-28 2
UNIPROTKB|E7ESA8 - symbol:PRPF31 "U4/U6 small nuclear rib... 319 2.6e-27 1
UNIPROTKB|Q5U5C5 - symbol:prpf31 "U4/U6 small nuclear rib... 316 2.6e-27 2
UNIPROTKB|F1RNI3 - symbol:PRPF31 "Uncharacterized protein... 323 3.1e-27 1
MGI|MGI:1916238 - symbol:Prpf31 "PRP31 pre-mRNA processin... 323 3.1e-27 1
FB|FBgn0036487 - symbol:Prp31 species:7227 "Drosophila me... 323 3.2e-27 1
UNIPROTKB|E1BM48 - symbol:PRPF31 "Uncharacterized protein... 319 1.0e-26 1
UNIPROTKB|F1PKI0 - symbol:PRPF31 "Uncharacterized protein... 319 1.0e-26 1
UNIPROTKB|Q8WWY3 - symbol:PRPF31 "U4/U6 small nuclear rib... 319 1.0e-26 1
UNIPROTKB|E7EVX8 - symbol:PRPF31 "U4/U6 small nuclear rib... 306 4.0e-25 1
POMBASE|SPBC119.13c - symbol:prp31 "U4/U6 x U5 tri-snRNP ... 304 8.0e-25 2
UNIPROTKB|E7EN72 - symbol:PRPF31 "U4/U6 small nuclear rib... 269 7.7e-23 1
WB|WBGene00022458 - symbol:prp-31 species:6239 "Caenorhab... 281 4.4e-22 1
UNIPROTKB|E7ESX0 - symbol:PRPF31 "U4/U6 small nuclear rib... 259 9.9e-22 1
TAIR|locus:2195698 - symbol:emb1220 "AT1G60170" species:3... 277 1.1e-21 1
DICTYBASE|DDB_G0289595 - symbol:prpf31 "pre-mRNA processi... 267 1.3e-20 1
UNIPROTKB|E7EU94 - symbol:PRPF31 "U4/U6 small nuclear rib... 236 3.4e-19 1
GENEDB_PFALCIPARUM|PFD0450c - symbol:PFD0450c "pre-mrna s... 253 8.8e-19 1
UNIPROTKB|C0H4A0 - symbol:PFD0450c "Pre-mRNA splicing fac... 253 8.8e-19 1
RGD|1305832 - symbol:Prpf31 "PRP31 pre-mRNA processing fa... 189 4.6e-14 1
ASPGD|ASPL0000059636 - symbol:AN1260 species:162425 "Emer... 202 4.4e-13 1
SGD|S000003323 - symbol:PRP31 "Splicing factor" species:4... 198 1.1e-12 1
>TAIR|locus:2096214 [details] [associations]
symbol:AT3G05060 "AT3G05060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] Pfam:PF01798 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0042254
EMBL:AC009177 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310 OMA:DAHEQLA
ProtClustDB:CLSN2684456 EMBL:AF302491 EMBL:AF412080 IPI:IPI00543036
RefSeq:NP_187157.1 UniGene:At.16937 ProteinModelPortal:Q9MAB3
SMR:Q9MAB3 STRING:Q9MAB3 PaxDb:Q9MAB3 PRIDE:Q9MAB3
EnsemblPlants:AT3G05060.1 GeneID:819668 KEGG:ath:AT3G05060
TAIR:At3g05060 InParanoid:Q9MAB3 PhylomeDB:Q9MAB3
Genevestigator:Q9MAB3 Uniprot:Q9MAB3
Length = 533
Score = 1894 (671.8 bits), Expect = 1.5e-195, P = 1.5e-195
Identities = 372/461 (80%), Positives = 419/461 (90%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
+LVL+ET AGFALFKV DEGK++ VE L +EF++ +SAR++VKLKAF KF+NTSEAL+A
Sbjct: 2 VLVLYETAAGFALFKVKDEGKMANVEDLCKEFDTPDSARKMVKLKAFEKFDNTSEALEAV 61
Query: 61 TCLLESKPSKDLRKFLRTHCDGETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVRSQ 120
LLE PSK LRKFL+ +C GETLAVADSKLGN IK+KLKI+C+HNNAVMEL+RGVRSQ
Sbjct: 62 AKLLEGAPSKGLRKFLKANCQGETLAVADSKLGNVIKEKLKIDCIHNNAVMELLRGVRSQ 121
Query: 121 LTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMR 180
TELISGL QDL PMSLGLSHSL+RYKLKFS+DKVDTMIIQAIGLLDDLDKELNTYAMR
Sbjct: 122 FTELISGLGDQDLAPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMR 181
Query: 181 VREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMISM 240
VREWYGWHFPELAKII DNILYAK+VKLMG+R NAAKLDFSEIL +E+EA LK+AA+ISM
Sbjct: 182 VREWYGWHFPELAKIISDNILYAKSVKLMGNRVNAAKLDFSEILADEIEADLKDAAVISM 241
Query: 241 GTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHG 300
GTEVSDLDLL+I+ELCDQVLSL+EYRAQLYDYLKSRMNT+APNLTALVGELVGARLI+HG
Sbjct: 242 GTEVSDLDLLHIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHG 301
Query: 301 GSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSL 360
GSLLNL+KQPGSTVQILGAEKALFRALKTKHATPKYGLI+HASLVGQAAPKHKGKISRSL
Sbjct: 302 GSLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASLVGQAAPKHKGKISRSL 361
Query: 361 ASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYDKD 420
A+KT LAIR DALGD QDN+MGLENRAKLEARLRNLEGK+LGR +GS+KGKPKIEVY+KD
Sbjct: 362 AAKTVLAIRVDALGDSQDNTMGLENRAKLEARLRNLEGKDLGRLSGSSKGKPKIEVYNKD 421
Query: 421 RKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEE 461
+K G G +IT AKTYN AADS+LG E +A ++ K ++
Sbjct: 422 KKMGSGGLITPAKTYNTAADSLLG--ETSAKSEEPSKKKDK 460
>TAIR|locus:2181211 [details] [associations]
symbol:AT5G27120 "AT5G27120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
Pfam:PF01798 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005730 GO:GO:0042254 EMBL:AF007271 eggNOG:COG1498
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K14565
HOGENOM:HOG000196310 OMA:DLRTTPK EMBL:AF302490 EMBL:AY074281
EMBL:AY096684 EMBL:BT002060 IPI:IPI00520435 PIR:T01807
RefSeq:NP_198064.1 UniGene:At.10285 UniGene:At.55031
ProteinModelPortal:O04658 SMR:O04658 STRING:O04658 PaxDb:O04658
PRIDE:O04658 EnsemblPlants:AT5G27120.1 GeneID:832770
KEGG:ath:AT5G27120 TAIR:At5g27120 InParanoid:O04658
PhylomeDB:O04658 ProtClustDB:CLSN2684456 Genevestigator:O04658
Uniprot:O04658
Length = 533
Score = 1875 (665.1 bits), Expect = 1.5e-193, P = 1.5e-193
Identities = 369/443 (83%), Positives = 410/443 (92%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
ML+LFETP GFA+FKVL+EGKLS VE L EF++A+ AR++VKL AF KF+NT+EAL+A
Sbjct: 1 MLILFETPGGFAIFKVLNEGKLSNVEDLGNEFSTAKLARKMVKLVAFDKFDNTAEALEAV 60
Query: 61 TCLLESKPSKDLRKFLRTHCDGETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVRSQ 120
LLE PSK LRKFL+ +C GETLAVADSKLGN IK+KLKI CVHNNAVMEL+RG+RSQ
Sbjct: 61 AKLLEGTPSKGLRKFLKANCVGETLAVADSKLGNIIKEKLKIVCVHNNAVMELLRGIRSQ 120
Query: 121 LTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMR 180
LTELISGL QDL PMSLGLSHSL+RYKLKFS+DKVDTMIIQAIGLLDDLDKELNTYAMR
Sbjct: 121 LTELISGLGDQDLGPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMR 180
Query: 181 VREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMISM 240
VREW+GWHFPELAKI+QDNILYAKAVKLMG+R NAAKLDFSEIL +E+EA+LKEAA+ISM
Sbjct: 181 VREWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAKLDFSEILADEIEAELKEAAVISM 240
Query: 241 GTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHG 300
GTEVSDLDLL+I+ELCDQVLSLAEYRAQLYDYLKSRMNT+APNLTALVGELVGARLI+HG
Sbjct: 241 GTEVSDLDLLHIRELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHG 300
Query: 301 GSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSL 360
GSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLI+HAS+VGQAAPK+KGKISRSL
Sbjct: 301 GSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSL 360
Query: 361 ASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYDKD 420
A+K+ LAIR DALGD QDN+MG+ENR KLEARLR LEGK+LGR +GSAKGKPKIEVYDKD
Sbjct: 361 AAKSVLAIRCDALGDSQDNTMGVENRLKLEARLRTLEGKDLGRLSGSAKGKPKIEVYDKD 420
Query: 421 RKKGPGAMITAAKTYNPAADSIL 443
+KKG G +IT AKTYN AADS+L
Sbjct: 421 KKKGSGGLITPAKTYNTAADSLL 443
>UNIPROTKB|E1BUS2 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0070761 "pre-snoRNP complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 CTD:51602 OMA:DAHEQLA GeneTree:ENSGT00550000074998
EMBL:AADN02019867 EMBL:AADN02019868 IPI:IPI00582637
RefSeq:XP_421942.1 UniGene:Gga.12235 PRIDE:E1BUS2
Ensembl:ENSGALT00000013776 GeneID:424087 KEGG:gga:424087
NextBio:20826466 Uniprot:E1BUS2
Length = 527
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 287/468 (61%), Positives = 347/468 (74%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
MLVLFET AG+A+FKVL+E KL +V+ LW+EF + E A +IVKLK F KF++T+EAL A+
Sbjct: 1 MLVLFETAAGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTTEALAAS 60
Query: 61 TCLLESKPSKDLRKFLRTHC--DG-ETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
T L+E K SK+L+K L+ D E LAVAD+KLG IKDKL + C+H+ V ELMRG+
Sbjct: 61 TALVEGKLSKNLKKILKKIVAKDAHEQLAVADAKLGGVIKDKLNLSCIHSPMVTELMRGI 120
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
RSQ+ LI+GL +++ M LGL+HSLSRYKLKFS DKVDTMI+QAI LLDDLDKELN Y
Sbjct: 121 RSQIEGLITGLPSREMAAMCLGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNY 180
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAM 237
MR REWYGWHFPEL KII DN+ Y K V+ +GDR N A D S+ILPEE+E +K AA
Sbjct: 181 IMRCREWYGWHFPELGKIITDNLTYCKCVRKVGDRRNFASSDVSDILPEEIEEDVKAAAE 240
Query: 238 ISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLI 297
ISMGTEVS+ D+ NI LCDQV+ ++EYR QLYDYLK+RM +APNLT +VGELVGARLI
Sbjct: 241 ISMGTEVSEEDINNIIHLCDQVIEISEYRTQLYDYLKNRMMAIAPNLTVMVGELVGARLI 300
Query: 298 AHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKIS 357
AH GSLLNLAK P STVQILGAEKALFRALKTK TPK+GLIYHASLVGQ K+KGKIS
Sbjct: 301 AHAGSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKFGLIYHASLVGQTTAKNKGKIS 360
Query: 358 RSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVY 417
R LA+KTAL IRYDALG+ MG ENR K+E RLR+LE + + R +G+ K +
Sbjct: 361 RMLAAKTALTIRYDALGEDTSAEMGAENRLKVETRLRHLEERGIRRISGTGKALARA--- 417
Query: 418 DKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEEVAAG 465
DK + K + K Y+P+ DS L A SK + + +EE AG
Sbjct: 418 DKYQNK------SEIKVYDPSGDSTLP----AVSKKRKIQEVEEQEAG 455
>UNIPROTKB|F1N218 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 CTD:51602 OMA:DAHEQLA GeneTree:ENSGT00550000074998
EMBL:DAAA02005606 EMBL:DAAA02005607 IPI:IPI00711083
RefSeq:NP_001179886.1 UniGene:Bt.45900 PRIDE:F1N218
Ensembl:ENSBTAT00000007254 GeneID:507155 KEGG:bta:507155
NextBio:20867927 Uniprot:F1N218
Length = 529
Score = 1368 (486.6 bits), Expect = 8.0e-140, P = 8.0e-140
Identities = 273/445 (61%), Positives = 337/445 (75%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
MLVLFET G+A+FKVL+E KL +V+ LW+EF + E A +IVKLK F KF++T+EAL A
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
Query: 61 TCLLESKPSKDLRKFLRTHCDG--ETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVR 118
T L+E K +K L+K L+ E LAVAD+KLG IK+KL + C+H+ V ELMRG+R
Sbjct: 61 TALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIR 120
Query: 119 SQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYA 178
SQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLDKELN Y
Sbjct: 121 SQMDGLIPGVEPREMTAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYI 180
Query: 179 MRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMI 238
MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE+LPEEVEA++K AA I
Sbjct: 181 MRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAQLSELLPEEVEAEVKAAAEI 240
Query: 239 SMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIA 298
SMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGELVGARLIA
Sbjct: 241 SMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIA 300
Query: 299 HGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISR 358
H GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ +PKHKGKISR
Sbjct: 301 HAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISR 360
Query: 359 SLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYD 418
LA+KT LAIRYDA G+ ++MG+ENRAKLEARLR LE + + + +G+ K K E Y+
Sbjct: 361 MLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKAEKYE 420
Query: 419 KDRKKGPGAMITAAKTYNPAADSIL 443
+ KTY+P+ DS L
Sbjct: 421 HKSE---------VKTYDPSGDSTL 436
>UNIPROTKB|Q9Y2X3 [details] [associations]
symbol:NOP58 "Nucleolar protein 58" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IDA;TAS] [GO:0016049
"cell growth" evidence=TAS] [GO:0006364 "rRNA processing"
evidence=TAS] [GO:0006608 "snRNP protein import into nucleus"
evidence=ISS] [GO:0030515 "snoRNA binding" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IDA] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] [GO:0015030 "Cajal body" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Pfam:PF01798 GO:GO:0005737 GO:GO:0016049
GO:GO:0030515 GO:GO:0015030 GO:GO:0070761 GO:GO:0006364
EMBL:AC064836 GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310
EMBL:AF123534 EMBL:AF263608 EMBL:BC032592 EMBL:BC009306
EMBL:AL117554 EMBL:AF161469 IPI:IPI00006379 PIR:T17299
RefSeq:NP_057018.1 UniGene:Hs.471104 ProteinModelPortal:Q9Y2X3
SMR:Q9Y2X3 IntAct:Q9Y2X3 STRING:Q9Y2X3 PhosphoSite:Q9Y2X3
DMDM:17380155 SWISS-2DPAGE:Q9Y2X3 PaxDb:Q9Y2X3 PeptideAtlas:Q9Y2X3
PRIDE:Q9Y2X3 DNASU:51602 Ensembl:ENST00000264279 GeneID:51602
KEGG:hsa:51602 UCSC:uc002uzb.3 CTD:51602 GeneCards:GC02P203130
HGNC:HGNC:29926 HPA:HPA018472 HPA:HPA021062 neXtProt:NX_Q9Y2X3
PharmGKB:PA164724092 InParanoid:Q9Y2X3 OMA:DAHEQLA
OrthoDB:EOG451DQQ PhylomeDB:Q9Y2X3 ChiTaRS:NOP58 GenomeRNAi:51602
NextBio:55479 ArrayExpress:Q9Y2X3 Bgee:Q9Y2X3 Genevestigator:Q9Y2X3
GermOnline:ENSG00000055044 GO:GO:0006608 Uniprot:Q9Y2X3
Length = 529
Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
Identities = 273/445 (61%), Positives = 337/445 (75%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
MLVLFET G+A+FKVL+E KL +V+ LW+EF + E A +IVKLK F KF++T+EAL A
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
Query: 61 TCLLESKPSKDLRKFLRTHCDG--ETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVR 118
T L+E K +K L+K L+ E LAVAD+KLG IK+KL + C+H+ V ELMRG+R
Sbjct: 61 TALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIR 120
Query: 119 SQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYA 178
SQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLDKELN Y
Sbjct: 121 SQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYI 180
Query: 179 MRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMI 238
MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE+LPEEVEA++K AA I
Sbjct: 181 MRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEI 240
Query: 239 SMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIA 298
SMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGELVGARLIA
Sbjct: 241 SMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIA 300
Query: 299 HGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISR 358
H GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ +PKHKGKISR
Sbjct: 301 HAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISR 360
Query: 359 SLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYD 418
LA+KT LAIRYDA G+ ++MG+ENRAKLEARLR LE + + + +G+ K K E Y+
Sbjct: 361 MLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYE 420
Query: 419 KDRKKGPGAMITAAKTYNPAADSIL 443
+ KTY+P+ DS L
Sbjct: 421 HKSE---------VKTYDPSGDSTL 436
>MGI|MGI:1933184 [details] [associations]
symbol:Nop58 "NOP58 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO;IC] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0006608 "snRNP protein
import into nucleus" evidence=ISO] [GO:0015030 "Cajal body"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0030519 "snoRNP binding" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0070761 "pre-snoRNP complex"
evidence=ISO] MGI:MGI:1933184 Pfam:PF01798 GO:GO:0005737
GO:GO:0005730 GO:GO:0030515 GO:GO:0042254 GO:GO:0015030
GO:GO:0030519 GO:GO:0070761 GO:GO:0005732 eggNOG:COG1498
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K14565
HOGENOM:HOG000196310 CTD:51602 OMA:DAHEQLA OrthoDB:EOG451DQQ
ChiTaRS:NOP58 GO:GO:0006608 EMBL:AF053232 EMBL:AK044216
EMBL:AK133959 EMBL:AK134286 EMBL:BC076604 EMBL:BC085135
IPI:IPI00463468 RefSeq:NP_061356.2 UniGene:Mm.220367
ProteinModelPortal:Q6DFW4 SMR:Q6DFW4 IntAct:Q6DFW4 STRING:Q6DFW4
PhosphoSite:Q6DFW4 PaxDb:Q6DFW4 PRIDE:Q6DFW4
Ensembl:ENSMUST00000027174 GeneID:55989 KEGG:mmu:55989
UCSC:uc007bdy.1 GeneTree:ENSGT00550000074998 InParanoid:Q6DFW4
NextBio:311710 Bgee:Q6DFW4 CleanEx:MM_NOL5 Genevestigator:Q6DFW4
