BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008855
(551 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WU9|C3H64_ARATH Zinc finger CCCH domain-containing protein 64 OS=Arabidopsis
thaliana GN=At5g56900 PE=2 SV=1
Length = 596
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/552 (69%), Positives = 451/552 (81%), Gaps = 9/552 (1%)
Query: 1 MNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF 60
++YVEGR+++PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F
Sbjct: 53 LDYVEGRAQVPIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKF 112
Query: 61 TLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAA 120
+LHGLSVAYLSGRQSSE Q FG YSQDDVDALRALAEEPG VDLFLTNEWP+GVTN+AA
Sbjct: 113 SLHGLSVAYLSGRQSSESQ-FGKYSQDDVDALRALAEEPGGVDLFLTNEWPAGVTNRAAV 171
Query: 121 SDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 180
SD+ VGISDSS +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA V
Sbjct: 172 SDIPVGISDSSCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQV 231
Query: 181 GNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDS 240
GNK KQKF+HALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDS
Sbjct: 232 GNKNKQKFLHALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDS 288
Query: 241 QYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFII 300
QYWRYDV KRQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD II
Sbjct: 289 QYWRYDVP-KRQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLII 346
Query: 301 KGKCEKGPECSYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYY 359
KGKCEKGPECSYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +
Sbjct: 347 KGKCEKGPECSYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESF 404
Query: 360 YCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWL 419
YCALPKG LVEDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +
Sbjct: 405 YCALPKGSLVEDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELV 464
Query: 420 SKRGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNC 479
SKR +HANLQ VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++
Sbjct: 465 SKRVSHANLQVVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAAL 524
Query: 480 SFFYVELPEGTVLSHLIEENERFPAQFGREVLAGLLNIADKADWRNCMLGKEEETKMVED 539
FYVELP+GTVLSH +EENE FPAQFGREVLAGLL I D+ADWRNC + +EEE K+ ED
Sbjct: 525 GLFYVELPDGTVLSHTLEENEVFPAQFGREVLAGLLKIPDRADWRNCKISQEEEAKLAED 584
Query: 540 FKKRFEAFDPNQ 551
FKK+F+ FDP Q
Sbjct: 585 FKKQFQEFDPCQ 596
>sp|Q69NK8|C3H59_ORYSJ Zinc finger CCCH domain-containing protein 59 OS=Oryza sativa
subsp. japonica GN=Os09g0364000 PE=2 SV=1
Length = 613
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/551 (59%), Positives = 411/551 (74%), Gaps = 8/551 (1%)
Query: 2 NYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT 61
+Y+EGR+ +PIPTYF GDYG A ++L A+ S+ +GF G ++ NLFWL+GS FT
Sbjct: 70 DYLEGRAAVPIPTYFTGDYGPAAPRLLAKAA--SSARGFSPGGIQICPNLFWLRGSARFT 127
Query: 62 LHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAAS 121
LHGLSV YLSGR+ G G YSQDDVDALRALAEEPGIVDLFLTNEWP+GV N S
Sbjct: 128 LHGLSVVYLSGRKGPGGP--GCYSQDDVDALRALAEEPGIVDLFLTNEWPAGVVNGVDTS 185
Query: 122 DMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVG 181
+ ISD D V+ELVAEIKPRYHIAGSKGVFYAREPY + A HVTRF+GLA VG
Sbjct: 186 NAPSQISDPHGYDPVVAELVAEIKPRYHIAGSKGVFYAREPYVSDSAAHVTRFIGLANVG 245
Query: 182 NKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQ 241
NKEKQKFIHA+SPTPA+TMS+ DI + PNTTLSPY + +E KRP++ +D Q
Sbjct: 246 NKEKQKFIHAISPTPASTMSSVDIHARPPNTTLSPYISPAKSVPVEETPKRPAED-ADLQ 304
Query: 242 YWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIK 301
YWRYDV K+Q+HG G+++CFKF SGSCPRG KCN+RHD +ARE R VC DF+ K
Sbjct: 305 YWRYDV--KKQRHGEAGGNRLCFKFTSSGSCPRGSKCNYRHDEEAREHYNRNVCFDFLNK 362
Query: 302 GKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYC 361
GKCEKGPEC + HSL ++ + R + + CWFCLSSP VESHL++S+GE YYC
Sbjct: 363 GKCEKGPECRFAHSLSDEGAVRDTKPRSERRRVESSCWFCLSSPDVESHLVISIGEGYYC 422
Query: 362 ALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSK 421
AL KGPLV +HVLVIPVEH +T+ E E ELGR++++L Y++ QGK A++FEW+S+
Sbjct: 423 ALAKGPLVPNHVLVIPVEHCSSTLKMPVEAEAELGRYKDALAKYFEKQGKIAIYFEWVSQ 482
Query: 422 RGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKF-LATKSSKSSDGRRSLRAQFDRNCS 480
+ HANLQAVP+P SKA++V+ IF+LAA++LGF+F + ++ R LR++ D S
Sbjct: 483 QSRHANLQAVPVPLSKASSVKKIFHLAAQRLGFEFSVVNPDGDANRARELLRSECDSKSS 542
Query: 481 FFYVELPEGTVLSHLIEENERFPAQFGREVLAGLLNIADKADWRNCMLGKEEETKMVEDF 540
FYVELPEG+VL HL++ NE+FPAQFGREVLAGLL++AD+ADWRNC + KEEE +MV+DF
Sbjct: 543 LFYVELPEGSVLLHLVDSNEKFPAQFGREVLAGLLSMADRADWRNCKVSKEEEIQMVDDF 602
Query: 541 KKRFEAFDPNQ 551
K+ F FDP +
Sbjct: 603 KQGFREFDPAE 613
>sp|Q8AVL0|C19L1_XENLA CWF19-like protein 1 OS=Xenopus laevis GN=cwf19l1 PE=2 SV=1
Length = 540
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 175/562 (31%), Positives = 270/562 (48%), Gaps = 100/562 (17%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFK-MDGFKVTDNLFWLKGSGNFT 61
Y G + PI TY +G A+ + FK +DG ++ N+ +L G FT
Sbjct: 58 YKSGAKKAPIQTYVLG------------ANNQETVKHFKDVDGCELAANITYLGRKGLFT 105
Query: 62 -LHGLSVAYLSG-RQSSEGQQFGTYSQDDVDALR-ALAEEPGI--VDLFLTNEWPSGVTN 116
GL +AYLSG SSE ++ DV +L+ +L VD+ LT+ WP V+N
Sbjct: 106 GASGLQIAYLSGIESSSEPAPAYCFTAKDVTSLKMSLMSNSKFKGVDILLTSSWPKDVSN 165
Query: 117 KAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHV 171
A L + + +S L +KPRYH A +G Y R PY N +A HV
Sbjct: 166 YGNA---LPNEASKKCGSALISNLAFNLKPRYHFAALEGENYERLPYRNHLVLQENAQHV 222
Query: 172 TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAK 231
+RF+ LA VGN +K+K+I+A + P MS DI+ + K
Sbjct: 223 SRFISLASVGNLDKKKYIYAFNIVP---MSLTDIA---------------------DLVK 258
