Query         008853
Match_columns 551
No_of_seqs    192 out of 1219
Neff          7.5 
Searched_HMMs 29240
Date          Mon Mar 25 13:15:49 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008853hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3smt_A Histone-lysine N-methyl 100.0 3.4E-68 1.2E-72  577.6  43.8  399   72-532    72-486 (497)
  2 2h21_A Ribulose-1,5 bisphospha 100.0 5.6E-66 1.9E-70  555.3  36.1  393   76-536     4-412 (440)
  3 3qxy_A N-lysine methyltransfer 100.0 3.7E-66 1.3E-70  556.5  34.3  399   70-526    14-447 (449)
  4 3qww_A SET and MYND domain-con  98.9   2E-08 6.8E-13  107.1  16.8   90  254-382   167-262 (433)
  5 3n71_A Histone lysine methyltr  98.9 4.3E-08 1.5E-12  106.2  18.9   94  252-382   163-274 (490)
  6 3qwp_A SET and MYND domain-con  98.8 4.2E-08 1.4E-12  104.5  16.5   89  255-382   168-262 (429)
  7 1n3j_A A612L, histone H3 lysin  97.5 3.5E-05 1.2E-09   67.0   2.4   49  321-369    59-108 (119)
  8 3f9x_A Histone-lysine N-methyl  96.4   0.003   1E-07   57.7   5.3   45  329-373   110-157 (166)
  9 3rq4_A Histone-lysine N-methyl  96.1  0.0032 1.1E-07   61.4   3.6   42  327-369   177-219 (247)
 10 2w5y_A Histone-lysine N-methyl  95.4   0.014 4.7E-07   54.8   5.1   43  327-369   125-170 (192)
 11 3s8p_A Histone-lysine N-methyl  95.4   0.011 3.8E-07   58.3   4.7   43  326-369   205-248 (273)
 12 3ope_A Probable histone-lysine  94.7   0.023 7.8E-07   54.6   4.3   41  329-369   149-192 (222)
 13 2f69_A Histone-lysine N-methyl  94.6   0.021   7E-07   56.3   4.0   40  329-368   189-232 (261)
 14 3h6l_A Histone-lysine N-methyl  94.4   0.029 9.8E-07   55.8   4.3   40  329-368   193-235 (278)
 15 3ooi_A Histone-lysine N-methyl  94.2   0.035 1.2E-06   53.7   4.3   41  329-369   168-211 (232)
 16 2qpw_A PR domain zinc finger p  94.0   0.052 1.8E-06   48.7   4.8   44  328-371   101-146 (149)
 17 1h3i_A Histone H3 lysine 4 spe  93.1   0.051 1.7E-06   54.3   3.6   40  329-368   243-286 (293)
 18 3bo5_A Histone-lysine N-methyl  92.7   0.097 3.3E-06   52.3   4.9   40  329-368   208-251 (290)
 19 3hna_A Histone-lysine N-methyl  92.6   0.082 2.8E-06   52.7   4.2   23  346-368   243-265 (287)
 20 1ml9_A Histone H3 methyltransf  92.3    0.12 3.9E-06   52.0   4.9   40  329-368   223-269 (302)
 21 3db5_A PR domain zinc finger p  91.6    0.17 5.7E-06   45.5   4.7   41  329-369   100-142 (151)
 22 3ep0_A PR domain zinc finger p  91.4    0.18 6.1E-06   46.2   4.7   41  329-369   104-146 (170)
 23 2r3a_A Histone-lysine N-methyl  91.2    0.17 5.9E-06   50.7   4.7   42  328-369   217-265 (300)
 24 1mvh_A Cryptic LOCI regulator   91.1    0.16 5.6E-06   50.8   4.4   41  328-368   215-262 (299)
 25 3dal_A PR domain zinc finger p  90.0    0.39 1.3E-05   44.9   5.7   50  329-382   134-185 (196)
 26 3f9x_A Histone-lysine N-methyl  86.2    0.62 2.1E-05   42.1   4.4   47   78-131    16-62  (166)
 27 3ihx_A PR domain zinc finger p  82.3     1.1 3.7E-05   40.2   4.0   39  330-368   100-140 (152)
 28 3ray_A PR domain-containing pr  80.4     1.5   5E-05   42.2   4.5   40  329-368   143-184 (237)
 29 1n3j_A A612L, histone H3 lysin  75.8     1.3 4.4E-05   37.6   2.4   30   94-129     5-34  (119)
 30 3ope_A Probable histone-lysine  71.3     3.5 0.00012   39.1   4.4   37   89-131    70-106 (222)
 31 3ooi_A Histone-lysine N-methyl  66.1     4.7 0.00016   38.5   4.1   30   94-129    93-122 (232)
 32 3s8p_A Histone-lysine N-methyl  65.0     5.6 0.00019   39.0   4.5   35   94-129   132-166 (273)
 33 3rq4_A Histone-lysine N-methyl  62.1       7 0.00024   37.7   4.5   38   94-132   104-141 (247)
 34 3h6l_A Histone-lysine N-methyl  61.3     7.7 0.00026   38.1   4.8   31   94-130   118-148 (278)
 35 3hna_A Histone-lysine N-methyl  59.2     8.3 0.00028   38.1   4.6   30   94-129   148-177 (287)
 36 1h3i_A Histone H3 lysine 4 spe  57.1     8.6 0.00029   37.8   4.3   32   94-129   164-195 (293)
 37 2f69_A Histone-lysine N-methyl  54.2      11 0.00037   36.7   4.4   32   94-129   110-141 (261)
 38 3bo5_A Histone-lysine N-methyl  53.9      11 0.00039   37.1   4.6   30   94-129   127-156 (290)
 39 1mvh_A Cryptic LOCI regulator   48.5      15 0.00053   36.3   4.6   30   94-129   138-167 (299)
 40 2r3a_A Histone-lysine N-methyl  47.9      16 0.00056   36.1   4.6   21  111-131   153-173 (300)
 41 2w5y_A Histone-lysine N-methyl  44.2      14 0.00047   34.2   3.2   32   94-131    53-84  (192)
 42 2qpw_A PR domain zinc finger p  33.6      26  0.0009   30.8   3.2   31   93-127    29-59  (149)
 43 3ep0_A PR domain zinc finger p  28.3      39  0.0013   30.5   3.4   32   93-128    27-58  (170)
 44 1ml9_A Histone H3 methyltransf  26.9      39  0.0013   33.4   3.4   31   94-130   134-164 (302)
 45 3db5_A PR domain zinc finger p  21.5      55  0.0019   28.7   3.0   31   93-128    23-53  (151)
 46 1ou8_A Stringent starvation pr  21.4      63  0.0022   27.0   3.1   57   72-137     7-63  (111)
 47 1wvo_A Sialic acid synthase; a  21.1      35  0.0012   26.6   1.4   14  112-125     8-21  (79)

No 1  
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=100.00  E-value=3.4e-68  Score=577.62  Aligned_cols=399  Identities=24%  Similarity=0.364  Sum_probs=340.3

Q ss_pred             cccccchhHHHHHHHHCCCCCCCcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCccCccchhcccCCchHHHhhhh
Q 008853           72 SKKEEDLGDLKSWMHKNGLPPCKVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPNSLVVTLERVLGNETIAELLTT  151 (551)
Q Consensus        72 ~~~~~~~~~l~~Wl~~~G~~~~~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~~~~lt~~~a~~~~~~~~ll~~  151 (551)
                      +.+.+.+.+|++|+++||+.+++|+++.+++   .|+   ||+|+++|++|++|++||.+++||.+++..+ .++.++..
T Consensus        72 ~~r~~~~~~ll~W~~~~G~~~~~v~i~~~~~---~Gr---Gl~A~~dI~~ge~ll~IP~~lllt~~~a~~s-~l~~~~~~  144 (497)
T 3smt_A           72 GKREDYFPDLMKWASENGASVEGFEMVNFKE---EGF---GLRATRDIKAEELFLWVPRKLLMTVESAKNS-VLGPLYSQ  144 (497)
T ss_dssp             SCGGGGHHHHHHHHHHTTCCCTTEEEEEETT---TEE---EEEESSCBCTTCEEEEEEGGGCEEHHHHHTS-TTHHHHHH
T ss_pred             cccHHHHHHHHHHHHHCCCCccceEEEEcCC---Ccc---EEEEcccCCCCCEEEEcCHHHhCcHHhhhhh-hccccccc
Confidence            4557889999999999999999999998863   354   5999999999999999999999999998653 34544433


Q ss_pred             CC---CCchHHHHHHHHHHHhcCCCCCcHHHHHhcCcCcCCCccCcCCCCCCCHHHHhhccCCchHHHHHHHHHHHHHHH
Q 008853          152 NK---LSELACLALYLMYEKKQGKKSFWLPYIRELDRQRGRGQLAVESPLLWSETELAYLTGSPTKAEILERAEGIKREY  228 (551)
Q Consensus       152 ~~---l~~~~~Lal~Ll~Er~~g~~S~W~pYi~~LP~~~~~~~~~~~~Pl~Ws~~El~~L~gt~l~~~v~~~~~~i~~~y  228 (551)
                      ..   ...+..|+++|++|+. |+.|+|+|||++||+       .+++|++|+++|+++|+||++...+.++.+.+.++|
T Consensus       145 ~~~l~~~~~~~Lal~Ll~E~~-~~~S~w~pYl~~LP~-------~~~~pl~w~~eel~~L~gt~l~~~v~~~~~~~~~~~  216 (497)
T 3smt_A          145 DRILQAMGNIALAFHLLCERA-SPNSFWQPYIQTLPS-------EYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQY  216 (497)
T ss_dssp             CHHHHHCHHHHHHHHHHHHHT-CTTCTTHHHHTTSCS-------CCCSGGGCCHHHHHTTSSSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccHHHHHHHHHHHhc-CCCCchHHHHHhCCC-------CCCCCCcCCHHHHhhccCCcHHHHHHHHHHHHHHHH
Confidence            11   1246789999999996 899999999999999       579999999999999999999999988888888899