Uniprot:Q6DFW4
Length = 536
Score = 1358 (483.1 bits), Expect = 9.2e-139, P = 9.2e-139
Identities = 274/462 (59%), Positives = 341/462 (73%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
MLVLFET G+A+FKVL+E KL +V+ LW+EF + E A +IVKLK F KF++T+EAL A
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
Query: 61 TCLLESKPSKDLRKFLRTHCDG--ETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVR 118
T L+E K +K L+K L+ E LAVAD+KLG IK+KL + C+H+ V ELMRG+R
Sbjct: 61 TALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIR 120
Query: 119 SQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYA 178
SQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLDKELN Y
Sbjct: 121 SQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYI 180
Query: 179 MRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMI 238
MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE L EEVEA++K AA I
Sbjct: 181 MRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASASLSEFLSEEVEAEVKAAAEI 240
Query: 239 SMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIA 298
SMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGELVGARLIA
Sbjct: 241 SMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIA 300
Query: 299 HGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISR 358
H GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ++PKHKGKISR
Sbjct: 301 HAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQSSPKHKGKISR 360
Query: 359 SLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYD 418
LA+KT LAIRYDA G+ ++MG+ENRAKLEARLR LE + + + +G+ K K E Y+
Sbjct: 361 MLAAKTVLAIRYDAFGEDSSSAMGIENRAKLEARLRILEDRGIRKISGTGKALAKAEKYE 420
Query: 419 KDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPME 460
+ KTY+P+ DS L ++ +K E
Sbjct: 421 HKSE---------VKTYDPSGDSTLPTCSKKRKIEEVDKEDE 453
>RGD|620484 [details] [associations]
symbol:Nop58 "NOP58 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0000154 "rRNA modification" evidence=NAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006608 "snRNP protein import into nucleus"
evidence=IDA] [GO:0008649 "rRNA methyltransferase activity"
evidence=NAS] [GO:0015030 "Cajal body" evidence=IEA;ISO]
[GO:0030515 "snoRNA binding" evidence=IEA;ISO] [GO:0030519 "snoRNP
binding" evidence=TAS] [GO:0031167 "rRNA methylation" evidence=NAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0070761
"pre-snoRNP complex" evidence=IEA;ISO] EMBL:AF194371 Pfam:PF01798
RGD:620484 GO:GO:0005737 GO:GO:0005730 GO:GO:0051082 GO:GO:0030515
GO:GO:0015030 GO:GO:0030519 GO:GO:0070761 GO:GO:0005732
GO:GO:0008649 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310 CTD:51602
GO:GO:0006608 GeneTree:ENSGT00550000074998 EMBL:AF069782
IPI:IPI00214536 RefSeq:NP_068522.1 UniGene:Rn.43930
ProteinModelPortal:Q9QZ86 STRING:Q9QZ86 PhosphoSite:Q9QZ86
PRIDE:Q9QZ86 Ensembl:ENSRNOT00000022676 GeneID:60373 KEGG:rno:60373
UCSC:RGD:620484 InParanoid:Q9QZ86 NextBio:612047
ArrayExpress:Q9QZ86 Genevestigator:Q9QZ86
GermOnline:ENSRNOG00000016486 Uniprot:Q9QZ86
Length = 534
Score = 1353 (481.3 bits), Expect = 3.1e-138, P = 3.1e-138
Identities = 274/462 (59%), Positives = 339/462 (73%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
MLVLFET G+A+FKVL+E KL +V+ LW+EF + E A +IVKLK F KF++T+EAL A
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
Query: 61 TCLLESKPSKDLRKFLRTHCDG--ETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVR 118
T L+E K +K L+K L+ E LAVAD+KLG IK+KL + C+H+ V ELMRG+R
Sbjct: 61 TALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIR 120
Query: 119 SQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYA 178
SQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLDKELN Y
Sbjct: 121 SQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYI 180
Query: 179 MRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMI 238
MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE L EEVEA++K AA I
Sbjct: 181 MRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASATLSEFLSEEVEAEVKAAAEI 240
Query: 239 SMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIA 298
SMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGELVGARLIA
Sbjct: 241 SMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIA 300
Query: 299 HGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISR 358
H GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ +PKHKGKISR
Sbjct: 301 HAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISR 360
Query: 359 SLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYD 418
LA+KT LAIRYDA G+ ++MG ENRAKLEARLR LE + + + +G+ K K E Y+
Sbjct: 361 MLAAKTVLAIRYDAFGEDSSSAMGAENRAKLEARLRILEDRGIRKISGTGKALAKAEKYE 420
Query: 419 KDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPME 460
+ KTY+P+ DS L ++ +K E
Sbjct: 421 HKSE---------VKTYDPSGDSTLPTCSKKRKIEEVDKEDE 453
>UNIPROTKB|I3LDD2 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
OMA:DAHEQLA GeneTree:ENSGT00550000074998 EMBL:CU466450
Ensembl:ENSSSCT00000029321 Uniprot:I3LDD2
Length = 416
Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
Identities = 263/415 (63%), Positives = 322/415 (77%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
MLVLFET G+A+FKVL+E KL +V+ LW+EF + E A ++VKLK F KF++T+EAL A
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKVVKLKHFEKFQDTAEALAAF 60
Query: 61 TCLLESKPSKDLRKFLRTHCDG--ETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVR 118
T L+E K +K L+K L+ E LAVAD+KLG IK+KL + C+H+ V ELMRG+R
Sbjct: 61 TALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIR 120
Query: 119 SQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYA 178
SQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLDKELN Y
Sbjct: 121 SQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYI 180
Query: 179 MRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMI 238
MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE+LPEEVEA++K AA I
Sbjct: 181 MRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEI 240
Query: 239 SMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIA 298
SMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGELVGARLIA
Sbjct: 241 SMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIA 300
Query: 299 HGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISR 358
H GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ +PKHKGKISR
Sbjct: 301 HAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISR 360
Query: 359 SLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPK 413
LA+KT LAIRYDA G+ ++MG+ENRAKLEARLR LE + + + KG K
Sbjct: 361 MLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIKENKWNRKGISK 415
>FB|FBgn0026196 [details] [associations]
symbol:nop5 "nop5" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01798 GO:GO:0005730 EMBL:AE014134 GO:GO:0006364
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 KO:K14565 OMA:DAHEQLA
GeneTree:ENSGT00550000074998 FlyBase:FBgn0026196 EMBL:AY061401
EMBL:FM245448 EMBL:FM245453 RefSeq:NP_477412.1 UniGene:Dm.3320
SMR:Q9VM69 IntAct:Q9VM69 MINT:MINT-335173 STRING:Q9VM69
EnsemblMetazoa:FBtr0079369 GeneID:33966 KEGG:dme:Dmel_CG10206
UCSC:CG10206-RA CTD:33966 InParanoid:Q9VM69 GenomeRNAi:33966
NextBio:786179 Uniprot:Q9VM69
Length = 511
Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
Identities = 263/465 (56%), Positives = 338/465 (72%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
M VL+ETPAG+A+FK+LDE KL +V+ L+QEF + E A +++KLK F KF +T+EAL AA
Sbjct: 1 MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFETPEKANKLLKLKHFEKFNDTTEALAAA 60
Query: 61 TCLLESKPSKDLRKFLRTHCDGE---TLAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
T +E K +K L+K L+ + +L VAD+KLG AIKDKL ++CV N V ELMR +
Sbjct: 61 TAAVEGKVAKPLKKTLKKLLVDDVQSSLLVADAKLGTAIKDKLSVQCVCNTGVQELMRCI 120
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
R Q L+ GL +++ M+LGL+HSLSRYKLKFS DK+DTMI+QA LLDDLDKELN Y
Sbjct: 121 RQQADSLLGGLPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNY 180
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAM 237
MR REWYGWHFPEL KII DNI + K +KL+G R N A D S+ILPE+VE ++KEAA
Sbjct: 181 MMRAREWYGWHFPELGKIITDNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEKVKEAAE 240
Query: 238 ISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLI 297
ISMGTE+S+ D+LNI+ LCD+++S+ +YR LYDYLK+RM +APNLT LVG+ VGARLI
Sbjct: 241 ISMGTEISEEDVLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLI 300
Query: 298 AHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKIS 357
AH GSL+NLAK P STVQILGAEKALFRALKTK TPKYGLIYHA LVGQA+ K+KGK+S
Sbjct: 301 AHAGSLINLAKHPSSTVQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMS 360
Query: 358 RSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVY 417
RSLA+K +LA R DA G+ +G ++ KLE+RLR LE L + +G+ K K K E Y
Sbjct: 361 RSLAAKASLATRVDAFGEEATFELGAAHKVKLESRLRLLEEGNLRKLSGTGKAKAKFEKY 420
Query: 418 DKDRKKGPGAMITAAKTYNPAADSILGLMENAA-SKDDEEKPMEE 461
+ TY P AD+ L + + S+ +++ P+++
Sbjct: 421 QAKSE---------VFTYQPEADNTLNVKKKRKHSESEQQTPVKK 456
>POMBASE|SPAC23G3.06 [details] [associations]
symbol:SPAC23G3.06 "U3 snoRNP protein Nop58 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0030515 "snoRNA binding"
evidence=ISM] [GO:0032040 "small-subunit processome" evidence=ISO]
PomBase:SPAC23G3.06 Pfam:PF01798 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0030515 GO:GO:0006364 GO:GO:0032040
eggNOG:COG1498 HOGENOM:HOG000196309 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 OrthoDB:EOG4BZRB2
PIR:T50180 RefSeq:NP_593106.1 ProteinModelPortal:Q9P7S7
IntAct:Q9P7S7 STRING:Q9P7S7 EnsemblFungi:SPAC23G3.06.1
GeneID:2541814 KEGG:spo:SPAC23G3.06 OMA:SHILARY NextBio:20802902
Uniprot:Q9P7S7
Length = 508
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 255/407 (62%), Positives = 313/407 (76%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
M +L ET AG+A+FK D+ L K + L ++ S E A ++KL++F+KFE+T +AL
Sbjct: 1 MFILTETAAGYAIFKAKDK-LLKKRDALIEDLKSPEGASNLLKLQSFAKFESTVDALDNV 59
Query: 61 TCLLESKPSKDLRKFLRTHCDGE--TLAVADSKLGNAIKDK--LKIECVHNNAVMELMRG 116
+ L+E K S L L D + TL VAD KLGNAI L+ E + +++V +L RG
Sbjct: 60 SALVEGKVSSKLSSLLEGLSDSKSSTLVVADPKLGNAINKLPGLEFEIISDSSVQDLYRG 119
Query: 117 VRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNT 176
+R L+ LISGLA DL MSLGLSHSLSR+KLKFS DKVDTMI+QAI LLDDLDKELNT
Sbjct: 120 IREHLSSLISGLAPSDLNAMSLGLSHSLSRHKLKFSPDKVDTMIVQAIALLDDLDKELNT 179
Query: 177 YAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAA 236
YAMRVREWYGWHFPE+ KIIQDN+ YA+ +K MG R+ ++ DFS+ILPEE+EA LK AA
Sbjct: 180 YAMRVREWYGWHFPEMGKIIQDNLAYARVIKAMGMRTKCSETDFSDILPEEIEATLKSAA 239
Query: 237 MISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARL 296
ISMGTE+++ DL NI L DQVL LA YRAQL +YL++RM +APNLTALVGELVGARL
Sbjct: 240 EISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQAIAPNLTALVGELVGARL 299
Query: 297 IAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKI 356
IAH GSL+NLAKQP ST+QILGAEKALFRALKTKH+TPKYGLIYHASLVGQA K+KGKI
Sbjct: 300 IAHAGSLMNLAKQPASTIQILGAEKALFRALKTKHSTPKYGLIYHASLVGQANSKNKGKI 359
Query: 357 SRSLASKTALAIRYDALGDGQ--DNSMGLENRAKLEARLRNLEGKEL 401
+R LA+K AL++R DAL D + ++GLENR ++E RLR+LEG +L
Sbjct: 360 ARVLATKAALSLRVDALSDKDTTNGNIGLENRIRVENRLRSLEGGKL 406
>WB|WBGene00020915 [details] [associations]
symbol:nol-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040019 "positive
regulation of embryonic development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] Pfam:PF01798
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040035 GO:GO:0040019 GO:GO:0040027
eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 HOGENOM:HOG000196310 OMA:DAHEQLA
GeneTree:ENSGT00550000074998 EMBL:FO081759 PIR:T32941
RefSeq:NP_491134.1 HSSP:O28191 ProteinModelPortal:O45012 SMR:O45012
STRING:O45012 PaxDb:O45012 EnsemblMetazoa:W01B11.3.1
EnsemblMetazoa:W01B11.3.2 EnsemblMetazoa:W01B11.3.3 GeneID:171901
KEGG:cel:CELE_W01B11.3 UCSC:W01B11.3 CTD:171901 WormBase:W01B11.3
InParanoid:O45012 NextBio:873175 Uniprot:O45012
Length = 487
Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
Identities = 239/427 (55%), Positives = 320/427 (74%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
MLVLFE AG+A+FK+ +E KL V+ +W+EF++AE A++ ++L +F KF+ T+ A++A
Sbjct: 1 MLVLFEVAAGYAVFKLSNEKKLKNVDNIWEEFSTAEKAQENLQLVSFKKFKTTAGAVEAT 60
Query: 61 TCLLESKPSKDLRKFLRTHCDG-ETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGVRS 119
+ + E K SK L+K L++ D E LAV D+KLGN IK+KL + CVH++++ ELMRGVR+
Sbjct: 61 SEITEGKLSKTLKKLLKSSVDETEKLAVGDAKLGNLIKEKLSLNCVHDSSINELMRGVRA 120
Query: 120 QLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAM 179
+ +L++ +++ M+L ++HSL+RYK+KF+ +K+DTMI+QA+ LLDDLDKELN Y M
Sbjct: 121 HIEDLLAEHK-EEMNAMNLAVAHSLARYKVKFNPEKIDTMIVQAVSLLDDLDKELNNYVM 179
Query: 180 RVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMIS 239
RVREWYGWHFPEL K IQD+ YAK +K +G R N D S ILPEE+E ++KE A IS
Sbjct: 180 RVREWYGWHFPELGKTIQDHQAYAKIIKAIGMRQNCINTDLSSILPEELEEKVKEDAEIS 239
Query: 240 MGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAH 299
MGT++SD+DL++IK LCDQV+ L+ YRAQL+DYLK+RM +APNLT L+GELVGARLI+H
Sbjct: 240 MGTDISDIDLIHIKGLCDQVIELSAYRAQLFDYLKNRMTALAPNLTVLLGELVGARLISH 299
Query: 300 GGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRS 359
GSL++LAK P ST+QILGAEKALFRALKTK TPKYGLIYHA L+ QA PK KGK++R
Sbjct: 300 AGSLVSLAKAPASTIQILGAEKALFRALKTKKDTPKYGLIYHAQLITQAPPKVKGKMARK 359
Query: 360 LASKTALAIRYDALGD-GQDNSMGLENRAKLEARLR--NLEGKELGRAAGSA---KGKPK 413
LA+K +LA R DAL D N +G+E RA LE LR + G ++ GS K + K
Sbjct: 360 LAAKCSLATRIDALSDESATNEIGIECRAALENVLRTESERGPSKNKSFGSHRHDKYEFK 419
Query: 414 IEVYDKD 420
E Y+ D
Sbjct: 420 SETYEYD 426
>SGD|S000005837 [details] [associations]
symbol:NOP58 "Protein involved in pre-rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0031428 "box C/D snoRNP
complex" evidence=IDA;IPI] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
SGD:S000005837 Pfam:PF01798 EMBL:BK006948 GO:GO:0030686
GO:GO:0017069 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 EMBL:X90565
GO:GO:0000480 GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310
OrthoDB:EOG4BZRB2 GO:GO:0006608 GeneTree:ENSGT00550000074998
EMBL:AF056070 EMBL:Z75217 PIR:S58322 RefSeq:NP_014955.1
ProteinModelPortal:Q12499 SMR:Q12499 DIP:DIP-5843N IntAct:Q12499
MINT:MINT-658431 STRING:Q12499 PaxDb:Q12499 PeptideAtlas:Q12499
PRIDE:Q12499 EnsemblFungi:YOR310C GeneID:854487 KEGG:sce:YOR310C
CYGD:YOR310c OMA:DLRTTPK NextBio:976810 Genevestigator:Q12499
GermOnline:YOR310C Uniprot:Q12499
Length = 511
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 245/464 (52%), Positives = 325/464 (70%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAATC 62
VL ET AG+AL K D+ K+ K L Q+ +S++ + K+ AFSKF + + AL+ A
Sbjct: 4 VLTETSAGYALLKASDK-KIYKSSSLIQDLDSSDKVLKEFKIAAFSKFNSAANALEEANS 62
Query: 63 LLESKPSKDLRKFLRT-HCDGE-TLAVADSKLGNAI-KDKLKIECVHNNAVMELMRGVRS 119
++E K S L K L D + TL V+++KL NAI K L V + +++ R ++
Sbjct: 63 IIEGKVSSQLEKLLEEIKKDKKSTLIVSETKLANAINKLGLNFNVVSDAVTLDIYRAIKE 122
Query: 120 QLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAM 179
L EL+ G++ DL MSLGL+HS+ R+KLKFSADKVD MIIQAI LLDDLDKELNTYAM