Query: 232 RPSDSVSDSQYWRYDVSQKRQK-HGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQC 290
+P D V+++ Y + D + K + + ++ +F + + P+G+K TD
Sbjct: 259 QPLD-VTENPYRKSDKDTPKSKGNKSAEEEEPTQQFFFDLNKPQGKK----RQTDG---- 309
Query: 291 LRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESH 350
KG + + KH + CWFCL+SP VE H
Sbjct: 310 ----------KGGRQSQAKQPRKH-----------------PQPTGPCWFCLASPEVEKH 342
Query: 351 LIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQG 410
L+VS+G+ Y AL KG L+ DHVL++P+ H +T+ S + KE+ +++ +L ++K +G
Sbjct: 343 LVVSIGDNCYVALAKGGLMSDHVLILPIGHYQSTVDLSSDVVKEVEQYKAALRTFFKTKG 402
Query: 411 KEAVFFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGR 468
K V FE + + H LQ VP+P S +++ F L A++ G + L + SD +
Sbjct: 403 KRYVMFER-NYKSQHLQLQVVPLPLSCCTTEDIKETFILQAQEQGMELLEI--PEHSDIK 459
Query: 469 RSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--GLLNIADKADWRNC 526
+ + +FYVEL G L H I+++ FP QFGREVLA +LNI +ADW++C
Sbjct: 460 QIAQP----GTPYFYVELDSGEKLFHRIKKH--FPLQFGREVLASEAILNIPTRADWKDC 513
Query: 527 MLGKEEETKMVEDFKKRFEAFD 548
+ EE + + F+ FE FD
Sbjct: 514 KSSRAEEEDLTKTFRDAFEPFD 535
>sp|Q5RGJ5|C19L1_DANRE CWF19-like protein 1 OS=Danio rerio GN=cwf19l1 PE=2 SV=1
Length = 544
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 164/565 (29%), Positives = 261/565 (46%), Gaps = 100/565 (17%)
Query: 2 NYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT 61
Y G + PI T +G AAS+ + DG ++ +N+ L G FT
Sbjct: 57 TYKSGAKKAPIHTCILG-----------AASQETVKYFPSSDGCELAENITCLGRRGIFT 105
Query: 62 -LHGLSVAYLSGRQS-SEGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTN 116
GL +AY+SGR++ E ++ D+ AL A L VD+ LT++WP GV
Sbjct: 106 GASGLQIAYVSGREAHQEPAPSHCFTPKDITALVAPLLSNSKFRGVDILLTSQWPRGVCQ 165
Query: 117 --KAAASDM-LVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDA 168
+ +DM G+S ++++L ++KPRYH AG +GV Y R PY N +
Sbjct: 166 YGNSPETDMKFCGVS-------SIADLADKLKPRYHFAGLEGVHYERLPYRNHVVLQENT 218
Query: 169 VHVTRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKE 228
HV+RF+ LA V N K+K+++A + P M + ++ + + T +PY L
Sbjct: 219 QHVSRFIALATVNNPAKKKYLYAFNIIPMKNMDSTELVKQPQDVTENPYRKL-------- 270
Query: 229 AAKRPSDSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDARE 288
+ D + R S TDA+E
Sbjct: 271 --------MKDGKKERQSASM----------------------------------TDAQE 288
Query: 289 QCLRGVCLDFIIKGKCEKGPECSYKHSLQND-DSQRTHRSENASANRSKECWFCLSSPSV 347
+ D +K P+ + Q+D D H+ + CWFCL+SP V
Sbjct: 289 EPASQFFFDL-----GQKNPQRQHGRKRQSDGDRPNQHKQPRRPPQPTGPCWFCLASPEV 343
Query: 348 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK 407
E HL++S+G + Y AL KG L DHVL++P+ H + + + E +E+ +++++ + K
Sbjct: 344 EKHLVISIGTHCYMALAKGGLTPDHVLLLPIGHYQSVVDLASEVVEEMEKYKSAFKKFCK 403
Query: 408 NQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSS 465
++GK V FE + R H LQAVP+P K + +++ F AE+ + + +
Sbjct: 404 SKGKRCVLFER-NYRSQHLQLQAVPVPMEKCSTEDIKEAFMTQAEEQQMELMEIPA---- 458
Query: 466 DGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--GLLNIADKADW 523
L+ +FYVEL G L + I++N FP QFGREVLA ++NI ++DW
Sbjct: 459 --HTDLKQIAPPGTPYFYVELDTGDKLFYRIKKN--FPLQFGREVLASEAVMNIPMRSDW 514
Query: 524 RNCMLGKEEETKMVEDFKKRFEAFD 548
R C + +EEE + + +E FD
Sbjct: 515 RECKISREEEEDQAKQVRSDYEPFD 539
>sp|O16216|C19L1_CAEEL CWF19-like protein 1 homolog OS=Caenorhabditis elegans GN=F17A9.2
PE=3 SV=2
Length = 533
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 160/556 (28%), Positives = 245/556 (44%), Gaps = 97/556 (17%)
Query: 4 VEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TL 62
+ G E PIPTY +G + + + + + + NL +L G T
Sbjct: 56 INGNIEFPIPTYILG------------PANPRYSYLYPEESIEFSSNLTYLGKKGLLNTA 103
Query: 63 HGLSVAYLSGRQSSEGQQFGTYSQDDVDALR-ALAEEPGI--VDLFLTNEWPSGVTNKAA 119
GL +AYLSG + S + + + DV+ L L + G D+ LT+ WP+ + +
Sbjct: 104 SGLQIAYLSGVEGS-SKDLSCFDKADVEELLIPLGTQVGFSGTDILLTSVWPADIARHSH 162
Query: 120 ASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRF 174
S +S+L A +KPRYH AG GV Y R+PY N A H TRF
Sbjct: 163 NQP-----SKPQPGSVLLSKLAAHLKPRYHFAGL-GVHYERQPYRNHRVLLEPARHTTRF 216
Query: 175 LGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPS 234
+GLA +GN EKQK+++A + P M +++ + PN + PY L + +KE R +
Sbjct: 217 IGLAAIGNPEKQKWLYACNVKPMRKMEKEELTAQPPNASEFPYRELLEEIAAKETLSRMN 276
Query: 235 DSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGV 294
+ + +Y + G G+G K RH+ +
Sbjct: 277 GNGQRPEGSQYRFEMGGAEDGAGNGRK-------------------RHNDGGND------ 311
Query: 295 CLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVS 354
G K P L N D+++ HL+V+
Sbjct: 312 -------GPRNKQPVGPCWFCLSNVDAEK--------------------------HLVVA 338
Query: 355 VGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 414
+G Y A+PKGPL EDHV+V+ V H+ + +S E E+ +F+++ + QGK V
Sbjct: 339 IGNKCYAAMPKGPLTEDHVMVLSVGHIQSQVSAPVEVRDEIEKFKSAFTLMANKQGKALV 398
Query: 415 FFEWLSKRGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQ 474
FE + R H +Q V I S + A++ F AA GF+ + + SL
Sbjct: 399 TFER-NFRTQHLQVQMVMIDKSSSKALKSSFTTAAACAGFELVTMGPDE------SLLDM 451
Query: 475 FDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLAG--LLNIADKADWRNCMLGKEE 532
+ C +F ELP+G+ L + FP FGREVLA +L+ DK DW+ C+L KE+
Sbjct: 452 VNEGCPYFVAELPDGSKL--FTRSMKGFPLHFGREVLASTPILDCEDKVDWKACVLAKEK 509
Query: 533 ETKMVEDFKKRFEAFD 548
E ++V K F+ FD
Sbjct: 510 EVELVNKLKSDFKPFD 525
>sp|Q8CI33|C19L1_MOUSE CWF19-like protein 1 OS=Mus musculus GN=Cwf19l1 PE=2 SV=2
Length = 537
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 165/565 (29%), Positives = 248/565 (43%), Gaps = 107/565 (18%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT- 61
Y G + PI TY +G A ++ +AN DG ++ +N+ +L G FT
Sbjct: 56 YKTGNKKAPIQTYVLG-----------ANNEETANYFQGADGCELAENITYLGRKGVFTG 104
