Query 008855
Match_columns 551
No_of_seqs 275 out of 1237
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 13:18:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008855.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008855hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n1s_A HIT-like protein HINT; 99.7 1.7E-17 5.9E-22 147.3 7.5 100 335-434 2-108 (119)
2 3lb5_A HIT-like protein involv 99.7 5E-17 1.7E-21 151.8 9.5 103 334-436 26-134 (161)
3 3o0m_A HIT family protein; ssg 99.7 3.4E-17 1.2E-21 151.0 8.1 102 335-436 4-112 (149)
4 3imi_A HIT family protein; str 99.7 3.9E-17 1.3E-21 150.2 7.8 102 334-435 7-114 (147)
5 3p0t_A Uncharacterized protein 99.7 4.9E-17 1.7E-21 147.9 8.2 99 336-435 5-105 (138)
6 1y23_A HIT, histidine triad pr 99.7 2.5E-17 8.7E-22 150.8 5.9 101 335-436 4-111 (145)
7 4egu_A Histidine triad (HIT) p 99.7 8.9E-17 3.1E-21 142.4 8.2 100 335-434 3-109 (119)
8 3oj7_A Putative histidine tria 99.7 4.8E-17 1.6E-21 143.8 5.5 99 335-433 5-109 (117)
9 3r6f_A HIT family protein; str 99.6 1.9E-17 6.4E-22 150.2 1.9 100 335-436 5-104 (135)
10 3l7x_A SMU.412C, putative HIT- 99.6 1.1E-16 3.7E-21 151.3 6.8 102 334-435 34-141 (173)
11 3o1c_A Histidine triad nucleot 99.6 9.8E-17 3.4E-21 143.8 5.4 98 335-433 14-118 (126)
12 2oik_A Histidine triad (HIT) p 99.6 1E-15 3.5E-20 141.8 12.0 98 335-436 9-107 (154)
13 2eo4_A 150AA long hypothetical 99.6 1.9E-16 6.5E-21 145.8 6.9 98 338-435 1-104 (149)
14 3ano_A AP-4-A phosphorylase; d 99.6 1.8E-16 6.1E-21 154.8 7.0 102 335-436 68-177 (218)
15 3ksv_A Uncharacterized protein 99.6 1.9E-16 6.6E-21 146.0 6.8 101 335-436 10-117 (149)
16 1xqu_A HIT family hydrolase; p 99.6 3.2E-16 1.1E-20 144.2 4.9 100 335-434 34-140 (147)
17 1fit_A FragIle histidine prote 99.5 4.8E-14 1.7E-18 129.4 8.1 94 340-435 5-104 (147)
18 1ems_A Nitfhit, NIT-fragIle hi 99.4 3.3E-13 1.1E-17 144.9 8.5 99 335-435 296-400 (440)
19 3ohe_A Histidine triad (HIT) p 99.4 7.9E-13 2.7E-17 120.1 8.3 89 348-436 11-100 (137)
20 3i24_A HIT family hydrolase; s 99.4 9.3E-13 3.2E-17 121.3 7.9 89 348-436 11-100 (149)
21 1z84_A Galactose-1-phosphate u 99.2 1.6E-11 5.5E-16 128.2 8.4 98 336-436 214-321 (351)
22 1gup_A Galactose-1-phosphate u 99.2 1.3E-11 4.5E-16 128.7 5.7 97 336-432 194-301 (348)
23 3nrd_A Histidine triad (HIT) p 99.1 1.8E-10 6E-15 104.3 10.9 88 348-436 13-102 (135)
24 3i4s_A Histidine triad protein 99.0 1.2E-09 4.1E-14 100.5 11.0 88 348-436 16-105 (149)
25 3sp4_A Aprataxin-like protein; 98.6 2.9E-08 1E-12 95.2 6.2 84 352-435 23-127 (204)
26 3rl5_A Metallophosphoesterase 98.3 8.1E-06 2.8E-10 83.0 13.5 166 12-193 111-291 (296)
27 1z84_A Galactose-1-phosphate u 97.7 0.00028 9.6E-09 73.4 13.1 112 336-447 61-212 (351)
28 2yvt_A Hypothetical protein AQ 97.5 0.00035 1.2E-08 68.1 9.9 143 10-182 88-241 (260)
29 1uf3_A Hypothetical protein TT 97.5 0.00048 1.6E-08 65.3 10.3 138 9-181 61-208 (228)
30 1m9o_A Tristetraproline; Cys3H 96.8 0.00044 1.5E-08 55.7 2.1 58 261-318 13-76 (77)
31 3d2q_A Muscleblind-like protei 95.9 0.004 1.4E-07 49.4 2.9 54 261-317 7-65 (70)
32 2cqe_A KIAA1064 protein; CCCH 95.9 0.0054 1.9E-07 52.0 3.7 49 261-318 14-62 (98)
33 2d9n_A Cleavage and polyadenyl 94.9 0.019 6.5E-07 46.3 3.8 53 261-318 11-63 (77)
34 3bl9_A Scavenger mRNA-decappin 94.9 0.09 3.1E-06 53.0 9.5 86 348-434 149-248 (301)
35 3d2n_A Muscleblind-like protei 94.9 0.015 5E-07 47.7 3.0 55 261-318 10-67 (83)
36 3d03_A Phosphohydrolase; glyce 94.7 0.19 6.6E-06 48.5 11.2 127 10-159 70-201 (274)
37 1vlr_A MRNA decapping enzyme; 94.4 0.12 4E-06 53.0 9.0 84 350-434 198-295 (350)
38 2rpp_A Muscleblind-like protei 94.1 0.021 7.2E-07 47.4 2.3 54 261-317 18-74 (89)
39 3ib7_A ICC protein; metallopho 94.1 0.33 1.1E-05 48.3 11.5 124 10-158 99-224 (330)
40 2e5s_A Otthump00000018578; ZF- 94.0 0.013 4.3E-07 49.7 0.7 54 261-317 21-79 (98)
41 2rhk_C Cleavage and polyadenyl 93.6 0.026 9E-07 44.9 1.9 53 261-318 17-69 (72)
42 1gup_A Galactose-1-phosphate u 90.1 1.8 6E-05 44.5 11.3 97 336-435 50-174 (348)
43 2xmo_A LMO2642 protein; phosph 65.1 37 0.0013 35.0 11.3 91 62-159 188-287 (443)
44 1hp1_A 5'-nucleotidase; metall 61.0 48 0.0016 35.3 11.4 53 14-73 85-146 (516)
45 2pof_A CDP-diacylglycerol pyro 59.3 19 0.00063 34.7 6.8 89 368-460 47-145 (227)
46 1m9o_A Tristetraproline; Cys3H 55.7 2.4 8.3E-05 33.3 0.0 24 261-284 51-74 (77)
47 2fc6_A Nuclear, target of EGR1 54.2 3.2 0.00011 30.3 0.4 26 259-284 19-44 (50)
48 3tho_B Exonuclease, putative; 50.9 18 0.00062 37.0 5.8 124 12-158 79-215 (379)
49 2d9m_A Zinc finger CCCH-type d 48.2 4.7 0.00016 31.6 0.6 28 261-289 21-48 (69)
50 2cqe_A KIAA1064 protein; CCCH 47.4 5.8 0.0002 33.1 1.0 25 261-285 37-61 (98)
51 1ute_A Protein (II purple acid 44.6 19 0.00064 34.7 4.4 149 11-181 82-243 (313)
52 2q8u_A Exonuclease, putative; 42.4 9.1 0.00031 38.3 1.8 127 12-159 97-234 (336)
53 2fc6_A Nuclear, target of EGR1 36.3 14 0.00046 27.0 1.4 27 291-317 19-45 (50)
54 3ive_A Nucleotidase; structura 35.9 36 0.0012 36.3 5.3 53 13-73 86-149 (509)
55 2rpp_A Muscleblind-like protei 35.4 18 0.00061 29.6 2.2 26 292-318 17-43 (89)
56 2nxf_A Putative dimetal phosph 35.3 81 0.0028 30.0 7.5 83 83-180 200-286 (322)
57 3d2n_A Muscleblind-like protei 32.5 22 0.00076 28.6 2.3 26 292-318 9-35 (83)
58 3d2q_A Muscleblind-like protei 29.0 22 0.00076 27.4 1.6 25 293-318 7-32 (70)
59 2e5s_A Otthump00000018578; ZF- 27.4 15 0.00051 30.6 0.4 33 261-295 57-89 (98)
60 3ck2_A Conserved uncharacteriz 27.2 1.1E+02 0.0039 26.9 6.5 60 100-182 76-135 (176)
61 4h1s_A 5'-nucleotidase; hydrol 26.9 50 0.0017 35.3 4.5 52 15-73 87-152 (530)
62 4h2g_A 5'-nucleotidase; dimer, 25.2 50 0.0017 35.6 4.1 55 14-73 108-174 (546)
63 3jyf_A 2',3'-cyclic nucleotide 24.3 83 0.0028 31.7 5.4 53 14-73 95-165 (339)
64 3t1i_A Double-strand break rep 22.0 89 0.003 32.8 5.2 22 3-24 131-152 (431)
65 3qfk_A Uncharacterized protein 20.1 93 0.0032 33.2 5.0 130 14-159 103-253 (527)
No 1
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.70 E-value=1.7e-17 Score=147.30 Aligned_cols=100 Identities=18% Similarity=0.171 Sum_probs=77.7
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH-----hc
Q 008855 335 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-----NQ 409 (551)
Q Consensus 335 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~-----~~ 409 (551)
.++|+||.+..+.....||++++++++++|..|.++||+||||++|+.++.+|+++++.++..+.+.+++..+ ..
T Consensus 2 ~~~CiFC~I~~ge~~~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 81 (119)
T 3n1s_A 2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAED 81 (119)
T ss_dssp CCCCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCCChhhhhhcCCCcCCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3579999864332234689999999999999999999999999999999999999976666665554444433 35
Q ss_pred CCceEEEE--ecCCCCCeeEEEEEecC
Q 008855 410 GKEAVFFE--WLSKRGTHANLQAVPIP 434 (551)
Q Consensus 410 g~~~v~~E--~~~~~~~H~HihvVPvp 434 (551)
|++++++. .+++.++|+|+||||+.
T Consensus 82 g~ni~~n~g~~agq~V~HlH~Hiipr~ 108 (119)
T 3n1s_A 82 GYRLIMNTNRHGGQEVYHIHMHLLGGR 108 (119)
T ss_dssp CEEEEEEEHHHHTCCSSSCCEEEEESS
T ss_pred CeEEEEeCCCCcCCCcCEEEEEEeCCc
Confidence 66777666 34455799999999973
No 2
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.69 E-value=5e-17 Score=151.83 Aligned_cols=103 Identities=14% Similarity=0.097 Sum_probs=84.1
Q ss_pred CCCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHH----Hhc
Q 008855 334 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYY----KNQ 409 (551)
Q Consensus 334 ~~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~----~~~ 409 (551)
..++|+||.+..+.....||++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+ ...
T Consensus 26 ~~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~ 105 (161)
T 3lb5_A 26 YDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQAD 105 (161)
T ss_dssp CCTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3568999997544334568999999999999999999999999999999999999999999998877766654 456
Q ss_pred CCceEEEE--ecCCCCCeeEEEEEecCcc
Q 008855 410 GKEAVFFE--WLSKRGTHANLQAVPIPTS 436 (551)
Q Consensus 410 g~~~v~~E--~~~~~~~H~HihvVPvp~~ 436 (551)
|++++++. .+++.+.|+|+||||+...