Sbjct: 123 YLPELLPGMSDNDLSKMSLGLAHSIGRHKLKFSADKVDVMIIQAIALLDDLDKELNTYAM 182
Query: 180 RVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMIS 239
R +EWYGWHFPELAKI+ D++ YA+ + MG RS A++ D SEILPEE+E ++K AA +S
Sbjct: 183 RCKEWYGWHFPELAKIVTDSVAYARIILTMGIRSKASETDLSEILPEEIEERVKTAAEVS 242
Query: 240 MGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAH 299
MGTE++ DL NI L +Q++ A YR QL +YL +RM +APNLT LVGELVGARLIAH
Sbjct: 243 MGTEITQTDLDNINALAEQIVEFAAYREQLSNYLSARMKAIAPNLTQLVGELVGARLIAH 302
Query: 300 GGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRS 359
GSL++LAK P ST+QILGAEKALFRALKTKH TPKYGL+YHASLVGQA K+KGKI+R
Sbjct: 303 SGSLISLAKSPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQATGKNKGKIARV 362
Query: 360 LASKTALAIRYDALGDGQDNS--MGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVY 417
LA+K A+++RYDAL + +D+S +GLE+RAK+E RL LEG++L + PK+
Sbjct: 363 LAAKAAVSLRYDALAEDRDDSGDIGLESRAKVENRLSQLEGRDL-------RTTPKVV-- 413
Query: 418 DKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEE 461
++ KK +T A+ YN AD+ ++ + DDEE+ +E
Sbjct: 414 -REAKK---VEMTEARAYNADADTAKAASDSESDSDDEEEEKKE 453
>DICTYBASE|DDB_G0268098 [details] [associations]
symbol:nop58 "nucleolar protein 58" species:44689
"Dictyostelium discoideum" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0268098 Pfam:PF01798
GenomeReviews:CM000150_GR GO:GO:0005730 EMBL:AAFI02000003
GO:GO:0042254 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 RefSeq:XP_647549.1 ProteinModelPortal:Q55FI4
STRING:Q55FI4 PRIDE:Q55FI4 EnsemblProtists:DDB0305289
GeneID:8616357 KEGG:ddi:DDB_G0268098 KO:K14565 OMA:HTELTEY
Uniprot:Q55FI4
Length = 638
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 247/469 (52%), Positives = 318/469 (67%)
Query: 1 MLVLFETPAGFALFKVLDEGKL-SKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKA 59
MLVLFET AGFALFKVLDEGK+ SK + F + E A V LK F KF+ T +AL+A
Sbjct: 1 MLVLFETSAGFALFKVLDEGKMKSKPVDINNFFETPEKASSFVSLKKFYKFDGTLDALEA 60
Query: 60 ATCLLESKPSKDLRKFLRTHCDGETL----AVADSKLGNAIKDKLKIECVHNNAVMELMR 115
T + E K + L FL+ + E L V+DSK GNAIKD L I+ + ++ EL+R
Sbjct: 61 QTAIAECKVPESLSNFLKKNVVSEKLNEQLIVSDSKFGNAIKDALNIKVLCDDTTQELIR 120
Query: 116 GVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELN 175
G+R QL L++ QDL MS+GLSHS SRYKLKFS DKVDTMI+QAI LLDDL E+N
Sbjct: 121 GIRLQLKSLVNANE-QDLNAMSIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEIN 179
Query: 176 TYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEA 235
YAMR REWYGWHFPEL K+I ++ YA A+K MG+R +A DF++ILPEEV ++KEA
Sbjct: 180 IYAMRAREWYGWHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILPEEVAEEVKEA 239
Query: 236 AMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGAR 295
A ISMGTE+S DL +I LCDQ LS+ Y +L +YLKSRM +APNLT LVGE+VGAR
Sbjct: 240 AQISMGTEISPEDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEIVGAR 299
Query: 296 LIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGK 355
LI GSL+NLAK P ST+QILGAEKALFRALKTKH TPKYGLIY+A +VG+A+ K+KGK
Sbjct: 300 LICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTPKYGLIYNAKIVGEASLKNKGK 359
Query: 356 ISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIE 415
+SR LA+K AL+ R+DAL + D S G+ + ++ R +EG+E+ ++ + K +
Sbjct: 360 MSRVLAAKAALSARFDALCEVSDTSYGIAYKGAVDRRAAAIEGREVRKSLNAVKPEKSGN 419
Query: 416 VYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEEVAA 464
V D K T T + A S E++ ++ ++ MEE ++
Sbjct: 420 VAKYDHTKSA----TTNTTRDVATKSS---KESSIKQEKQDVKMEEASS 461
>ASPGD|ASPL0000037939 [details] [associations]
symbol:nop58 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
Pfam:PF01798 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 RefSeq:XP_660771.1
ProteinModelPortal:Q5B8G3 STRING:Q5B8G3
EnsemblFungi:CADANIAT00009903 GeneID:2873782 KEGG:ani:AN3167.2
HOGENOM:HOG000196310 OMA:LNDNIAY OrthoDB:EOG4BZRB2 Uniprot:Q5B8G3
Length = 586
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 243/455 (53%), Positives = 311/455 (68%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
+ +L ET AG+AL K D+ KL K + L E ++AE ++KLK+F KF++ + AL+
Sbjct: 3 LFILTETSAGYALLKAKDK-KLLKRDDLATEASTAEGVSNLLKLKSFQKFDSATAALEEV 61
Query: 61 TCLLESKPSKDLRKFLRTHCDGE--TLAVADSKLGNAIKDK--LKIECVHNNAVMELMRG 116
++E K + L L D + +LAVAD KLGNAI L I + ++ ++ R
Sbjct: 62 ASVVEGKVTPRLASLLDEIKDEKKVSLAVADPKLGNAIGKLPGLDISLIADSTTADIYRA 121
Query: 117 VRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNT 176
+R L LI GL QD+ MSLGLSHSL+R+KLKFS DK+DTMI+QAIGLLDDLDKELN
Sbjct: 122 IREHLPTLIPGLLPQDMSTMSLGLSHSLARHKLKFSPDKIDTMIVQAIGLLDDLDKELNN 181
Query: 177 YAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAA 236
YAMRV+EWYGWHFPELAKI+ DNI Y++ V MG RSN D +EILPEE+EA +K AA
Sbjct: 182 YAMRVKEWYGWHFPELAKILNDNIAYSRLVLKMGMRSNFENADLAEILPEEIEAAVKAAA 241
Query: 237 MISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARL 296
SMGTE+S+ DL NI+ L +QV+ +EYR+QL Y+ +RMN +APNLTALVG+LVGARL
Sbjct: 242 DRSMGTEISEDDLENIQALAEQVVGFSEYRSQLAGYITARMNAIAPNLTALVGDLVGARL 301
Query: 297 IAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKI 356
IAH GSL NL+K P ST+QILGAEKALFRALKTKH TPKYGLIYHASL+GQA K+KGK+
Sbjct: 302 IAHAGSLTNLSKSPASTLQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKM 361
Query: 357 SRSLASKTALAIRYDALGDGQDN-------SMGLENRAKLEARLRNLEGKELGRAAGSAK 409
+R LA+K +L +R DAL + D+ ++G E R LE +L LEGK L
Sbjct: 362 ARVLAAKASLGLRVDALAEWDDDVTEEDKAALGTEARFNLERKLAALEGKPL-------- 413
Query: 410 GKPK-IEVYDKDRKKGPGAM-ITAAKTYNPAADSI 442
KP+ + + PG I A+ YNP AD++
Sbjct: 414 -KPRGVAIGPDGASAQPGKFNINEARKYNPDADAV 447
>UNIPROTKB|G4MPA1 [details] [associations]
symbol:MGG_07008 "Nucleolar protein nop-58" species:242507
"Magnaporthe oryzae 70-15" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030515 "snoRNA binding"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
Pfam:PF01798 GO:GO:0005730 GO:GO:0030515 EMBL:CM001231
GO:GO:0030686 GO:GO:0006364 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 GO:GO:0005732 GO:GO:0031428
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 KO:K14565
RefSeq:XP_003709766.1 ProteinModelPortal:G4MPA1
EnsemblFungi:MGG_07008T0 GeneID:2685181 KEGG:mgr:MGG_07008
Uniprot:G4MPA1
Length = 599
Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
Identities = 251/484 (51%), Positives = 323/484 (66%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
+L+L ET AG+ LFK D+ KL + L ++AE Q +KLK F K+++ + A+
Sbjct: 3 LLILAETSAGYGLFKARDK-KLLSADDLESRLDTAEKINQELKLKEFVKWDSAAAAVGEI 61
Query: 61 TCLLESKPSKDLRKFLRTHCDGE--TLAVADSKLGNAIK--DKLK--IECVHNNAVMELM 114
LLE K L K + T D + +LAVAD +G A++ L E ++ +L
Sbjct: 62 GALLEGKVPPMLAKLMETVKDEKKVSLAVADKNIGVALQRIPGLSNITEINSGSSTTDLY 121
Query: 115 RGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKEL 174
RG+R+ L++LI G+ ++ + MSLGLSHSLSR+KL+FSADKVD MIIQAI LLDDLDKEL
Sbjct: 122 RGIRTHLSDLIPGILPENFKTMSLGLSHSLSRHKLRFSADKVDVMIIQAINLLDDLDKEL 181
Query: 175 NTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKE 234
NTYAMRV+EWYGWHFPEL KI+ DN+ YA+ + +G RSNA K+D SEILPEE+E +K
Sbjct: 182 NTYAMRVKEWYGWHFPELGKILNDNLAYARVILTLGMRSNATKVDLSEILPEEIETAVKA 241
Query: 235 AAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGA 294
AA +SMGTE+S+ DL NI L +QV+S +EYRAQL YL +RM +AP+LT LVG LVGA
Sbjct: 242 AADLSMGTEISEEDLENITLLAEQVVSYSEYRAQLSSYLDARMRAIAPSLTELVGFLVGA 301
Query: 295 RLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKG 354
RLIAH GSL+NLAK PGST+QILGAEKALFRALKTKHATPKYGLIYHASLVGQA K+KG
Sbjct: 302 RLIAHAGSLMNLAKNPGSTIQILGAEKALFRALKTKHATPKYGLIYHASLVGQATGKNKG 361
Query: 355 KISRSLASKTALAIRYDALG---DGQDNS------MGLENRAKLEARLRNLEGKEL---G 402
KI+R LA+K AL +R DAL DG++ G RAK+E+ LR LEGK + G
Sbjct: 362 KIARQLAAKAALGVRSDALTEFKDGEEADEEARAVFGATQRAKVESNLRRLEGKPILAKG 421
Query: 403 RAAG-SAKGKPKIEVYD-KDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPME 460
G + K P +D K+ +K A +A++ + + + K E P E
Sbjct: 422 VTVGPNGKAAPAPSKWDVKEARKYNVDADGLAGNEPASAETPVKEFKKKSKKAKEPSPDE 481
Query: 461 EVAA 464
E A+
Sbjct: 482 EDAS 485
>GENEDB_PFALCIPARUM|PF10_0085 [details] [associations]
symbol:PF10_0085 "nucleolar protein NOP5,
putative" species:5833 "Plasmodium falciparum" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] Pfam:PF01798
GO:GO:0003723 EMBL:AE014185 GO:GO:0006364 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 KO:K14565 HOGENOM:HOG000196310 OMA:DLRTTPK
HSSP:O28191 RefSeq:XP_001347370.1 ProteinModelPortal:Q8IJV7
PRIDE:Q8IJV7 EnsemblProtists:PF10_0085:mRNA GeneID:810243
KEGG:pfa:PF10_0085 EuPathDB:PlasmoDB:PF3D7_1008800
ProtClustDB:CLSZ2432650 Uniprot:Q8IJV7
Length = 469
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 221/442 (50%), Positives = 297/442 (67%)
Query: 1 MLVLFETPAGFALFKVLDEGKL--SKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALK 58
ML+L ET AG+ LFKV + KL S V+ + + F ++E AR+ V L +FSKF+ A
Sbjct: 1 MLILVETAAGYGLFKV-ENSKLIESDVKDIEKCFVTSEEARKNVSLYSFSKFKKFQNAFD 59
Query: 59 AATCLLESKPSKDLRKFLRTHCD----GETLAVADSKLGNAIKDKLKIECVHNNAVMELM 114
L+ESK K L+KFL+ + E LA+ D LG IK K I + N+ E++
Sbjct: 60 ETNKLMESKLGKGLKKFLKKNIIKPKLNEPLALCDKTLGGLIKKKYNINVTYTNSTQEII 119
Query: 115 RGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKEL 174
RG+R+ L EL+ G+ +D + + L LSHSL+R+KLKFSADKVD MI+QA+GLL+DLDKE+
Sbjct: 120 RGIRTHLYELLVGVNEEDSKLLKLSLSHSLNRFKLKFSADKVDVMIVQAVGLLEDLDKEI 179
Query: 175 NTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKE 234
N ++MR++EWYGWHFPEL K+I DN +YAK VKL+G R+NA ++ E EE++ ++K+
Sbjct: 180 NVFSMRLKEWYGWHFPELGKVITDNKIYAKCVKLIGFRNNAKNVNLLEETTEEIQKEIKQ 239
Query: 235 AAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGA 294
A ISMGTE+ D DL I EL D++L L +YR L YLK RMN++APNLT LVG+LVGA
Sbjct: 240 LAEISMGTEIEDDDLNCINELADRLLELTDYRESLATYLKYRMNSIAPNLTYLVGDLVGA 299
Query: 295 RLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKG 354
+LIA GSL++LAK P ST+QILG+EKALFRALKTK TPKYGLIYHA+LVGQ APK KG
Sbjct: 300 KLIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTPKYGLIYHATLVGQTAPKLKG 359
Query: 355 KISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKI 414
+ISRSLA+K +L R DALG+ + S+ + ++ LE RL + L + + K
Sbjct: 360 RISRSLAAKLSLCTRVDALGNFVEPSIAITCKSHLEKRLEYITSN-LQKKLSNPNNNVKA 418
Query: 415 EVYDKDRKKGPGAMITAAKTYN 436
+ + K P +N
Sbjct: 419 QQQGQQNKYNPNQKNDGQNNFN 440
>UNIPROTKB|Q8IJV7 [details] [associations]
symbol:PF10_0085 "Nucleolar protein NOP5, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006364 "rRNA processing" evidence=ISS] Pfam:PF01798
GO:GO:0003723 EMBL:AE014185 GO:GO:0006364 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 KO:K14565 HOGENOM:HOG000196310 OMA:DLRTTPK
HSSP:O28191 RefSeq:XP_001347370.1 ProteinModelPortal:Q8IJV7
PRIDE:Q8IJV7 EnsemblProtists:PF10_0085:mRNA GeneID:810243
KEGG:pfa:PF10_0085 EuPathDB:PlasmoDB:PF3D7_1008800
ProtClustDB:CLSZ2432650 Uniprot:Q8IJV7
Length = 469
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 221/442 (50%), Positives = 297/442 (67%)
Query: 1 MLVLFETPAGFALFKVLDEGKL--SKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALK 58
ML+L ET AG+ LFKV + KL S V+ + + F ++E AR+ V L +FSKF+ A
Sbjct: 1 MLILVETAAGYGLFKV-ENSKLIESDVKDIEKCFVTSEEARKNVSLYSFSKFKKFQNAFD 59
Query: 59 AATCLLESKPSKDLRKFLRTHCD----GETLAVADSKLGNAIKDKLKIECVHNNAVMELM 114
L+ESK K L+KFL+ + E LA+ D LG IK K I + N+ E++
Sbjct: 60 ETNKLMESKLGKGLKKFLKKNIIKPKLNEPLALCDKTLGGLIKKKYNINVTYTNSTQEII 119
Query: 115 RGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKEL 174
RG+R+ L EL+ G+ +D + + L LSHSL+R+KLKFSADKVD MI+QA+GLL+DLDKE+
Sbjct: 120 RGIRTHLYELLVGVNEEDSKLLKLSLSHSLNRFKLKFSADKVDVMIVQAVGLLEDLDKEI 179
Query: 175 NTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKE 234
N ++MR++EWYGWHFPEL K+I DN +YAK VKL+G R+NA ++ E EE++ ++K+
Sbjct: 180 NVFSMRLKEWYGWHFPELGKVITDNKIYAKCVKLIGFRNNAKNVNLLEETTEEIQKEIKQ 239
Query: 235 AAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGA 294
A ISMGTE+ D DL I EL D++L L +YR L YLK RMN++APNLT LVG+LVGA
Sbjct: 240 LAEISMGTEIEDDDLNCINELADRLLELTDYRESLATYLKYRMNSIAPNLTYLVGDLVGA 299
Query: 295 RLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKG 354
+LIA GSL++LAK P ST+QILG+EKALFRALKTK TPKYGLIYHA+LVGQ APK KG
Sbjct: 300 KLIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTPKYGLIYHATLVGQTAPKLKG 359
Query: 355 KISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKI 414
+ISRSLA+K +L R DALG+ + S+ + ++ LE RL + L + + K
Sbjct: 360 RISRSLAAKLSLCTRVDALGNFVEPSIAITCKSHLEKRLEYITSN-LQKKLSNPNNNVKA 418
Query: 415 EVYDKDRKKGPGAMITAAKTYN 436
+ + K P +N
Sbjct: 419 QQQGQQNKYNPNQKNDGQNNFN 440
>TAIR|locus:2205270 [details] [associations]
symbol:NOP56 "homolog of nucleolar protein NOP56"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] Pfam:PF01798 EMBL:CP002684
GO:GO:0009506 GO:GO:0005618 GO:GO:0005730 UniGene:At.48973
EMBL:AC009894 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 HSSP:O28191 ProtClustDB:CLSN2682875 EMBL:AF302492
EMBL:AY039541 EMBL:AY102151 EMBL:AY087080 IPI:IPI00548989
PIR:D96602 RefSeq:NP_176007.1 UniGene:At.22033
ProteinModelPortal:Q9SGT7 SMR:Q9SGT7 IntAct:Q9SGT7 STRING:Q9SGT7
PRIDE:Q9SGT7 EnsemblPlants:AT1G56110.1 GeneID:842063
KEGG:ath:AT1G56110 TAIR:At1g56110 InParanoid:Q9SGT7 OMA:GSHITEA
PhylomeDB:Q9SGT7 Genevestigator:Q9SGT7 Uniprot:Q9SGT7
Length = 522
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 188/408 (46%), Positives = 273/408 (66%)
Query: 1 MLVLFETPAGFALFKV--LDE-GKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEAL 57
M V++E+ +G+ LF+V LDE G+ E + + ++V+L AF FE+ +AL
Sbjct: 3 MYVIYESSSGYGLFEVHGLDEIGQ--NTEAVRTSVSDLSRFGRVVQLTAFHPFESALDAL 60
Query: 58 KAATCLLESKPSKDLRKFLRTHC----DGE----TLAVADSKLGNAIKDKLKIECVHNNA 109
+ E + +LR FL + +G+ +L +A+ KLG+ I + KI C N
Sbjct: 61 NQVNAVSEGVMTDELRSFLELNLPKVKEGKKPKFSLGLAEPKLGSHIFEATKIPCQSNEF 120
Query: 110 VMELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDD 169
V+EL+RGVR I L DL+ LGL+HS SR K+KF+ ++VD M+IQAI +LD
Sbjct: 121 VLELLRGVRQHFDRFIKDLKPGDLEKSQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDT 180
Query: 170 LDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDF---SEILPE 226
LDK++N++AMRVREWY WHFPEL KI+ DN LYA+ K++ D+S + +E+L +
Sbjct: 181 LDKDINSFAMRVREWYSWHFPELVKIVNDNYLYARVSKMIDDKSKLTEDHIPMLTEVLGD 240
Query: 227 EVEA-QLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLT 285
E +A ++ EA SMG+++S LDL+N++ +V+ LA+YR +LYDYL ++M+ +APNL
Sbjct: 241 EDKAKEVIEAGKASMGSDLSPLDLINVQTFAQKVMDLADYRKKLYDYLVTKMSDIAPNLA 300
Query: 286 ALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLV 345
AL+GE+VGARLI+H GSL NLAK P ST+QILGAEKALFRALKT+ TPKYGLI+H+S +
Sbjct: 301 ALIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFI 360
Query: 346 GQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL 393
G+A+ K+KG+I+R LA+K ++A R D DG + G + R ++E RL
Sbjct: 361 GRASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKLREQVEERL 408
>TAIR|locus:2087755 [details] [associations]
symbol:AT3G12860 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0042991 "transcription factor
import into nucleus" evidence=RCA] Pfam:PF01798 EMBL:CP002686
GO:GO:0003676 GO:GO:0030529 EMBL:AB024033 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 OMA:QEAPQEN HSSP:O28191
IPI:IPI00527919 RefSeq:NP_187892.2 UniGene:At.53283