Query: 62 LHGLSVAYLSGRQS-SEGQQFGTYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNK 117
GL + YLSG +S E ++S DV +LR + A + VD+ LT+ WP V +
Sbjct: 105 SSGLQIVYLSGTESLDEPVPAHSFSPKDVSSLRTMLCSASQFKGVDILLTSPWPKYVGSF 164
Query: 118 AAASDMLVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHV 171
+S G D+ N S +S L +KPRYH A + +Y R PY N A H
Sbjct: 165 GNSS----GEVDTKNCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQESAQHA 220
Query: 172 TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAK 231
TRF+ LA VGN EK+K+++A S P M+ A++ + P+ T +PY D G +
Sbjct: 221 TRFIALANVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYR--DSGKQAAGGKH 278
Query: 232 RPSDSVSDSQYWRYDVSQK--RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQ 289
P+ + + +D+S+K R++ G + C F
Sbjct: 279 IPAPQEESACQFFFDLSEKQGRKRPSTGRDTRPPHAKQPRKPPQPPGPCWF--------- 329
Query: 290 CLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSV-E 348
C PE KH + N C+ L+ + +
Sbjct: 330 --------------CLASPEVE-KHLV---------------VNIGTHCYLALAKGGLSD 359
Query: 349 SH-LIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK 407
H LI+ +G Y +VE E EK ++ +L ++K
Sbjct: 360 DHVLILPIGHYQSVVELSAEVVE-------------------EVEK----YKATLQRFFK 396
Query: 408 NQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSS 465
++GK V FE + R H LQ +P+P S A ++D F A++ + L + S
Sbjct: 397 SRGKRCVLFER-NYRSHHLQLQVIPVPLSCCATDDIKDAFITQAQEQQIELLEI--PEHS 453
Query: 466 DGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--GLLNIADKADW 523
D ++ + ++FYVEL G L H I++N FP QFGREVLA +LNI +KADW
Sbjct: 454 DIKQIAQP----GAAYFYVELDTGEKLFHRIKKN--FPLQFGREVLASEAILNIPEKADW 507
Query: 524 RNCMLGKEEETKMVEDFKKRFEAFD 548
R C K+EE + F+K FE FD
Sbjct: 508 RQCQTSKDEEEALARRFRKDFEPFD 532
>sp|Q69YN2|C19L1_HUMAN CWF19-like protein 1 OS=Homo sapiens GN=CWF19L1 PE=1 SV=2
Length = 538
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 249/563 (44%), Gaps = 102/563 (18%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT- 61
Y G + PI TY +G A ++ + DG ++ +N+ +L G FT
Sbjct: 56 YKTGIKKAPIQTYVLG-----------ANNQETVKYFQDADGCELAENITYLGRKGIFTG 104
Query: 62 LHGLSVAYLSGRQSSEGQQFG-TYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNK 117
GL + YLSG +S G ++S DV +LR + + VD+ LT+ WP V N
Sbjct: 105 SSGLQIVYLSGTESLNEPVPGYSFSPKDVSSLRMMLCTTSQFKGVDILLTSPWPKCVGNF 164
Query: 118 AAASDMLVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHV 171
+S G D+ S VS L +KPRYH A + +Y R PY N +A H
Sbjct: 165 GNSS----GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIILQENAQHA 220
Query: 172 TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAK 231
TRF+ LA VGN EK+K+++A S P M AA++ + P+ T +PY Q + +
Sbjct: 221 TRFIALANVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASIGKQIL 280
Query: 232 RPSDSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCL 291
P + S Q++ +D+++K+ + G R K + +
Sbjct: 281 APVEE-SACQFF-FDLNEKQGRKRSSTG--------------RDSKSSPHPKQPRKPPQP 324
Query: 292 RGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSV-ESH 350
G C C PE KH + N C+ L+ + + H
Sbjct: 325 PGPCW------FCLASPEVE-KHLV---------------VNIGTHCYLALAKGGLSDDH 362
Query: 351 -LIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ 409
LI+ +G Y +VE+ VE T L RF +K++
Sbjct: 363 VLILPIGHYQSVVELSAEVVEE------VEKYKAT----------LRRF-------FKSR 399
Query: 410 GKEAVFFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDG 467
GK V FE + + H LQ +P+P S + ++D F A++ + L + SD
Sbjct: 400 GKWCVVFE-RNYKSHHLQLQVIPVPISCSTTDDIKDAFITQAQEQQIELLEI--PEHSDI 456
Query: 468 RRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--GLLNIADKADWRN 525
++ + ++FYVEL G L H I++N FP QFGREVLA +LN+ DK+DWR
Sbjct: 457 KQIAQP----GAAYFYVELDTGEKLFHRIKKN--FPLQFGREVLASEAILNVPDKSDWRQ 510
Query: 526 CMLGKEEETKMVEDFKKRFEAFD 548
C + KE+E + F+K FE +D
Sbjct: 511 CQISKEDEETLARRFRKDFEPYD 533
>sp|Q5R8R4|C19L1_PONAB CWF19-like protein 1 OS=Pongo abelii GN=CWF19L1 PE=2 SV=1
Length = 538
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 130/215 (60%), Gaps = 13/215 (6%)
Query: 338 CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGR 397
CWFCL+SP VE HL+V++G + Y AL KG L +DHVL++P+ H + + S E +E+ +
Sbjct: 328 CWFCLASPEVEKHLVVNIGTHCYLALAKGGLSDDHVLILPIGHYQSVVELSAEVVEEVEK 387
Query: 398 FQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFK 455
++ +L ++K++GK V FE + + H LQ +P+P S A ++D F A++ +
Sbjct: 388 YKATLRRFFKSRGKRCVVFER-NYKSHHLQLQVIPVPVSCCATDDIKDAFITQAQEQQIE 446
Query: 456 FLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--G 513
L + SD ++ + ++FYVEL G L H I++N FP QFGREVLA
Sbjct: 447 LLEI--PEHSDIKQIAQP----GAAYFYVELDTGEKLFHRIKKN--FPLQFGREVLASEA 498
Query: 514 LLNIADKADWRNCMLGKEEETKMVEDFKKRFEAFD 548
+LN+ DK+DWR C + KE+E + F+K FE +D
Sbjct: 499 ILNVPDKSDWRQCQISKEDEETLARCFRKDFEPYD 533
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT- 61
Y G + PI TY +G A ++ + DG ++ +N+ +L G FT
Sbjct: 56 YKTGTKKAPIQTYVLG-----------ANNQETVKYFQDADGCELAENITYLGRKGIFTG 104
Query: 62 LHGLSVAYLSGRQSSEGQQFG-TYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNK 117
GL + YLSG +S G ++S DV +LR + + VD+ LT+ WP V N
Sbjct: 105 SSGLQIVYLSGTESLNEPVPGYSFSPKDVSSLRTMLCTTSQFKGVDILLTSPWPKYVGNF 164
Query: 118 AAASDMLVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHV 171
+S G D+ S VS L +KPRYH A + +Y R PY N +A H
Sbjct: 165 GNSS----GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIVLQENAQHA 220
Query: 172 TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAK 231
TRF+ LA VGN EK+K+++A S P M AA++ + P+ T +PY Q + + +
Sbjct: 221 TRFIALANVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASTGKQIL 280
Query: 232 RPSDSVSDSQYWRYDVSQKRQKHGGGDGDK 261
P + + ++ + Q R++ G K
Sbjct: 281 APVEESACQFFFDLNEKQGRKRSSTGRDSK 310