T Consensus 106 g~ni~~n~g~~aGq~V~HlHiHiiPR~~~ 134 (161)
T 3lb5_A 106 GITVMQFNEAASQQTVYHLHFHIIPRMEG 134 (161)
T ss_dssp EEEEEEEESGGGTCCSCSCCEEEEEECTT
T ss_pred CEEEEEecCcccCCCCCEEEEEEEcccCC
Confidence 77777666 2344478999999998543
No 3
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.68 E-value=3.4e-17 Score=151.00 Aligned_cols=102 Identities=21% Similarity=0.309 Sum_probs=82.0
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----
Q 008855 335 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----- 409 (551)
Q Consensus 335 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~~----- 409 (551)
.++|+||.+........||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.++..
T Consensus 4 m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (149)
T 3o0m_A 4 SMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHAD 83 (149)
T ss_dssp TTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCS
T ss_pred CCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 568999987543333568999999999999999999999999999999999999999999999999888877654
Q ss_pred CCceEEEE-e-cCCCCCeeEEEEEecCcc
Q 008855 410 GKEAVFFE-W-LSKRGTHANLQAVPIPTS 436 (551)
Q Consensus 410 g~~~v~~E-~-~~~~~~H~HihvVPvp~~ 436 (551)
|++++++. . +++.+.|+|+||||+...
T Consensus 84 ~~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 112 (149)
T 3o0m_A 84 GNNIAINDGKAAFQTVFHIHLHVVPRRNG 112 (149)
T ss_dssp EEEEECCCSGGGTCCSSSCCEEEEEECTT
T ss_pred ceEEEEecCCCCCCccceEEEEEECCccC
Confidence 33333333 1 233468999999997543
No 4
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.68 E-value=3.9e-17 Score=150.23 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=82.9
Q ss_pred CCCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hc
Q 008855 334 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQ 409 (551)
Q Consensus 334 ~~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~ 409 (551)
..++|+||.+..+.....||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+. ..
T Consensus 7 ~m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~ 86 (147)
T 3imi_A 7 TADNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNPV 86 (147)
T ss_dssp CGGGCHHHHHHTTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHCCS
T ss_pred ccCCCcCcccccCCCcCCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45689999875432234589999999999999999999999999999999999999999999888777666544 45
Q ss_pred CCceEEEE--ecCCCCCeeEEEEEecCc
Q 008855 410 GKEAVFFE--WLSKRGTHANLQAVPIPT 435 (551)
Q Consensus 410 g~~~v~~E--~~~~~~~H~HihvVPvp~ 435 (551)
|++++++. .+++.++|+|+||||+..
T Consensus 87 ~~ni~~n~g~~aGq~v~HlHiHiiPR~~ 114 (147)
T 3imi_A 87 GFNLLNNNGEKAGQTVFHFHLHLIPRYG 114 (147)
T ss_dssp EEEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred CEEEEEeCCcccCCCcCEEEEEEeCCcc
Confidence 66776666 234447999999999864
No 5
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.68 E-value=4.9e-17 Score=147.88 Aligned_cols=99 Identities=13% Similarity=0.081 Sum_probs=81.0
Q ss_pred CCCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCce
Q 008855 336 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 413 (551)
Q Consensus 336 ~~C~FC~~~-~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~ 413 (551)
.+|+||.+. .+.+. .||+++++++++++..|.++||+||||++|+.++.+|+++++.+|....+.+.+.+.. .+..-
T Consensus 5 ~~CiFC~i~~~e~p~-~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~ 83 (138)
T 3p0t_A 5 MASIFTKIINRELPG-RFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTER 83 (138)
T ss_dssp HHHHHHHHHTTSSCC-CEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred CCChhhHHhcCCCCc-CEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 469999864 34444 5889999999999999999999999999999999999999999999998888876653 45443
Q ss_pred EEEEecCCCCCeeEEEEEecCc
Q 008855 414 VFFEWLSKRGTHANLQAVPIPT 435 (551)
Q Consensus 414 v~~E~~~~~~~H~HihvVPvp~ 435 (551)
+.+..+++.++|+|+|+||+..
T Consensus 84 ~n~~~~gq~v~HlH~HiiPr~~ 105 (138)
T 3p0t_A 84 SGLIIAGLEVPHLHVHVFPTRS 105 (138)
T ss_dssp EEEEECCSSCSSCCEEEEEESC
T ss_pred CcEEECCcccCEEEEEEecccc
Confidence 4444345557999999999854
No 6
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.67 E-value=2.5e-17 Score=150.78 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=80.8
Q ss_pred CCCCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hc
Q 008855 335 SKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQ 409 (551)
Q Consensus 335 ~~~C~FC~~~-~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~ 409 (551)
+++|+||.+. .+.+ ..||+++++++++++++|..+||+||||++|+.++.+|+++++.+|....+.+.+.+. ..
T Consensus 4 ~~~C~fC~i~~~e~~-~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~ 82 (145)
T 1y23_A 4 AENCIFCKIIAGDIP-SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPI 82 (145)
T ss_dssp -CCCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCS
T ss_pred CCCCcCCccccCCCC-CCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4679999864 3333 4688999999999999999999999999999999999999999998877666655544 45
Q ss_pred CCceEEEE--ecCCCCCeeEEEEEecCcc
Q 008855 410 GKEAVFFE--WLSKRGTHANLQAVPIPTS 436 (551)
Q Consensus 410 g~~~v~~E--~~~~~~~H~HihvVPvp~~ 436 (551)
|++++++. ..++...|+|+||||+...
T Consensus 83 ~~ni~~n~g~~~g~~v~HlH~HiiPr~~~ 111 (145)
T 1y23_A 83 GLNTLNNNGEKAGQSVFHYHMHIIPRYGK 111 (145)
T ss_dssp EEEEEEEESGGGTCCSSSCCEEEEEECST
T ss_pred CEEEEEcCCcCCCCCcCEEEEEEEccccC
Confidence 67777766 2334478999999997643
No 7
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.67 E-value=8.9e-17 Score=142.40 Aligned_cols=100 Identities=13% Similarity=0.150 Sum_probs=76.4
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHH---HHHHH--HHhc
Q 008855 335 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQN---SLMMY--YKNQ 409 (551)
Q Consensus 335 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~---~L~~~--~~~~ 409 (551)
..+|+||.+..+.....||++++++++++|..|.++||+||||++|+.++.+|+++++.++..+.+ .+.+. +...
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~~ 82 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQT 82 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 357999987443333568999999999999999999999999999999999999886555554444 44433 2345
Q ss_pred CCceEEEE-e-cCCCCCeeEEEEEecC
Q 008855 410 GKEAVFFE-W-LSKRGTHANLQAVPIP 434 (551)
Q Consensus 410 g~~~v~~E-~-~~~~~~H~HihvVPvp 434 (551)
|++++++. . +++...|+|+|+||..
T Consensus 83 ~~ni~~n~g~~agq~v~HlH~Hiip~~ 109 (119)
T 4egu_A 83 GFRVINNCGSDGGQEVKHLHYHILAGK 109 (119)
T ss_dssp CEEEEEEETTTTTCCSCSCCEEEEESS
T ss_pred CEEEEEeCCCCCCCCcCEEEEEEeCCc
Confidence 77777766 2 3344689999999974
No 8
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.66 E-value=4.8e-17 Score=143.79 Aligned_cols=99 Identities=19% Similarity=0.256 Sum_probs=74.5
Q ss_pred CCC-CcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---cC
Q 008855 335 SKE-CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN---QG 410 (551)
Q Consensus 335 ~~~-C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~---~g 410 (551)
+++ |+||.+..+.....||++++++++++|..|..+||+||||++|+.++.+|+++++.++..+.+.+++..+. .|
T Consensus 5 m~~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~g 84 (117)
T 3oj7_A 5 MADSCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECPEG 84 (117)
T ss_dssp ----CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCCcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 345 99998754333456999999999999999999999999999999999999988777777666655554442 25
Q ss_pred CceEEEE-e-cCCCCCeeEEEEEec
Q 008855 411 KEAVFFE-W-LSKRGTHANLQAVPI 433 (551)
Q Consensus 411 ~~~v~~E-~-~~~~~~H~HihvVPv 433 (551)
++++++. . +++...|+|+|+||+
T Consensus 85 ~ni~~n~g~~agq~v~H~H~Hiipr 109 (117)
T 3oj7_A 85 YRVVNNIGEDAGQTVKHIHFHILGG 109 (117)
T ss_dssp EEEECCCSTTTTCCSSSCCEEEEES
T ss_pred eEEEEcCCCCCCeeeeEEEEEEeCC
Confidence 5555444 2 233468999999996
No 9
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.65 E-value=1.9e-17 Score=150.23 Aligned_cols=100 Identities=18% Similarity=0.250 Sum_probs=83.5
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCceE
Q 008855 335 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 414 (551)
Q Consensus 335 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~~g~~~v 414 (551)
.++|+||.+.. . ...||++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+...+++++
T Consensus 5 ~~~C~fC~i~~-~-~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~~~~~~ni~ 82 (135)
T 3r6f_A 5 MEGCIFCTLYR-K-GANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKFGFERYNIL 82 (135)
T ss_dssp -CCCHHHHHHH-H-CCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCCcCccccc-C-CceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 56899998754 2 345889999999999999999999999999999999999999999999999999988877776665
Q ss_pred EEEecCCCCCeeEEEEEecCcc
Q 008855 415 FFEWLSKRGTHANLQAVPIPTS 436 (551)
Q Consensus 415 ~~E~~~~~~~H~HihvVPvp~~ 436 (551)
++...++..+|+|+|+||+...
T Consensus 83 ~n~g~gq~v~HlH~HiiPR~~~ 104 (135)
T 3r6f_A 83 QNNGNHQEVFHVHFHVIPFVSA 104 (135)
T ss_dssp CCSSSSCSSSSCCEEEEECCBT
T ss_pred EEcCCCCCccEEEEEEeccccC
Confidence 5442233468999999998654
No 10
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.65 E-value=1.1e-16 Score=151.26 Aligned_cols=102 Identities=21% Similarity=0.202 Sum_probs=82.1
Q ss_pred CCCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hc
Q 008855 334 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQ 409 (551)
Q Consensus 334 ~~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~ 409 (551)
..++|+||.+........||++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+. ..
T Consensus 34 ~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~ 113 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATKAD 113 (173)
T ss_dssp CCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCS
T ss_pred CCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 36789999875432234689999999999999999999999999999999999999999999877766665544 45
Q ss_pred CCceEEEE--ecCCCCCeeEEEEEecCc
Q 008855 410 GKEAVFFE--WLSKRGTHANLQAVPIPT 435 (551)
Q Consensus 410 g~~~v~~E--~~~~~~~H~HihvVPvp~ 435 (551)
|++++++. .+++.++|+|+||||+..
T Consensus 114 g~ni~~n~g~~aGq~V~HlHiHiIPR~~ 141 (173)
T 3l7x_A 114 GLNIINNNEETAGQTVFHAHVHLVPRFA 141 (173)
T ss_dssp EEEEEECCSGGGTCCSCSCCEEEEEECC
T ss_pred CEEEEEecCcccCCCcCEEEEEEEeccc
Confidence 66666655 233447899999999854
No 11
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.64 E-value=9.8e-17 Score=143.77 Aligned_cols=98 Identities=17% Similarity=0.122 Sum_probs=75.6
Q ss_pred CCCCcccCCCC-CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----c
Q 008855 335 SKECWFCLSSP-SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----Q 409 (551)
Q Consensus 335 ~~~C~FC~~~~-~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~ 409 (551)
.++|.||.+.. +.+ ..||++++++++++|..|.++||+||||++|+.++.+|+++++.++..+.+.++++.+. .