Q ss_pred             HHHHHHHHHhhhhhhcCCCC--CC-CCCCCHHHHHHHHHHhhhceeeccccCCCCCCCCcchhhhcccccccccCCCCCC
Q 008853          229 NELDTVWFMAGSLFQQYPYD--IP-TEAFTFEIFKQAFVAVQSCVVHLQRCGCTPQMGTESFASHLVHLQTSCTTTRTPL  305 (551)
Q Consensus       229 ~~l~~~~~~~~~l~~~~p~~--~~-~~~~t~e~f~wA~~~V~SRa~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~l  305 (551)
                      ..+..       +++.+|..  ++ .+.||+++|+||+++|+||+|.++..                             
T Consensus       217 ~~~~~-------~~~~~p~~~~~~~~~~~t~e~f~wA~~~v~SRa~~~~~~-----------------------------  260 (497)
T 3smt_A          217 AYFYK-------VIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTE-----------------------------  260 (497)
T ss_dssp             HHHHH-------HC----CCCCSTTTTCCCHHHHHHHHHHHHHHCEEEECT-----------------------------
T ss_pred             HHHHH-------HHHhCcccccCccccccCHHHHHHhhheEecccccccCc-----------------------------
Confidence            87653       35555542  22 46799999999999999999987520                             


Q ss_pred             CCCCCCcccccccccccccccCccccCCCcccceeEeeeCCeEEEEEcccCCCCCeEEeecCCCChHHHHHhcCcccCCC
Q 008853          306 SPTHNPKEKVSLARRFALVPLGPPLLAYSSKCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQPNSKLLINYGFVDEDN  385 (551)
Q Consensus       306 ~~~~~~~~~~~~~~~~~LvP~~DmlNh~~~~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~sN~~LL~~YGFv~~~N  385 (551)
                             ++.  ....+|||++||+||.+..+++.|+.+++.+.+++.++|++||||||+||+++|++||++|||++++|
T Consensus       261 -------~g~--~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~isYG~~~n~~Ll~~YGFv~~~N  331 (497)
T 3smt_A          261 -------DGS--RVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNN  331 (497)
T ss_dssp             -------TSS--SEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEECCCSCCHHHHHHHHSCCCTTC
T ss_pred             -------ccc--cccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEEeCCCCChHHHHHHCCCCCCCC
Confidence                   011  12469999999999976666778888889999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEEecCCCCcchHHHHHHHHHcCCCcccEEEEEeCCccchHhhhhHHHHhhcCCChHHHHHHHHhc--------
Q 008853          386 PYDRLVVEAALNTEDPQYQDKRMVAQRNGKLSVQVFHVHAGREKEAISDMLPYLRLGYVSDTSEMQSVISSL--------  457 (551)
Q Consensus       386 p~D~v~l~l~l~~~d~~~~~k~~lL~~~g~~~~~~f~l~~~~~~~~~~~Ll~~lRl~~~~~~~El~~~~~~~--------  457 (551)
                      |+|.|.|++.++..|+++..|.++|+.+|+....+|.++.++ .+++.+|+++||+++++ ++|+..+....        
T Consensus       332 p~D~v~l~l~~~~~d~l~~~K~~~L~~~gl~~~~~f~l~~~~-~~~~~~Ll~~LRvl~~~-~~el~~~~~~~~~~~~~~~  409 (497)
T 3smt_A          332 SHDRVKIKLGVSKSDRLYAMKAEVLARAGIPTSSVFALHFTE-PPISAQLLAFLRVFCMT-EEELKEHLLGDSAIDRIFT  409 (497)
T ss_dssp             TTCEEEEEEECCTTSTTHHHHHHHHHHTTCCSEEEEEEESSS-SCSCHHHHHHHHHHTCC-HHHHHHHHHTCSSSCTTTT
T ss_pred             CCceEEEEecCCCcchhHHHHHHHHHHcCCCccceeeeecCC-CCCCHHHHHHHHHHhCC-HHHHHHHhcccchhhhhhh
Confidence            999999999999999999999999999999888889987654 35789999999999995 68888776532        


Q ss_pred             --CCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008853          458 --GPICPVSPCMERAVLDQLADYFKARLAGYPATLSEDEAMLTDYNLHPKKRVATQLVRMEKKMLNACLQVTADMIM  532 (551)
Q Consensus       458 --~~~~~~s~~nE~~vl~~L~~~l~~~L~~y~tt~eeDe~~L~~~~~s~r~~~A~~~R~~EK~IL~~~l~~l~~~~~  532 (551)
                        ...+|+|.+||.++++.|...|..+|+.|+||++||+++|+++.++.|+++|+++|+|||+||+++++.+++...
T Consensus       410 l~~~~~piS~~nE~~v~~~L~~~~~~~L~~Y~TtieeDe~lL~~~~ls~r~r~Av~vR~gEK~IL~~~l~~~~~~~~  486 (497)
T 3smt_A          410 LGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVKSAAVNRE  486 (497)
T ss_dssp             TTCTTSCSCHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCChhhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              124678999999999999999999999999999999999998888999999999999999999999999986544


No 2  
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=100.00  E-value=5.6e-66  Score=555.29  Aligned_cols=393  Identities=22%  Similarity=0.331  Sum_probs=330.7

Q ss_pred             cchhHHHHHHHHCCCCCCCcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCccCccchhcccCCchHHHhhhhCCCC
Q 008853           76 EDLGDLKSWMHKNGLPPCKVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPNSLVVTLERVLGNETIAELLTTNKLS  155 (551)
Q Consensus        76 ~~~~~l~~Wl~~~G~~~~~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~~~~lt~~~a~~~~~~~~ll~~~~l~  155 (551)
                      +.+++|++|++++|+..+++.+.....  +.||   ||+|+++|++||+|++||.+++||.+++..+ .+++++.  +++
T Consensus         4 ~~~~~f~~W~~~~G~~~~~~~v~~~~~--~~Gr---Gl~A~~~I~~ge~ll~IP~~~~ls~~~~~~~-~~~~~~~--~~~   75 (440)
T 2h21_A            4 PAVQTFWKWLQEEGVITAKTPVKASVV--TEGL---GLVALKDISRNDVILQVPKRLWINPDAVAAS-EIGRVCS--ELK   75 (440)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCSEEEEEE--TTEE---EEEESSCBCTTEEEEEEEGGGCCSHHHHTTS-TTHHHHT--TSC
T ss_pred             HHHHHHHHHHHHCCCCcCCceeeeccC--CCCC---EEEEcccCCCCCEEEEeChhHhccHHHhcch-hHHHHHh--ccC
Confidence            578999999999999988665554321  1254   5999999999999999999999999998654 4676664  467


Q ss_pred             chHHHHHHHHHHHhcCCCCCcHHHHHhcCcCcCCCccCcCCCCCCCHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHH
Q 008853          156 ELACLALYLMYEKKQGKKSFWLPYIRELDRQRGRGQLAVESPLLWSETELAYLTGSPTKAEILERAEGIKREYNELDTVW  235 (551)
Q Consensus       156 ~~~~Lal~Ll~Er~~g~~S~W~pYi~~LP~~~~~~~~~~~~Pl~Ws~~El~~L~gt~l~~~v~~~~~~i~~~y~~l~~~~  235 (551)
                      +|..|+++|++|+ +|+.|+|+|||++||+       .+++|++|+++|+++|+||++...+.++++.+.++|+.+..  
T Consensus        76 ~~~~Lal~Ll~E~-~g~~S~w~pYl~~LP~-------~~~~p~~w~~~el~~L~gt~l~~~~~~~~~~~~~~~~~~~~--  145 (440)
T 2h21_A           76 PWLSVILFLIRER-SREDSVWKHYFGILPQ-------ETDSTIYWSEEELQELQGSQLLKTTVSVKEYVKNECLKLEQ--  145 (440)
T ss_dssp             HHHHHHHHHHHHH-HCTTCTTHHHHTTSCS-------CCSCTTTCCHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             cHHHHHHHHHHHh-cCCCCcHHHHHHhcCC-------CCCCcccCCHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHH--
Confidence            8999999999999 7999999999999999       47899999999999999999999999888999999998764  