>sp|Q10414|MU161_SCHPO CWF19-like protein mug161 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=mug161 PE=1 SV=1
Length = 561
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 238/585 (40%), Gaps = 133/585 (22%)
Query: 7 RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGL 65
+ ++PIP YF GVG A + S M G +V NLF + G T +
Sbjct: 65 KVKVPIPVYF----GVGTAGL-----PESIISHMAMYGPEVAPNLFCMGICGFMKTFYKF 115
Query: 66 SVAYLSGRQSSEG-----QQF------GTYSQDDVDALRALAEEPGIVDLFLTNEWPSGV 114
++A L G + E ++F + + DV L D+ ++EWP V
Sbjct: 116 TIAQLGGSYNEEKYYQPPEKFEQSLNEKCFHRSDVQKLSKRC------DILFSSEWPEDV 169
Query: 115 TNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHV--- 171
+ + + ++ L A P+Y V+Y REPY N A++V
Sbjct: 170 QENSTLPERKL-----PKGCMPLAALAANCMPQYFFVPGP-VYYEREPYKNSAAINVNTG 223
Query: 172 --TRFLGLAPVGNKEKQKFIHALSPTPAAT--MSAADISMKTPNTTLSPYTFLDQGSHSK 227
T F+ LAP N + +KF +A + P T M A PN T SP+ H
Sbjct: 224 TVTHFVALAPFKNSKNEKFSYAFTLYPLTTEYMQPA-----PPNCTASPF------EHRP 272
Query: 228 EAAKRPS-DSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDA 286
KR S D + Q ++ S+ ++ N H +++
Sbjct: 273 IPLKRASEDQIIPQQTNKFHKSKSSTA-------------LFKSKKDSSSSLNKMHKSES 319
Query: 287 REQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASA---NRSK----ECW 339
HS N+ H+SE+ ++ RSK C+
Sbjct: 320 ---------------------------HSALNN----LHKSESGTSLNNRRSKVGPGSCF 348
Query: 340 FCLSSPSVESHLIVSVGEYYYCALPKGPLVED-----------HVLVIPVEHVPNTISTS 388
FCLS+P+V HLIV++G Y ALPKGPL HVL+IP+ H + +ST
Sbjct: 349 FCLSNPNVALHLIVAIGNEAYMALPKGPLTTTASNTPALASSGHVLIIPIAHA-SALSTL 407
Query: 389 PECE-----KELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQD 443
+ E+ RF+ ++ Y +A+ +E G H + Q +PIP + ++
Sbjct: 408 SDTSYEKTLNEMNRFRKAVTDMYNACDSDALVYEISRANGVHLHWQMIPIPKISSHRIES 467
Query: 444 IFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFP 503
+F A++ G+ F R ++F V LP G +L H ++ ERF
Sbjct: 468 VFLEMAKEAGYDF-------------EERDVEPHELNYFRVFLPSGKILIHRLQLRERFD 514
Query: 504 AQFGREVLAGLLNIADKADWRNCMLGKEEETKMVEDFKKRFEAFD 548
QFGR A +L + D+ DWR C+ ++EE E FK F+ +D
Sbjct: 515 LQFGRRAAAKILGLEDRVDWRKCVQTEDEEKAESEAFKMCFKPYD 559
>sp|A1Z8J0|C19L1_DROME CWF19-like protein 1 homolog OS=Drosophila melanogaster GN=CG7741
PE=2 SV=1
Length = 545
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 13/232 (5%)
Query: 319 DDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPV 378
D+++R R + K CWFCLSSP VE HLI++VGE++Y AL KGP+ + HV+++
Sbjct: 321 DNNKRDKRPRIPQIEQDK-CWFCLSSPDVEKHLIITVGEHFYLALAKGPINKHHVMILST 379
Query: 379 EHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKA 438
+HVP SP+ KEL +F+ +L ++K G+ F E K H + A+ A
Sbjct: 380 KHVPCAAQLSPDDWKELNKFKAALRKFFKTLGQVVCFTERHYK-SVHLQINALAFEEGYA 438
Query: 439 AAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEE 498
++ F AE+ +F ++ + D + L +F ELP+ + L + +
Sbjct: 439 WKIKHSFEDKAEEFNLEF---ETLPALDSEKMLPEM----GPYFLAELPDDSTL--ITRQ 489
Query: 499 NERFPAQFGREVLA--GLLNIADKADWRNCMLGKEEETKMVEDFKKRFEAFD 548
+ FP F R+V LLN +K +W++C+L K+EE VEDF+K F FD
Sbjct: 490 MKHFPIHFARDVFCSENLLNCDEKVNWKDCLLDKDEEVAYVEDFRKAFAPFD 541
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 127/281 (45%), Gaps = 51/281 (18%)
Query: 1 MNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFK--MDGFKVTDNLFWLKGSG 58
+ Y G I +PTY +G ++ + F+ DG ++ NL +L G
Sbjct: 75 IAYKNGFKHITVPTYILG------------PNQREHEKYFENLTDG-EICTNLTYLGRRG 121
Query: 59 NFTLH-GLSVAYLSGRQS-----SEGQQFGTYSQDDVDALRA-------LAEEPGIVDLF 105
+TL G+ +AYLSG ++ S G + +++ DV A+R + E VD+
Sbjct: 122 VYTLSSGVKIAYLSGLEAQGTADSAGSEH-EFTKADVIAVRNSCLVSKNCSTEYRGVDVL 180
Query: 106 LTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPY-- 163
LT++WP G+ K A+ VS L EIKPRYH G Y P+
Sbjct: 181 LTSQWPFGMQEKENAT-----------ASKLVSFLCREIKPRYHFCAINGTHYESAPFRM 229
Query: 164 ---SNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFL 220
TRF+ LA VGN EK K+I+ALS P D++ KT N P+ L
Sbjct: 230 PKDETTQFELCTRFISLAEVGNAEKAKYIYALSLKPVDKSRLLDLAQKTTNEIPCPFIGL 289
Query: 221 DQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHGGGDGDK 261
D G A +DS + QY+ YD+ R+K GGD +K
Sbjct: 290 DLG-----GAIGKNDSSENRQYF-YDMDGGRRKRQGGDNNK 324
>sp|P53255|DRN1_YEAST CWF19-like protein DRN1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DRN1 PE=1 SV=1
Length = 507
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 22/233 (9%)
Query: 338 CWFCLSSPSVESHLIVSVGEYYYCALPKGPL--------VEDHVLVIPVEHVPNT-ISTS 388
C FC S+P++E H+I+S+G+ Y KGPL + H L+IP+EH+P S +
Sbjct: 269 CHFCFSNPNLEDHMIISIGKLVYLTTAKGPLSVPKGDMDISGHCLIIPIEHIPKLDPSKN 328
Query: 389 PECEKELGRFQNSLM-MYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKA----AAVQD 443
E + + ++ SL+ M Y + FE S+R H + Q +P+P +A+
Sbjct: 329 AELTQSILAYEASLVKMNYIKFDMCTIVFEIQSERSIHFHKQVIPVPKYLVLKFCSALDR 388
Query: 444 IFNLAAEKLG----FKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEEN 499
+ EK +F S S + Q + F E PE +L N
Sbjct: 389 QVHFNNEKFTRNAKLEFQCYDSHSSKQYVDVINNQSNNYLQFTVYETPEADPKIYLATFN 448
Query: 500 --ERFPAQFGREVLAGLLNIADKADWRN--CMLGKEEETKMVEDFKKRFEAFD 548
E QFGR VLA LLN+ + W + C+ K++ET E F+K + +D
Sbjct: 449 ASETIDLQFGRRVLAFLLNLPRRVKWNSSTCLQTKQQETIEAEKFQKAYRTYD 501
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 55/233 (23%)
Query: 23 GAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL-HGLSVAY-------LSGRQ 74
G +++L + + N K K+ +N+ L G + L +G++++Y L G +
Sbjct: 53 GLPQLILLSCDKANNSKSK----KINENVTLLHNMGTYKLANGITLSYFIYPDDTLQGEK 108
Query: 75 SSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTD 134
S +FG S+D VD L LT EW ++ + L G
Sbjct: 109 KSILDEFGK-SEDQVDIL-------------LTKEWGLSISERCGR---LSG-------S 144
Query: 135 STVSELVAEIKPRYHIAGSKGV-FYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALS 193