ProteinModelPortal:Q9LTV0 SMR:Q9LTV0 STRING:Q9LTV0 PRIDE:Q9LTV0
EnsemblPlants:AT3G12860.1 GeneID:820468 KEGG:ath:AT3G12860
TAIR:At3g12860 InParanoid:Q9LTV0 PhylomeDB:Q9LTV0
ProtClustDB:CLSN2682875 ArrayExpress:Q9LTV0 Genevestigator:Q9LTV0
Uniprot:Q9LTV0
Length = 499
Score = 867 (310.3 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 181/404 (44%), Positives = 266/404 (65%)
Query: 3 VLFETPAGFALFKVLDEGKLSK-VEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAAT 61
+L E+P+G+ LF+ ++ + E + + ++V+L AF F++ +AL
Sbjct: 5 LLSESPSGYGLFEGHGSDEIGQNTEAVRSSVSDLSRFGRVVQLTAFHPFQSALDALNQIN 64
Query: 62 CLLESKPSKDLRKFLRTHC----DGE----TLAVADSKLGNAIKDKLKIECVHNNAVMEL 113
+ E S +LR FL + +G+ +L V++ K+G+ I + KI C N V EL
Sbjct: 65 AVSEGYMSDELRSFLELNLPKVKEGKKPKFSLGVSEPKIGSCIFEATKIPCQSNEFVHEL 124
Query: 114 MRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKE 173
+RGVR I L DL+ LGL+HS SR K+KF+ ++VD M+IQAI +LD LDK+
Sbjct: 125 LRGVRQHFDRFIKDLKPGDLEKAQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKD 184
Query: 174 LNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDF---SEILPEEVEA 230
+N++AMRVREWY WHFPEL KI+ DN LYAK K++ D+S ++ +E L +E +A
Sbjct: 185 INSFAMRVREWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIPMLTEALGDEDKA 244
Query: 231 -QLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVG 289
++ EA SMG ++S +DL+N++ +V+ LA+YR +LYDYL ++M+ +APNL AL+G
Sbjct: 245 REVIEAGKASMGQDLSPVDLINVQTFAQRVMDLADYRKKLYDYLVTKMSDIAPNLAALIG 304
Query: 290 ELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAA 349
E+VGARLI+H GSL NLAK P ST+QILGAEKALFRALKT+ TPKYGLI+H+S +G+A+
Sbjct: 305 EMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRAS 364
Query: 350 PKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL 393
K+KG+I+R LA+K ++A R D D + G + R ++E RL
Sbjct: 365 AKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKLREQVEERL 408
Score = 40 (19.1 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 393 LRNLEGKELG-RAAGSAKGKPKIEVYDKDRKK 423
L NLE K+ G + +++ K K + +K+ +K
Sbjct: 428 LENLEKKDEGEKTVDASEKKKKRKTEEKEEEK 459
>MGI|MGI:1914384 [details] [associations]
symbol:Nop56 "NOP56 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030515 "snoRNA binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070761 "pre-snoRNP
complex" evidence=ISO] Reactome:REACT_93132 MGI:MGI:1914384
Pfam:PF01798 GO:GO:0005737 GO:GO:0005730 GO:GO:0030515
GO:GO:0042254 GO:GO:0070761 GO:GO:0005732 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 OMA:QEAPQEN ChiTaRS:NOP56
EMBL:AK009799 EMBL:AK011481 EMBL:AK077795 EMBL:AK150258
EMBL:BC002231 EMBL:BC021355 IPI:IPI00318048 RefSeq:NP_077155.2
UniGene:Mm.29363 ProteinModelPortal:Q9D6Z1 SMR:Q9D6Z1 IntAct:Q9D6Z1
STRING:Q9D6Z1 PhosphoSite:Q9D6Z1 PaxDb:Q9D6Z1 PRIDE:Q9D6Z1
Ensembl:ENSMUST00000103198 GeneID:67134 KEGG:mmu:67134
GeneTree:ENSGT00550000075068 InParanoid:Q9D6Z1 NextBio:323680
Bgee:Q9D6Z1 CleanEx:MM_NOL5A Genevestigator:Q9D6Z1
GermOnline:ENSMUSG00000027405 Uniprot:Q9D6Z1
Length = 580
Score = 847 (303.2 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
Identities = 184/410 (44%), Positives = 263/410 (64%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQE-FNSAESARQIVKLKAFSKFENTSEALKAAT 61
VLFE G+AL + + ++S + +E + +V+L AF F ++ AL+ A
Sbjct: 6 VLFEHAVGYALLALKEVEEISLLLPQVEECVLNLGKFHNVVRLVAFCPFSSSQVALENAN 65
Query: 62 CLLESKPSKDLRKFLRTHCDGET----LAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
+ E +DLR L T+ + L V D K+G AI+++L C + E++RGV
Sbjct: 66 AVSEGVVHEDLRLLLETYLPSKKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGV 125
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
R L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LDK++NT+
Sbjct: 126 RLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTF 185
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEVEAQ-LK 233
+MRVREWYG+HFPEL KI+ DN Y + + +G+R N KL+ EI + +A+ +
Sbjct: 186 SMRVREWYGYHFPELVKIVNDNATYCRLAQFIGNRRELNEEKLEKLEEITMDGAKAKAIL 245
Query: 234 EAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVG 293
+A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL+GE VG
Sbjct: 246 DASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVG 305
Query: 294 ARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHK 353
ARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+AA K+K
Sbjct: 306 ARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNK 365
Query: 354 GKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 403
G+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
Score = 45 (20.9 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 408 AKGKPKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEK--PMEEVAA 464
+K K K++ + + P ++ + K P + L E A S +K P EEVA+
Sbjct: 478 SKKKKKLKPQENGMEDPPVSLPKSKKKKAPKEELASDLEEMATSSAKRKKSSPKEEVAS 536
>SGD|S000004187 [details] [associations]
symbol:NOP56 "Nucleolar protein component of the box C/D
snoRNP complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0031428
"box C/D snoRNP complex" evidence=IDA;IPI] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0000154 "rRNA modification"
evidence=TAS] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] SGD:S000004187
Pfam:PF01798 EMBL:BK006945 GO:GO:0030686 GO:GO:0032040 EMBL:U14913
GO:GO:0000154 GO:GO:0031428 eggNOG:COG1498 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 OMA:QEAPQEN
GeneTree:ENSGT00550000075068 OrthoDB:EOG42FWS6 EMBL:U20237
PIR:S48550 RefSeq:NP_013298.1 ProteinModelPortal:Q12460 SMR:Q12460
DIP:DIP-4405N IntAct:Q12460 MINT:MINT-525679 STRING:Q12460
PaxDb:Q12460 PeptideAtlas:Q12460 EnsemblFungi:YLR197W GeneID:850894
KEGG:sce:YLR197W CYGD:YLR197w NextBio:967272 Genevestigator:Q12460
GermOnline:YLR197W Uniprot:Q12460
Length = 504
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 193/447 (43%), Positives = 284/447 (63%)
Query: 3 VLFETPAGFALFKV-LDEGKL-SKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
+LFE P G+A+FKV L + + S+++ + ++ N + ++++L +F+ F+ +EAL+ A
Sbjct: 7 LLFEEPTGYAVFKVKLQQDDIGSRLKEVQEQINDFGAFTKLIELVSFAPFKGAAEALENA 66
Query: 61 TCLLESKPSKDLRKFLRTHCDGE-------TLAVADSKLGNAIKDKLK-IECVHNNAVME 112
+ E S+ L+ L + TLA++D LG +IK++ ++C+ N +
Sbjct: 67 NDISEGLVSESLKAILDLNLPKASSKKKNITLAISDKNLGPSIKEEFPYVDCISNELAQD 126
Query: 113 LMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDK 172
L+RGVR +L GL DL+ LGL H+ SR K+KFS K D IIQAI LLD LDK
Sbjct: 127 LIRGVRLHGEKLFKGLQSGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDK 186
Query: 173 ELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKL-DFSEILPEE-- 227
++NT+AMRV+EWYGWHFPELAK++ DN +AK V + D++ N L D + +L E+
Sbjct: 187 DINTFAMRVKEWYGWHFPELAKLVPDNYTFAKLVLFIKDKASLNDDSLHDLAALLNEDSG 246
Query: 228 VEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 287
+ ++ + A ISMG ++S+ D+ N+ +V SLA+YR QLYDYL +M+TVAPNL+ L
Sbjct: 247 IAQRVIDNARISMGQDISETDMENVCVFAQRVASLADYRRQLYDYLCEKMHTVAPNLSEL 306
Query: 288 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 347
+GE++GARLI+H GSL NL+KQ STVQILGAEKALFRALKTK TPKYGLIYH+ + +
Sbjct: 307 IGEVIGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFISK 366
Query: 348 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLE-GKELGRAAG 406
A+ K+KG+ISR LA+K ++A R D + N G + ++E RL GK +
Sbjct: 367 ASAKNKGRISRYLANKCSMASRIDNYSEEPSNVFGSVLKKQVEQRLEFYNTGKPTLK--N 424
Query: 407 SAKGKPKIEVYDKDRKKGPGAMITAAK 433
+ +E+Y+KD+ P A + K
Sbjct: 425 ELAIQEAMELYNKDK---PAAEVEETK 448
>UNIPROTKB|O00567 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9606 "Homo
sapiens" [GO:0008219 "cell death" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0006364 "rRNA processing"
evidence=TAS] [GO:0030515 "snoRNA binding" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IDA] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] Reactome:REACT_17015 Pfam:PF01798
GO:GO:0005737 GO:GO:0008219 GO:GO:0030515 GO:GO:0070761
GO:GO:0006364 GO:GO:0031428 EMBL:AL049712 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 EMBL:Y12065 EMBL:BC104791
EMBL:BC104793 IPI:IPI00411937 RefSeq:NP_006383.2 UniGene:Hs.376064
ProteinModelPortal:O00567 SMR:O00567 IntAct:O00567 STRING:O00567
PhosphoSite:O00567 SWISS-2DPAGE:O00567 PaxDb:O00567 PRIDE:O00567
Ensembl:ENST00000329276 GeneID:10528 KEGG:hsa:10528 UCSC:uc002wgh.3
GeneCards:GC20P002698 HGNC:HGNC:15911 HPA:HPA049918 MIM:614153
MIM:614154 neXtProt:NX_O00567 Orphanet:276198 PharmGKB:PA164724063
InParanoid:O00567 OMA:QEAPQEN PhylomeDB:O00567 ChiTaRS:NOP56
GenomeRNAi:10528 NextBio:39942 ArrayExpress:O00567 Bgee:O00567
Genevestigator:O00567 GermOnline:ENSG00000101361 Uniprot:O00567
Length = 594
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 186/410 (45%), Positives = 264/410 (64%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQE-FNSAESARQIVKLKAFSKFENTSEALKAAT 61
VLFE G+AL + + ++S ++ +E + IV+L AF F ++ AL+ A
Sbjct: 6 VLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVALENAN 65
Query: 62 CLLESKPSKDLRKFLRTHCDGET----LAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
+ E +DLR L TH + L V D K+G AI+++L C + E++RGV
Sbjct: 66 AVSEGVVHEDLRLLLETHLPSKKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGV 125
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
R L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LDK++NT+
Sbjct: 126 RLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTF 185
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEVEAQ-LK 233
+MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ E+ + +A+ +
Sbjct: 186 SMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEDKLEKLEELTMDGAKAKAIL 245
Query: 234 EAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVG 293
+A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL+GE VG
Sbjct: 246 DASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVG 305
Query: 294 ARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHK 353
ARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+AA K+K
Sbjct: 306 ARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNK 365
Query: 354 GKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 403
G+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>UNIPROTKB|F1MW06 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9913 "Bos
taurus" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=IEA] Pfam:PF01798
IPI:IPI00712128 UniGene:Bt.49005 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN GeneTree:ENSGT00550000075068
EMBL:DAAA02036191 Ensembl:ENSBTAT00000025042 Uniprot:F1MW06
Length = 596
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 186/410 (45%), Positives = 263/410 (64%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQE-FNSAESARQIVKLKAFSKFENTSEALKAAT 61
VLFE G+AL + + ++S + +E + IV+L AF F ++ AL+ A
Sbjct: 6 VLFEHAVGYALLALKEVEEISLLLPQVEECVLNLGKFHNIVRLVAFCPFSSSQVALENAN 65
Query: 62 CLLESKPSKDLRKFLRTHCDGET----LAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
+ E +DLR L TH + L V D K+G AI+++L C + E++RGV
Sbjct: 66 AVSEGVVHEDLRLLLETHLPPKKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGV 125
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
R L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LDK++NT+
Sbjct: 126 RLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTF 185
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEVEAQ-LK 233
+MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ E+ + +A+ +
Sbjct: 186 SMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEEKLEKLEELTMDAAKAKAIL 245
Query: 234 EAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVG 293
+A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL+GE VG
Sbjct: 246 DASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVG 305
Query: 294 ARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHK 353
ARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+AA K+K
Sbjct: 306 ARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNK 365
Query: 354 GKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 403
G+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>UNIPROTKB|E2QU53 [details] [associations]
symbol:NOP56 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070761 "pre-snoRNP complex" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=IEA] Pfam:PF01798
GO:GO:0030515 GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN GeneTree:ENSGT00550000075068
EMBL:AAEX03013839 Ensembl:ENSCAFT00000010731 Uniprot:E2QU53
Length = 597
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 186/410 (45%), Positives = 263/410 (64%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQE-FNSAESARQIVKLKAFSKFENTSEALKAAT 61
VLFE G+AL + + ++S + +E + IV+L AF F ++ AL+ A
Sbjct: 6 VLFEHAVGYALLALKEVEEISLLLPQVEECVLNLGKFHNIVRLVAFCPFASSQVALENAN 65
Query: 62 CLLESKPSKDLRKFLRTHCDGET----LAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
+ E +DLR L TH + L V D K+G AI+++L C + E++RGV
Sbjct: 66 AVSEGVVHEDLRLLLETHLPSKKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGV 125
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
R L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LDK++NT+
Sbjct: 126 RLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTF 185
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEVEAQ-LK 233
+MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ E+ + +A+ +
Sbjct: 186 SMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEELTMDGAKAKAIL 245
Query: 234 EAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVG 293
+A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL+GE VG
Sbjct: 246 DASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVG 305
Query: 294 ARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHK 353
ARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+AA K+K
Sbjct: 306 ARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNK 365
Query: 354 GKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 403
G+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>ZFIN|ZDB-GENE-040109-1 [details] [associations]
symbol:nop56 "NOP56 ribonucleoprotein homolog"
species:7955 "Danio rerio" [GO:0007507 "heart development"
evidence=IMP] Pfam:PF01798 ZFIN:ZDB-GENE-040109-1 GO:GO:0007507
HOGENOM:HOG000196309 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 GeneTree:ENSGT00550000075068 HOVERGEN:HBG007270
EMBL:CT027620 EMBL:AY648814 IPI:IPI00932106 UniGene:Dr.76899
STRING:Q6DRE5 Ensembl:ENSDART00000114524 InParanoid:Q6DRE5
OMA:LINIECF Uniprot:Q6DRE5
Length = 548
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 205/484 (42%), Positives = 296/484 (61%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQE--FNSAESARQIVKLKAFSKFENTSEALKAA 60
VLFE AG+AL V + ++ + +E N + + +VKL AF F++ AL+
Sbjct: 6 VLFEHAAGYALLAVKEVEEIGMLLPQVEESVLNVGKFS-SVVKLSAFFPFKSAQGALENI 64
Query: 61 TCLLESKPSKDLRKFLRTHCD--GET---LAVADSKLGNAIKDKLKIECVHNNAVMELMR 115
+ E DL+ FL T+ G+ L V+D+KLG A++++L + V E++R
Sbjct: 65 NAVSEGVVHADLKLFLETNLPSGGKKKPMLGVSDAKLGAALQEELNLSIQTGGVVAEIIR 124
Query: 116 GVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELN 175
GVR L+ GL Q LGL HS SR K+KF+ ++ D MIIQ+I LLD LDK++N
Sbjct: 125 GVRLHFHSLVKGLTAQAASKAQLGLGHSYSRAKVKFNVNRADNMIIQSIALLDQLDKDIN 184