Q ss_pred             HHhhhhhhcCCCCCCCCCCCHHHHHHHHHHhhhceeeccccCCCCCCCCcchhhhcccccccccCCCCCCCCCCCCcccc
Q 008853          236 FMAGSLFQQYPYDIPTEAFTFEIFKQAFVAVQSCVVHLQRCGCTPQMGTESFASHLVHLQTSCTTTRTPLSPTHNPKEKV  315 (551)
Q Consensus       236 ~~~~~l~~~~p~~~~~~~~t~e~f~wA~~~V~SRa~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~  315 (551)
                          .++..+|..++. .+|++.|+||+++|+||+|+...                                      + 
T Consensus       146 ----~~~~~~~~~f~~-~~t~~~f~wA~~~v~SRaf~~~~--------------------------------------~-  181 (440)
T 2h21_A          146 ----EIILPNKRLFPD-PVTLDDFFWAFGILRSRAFSRLR--------------------------------------N-  181 (440)
T ss_dssp             ----HTTSTTTTTCCS-CCCHHHHHHHHHHHHHHCBCCC-----------------------------------------
T ss_pred             ----HHHHhChhhCCC-CCCHHHHHHHHHHhcccceeccC--------------------------------------C-
Confidence                356666666654 46999999999999999997431                                      1 


Q ss_pred             cccccccccccCccccCCCcc--cceeEee--------eCCeEEEEEcccCCCCCeEEeecCCC-ChHHHHHhcCcccCC
Q 008853          316 SLARRFALVPLGPPLLAYSSK--CKAMLAA--------VDDAVQLVVDRPYKAGESIVVWCGPQ-PNSKLLINYGFVDED  384 (551)
Q Consensus       316 ~~~~~~~LvP~~DmlNh~~~~--~~a~~~~--------~~~~~~l~a~r~i~~GeEvfi~YG~~-sN~~LL~~YGFv~~~  384 (551)
                         +..+|||++||+||....  +++.|..        .+++++|++.++|++||||||+||++ +|++||++||||+++
T Consensus       182 ---~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~~~N~~LL~~YGFv~~~  258 (440)
T 2h21_A          182 ---ENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLNKSNAELALDYGFIEPN  258 (440)
T ss_dssp             ----CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTTCCHHHHHHHSSCCCSC
T ss_pred             ---CceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCCCCHHHHHHhCCCCcCC
Confidence               247999999999996532  3455553        34689999999999999999999999 999999999999999


Q ss_pred             CCCCeEEEEEecCCCCcchHHHHHHHHHcCCCcccEEEEEeCCccchHhhhhHHHHhhcCCChHH--HHHHHHhc---CC
Q 008853          385 NPYDRLVVEAALNTEDPQYQDKRMVAQRNGKLSVQVFHVHAGREKEAISDMLPYLRLGYVSDTSE--MQSVISSL---GP  459 (551)
Q Consensus       385 Np~D~v~l~l~l~~~d~~~~~k~~lL~~~g~~~~~~f~l~~~~~~~~~~~Ll~~lRl~~~~~~~E--l~~~~~~~---~~  459 (551)
                      ||+|.+.|.+.++..|+++..|.++++.+|+.....|.+..++.  ++.+|++++|++++++.+.  +.++..+.   ..
T Consensus       259 n~~d~~~l~l~~~~~d~~~~~k~~~l~~~gl~~~~~f~i~~~~~--~~~~ll~~lR~l~~~~~~~~~~~~~~~~~~~~~~  336 (440)
T 2h21_A          259 ENRHAYTLTLEISESDPFFDDKLDVAESNGFAQTAYFDIFYNRT--LPPGLLPYLRLVALGGTDAFLLESLFRDTIWGHL  336 (440)
T ss_dssp             GGGCEEEEEEECCTTSTTHHHHHHHHHTTTCCSEEEEEEETTSC--CCTTHHHHHHHHHCCGGGGGGGSGGGTTTHHHHH
T ss_pred             CCCCeEEEEeecCCccccHHHHHHHHHHcCCCCCceEEeecCCC--CCHHHHHHHHHHhCChhhHHHHHHHHhhhhhccc
Confidence            99999999999999999999999999999987778899887643  5789999999999864332  11121110   01


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 008853          460 ICPVSPCMERAVLDQLADYFKARLAGYPATLSEDEAMLTDYNLHPKKRVATQLVRMEKKMLNACLQVTADMIMLLPD  536 (551)
Q Consensus       460 ~~~~s~~nE~~vl~~L~~~l~~~L~~y~tt~eeDe~~L~~~~~s~r~~~A~~~R~~EK~IL~~~l~~l~~~~~~l~d  536 (551)
                      ..++|.+||.++++.|.+.|+.+|+.|+||++||+++ +++..+.|+++|++||++||+||+++++.+++.++.|..
T Consensus       337 ~~~~s~~~E~~~~~~L~~~~~~~L~~y~TtieeD~~l-~~~~~~~r~~~A~~~R~~EK~iL~~~~~~~~~~~~~l~~  412 (440)
T 2h21_A          337 ELSVSRDNEELLCKAVREACKSALAGYHTTIEQDREL-KEGNLDSRLAIAVGIREGEKMVLQQIDGIFEQKELELDQ  412 (440)
T ss_dssp             HHCCCHHHHHHHHHHHHHHHHHHHTTCSSCHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             cCCCChhHHHHHHHHHHHHHHHHHHhCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            2478999999999999999999999999999999998 777788999999999999999999999999999988864


No 3  
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=100.00  E-value=3.7e-66  Score=556.49  Aligned_cols=399  Identities=20%  Similarity=0.252  Sum_probs=321.1

Q ss_pred             cccccccchhHHHHHHHHCCCCCC-CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCccCccchhcccCCchHHHh
Q 008853           70 VVSKKEEDLGDLKSWMHKNGLPPC-KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPNSLVVTLERVLGNETIAEL  148 (551)
Q Consensus        70 ~~~~~~~~~~~l~~Wl~~~G~~~~-~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~~~~lt~~~a~~~~~~~~l  148 (551)
                      .+....+.+++|++|+++||+.++ +|++...+.  +.||   ||+|+++|++|++|++||.+++||.+++.    ++++
T Consensus        14 ~~~~~~~~~~~ll~W~~~~G~~~~~~v~i~~~~~--~~G~---Gv~A~~dI~~ge~ll~IP~~~~ls~~~~~----~~~~   84 (449)
T 3qxy_A           14 VDGGDLDPVACFLSWCRRVGLELSPKVAVSRQGT--VAGY---GMVARESVQAGELLFVVPRAALLSQHTCS----IGGL   84 (449)
T ss_dssp             -----CHHHHHHHHHHHHHTCEECTTEEEESSSC--SSSS---EEEESSCBCTTCEEEEEEGGGCBSTTTST----THHH
T ss_pred             cCCCCcHHHHHHHHHHHHCCCeeCCceEEEecCC--CceE---EEEECCCCCCCCEEEEeCcHHhcChhhhh----HHHH
Confidence            334556789999999999999987 899886532  2465   49999999999999999999999999873    3444


Q ss_pred             hhh-----CCCCchHHHHHHHHHHHhcCCCCCcHHHHHhcCcCcCCCccCcCCCCCCCHHHHh-hccCCchHHHHHHHHH
Q 008853          149 LTT-----NKLSELACLALYLMYEKKQGKKSFWLPYIRELDRQRGRGQLAVESPLLWSETELA-YLTGSPTKAEILERAE  222 (551)
Q Consensus       149 l~~-----~~l~~~~~Lal~Ll~Er~~g~~S~W~pYi~~LP~~~~~~~~~~~~Pl~Ws~~El~-~L~gt~l~~~v~~~~~  222 (551)
                      +..     ..+++|..|+++||+|+. |++|+|+|||++||+..     .+++|+||+++|+. +|+||++...+.++++
T Consensus        85 l~~~~~~l~~~~~~~~L~l~Ll~E~~-g~~S~W~pYl~~LP~~~-----~~~~Pl~Ws~eEl~elL~gt~l~~~~~~~~~  158 (449)
T 3qxy_A           85 LERERVALQSQSGWVPLLLALLHELQ-APASRWRPYFALWPELG-----RLEHPMFWPEEERRCLLQGTGVPEAVEKDLA  158 (449)
T ss_dssp             HHHTTGGGCCSSSCHHHHHHHHHHHH-CTTCTTHHHHTTSCCGG-----GCCCGGGSCHHHHHHHHTTSSHHHHHHHHHH
T ss_pred             HHHhhhhhccCCcHHHHHHHHHHHHh-CCCCchHHHHHhCCCcc-----CCCCccccCHHHHHHHHhcccHHHHHHHHHH
Confidence            432     245789999999999995 89999999999999853     47999999999996 7999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCCCHHHHHHHHHHhhhceeeccccCCCCCCCCcchhhhcccccccccCCC
Q 008853          223 GIKREYNELDTVWFMAGSLFQQYPYDIPTEAFTFEIFKQAFVAVQSCVVHLQRCGCTPQMGTESFASHLVHLQTSCTTTR  302 (551)
Q Consensus       223 ~i~~~y~~l~~~~~~~~~l~~~~p~~~~~~~~t~e~f~wA~~~V~SRa~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  302 (551)
                      .+.++|..+..      ++++.+|..|+...+|++.|+||+++|+||+|++...+                         
T Consensus       159 ~i~~~y~~~~~------~~~~~~p~~f~~~~~t~e~f~wA~~~v~SRsf~~~~~~-------------------------  207 (449)
T 3qxy_A          159 NIRSEYQSIVL------PFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEE-------------------------  207 (449)
T ss_dssp             HHHHHHHHTHH------HHHHHCTTTSCGGGCCHHHHHHHHHHHHHHCBCCCCC--------------------------
T ss_pred             HHHHHHHHHHH------HHHHhCccccCcccCcHHHHHHHHHHHHHHhcccccCc-------------------------
Confidence            99999998743      45677787777778999999999999999999875100                         