T Consensus 14 ~~~CiFC~i~~~e~~-~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~~ 92 (126)
T 3o1c_A 14 GGDTIFGKIIRKEIP-AKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKK 92 (126)
T ss_dssp TCSSHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCCCcchhhcCCCc-CCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 56899998643 344 46889999999999999999999999999999999999988766666655444444332 4
Q ss_pred CCceEEEE--ecCCCCCeeEEEEEec
Q 008855 410 GKEAVFFE--WLSKRGTHANLQAVPI 433 (551)
Q Consensus 410 g~~~v~~E--~~~~~~~H~HihvVPv 433 (551)
|++++++. .+++.+.|+|+||||+
T Consensus 93 g~ni~~n~g~~agq~v~HlH~Hiipr 118 (126)
T 3o1c_A 93 GYRMVVNEGSDGGQSVYHVHLHVLGG 118 (126)
T ss_dssp CEEEECCCHHHHTCCSSSCCEEEEES
T ss_pred CeEEEEecCCccCCccCEeEEEEeCC
Confidence 56665544 2344578999999996
No 12
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.63 E-value=1e-15 Score=141.77 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=78.1
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCce
Q 008855 335 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 413 (551)
Q Consensus 335 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~ 413 (551)
.++|+||.+. ...||+++++++++++++|..+||+||||++|+.++.+|+++++.+|....+.+.+.++. .+..-
T Consensus 9 ~~~C~FC~~~----~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g 84 (154)
T 2oik_A 9 HKNCELCTTA----GGEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDK 84 (154)
T ss_dssp CTTCHHHHSC----CSEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CCCCccCCCC----CCeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4579999754 346899999999999999999999999999999999999999999998887777766653 23222
Q ss_pred EEEEecCCCCCeeEEEEEecCcc
Q 008855 414 VFFEWLSKRGTHANLQAVPIPTS 436 (551)
Q Consensus 414 v~~E~~~~~~~H~HihvVPvp~~ 436 (551)
+.+...++...|+|+||||+...
T Consensus 85 ~ni~~~gq~v~HlHiHiiPr~~~ 107 (154)
T 2oik_A 85 INLASLGNMTPHVHWHVIPRFKR 107 (154)
T ss_dssp EEEEECCSSSCSCEEEEEEECTT
T ss_pred EEhHHhCCCCCEEEEEEeCCCCC
Confidence 22222445578999999998653
No 13
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.63 E-value=1.9e-16 Score=145.82 Aligned_cols=98 Identities=21% Similarity=0.252 Sum_probs=78.9
Q ss_pred CcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCce
Q 008855 338 CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKEA 413 (551)
Q Consensus 338 C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~g~~~ 413 (551)
|+||.+........||++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+.. .|+++
T Consensus 1 CiFC~i~~~e~~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni 80 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLRL 80 (149)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CcCcccccCCCCccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 99998643322346889999999999999999999999999999999999999999999888877766653 45555
Q ss_pred EEEE--ecCCCCCeeEEEEEecCc
Q 008855 414 VFFE--WLSKRGTHANLQAVPIPT 435 (551)
Q Consensus 414 v~~E--~~~~~~~H~HihvVPvp~ 435 (551)
+++. ..++...|+|+||||+..
T Consensus 81 ~~n~g~~~gq~v~HlHiHviPr~~ 104 (149)
T 2eo4_A 81 LTNIGRSAGQVIFHLHVHIIPTWE 104 (149)
T ss_dssp ECCCSGGGTCCSCSCCEEEEEECS
T ss_pred EEecCcCCCCCcCEEEEEEECCcC
Confidence 5444 223446899999999753
No 14
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.8e-16 Score=154.83 Aligned_cols=102 Identities=22% Similarity=0.182 Sum_probs=82.8
Q ss_pred CCCCcccCCCCC-CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----c
Q 008855 335 SKECWFCLSSPS-VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----Q 409 (551)
Q Consensus 335 ~~~C~FC~~~~~-~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~ 409 (551)
.++|+||.+... .....||+++++++++++++|+++||+||||++|+.++.+|+++++.+|..+.+.+.+.++. .
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~ 147 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPH 147 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 457999987644 24567999999999999999999999999999999999999999999999888877766654 4
Q ss_pred CCceEEEE-ec-CCCC-CeeEEEEEecCcc
Q 008855 410 GKEAVFFE-WL-SKRG-THANLQAVPIPTS 436 (551)
Q Consensus 410 g~~~v~~E-~~-~~~~-~H~HihvVPvp~~ 436 (551)
|++++++. .. ++.+ .|+|+||||+...
T Consensus 148 g~ni~~n~G~~aGq~V~~HlHiHIIPR~~g 177 (218)
T 3ano_A 148 GFNVGLNLGTSAGGSLAEHLHVHVVPRWGG 177 (218)
T ss_dssp EEEEEEEESGGGTCTTTTSCCEEEEEECTT
T ss_pred CEEEEEecCcccCCcccCEEEEEEEcccCC
Confidence 56666665 23 3345 8999999998654
No 15
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.63 E-value=1.9e-16 Score=146.05 Aligned_cols=101 Identities=17% Similarity=0.223 Sum_probs=82.8
Q ss_pred CCCCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----c
Q 008855 335 SKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----Q 409 (551)
Q Consensus 335 ~~~C~FC~~~-~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~ 409 (551)
..+|+||.+. .+.+. .+|++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+.. .
T Consensus 10 ~~~~iFc~Ii~geip~-~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~ 88 (149)
T 3ksv_A 10 AANCIFCKIIKGDIPC-AKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSM 88 (149)
T ss_dssp CTTCHHHHHHHTSSCC-CEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCC
T ss_pred cccCHHHHHHcCCCCc-cEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 3589999875 34454 5889999999999999999999999999999999999999999999999988888764 3
Q ss_pred CCceEEEE--ecCCCCCeeEEEEEecCcc
Q 008855 410 GKEAVFFE--WLSKRGTHANLQAVPIPTS 436 (551)
Q Consensus 410 g~~~v~~E--~~~~~~~H~HihvVPvp~~ 436 (551)
|++++++. .+++.++|+|+|+||+...
T Consensus 89 g~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 117 (149)
T 3ksv_A 89 QYNVLQNNGSLAHQEVPHVHFHIIPKTDE 117 (149)
T ss_dssp EEEEEECCSTTTTCCSSSCCEEEEEECCT
T ss_pred CEEEEEecCcccCCCCCEEEEEEEecccC
Confidence 45555444 2233468999999998654
No 16
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.60 E-value=3.2e-16 Score=144.20 Aligned_cols=100 Identities=17% Similarity=0.131 Sum_probs=76.9
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----
Q 008855 335 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----- 409 (551)
Q Consensus 335 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~~----- 409 (551)
.++|+||.+........||++++++++++|++|..+||+||||++|+.++.+|+++++.++..+.+.++++.+..
T Consensus 34 m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 113 (147)
T 1xqu_A 34 LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEK 113 (147)
T ss_dssp CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 468999987443234579999999999999999999999999999999999999888777777766555555543
Q ss_pred CCceEEEE-ec-CCCCCeeEEEEEecC
Q 008855 410 GKEAVFFE-WL-SKRGTHANLQAVPIP 434 (551)
Q Consensus 410 g~~~v~~E-~~-~~~~~H~HihvVPvp 434 (551)
|++++++. .. ++...|+|+||||..
T Consensus 114 gyni~~n~g~~aGq~v~HlHlHiiP~~ 140 (147)
T 1xqu_A 114 GYRLITNCGVAAGQTVFHLHYHLLGGV 140 (147)
T ss_dssp CEEEECCCSTTTTCCSCSCCEEEEESS
T ss_pred CEEEEEecCcccCCCccEEEEEEeCCC
Confidence 44444443 12 234689999999973
No 17
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.48 E-value=4.8e-14 Score=129.38 Aligned_cols=94 Identities=15% Similarity=0.214 Sum_probs=75.7
Q ss_pred ccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCceEE
Q 008855 340 FCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKEAVF 415 (551)
Q Consensus 340 FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~g~~~v~ 415 (551)
||.. .++...||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+.. .|+++++
T Consensus 5 f~~~--~ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~ 82 (147)
T 1fit_A 5 FGQH--LIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSM 82 (147)
T ss_dssp ETTE--EECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred ecCc--ccCCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5543 245567899999999999999999999999999999999999999999999888877776653 4555555
Q ss_pred EE--ecCCCCCeeEEEEEecCc
Q 008855 416 FE--WLSKRGTHANLQAVPIPT 435 (551)
Q Consensus 416 ~E--~~~~~~~H~HihvVPvp~ 435 (551)
+. .+++.+.|+|+||||+..
T Consensus 83 n~g~~agq~v~HlH~HiiPr~~ 104 (147)
T 1fit_A 83 QDGPEAGQTVKHVHVHVLPRKA 104 (147)
T ss_dssp CCSGGGTCCSSSCCEEEEEECT
T ss_pred ecCCccCCCccEEEEEEECCcC
Confidence 44 223446899999999754
No 18
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.39 E-value=3.3e-13 Score=144.89 Aligned_cols=99 Identities=13% Similarity=0.148 Sum_probs=80.5
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cC
Q 008855 335 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QG 410 (551)
Q Consensus 335 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~g 410 (551)
...|.||. .+.+...||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+.. .|
T Consensus 296 ~~~c~fc~--~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~ 373 (440)
T 1ems_A 296 TGGLKFAR--FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTS 373 (440)
T ss_dssp SSCCEETT--EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred cCceeeec--cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 56899997 2345567899999999999999999999999999999999999999999999888888777653 34
Q ss_pred CceEEEE--ecCCCCCeeEEEEEecCc
Q 008855 411 KEAVFFE--WLSKRGTHANLQAVPIPT 435 (551)
Q Consensus 411 ~~~v~~E--~~~~~~~H~HihvVPvp~ 435 (551)
++++++. ..++.+.|+|+||||+..
T Consensus 374 ~n~~~~~g~~~gq~v~HlH~Hiipr~~ 400 (440)
T 1ems_A 374 TTICVQDGKDAGQTVPHVHIHILPRRA 400 (440)
T ss_dssp EEEECCCSGGGTCCSSSCCEEEEEECS
T ss_pred eEEEEecCCCCCCCccEEEEEEeCCCC
Confidence 4444443 223346899999999753
No 19
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.37 E-value=7.9e-13 Score=120.10 Aligned_cols=89 Identities=11% Similarity=-0.035 Sum_probs=73.3
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCee
Q 008855 348 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 426 (551)
Q Consensus 348 ~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 426 (551)
...++|++++.|++.|.+.|..+||+||+|++|+.++.+++++++.++......+.+.+++ .|.+.+.+..+++.++|+
T Consensus 11 ~d~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~Hl 90 (137)
T 3ohe_A 11 ADTHKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVAALGNMVPQL 90 (137)
T ss_dssp HHEEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSSCCSC
T ss_pred cccEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeccCcCCEE
Confidence 3568999999999999999999999999999999999999999999888887777766553 454433333355668999
Q ss_pred EEEEEecCcc
Q 008855 427 NLQAVPIPTS 436 (551)
Q Consensus 427 HihvVPvp~~ 436 (551)
|+||||+...