Query: 176 TYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAK--LD-FSEILPEEVEAQ- 231
T++MRVREWYG+HFPEL KI+ DN Y K KL+G+R ++ L+ EI + +AQ
Sbjct: 185 TFSMRVREWYGYHFPELIKIVSDNSTYCKLAKLIGNRKELSEEMLEAMEEITMDSAKAQA 244
Query: 232 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 291
+ +A+ SMG ++S +DL+NI+ +V+SL +YR +L +YL+S+M VAPNL AL+GE+
Sbjct: 245 ILDASRSSMGMDISPIDLINIECFSSRVVSLTDYRQELQEYLRSKMGQVAPNLAALIGEV 304
Query: 292 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 351
VGARLI+H GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+AA K
Sbjct: 305 VGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAK 364
Query: 352 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL----------RNLEG-KE 400
+KG+ISR LA+K +A R D + + G + R ++E RL +NL+ KE
Sbjct: 365 NKGRISRYLANKCTIASRIDCFSEVPTSVFGDKLRDQVEERLAFYETGEAPRKNLDVMKE 424
Query: 401 LGRAAG--SAKGKPKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMEN-AASKDDEEK 457
A +A+ K K+E +K +KK + A T ++ + EN A+K ++K
Sbjct: 425 AVAQASEVAAEIKRKLEKKEKKKKKRQ-KKLEALSTAEGDEETNGDVEENEVATKKKKKK 483
Query: 458 PMEE 461
E
Sbjct: 484 QAAE 487
>UNIPROTKB|Q4KLK7 [details] [associations]
symbol:Nol5a "RCG26515, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0070761 "pre-snoRNP complex" evidence=IEA] Pfam:PF01798
RGD:1308892 GO:GO:0030515 GO:GO:0070761 EMBL:CH473949 GO:GO:0005732
CTD:10528 eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564
OrthoDB:EOG41G342 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075068 EMBL:BC099149 IPI:IPI00357923
RefSeq:NP_001020903.1 UniGene:Rn.145204 STRING:Q4KLK7
Ensembl:ENSRNOT00000009564 GeneID:362214 KEGG:rno:362214
HOVERGEN:HBG007270 InParanoid:Q4KLK7 NextBio:679052
Genevestigator:Q4KLK7 Uniprot:Q4KLK7
Length = 588
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 185/410 (45%), Positives = 264/410 (64%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQE-FNSAESARQIVKLKAFSKFENTSEALKAAT 61
VLFE G+AL + + ++S + +E + +V+L AF F ++ AL+ A
Sbjct: 6 VLFEHAVGYALLALKEVEEISLLLPQVEECVLNLGKFHNVVRLVAFCPFSSSQVALENAN 65
Query: 62 CLLESKPSKDLRKFLRTHCDGET----LAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
+ E +DLR L T+ + L V D K+G AI+++L C + E++RGV
Sbjct: 66 AVSEGVVHEDLRLLLETYLPSKKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGV 125
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
R L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LDK++NT+
Sbjct: 126 RLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTF 185
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEVEAQ-LK 233
+MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ EI + +A+ +
Sbjct: 186 SMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEEITMDGAKAKAIL 245
Query: 234 EAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVG 293
+A+ SMG ++S +DL+NI+ +V+SL+EYR L++YL+S+M+ VAP+L+AL+GE VG
Sbjct: 246 DASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHNYLRSKMSQVAPSLSALIGEAVG 305
Query: 294 ARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHK 353
ARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+AA K+K
Sbjct: 306 ARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNK 365
Query: 354 GKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 403
G+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>UNIPROTKB|Q3SZ63 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] Pfam:PF01798 GO:GO:0005737 GO:GO:0005730
GO:GO:0042254 EMBL:BC103114 IPI:IPI00712128 RefSeq:NP_001028794.1
UniGene:Bt.49005 ProteinModelPortal:Q3SZ63 STRING:Q3SZ63
PRIDE:Q3SZ63 GeneID:404165 KEGG:bta:404165 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 InParanoid:Q3SZ63 KO:K14564 OrthoDB:EOG41G342
NextBio:20817597 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 Uniprot:Q3SZ63
Length = 596
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 185/410 (45%), Positives = 262/410 (63%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQE-FNSAESARQIVKLKAFSKFENTSEALKAAT 61
VLFE G+AL + + ++ + +E + IV+L AF F ++ AL+ A
Sbjct: 6 VLFEHAVGYALLALKEVEEIILLLPQVEECVLNLGKFHNIVRLVAFCPFSSSQVALENAN 65
Query: 62 CLLESKPSKDLRKFLRTHCDGET----LAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
+ E +DLR L TH + L V D K+G AI+++L C + E++RGV
Sbjct: 66 AVSEGVVHEDLRLLLETHLPPKKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGV 125
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
R L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LDK++NT+
Sbjct: 126 RLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTF 185
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEVEAQ-LK 233
+MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ E+ + +A+ +
Sbjct: 186 SMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEEKLEKLEELTMDAAKAKAIL 245
Query: 234 EAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVG 293
+A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL+GE VG
Sbjct: 246 DASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVG 305
Query: 294 ARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHK 353
ARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+AA K+K
Sbjct: 306 ARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNK 365
Query: 354 GKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 403
G+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>FB|FBgn0038964 [details] [associations]
symbol:Nop56 "Nop56" species:7227 "Drosophila melanogaster"
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS;NAS] [GO:0022008
"neurogenesis" evidence=IMP] Pfam:PF01798 GO:GO:0022008
eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
EMBL:BT001613 ProteinModelPortal:Q8IGT5 SMR:Q8IGT5 STRING:Q8IGT5
PaxDb:Q8IGT5 PRIDE:Q8IGT5 FlyBase:FBgn0038964 InParanoid:Q8IGT5
OrthoDB:EOG4V6WZ4 ArrayExpress:Q8IGT5 Bgee:Q8IGT5 Uniprot:Q8IGT5
Length = 496
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 183/413 (44%), Positives = 262/413 (63%)
Query: 1 MLVLFETPAGFALFKVLDEGKLSK-VEGLWQEFNSAESARQIVKLKAFSKFENTSEALKA 59
+ VL+E AGF+LF V + ++S + + IVKL F+ F+ AL+
Sbjct: 4 LYVLYEHAAGFSLFSVKEFEEVSMFLPQVESSVTDLAKFNSIVKLAGFAPFKTAIAALEN 63
Query: 60 ATCLLESKPSKDLRKFL-----RTHCDGETLAVADSKLGNAIKDKLKIECVHNNAVMELM 114
+ E +DL FL + TL +AD+KLG AI + + ++C H V E++
Sbjct: 64 INAISEGIVPQDLLSFLDDFFAKLKKKKCTLGIADAKLGAAITEAIGVQCSHFGVVPEIL 123
Query: 115 RGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKEL 174
RGVR +L+ G + LGL HS SR K+KF+ + D MIIQ+I LLD LDK++
Sbjct: 124 RGVRFHFAKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDV 183
Query: 175 NTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAK--L-DFSEILPEEVEAQ 231
NT++MR+REWY +HFPEL KI+ DN ++AKA K + DR N + L D +I+ + +AQ
Sbjct: 184 NTFSMRIREWYSYHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQ 243
Query: 232 -LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGE 290
+ AA +SMG ++S +DL+NI+ ++V+ L+EYR +L YL ++MN VAPNL +L+G+
Sbjct: 244 AIIGAAKMSMGMDISIVDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGD 303
Query: 291 LVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAP 350
VGARLI+H GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLIYH+S +G+A
Sbjct: 304 QVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGL 363
Query: 351 KHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 403
K+KG+ISR LA+K ++A R D + + G + ++E RL+ E ++ R
Sbjct: 364 KNKGRISRFLANKCSIASRIDCFLEQPTSVFGETLKQQVEDRLKFYESGDVPR 416
>POMBASE|SPBC646.10c [details] [associations]
symbol:SPBC646.10c "U3 snoRNP protein Nop56 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISO]
Pfam:PF01798 PomBase:SPBC646.10c GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0030532 GO:GO:0005732
eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 PIR:T40586 RefSeq:NP_595368.1
ProteinModelPortal:O94514 IntAct:O94514 STRING:O94514
EnsemblFungi:SPBC646.10c.1 GeneID:2541087 KEGG:spo:SPBC646.10c
OMA:QQLHEYI OrthoDB:EOG42FWS6 NextBio:20802200 Uniprot:O94514
Length = 497
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 174/404 (43%), Positives = 260/404 (64%)
Query: 3 VLFETPAGFALFKVLDEGKLS-KVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAAT 61
+L+E+ G++LF V+ +++ K + + ++V+L++F F+N + AL+ A
Sbjct: 5 LLYESATGYSLFDVVGADQIAAKTKEVQLSLQDISKFGKVVQLRSFIPFKNAAHALENAN 64
Query: 62 CLLESKPSKDLRKFLRTHCDGET------LAVADSKLGNAIKDKLK-IECVHNNAVMELM 114
+ E + L+ FL + + L V D L +IK ++ IEC + +L+
Sbjct: 65 DISEGVLNDFLKNFLELNLPKASKKKKVSLGVQDKNLATSIKSEIDAIECDTSELTQDLL 124
Query: 115 RGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKEL 174
RG+R +L+ L+ D + LGL HS SR K+KF+ ++ D MIIQAI +LD LDK++
Sbjct: 125 RGIRFHGDKLLKQLSPGDFERAQLGLGHSYSRAKVKFNVNRNDNMIIQAIAILDQLDKDI 184
Query: 175 NTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKL-DFSEILPEEVE-A 230
NT+AMR++EWY WHFPEL+KI+ DN YA V L+GD++ N L D + ++ ++ + A
Sbjct: 185 NTFAMRMKEWYSWHFPELSKIVGDNYKYAVIVTLVGDKTTINDEMLHDLAAVVDDDKDIA 244
Query: 231 Q-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVG 289
Q + A +SMG ++S++DL NI ++V+ L+ YR QL++YL +MN VAPNL L+G
Sbjct: 245 QSIINAGKVSMGQDISEIDLENILSFAERVIKLSNYRKQLHNYLVQKMNVVAPNLAELIG 304
Query: 290 ELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAA 349
E+VGARLI+H GSL NL+K P STVQILGAEKALFRALKT+ TPKYG+IYH+S +G+A
Sbjct: 305 EMVGARLISHAGSLTNLSKCPASTVQILGAEKALFRALKTRGNTPKYGIIYHSSFIGKAG 364
Query: 350 PKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL 393
K+KG+ISR LA+K ++A R D D + G R ++E RL
Sbjct: 365 AKNKGRISRFLANKCSIASRIDNFSDAPTTAFGQVLRRQVEERL 408
>CGD|CAL0000142 [details] [associations]
symbol:SIK1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0031428 "box C/D snoRNP complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] CGD:CAL0000142
Pfam:PF01798 EMBL:AACQ01000032 GO:GO:0032040 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 RefSeq:XP_719331.1 ProteinModelPortal:Q5ACS3
STRING:Q5ACS3 GeneID:3638925 KEGG:cal:CaO19.7569 Uniprot:Q5ACS3
Length = 516
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 177/406 (43%), Positives = 258/406 (63%)
Query: 3 VLFETPAGFALFKVL--DEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
+LFE G+ +FKVL + S+ + + + N ++V+L +F+ F+ ++AL+ A
Sbjct: 7 LLFEEATGYGIFKVLIQQDDIASRSKEVQEAANDLSKFSKMVELVSFAPFKGAAQALENA 66
Query: 61 TCLLESKPSKDLRKFLRTHCDGET------LAVADSKLGNAIKDKL-KIECVHNNAVMEL 113
+ E S L+ L + + L V+D LG +IK+ ++ + N V +
Sbjct: 67 NDISEGLVSPYLQSILELNLPKTSSKKRIALGVSDKNLGPSIKEVFPNVDVLSNEIVQDF 126
Query: 114 MRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKE 173
+RG+R +L L D++ LGL H+ SR K+KFS K D IIQAI LLD LDK+
Sbjct: 127 LRGIRVHGAKLFKDLQEGDIERAQLGLGHAFSRAKVKFSVQKNDNHIIQAIALLDQLDKD 186
Query: 174 LNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA--KL-DFSEILPEE--V 228
+NT+AMRV+EWYGWHFPELAKI+ DN YAK + D+++ L D + IL ++ +
Sbjct: 187 INTFAMRVKEWYGWHFPELAKIVPDNYSYAKLALSIKDKASLTDDSLHDVAAILNDDSGL 246
Query: 229 EAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALV 288
++ + A ISMG ++S+ D+ N+ +V++L EYR QLY YL +M+TVAPNL+ L+
Sbjct: 247 AQRVIDNAKISMGQDISEQDMDNVITFAQRVVNLYEYRQQLYKYLTDKMHTVAPNLSTLI 306
Query: 289 GELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQA 348
GE+VGARLI+H GSL NL+KQ STVQILGAEKALFRALKTK TPKYGLIYH+S +G+A
Sbjct: 307 GEVVGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSSFIGKA 366
Query: 349 APKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLR 394
+ K+KG+ISR LA+K ++A R D + + G + ++E RL+
Sbjct: 367 SAKNKGRISRYLANKCSIASRIDNYSEEPTTAFGEILKKQVEDRLK 412
>UNIPROTKB|Q5ACS3 [details] [associations]
symbol:SIK1 "Putative uncharacterized protein SIK1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] CGD:CAL0000142 Pfam:PF01798
EMBL:AACQ01000032 GO:GO:0032040 eggNOG:COG1498 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 RefSeq:XP_719331.1
ProteinModelPortal:Q5ACS3 STRING:Q5ACS3 GeneID:3638925
KEGG:cal:CaO19.7569 Uniprot:Q5ACS3
Length = 516
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 177/406 (43%), Positives = 258/406 (63%)
Query: 3 VLFETPAGFALFKVL--DEGKLSKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
+LFE G+ +FKVL + S+ + + + N ++V+L +F+ F+ ++AL+ A
Sbjct: 7 LLFEEATGYGIFKVLIQQDDIASRSKEVQEAANDLSKFSKMVELVSFAPFKGAAQALENA 66
Query: 61 TCLLESKPSKDLRKFLRTHCDGET------LAVADSKLGNAIKDKL-KIECVHNNAVMEL 113
+ E S L+ L + + L V+D LG +IK+ ++ + N V +
Sbjct: 67 NDISEGLVSPYLQSILELNLPKTSSKKRIALGVSDKNLGPSIKEVFPNVDVLSNEIVQDF 126
Query: 114 MRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKE 173
+RG+R +L L D++ LGL H+ SR K+KFS K D IIQAI LLD LDK+
Sbjct: 127 LRGIRVHGAKLFKDLQEGDIERAQLGLGHAFSRAKVKFSVQKNDNHIIQAIALLDQLDKD 186
Query: 174 LNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA--KL-DFSEILPEE--V 228
+NT+AMRV+EWYGWHFPELAKI+ DN YAK + D+++ L D + IL ++ +
Sbjct: 187 INTFAMRVKEWYGWHFPELAKIVPDNYSYAKLALSIKDKASLTDDSLHDVAAILNDDSGL 246
Query: 229 EAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALV 288
++ + A ISMG ++S+ D+ N+ +V++L EYR QLY YL +M+TVAPNL+ L+
Sbjct: 247 AQRVIDNAKISMGQDISEQDMDNVITFAQRVVNLYEYRQQLYKYLTDKMHTVAPNLSTLI 306
Query: 289 GELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQA 348
GE+VGARLI+H GSL NL+KQ STVQILGAEKALFRALKTK TPKYGLIYH+S +G+A
Sbjct: 307 GEVVGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSSFIGKA 366
Query: 349 APKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLR 394
+ K+KG+ISR LA+K ++A R D + + G + ++E RL+
Sbjct: 367 SAKNKGRISRYLANKCSIASRIDNYSEEPTTAFGEILKKQVEDRLK 412
>RGD|1308892 [details] [associations]
symbol:Nop56 "NOP56 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0070761 "pre-snoRNP complex" evidence=ISO] Pfam:PF01798
RGD:1308892 GO:GO:0030515 GO:GO:0070761 GO:GO:0005732
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
IPI:IPI00357923 UniGene:Rn.145204 HOVERGEN:HBG007270 EMBL:BC086568
ProteinModelPortal:Q5RJN5 STRING:Q5RJN5 UCSC:RGD:1308892
InParanoid:Q5RJN5 ArrayExpress:Q5RJN5 Genevestigator:Q5RJN5
Uniprot:Q5RJN5
Length = 499
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 162/323 (50%), Positives = 224/323 (69%)
Query: 85 LAVADSKLGNAIKDKLKIECVHNNAVMELMRGVRSQLTELISGLAGQDLQPMSLGLSHSL 144
L V D K+G AI+++L C + E++RGVR L+ GL LGL HS
Sbjct: 4 LGVGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSY 63
Query: 145 SRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAK 204
SR K+KF+ ++VD MIIQ+I LLD LDK++NT++MRVREWYG+HFPEL KII DN Y +
Sbjct: 64 SRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCR 123
Query: 205 AVKLMGDRS--NAAKLD-FSEILPEEVEAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVL 260
+ +G+R N KL+ EI + +A+ + +A+ SMG ++S +DL+NI+ +V+
Sbjct: 124 LAQFIGNRRELNEEKLEKLEEITMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVV 183
Query: 261 SLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAE 320
SL+EYR L++YL+S+M+ VAP+L+AL+GE VGARLIAH GSL NLAK P STVQILGAE
Sbjct: 184 SLSEYRQSLHNYLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAE 243
Query: 321 KALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNS 380
KALFRALKT+ TPKYGLI+H++ +G+AA K+KG+ISR LA+K ++A R D + +
Sbjct: 244 KALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSV 303
Query: 381 MGLENRAKLEARLRNLEGKELGR 403
G + R ++E RL E E+ R
Sbjct: 304 FGEKLREQVEERLSFYETGEIPR 326