V EL +++ RYH A S + FY EP+ + ++RFL + G+ +K +
Sbjct: 145 EVVDELAKKLQARYHFAFSDEINFYELEPFQ-WERERLSRFLNIPKYGSGKKWAY----- 198
Query: 194 PTPAATMSAADISMKT----PNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQY 242
A M D +K PN +PY + S+ KRP ++ +++ +
Sbjct: 199 ---AFNMPIGDNELKDEPEPPNLIANPYNSVVTNSN-----KRPLETETENSF 243
>sp|Q9VXT5|C19L2_DROME CWF19-like protein 2 homolog OS=Drosophila melanogaster GN=CG9213
PE=1 SV=2
Length = 687
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 8/232 (3%)
Query: 296 LDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSV 355
LD I K K S + + R H A+ + C C S ++ L+VS+
Sbjct: 434 LDDIFADKVRKQISASDAEKREMQSAIREHEKLVATLDN---CERCFDSAKLDKQLLVSL 490
Query: 356 GEYYYCALP-KGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 414
G+ Y +LP L H ++ ++HVP + +E+ F+ +L + + ++ V
Sbjct: 491 GDKIYLSLPWYMGLQSGHCILTTLQHVPCCTQLDEDAWEEISNFRKALTRMFAARRQDVV 550
Query: 415 FFEWLSK--RGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLR 472
F+E +K R H ++ +PIP S+ F A E+ ++ K S ++SLR
Sbjct: 551 FYEIANKLHRRPHLSVHCIPIPASQGEMAPFYFKKAIEESEQEWCINKQLVSL-RQKSLR 609
Query: 473 AQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLAGLLNIADKADWR 524
A + + +V + +H+IE+ +RFPA F +E+L G+L + A WR
Sbjct: 610 AAIPKGLPYVWVHFGMDSGFAHVIEDEDRFPANFAQEILGGMLELNPNA-WR 660
>sp|Q10946|C19L2_CAEEL CWF19-like protein 2 homolog OS=Caenorhabditis elegans
GN=B0361.2/B0361.1 PE=2 SV=2
Length = 460
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 10/217 (4%)
Query: 337 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVED-HVLVIPVEHVPNTISTSPECEKEL 395
+C C+ S ++ H I++VG Y A+ + ++D H++++P +H +TI E+
Sbjct: 238 DCSRCIDSSRLKKHNIIAVGINTYLAVVEWDGLDDEHLIIVPTQHCSSTIQLDENVWDEM 297
Query: 396 GRFQNSLMMYYKNQGKEAVFFEWLSKR---GTHANLQAVPIPTSKAAAVQDIFNLAAEKL 452
++ L+ +K+Q ++ +FFE +S+ H ++ VP+ F A +
Sbjct: 298 RLWRKGLVAVWKSQNRDCIFFE-MSRHVDSNPHVFIECVPVEQEIGDMASIYFKKAINEC 356
Query: 453 GFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA 512
+++ K + + LR Q + S+F V+ +H+IE ++ FP+ F E++A
Sbjct: 357 EGEYMDNKKLIET---KDLRRQIPKGFSYFAVDFGLSNGFAHVIESHDHFPSTFATEIIA 413
Query: 513 GLLNIADKADWRNCMLGKEEETK-MVEDFKKRFEAFD 548
G+L++ K WR + + K E+FKK +E D
Sbjct: 414 GMLDLPPKK-WRKRETDEMSKQKSRAENFKKLWEPVD 449
>sp|Q3LSS0|C19L2_DANRE CWF19-like protein 2 OS=Danio rerio GN=cwf19l2 PE=2 SV=1
Length = 960
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 332 ANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKG-PLVEDHVLVIPVEHVPNTISTSPE 390
A R ++C C S + HLI++VG Y LP L E H L++PV+H +
Sbjct: 736 AGRMEKCPHCFDSAELPKHLIIAVGTKVYLCLPNSVSLTEGHCLIVPVQHHTAATGLDED 795
Query: 391 CEKELGRFQNSLMMYYKNQGKEAVFFE--WLSKRGTHANLQAVPIPTSKAAAVQDIFNLA 448
E+ F+ +L+ +++Q + VF E KR H + VP+P F A
Sbjct: 796 IWGEIQMFRRALVRMFESQELDCVFLETHMNPKRHLHMVYECVPMPRELGDMAPIYFKKA 855
Query: 449 AEKLGFKFLATKSSKSSD-GRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFG 507
+ ++ K K D +R +R R +F V+ +H+IE ++FP FG
Sbjct: 856 IMESDEEWAMNK--KVVDLSKRDIRQAVPRGLPYFSVDFGLQGGFAHVIENEQKFPHYFG 913
Query: 508 REVLAGLLNIADKADWRNCMLGK-EEETKMVEDFKKRFEAFD 548
+E+L G+L++ + WR + +++ K V F + ++ FD
Sbjct: 914 KEILGGMLDLEPRR-WRKPIRENFDDQRKKVLKFAQWWKPFD 954
>sp|Q28C44|C19L2_XENTR CWF19-like protein 2 OS=Xenopus tropicalis GN=cwf19l2 PE=2 SV=1
Length = 922
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 11/229 (4%)
Query: 325 HRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKG-PLVEDHVLVIPVEHVPN 383
HRS A+ + C FC + + HLIV++G Y LP L E H L++P++H
Sbjct: 696 HRSLTATMEK---CRFCFDNAELPKHLIVAIGTKVYLCLPNHLSLTEGHCLIVPLQHHTA 752
Query: 384 TISTSPECEKELGRFQNSLMMYYKNQGKEAVFFE--WLSKRGTHANLQAVPIPTSKAAAV 441
+ + E+ F+ +L+ ++++G + VF E +++ H + +P+P
Sbjct: 753 STLLDEDIYNEIQVFRKALVRMFESKGLDCVFLESNIYARKRLHLVYECIPLPKEVGDMA 812
Query: 442 QDIFNLAAEKLGFKFLATKSSKSSD-GRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENE 500
F A + ++ K K D + +R + +F V+ +H+IE+
Sbjct: 813 PIYFKKAIMESDEEWSMNK--KLIDLSTKDIRRAVPKGLPYFSVDFGLQGGYAHVIEDEH 870
Query: 501 RFPAQFGREVLAGLLNIADKADWRNCMLGK-EEETKMVEDFKKRFEAFD 548
+FP+ FG+E++ G+L++ + WR + + E++ K V +F + ++ FD
Sbjct: 871 KFPSYFGKEIIGGMLDLEPRI-WRKAVRERFEDQRKKVLEFAQWWKPFD 918
>sp|Q2TBE0|C19L2_HUMAN CWF19-like protein 2 OS=Homo sapiens GN=CWF19L2 PE=1 SV=4
Length = 894
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 325 HRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPK-GPLVEDHVLVIPVEHVPN 383
HRS A + C +C S HLIV++G Y LP L E H L++P++H
Sbjct: 665 HRSLAAQMEK---CLYCFDSSQFPKHLIVAIGVKVYLCLPNVRSLTEGHCLIVPLQHHRA 721
Query: 384 TISTSPECEKELGRFQNSLMMYYKNQGKEAVFFE--WLSKRGTHANLQAVPIPTSKAAAV 441
+ +E+ F+ SL+ ++++G + +F E K+ H + +P+P
Sbjct: 722 ATLLDEDIWEEIQMFRKSLVKMFEDKGLDCIFLETNMSMKKQYHMVYECIPLPKEVGDMA 781
Query: 442 QDIFNLAAEKLGFKFLATKSSKSSD-GRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENE 500
F A + ++ K K D + +R R +F V+ +H+IE+
Sbjct: 782 PIYFKKAIMESDEEWSMNK--KLIDLSSKDIRKSVPRGLPYFSVDFGLHGGFAHVIEDQH 839
Query: 501 RFPAQFGREVLAGLLNIADKADWR 524
+FP FG+E++ G+L+I + WR
Sbjct: 840 KFPHYFGKEIIGGMLDIEPRL-WR 862
>sp|Q8BG79|C19L2_MOUSE CWF19-like protein 2 OS=Mus musculus GN=Cwf19l2 PE=2 SV=1
Length = 887
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 313 KHSLQNDDSQRTHR-SENAS-ANRSKECWFCLSSPSVESHLIVSVGEYYYCALPK-GPLV 369
+H + ++SQR +E+ S A + +C +C S HLIV++G Y LP L
Sbjct: 641 EHLGKKEESQRRRAIAEHQSLAAKMAKCLYCFDSSQFPKHLIVAIGVKVYLCLPSFQSLT 700
Query: 370 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLS--KRGTHAN 427
E H ++P++H + +E+ F+ SL+ ++++ + +F E K+ H
Sbjct: 701 EGHCFIVPLQHHQAATVLDEDVWEEIQMFRKSLVKMFEDKELDCIFLETNMGLKKHYHMV 760
Query: 428 LQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSD-GRRSLRAQFDRNCSFFYVEL 486
+ +P+P F A + ++ K K D + +R R +F V+