T Consensus 91 H~HviPR~~~ 100 (137)
T 3ohe_A 91 HLHHIVRYQG 100 (137)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCCCC
Confidence 9999998643
No 20
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.36 E-value=9.3e-13 Score=121.29 Aligned_cols=89 Identities=9% Similarity=0.049 Sum_probs=73.4
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCee
Q 008855 348 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 426 (551)
Q Consensus 348 ~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 426 (551)
+..++|++++.|+++|++.|..+||+||+|++|+.++.+|+++++.++......+.+.+++ .+.+.+.+..+++.++|+
T Consensus 11 ~d~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~~aGq~V~Hl 90 (149)
T 3i24_A 11 QDCIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIGALGNLVPQL 90 (149)
T ss_dssp HHEEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEECCSSCCSC
T ss_pred cCCEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEhhhhCCCCEE
Confidence 3567999999999999999999999999999999999999999998888887777766553 455444444455557999
Q ss_pred EEEEEecCcc
Q 008855 427 NLQAVPIPTS 436 (551)
Q Consensus 427 HihvVPvp~~ 436 (551)
|+||||+...
T Consensus 91 H~HvIPR~~~ 100 (149)
T 3i24_A 91 HIHHIARFTT 100 (149)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCccC
Confidence 9999998653
No 21
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.21 E-value=1.6e-11 Score=128.20 Aligned_cols=98 Identities=16% Similarity=0.235 Sum_probs=78.1
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hcCC
Q 008855 336 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQGK 411 (551)
Q Consensus 336 ~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~g~ 411 (551)
.+|+||.+... .+||++++++++++|..|..+||+||||++|+.++.+|+++++.+|..+.+.+.+.+. ..|+
T Consensus 214 ~~ciFc~ii~~---E~iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~y 290 (351)
T 1z84_A 214 GKCCLCEAKSK---HFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPY 290 (351)
T ss_dssp SSCTTTTHHHH---SEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCHHHHHHhc---CeEEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 57999986422 2299999999999999999999999999999999999999999999988886655443 3466
Q ss_pred ceEEEE-ecCC-----CCCeeEEEEEecCcc
Q 008855 412 EAVFFE-WLSK-----RGTHANLQAVPIPTS 436 (551)
Q Consensus 412 ~~v~~E-~~~~-----~~~H~HihvVPvp~~ 436 (551)
+++++. ..++ ...|+|+|+||+-+.
T Consensus 291 n~~~n~gp~~g~~~~q~v~HlHiHiiPR~~~ 321 (351)
T 1z84_A 291 NYMIHTSPLKVTESQLPYTHWFLQIVPQLSG 321 (351)
T ss_dssp EEEEECCCTTCCGGGGGGCCCEEEEEECCCC
T ss_pred EEEEeCCCccCCCCCCccceEEEEEEccCCC
Confidence 666665 2222 357999999997543
No 22
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.17 E-value=1.3e-11 Score=128.72 Aligned_cols=97 Identities=12% Similarity=0.067 Sum_probs=76.0
Q ss_pred CCCcccCCCCC-CC-cceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hc
Q 008855 336 KECWFCLSSPS-VE-SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQ 409 (551)
Q Consensus 336 ~~C~FC~~~~~-~~-~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~ 409 (551)
++|.||.+... .+ ...||++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+. ..
T Consensus 194 ~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~ 273 (348)
T 1gup_A 194 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCS 273 (348)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 68999986422 22 23688999999999999999999999999999999999999999999977766665544 32
Q ss_pred -CCceEEEEe-cC---CCCCeeEEEEEe
Q 008855 410 -GKEAVFFEW-LS---KRGTHANLQAVP 432 (551)
Q Consensus 410 -g~~~v~~E~-~~---~~~~H~HihvVP 432 (551)
+++++++-. .+ +...|+|+||||
T Consensus 274 ~~Yn~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 274 FPYSMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp CCEEEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred CCeEEEEEeCCCCCCCCcccEEEEEEec
Confidence 556565551 12 235799999999
No 23
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.15 E-value=1.8e-10 Score=104.33 Aligned_cols=88 Identities=10% Similarity=0.059 Sum_probs=69.0
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEec-cccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCe
Q 008855 348 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPV-EHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTH 425 (551)
Q Consensus 348 ~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~-~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H 425 (551)
+...+|++++.|++.|...|..+| .||||+ +|+.++.+|+++++.++......+.+.++. .+.+-+.+..+++.++|
T Consensus 13 ~~~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~H 91 (135)
T 3nrd_A 13 RDGIPIGTLGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGALGNIVRQ 91 (135)
T ss_dssp HHEEEEEECSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCS
T ss_pred cCCEEEEECCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccCCCCE
Confidence 346799999999999999999995 577787 799999999999988888887777766553 34443333435555799
Q ss_pred eEEEEEecCcc
Q 008855 426 ANLQAVPIPTS 436 (551)
Q Consensus 426 ~HihvVPvp~~ 436 (551)
+|+||||+...
T Consensus 92 lH~HviPR~~~ 102 (135)
T 3nrd_A 92 LHVHVIARREG 102 (135)
T ss_dssp CCEEEEEECTT
T ss_pred EEEEEecCCCC
Confidence 99999998543
No 24
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.02 E-value=1.2e-09 Score=100.46 Aligned_cols=88 Identities=10% Similarity=0.017 Sum_probs=69.5
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEecc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCe
Q 008855 348 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE-HVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTH 425 (551)
Q Consensus 348 ~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~-H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H 425 (551)
...+++.+...++|.+...| +.+|+||||++ |+.++.+|+++++.+++...+.+.+.++. .+.+.+.+..+++.++|
T Consensus 16 ~d~~~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~~aGq~V~H 94 (149)
T 3i4s_A 16 EDTIDIGDLPLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIAALGNLVPQ 94 (149)
T ss_dssp HHEEEEEECSSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCS
T ss_pred hCCEEEEEcCceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeecCCcCCE
Confidence 45678999999999998544 67799999999 99999999999999999888887777653 34433333335556899
Q ss_pred eEEEEEecCcc
Q 008855 426 ANLQAVPIPTS 436 (551)
Q Consensus 426 ~HihvVPvp~~ 436 (551)
+|+||||+...
T Consensus 95 lH~HvIPR~~~ 105 (149)
T 3i4s_A 95 LHVHIIARRTG 105 (149)
T ss_dssp CCEEEEEECTT
T ss_pred EEEEEECCcCC
Confidence 99999998653
No 25
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=98.63 E-value=2.9e-08 Score=95.24 Aligned_cols=84 Identities=6% Similarity=0.056 Sum_probs=61.2
Q ss_pred EEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCC------HHHHHHHHHHHH-H-HHHHHHh-----------cCC-
Q 008855 352 IVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTS------PECEKELGRFQN-S-LMMYYKN-----------QGK- 411 (551)
Q Consensus 352 Ivs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~------~e~~~Ei~~~~~-~-L~~~~~~-----------~g~- 411 (551)
||++++.++++++++|.++||+||||++|+.++..+. .++..+|..+.. . |.+++.. .|+
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 8999999999999999999999999999999988653 356777777766 5 5555531 121
Q ss_pred ceEEEE-ecCCCCCeeEEEEEecCc
Q 008855 412 EAVFFE-WLSKRGTHANLQAVPIPT 435 (551)
Q Consensus 412 ~~v~~E-~~~~~~~H~HihvVPvp~ 435 (551)
..+-+. .+.....|+|+|||-.+.
T Consensus 103 ~~i~~GfHa~PSm~HLHLHVIS~Df 127 (204)
T 3sp4_A 103 NYIKVGFHAGPSMNNLHLHIMTLDH 127 (204)
T ss_dssp TTEEEEEESSCSSSSCCEEEEESCC
T ss_pred eeEeccCCCCCcccceeEEEeccCC
Confidence 122222 233346899999998653
No 26
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=98.25 E-value=8.1e-06 Score=83.02 Aligned_cols=166 Identities=13% Similarity=0.081 Sum_probs=97.1
Q ss_pred ceEEEecCCCCCh--HHHHHHhhcccc-------cCCCc--cCCceeccCeEEecCCceeEECCeEEEEEccccCCCCCc
Q 008855 12 IPTYFIGDYGVGA--AKVLLAASKNSA-------NQGFK--MDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQ 80 (551)
Q Consensus 12 ipTyfigg~~~~~--~~~~~~~~~~~~-------~~~~~--~~g~~v~~Nl~yLg~~gv~~~~GLrIa~lsG~~~~~~~~ 80 (551)
.++|++.|||+.. ..+++.+..... +.... .+-..+-.|++||.. +++++.||||.+..+.-.....
T Consensus 111 ~~v~~V~GNHD~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~-~~~~i~Gl~i~Gsp~tP~~~~~- 188 (296)
T 3rl5_A 111 EYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD-SEVTVKGFRIYGAPWTPWFNGW- 188 (296)
T ss_dssp SEEEECCCTTCGGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS-EEEEETTEEEEEECCBCC--CC-
T ss_pred CeEEEEcCCcccccchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC-CcEEECCEEEEEecCCCCCCCc-
Confidence 3589999999984 223333310000 00000 011234578999988 5667899999986554211111
Q ss_pred CCCCCHHHHHHHHHhhcCCCCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHH-HhcCCCcEEeccCCceee
Q 008855 81 FGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV-AEIKPRYHIAGSKGVFYA 159 (551)
Q Consensus 81 ~~~~~~~dv~~l~~~~~~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~-~~lkPrYhFa~~~~~fyE 159 (551)
...|++.+ ..+........++||||||..|.++...... .....|+..+.+++ ...+|+||+.||-|.-+.
T Consensus 189 ~f~~~~~~-~~~~~~~~ip~~~dILvTH~PP~g~~D~~~~-------~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~ 260 (296)
T 3rl5_A 189 GFNLPRGQ-SLLDKWNLIPEGTDILMTHGPPLGFRDWVPK-------ELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYG 260 (296)
T ss_dssp TTBCCTTH-HHHHHHTTSCTTCSEEEESSCBTTSSCEEGG-------GTEECSBHHHHHHHHHTTCCSEEEECSCGGGCE
T ss_pred CCCcchHH-HHHHHHhhCCCCCeEEEECCCcccccccccc-------ccCcCChHHHHHHHHHhcCCCEEEECCccCCCc
Confidence 11233222 2222233345689999999999998432110 01247999999888 699999999999776543
Q ss_pred ccccccCCCCceeEEEeccCCCCc---ccceEEEEec
Q 008855 160 REPYSNVDAVHVTRFLGLAPVGNK---EKQKFIHALS 193 (551)
Q Consensus 160 r~Py~~~~~~~~TRFi~L~~~g~~---~K~kwlyAf~ 193 (551)
.. ...-|.||+-+.++.. ..+=|++-+.