Q ss_pred             CCCCCCCCCcccccccccccccccCccccCCCcccceeEeeeCCeEEEEEcccCCCCCeEEeecCCCChHHHHHhcCccc
Q 008853          303 TPLSPTHNPKEKVSLARRFALVPLGPPLLAYSSKCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQPNSKLLINYGFVD  382 (551)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~~~LvP~~DmlNh~~~~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~sN~~LL~~YGFv~  382 (551)
                            .+   +.......+|||++||+||.. .+++.+..+++++++++.++|++||||||+||+++|++||++||||+
T Consensus       208 ------~~---~~~~~~~~~LvP~~D~~NH~~-~~~~~~~~~~~~~~~~a~~~i~~Geei~~~YG~~~n~~ll~~YGF~~  277 (449)
T 3qxy_A          208 ------EE---DEKEPNSPVMVPAADILNHLA-NHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFVE  277 (449)
T ss_dssp             -------------CCCCCCBBCTTGGGCEECS-SCSEEEEECSSEEEEEESSCBCTTCEEEECCSSCCHHHHHHHHSCCC
T ss_pred             ------cc---ccccCCceeEeecHHHhcCCC-CCCeEEEEeCCeEEEEECCCcCCCchhhccCCCCCHHHHHHhCCCCC
Confidence                  00   000124679999999999954 45667777788999999999999999999999999999999999999


Q ss_pred             C--CCCCCeEEEEEecCC----------CCc-chHHHHHHHHHcCCCc-ccEEEEEeCCccchHhhhhHHHHhhcCCChH
Q 008853          383 E--DNPYDRLVVEAALNT----------EDP-QYQDKRMVAQRNGKLS-VQVFHVHAGREKEAISDMLPYLRLGYVSDTS  448 (551)
Q Consensus       383 ~--~Np~D~v~l~l~l~~----------~d~-~~~~k~~lL~~~g~~~-~~~f~l~~~~~~~~~~~Ll~~lRl~~~~~~~  448 (551)
                      +  +||+|.|.|++.+..          .|+ +++.|.++|+.+|++. ...|.+..++. ..+.+|+++||+++|+ ++
T Consensus       278 ~~~~N~~D~~~l~~~~~~~~~l~~~~~~~d~~~~~~k~~~L~~~~~~~~~~~f~l~~~~~-~~~~~ll~~LR~l~~~-~~  355 (449)
T 3qxy_A          278 PYPDNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREEV-LTEEELTTTLKVLCMP-AE  355 (449)
T ss_dssp             CTTSCTTCEEEEEHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHTTSCCTTCEEEEESSBB-SSHHHHHHHHHHHHSC-HH
T ss_pred             CCCCCCCcEEEEechhhHHHHhhcccccchhHHHHHHHHHHHhCCCCCCCCceEecCCCC-CCCHHHHHHHHHHhCC-HH
Confidence            8  999999999975421          233 5678899999999764 47898876532 2257899999999996 78


Q ss_pred             HHHHHHHhcC----CCCCCCh-----HHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHhhccC----CCChhHHHHHHHHH
Q 008853          449 EMQSVISSLG----PICPVSP-----CMERAVL-DQLADYFKARLAGYPATLSEDEAMLTDY----NLHPKKRVATQLVR  514 (551)
Q Consensus       449 El~~~~~~~~----~~~~~s~-----~nE~~vl-~~L~~~l~~~L~~y~tt~eeDe~~L~~~----~~s~r~~~A~~~R~  514 (551)
                      |++.+.....    .....+.     .+|.+++ +.|.++|+.+|++|+||++||+++|++.    .++.|+++|+++|+
T Consensus       356 e~~~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~~~~l~~~~~~~L~~Y~TtleeD~~lL~~~~~~~~l~~r~~~Av~vR~  435 (449)
T 3qxy_A          356 EFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQLLQNSVLLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRY  435 (449)
T ss_dssp             HHHHHHHC------CCCCCCCBTTTGGGSCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHCHHHHHHSCHHHHHHHHHHH
T ss_pred             HHHHHHhccCcccccchhccccccccccccHHHHHHHHHHHHHHHhhCCCcHHHHHHHHhCcccccccCHHHHHHHHHHH
Confidence            8988887642    1112222     2355777 5688899999999999999999999764    47899999999999


Q ss_pred             HHHHHHHHHHHH
Q 008853          515 MEKKMLNACLQV  526 (551)
Q Consensus       515 ~EK~IL~~~l~~  526 (551)
                      +||+||+++++.
T Consensus       436 gEK~IL~~~l~~  447 (449)
T 3qxy_A          436 GQKMILHQLLEL  447 (449)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999999984


No 4  
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.91  E-value=2e-08  Score=107.12  Aligned_cols=90  Identities=11%  Similarity=0.015  Sum_probs=67.7

Q ss_pred             CCHHHHHHHHHHhhhceeeccccCCCCCCCCcchhhhcccccccccCCCCCCCCCCCCcccccccccccccccCccccCC
Q 008853          254 FTFEIFKQAFVAVQSCVVHLQRCGCTPQMGTESFASHLVHLQTSCTTTRTPLSPTHNPKEKVSLARRFALVPLGPPLLAY  333 (551)
Q Consensus       254 ~t~e~f~wA~~~V~SRa~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~LvP~~DmlNh~  333 (551)
                      .+.+.+.-.+.++.+.+|.+...                                    +..  .-..+|.|.+.++||.
T Consensus       167 ~~~~~i~~~~~~~~~N~f~i~~~------------------------------------~~~--~~g~gl~p~~s~~NHs  208 (433)
T 3qww_A          167 PDHSSLVVLFAQVNCNGFTIEDE------------------------------------ELS--HLGSAIFPDVALMNHS  208 (433)
T ss_dssp             CCHHHHHHHHHHHHHHCEEEECT------------------------------------TCC--EEEEEECTTGGGSEEC
T ss_pred             CCHHHHHHHHHHHcCCceecccC------------------------------------Ccc--ceeEEecccccccCCC
Confidence            46788888899999999987521                                    000  0136899999999996


Q ss_pred             CcccceeEeeeCCeEEEEEcccCCCCCeEEeecCCCC------hHHHHHhcCccc
Q 008853          334 SSKCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQP------NSKLLINYGFVD  382 (551)
Q Consensus       334 ~~~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~s------N~~LL~~YGFv~  382 (551)
                      +. .|+.+..+++.+.++|.++|++||||+++|++..      ...|...|||.=
T Consensus       209 C~-PN~~~~~~~~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C  262 (433)
T 3qww_A          209 CC-PNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTC  262 (433)
T ss_dssp             SS-CSEEEEEETTEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCC
T ss_pred             CC-CCceEEEcCCEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEe
Confidence            52 2444445678899999999999999999999864      355666899964


No 5  
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.89  E-value=4.3e-08  Score=106.17  Aligned_cols=94  Identities=14%  Similarity=0.130  Sum_probs=69.7

Q ss_pred             CCCCHHHHHHHHHHhhhceeeccccCCCCCCCCcchhhhcccccccccCCCCCCCCCCCCcccccccccccccccCcccc
Q 008853          252 EAFTFEIFKQAFVAVQSCVVHLQRCGCTPQMGTESFASHLVHLQTSCTTTRTPLSPTHNPKEKVSLARRFALVPLGPPLL  331 (551)
Q Consensus       252 ~~~t~e~f~wA~~~V~SRa~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~LvP~~DmlN  331 (551)
                      ..++.+.+.+.++++.+.+|.+...                                    ++.. .-..+|.|.+.++|
T Consensus       163 ~~~~~~~l~~~~~~~~~N~f~i~~~------------------------------------~g~~-~~g~gl~p~~s~~N  205 (490)
T 3n71_A          163 QQFSMQYISHIFGVINCNGFTLSDQ------------------------------------RGLQ-AVGVGIFPNLGLVN  205 (490)
T ss_dssp             CCCCHHHHHHHHHHHHTTEEEEECT------------------------------------TSCS-EEEEEECTTGGGCE
T ss_pred             cCCCHHHHHHHHHHHhccCcccccC------------------------------------CCCc-cceEEEchhhhhcc
Confidence            4578999999999999999987520                                    0000 12468999999999


Q ss_pred             CCC-cccceeEeeeC-----------CeEEEEEcccCCCCCeEEeecCCCC------hHHHHHhcCccc
Q 008853          332 AYS-SKCKAMLAAVD-----------DAVQLVVDRPYKAGESIVVWCGPQP------NSKLLINYGFVD  382 (551)
Q Consensus       332 h~~-~~~~a~~~~~~-----------~~~~l~a~r~i~~GeEvfi~YG~~s------N~~LL~~YGFv~  382 (551)
                      |++ +++.+.++..+           ..+.++|.|+|++||||+++|++..      ...|...|||.=
T Consensus       206 HSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C  274 (490)
T 3n71_A          206 HDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDC  274 (490)
T ss_dssp             ECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCC
T ss_pred             cCCCCCeeEEecCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEe
Confidence            965 45555554331           2899999999999999999999743      255677899963