Sbjct: 761 YECIPLPKEVGDMAPIYFKKAIMESDEEWSMNK--KLIDLSSKDIRKSVPRGLPYFAVDF 818
Query: 487 PEGTVLSHLIEENERFPAQFGREVLAGLLNIADKADWR 524
+H+IE+ RFP FG+E++ G+L++ + WR
Sbjct: 819 GLQGGFAHIIEDQYRFPHYFGKEIIGGMLDLEPRL-WR 855
>sp|Q09909|CWF19_SCHPO Pre-mRNA-splicing factor cwf19 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf19 PE=1 SV=1
Length = 639
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 22/227 (9%)
Query: 338 CWFCLSSPSVESHLIVSVGEYYYCALPKGP-LVEDHVLVIPVEHVPNTISTSPECEKELG 396
C CL+ + ++S+ Y +LP P L + H L++P H NT+S + E+
Sbjct: 412 CPLCLNYETQPLAPVISLSHRAYVSLPTQPELAKYHCLIVPTGHRINTLSCDEDEWDEIR 471
Query: 397 RFQNSLMMYYKNQGKEAVFFEWL--SKRGTHANLQAVP----IPTSKAAAVQDIFNLAAE 450
F + + + + +F+E +R H ++ +P I + A ++ + + E
Sbjct: 472 NFMKCIALMFDSMNLGVIFYENAPSPQRYMHTAIECIPVSKRILSLAPAYFREALSTSDE 531
Query: 451 KLG--FKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPA--QF 506
+ K + T G+ + R + +F+V H++E+ + + Q
Sbjct: 532 EWSQHRKIIDTLEGSKKYGKWAFRKMMVKELGYFHVWFSIDGGYGHVVEDEKAWGRHDQV 591
Query: 507 GREVLAGLLN-----IADKADWRNCMLGKEEETKMVEDFKKRFEAFD 548
R+V A +LN I K W GK++ + + F+ RFE FD
Sbjct: 592 PRQVFASMLNLPPEVIRRKGSW----TGKKDPREDM--FRSRFEKFD 632
>sp|O13765|DBR1_SCHPO Lariat debranching enzyme OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=dbr1 PE=3 SV=2
Length = 478
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 39/175 (22%)
Query: 2 NYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVTDNLFWLKGSGNF 60
NY GR++ PI T F+G + ++N ++ G V N++++ S
Sbjct: 75 NYYNGRNKAPILTIFVG------------GNHEASNYLDELPYGGWVAPNIYYMGRSSVI 122
Query: 61 TLHGLSVAYLSGRQSSEGQQFGTYS----------------QDDVDALRALAEEPGIVDL 104
+ GL +A +SG S+ + G Y + DV +L++L + +D+
Sbjct: 123 NVGGLRIAGISGIYSAMDYKKGRYEGLPYNYKMLKSIYHTREFDVLSLKSLQKP---IDI 179
Query: 105 FLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAG 152
FL+++WP G+ + +L + + + EL+ E+KPRY +A
Sbjct: 180 FLSHDWPRGIEQHGDVAKLLRHKPFFRNEVERNDLGSPALEELLVELKPRYWMAA 234
>sp|O74463|YQC1_SCHPO Uncharacterized protein C1739.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1739.01 PE=1 SV=2
Length = 547
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 265 KFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRT 324
KF +G+C GE C F H + R +C + +KG C+ GP+C+ H+L + +
Sbjct: 48 KFFRNGTCTAGENCPFSHSLETE----RPIC-KYFLKGNCKFGPKCALSHALPGNTNLPN 102
Query: 325 HRSENASA 332
S N A
Sbjct: 103 GTSTNTMA 110
>sp|Q8BYK8|ZC3H6_MOUSE Zinc finger CCCH domain-containing protein 6 OS=Mus musculus
GN=Zc3h6 PE=2 SV=2
Length = 1177
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 259 GDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHS 315
G ++C K+ G C +G+ C F HD + ++ + VC + ++G C KG C Y HS
Sbjct: 272 GKQIC-KYFLEGRCIKGDHCKFNHDAELEKK--KEVC-KYYLQGYCTKGENCIYMHS 324
>sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens
GN=ZC3H6 PE=2 SV=2
Length = 1189
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 259 GDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHS 315
G ++C K+ G C +G++C F HD + ++ + +C F ++G C KG C Y H+
Sbjct: 274 GKQIC-KYFLEGRCIKGDQCKFDHDAELEKR--KEIC-KFYLQGYCTKGENCIYMHN 326
>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp.
japonica GN=Os01g0256800 PE=2 SV=1
Length = 1007
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 260 DKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKH 314
++MC F +GSC RG+ C+F H + A R +C F+ C G CS+ H
Sbjct: 726 NEMCV-FFLNGSCNRGDTCHFSHSSRAP----RPICKFFLTLQGCRNGNSCSFSH 775
>sp|Q6C4K3|DUS3_YARLI tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=DUS3 PE=3 SV=1
Length = 622
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 258 DGDKMC---FKFIYSGS---CPRGEKCNFRHDT----DAREQCLRGVCLDFIIKGKCEKG 307
D KMC +F GS C G+KC F HD +++ + + GVC F + G+C +G
Sbjct: 89 DAIKMCSSALQFKEDGSPQECSYGDKCKFEHDLQKYLESKPKDIEGVCPVFDLTGQCPQG 148
Query: 308 PECSYKHSLQNDDSQRTHRSENASAN 333
+C + S ++ + + E AN
Sbjct: 149 YKCRWLSSHRDSEGKLLVDEEKKKAN 174
>sp|P47977|CTH2_YEAST mRNA decay factor CTH2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TIS11 PE=1 SV=1
Length = 285
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRH---DTDAREQCLR---GVCLDFIIKGKCEKGPECSYKH 314
++C F GSCP G KC F H + ++ C C+++ G C G C +KH
Sbjct: 173 ELCESFTLKGSCPYGSKCQFAHGLGELKVKKSCKNFRTKPCVNWEKLGYCPYGRRCCFKH 232
Query: 315 SLQND 319
ND
Sbjct: 233 GDDND 237
>sp|Q61D44|DBR1_CAEBR Lariat debranching enzyme OS=Caenorhabditis briggsae GN=dbr-1 PE=3
SV=1
Length = 511
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 46/222 (20%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL 62
Y G + P+ T FIG G A L N G V N+F++ +
Sbjct: 111 YYSGEKKAPVLTLFIG--GNHEASGFLCELPN---------GGWVAPNIFYMGFANCIQF 159
Query: 63 HGLSVAYLSGRQSSEGQQFGTYSQD----------------DVDALRALA-----EEPGI 101
GL +A LSG S +F Y + D+ LR L +
Sbjct: 160 AGLRIAGLSGIYSHGDVEFSHYERPAFAERDVKSAYHVRNVDMFRLRQLKAANNDKLSNP 219
Query: 102 VDLFLTNEWPSGVTNKAAAS------DMLVGISDSSNT-DSTVSELVAEIKPRYHIAGSK 154
+D+ L+++WP G+ + ++ D+ S + + +L+ + +PRY++A
Sbjct: 220 IDIMLSHDWPGGIPDFGDSAWLFKKKDLFEADHKSGKLGNPALMKLIYDCRPRYYLAAHL 279
Query: 155 GV-FYAREPY--SNVDAVHVTRFLGL-APVGNKEKQKFIHAL 192
+ F A P+ S + TRFL L P+ ++ F+ AL
Sbjct: 280 HIKFAALVPHKGSGSERPQPTRFLSLDKPIPGRQ---FMQAL 318
>sp|P47974|TISD_HUMAN Zinc finger protein 36, C3H1 type-like 2 OS=Homo sapiens GN=ZFP36L2
PE=1 SV=3
Length = 494
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 314
++C F SG+C GEKC F H R +C F G C GP C H
Sbjct: 157 ELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRC---H 213
Query: 315 SLQNDDSQRTHRSENASAN 333
+ N D +R S AS +
Sbjct: 214 FIHNADERRPAPSGGASGD 232
>sp|Q657B3|C3H7_ORYSJ Zinc finger CCCH domain-containing protein 7 OS=Oryza sativa subsp.