T Consensus 261 ~~------~~g~t~vvNpGs~~~~~~~~n~p~v~dl~ 291 (296)
T 3rl5_A 261 TM------TDGYTTYINASTCTVSFQPTNPPIIFDLP 291 (296)
T ss_dssp EE------ECSSCEEEECBCSCTTSCCCSCCEEEEEE
T ss_pred eE------EECCEEEEECCcCCcCcCCCCCCEEEEec
Confidence 21 1235999999999753 2334554444
No 27
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=97.70 E-value=0.00028 Score=73.38 Aligned_cols=112 Identities=12% Similarity=0.097 Sum_probs=74.0
Q ss_pred CCCcccCCCCCCCcceEEE-----ECCEEEEEecCCCCCC------------C-----------eEEEEeccccCCCCCC
Q 008855 336 KECWFCLSSPSVESHLIVS-----VGEYYYCALPKGPLVE------------D-----------HVLVIPVEHVPNTIST 387 (551)
Q Consensus 336 ~~C~FC~~~~~~~~hlIvs-----~g~~~yl~l~kgPl~~------------G-----------H~LIIP~~H~~s~~~l 387 (551)
..|+||-.+...-..-|.. .+-.++++.+++|..+ | +++|.+-+|..++.+|
T Consensus 61 ~~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~l 140 (351)
T 1z84_A 61 SSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDI 140 (351)
T ss_dssp CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGS
T ss_pred CCCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHC
Confidence 3699998764431122222 3567899999999773 5 8899999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHh-cCC-ceEEEEe---cCCC-CCeeEEEEEecCcc------hHHHHHHHHHH
Q 008855 388 SPECEKELGRFQNSLMMYYKN-QGK-EAVFFEW---LSKR-GTHANLQAVPIPTS------KAAAVQDIFNL 447 (551)
Q Consensus 388 ~~e~~~Ei~~~~~~L~~~~~~-~g~-~~v~~E~---~~~~-~~H~HihvVPvp~~------~~~~~~~~F~~ 447 (551)
+.+++.++..+...-.+.+.+ .+. -+.+|++ .++. ..|.|.|++-.|.- ....+..||++
T Consensus 141 s~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~~~~p~~~~~e~~~~~~y~~~ 212 (351)
T 1z84_A 141 DPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEE 212 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEecCcCChHHHHHHHHHHHHHhh
Confidence 999988888765543333443 333 4566772 2232 47999999875542 22345556654
No 28
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=97.50 E-value=0.00035 Score=68.11 Aligned_cols=143 Identities=15% Similarity=0.078 Sum_probs=86.9
Q ss_pred CCceEEEecCCCCChHHH-H-HHhhcccccCCCccCCceeccCeEEecCCceeEECCeEEEEEccccCCCCCcCCCCCHH
Q 008855 10 IPIPTYFIGDYGVGAAKV-L-LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQD 87 (551)
Q Consensus 10 ~PipTyfigg~~~~~~~~-~-~~~~~~~~~~~~~~~g~~v~~Nl~yLg~~gv~~~~GLrIa~lsG~~~~~~~~~~~~~~~ 87 (551)
.++|+|++.|||+..... + +.+. ..+ +.+|+.+|.....+++.|++|.++++..... .++++
T Consensus 88 ~~~pv~~v~GNHD~~~~~~~~~~~~---------~~~--~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~ 151 (260)
T 2yvt_A 88 LGVKTFVVPGKNDAPLKIFLRAAYE---------AET--AYPNIRVLHEGFAGWRGEFEVIGFGGLLTEH-----EFEED 151 (260)
T ss_dssp TCSEEEEECCTTSCCHHHHHHHHHH---------TTT--TCTTEEECSSEEEEETTTEEEEEECSEEESS-----CCBSS
T ss_pred cCCcEEEEcCCCCchhhhhHHHHhh---------hcc--CCcceEEecCcceEEECCEEEEecCCCcCCC-----CcCHH
Confidence 478999999999986422 1 2222 112 3478888865333678899999998754211 11111
Q ss_pred HH---------HHHHHhhcCCCCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhcCCCcEEeccCCcee
Q 008855 88 DV---------DALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 158 (551)
Q Consensus 88 dv---------~~l~~~~~~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~lkPrYhFa~~~~~fy 158 (551)
++ ..|..+.......+|+|||..|.+... +. .+. .....|+..+.+++...+|+++++||.|...
T Consensus 152 ~~~~~~~~~~~~~l~~l~~~~~~~~Il~~H~pp~~~~~--d~--~~~--~~~~~~~~~l~~~~~~~~~~~vl~GH~H~~~ 225 (260)
T 2yvt_A 152 FVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFV--DR--TPE--DPKHHGSAVVNTIIKSLNPEVAIVGHVGKGH 225 (260)
T ss_dssp SSCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSST--TC--BTT--BSCCCSCHHHHHHHHHHCCSEEEECSSCCEE
T ss_pred HHhhcchhhHHHHHHHHHhcCCCCEEEEECCCcccccc--cc--Ccc--cccccCcHHHHHHHHHhCCCEEEECCccCCc
Confidence 11 223222223346789999999976411 10 000 1124688999999999999999999987222
Q ss_pred eccccccCCCCceeEEEeccCCCC
Q 008855 159 AREPYSNVDAVHVTRFLGLAPVGN 182 (551)
Q Consensus 159 Er~Py~~~~~~~~TRFi~L~~~g~ 182 (551)
.+ ..-|++++-+.++.
T Consensus 226 ~~--------~~~~~~in~Gs~~~ 241 (260)
T 2yvt_A 226 EL--------VGNTIVVNPGEFEE 241 (260)
T ss_dssp EE--------ETTEEEEECCBGGG
T ss_pred EE--------eCCEEEEeCCCCCC
Confidence 21 12377888877753
No 29
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=97.47 E-value=0.00048 Score=65.31 Aligned_cols=138 Identities=14% Similarity=0.088 Sum_probs=84.1
Q ss_pred cCCceEEEecCCCCChHHHHHHhhcccccCCCccCCceeccCeEEecCCceeEEC-CeEEEEEccccCCCCCcCCCCCHH
Q 008855 9 EIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLH-GLSVAYLSGRQSSEGQQFGTYSQD 87 (551)
Q Consensus 9 ~~PipTyfigg~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg~~gv~~~~-GLrIa~lsG~~~~~~~~~~~~~~~ 87 (551)
+.++|+|++.|||+.... +.+... .....+.+++++|.. ..+++. |++|.+++|...... .++++
T Consensus 61 ~~~~pv~~v~GNHD~~~~--~~~~~~-------~~~~~~~~~~~~l~~-~~~~~~~~~~i~g~~~~~~~~~----~~~~~ 126 (228)
T 1uf3_A 61 EAHLPTAYVPGPQDAPIW--EYLREA-------ANVELVHPEMRNVHE-TFTFWRGPYLVAGVGGEIADEG----EPEEH 126 (228)
T ss_dssp GGCSCEEEECCTTSCSHH--HHHHHH-------HHHHHHCTTEEECBT-SEEEETTTEEEEEECSEEESSS----CCBSS
T ss_pred hcCCcEEEECCCCCchhH--HHHHhh-------hhhhccCcceEEccc-ceEeeCCCcEEecCCCCcCCCC----ccChh
Confidence 357899999999998642 222100 001223467777764 455666 999999987532110 11222
Q ss_pred HH--------HHHH-HhhcCCCCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhcCCCcEEeccCCcee
Q 008855 88 DV--------DALR-ALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 158 (551)
Q Consensus 88 dv--------~~l~-~~~~~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~lkPrYhFa~~~~~fy 158 (551)
++ ..+. .+.......+|++||..|.+. .. ...|+..+.+++...+|+|+++||.|...
T Consensus 127 ~~~~~~~~~~~~~~~~l~~~~~~~~il~~H~p~~~~----~~---------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~ 193 (228)
T 1uf3_A 127 EALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHK----GL---------NEQGSHEVAHLIKTHNPLLVLVAGKGQKH 193 (228)
T ss_dssp SSCEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCBT----TT---------BTTSBHHHHHHHHHHCCSEEEECCSSCEE
T ss_pred hcccchhhhHHHHHHHHHhCCCCCeEEEEccCcccC----Cc---------cccCHHHHHHHHHHhCCCEEEEcccccCc
Confidence 21 1111 122222458999999999764 10 13578889999999999999999987322
Q ss_pred eccccccCCCCceeEEEeccCCC
Q 008855 159 AREPYSNVDAVHVTRFLGLAPVG 181 (551)
Q Consensus 159 Er~Py~~~~~~~~TRFi~L~~~g 181 (551)
.+ ..-|++++-+.++
T Consensus 194 ~~--------~~~~~~in~Gs~~ 208 (228)
T 1uf3_A 194 EM--------LGASWVVVPGDLS 208 (228)
T ss_dssp EE--------ETTEEEEECCBGG
T ss_pred cc--------cCCceEEEecccC
Confidence 21 1237888888775
No 30
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=96.80 E-value=0.00044 Score=55.71 Aligned_cols=58 Identities=29% Similarity=0.733 Sum_probs=23.7
Q ss_pred CcceeeeccCCCCCCCcccccCCchhhhh------hhcccchhhhhcCCcCCCCCccccCCCCC
Q 008855 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQ------CLRGVCLDFIIKGKCEKGPECSYKHSLQN 318 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~~c~~~~~~~~~~~------~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 318 (551)
.+|..|...|.|+.|+.|+|.|+...... +...+|..|.+.|.|..|.+|.+.|...+
T Consensus 13 ~~C~~f~~~G~C~~G~~C~f~H~~~e~~~~~~~~~~k~~~C~~f~~~G~C~~G~~C~f~H~~~e 76 (77)
T 1m9o_A 13 ELCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFKLQGRCPYGSRCHFIHNPTE 76 (77)
T ss_dssp CCCSGGGGTSCCTTTTTCSSCSSSCCGGGTC---------------------------------
T ss_pred hhCHHhhhCCCcCCCCCccCCCCChhhccccccccccCCcccchhhCcCCCCcCcCCCCCCCCC
Confidence 47988888999999999999999754322 33568999999999999999999987653
No 31
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=95.92 E-value=0.004 Score=49.38 Aligned_cols=54 Identities=35% Similarity=0.912 Sum_probs=43.0
Q ss_pred CcceeeeccCCCCCCC-cccccCCchh----hhhhhcccchhhhhcCCcCCCCCccccCCCC
Q 008855 261 KMCFKFIYSGSCPRGE-KCNFRHDTDA----REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 317 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~-~c~~~~~~~~----~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~ 317 (551)
.+|+.| ..|.|.+|+ .|+|.|++.. ..+....+|.+|+. |.|.+| +|++.|...
T Consensus 7 ~vC~~f-~~G~C~rg~~~C~f~H~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~~~ 65 (70)
T 3d2q_A 7 EVCREY-QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIK-GRCSRE-KCKYFHPPA 65 (70)
T ss_dssp EBCHHH-HTTCCSSCTTTCSSBCCCTTSCCBTTTTEEEBCHHHHT-TCCCCT-TCCSBCCCH
T ss_pred hhCHHH-hcCCCCCCCCCCCCccCcccccccccCCcceeccccCc-CCCCCC-CcCeeCCHH
Confidence 379888 679999999 5999998753 23444578999886 999999 999998754
No 32
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=95.88 E-value=0.0054 Score=51.95 Aligned_cols=49 Identities=27% Similarity=0.712 Sum_probs=43.3
Q ss_pred CcceeeeccCCCCCCCcccccCCchhhhhhhcccchhhhhcCCcCCCCCccccCCCCC
Q 008855 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 318 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~~c~~~~~~~~~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 318 (551)
.+|+.| ..|.|..|+.|+|.|+ ..+|+.|.+.|.|..|.+|.+.|....
T Consensus 14 ~lC~~f-~~G~C~~G~~C~f~H~--------~~~C~~f~~~G~C~~G~~C~f~H~~~~ 62 (98)
T 2cqe_A 14 ELCKFY-ITGFCARAENCPYMHG--------DFPCKLYHTTGNCINGDDCMFSHDPLT 62 (98)
T ss_dssp SBCTTT-TTTCCSCSTTCSSBSS--------SSBCSHHHHTSCCSSCTTCSSBCCCCC
T ss_pred ccCccc-ccCcCCCCCCCCCCCC--------CCcCcCcccCCcCCCCCCCcccCCCCc
Confidence 478878 4799999999999999 467999999999999999999998654
No 33
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.95 E-value=0.019 Score=46.28 Aligned_cols=53 Identities=26% Similarity=0.689 Sum_probs=43.8
Q ss_pred CcceeeeccCCCCCCCcccccCCchhhhhhhcccchhhhhcCCcCCCCCccccCCCCC
Q 008855 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 318 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~~c~~~~~~~~~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 318 (551)
.+|+.|.+ |.|.+|+.|+|.|+..... ..+|..|+..|.|. |.+|.+.|....