No 6  
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.84  E-value=4.2e-08  Score=104.49  Aligned_cols=89  Identities=16%  Similarity=0.044  Sum_probs=64.8

Q ss_pred             CHHHHHHHHHHhhhceeeccccCCCCCCCCcchhhhcccccccccCCCCCCCCCCCCcccccccccccccccCccccCCC
Q 008853          255 TFEIFKQAFVAVQSCVVHLQRCGCTPQMGTESFASHLVHLQTSCTTTRTPLSPTHNPKEKVSLARRFALVPLGPPLLAYS  334 (551)
Q Consensus       255 t~e~f~wA~~~V~SRa~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~LvP~~DmlNh~~  334 (551)
                      +.+.+...++++.+.+|.+...                                    +..  ....+|.|.+.++||++
T Consensus       168 ~~~~~~~~~~~~~~N~f~i~~~------------------------------------~~~--~~g~~l~~~~s~~NHsC  209 (429)
T 3qwp_A          168 PAFDLFEAFAKVICNSFTICNA------------------------------------EMQ--EVGVGLYPSISLLNHSC  209 (429)
T ss_dssp             TTCCHHHHHHHHHHHCEEEECT------------------------------------TSC--EEEEEECTTGGGCEECS
T ss_pred             CHHHHHHHHHHHHhcCcccccc------------------------------------ccc--cceEEEchhhHhhCcCC
Confidence            4456778889999999987520                                    011  12468999999999965


Q ss_pred             cccceeEeeeCCeEEEEEcccCCCCCeEEeecCCCC------hHHHHHhcCccc
Q 008853          335 SKCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQP------NSKLLINYGFVD  382 (551)
Q Consensus       335 ~~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~s------N~~LL~~YGFv~  382 (551)
                      . .|+.+..+++.+.++|.++|++||||+++|++..      ...|...|||.=
T Consensus       210 ~-PN~~~~~~~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C  262 (429)
T 3qwp_A          210 D-PNCSIVFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFEC  262 (429)
T ss_dssp             S-CSEEEEEETTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCC
T ss_pred             C-CCeEEEEeCCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEe
Confidence            2 2444444578899999999999999999999742      345667899963


No 7  
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=97.50  E-value=3.5e-05  Score=66.95  Aligned_cols=49  Identities=16%  Similarity=0.213  Sum_probs=39.3

Q ss_pred             ccccccCccccCCC-cccceeEeeeCCeEEEEEcccCCCCCeEEeecCCC
Q 008853          321 FALVPLGPPLLAYS-SKCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       321 ~~LvP~~DmlNh~~-~~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      ..+.|++.++||.+ ++|.+.+......+.++|.|+|++||||+++||..
T Consensus        59 ~~~~~~~~~~NHsc~pN~~~~~~~~~~~~~~~A~rdI~~GeElt~~Y~~~  108 (119)
T 1n3j_A           59 AMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDD  108 (119)
T ss_dssp             EEESSSHHHHHSCSSCCCEEEECSSSSCEEEEECSCBCSSEEECCCCCCC
T ss_pred             ccccCceeeeccCCCCCeeEEEECCCeEEEEEEccccCCCCEEEEecCch
Confidence            45678888999964 45665555445689999999999999999999973


No 8  
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=96.41  E-value=0.003  Score=57.74  Aligned_cols=45  Identities=20%  Similarity=0.369  Sum_probs=32.8

Q ss_pred             cccCCC-cccceeEeeeC--CeEEEEEcccCCCCCeEEeecCCCChHH
Q 008853          329 PLLAYS-SKCKAMLAAVD--DAVQLVVDRPYKAGESIVVWCGPQPNSK  373 (551)
Q Consensus       329 mlNh~~-~~~~a~~~~~~--~~~~l~a~r~i~~GeEvfi~YG~~sN~~  373 (551)
                      ++||++ ++|.+.....+  ..+.+.|.|+|++||||+++||......
T Consensus       110 fiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~  157 (166)
T 3f9x_A          110 LINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSKAS  157 (166)
T ss_dssp             GCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCHHH
T ss_pred             eeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChhhH
Confidence            579965 45555433333  3688999999999999999999865443


No 9  
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=96.06  E-value=0.0032  Score=61.44  Aligned_cols=42  Identities=14%  Similarity=0.155  Sum_probs=32.2

Q ss_pred             CccccCCCcccceeEe-eeCCeEEEEEcccCCCCCeEEeecCCC
Q 008853          327 GPPLLAYSSKCKAMLA-AVDDAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       327 ~DmlNh~~~~~~a~~~-~~~~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      +-++||++. .|+.+. ..++.+.++|.|+|++||||+++||..
T Consensus       177 ar~iNHSC~-PN~~~~~~~~~~i~v~A~rdI~~GEElt~~Y~~~  219 (247)
T 3rq4_A          177 AAFINHDCK-PNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEG  219 (247)
T ss_dssp             GGGCEECSS-CSEEEEEETTTEEEEEESSCBCTTCBCEECCCTT
T ss_pred             hhhcCCCCC-CCEEEEEeCCCEEEEEECCcCCCCCEEEEecCch
Confidence            668899652 233332 245789999999999999999999975


No 10 
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=95.45  E-value=0.014  Score=54.85  Aligned_cols=43  Identities=12%  Similarity=0.117  Sum_probs=30.2

Q ss_pred             CccccCCC-cccceeEeeeC--CeEEEEEcccCCCCCeEEeecCCC
Q 008853          327 GPPLLAYS-SKCKAMLAAVD--DAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       327 ~DmlNh~~-~~~~a~~~~~~--~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      +-++||++ ++|.+.....+  ..+.+.|.|+|++||||+++||..
T Consensus       125 arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~  170 (192)
T 2w5y_A          125 ARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFP  170 (192)
T ss_dssp             GGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-
T ss_pred             hHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCc
Confidence            34589965 34443322223  378899999999999999999974


No 11 
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=95.45  E-value=0.011  Score=58.34  Aligned_cols=43  Identities=19%  Similarity=0.211  Sum_probs=32.2

Q ss_pred             cCccccCCC-cccceeEeeeCCeEEEEEcccCCCCCeEEeecCCC
Q 008853          326 LGPPLLAYS-SKCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       326 ~~DmlNh~~-~~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      .+-++||++ ++|.+.+ .....+.++|.|+|++||||+++||..
T Consensus       205 ~arfiNHSC~PN~~~~~-~~~~~i~i~A~RdI~~GEELt~~Y~~~  248 (273)
T 3s8p_A          205 PAAFINHDCRPNCKFVS-TGRDTACVKALRDIEPGEEISCYYGDG  248 (273)
T ss_dssp             GGGGCEECSSCSEEEEE-EETTEEEEEESSCBCTTCBCEECCCTT
T ss_pred             hHHhhCCCCCCCeEEEE-cCCCEEEEEECceeCCCCEEEEecCch
Confidence            345789965 3444332 334589999999999999999999964


No 12 
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=94.68  E-value=0.023  Score=54.60  Aligned_cols=41  Identities=12%  Similarity=0.071  Sum_probs=29.2

Q ss_pred             cccCCC-cccceeEeeeC--CeEEEEEcccCCCCCeEEeecCCC
Q 008853          329 PLLAYS-SKCKAMLAAVD--DAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       329 mlNh~~-~~~~a~~~~~~--~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      ++||+. +++.+.....+  ..+.+.|.|+|++||||+++||..
T Consensus       149 fiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~  192 (222)
T 3ope_A          149 FINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFH  192 (222)
T ss_dssp             GCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSS
T ss_pred             eeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCc
Confidence            479864 34433322223  368899999999999999999963


No 13 
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=94.64  E-value=0.021  Score=56.30  Aligned_cols=40  Identities=15%  Similarity=0.028  Sum_probs=28.5

Q ss_pred             cccCCC-cccceeEeeeC--Ce-EEEEEcccCCCCCeEEeecCC
Q 008853          329 PLLAYS-SKCKAMLAAVD--DA-VQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       329 mlNh~~-~~~~a~~~~~~--~~-~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      ++||++ ++|.+......  +. +.+.|.|+|++||||+++||.
T Consensus       189 fiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~  232 (261)
T 2f69_A          189 KANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGY  232 (261)
T ss_dssp             GCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCC
T ss_pred             eEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCC
Confidence            579964 45554432221  23 489999999999999999995


No 14 
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=94.37  E-value=0.029  Score=55.79  Aligned_cols=40  Identities=10%  Similarity=0.057  Sum_probs=29.4

Q ss_pred             cccCCC-cccceeEeeeC--CeEEEEEcccCCCCCeEEeecCC
Q 008853          329 PLLAYS-SKCKAMLAAVD--DAVQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       329 mlNh~~-~~~~a~~~~~~--~~~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      ++||+. ++|.+.....+  ..+.|.|.|+|++||||+++||.
T Consensus       193 FiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~  235 (278)
T 3h6l_A          193 FMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQF  235 (278)
T ss_dssp             GCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTT
T ss_pred             hcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCC
Confidence            579964 44544332233  36788999999999999999986


No 15 
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=94.16  E-value=0.035  Score=53.68  Aligned_cols=41  Identities=17%  Similarity=0.165  Sum_probs=29.4