japonica GN=Os01g0572100 PE=2 SV=1
Length = 698
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 24/120 (20%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTD-----------AREQCLRG------------VCLD 297
K+C +++ G C +G C F HDT AR CL+G C +
Sbjct: 433 KVCHFYLH-GKCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDHELSKYPCHN 491
Query: 298 FIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGE 357
F+ G C +G +C + H + + T ++ ++A+ E C S + V GE
Sbjct: 492 FMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNASSVPEKANCQEQTSRQKTSTVYSGE 551
>sp|P0CS64|YTH1_CRYNJ mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=YTH1 PE=3 SV=1
Length = 332
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 23/126 (18%)
Query: 272 CPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENAS 331
C G+ C + HD + R VC+ F+ +GKCE G EC Y H R R E
Sbjct: 107 CKMGDNCEYTHDFNLRTM---PVCIWFVKQGKCELGGECLYFHP-------RDRRVECPD 156
Query: 332 ANRSKECWFCLSSPSV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVP------NT 384
NR FC+ P+ H+ + + Y P +D L P + P N
Sbjct: 157 YNRG----FCVLGPNCPRKHIRRRLCDAYAAGF--CPDGKDCKLAHPSPNRPPAESYINP 210
Query: 385 ISTSPE 390
I PE
Sbjct: 211 IPPDPE 216
>sp|P0CS65|YTH1_CRYNB mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=YTH1 PE=3 SV=1
Length = 332
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 23/126 (18%)
Query: 272 CPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENAS 331
C G+ C + HD + R VC+ F+ +GKCE G EC Y H R R E
Sbjct: 107 CKMGDNCEYTHDFNLRTM---PVCIWFVKQGKCELGGECLYFHP-------RDRRVECPD 156
Query: 332 ANRSKECWFCLSSPSV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVP------NT 384
NR FC+ P+ H+ + + Y P +D L P + P N
Sbjct: 157 YNRG----FCVLGPNCPRKHIRRRLCDAYAAGF--CPDGKDCKLAHPSPNRPPAESYINP 210
Query: 385 ISTSPE 390
I PE
Sbjct: 211 IPPDPE 216
>sp|Q8IXZ2|ZC3H3_HUMAN Zinc finger CCCH domain-containing protein 3 OS=Homo sapiens
GN=ZC3H3 PE=1 SV=3
Length = 948
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 262 MCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDS 321
+C F+ G CP G KC +H +C DF +G C +G +C H Q S
Sbjct: 755 VCSDFL-KGYCPLGAKCKKKHTL---------LCPDFARRGACPRGAQCQLLHRTQKRHS 804
Query: 322 QR 323
+R
Sbjct: 805 RR 806
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 249 QKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQC---LRGVCLDFIIKGKC- 304
Q+R+K + C + G C RGE+C + HD + C +RG C G C
Sbjct: 664 QRREKR-----KEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKK--TDGTCP 716
Query: 305 -------EKGPECSY 312
EK P CSY
Sbjct: 717 FSHHVSKEKMPVCSY 731
>sp|Q6L5G1|C3H39_ORYSJ Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa
subsp. japonica GN=Os05g0576300 PE=2 SV=1
Length = 343
Score = 39.7 bits (91), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLR------GVCLDFIIKGKCEKGPECSYKH 314
++C K+ +G+CP G++C F H +R VC + G C G C ++H
Sbjct: 272 ELCNKWEETGACPYGDQCQFAHGVAELRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRH 331
Query: 315 SLQNDD 320
S+ D
Sbjct: 332 SITPAD 337
>sp|A2ZVY5|C3H9_ORYSJ Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp.
japonica GN=Os01g0645000 PE=2 SV=1
Length = 333
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 221 DQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNF 280
D G E +P+DS ++ + + + G ++C K+ +G CP G++C F
Sbjct: 232 DGGKKGDEQKAQPADSGAELEVY----------NQGMFKTELCNKWEETGDCPYGDQCQF 281
Query: 281 RHDTDAREQCLR------GVCLDFIIKGKCEKGPECSYKHSL 316
H +R VC + C G C ++HSL
Sbjct: 282 AHGVTELRPVIRHPRYKTAVCRMVLAGDVCPYGHRCHFRHSL 323
>sp|P53781|TTP_BOVIN Tristetraprolin OS=Bos taurus GN=ZFP36 PE=2 SV=1
Length = 324
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 314
++C F SG C G KC F H Q R +C F ++G+C G C + H
Sbjct: 105 ELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYKTELCHKFYLQGRCPYGSRCHFIH 164
Query: 315 SLQNDDSQRTH 325
+ D + H
Sbjct: 165 NPSEDLAAPGH 175
>sp|Q5BF62|DUS3_EMENI tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=dus3 PE=3 SV=1
Length = 714
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 15/75 (20%)
Query: 258 DGDKMCFKFIYS-----GSCPRGEKCNFRHDTDA------RE--QCLRGVCLDFIIKGKC 304
D +C +YS CP G+KC F HD RE GVC + +GKC
Sbjct: 112 DSKGLCASRVYSPEFSPAECPFGDKCRFEHDLRTYLKEHKREDLNTFNGVCPVWSARGKC 171
Query: 305 EKGPECSY--KHSLQ 317
+ G +C + HS++
Sbjct: 172 DAGWKCRFVGSHSIE 186
>sp|P26651|TTP_HUMAN Tristetraprolin OS=Homo sapiens GN=ZFP36 PE=1 SV=1
Length = 326
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 314
++C F SG C G KC F H Q R +C F ++G+C G C + H
Sbjct: 107 ELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIH 166
Query: 315 SLQNDDSQRTH 325
+ D + H
Sbjct: 167 NPSEDLAAPGH 177
>sp|Q2UL89|DUS3_ASPOR tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=dus3 PE=3 SV=1
Length = 730
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 76/192 (39%), Gaps = 43/192 (22%)
Query: 159 AREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYT 218
A P +N + + R G+APV K +FI P AT + PNT +
Sbjct: 46 ASTPDNNANNIAPQRMRGVAPV----KPEFI-----IPRATGTEPQ-----PNTDDAAEA 91
Query: 219 FLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYS-----GSCP 273
+G+ +EA K+ + R S + +K +C I++ G+C
Sbjct: 92 ARHEGAQGQEAGKKKKKKPTGQNTNRTFGSSQDEK-------GLCPSRIFTPEFSPGACQ 144
Query: 274 RGEKCNFRHD--TDARE------QCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTH 325
GEKC F HD T +E GVC + KGKC G +C S H
Sbjct: 145 WGEKCRFEHDLRTYLKEYKRGDLTTFDGVCPVWDAKGKCLSGWKCRLVGS---------H 195
Query: 326 RSENASANRSKE 337
+E +A+ KE
Sbjct: 196 MTERETADGRKE 207
>sp|Q6S9E0|TTP_SHEEP Tristetraprolin OS=Ovis aries GN=ZFP36 PE=2 SV=1
Length = 325
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 314
++C F SG C G KC F H Q R +C F ++G+C G C + H
Sbjct: 105 ELCRTFSESGRCRYGAKCQFAHGLGELRQPSRHPKYKTELCHKFYLQGRCPYGSRCHFIH 164
Query: 315 SLQNDDSQRTH 325
+ D + H
Sbjct: 165 NPSEDLAAPGH 175
>sp|Q94K01|DBR1_ARATH Lariat debranching enzyme OS=Arabidopsis thaliana GN=DBR1 PE=2 SV=1
Length = 418
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKM--DGFKVTDNLFWLKGSGNF 60
Y G+ PIPT FIG + ++N +++ G+ T N+++L +G
Sbjct: 67 YYSGQEVAPIPTIFIG------------GNHEASNYLWELYYGGWAAT-NIYFLGFAGVV 113
Query: 61 TLHGLSVAYLSGRQSSEGQQFGTYSQD----------------DVDALRALAEEPGIVDL 104
+ + LSG + + G + + DV L L EEP +D+
Sbjct: 114 KFGNVRIGGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQL-EEP--LDI 170