T Consensus 11 ~~C~~fl~-G~C~~G~~C~fsH~~~~~~---~~~C~~f~~~G~C~-~~~C~f~H~~~~ 63 (77)
T 2d9n_A 11 VVCKHWLR-GLCKKGDQCEFLHEYDMTK---MPECYFYSKFGECS-NKECPFLHIDPE 63 (77)
T ss_dssp SBCHHHHT-TCCSCTTSSSSBCSCCTTT---SCBCHHHHHTCCCC-CSSCSSBCCCTT
T ss_pred eeCHhHcc-CcCCCCCCCCCccccccCc---CCCCcccCCCCccC-CCCeeccCCCcc
Confidence 47988888 9999999999999976432 24799888889999 899999998753
No 34
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=94.93 E-value=0.09 Score=53.01 Aligned_cols=86 Identities=14% Similarity=0.100 Sum_probs=56.0
Q ss_pred CcceEEEECCE---EEEEec-C----CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCC---c-e
Q 008855 348 ESHLIVSVGEY---YYCALP-K----GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---E-A 413 (551)
Q Consensus 348 ~~hlIvs~g~~---~yl~l~-k----gPl~~GH~LIIP~~H-~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~---~-~ 413 (551)
+..-|+++++. -||++| . .|+..=|+|+||.+| +.|+.+|..+-..=+.++.....+++.. +|. . .
T Consensus 149 E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~r 228 (301)
T 3bl9_A 149 EADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLR 228 (301)
T ss_dssp SGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEE
T ss_pred ccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeE
Confidence 33446666655 266665 2 389999999999998 9999999887655555555555555443 232 2 2
Q ss_pred EEEEecCCCCCeeEEEEEecC
Q 008855 414 VFFEWLSKRGTHANLQAVPIP 434 (551)
Q Consensus 414 v~~E~~~~~~~H~HihvVPvp 434 (551)
++|-+.. ...|+|+|+|-+-
T Consensus 229 lgfHy~P-S~yHLHlHvis~~ 248 (301)
T 3bl9_A 229 VYLHYLP-SYYHLHVHFTALG 248 (301)
T ss_dssp EEEESSC-SSSSCEEEEEETT
T ss_pred EEecCCC-CcceEEEEEEecC
Confidence 3333222 3479999999874
No 35
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=94.88 E-value=0.015 Score=47.75 Aligned_cols=55 Identities=31% Similarity=0.780 Sum_probs=43.4
Q ss_pred CcceeeeccCCCCCCC-cccccCCchhh--hhhhcccchhhhhcCCcCCCCCccccCCCCC
Q 008855 261 KMCFKFIYSGSCPRGE-KCNFRHDTDAR--EQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 318 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~-~c~~~~~~~~~--~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 318 (551)
.+|++|.. |.|.+|+ .|+|.|.+... .+..-.+|.+|+ +|.|.++ .|++.|....
T Consensus 10 ~VCr~Flr-G~C~r~d~~C~f~H~~~~~~~~~~~~~vC~dfl-kG~C~r~-~C~y~H~~~~ 67 (83)
T 3d2n_A 10 EVCREFQR-GTCSRPDTECKFAHPSKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPPH 67 (83)
T ss_dssp EBCTTGGG-TCCCSCTTTCSSBCCCTTCCEETTEEECCHHHH-TTCCCCS-SCSSCCCCHH
T ss_pred hhcHHHhc-CCCCCCCCCCCCcCCCccccccCCceeehhHhh-hccccCC-CcceeCChHH
Confidence 37999998 9999997 99999998542 223346899985 5889998 8999987653
No 36
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=94.71 E-value=0.19 Score=48.48 Aligned_cols=127 Identities=11% Similarity=0.080 Sum_probs=75.8
Q ss_pred CCceEEEecCCCCChHHHHHHhhcccccCCCccCCcee--ccCeEEecC-CceeEECCeEEEEEccccCCCCCcCCCCCH
Q 008855 10 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKV--TDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQ 86 (551)
Q Consensus 10 ~PipTyfigg~~~~~~~~~~~~~~~~~~~~~~~~g~~v--~~Nl~yLg~-~gv~~~~GLrIa~lsG~~~~~~~~~~~~~~ 86 (551)
+.+|+|++.|||+....+...+.. .++ ..|. |. .-++...|++|.+|....... ....+++
T Consensus 70 l~~p~~~v~GNHD~~~~~~~~~~~-----------~~~~~~~~~---~~~~~~~~~~~~~~i~ld~~~~~~--~~~~~~~ 133 (274)
T 3d03_A 70 LNYPLYLIPGNHDDKALFLEYLQP-----------LCPQLGSDA---NNMRCAVDDFATRLLFIDSSRAGT--SKGWLTD 133 (274)
T ss_dssp CSSCEEEECCTTSCHHHHHHHHGG-----------GSGGGCSCG---GGCCEEECSSSSEEEECCCCCTTC--SSBCCCH
T ss_pred cCCCEEEECCCCCCHHHHHHHhhh-----------hhcCcccCC---CceEEEEEeCCEEEEEEeCCCCCC--CCCeeCH
Confidence 468999999999986544333320 010 0110 11 012235799999997654321 2245677
Q ss_pred HHHHHHHHh-hcCCCCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhc-CCCcEEeccCCceee
Q 008855 87 DDVDALRAL-AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYA 159 (551)
Q Consensus 87 ~dv~~l~~~-~~~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~l-kPrYhFa~~~~~fyE 159 (551)
++++-|... ........|+++|.-|......... . ....++..+.+++... .++++|+||.|..+.
T Consensus 134 ~~~~wl~~~l~~~~~~~~iv~~H~p~~~~~~~~~~-----~--~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (274)
T 3d03_A 134 ETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMD-----P--IACENGHRLLALVERFPSLTRIFCGHNHSLTM 201 (274)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEESSCSSCCSCTTTG-----G--GSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEECCCCcccCCcccC-----c--ccCcCHHHHHHHHHhCCCceEEEeCCCCCchh
Confidence 777766642 2223467899999988654211110 0 0124667788888887 789999999876543
No 37
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=94.41 E-value=0.12 Score=53.03 Aligned_cols=84 Identities=13% Similarity=0.080 Sum_probs=55.1
Q ss_pred ceEEEECCE---EEEEec-C----CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCC---c-eEE
Q 008855 350 HLIVSVGEY---YYCALP-K----GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---E-AVF 415 (551)
Q Consensus 350 hlIvs~g~~---~yl~l~-k----gPl~~GH~LIIP~~H-~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~---~-~v~ 415 (551)
.-||++++. -||++| . .|+..=|+|+||.+| +.|+.+|..+-..=+.++.....+++.. +|. . .++
T Consensus 198 e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lRlg 277 (350)
T 1vlr_A 198 DRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRVY 277 (350)
T ss_dssp CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEE
Confidence 346666655 266666 2 489999999999998 9999999887655555555555555443 232 2 233
Q ss_pred EEecCCCCCeeEEEEEecC
Q 008855 416 FEWLSKRGTHANLQAVPIP 434 (551)
Q Consensus 416 ~E~~~~~~~H~HihvVPvp 434 (551)
|=+.. ...|+|+|||-+-
T Consensus 278 fHy~P-S~yHLHlHvis~~ 295 (350)
T 1vlr_A 278 LHYLP-SYYHLHVHFTALG 295 (350)
T ss_dssp EESSC-SSSSCEEEEEETT
T ss_pred ecCCC-CcceEEEEEEecc
Confidence 33222 3479999999874
No 38
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=94.11 E-value=0.021 Score=47.43 Aligned_cols=54 Identities=31% Similarity=0.795 Sum_probs=43.4
Q ss_pred CcceeeeccCCCCCCC-cccccCCchh--hhhhhcccchhhhhcCCcCCCCCccccCCCC
Q 008855 261 KMCFKFIYSGSCPRGE-KCNFRHDTDA--REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 317 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~-~c~~~~~~~~--~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~ 317 (551)
++|++|.+ |.|.+|+ .|+|.|.+.. .++..-.+|.+|+ +|.|.++ .|++.|...
T Consensus 18 ~VCrdFlr-G~C~r~d~~CrfsH~~~~~~v~~~~~~vC~dfl-kG~C~r~-~Cky~H~~~ 74 (89)
T 2rpp_A 18 EVCRQFQR-GTCSRSDEECKFAHPPKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPT 74 (89)
T ss_dssp CBCHHHHH-TCCCCCTTTSSSBCCCSSSCCBTTBEEBCHHHH-HTCCCCT-TCCSBCCCH
T ss_pred hhchHHhc-CCCCCCCCCCCCcCCCccccccCCceeeehhhh-hCcCCCC-CcceecCHH
Confidence 48999998 9999998 9999999764 2333457899996 7899988 899888765
No 39
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=94.05 E-value=0.33 Score=48.28 Aligned_cols=124 Identities=10% Similarity=0.023 Sum_probs=78.5
Q ss_pred CCceEEEecCCCCChHHHHHHhhcccccCCCccCCceeccCeEEecC-CceeEECCeEEEEEccccCCCCCcCCCCCHHH
Q 008855 10 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDD 88 (551)
Q Consensus 10 ~PipTyfigg~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg~-~gv~~~~GLrIa~lsG~~~~~~~~~~~~~~~d 88 (551)
..+|+|++.|||+....+...+... ... .+. .-++...|++|..|.+.... ...+.+..++
T Consensus 99 ~~~pv~~v~GNHD~~~~~~~~~~~~---------~~~-------~~~~~~~~~~~~~~~i~lds~~~~--~~~~~~~~~q 160 (330)
T 3ib7_A 99 LGAELVWVMGNHDDRAELRKFLLDE---------APS-------MAPLDRVCMIDGLRIIVLDTSVPG--HHHGEIRASQ 160 (330)
T ss_dssp HTCEEEECCCTTSCHHHHHHHHHCC---------CCC-------CSCCCEEEEETTEEEEECCCCCTT--CCSBCCCHHH
T ss_pred cCCCEEEeCCCCCCHHHHHHHhccc---------ccc-------cCCcceEEEeCCEEEEEecCCCCC--CCCCccCHHH
Confidence 3679999999999865555544310 000 111 23456789999988876421 1234567888
Q ss_pred HHHHHHh-hcCCCCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhcCCCcEEeccCCcee
Q 008855 89 VDALRAL-AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 158 (551)
Q Consensus 89 v~~l~~~-~~~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~lkPrYhFa~~~~~fy 158 (551)
++-|... +.....-.|+++|--|......... . ....+...+.+++.....+++|+||.|..+
T Consensus 161 ~~wl~~~l~~~~~~~~iv~~Hh~p~~~~~~~~~-----~--~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~ 224 (330)
T 3ib7_A 161 LGWLAEELATPAPDGTILALHHPPIPSVLDMAV-----T--VELRDQAALGRVLRGTDVRAILAGHLHYST 224 (330)
T ss_dssp HHHHHHHTTSCCTTCEEEECSSCSSCCSSGGGG-----G--GSBSCHHHHHHHHTTSSEEEEEECSSSSCE
T ss_pred HHHHHHHHHhcccCCeEEEEECCCCCCCccccc-----c--ccccCHHHHHHHHhccCceEEEECCCCCcc
Confidence 8777763 2333344799999988765211110 0 112456778888888899999999987655
No 40
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.99 E-value=0.013 Score=49.71 Aligned_cols=54 Identities=37% Similarity=0.902 Sum_probs=43.9
Q ss_pred CcceeeeccCCCCCCC-cccccCCchhh----hhhhcccchhhhhcCCcCCCCCccccCCCC
Q 008855 261 KMCFKFIYSGSCPRGE-KCNFRHDTDAR----EQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 317 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~-~c~~~~~~~~~----~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~ 317 (551)
.+|+.|.. |.|.+|+ .|+|.|++... .+....+|.+|+. |.|.+| +|++.|...