Q ss_pred             cccCCC-cccceeE-ee-eCCeEEEEEcccCCCCCeEEeecCCC
Q 008853          329 PLLAYS-SKCKAML-AA-VDDAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       329 mlNh~~-~~~~a~~-~~-~~~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      ++||+. +++.+.. .. ....+.+.|.|+|++||||+++||..
T Consensus       168 fiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~  211 (232)
T 3ooi_A          168 FMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLE  211 (232)
T ss_dssp             GCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTC
T ss_pred             cccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCC
Confidence            579864 3444322 22 23578899999999999999999963


No 16 
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=93.97  E-value=0.052  Score=48.72  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=32.4

Q ss_pred             ccccCCCcc--cceeEeeeCCeEEEEEcccCCCCCeEEeecCCCCh
Q 008853          328 PPLLAYSSK--CKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQPN  371 (551)
Q Consensus       328 DmlNh~~~~--~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~sN  371 (551)
                      -++||.+..  .|......++.+.+.|.|+|++||||+..||...+
T Consensus       101 RfINhSc~p~eqNl~~~~~~~~I~~~A~RdI~~GEEL~~dY~~~~~  146 (149)
T 2qpw_A          101 RYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDN  146 (149)
T ss_dssp             GGCEECBTTBTCCEEEEEETTEEEEEESSCBCTTCBCEECCCCCCC
T ss_pred             eeeeccCChhhcCEEEEEECCEEEEEEccCCCCCCEEEEccCCccC
Confidence            357985422  23333345689999999999999999999998543


No 17 
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=93.13  E-value=0.051  Score=54.31  Aligned_cols=40  Identities=15%  Similarity=0.032  Sum_probs=28.6

Q ss_pred             cccCCC-cccceeEeee-C-Ce-EEEEEcccCCCCCeEEeecCC
Q 008853          329 PLLAYS-SKCKAMLAAV-D-DA-VQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       329 mlNh~~-~~~~a~~~~~-~-~~-~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      ++||++ ++|.+..... . +. +.+.|.|+|++||||+++||-
T Consensus       243 ~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~  286 (293)
T 1h3i_A          243 KANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGY  286 (293)
T ss_dssp             GSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEET
T ss_pred             eeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCC
Confidence            479954 4555443212 1 33 589999999999999999985


No 18 
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=92.70  E-value=0.097  Score=52.26  Aligned_cols=40  Identities=8%  Similarity=-0.083  Sum_probs=29.1

Q ss_pred             cccCCC-ccccee-Eeee--CCeEEEEEcccCCCCCeEEeecCC
Q 008853          329 PLLAYS-SKCKAM-LAAV--DDAVQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       329 mlNh~~-~~~~a~-~~~~--~~~~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      ++||.. +++.+. +..+  ...+.+.|.|+|++||||+++||.
T Consensus       208 fiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~  251 (290)
T 3bo5_A          208 FLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSG  251 (290)
T ss_dssp             GCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTS
T ss_pred             eeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCC
Confidence            579864 333332 2222  257899999999999999999995


No 19 
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=92.60  E-value=0.082  Score=52.72  Aligned_cols=23  Identities=22%  Similarity=0.268  Sum_probs=21.3

Q ss_pred             CeEEEEEcccCCCCCeEEeecCC
Q 008853          346 DAVQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       346 ~~~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      ..+.+.|.|+|++||||+++||.
T Consensus       243 ~~i~~~A~RdI~~GEELT~dYg~  265 (287)
T 3hna_A          243 PRIAFFSTRLIEAGEQLGFDYGE  265 (287)
T ss_dssp             CEEEEEESSCBCTTCBCEECCCH
T ss_pred             eeEEEEEcceeCCCCeEEEeCCC
Confidence            38999999999999999999995


No 20 
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=92.28  E-value=0.12  Score=52.02  Aligned_cols=40  Identities=8%  Similarity=-0.031  Sum_probs=28.4

Q ss_pred             cccCCC-cccceeEeeeC------CeEEEEEcccCCCCCeEEeecCC
Q 008853          329 PLLAYS-SKCKAMLAAVD------DAVQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       329 mlNh~~-~~~~a~~~~~~------~~~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      ++||+. +++.+.....+      ..+.+.|.|+|++||||+++||.
T Consensus       223 fiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~  269 (302)
T 1ml9_A          223 FINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVN  269 (302)
T ss_dssp             GCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC
T ss_pred             hcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECC
Confidence            589864 34433221111      36899999999999999999985


No 21 
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=91.61  E-value=0.17  Score=45.46  Aligned_cols=41  Identities=2%  Similarity=0.043  Sum_probs=29.8

Q ss_pred             cccCCCc--ccceeEeeeCCeEEEEEcccCCCCCeEEeecCCC
Q 008853          329 PLLAYSS--KCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       329 mlNh~~~--~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      ++||...  ..|......++.+.++|.|+|++|||+++.||+.
T Consensus       100 ~Vn~A~~~~eqNl~a~q~~~~I~~~a~rdI~pGeELlv~Yg~~  142 (151)
T 3db5_A          100 FVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRD  142 (151)
T ss_dssp             GCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC-
T ss_pred             EEEecCCcccCceEEEEECCEEEEEEccccCCCCEEEEecCHH
Confidence            4676442  2343333346899999999999999999999973


No 22 
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=91.40  E-value=0.18  Score=46.24  Aligned_cols=41  Identities=7%  Similarity=0.170  Sum_probs=29.9

Q ss_pred             cccCCCc--ccceeEeeeCCeEEEEEcccCCCCCeEEeecCCC
Q 008853          329 PLLAYSS--KCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       329 mlNh~~~--~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      ++||...  ..|......++.+.++|.|+|++|+|+++.||+.
T Consensus       104 ~Vn~A~~~~eqNl~a~q~~~~I~~~a~RdI~pGeELlvwYg~~  146 (170)
T 3ep0_A          104 YIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNS  146 (170)
T ss_dssp             GCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC-
T ss_pred             eEEecCCcccCCeeeEEECCEEEEEECcCcCCCCEEEEeeCHH
Confidence            3576443  2343333456899999999999999999999984


No 23 
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=91.16  E-value=0.17  Score=50.68  Aligned_cols=42  Identities=12%  Similarity=0.032  Sum_probs=29.7

Q ss_pred             ccccCCC-ccccee-Eeee-----CCeEEEEEcccCCCCCeEEeecCCC
Q 008853          328 PPLLAYS-SKCKAM-LAAV-----DDAVQLVVDRPYKAGESIVVWCGPQ  369 (551)
Q Consensus       328 DmlNh~~-~~~~a~-~~~~-----~~~~~l~a~r~i~~GeEvfi~YG~~  369 (551)
                      -++||+. +++.+. +..+     ...+.+.|.|+|++||||+++||..
T Consensus       217 RfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~  265 (300)
T 2r3a_A          217 HFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMK  265 (300)
T ss_dssp             GGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGS
T ss_pred             HheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCC
Confidence            4689964 333332 1111     2478999999999999999999964


No 24 
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=91.09  E-value=0.16  Score=50.85  Aligned_cols=41  Identities=2%  Similarity=-0.174  Sum_probs=29.0

Q ss_pred             ccccCCC-ccccee-Eeee-----CCeEEEEEcccCCCCCeEEeecCC
Q 008853          328 PPLLAYS-SKCKAM-LAAV-----DDAVQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       328 DmlNh~~-~~~~a~-~~~~-----~~~~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      -++||.. +++.+. +..+     ...+.+.|.|+|++||||+++||.
T Consensus       215 RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~  262 (299)
T 1mvh_A          215 RFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAG  262 (299)
T ss_dssp             GGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCT
T ss_pred             heEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCC
Confidence            3589964 344322 1111     247899999999999999999986


No 25 
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=90.01  E-value=0.39  Score=44.95  Aligned_cols=50  Identities=10%  Similarity=0.115  Sum_probs=35.9

Q ss_pred             cccCCCc--ccceeEeeeCCeEEEEEcccCCCCCeEEeecCCCChHHHHHhcCccc
Q 008853          329 PLLAYSS--KCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGPQPNSKLLINYGFVD  382 (551)
Q Consensus       329 mlNh~~~--~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~~sN~~LL~~YGFv~  382 (551)
                      ++||...  ..|......++.+.++|.|+|++|||+++.||    .++..++|+-.
T Consensus       134 fVn~A~~~~eqNl~a~q~~~~I~y~a~RdI~pGeELlvwYg----~~Y~~~lg~p~  185 (196)
T 3dal_A          134 YVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYC----RDFAERLHYPY  185 (196)
T ss_dssp             GCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEEC----HHHHHHTTCCC
T ss_pred             eEEecCCcccCCcEEEEECCEEEEEECcccCCCCEEEEecC----HHHHHHcCCCC
Confidence            4676443  23333233468999999999999999999999    46677777643


No 26 
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=86.21  E-value=0.62  Score=42.05  Aligned_cols=47  Identities=15%  Similarity=0.088  Sum_probs=33.2