>WB|WBGene00010627 [details] [associations]
symbol:K07C5.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] Pfam:PF01798 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040018 GO:GO:0040035 EMBL:Z71181
eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 GeneTree:ENSGT00550000075068
OMA:QQLHEYI PIR:T23405 RefSeq:NP_505660.1 ProteinModelPortal:Q21276
SMR:Q21276 STRING:Q21276 PaxDb:Q21276 EnsemblMetazoa:K07C5.4.1
EnsemblMetazoa:K07C5.4.2 GeneID:179442 KEGG:cel:CELE_K07C5.4
UCSC:K07C5.4 CTD:179442 WormBase:K07C5.4 InParanoid:Q21276
NextBio:905416 Uniprot:Q21276
Length = 486
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 191/480 (39%), Positives = 274/480 (57%)
Query: 3 VLFETPAGFALFKV--LDEGKLSKVEGLWQEFNSAESA----RQIVKLKAFSKFENTSEA 56
VL+E AG+AL K+ D+ L + QE ++A + QIV+L +F F+NT A
Sbjct: 8 VLYEHAAGYALMKIKEFDDAGL-----ILQEVDAAHADGYKFSQIVELASFDPFKNTEAA 62
Query: 57 LKAATCLLESKPSKDLRKFLRTHCDGE----TLAVADSKLGNAIKDKLK-IECVHNNAVM 111
L+ + E DL FL+ + L + DSKL ++ + ++ V +
Sbjct: 63 LENCNSISEGLAHPDLTNFLQKSLPKKKKHVVLGINDSKLAGSLTEAFPDLKLVFGGVIT 122
Query: 112 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 171
E++RG R L L L L L HS SR K+KF +VD M+IQ+I LLD LD
Sbjct: 123 EILRGTRVHFERLAKNLPHHSLSKAQLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLD 182
Query: 172 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLD-----FSEILPE 226
K++N + MR+REWY +H+PEL ++ D Y++ + DR+ A+ + EIL
Sbjct: 183 KDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAENENLENEILEILDN 242
Query: 227 EVE--AQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNL 284
+ E AQ+ EAA SMG ++SDLDL NIK +V SL EYR QL++Y+K RM+ AP+L
Sbjct: 243 DSEKTAQIIEAARTSMGMDISDLDLENIKRFAARVSSLMEYRQQLHEYIKDRMDHCAPSL 302
Query: 285 TALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASL 344
+AL+GE VGARLI+H GSL NLAK P STVQILGAEKALFRALKT+ TPKYGL++H+S
Sbjct: 303 SALIGEQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLLFHSSF 362
Query: 345 VGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRA 404
+G+A K+KG++SR LA+K ++A R D + ++ G R ++E RL + +
Sbjct: 363 IGKAGTKNKGRVSRYLANKCSIAARVDCFSETPVSTYGEFLRQQVEDRLEYFTSGTVPKK 422
Query: 405 AGSAKGKPK---IEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEE 461
+ + +EV +K KK A A K A +S+ E A +D KP ++
Sbjct: 423 NIDVMKEAEEAAVEVKEKVIKKKKKA---AKKAKRLAEESVTATAE-AEVDEDAPKPKKK 478
>ASPGD|ASPL0000040023 [details] [associations]
symbol:AN10352 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=IEA]
Pfam:PF01798 EMBL:BN001306 GO:GO:0030686 GO:GO:0006364
GO:GO:0032040 GO:GO:0031428 HOGENOM:HOG000196309 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN EnsemblFungi:CADANIAT00010009
Uniprot:C8VIQ3
Length = 510
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 166/369 (44%), Positives = 231/369 (62%)
Query: 40 QIVKLKAFSKFENTSEALKAATCLLESKPSKDLRKFLRTHCDGET------LAVADSKLG 93
++V+L +F FEN +AL + E S+ L FL + + L +AD L
Sbjct: 44 KMVQLASFLPFENNKQALSEINDISEGVASETLISFLEMNLPKPSKKKNIVLGLADRNLA 103
Query: 94 NAIKDKLK-IECVHNNA---VMELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKL 149
+IK ++C + V +++RGVR ++L+ L D+ LGL H+ SR K+
Sbjct: 104 TSIKSAFSFVDCETGDTSEVVQDMLRGVRLHASKLLKQLREGDMDTAQLGLGHAYSRAKV 163
Query: 150 KFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLM 209
KFS + D IIQAI +LD LDK +NT++MRVREWY WHFPEL KI+ DN YA+ +
Sbjct: 164 KFSVQRDDNHIIQAIAILDQLDKAINTFSMRVREWYSWHFPELIKIVSDNQRYAQLALFI 223
Query: 210 GDRSNAAKLDFSEI--LPEEVE--AQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAE 264
D+ + +I L E+ E AQ + +AA SMG ++S+ D+ N+ +V+SL++
Sbjct: 224 KDKKTLTDENLHDIAALVEDDEGVAQSIIDAAKRSMGQDISESDMENVISFAQRVVSLSK 283
Query: 265 YRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALF 324
YR L+ YL S+MN VAPNL AL+G++VGARLI+H GSL NL+K P STVQILGAEKALF
Sbjct: 284 YRKSLHSYLVSKMNVVAPNLAALIGDIVGARLISHAGSLTNLSKYPASTVQILGAEKALF 343
Query: 325 RALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLE 384
RALKTK TPKYGL+YH+S +G+A PK+KG+ISR LA+K ++A R D D G
Sbjct: 344 RALKTKGNTPKYGLLYHSSFIGRAGPKNKGRISRFLANKCSIASRIDNFSDTPTTKYGDA 403
Query: 385 NRAKLEARL 393
+ ++E RL
Sbjct: 404 LKKQVEERL 412
Score = 363 (132.8 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 102/321 (31%), Positives = 160/321 (49%)
Query: 3 VLFETPAGFALFKVLDEGKL--SKVEGLWQEFNSAESARQIVKLKAFSKFENTSEALKAA 60
+LFE P G++LFKV +G ++ + + N ++V+L +F FEN +AL
Sbjct: 5 LLFEGPMGYSLFKVAHKGDAVGHNLKEVQEGVNDLAKFGKMVQLASFLPFENNKQALSEI 64
Query: 61 TCLLESKPSKDLRKFLRTHCDGET------LAVADSKLGNAIKDKLK-IECVHNNA---V 110
+ E S+ L FL + + L +AD L +IK ++C + V
Sbjct: 65 NDISEGVASETLISFLEMNLPKPSKKKNIVLGLADRNLATSIKSAFSFVDCETGDTSEVV 124
Query: 111 MELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDL 170
+++RGVR ++L+ L D+ LGL H+ SR K+KFS + D IIQAI +LD L
Sbjct: 125 QDMLRGVRLHASKLLKQLREGDMDTAQLGLGHAYSRAKVKFSVQRDDNHIIQAIAILDQL 184
Query: 171 DKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEI--LPEEV 228
DK +NT++MRVREWY WHFPEL KI+ DN YA+ + D+ + +I L E+
Sbjct: 185 DKAINTFSMRVREWYSWHFPELIKIVSDNQRYAQLALFIKDKKTLTDENLHDIAALVEDD 244
Query: 229 EAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALV 288
E + ++I D+ ++ + V+S A+ L Y KS + + + +
Sbjct: 245 EGVAQ--SIIDAAKRSMGQDISE-SDM-ENVISFAQRVVSLSKYRKSLHSYLVSKMNVVA 300
Query: 289 GELVGARLIAH--GGSLLNLA 307
L A LI G L++ A
Sbjct: 301 PNL--AALIGDIVGARLISHA 319
Score = 59 (25.8 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 23/78 (29%), Positives = 33/78 (42%)
Query: 349 APKHKGKISRSLASKTALAIRYDALGDGQDNSM---GLENRAKLEARLRNLEGKELGRAA 405
AP K +++ A LA D GD D M +E + K E + E K+ G
Sbjct: 419 APPTKNEVAMKNAMDAVLA-SMDVDGDDSDAEMKDANVEKKDKKEKKKEKKEKKDKGEKE 477
Query: 406 GSAKGKPKIEVYDKDRKK 423
K K K E + ++KK
Sbjct: 478 EKKK-KRKSEGGESEKKK 494
>DICTYBASE|DDB_G0285679 [details] [associations]
symbol:nol5a "NOP5 family protein" species:44689
"Dictyostelium discoideum" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0285679 Pfam:PF01798 GO:GO:0005730
GenomeReviews:CM000153_GR EMBL:AAFI02000079 GO:GO:0006364
GO:GO:0005732 eggNOG:COG1498 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 RefSeq:XP_638211.1
ProteinModelPortal:Q54MT2 STRING:Q54MT2 PRIDE:Q54MT2
EnsemblProtists:DDB0237576 GeneID:8625259 KEGG:ddi:DDB_G0285679
OMA:DSMVNDT ProtClustDB:CLSZ2430191 Uniprot:Q54MT2
Length = 540
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 164/402 (40%), Positives = 248/402 (61%)
Query: 3 VLFETPAGFALFKVLDEGKLSK----VEGLWQEFNSAESARQIVKLKAFSKFENTSEALK 58
+LFET GF +F++ +++ V+ Q+F+ ++V F+ EN E +
Sbjct: 5 ILFETATGFNIFQLSGMESIAEFTDQVQKSMQDFSKFSKVCKMVGSLPFTSAENALENIN 64
Query: 59 AATCLLESKPSKD-LRKFLRTHCDGETLAVADSKLGNAIKDKLKIECVHNNAVMELMRGV 117
+ + + ++ D L++ +G L V D+KL +I D+LKI C+ N+ E++R +
Sbjct: 65 SISEGILTESLHDFLKQTFSKKTEGVVLGVCDNKLSASIGDELKISCLSNSHTSEIIRCI 124
Query: 118 RSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTY 177
R+ ++E L DL LGL HS SR K+KF+ KVD MIIQ+I LL+ LDK+LNT+
Sbjct: 125 RNHISEFTK-LKSADLLKAQLGLGHSYSRSKVKFNVHKVDNMIIQSICLLEQLDKDLNTF 183
Query: 178 AMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEI--LPEEVEAQLKE- 234
MR+REWY WHFPEL KII+ + +AK KL+ ++ N + EI + E+ E+ K+
Sbjct: 184 FMRLREWYSWHFPELLKIIESQVHFAKLAKLIQNKKNLTEESLDEIKEILEDNESLAKDV 243
Query: 235 --AAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELV 292
AA SMG ++S +DL+ + D+V+SL EYR L YL +M +APNL+ALVG+ +
Sbjct: 244 LSAAKASMGGDISQIDLVTVMHFADRVISLDEYRTNLTQYLAKKMQDIAPNLSALVGDRI 303
Query: 293 GARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKH 352
GA+LI+ GSL +LAK P STVQILGAEKALFRA+K + TPKYG+I++AS V K+
Sbjct: 304 GAKLISRAGSLTSLAKYPASTVQILGAEKALFRAMKVRGKTPKYGIIFNASAVSSET-KN 362
Query: 353 KGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLR 394
KG+I+R L++K ++A R D D G+ + ++ R++
Sbjct: 363 KGRIARCLSNKISIATRIDCFSDNPTAKFGVALKQQVADRIK 404
>UNIPROTKB|G4N2E5 [details] [associations]
symbol:MGG_07915 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0000154 "rRNA modification"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISS] [GO:0031428 "box
C/D snoRNP complex" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] Pfam:PF01798 EMBL:CM001233 GO:GO:0030686
GO:GO:0032040 GO:GO:0030490 GO:GO:0000154 GO:GO:0031428 KO:K14564
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 RefSeq:XP_003713157.1
ProteinModelPortal:G4N2E5 EnsemblFungi:MGG_07915T0 GeneID:2683842
KEGG:mgr:MGG_07915 Uniprot:G4N2E5
Length = 514
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 147/318 (46%), Positives = 201/318 (63%)
Query: 85 LAVADSKLGNAIKDKLK-IECVH---NNAVMELMRGVRSQLTELISGLAGQDLQPMSLGL 140
L V+D KL I +EC + V +L+RG+R+ +L+ L D+ SLGL
Sbjct: 98 LGVSDKKLAGEISSLFPGVECETMDTSEVVADLLRGIRTHAEKLLKSLHEGDILRGSLGL 157
Query: 141 SHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNI 200
H+ SR K+KF+ + D IIQ I LD LDK +N MRVREWYGWHFPEL KI+ DN+
Sbjct: 158 GHAYSRNKVKFNVHRNDNHIIQQIATLDALDKGINAGCMRVREWYGWHFPELIKIVSDNV 217
Query: 201 LYAKAVKLMGDRSNA--AKL-DFSEILPEEVE-AQ-LKEAAMISMGTEVSDLDLLNIKEL 255
YA+ V L+G++ +KL D + +L E+ + AQ + +AA +SMG ++S+ D+ +K
Sbjct: 218 TYARLVLLIGNKKELDDSKLHDIAAVLDEDGDKAQAIIDAAKVSMGQDISEPDVEMVKSF 277
Query: 256 CDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQ 315
V +A YR L + L S+M VAPNL ++G V ARLI+H GSL NL+K P ST+Q
Sbjct: 278 ATSVSKMAAYRKVLAESLDSKMGIVAPNLQCILGTPVAARLISHAGSLTNLSKYPASTLQ 337
Query: 316 ILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGD 375
ILGAEKALFRALKTK TPKYGLIY +S + +A+ + KG+ISR LA+K ++A R D +
Sbjct: 338 ILGAEKALFRALKTKGNTPKYGLIYQSSFISRASARQKGRISRFLANKCSIASRIDNFSE 397
Query: 376 GQDNSMGLENRAKLEARL 393
+ G R +LE RL
Sbjct: 398 QPSSRFGEALRQQLEDRL 415
Score = 328 (120.5 bits), Expect = 8.5e-28, P = 8.5e-28
Identities = 87/241 (36%), Positives = 131/241 (54%)
Query: 3 VLFETPAGFALFKVLDEGKLSKVEGLWQEFNSAESAR--QIVKLKAFSKFENTSEALKAA 60
+L ETPAG+A+F+V+ + + + + A+ AR ++VKL +S + E L+
Sbjct: 7 LLHETPAGYAIFEVVHQADSVGLRLKEVQDSMADLARFGKMVKLVNWSPWPEFHEGLENM 66
Query: 61 TCLLESKPSKDLRKFL-----RTHCDGE--TLAVADSKLGNAIKDKLK-IECVH---NNA 109
+ E + L+ L +T L V+D KL I +EC +
Sbjct: 67 NEISEGLVTDFLKNALELALPKTSAKKSKVVLGVSDKKLAGEISSLFPGVECETMDTSEV 126
Query: 110 VMELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDD 169
V +L+RG+R+ +L+ L D+ SLGL H+ SR K+KF+ + D IIQ I LD
Sbjct: 127 VADLLRGIRTHAEKLLKSLHEGDILRGSLGLGHAYSRNKVKFNVHRNDNHIIQQIATLDA 186
Query: 170 LDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNA--AKL-DFSEILPE 226
LDK +N MRVREWYGWHFPEL KI+ DN+ YA+ V L+G++ +KL D + +L E
Sbjct: 187 LDKGINAGCMRVREWYGWHFPELIKIVSDNVTYARLVLLIGNKKELDDSKLHDIAAVLDE 246
Query: 227 E 227
+
Sbjct: 247 D 247
>UNIPROTKB|H9L0K4 [details] [associations]
symbol:H9L0K4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0070761 "pre-snoRNP complex" evidence=IEA] Pfam:PF01798
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075068 EMBL:AADN02044049 EMBL:AADN02044050
EMBL:AADN02044051 Ensembl:ENSGALT00000023411 Uniprot:H9L0K4
Length = 486
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 175/440 (39%), Positives = 239/440 (54%)
Query: 41 IVKLKAFSKFENTSEALKAATCLLESKPSKDLRKFLRTHCDGET----LAVADSKLGNAI 96
+VKL AFS F++ AL+ + E +DLR L T + L V D+K+G AI
Sbjct: 18 VVKLVAFSPFKSAQSALENMNAVSEGILHEDLRLLLETSMPAKKKKALLGVGDAKIGAAI 77
Query: 97 KDKLKIECVHNNAVMELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKV 156
++L +C V E++RG+R L+ GL Q LGL HS SR K+KF+ ++V
Sbjct: 78 LEELGYQCQTGGVVAEILRGIRLHFHALVKGLTAQSASKAQLGLGHSYSRAKVKFNVNRV 137
Query: 157 DTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA 216
D MIIQ+I LLD LDK++NT++MRVREWYG+HFPEL KI+ +N Y + L G
Sbjct: 138 DNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELIKIVSEN--YTEE-SLEG------ 188
Query: 217 KLDFSEILPEEVEAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKS 275
EI+ + +AQ + EA+ SMG ++S +DL+NI+ +V+SL+EYR L +YL+S
Sbjct: 189 ---LEEIVMDGAKAQAILEASRSSMGMDISPIDLINIESFSSRVISLSEYRKGLQEYLRS 245
Query: 276 RMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPK 335
+M+ VAP+L+AL+GE+VGARLI+H GSL NLAK P STVQILGAEKALFR A P
Sbjct: 246 KMSQVAPSLSALIGEVVGARLISHAGSLTNLAKYPASTVQILGAEKALFRYRCGVVALPA 305
Query: 336 YGLIYHASLVGQAAPKHKGKISRSL-----ASKTALAIRYDALGDGQDNSMGLENRAKLE 390
L H +A + G L A L L D S+G + +
Sbjct: 306 PALSDHCGSAARAGCQRDGSGRHLLGCAGVAEGQQLPCGAQRLRASPDGSLGFSQGFE-D 364
Query: 391 ARLRNLEGKELGRAAGS--AKGKPKIEVYDKDRKKGPGAMITA-AKTYNPAADSILGLME 447
AR KE A A+ K K E +K RKK + A A +S+ E
Sbjct: 365 AREHPQVMKEAMVEANEVVAEVKRKQEKKEKKRKKREKRRLEALAAAAEEMENSVQEAEE 424
Query: 448 N---AASKDDEEKPMEEVAA 464
N K ++K E+ AA
Sbjct: 425 NNIEPKKKKKKKKEQEQEAA 444
>UNIPROTKB|Q58105 [details] [associations]
symbol:MJ0694 "Uncharacterized NOP5 family protein MJ0694"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0005515
"protein binding" evidence=IPI] Pfam:PF01798 EMBL:L77117
GenomeReviews:L77117_GR eggNOG:COG1498 KO:K14564 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
PIR:F64386 RefSeq:NP_247678.1 PDB:3T7Z PDBsum:3T7Z
ProteinModelPortal:Q58105 IntAct:Q58105 GeneID:1451561
KEGG:mja:MJ_0694 OMA:KYPNPPK ProtClustDB:PRK14552 Uniprot:Q58105
Length = 414
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 115/284 (40%), Positives = 164/284 (57%)
Query: 141 SHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNI 200
S L++ +K A + D +IIQ + DLDK LN + R+REWY +FPEL ++ +
Sbjct: 107 STELTKKVIKSYAQQKDKIIIQVAEAISDLDKTLNLLSERLREWYSLYFPELDHLVNKHE 166
Query: 201 LYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVL 260
+YA + +G R N K +ILP ++ ++ EAA SMG E+ D DL I + +++
Sbjct: 167 VYANLITKLGKRKNFTKSQLKKILPSKLAGKIAEAAKNSMGGELEDYDLDVIVKFAEEIN 226
Query: 261 SLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAE 320
L E R +LY+YL+ MN APN+T L G +GARLI G L LAK P ST+Q+LGAE
Sbjct: 227 HLYEKRKELYNYLEKLMNEEAPNITKLAGVSLGARLIGLAGGLEKLAKMPASTIQVLGAE 286
Query: 321 KALFRALKTKHATPKYGLIYHASLVGQAAPK-HKGKISRSLASKTALAIRYDALGDGQDN 379
KALF L+ PK+G+IY+ L+ Q +P +GKI+R+LA K A+A R D +GD +
Sbjct: 287 KALFAHLRMGVEPPKHGIIYNHPLI-QGSPHWQRGKIARALACKLAIAARADYVGDYIAD 345
Query: 380 SMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYDKDRKK 423
+ LE KL R+ + K K KPK + +K KK
Sbjct: 346 EL-LE---KLNKRVEEIRRKYPKPPKKKKKEKPKAKKKEKKGKK 385
>UNIPROTKB|Q97ZH3 [details] [associations]
symbol:SSO0939 "Pre mRNA splicing protein" species:273057
"Sulfolobus solfataricus P2" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF01798 EMBL:AE006641 GenomeReviews:AE006641_GR
PDB:3ID5 PDB:3ID6 PDB:3PLA PDBsum:3ID5 PDBsum:3ID6 PDBsum:3PLA
eggNOG:COG1498 KO:K14564 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 ProtClustDB:PRK14552 PIR:H90244
RefSeq:NP_342425.1 PDB:3ICX PDBsum:3ICX ProteinModelPortal:Q97ZH3
DIP:DIP-48938N IntAct:Q97ZH3 GeneID:1455182 KEGG:sso:SSO0939
HOGENOM:HOG000227188 OMA:FLPASTI EvolutionaryTrace:Q97ZH3
Uniprot:Q97ZH3
Length = 412
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 106/261 (40%), Positives = 162/261 (62%)
Query: 140 LSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDN 199
LS +R KL+ +A K D + IQA+ +DD+DK +N ++ R+REWY HFPEL K+I+D+
Sbjct: 120 LSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDH 179
Query: 200 ILYAKAVKLMGDRSNAAKLDFSEI-LPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQ 258