T Consensus 21 ~VCr~Flr-G~C~rgd~~C~FsH~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~~~ 79 (98)
T 2e5s_A 21 EVCREFQR-GNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMRE-KCKYFHPPA 79 (98)
T ss_dssp EBCSHHHH-TCCSSHHHHCSSBCCSSCCSCCTTTCEEEBCHHHHH-TCCCCT-TCCSBCCCH
T ss_pred hhhHHHhc-CcCCCCCCCCCCcCCchhccccccCCccccchhhcc-CCCCCC-CcCccCChH
Confidence 48999988 9999999 79999998532 2344568998875 999999 999998765
No 41
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=93.62 E-value=0.026 Score=44.93 Aligned_cols=53 Identities=26% Similarity=0.684 Sum_probs=42.8
Q ss_pred CcceeeeccCCCCCCCcccccCCchhhhhhhcccchhhhhcCCcCCCCCccccCCCCC
Q 008855 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 318 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~~c~~~~~~~~~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 318 (551)
.+|+.|.+ |.|.+|+.|+|.|+.... ...+|..|+..|.|.. .+|.+.|...+
T Consensus 17 ~vCk~fl~-G~C~~G~~C~fsH~~~~~---~~~~C~~f~~~G~C~~-~~C~y~H~~p~ 69 (72)
T 2rhk_C 17 VVCKHWLR-GLCKKGDQCEFLHEYDMT---KMSECYFYSKFGECSN-KECPFLHIDPE 69 (72)
T ss_dssp SBCHHHHT-TCCCCGGGSSSBCSCCTT---SCCBCHHHHHHSCCSB-TTCCSBCCCCC
T ss_pred eeCHHHhc-CCCCCCCCCCCccccccc---cCCcccccCCCCCCCC-CCeeccCCCcc
Confidence 48988888 999999999999997543 2347988888788888 88999887643
No 42
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=90.08 E-value=1.8 Score=44.53 Aligned_cols=97 Identities=12% Similarity=0.023 Sum_probs=55.9
Q ss_pred CCCcccCCCCCCCcceEEEECCE-EEEEecCCCCC-C--------------------CeEEEEec-cccCCCCCCCHHHH
Q 008855 336 KECWFCLSSPSVESHLIVSVGEY-YYCALPKGPLV-E--------------------DHVLVIPV-EHVPNTISTSPECE 392 (551)
Q Consensus 336 ~~C~FC~~~~~~~~hlIvs~g~~-~yl~l~kgPl~-~--------------------GH~LIIP~-~H~~s~~~l~~e~~ 392 (551)
..|+||-.+...-. +..-+-. ++++-+++|.. + .|-+||=- .|..++.+++.+.+
T Consensus 50 ~~CpfCpg~~~~t~--~~~p~~~~~~v~~N~fpal~~~~~~~~~~~~~l~~~~~~~G~~~VIi~sp~H~~~l~~l~~~~~ 127 (348)
T 1gup_A 50 PDCFLCAGNVRVTG--DKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAAL 127 (348)
T ss_dssp TTCTTSTTCBCTTS--CBCCCCSSCEEEECTTCSCCTTCCCCCCCCCSSSCEEECCEEEEEEESCSCTTCCGGGSCHHHH
T ss_pred CCCCCCCCCcccCC--CCCCCCceEEEecCCCceeccCCCCccccCccceecCccceeEEEEEcCCcccCChhhCCHHHH
Confidence 36999987654210 0011112 55666666633 1 24555544 89999999998887
Q ss_pred HHHHHH-HHHHHHHHHhcCCceEEEEe---cCCC-CCeeEEEEEecCc
Q 008855 393 KELGRF-QNSLMMYYKNQGKEAVFFEW---LSKR-GTHANLQAVPIPT 435 (551)
Q Consensus 393 ~Ei~~~-~~~L~~~~~~~g~~~v~~E~---~~~~-~~H~HihvVPvp~ 435 (551)
..+..+ ++.+..+. ..-.-|.+||+ .++. ..|-|.|++-.|.
T Consensus 128 ~~vi~~~~~r~~~l~-~~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a~~~ 174 (348)
T 1gup_A 128 TEIVKTWQEQTAELG-KTYPWVQVFENKGAAMGCSNPHPGGQIWANSF 174 (348)
T ss_dssp HHHHHHHHHHHHHHH-HHCSEEEEEEEESGGGTCSCCSSEEEEEEESS
T ss_pred HHHHHHHHHHHHHHh-hcCCEEEEecccCCcCCcCCCCCceeEEeccc
Confidence 777655 33444444 32223556772 2233 4799999985543
No 43
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=65.15 E-value=37 Score=34.97 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=55.5
Q ss_pred ECCeEEEEEccccCCC------CCcCCCCCHHHHHHHHHhh---cCCCCccEEEeCCCchhccccccccccccCCCCCCC
Q 008855 62 LHGLSVAYLSGRQSSE------GQQFGTYSQDDVDALRALA---EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSN 132 (551)
Q Consensus 62 ~~GLrIa~lsG~~~~~------~~~~~~~~~~dv~~l~~~~---~~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~ 132 (551)
..|++|.+|....... ....+.+.+++++-|.... ...+..-|+++|.-|....... .+. ....
T Consensus 188 ~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~-----~~~--~~~~ 260 (443)
T 2xmo_A 188 SSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVI-----QKG--YTIN 260 (443)
T ss_dssp BSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC-------CC--SBCT
T ss_pred CCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCccccccc-----ccc--cccc
Confidence 4699999987653210 1122456777777776531 1123345999998776542111 001 0123
Q ss_pred CCHHHHHHHHhcCCCcEEeccCCceee
Q 008855 133 TDSTVSELVAEIKPRYHIAGSKGVFYA 159 (551)
Q Consensus 133 Gs~~i~~L~~~lkPrYhFa~~~~~fyE 159 (551)
++..+.+++....++.+|+||.|...-
T Consensus 261 ~~~~l~~ll~~~~v~lvl~GH~H~~~~ 287 (443)
T 2xmo_A 261 YNQQVIDALTEGAMDFSLSGHIHTQNI 287 (443)
T ss_dssp THHHHHHHHHHTTCCEEEECSSCSCEE
T ss_pred cHHHHHHHHHHcCCeEEEECCcccCch
Confidence 567788888888999999999876543
No 44
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=60.96 E-value=48 Score=35.30 Aligned_cols=53 Identities=13% Similarity=-0.046 Sum_probs=32.3
Q ss_pred EEEecCCCCChHH--HHHHhhcccccCCCccCCceeccCeEEec-------CCceeEECCeEEEEEccc
Q 008855 14 TYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGR 73 (551)
Q Consensus 14 Tyfigg~~~~~~~--~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg-------~~gv~~~~GLrIa~lsG~ 73 (551)
.+++.||||.... .+.+.-.. ..-.+++.|++.-. ..-|++.+|+|||.++-.
T Consensus 85 d~~~~GNHEfd~g~~~l~~~~~~-------~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~ 146 (516)
T 1hp1_A 85 DAMAIGNHEFDNPLTVLRQQEKW-------AKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLT 146 (516)
T ss_dssp CEEECCGGGGSSCHHHHHHHHHH-------CSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEE
T ss_pred CEEeeccccccCCHHHHHHHHhh-------CCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEec
Confidence 4788899997421 12222110 12347888987531 234667899999999754
No 45
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=59.34 E-value=19 Score=34.70 Aligned_cols=89 Identities=15% Similarity=0.119 Sum_probs=59.8
Q ss_pred CCCCeEEEEeccccCCCCCC------CHHHHHHHHHHHHHHHHHHHh-cCCceEEEE--ecCCCC-CeeEEEEEecCcch
Q 008855 368 LVEDHVLVIPVEHVPNTIST------SPECEKELGRFQNSLMMYYKN-QGKEAVFFE--WLSKRG-THANLQAVPIPTSK 437 (551)
Q Consensus 368 l~~GH~LIIP~~H~~s~~~l------~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E--~~~~~~-~H~HihvVPvp~~~ 437 (551)
.-+-|.|+||...+.-+.+- +++.|.+-+.....+.+.+.+ -.-..+... ...+++ .|+|||+--+-
T Consensus 47 ~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~~gRSQnQLHIHIsClr--- 123 (227)
T 2pof_A 47 NGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIR--- 123 (227)
T ss_dssp SSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCGGGCSCCSCCEEEEEBC---
T ss_pred CCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCCCCccccceeeehhhCC---
Confidence 34569999999999887752 456788888888878777764 222334444 233344 58888887753
Q ss_pred HHHHHHHHHHHHHHcCCceeecc
Q 008855 438 AAAVQDIFNLAAEKLGFKFLATK 460 (551)
Q Consensus 438 ~~~~~~~F~~~~~~~~~~~~~~~ 460 (551)
.++...+...+...+..|..++
T Consensus 124 -p~V~~~L~~~~~~i~~~W~~lp 145 (227)
T 2pof_A 124 -PDVREQLDNNLANISSRWLPLP 145 (227)
T ss_dssp -HHHHHHHHTTGGGCCSSCEECT
T ss_pred -HHHHHHHHHhccccCCCceECC
Confidence 4566667766677788897654
No 46
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=55.70 E-value=2.4 Score=33.31 Aligned_cols=24 Identities=42% Similarity=1.144 Sum_probs=0.0
Q ss_pred CcceeeeccCCCCCCCcccccCCc
Q 008855 261 KMCFKFIYSGSCPRGEKCNFRHDT 284 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~~c~~~~~~ 284 (551)
.+|..|...|.|+.|..|+|.|..
T Consensus 51 ~~C~~f~~~G~C~~G~~C~f~H~~ 74 (77)
T 1m9o_A 51 ELCHKFKLQGRCPYGSRCHFIHNP 74 (77)
T ss_dssp ------------------------
T ss_pred CcccchhhCcCCCCcCcCCCCCCC
Confidence 479999999999999999999985
No 47
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=54.19 E-value=3.2 Score=30.31 Aligned_cols=26 Identities=35% Similarity=0.713 Sum_probs=22.9
Q ss_pred CCCcceeeeccCCCCCCCcccccCCc
Q 008855 259 GDKMCFKFIYSGSCPRGEKCNFRHDT 284 (551)
Q Consensus 259 ~~~~c~~~~~~g~~~~g~~c~~~~~~ 284 (551)
...+|..|+.-|-||.|..|.+.||-
T Consensus 19 ~~~iC~~FSayGwCp~G~~Cp~SHDi 44 (50)
T 2fc6_A 19 PTSICDNFSAYGWCPLGPQCPQSHDI 44 (50)
T ss_dssp CSCBCSHHHHTCCCTTGGGCSSBCCC
T ss_pred ccchhhhccccccCCCCCCCCccccC
Confidence 34589999999999999999999985
No 48
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=50.90 E-value=18 Score=37.04 Aligned_cols=124 Identities=11% Similarity=0.067 Sum_probs=60.8
Q ss_pred ceEEEecCCCCChHH-HHHHhhcccccCCCccCCceeccCeEEecCCceeEE---CC--eEEEEEccccCCCCCcCCCCC
Q 008855 12 IPTYFIGDYGVGAAK-VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL---HG--LSVAYLSGRQSSEGQQFGTYS 85 (551)
Q Consensus 12 ipTyfigg~~~~~~~-~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg~~gv~~~---~G--LrIa~lsG~~~~~~~~~~~~~ 85 (551)
+|+|+|.|||....- ++..+. ..+.+|+.++.....+.+ .| +.|.+++....... ...+.