Query: 105 FLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 157
FL+++WP G+T+ + ++ I + + + L+ ++KP+Y +
Sbjct: 171 FLSHDWPVGITDYGDSESLMRQKPYFRQEIEEKTLGSKPAALLLEKLKPQYWFSAHLHCK 230
Query: 158 YAREPYSNVDAVHVTRFLGL 177
+A D VT+FL L
Sbjct: 231 FAAAVQHGNDG-SVTKFLAL 249
>sp|Q6GPB8|DBR1A_XENLA Lariat debranching enzyme A OS=Xenopus laevis GN=dbr1-a PE=2 SV=1
Length = 534
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 40/201 (19%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL 62
Y G + PI T FIG G A L Q G+ V N++++ +G
Sbjct: 67 YYSGEKKAPILTIFIG--GNHEASNYL--------QELPYGGW-VAPNIYYMGYAGVVKY 115
Query: 63 HGLSVAYLSGRQSSEGQQFG-----TYSQDDVDA-----------LRALAEEPGIVDLFL 106
G+ + +SG S + G YS+D V + L+ L E +D+FL
Sbjct: 116 RGVRIGGISGIFKSHDYRKGHFERPPYSKDTVRSAYHVRSIEVFKLKQLKEP---MDIFL 172
Query: 107 TNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA 159
+++WP + + +L + D++ SEL+ I+P Y + V +A
Sbjct: 173 SHDWPRSIYHYGNKKQLLKKKDFFRQEVEDNTLGSPAASELLLHIQPSYWFSAHLHVKFA 232
Query: 160 --REPYSNVDAV-HVTRFLGL 177
+ +NV + T+FL L
Sbjct: 233 AFMQHQNNVGEIPKATKFLAL 253
>sp|Q9LTS7|C3H65_ARATH Zinc finger CCCH domain-containing protein 65 OS=Arabidopsis
thaliana GN=EMB1789 PE=2 SV=1
Length = 675
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 24/77 (31%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTD-----------AREQCLRG------------VCLD 297
K C ++ G C G+KC F HDT A + C++G C +
Sbjct: 354 KYCRHYL-KGRCHEGDKCKFSHDTIPETKCSPCCYFATQSCMKGDDCPFDHDLSKYPCNN 412
Query: 298 FIIKGKCEKGPECSYKH 314
FI KG C +G C + H
Sbjct: 413 FITKGFCYRGDSCLFSH 429
>sp|Q8CHP0|ZC3H3_MOUSE Zinc finger CCCH domain-containing protein 3 OS=Mus musculus
GN=Zc3h3 PE=2 SV=1
Length = 950
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 262 MCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDS 321
+C F+ G CP G KC +H +C DF +G C +G +C H Q
Sbjct: 750 VCSDFL-KGYCPLGAKCKKKHTL---------LCPDFARRGICPRGSQCQLLHRNQKRHG 799
Query: 322 QRT 324
+RT
Sbjct: 800 RRT 802
>sp|P41000|CPS3_SCHPO Protein cps3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cps3 PE=1 SV=3
Length = 583
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 265 KFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSL 316
KF G+C G+ C F HD + + + +C + KG C+ G +C+ +H L
Sbjct: 42 KFFRQGTCTSGKNCIFSHDLELATE--KTIC-KYFQKGNCKFGSKCALEHVL 90
>sp|Q7ZXW9|TISDA_XENLA Zinc finger protein 36, C3H1 type-like 2-A OS=Xenopus laevis
GN=zfp36l2-A PE=2 SV=1
Length = 363
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 314
++C F SG+C GEKC F H R +C F G C GP C + H
Sbjct: 135 ELCRPFEESGACKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIH 194
>sp|P23949|TISD_MOUSE Zinc finger protein 36, C3H1 type-like 2 OS=Mus musculus GN=Zfp36l2
PE=2 SV=1
Length = 367
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 314
++C F SG+C GEKC F H R +C F G C GP C H
Sbjct: 130 ELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRC---H 186
Query: 315 SLQNDDSQR 323
+ N D +R
Sbjct: 187 FIHNADERR 195
>sp|Q7ZWU9|DBR1B_XENLA Lariat debranching enzyme B OS=Xenopus laevis GN=dbr1-b PE=2 SV=1
Length = 533
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 39/201 (19%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL 62
Y G + PI T FIG G A L Q G+ V N++++ +G
Sbjct: 67 YYSGEKKAPILTIFIG--GNHEASNYL--------QELPYGGW-VAPNIYYMGYAGVVKY 115
Query: 63 HGLSVAYLSGRQSSEGQQFG-----TYSQDDVDA---LRALA-------EEPGIVDLFLT 107
G+ + +SG S + G Y +D V + +R++ +EP +D+FL+
Sbjct: 116 RGVRIGGISGIFKSHDYRKGHFERLPYGKDTVRSAYHVRSIEVFKLKQLKEP--MDIFLS 173
Query: 108 NEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA- 159
++WP + + +L + D++ SEL+ I+P Y + V +A
Sbjct: 174 HDWPRSIYHYGNKKQLLKKKDFFRQEVEDNTLGSPAASELLLHIQPSYWFSAHLHVKFAA 233
Query: 160 -REPYSNVDA--VHVTRFLGL 177
+ +NVD T+FL L
Sbjct: 234 FMQHQTNVDGEIPKATKFLAL 254
>sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens
GN=ZC3H4 PE=1 SV=3
Length = 1303
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKH 314
K+ K+ G C G+ CNF HD + ++ R +C F I G C + C Y H
Sbjct: 393 KVICKYFVEGRCTWGDHCNFSHDIELPKK--RELC-KFYITGFCARAENCPYMH 443
>sp|Q9C9F5|C3H15_ARATH Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis
thaliana GN=At1g68200 PE=2 SV=1
Length = 308
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 256 GGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPE 309
G ++C K+ +G+CP G+ C F H +R VC + C G
Sbjct: 221 GMTKTELCNKWQETGTCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHR 280
Query: 310 CSYKHSL 316
C ++HSL
Sbjct: 281 CHFRHSL 287
>sp|Q966M6|DBR1_CAEEL Lariat debranching enzyme OS=Caenorhabditis elegans GN=dbr-1 PE=3
SV=2
Length = 500
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 46/222 (20%)
Query: 3 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL 62
Y G + P+ T FIG G A L N G V N++++ +
Sbjct: 107 YYSGEQKAPVLTLFIG--GNHEASGYLCELPN---------GGWVAPNIYYMGFANCIRF 155
Query: 63 HGLSVAYLSGRQSSEGQQFGTY-----SQDDVDA-----------LRALAEE-----PGI 101
L +A LSG S QF Y S+ DV + LR L +
Sbjct: 156 ANLRIAGLSGIFSQGDFQFSHYERPSFSERDVKSAYHVRNVDMFRLRQLKSDNENKISNP 215
Query: 102 VDLFLTNEWPSGVTNKA------AASDMLVGISDSSNT-DSTVSELVAEIKPRYHIAGSK 154
+D+ L+++WP G+ + D+ +S + + +L+ + +PRY++A
Sbjct: 216 IDIMLSHDWPGGIPDFGDKEWLFRKKDLFEADHNSGKLGNPSGMKLIYDCRPRYYLAAHL 275
Query: 155 GV-FYAREPY--SNVDAVHVTRFLGL-APVGNKEKQKFIHAL 192
+ F A P+ S TRFL L P+ + KF+ AL
Sbjct: 276 HIAFAALVPHKGSGSGRPQPTRFLSLDKPIPGR---KFMQAL 314
>sp|Q6ZPZ3|ZC3H4_MOUSE Zinc finger CCCH domain-containing protein 4 OS=Mus musculus
GN=Zc3h4 PE=1 SV=2
Length = 1304
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKH 314
K+ K+ G C G+ CNF HD + ++ R +C F I G C + C Y H
Sbjct: 392 KVICKYFVEGRCTWGDHCNFSHDIELPKK--RELC-KFYITGFCARAENCPYMH 442
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,146,301
Number of Sequences: 539616
Number of extensions: 8870575
Number of successful extensions: 21517
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 20989
Number of HSP's gapped (non-prelim): 455
length of query: 551
length of database: 191,569,459
effective HSP length: 123
effective length of query: 428
effective length of database: 125,196,691
effective search space: 53584183748
effective search space used: 53584183748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)