YA V GDR E+ E+ ++ +AA S+G ++S+ DL ++ + +
Sbjct: 180 EEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANT 239
Query: 259 VLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILG 318
+L L R L +YL+ M VAPN+TALVG +GARL++ GSL LAK P ST+Q+LG
Sbjct: 240 ILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLG 299
Query: 319 AEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQD 378
AEKALFRAL++ PK+G+I+ + + +GKI+R+LA+K A+A R DA G+
Sbjct: 300 AEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFS-GR- 357
Query: 379 NSMGLENRAKLEARLRNLEGK 399
+G + +L+ R+ ++ K
Sbjct: 358 -FIGDQLNEQLKKRIDEIKEK 377
>UNIPROTKB|Q6NVP6 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0071339 "MLL1
complex" evidence=ISS] InterPro:IPR027105 Pfam:PF01798
GO:GO:0005681 GO:GO:0003723 GO:GO:0060041 GO:GO:0000398
GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 EMBL:BC067959 RefSeq:NP_998859.1
UniGene:Str.66282 ProteinModelPortal:Q6NVP6 SMR:Q6NVP6
STRING:Q6NVP6 Ensembl:ENSXETT00000023852 GeneID:407890
KEGG:xtr:407890 Xenbase:XB-GENE-489336 InParanoid:Q6NVP6
OMA:ESTEGKX Bgee:Q6NVP6 Uniprot:Q6NVP6
Length = 498
Score = 321 (118.1 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 67/236 (28%), Positives = 125/236 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 91 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKN 150
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G +++D +L I+E CD L L + + ++Y+Y++SR
Sbjct: 151 NENLQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESR 210
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ +VG A+++ G L NL+K P V +LGA++ + P
Sbjct: 211 MSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLSGFSSTSVLPHT 270
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 392
G IYH+ +V P K +R +++K LA R D+ + + +G + + ++E +
Sbjct: 271 GYIYHSDIVQSLPPDLHRKAARLVSAKCTLAARVDSFHESSEGKVGYDLKEEIERK 326
Score = 45 (20.9 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 16 VLDEGKLSKVEGLWQEFN---SAESARQIVKL---KAFSK 49
++DE L +E + +E +AES + I KL K FS+
Sbjct: 22 LIDEDDLETIEEVQEEMQVDLNAESVKSIAKLSDSKLFSE 61
>ZFIN|ZDB-GENE-040426-1561 [details] [associations]
symbol:prpf31 "PRP31 pre-mRNA processing factor 31
homolog (yeast)" species:7955 "Danio rerio" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;IMP] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] [GO:0071339 "MLL1
complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
ZFIN:ZDB-GENE-040426-1561 GO:GO:0005681 GO:GO:0003723 GO:GO:0060041
GO:GO:0000398 GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
EMBL:BC055531 IPI:IPI00508030 RefSeq:NP_956798.1 UniGene:Dr.76439
ProteinModelPortal:Q7SXM7 SMR:Q7SXM7 STRING:Q7SXM7 PRIDE:Q7SXM7
Ensembl:ENSDART00000137029 GeneID:393476 KEGG:dre:393476 CTD:26121
GeneTree:ENSGT00550000075069 HOGENOM:HOG000202033
HOVERGEN:HBG082193 InParanoid:Q7SXM7 KO:K12844 OMA:VESDPEY
OrthoDB:EOG4W6NW1 NextBio:20814506 ArrayExpress:Q7SXM7 Bgee:Q7SXM7
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 Uniprot:Q7SXM7
Length = 508
Score = 325 (119.5 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 71/242 (29%), Positives = 125/242 (51%)
Query: 153 ADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDR 212
AD +I+ A L ++D ELN VR+ Y FPEL ++ + + Y + VK +G+
Sbjct: 97 ADPEYRLIVAANNLTVEIDNELNIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNN 156
Query: 213 SNAAKLD--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLY 270
K + +IL + A + GT + D +L ++E CD L L + + ++Y
Sbjct: 157 LEKCKNNETLQQILTNATIMVVSVTASTTQGTMLGDDELQRLEEACDMALELNQSKHRIY 216
Query: 271 DYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTK 330
+Y++SRM+ +APNL+ +VG A+++ G L NL+K P + +LGA++ +
Sbjct: 217 EYVESRMSFIAPNLSIIVGASTAAKIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSST 276
Query: 331 HATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLE 390
P G IYH +V P + K +R +++K LA R D+ + D +G + + ++E
Sbjct: 277 SLLPHTGYIYHCDVVQTLPPDLRRKAARLVSAKCTLASRVDSFHESADGKVGYDLKEEIE 336
Query: 391 AR 392
+
Sbjct: 337 RK 338
Score = 37 (18.1 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 19 EGKLSKV-EGLWQEFNSAESARQIVKLKAFSKF 50
+G L + E + +++S ES I KL+ F
Sbjct: 39 DGGLEDIPEEMEVDYSSTESVTSIAKLRHSKPF 71
>UNIPROTKB|E7ESA8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 IPI:IPI00738596
HGNC:HGNC:15446 ProteinModelPortal:E7ESA8 SMR:E7ESA8 PRIDE:E7ESA8
Ensembl:ENST00000419967 UCSC:uc010yek.1 ArrayExpress:E7ESA8
Bgee:E7ESA8 Uniprot:E7ESA8
Length = 450
Score = 319 (117.4 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 66/236 (27%), Positives = 125/236 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 392
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>UNIPROTKB|Q5U5C5 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 GO:GO:0071339
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:BC084759
RefSeq:NP_001088437.1 UniGene:Xl.48511 ProteinModelPortal:Q5U5C5
SMR:Q5U5C5 GeneID:495301 KEGG:xla:495301 Xenbase:XB-GENE-865857
Uniprot:Q5U5C5
Length = 498
Score = 316 (116.3 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 69/238 (28%), Positives = 129/238 (54%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 91 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKN 150
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G +++D +L I+E CD L L + + ++Y+Y++SR
Sbjct: 151 NENLQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESR 210
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ +VG A+++ G L NL+K P V +LGA++ + P
Sbjct: 211 MSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLTGFSSTSVLPHT 270
Query: 337 GLIYHASLVGQAAPK--HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 392
G IYH+ +V Q+ P H+ K +R +++K LA R D+ + + +G + + ++E +
Sbjct: 271 GYIYHSEIV-QSLPSDLHR-KAARLVSAKCTLASRVDSFHENPEGKIGYDLKEEIERK 326
Score = 43 (20.2 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 16 VLDEGKLSKVEGLWQEFN---SAESARQIVKL---KAFSK 49
++DE L +E + +E +AES + I KL K FS+
Sbjct: 22 LIDEDDLETIEEVDEEMQVDLNAESVKSIAKLSDSKLFSE 61
>UNIPROTKB|F1RNI3 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:FP476135 RefSeq:XP_003127461.2 Ensembl:ENSSSCT00000003624
GeneID:100520791 KEGG:ssc:100520791 Uniprot:F1RNI3
Length = 499
Score = 323 (118.8 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 67/236 (28%), Positives = 125/236 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++SD +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 392
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>MGI|MGI:1916238 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=ISO;ISA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal body"
evidence=ISA] [GO:0016607 "nuclear speck" evidence=ISA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=ISA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=ISA] [GO:0070990 "snRNP
binding" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR027105 MGI:MGI:1916238 Pfam:PF01798 GO:GO:0016607
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0015030
GO:GO:0043021 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
EMBL:AC130680 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AY040823 EMBL:AK005294
EMBL:AK033190 EMBL:AK033283 EMBL:AK044398 EMBL:AK044457
EMBL:AK051260 EMBL:CT010189 EMBL:BC018376 EMBL:BC057877
EMBL:BC061461 IPI:IPI00331424 IPI:IPI00459791 IPI:IPI00625183
IPI:IPI00742282 IPI:IPI00742413 RefSeq:NP_001153186.1
RefSeq:NP_081604.3 UniGene:Mm.246863 ProteinModelPortal:Q8CCF0
SMR:Q8CCF0 STRING:Q8CCF0 PhosphoSite:Q8CCF0 PaxDb:Q8CCF0
PRIDE:Q8CCF0 DNASU:68988 Ensembl:ENSMUST00000008517
Ensembl:ENSMUST00000108636 Ensembl:ENSMUST00000179769 GeneID:68988
KEGG:mmu:68988 UCSC:uc009evi.2 UCSC:uc012ewf.1 InParanoid:Q8CCF0
NextBio:328355 Bgee:Q8CCF0 Genevestigator:Q8CCF0
GermOnline:ENSMUSG00000008373 Uniprot:Q8CCF0
Length = 499
Score = 323 (118.8 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 67/236 (28%), Positives = 125/236 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++SD +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 392
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>FB|FBgn0036487 [details] [associations]
symbol:Prp31 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0000244 "assembly
of spliceosomal tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR027105 Pfam:PF01798 EMBL:AE014296 GO:GO:0022008
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HSSP:O28191
EMBL:AY051928 RefSeq:NP_648756.1 UniGene:Dm.9673 SMR:Q9VUM1
STRING:Q9VUM1 EnsemblMetazoa:FBtr0075642 GeneID:39655
KEGG:dme:Dmel_CG6876 UCSC:CG6876-RA CTD:39655 FlyBase:FBgn0036487
InParanoid:Q9VUM1 OrthoDB:EOG4JWSVZ GenomeRNAi:39655 NextBio:814716
Uniprot:Q9VUM1
Length = 501
Score = 323 (118.8 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 91/327 (27%), Positives = 157/327 (48%)
Query: 81 DGETLAVADSKLGNAIKDKLKIECVHNNA--VMELMRGVRSQLTELISGLAGQDLQPMSL 138
D E L DS++ +A + L E + A +M++ V+S + EL + L+
Sbjct: 16 DNE-LEEEDSEMASAEDESLLAEKLAKPAPNLMDVDVTVQS-VRELCKLRDSERLKNTLQ 73
Query: 139 GLSHSLSRYKL------KFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPEL 192
+ H SR + +D +I+ A + D+D E++ +E Y FPEL
Sbjct: 74 QIEHYASRQRTAAEMLGSVESDPEYCLIVDANAIAVDIDNEISIVHKFTKEKYQKRFPEL 133
Query: 193 AKIIQDNILYAKAVKLMGDRSNAAKLD--FSEILPEEVEAQLKEAAMISMGTEVSDLDLL 250
+I I Y AVK +G+ + K + IL + + A + GT ++ +
Sbjct: 134 DSLIVGEIEYLLAVKELGNDLDQVKNNEKLQAILTQATIMIVSVTASTTQGTMLTPAEKA 193
Query: 251 NIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQP 310
I E C+ + L +++++Y+Y++SRM +APNL+ +VG A+L+ G L L+K P
Sbjct: 194 KIDEACEMAIELNNFKSKIYEYVESRMTFIAPNLSMIVGASTAAKLLGIAGGLSKLSKMP 253
Query: 311 GSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRY 370
VQ+LGA+K P G +Y++ +V AP + K +R +A+K+ LA R
Sbjct: 254 ACNVQVLGAQKKTLSGFSQTQMLPHTGYVYYSQIVQDTAPDLRRKAARLVAAKSVLAARV 313
Query: 371 DALGDGQDNSMGLENRAKLEARLRNLE 397
DA + +GL + +E +L L+
Sbjct: 314 DACHESVHGEIGLRFKEDVEKKLDKLQ 340
>UNIPROTKB|E1BM48 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
CTD:26121 GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:DAAA02047818 IPI:IPI00691365 RefSeq:NP_001193214.1
UniGene:Bt.5160 Ensembl:ENSBTAT00000010198 GeneID:513577
KEGG:bta:513577 NextBio:20870922 Uniprot:E1BM48
Length = 499
Score = 319 (117.4 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 66/236 (27%), Positives = 125/236 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 392
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>UNIPROTKB|F1PKI0 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0070990 "snRNP binding" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA] [GO:0005687
"U4 snRNP" evidence=IEA] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
GO:GO:0016607 GO:GO:0000244 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005687 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 CTD:26121 GeneTree:ENSGT00550000075069
KO:K12844 OMA:VESDPEY InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AAEX03000741 RefSeq:XP_850917.1
Ensembl:ENSCAFT00000004264 GeneID:476389 KEGG:cfa:476389
Uniprot:F1PKI0
Length = 499
Score = 319 (117.4 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 66/236 (27%), Positives = 125/236 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 392
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>UNIPROTKB|Q8WWY3 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IMP;IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0015030 "Cajal body"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070990 "snRNP binding" evidence=IPI] [GO:0005690
"U4atac snRNP" evidence=TAS] [GO:0005687 "U4 snRNP" evidence=IDA]
[GO:0005684 "U2-type spliceosomal complex" evidence=IC]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0003723 Orphanet:791 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005684 GO:GO:0005687 EMBL:AC012314 PDB:2OZB
PDB:3SIU PDB:3SIV PDBsum:2OZB PDBsum:3SIU PDBsum:3SIV
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193
KO:K12844 OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY040822 EMBL:AF308303
EMBL:AL050369 EMBL:AK098547 EMBL:BC117389 IPI:IPI00167198
IPI:IPI00292000 IPI:IPI00738596 RefSeq:NP_056444.3
UniGene:Hs.515598 ProteinModelPortal:Q8WWY3 SMR:Q8WWY3
IntAct:Q8WWY3 STRING:Q8WWY3 PhosphoSite:Q8WWY3 DMDM:90101442
PaxDb:Q8WWY3 PRIDE:Q8WWY3 DNASU:26121 Ensembl:ENST00000321030
Ensembl:ENST00000571534 Ensembl:ENST00000571610
Ensembl:ENST00000572776 Ensembl:ENST00000574214
Ensembl:ENST00000576100 Ensembl:ENST00000576581
Ensembl:ENST00000576817 Ensembl:ENST00000576989 GeneID:26121
KEGG:hsa:26121 UCSC:uc002qdh.2 GeneCards:GC19P054618
H-InvDB:HIX0027609 H-InvDB:HIX0137464 HGNC:HGNC:15446 HPA:HPA041939
MIM:600138 MIM:606419 neXtProt:NX_Q8WWY3 PharmGKB:PA33814
HOGENOM:HOG000207983 InParanoid:Q8WWY3 PhylomeDB:Q8WWY3
EvolutionaryTrace:Q8WWY3 GenomeRNAi:26121 NextBio:48131
ArrayExpress:Q8WWY3 Bgee:Q8WWY3 CleanEx:HS_PRPF31
Genevestigator:Q8WWY3 GermOnline:ENSG00000105618 GO:GO:0005690
GO:GO:0070990 Uniprot:Q8WWY3
Length = 499
Score = 319 (117.4 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 66/236 (27%), Positives = 125/236 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 392
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>UNIPROTKB|E7EVX8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HGNC:HGNC:15446
IPI:IPI00657721 ProteinModelPortal:E7EVX8 SMR:E7EVX8 PRIDE:E7EVX8
Ensembl:ENST00000391755 ArrayExpress:E7EVX8 Bgee:E7EVX8
Uniprot:E7EVX8
Length = 493
Score = 306 (112.8 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 64/230 (27%), Positives = 120/230 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENR 386
G IYH+ +V P + K +R +A+K LA R D+ + + +E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKDEIERK 321
>POMBASE|SPBC119.13c [details] [associations]
symbol:prp31 "U4/U6 x U5 tri-snRNP complex subunit
Prp31" species:4896 "Schizosaccharomyces pombe" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0007126
"meiosis" evidence=NAS] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] InterPro:IPR027105 PomBase:SPBC119.13c
Pfam:PF01798 GO:GO:0007126 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0046540
GO:GO:0045292 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 PIR:T39311 RefSeq:NP_595294.1
ProteinModelPortal:O42904 IntAct:O42904 STRING:O42904
EnsemblFungi:SPBC119.13c.1 GeneID:2540045 KEGG:spo:SPBC119.13c
OMA:RDHYSIR OrthoDB:EOG4ZCXDV NextBio:20801182 Uniprot:O42904
Length = 518
Score = 304 (112.1 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 70/240 (29%), Positives = 121/240 (50%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVK-LMGDRSNA-A 216
+I+ + + ++D E+ V+EWY FPEL+ ++ + Y K V L+ D N+
Sbjct: 119 LIVDSNSIAMEIDDEILRLHRLVKEWYHDRFPELSSLVLNAFDYCKTVSSLLNDLDNSKT 178
Query: 217 KLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
KL F LP + A ++G + D + N+K C+ + L E + ++ +Y++SR
Sbjct: 179 KLSF---LPSATVMVIATTATTTVGKPLPDEMIKNVKNCCEAIQQLGEEKQKIIEYVQSR 235
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
++ VAPNL+A+VG A LI G L L K P + LG + + + Y
Sbjct: 236 ISVVAPNLSAVVGSTTAANLIGIAGGLTRLGKFPACNLPALGKRRLTTIGINNPAVSGDY 295