Q ss_pred             hhHHHHHHHHCCCCCCCcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCcc
Q 008853           78 LGDLKSWMHKNGLPPCKVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPNS  131 (551)
Q Consensus        78 ~~~l~~Wl~~~G~~~~~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~~  131 (551)
                      ...-+..+.++|... .+++...+.   .|+   ||+|+++|++|+.|+...=.
T Consensus        16 ~~~~~~~~~q~g~~~-~l~v~~~~~---kG~---Gl~A~~~I~~G~~I~ey~Ge   62 (166)
T 3f9x_A           16 ERKRIDELIESGKEE-GMKIDLIDG---KGR---GVIATKQFSRGDFVVEYHGD   62 (166)
T ss_dssp             HHHHHHHHHHHTCCT-TEEEEEETT---TEE---EEEESSCBCTTCEEEECCSE
T ss_pred             HHHHHHHHHHcCCcc-CeEEEECCC---cee---EEEECCCcCCCCEEEEeece
Confidence            344455566677655 588888753   353   69999999999999865433


No 27 
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=82.27  E-value=1.1  Score=40.19  Aligned_cols=39  Identities=8%  Similarity=0.119  Sum_probs=28.9

Q ss_pred             ccCCCc--ccceeEeeeCCeEEEEEcccCCCCCeEEeecCC
Q 008853          330 LLAYSS--KCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       330 lNh~~~--~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      +||...  ..|......++.+.+.+.++|++|+|+++.||.
T Consensus       100 vn~a~~~~eqNl~a~q~~~~I~~~~~r~I~pGeELlv~Y~~  140 (152)
T 3ihx_A          100 VRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAA  140 (152)
T ss_dssp             CCBCCSTTTCCEEEEECSSSEEEEESSCBCTTCBCCEEECH
T ss_pred             eeccCCccCCCcEEEEeCCeEEEEEeeecCCCCEEEEechH
Confidence            565432  234333345688999999999999999999996


No 28 
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=80.41  E-value=1.5  Score=42.17  Aligned_cols=40  Identities=13%  Similarity=0.212  Sum_probs=29.8

Q ss_pred             cccCCCc--ccceeEeeeCCeEEEEEcccCCCCCeEEeecCC
Q 008853          329 PLLAYSS--KCKAMLAAVDDAVQLVVDRPYKAGESIVVWCGP  368 (551)
Q Consensus       329 mlNh~~~--~~~a~~~~~~~~~~l~a~r~i~~GeEvfi~YG~  368 (551)
                      ++||...  ..|......++.+.++|.|+|.+|+|+++.||.
T Consensus       143 fVn~Ar~~~EqNL~A~q~~~~Iyy~a~RdI~pGeELlVwYg~  184 (237)
T 3ray_A          143 YVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSE  184 (237)
T ss_dssp             GCEECCCTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECH
T ss_pred             EEEcCCCcccccceeEEeCCEEEEEEccccCCCCEEEEeeCH
Confidence            4676432  234333345689999999999999999999996


No 29 
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=75.76  E-value=1.3  Score=37.62  Aligned_cols=30  Identities=23%  Similarity=0.269  Sum_probs=23.1

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVP  129 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP  129 (551)
                      +++++..+.   .|+   ||+|+++|++|+.|+.-|
T Consensus         5 ~~~v~~s~~---~G~---GvfA~~~I~~G~~I~ey~   34 (119)
T 1n3j_A            5 RVIVKKSPL---GGY---GVFARKSFEKGELVEECL   34 (119)
T ss_dssp             SEEEECSCS---SCC---EEEECCCBCSCEEECCCC
T ss_pred             CEEEEECCC---cee---EEEECCcCCCCCEEEEee
Confidence            577777543   354   599999999999998655


No 30 
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=71.31  E-value=3.5  Score=39.13  Aligned_cols=37  Identities=14%  Similarity=-0.079  Sum_probs=25.9

Q ss_pred             CCCCCCcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCcc
Q 008853           89 GLPPCKVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPNS  131 (551)
Q Consensus        89 G~~~~~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~~  131 (551)
                      |.....+++...+.   .|   +||+|+++|++|+.|.+..=.
T Consensus        70 ~~~~~~lev~~t~~---kG---~Gl~A~~~I~~G~~I~ey~Ge  106 (222)
T 3ope_A           70 HEWVQCLERFRAEE---KG---WGIRTKEPLKAGQFIIEYLGE  106 (222)
T ss_dssp             TCCCSCCEEEECTT---SS---EEEECSSCBCTTCEEEECCSE
T ss_pred             CCccccEEEEEcCC---Cc---eEEEECceECCCCEEEEecce
Confidence            43334588877642   34   469999999999999876443


No 31 
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=66.06  E-value=4.7  Score=38.50  Aligned_cols=30  Identities=10%  Similarity=0.091  Sum_probs=22.9

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVP  129 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP  129 (551)
                      ++++...+.   .|   +||+|+++|++|+.|....
T Consensus        93 ~lev~~t~~---kG---~Gl~A~~~I~~G~~I~ey~  122 (232)
T 3ooi_A           93 EVEIFRTLQ---RG---WGLRTKTDIKKGEFVNEYV  122 (232)
T ss_dssp             CEEEEECSS---SS---EEEEESSCBCTTCEEEECC
T ss_pred             cEEEEEcCC---ce---eEEEECceecCCceeeEee
Confidence            588877642   34   4699999999999997643


No 32 
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=65.05  E-value=5.6  Score=38.99  Aligned_cols=35  Identities=6%  Similarity=-0.009  Sum_probs=24.9

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVP  129 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP  129 (551)
                      +++|..+......+.| +||+|+++|++||.|.+..
T Consensus       132 gfeV~~~~ry~~e~~G-~GlfA~~~I~kGe~I~EY~  166 (273)
T 3s8p_A          132 GFEILPCNRYSSEQNG-AKIVATKEWKRNDKIELLV  166 (273)
T ss_dssp             CEEEEEECCCTTCSSE-EEEEESSCBCTTCEEEEEE
T ss_pred             CceEEeccceeecCCC-ceEEECCccCCCCEEEEEE
Confidence            7888876432223444 5799999999999998644


No 33 
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=62.06  E-value=7  Score=37.75  Aligned_cols=38  Identities=0%  Similarity=-0.048  Sum_probs=26.3

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCccC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPNSL  132 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~~~  132 (551)
                      +++|..+.-....|.| +||+|+++|++||.|....=.+
T Consensus       104 g~eV~~~~Ry~~~~~G-~Gv~A~~~I~kGE~I~ey~Gel  141 (247)
T 3rq4_A          104 GFTILPCTRYSMETNG-AKIVSTRAWKKNEKLELLVGCI  141 (247)
T ss_dssp             CEEEEECCCCTTCSSC-EEEEESSCBCTTCEEEEEEEEE
T ss_pred             CcEEEeeeeeeecCCc-ceEEeCCccCCCCEEEEEEeEE
Confidence            6888775322122444 4699999999999998875443


No 34 
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=61.32  E-value=7.7  Score=38.12  Aligned_cols=31  Identities=16%  Similarity=0.088  Sum_probs=23.3

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCc
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPN  130 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~  130 (551)
                      .+++..++   +.|   +||+|+++|++|+.|.+..=
T Consensus       118 ~leV~~t~---~kG---~Gl~A~~~I~~G~~I~EY~G  148 (278)
T 3h6l_A          118 DVEVILTE---KKG---WGLRAAKDLPSNTFVLEYCG  148 (278)
T ss_dssp             CEEEEECS---SSC---EEEEESSCBCTTCEEEECCC
T ss_pred             CEEEEEcC---CCc---eEEEeCCccCCCCEeEEeee
Confidence            57787754   234   46999999999999987543


No 35 
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=59.20  E-value=8.3  Score=38.07  Aligned_cols=30  Identities=13%  Similarity=0.127  Sum_probs=22.3

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVP  129 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP  129 (551)
                      ++++...+   ++|   +||+|+++|++|+.|.+..
T Consensus       148 ~l~v~~t~---~kG---~Gv~A~~~I~~G~~I~eY~  177 (287)
T 3hna_A          148 RLQLYRTR---DMG---WGVRSLQDIPPGTFVCEYV  177 (287)
T ss_dssp             CEEEEECS---SSS---EEEEESSCBCTTCEEEEEC
T ss_pred             cEEEEEcC---CCc---eEEEeCcccCCCCEEEEee
Confidence            57776654   234   4699999999999998643


No 36 
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=57.14  E-value=8.6  Score=37.84  Aligned_cols=32  Identities=6%  Similarity=-0.081  Sum_probs=23.8

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVP  129 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP  129 (551)
                      .+.++..+..   |.| +||+|+++|++|+.|++-.
T Consensus       164 ~~~v~~S~i~---GkG-~Gvfa~~~I~~G~~I~ey~  195 (293)
T 1h3i_A          164 RVYVAESLIS---SAG-EGLFSKVAVGPNTVMSFYN  195 (293)
T ss_dssp             TEEEEECSSS---SSS-EEEEESSCBCTTCEEEEEC
T ss_pred             eEEEeeeecC---CCc-ceEEECCcCCCCCEEEEec
Confidence            5777776543   444 4699999999999997643


No 37 
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=54.20  E-value=11  Score=36.72  Aligned_cols=32  Identities=6%  Similarity=-0.072  Sum_probs=23.4