Query: 337 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNL 396
G +Y + +V + P + + R A+K ALA R D++ + D S G+ R ++E ++ L
Sbjct: 296 GFLYMSEIVQKTPPDVRKQAIRMTAAKVALAARIDSIHEYPDGSFGISARKEVERKIEKL 355
Score = 37 (18.1 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 408 AKGKPKIEVYDKDRKKGPGAM 428
A GK + EV++ D +G G +
Sbjct: 403 AFGKEEAEVFNFDETEGLGML 423
>UNIPROTKB|E7EN72 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 IPI:IPI00167198 HGNC:HGNC:15446
ProteinModelPortal:E7EN72 SMR:E7EN72 PRIDE:E7EN72
Ensembl:ENST00000445811 ArrayExpress:E7EN72 Bgee:E7EN72
Uniprot:E7EN72
Length = 284
Score = 269 (99.8 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 56/194 (28%), Positives = 104/194 (53%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYHASLVGQAAP 350
G IYH+ +V Q+ P
Sbjct: 272 GYIYHSDIV-QSLP 284
>WB|WBGene00022458 [details] [associations]
symbol:prp-31 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR027105 Pfam:PF01798
GO:GO:0009792 GO:GO:0002009 GO:GO:0016477 GO:GO:0008406
GO:GO:0018996 GO:GO:0042127 EMBL:FO080728 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 GO:GO:0001703 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 RefSeq:NP_491527.1 ProteinModelPortal:Q9N592
SMR:Q9N592 STRING:Q9N592 PaxDb:Q9N592 EnsemblMetazoa:Y110A7A.8
GeneID:172146 KEGG:cel:CELE_Y110A7A.8 UCSC:Y110A7A.8.2 CTD:172146
WormBase:Y110A7A.8 InParanoid:Q9N592 NextBio:874215 Uniprot:Q9N592
Length = 504
Score = 281 (104.0 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 80/277 (28%), Positives = 124/277 (44%)
Query: 153 ADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDR 212
AD +I++ + D+D E+N VR+ Y FPEL ++ + + Y V+L+G+
Sbjct: 95 ADPQYKLIVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLLGNE 154
Query: 213 SNA--AKLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLY 270
N+ K IL + + G ++ +L + + C+ L R +++
Sbjct: 155 INSKVVKEQLGGILDASTCMVVSVTVSTTQGVKLEPNELETVMDACNLAAQLHVNRLEMH 214
Query: 271 DYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTK 330
++ RM +APNL AL+G A L++ G L LA P VQ+LG K T
Sbjct: 215 QLVEWRMALIAPNLVALLGSTTTAHLVSQAGGLSPLATMPSCNVQVLGKTKKNLIGFSTV 274
Query: 331 HATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLE 390
P +G IY LV + P K K ++ LA+K L R DA + + G E A +E
Sbjct: 275 STNPHHGFIYFHQLVQKMPPDLKNKAAKILAAKVTLVARIDAQHESSNGEKGAEFLALVE 334
Query: 391 ARLRN-LEGKELGRAAGSAKGKPKIEVYDKDRKKGPG 426
++ LE + A A KP DK KK G
Sbjct: 335 SKFEKMLEPPPV--KANKALPKP----LDKASKKRGG 365
>UNIPROTKB|E7ESX0 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 HGNC:HGNC:15446 IPI:IPI00657783
ProteinModelPortal:E7ESX0 SMR:E7ESX0 PRIDE:E7ESX0
Ensembl:ENST00000445124 ArrayExpress:E7ESX0 Bgee:E7ESX0
Uniprot:E7ESX0
Length = 276
Score = 259 (96.2 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 53/185 (28%), Positives = 98/185 (52%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 336
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 337 GLIYH 341
G IYH
Sbjct: 272 GYIYH 276
>TAIR|locus:2195698 [details] [associations]
symbol:emb1220 "AT1G60170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] InterPro:IPR027105 Pfam:PF01798
EMBL:CP002684 GO:GO:0003676 GO:GO:0030529 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY080777
EMBL:AY117155 EMBL:AY084782 IPI:IPI00547292 RefSeq:NP_564754.1
UniGene:At.21797 ProteinModelPortal:Q8RXN6 SMR:Q8RXN6 STRING:Q8RXN6
PRIDE:Q8RXN6 EnsemblPlants:AT1G60170.1 GeneID:842312
KEGG:ath:AT1G60170 TAIR:At1g60170 InParanoid:Q8RXN6
PhylomeDB:Q8RXN6 ProtClustDB:CLSN2688931 ArrayExpress:Q8RXN6
Genevestigator:Q8RXN6 Uniprot:Q8RXN6
Length = 485
Score = 277 (102.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 69/266 (25%), Positives = 132/266 (49%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ L D++ E+ +++ Y F EL ++ I YA VK +G+ ++ A +
Sbjct: 95 LIVDCNQLSVDIENEIVIVHNFIKDKYKLKFQELESLVHHPIDYACVVKKIGNETDLALV 154
Query: 219 DFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMN 278
D +++LP + + A+ + G+ + + L + E CD+ L L R ++ ++++S+M
Sbjct: 155 DLADLLPSAIIMVVSVTALTTKGSALPEDVLQKVLEACDRALDLDSARKKVLEFVESKMG 214
Query: 279 TVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGL 338
++APNL+A+VG V A+L+ G L LAK P VQ+LG ++ + + + G
Sbjct: 215 SIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGY 274
Query: 339 IYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEG 398
+ + P + + R +A+K+ LA R DA + + +G+ +A E + +E
Sbjct: 275 LEQTEIYQSTPPGLQARAGRLVAAKSTLAARVDAT---RGDPLGISGKAFREEIRKKIEK 331
Query: 399 KELGRAAGSAKGKPKIEVYDKDRKKG 424
+ A K P + K R+ G
Sbjct: 332 WQEPPPARQPKPLPVPDSEPKKRRGG 357
>DICTYBASE|DDB_G0289595 [details] [associations]
symbol:prpf31 "pre-mRNA processing factor 31"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA;ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IEA;ISS] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] InterPro:IPR027105
dictyBase:DDB_G0289595 Pfam:PF01798 GenomeReviews:CM000154_GR
GO:GO:0000398 GO:GO:0046540 EMBL:AAFI02000146 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OMA:RDHYSIR
RefSeq:XP_002649103.1 EnsemblProtists:DDB0304959 GeneID:8627218
KEGG:ddi:DDB_G0289595 ProtClustDB:CLSZ2735590 Uniprot:C7G068
Length = 460
Score = 267 (99.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 99/384 (25%), Positives = 175/384 (45%)
Query: 89 DSKLGNAIKDKLKIECV--HNNAVMELMRGVRS--QLTELISGLAGQDLQPMSLGLSHSL 144
D L + + +K +IE + H +A +E + + + +LT L++ + Q ++ SL
Sbjct: 6 DLMLSDEMIEKKQIELINKHKDAPIESIAKLNNSNKLTSLLTRVKNQMIK--------SL 57
Query: 145 SRYKLKFSADKVD-TMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYA 203
+K D + +I++ + ++ E+ VRE Y FPEL +Q+ + Y
Sbjct: 58 PEKGVKTGQDSEEHKLIVECNQMAQEIQHEIYLIHKFVRERYSKKFPELESSVQNPLDYI 117
Query: 204 KAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLA 263
VK + + ++ + +++LP+ L + G ++ +L+ + + CD L L
Sbjct: 118 NCVKRIKNENDLINVQLNDLLPKSTIMVLLVTLSSTAGKNLTQEELMRVIDACDMGLELD 177
Query: 264 EYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEK-A 322
++ + YL+SRM +APNL+ L+G + ++LI GS+ LA P +Q LGA+K A
Sbjct: 178 LHKKNILHYLESRMTYIAPNLSVLMGSSIASKLIGIAGSIQQLANIPAGHLQTLGADKKA 237
Query: 323 LFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSM- 381
L + + GLI +V +A P + K R+L + ++A R DA QD+S
Sbjct: 238 LAGFSGMSNRKFQMGLISQCDIVKKAPPFLQVKALRTLTGRVSIAARVDAQ---QDSSFY 294
Query: 382 GLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYDKDRKKGPGAMITAAKTYNPAADS 441
G R + L +E + K P E + ++ G A + K Y D
Sbjct: 295 GETGRQYRDEILAKIEKWQEPPPQKQDKALPAPEEGKRTKRGGKKARLYKQK-YG-VTD- 351
Query: 442 ILGLMENAASKDDEEKPMEEVAAG 465
+N S EEK + E G
Sbjct: 352 -FQKAKNRMSFGVEEKTIGESGIG 374
>UNIPROTKB|E7EU94 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 HGNC:HGNC:15446 IPI:IPI00657750
ProteinModelPortal:E7EU94 SMR:E7EU94 PRIDE:E7EU94
Ensembl:ENST00000447810 ArrayExpress:E7EU94 Bgee:E7EU94
Uniprot:E7EU94
Length = 261
Score = 236 (88.1 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 48/165 (29%), Positives = 92/165 (55%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEK 321
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
>GENEDB_PFALCIPARUM|PFD0450c [details] [associations]
symbol:PFD0450c "pre-mrna splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0005681 EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 KO:K12844 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 HOGENOM:HOG000207983
RefSeq:XP_002808648.1 EnsemblProtists:PFD0450c:mRNA GeneID:812409
KEGG:pfa:PFD0450c EuPathDB:PlasmoDB:PF3D7_0409100
ProtClustDB:CLSZ2433500 Uniprot:C0H4A0
Length = 534
Score = 253 (94.1 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 73/242 (30%), Positives = 119/242 (49%)
Query: 157 DTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA 216
D MI + + + +D E+ V++ Y FPEL I+ + Y V + + +
Sbjct: 152 DVMIEKCMETILKIDTEILNIHKYVKDIYSTKFPELDSIVYSPVEYISVVNKIRNEVDLK 211
Query: 217 KLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+DFS+ILP + A+ ++ G + D L N C++ + L EYR + YL+S+
Sbjct: 212 NIDFSDILPNTTVMAITVASSMTTGICLPDNLLKNCISFCNEGIQLNEYRNIILLYLESK 271
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAK-QPGSTVQILGAEKALFRALKTKHATPK 335
M +APN+T L+G + ARLI+ GSL NL+ + + I +K+LF L H T
Sbjct: 272 MFYLAPNVTMLLGSSLTARLISAVGSLKNLSIISSQNLIVIASTKKSLF-GLSNVHKTLG 330
Query: 336 YGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRN 395
G++ + +V +K K LASK +LA R D ++ GL R + + L
Sbjct: 331 IGILCCSEIVQSVPDAYKKKAISLLASKCSLAARIDYFKKYKEGQYGLLLRQYIISHLIK 390
Query: 396 LE 397
L+
Sbjct: 391 LQ 392
>UNIPROTKB|C0H4A0 [details] [associations]
symbol:PFD0450c "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380 GO:GO:0005681
EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 KO:K12844 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 HOGENOM:HOG000207983 RefSeq:XP_002808648.1
EnsemblProtists:PFD0450c:mRNA GeneID:812409 KEGG:pfa:PFD0450c
EuPathDB:PlasmoDB:PF3D7_0409100 ProtClustDB:CLSZ2433500
Uniprot:C0H4A0
Length = 534
Score = 253 (94.1 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 73/242 (30%), Positives = 119/242 (49%)
Query: 157 DTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA 216
D MI + + + +D E+ V++ Y FPEL I+ + Y V + + +
Sbjct: 152 DVMIEKCMETILKIDTEILNIHKYVKDIYSTKFPELDSIVYSPVEYISVVNKIRNEVDLK 211
Query: 217 KLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+DFS+ILP + A+ ++ G + D L N C++ + L EYR + YL+S+
Sbjct: 212 NIDFSDILPNTTVMAITVASSMTTGICLPDNLLKNCISFCNEGIQLNEYRNIILLYLESK 271
Query: 277 MNTVAPNLTALVGELVGARLIAHGGSLLNLAK-QPGSTVQILGAEKALFRALKTKHATPK 335
M +APN+T L+G + ARLI+ GSL NL+ + + I +K+LF L H T
Sbjct: 272 MFYLAPNVTMLLGSSLTARLISAVGSLKNLSIISSQNLIVIASTKKSLF-GLSNVHKTLG 330
Query: 336 YGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRN 395
G++ + +V +K K LASK +LA R D ++ GL R + + L
Sbjct: 331 IGILCCSEIVQSVPDAYKKKAISLLASKCSLAARIDYFKKYKEGQYGLLLRQYIISHLIK 390
Query: 396 LE 397
L+
Sbjct: 391 LQ 392
>RGD|1305832 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=IEA;ISO] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005687 "U4 snRNP" evidence=ISO]
[GO:0015030 "Cajal body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA;ISO] [GO:0070990 "snRNP binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR027105
Pfam:PF01798 RGD:1305832 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PANTHER:PTHR13904 EMBL:AC103574
IPI:IPI00948419 Ensembl:ENSRNOT00000064433 UCSC:RGD:1305832
ArrayExpress:F1M5K0 Uniprot:F1M5K0
Length = 195
Score = 189 (71.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 40/141 (28%), Positives = 78/141 (55%)
Query: 159 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 218
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 40 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 99
Query: 219 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 276
+ +IL + A + G ++SD +L ++E CD L L + ++Y+Y++SR
Sbjct: 100 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 159
Query: 277 MNTVAPNLTALVGELVGARLI 297
M+ +APNL+ ++G A+++
Sbjct: 160 MSFIAPNLSIIIGASTAAKIM 180
>ASPGD|ASPL0000059636 [details] [associations]
symbol:AN1260 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:BN001308
EMBL:AACD01000017 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 OMA:RDHYSIR OrthoDB:EOG4ZCXDV
RefSeq:XP_658864.1 ProteinModelPortal:Q5BDX0 STRING:Q5BDX0
EnsemblFungi:CADANIAT00001363 GeneID:2877039 KEGG:ani:AN1260.2
Uniprot:Q5BDX0
Length = 521
Score = 202 (76.2 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 69/273 (25%), Positives = 118/273 (43%)
Query: 173 ELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGD------------RSNAAKLDF 220
EL +R+ Y FPEL ++ ++I YAK V ++ + N +
Sbjct: 56 ELTRLHKSLRDHYSIRFPELETLVTNSIDYAKTVAILKNGPLTDIKALSTSADNMVGVPL 115
Query: 221 SEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTV 280
IL + + G E+++ +L + + C+++L L R L +++ MN +
Sbjct: 116 KSILDGPTLMVVAVEGTTTRGREMTEAELKVVMDTCERILKLDRERTALTQSIQANMNQI 175
Query: 281 APNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIY 340
APNL ALVG A+ + G L LAK P + G+++ T + G +Y
Sbjct: 176 APNLAALVGPETAAQFLNQTGGLRELAKIPACNLGAQGSKRKDGLGFATNTSIRSQGFLY 235
Query: 341 HASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKE 400
++ L+ K + R +++K LA+R D D S+G + + + RL L E
Sbjct: 236 NSELIQDIPNDLKRQAIRIVSAKMVLAVRADVSKYSPDGSLGEDLKQQCFQRLEKLT--E 293
Query: 401 LGRAAGSAKGKPKIEVYDKDRKKGPGAMITAAK 433
+G+ K P + DK +K G AK
Sbjct: 294 PPPNSGT-KALPAPD--DKPSRKRGGRRARKAK 323
>SGD|S000003323 [details] [associations]
symbol:PRP31 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000387 "spliceosomal snRNP assembly" evidence=IMP;IDA]
[GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=IEA;IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IPI]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR027105
SGD:S000003323 Pfam:PF01798 GO:GO:0005739 EMBL:BK006941
GO:GO:0005681 GO:GO:0003723 GO:GO:0000387 GO:GO:0046540
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
PROSITE:PS51358 GeneTree:ENSGT00550000075069 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OrthoDB:EOG4ZCXDV
EMBL:U31970 EMBL:Z72876 EMBL:AY723814 PIR:S64386 RefSeq:NP_011605.1
ProteinModelPortal:P49704 SMR:P49704 DIP:DIP-5355N IntAct:P49704
MINT:MINT-493013 STRING:P49704 PaxDb:P49704 EnsemblFungi:YGR091W
GeneID:852983 KEGG:sce:YGR091W CYGD:YGR091w HOGENOM:HOG000000957
OMA:HRISEAN NextBio:972794 Genevestigator:P49704 GermOnline:YGR091W
Uniprot:P49704
Length = 494
Score = 198 (74.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 83/331 (25%), Positives = 159/331 (48%)
Query: 111 MELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDL 170
+EL R + + +S + P + L L + ++ F K+ + I L+
Sbjct: 51 IELFRTLALISPDRLSLSETAQILPKIVDLKRILQQQEIDFI--KLLPFFNEIIPLIKSN 108
Query: 171 DKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPE-EVE 229
K ++ + + + Y FPEL+ +I + Y+K + ++ + N +K + E+ E +
Sbjct: 109 IKLMHNFLISL---YSRRFPELSSLIPSPLQYSKVISIL-ENENYSKNESDELFFHLENK 164
Query: 230 AQL-KEAAMI---SMGTEVSDLDLLNIKELCDQVL---SLAE--YRAQ--LYDYLKSRMN 278
A+L +E ++ SM T + + L+IK Q+L S+ E ++ Q + Y+ S+++
Sbjct: 165 AKLTREQILVLTMSMKTSFKNKEPLDIKTRT-QILEANSILENLWKLQEDIGQYIASKIS 223
Query: 279 TVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKT-KHATPKYG 337
+APN+ LVG + A+LIAH G +L ++ P + +G K L L T + + G
Sbjct: 224 IIAPNVCFLVGPEIAAQLIAHAGGVLEFSRIPSCNIASIGKNKHLSHELHTLESGVRQEG 283
Query: 338 LIYHASLVGQAAPK--HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRN 395
++ + ++ Q P HK ++ R L +K +LA R DA D + L ++ K E +
Sbjct: 284 YLFASDMI-QKFPVSVHK-QMLRMLCAKVSLAARVDAGQKNGDRNTVLAHKWKAEL---S 338
Query: 396 LEGKELGRAAGSAKGKPKIEVYDKDRKKGPG 426
+ ++L A ++ K D+ +KK G
Sbjct: 339 KKARKLSEAPSISETKALPIPEDQPKKKRAG 369
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 551 477 0.00079 119 3 11 23 0.44 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 609 (65 KB)
Total size of DFA: 242 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.24u 0.10s 42.34t Elapsed: 00:00:02
Total cpu time: 42.25u 0.10s 42.35t Elapsed: 00:00:02
Start: Sat May 11 05:11:19 2013 End: Sat May 11 05:11:21 2013