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVP  129 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP  129 (551)
                      .+.++..+-. ++|   +||+|+++|++|+.|++-.
T Consensus       110 ~~~v~~S~i~-~kG---~GvfA~~~I~~G~~I~eY~  141 (261)
T 2f69_A          110 RVYVAESLIS-SAG---EGLFSKVAVGPNTVMSFYN  141 (261)
T ss_dssp             TEEEEECSST-TCC---EEEEESSCBCTTCEEEEEC
T ss_pred             eEEEEecCCC-CCc---eEEEECcccCCCCEEEEEe
Confidence            5777776542 234   4699999999999998643


No 38 
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=53.94  E-value=11  Score=37.11  Aligned_cols=30  Identities=10%  Similarity=-0.004  Sum_probs=22.3

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVP  129 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP  129 (551)
                      ++++..++   +.|   +||+|+++|++|+.|.+.-
T Consensus       127 ~l~V~~s~---~~G---~Gl~A~~~I~~G~~I~EY~  156 (290)
T 3bo5_A          127 HFQVFKTH---KKG---WGLRTLEFIPKGRFVCEYA  156 (290)
T ss_dssp             CEEEEECS---SSS---EEEEESSCBCTTCEEEECC
T ss_pred             cEEEEEcC---CCc---ceEeECCccCCCCEEEEEe
Confidence            47776653   234   4699999999999998754


No 39 
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=48.54  E-value=15  Score=36.30  Aligned_cols=30  Identities=17%  Similarity=-0.042  Sum_probs=22.2

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcC
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVP  129 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP  129 (551)
                      ++++...+   +.|   +||+|+++|++|+.|.+..
T Consensus       138 ~l~v~~t~---~~G---~Gv~A~~~I~kG~~I~EY~  167 (299)
T 1mvh_A          138 PLEIFKTK---EKG---WGVRSLRFAPAGTFITCYL  167 (299)
T ss_dssp             CEEEEECS---SSS---EEEEESSCBCTTCEEEECC
T ss_pred             cEEEEEcC---CCc---ceEeeCceeCCCCEEEEee
Confidence            46666543   234   4699999999999998854


No 40 
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=47.91  E-value=16  Score=36.15  Aligned_cols=21  Identities=5%  Similarity=-0.103  Sum_probs=17.7

Q ss_pred             eEEEEccCCCCCCeEEEcCcc
Q 008853          111 HYVAASEDLQAGDAAFSVPNS  131 (551)
Q Consensus       111 ~Gv~At~dI~~ge~ll~IP~~  131 (551)
                      +||+|+++|++|+.|.+-.=.
T Consensus       153 ~Gl~A~~~I~~G~~I~EY~Ge  173 (300)
T 2r3a_A          153 WGVKTLVKIKRMSFVMEYVGE  173 (300)
T ss_dssp             EEEEESSCBCTTCEEEEECCE
T ss_pred             EEEEeCccccCCCEeEEEeeE
Confidence            469999999999999886533


No 41 
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=44.24  E-value=14  Score=34.16  Aligned_cols=32  Identities=13%  Similarity=0.205  Sum_probs=24.0

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCcc
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPNS  131 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~~  131 (551)
                      .|++...+.   .|   +||+|+++|++|+.|.+..=.
T Consensus        53 ~l~V~~s~~---~G---~GlfA~~~I~~G~~I~EY~Ge   84 (192)
T 2w5y_A           53 AVGVYRSPI---HG---RGLFCKRNIDAGEMVIEYAGN   84 (192)
T ss_dssp             HEEEEECSS---SS---EEEEESSCBCTTCEEEECCSE
T ss_pred             cEEEEEcCC---ce---eEEEECcccCCCCEEEEeeee
Confidence            577776542   35   469999999999999986543


No 42 
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=33.57  E-value=26  Score=30.83  Aligned_cols=31  Identities=16%  Similarity=0.016  Sum_probs=22.0

Q ss_pred             CCcEEeecCCCCCCCCceeEEEEccCCCCCCeEEE
Q 008853           93 CKVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFS  127 (551)
Q Consensus        93 ~~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~  127 (551)
                      ..+.++...- .+.|   +||+|+++|++|+.+..
T Consensus        29 ~~l~l~~S~i-~~~G---~GVfA~~~I~kG~~~ge   59 (149)
T 2qpw_A           29 EEVRLFPSAV-DKTR---IGVWATKPILKGKKFGP   59 (149)
T ss_dssp             TTEEEEECSS-CTTS---EEEEESSCBCTTCEECC
T ss_pred             CCeEEEEcCC-CCCc---eEEEECCccCCCCEEEE
Confidence            3688887543 2234   36999999999998633


No 43 
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=28.29  E-value=39  Score=30.50  Aligned_cols=32  Identities=13%  Similarity=0.088  Sum_probs=23.5

Q ss_pred             CCcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEc
Q 008853           93 CKVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSV  128 (551)
Q Consensus        93 ~~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~I  128 (551)
                      .++.|+...-. +.|.   ||+|+++|++|+.+...
T Consensus        27 ~~l~l~~S~i~-~~G~---GVfA~~~IpkGt~fGpY   58 (170)
T 3ep0_A           27 AEVIIAQSSIP-GEGL---GIFSKTWIKAGTEMGPF   58 (170)
T ss_dssp             TTEEEEECSSS-SCSE---EEEESSCBCTTCEEEEE
T ss_pred             CCeEEEEcCCC-CCce---EEEECcccCCCCEEEec
Confidence            37899886542 3454   59999999999987544


No 44 
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=26.90  E-value=39  Score=33.37  Aligned_cols=31  Identities=6%  Similarity=0.039  Sum_probs=22.6

Q ss_pred             CcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCc
Q 008853           94 KVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPN  130 (551)
Q Consensus        94 ~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~  130 (551)
                      ++++..++   ++|   +||+|+++|++|+.|.+.-=
T Consensus       134 ~l~v~~t~---~kG---~Gv~A~~~I~~G~~I~EY~G  164 (302)
T 1ml9_A          134 PLQIFRTK---DRG---WGVKCPVNIKRGQFVDRYLG  164 (302)
T ss_dssp             CEEEEECS---SSC---EEEECSSCBCTTCEEEECCC
T ss_pred             ceEEEEcC---CCc---eEEEECCeeCCCCEEEEEee
Confidence            46666543   234   46999999999999988643


No 45 
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=21.45  E-value=55  Score=28.73  Aligned_cols=31  Identities=10%  Similarity=0.024  Sum_probs=20.9

Q ss_pred             CCcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEc
Q 008853           93 CKVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSV  128 (551)
Q Consensus        93 ~~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~I  128 (551)
                      .+++|+... . +.|.   ||+|++.|++|+.+--.
T Consensus        23 ~~l~l~~S~-~-~~g~---GVfa~~~Ip~G~~fGPy   53 (151)
T 3db5_A           23 KQLVLRQSI-V-GAEV---GVWTGETIPVRTCFGPL   53 (151)
T ss_dssp             TTEEEEECC-----CE---EEEESSCBCTTCEECCC
T ss_pred             CCeEEEEcc-C-CCce---EEEEecccCCCCEEEEe
Confidence            378888752 2 3454   59999999999886433


No 46 
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=21.39  E-value=63  Score=26.97  Aligned_cols=57  Identities=16%  Similarity=0.297  Sum_probs=39.3

Q ss_pred             cccccchhHHHHHHHHCCCCCCCcEEeecCCCCCCCCceeEEEEccCCCCCCeEEEcCccCccchh
Q 008853           72 SKKEEDLGDLKSWMHKNGLPPCKVILKEKPSHNEKHRPIHYVAASEDLQAGDAAFSVPNSLVVTLE  137 (551)
Q Consensus        72 ~~~~~~~~~l~~Wl~~~G~~~~~v~i~~~~~~~~~GrG~~Gv~At~dI~~ge~ll~IP~~~~lt~~  137 (551)
                      +.+---+.++.+|+.+||...+ +-+... .   .|  .  .+..+=++.|++++.|-.+++-+..
T Consensus         7 s~rPYLiRA~yeWi~DN~~TP~-l~Vda~-~---~~--v--~VP~~~v~dGqIvLNIsp~Av~~L~   63 (111)
T 1ou8_A            7 PKRPYLLRAYYDWLVDNSFTPY-LVVDAT-Y---LG--V--NVPVEYVKDGQIVLNLSASATGNLQ   63 (111)
T ss_dssp             CSHHHHHHHHHHHHHHTTCCEE-EEEETT-S---TT--C--BCCGGGCBTTEEEEECSTTTCEEEE
T ss_pred             CCccHHHHHHHHHHHhCCCcce-EEEEcC-C---CC--C--cCCHHHhcCCEEEEECChhhhcCeE
Confidence            4444568899999999999875 433332 1   12  1  3567778889999999888765543


No 47 
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.13  E-value=35  Score=26.60  Aligned_cols=14  Identities=21%  Similarity=0.238  Sum_probs=12.4

Q ss_pred             EEEEccCCCCCCeE
Q 008853          112 YVAASEDLQAGDAA  125 (551)
Q Consensus       112 Gv~At~dI~~ge~l  125 (551)
                      .|+|.++|++|++|
T Consensus         8 slvA~rdI~~Gevi   21 (79)
T 1wvo_A            8 SVVAKVKIPEGTIL   21 (79)
T ss_dssp             EEEESSCBCTTCBC
T ss_pred             EEEEeCccCCCCCc
Confidence            59999999999865


Done!