T Consensus 79 ~~v~~i~GNHD~~~~~~~~~~~------------~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~--~~~~~ 144 (379)
T 3tho_B 79 APVVVLPGNQDWKGLKLFGNFV------------TSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEA--LRKNE 144 (379)
T ss_dssp SCEEECCCTTSCTTHHHHHHHH------------HTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC------CHH
T ss_pred CCEEEEcCCCccccCccccccc------------cccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHH--hhhhc
Confidence 799999999996432 222221 234578887775444443 46 66666654322110 01121
Q ss_pred HHHHHHHHH-------hhcCCCCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhcCCCcEEeccCCcee
Q 008855 86 QDDVDALRA-------LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 158 (551)
Q Consensus 86 ~~dv~~l~~-------~~~~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~lkPrYhFa~~~~~fy 158 (551)
.+....+.. .......+.|+|+|--..|-...+... ..+. ..+...+..-...|++.||.|...
T Consensus 145 ~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se---~~~~------~~v~~~~~~~~~dyvalGH~H~~q 215 (379)
T 3tho_B 145 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIE---QGRE------IIINRALIPSVVDYAALGHIHSFR 215 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC----------CS------CCBCGGGSCTTSSEEEEESCSSCE
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCc---cccc------cccCHHHcCcCCCEEEcccccCCe
Confidence 222221211 111346789999998877653211110 0000 011111112357899999987764
No 49
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.19 E-value=4.7 Score=31.56 Aligned_cols=28 Identities=29% Similarity=0.930 Sum_probs=23.7
Q ss_pred CcceeeeccCCCCCCCcccccCCchhhhh
Q 008855 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQ 289 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~~c~~~~~~~~~~~ 289 (551)
.+|..| ..|+|+-|+.|.|.|-...-.+
T Consensus 21 ~LC~~~-~~G~C~~G~~C~FAHG~~ELr~ 48 (69)
T 2d9m_A 21 SICDRY-MNGTCPEGNSCKFAHGNAELHE 48 (69)
T ss_dssp SBCHHH-HHSCCSSCSSCSSBSSHHHHHH
T ss_pred ccCccc-CcCCCCCCCccCCcCCHHHHhh
Confidence 489999 7899999999999999765433
No 50
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=47.41 E-value=5.8 Score=33.12 Aligned_cols=25 Identities=32% Similarity=0.697 Sum_probs=22.6
Q ss_pred CcceeeeccCCCCCCCcccccCCch
Q 008855 261 KMCFKFIYSGSCPRGEKCNFRHDTD 285 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~~c~~~~~~~ 285 (551)
.+|..|.+.|.|+.|..|+|.|++.
T Consensus 37 ~~C~~f~~~G~C~~G~~C~f~H~~~ 61 (98)
T 2cqe_A 37 FPCKLYHTTGNCINGDDCMFSHDPL 61 (98)
T ss_dssp SBCSHHHHTSCCSSCTTCSSBCCCC
T ss_pred CcCcCcccCCcCCCCCCCcccCCCC
Confidence 4799998999999999999999964
No 51
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=44.56 E-value=19 Score=34.67 Aligned_cols=149 Identities=7% Similarity=-0.066 Sum_probs=73.8
Q ss_pred CceEEEecCCCCChHHHHHHhhcccccCCCccCCceeccCeEEecCCceeE-ECCeEEEEEccccCCCC-----------
Q 008855 11 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVAYLSGRQSSEG----------- 78 (551)
Q Consensus 11 PipTyfigg~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg~~gv~~-~~GLrIa~lsG~~~~~~----------- 78 (551)
.+|+|++.|||+........+.-. .....+..++.+|.-..++-. -.+++|..|........
T Consensus 82 ~~p~~~v~GNHD~~~~~~~~~~~~------~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~ 155 (313)
T 1ute_A 82 NVPWHVLAGNHDHLGNVSAQIAYS------KISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPER 155 (313)
T ss_dssp TCCEEECCCHHHHHSCHHHHHHGG------GTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCS
T ss_pred CCCEEEECCCCccCCCcccccccc------ccCCCccCcccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccCC
Confidence 789999999998643322222100 011234444443321110000 03788888876431000
Q ss_pred CcCCCCCHHHHHHHHH-hhcCCCCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhcCCCcEEeccCCce
Q 008855 79 QQFGTYSQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 157 (551)
Q Consensus 79 ~~~~~~~~~dv~~l~~-~~~~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~lkPrYhFa~~~~~f 157 (551)
.......+++++-|.. ++......-|+++|.-|......+.. ..-...+.+|+...+..+.|+||.|.+
T Consensus 156 ~~~~~~~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~~~----------~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 156 PRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPT----------HCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSSSCCC----------HHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred ccccchHHHHHHHHHHHHHhCCCCeEEEEECCCCccCCCCCCc----------HHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 0011223445555554 33333467799999877554321110 000134556677778999999998753
Q ss_pred eeccccccCCCCceeEEEeccCCC
Q 008855 158 YAREPYSNVDAVHVTRFLGLAPVG 181 (551)
Q Consensus 158 yEr~Py~~~~~~~~TRFi~L~~~g 181 (551)
.-..+ ..-+.+|..+..+
T Consensus 226 ~~~~~------~~g~~~i~~gs~~ 243 (313)
T 1ute_A 226 QYLQD------ENGLGFVLSGAGN 243 (313)
T ss_dssp EEEEC------TTCCEEEEECBSS
T ss_pred hhccC------CCCceEEEECCCc
Confidence 22111 1125677666554
No 52
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=42.40 E-value=9.1 Score=38.33 Aligned_cols=127 Identities=10% Similarity=0.053 Sum_probs=55.5
Q ss_pred ceEEEecCCCCChHHHHHHhhcccccCCCccCCceeccCeEEecCCcee---EE--CCeEEEEEccccCCCCC-c-CCCC
Q 008855 12 IPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF---TL--HGLSVAYLSGRQSSEGQ-Q-FGTY 84 (551)
Q Consensus 12 ipTyfigg~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg~~gv~---~~--~GLrIa~lsG~~~~~~~-~-~~~~ 84 (551)
+|+|++.|||.... +..... .-....+|+++++..... .+ .++.|.+++-....... . ...|
T Consensus 97 ~pv~~i~GNHD~~~--~~~~~~---------~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~ 165 (336)
T 2q8u_A 97 APVVVLPGNHDWKG--LKLFGN---------FVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDF 165 (336)
T ss_dssp SCEEECCC--------CHHHHH---------HHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSSHH
T ss_pred CCEEEECCCCCccc--cccHHH---------HHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHH
Confidence 79999999999753 222110 000111679998876542 22 45777777532110000 0 0011
Q ss_pred CHHHHHHHH-Hhhc---CCCCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhcCCCcEEeccCCceee
Q 008855 85 SQDDVDALR-ALAE---EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA 159 (551)
Q Consensus 85 ~~~dv~~l~-~~~~---~~~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~lkPrYhFa~~~~~fyE 159 (551)
++.+..+. .+.. ......|+|+|.-+.+........ .+ ....+...+......|.++||.|....
T Consensus 166 -~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~----~~-----~~~~v~~~l~~~~~d~v~~GH~H~~~~ 234 (336)
T 2q8u_A 166 -RFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIE----QG-----REIIINRALIPSVVDYAALGHIHSFRE 234 (336)
T ss_dssp -HHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------------CCCEECGGGSCTTSSEEEEESCSSCEE
T ss_pred -HHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCcc----ch-----hhcccCHHHccccCCEEEEccccCceE
Confidence 12222222 2221 345688999999887653210000 00 000111112223568999999876544
No 53
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=36.30 E-value=14 Score=27.01 Aligned_cols=27 Identities=30% Similarity=0.749 Sum_probs=24.5
Q ss_pred hcccchhhhhcCCcCCCCCccccCCCC
Q 008855 291 LRGVCLDFIIKGKCEKGPECSYKHSLQ 317 (551)
Q Consensus 291 ~~~~c~~f~~~g~~~~Gr~~~~~h~~~ 317 (551)
...+|.+|-+.|=|..|.+|.+.|.++
T Consensus 19 ~~~iC~~FSayGwCp~G~~Cp~SHDiD 45 (50)
T 2fc6_A 19 PTSICDNFSAYGWCPLGPQCPQSHDIS 45 (50)
T ss_dssp CSCBCSHHHHTCCCTTGGGCSSBCCCC
T ss_pred ccchhhhccccccCCCCCCCCccccCC
Confidence 457899999999999999999999876
No 54
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=35.92 E-value=36 Score=36.33 Aligned_cols=53 Identities=13% Similarity=0.009 Sum_probs=33.2
Q ss_pred eEEEecCCCCCh---HHHHHHhhcccccCCCccCCceeccCeEEec--------CCceeEECCeEEEEEccc
Q 008855 13 PTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWLK--------GSGNFTLHGLSVAYLSGR 73 (551)
Q Consensus 13 pTyfigg~~~~~---~~~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg--------~~gv~~~~GLrIa~lsG~ 73 (551)
+.+++.||||.. ..+.+.+.. ..-.+|+.|+++-. ..-|++.+|+|||.++-.
T Consensus 86 ~D~~tlGNHEfd~G~~~l~~~l~~--------~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t 149 (509)
T 3ive_A 86 FDAVTIGNHEFDHGWDNTLLQLSQ--------AKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLH 149 (509)
T ss_dssp CSEECCCGGGGTTCHHHHHHHHTT--------CSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEE
T ss_pred CcEEeecccccccCHHHHHHHHhh--------CCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecc
Confidence 346778999953 233333321 12348899998732 223557899999998763
No 55
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=35.42 E-value=18 Score=29.64 Aligned_cols=26 Identities=31% Similarity=0.775 Sum_probs=22.6
Q ss_pred cccchhhhhcCCcCCCC-CccccCCCCC
Q 008855 292 RGVCLDFIIKGKCEKGP-ECSYKHSLQN 318 (551)
Q Consensus 292 ~~~c~~f~~~g~~~~Gr-~~~~~h~~~~ 318 (551)
..||.+|+. |.|.+|. +|++.|....
T Consensus 17 ~~VCrdFlr-G~C~r~d~~CrfsH~~~~ 43 (89)
T 2rpp_A 17 LEVCRQFQR-GTCSRSDEECKFAHPPKS 43 (89)
T ss_dssp ECBCHHHHH-TCCCCCTTTSSSBCCCSS
T ss_pred hhhchHHhc-CCCCCCCCCCCCcCCCcc
Confidence 368999998 9999998 8999998764
No 56
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=35.30 E-value=81 Score=30.05 Aligned_cols=83 Identities=12% Similarity=-0.007 Sum_probs=45.3
Q ss_pred CCCHHHHHHHHHh-hcCC--CCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhc-CCCcEEeccCCcee
Q 008855 83 TYSQDDVDALRAL-AEEP--GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFY 158 (551)
Q Consensus 83 ~~~~~dv~~l~~~-~~~~--~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~l-kPrYhFa~~~~~fy 158 (551)
...+++++-|... +... ..--|+++|--|..... . +. ....+...+.+++..- ..+++|+||.|...
T Consensus 200 ~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~--~----~~---~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~ 270 (322)
T 2nxf_A 200 GFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAA--D----PI---CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGG 270 (322)
T ss_dssp BCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSS--C----GG---GSCTTHHHHHHHHHTCTTEEEEEECSCTTCE
T ss_pred ccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCCCC--C----cc---ccccCHHHHHHHHhcCCCeEEEEcCCcCCCC
Confidence 3456666666642 2111 22348999976654421 0 00 1123556677777766 56789999987654
Q ss_pred eccccccCCCCceeEEEeccCC
Q 008855 159 AREPYSNVDAVHVTRFLGLAPV 180 (551)
Q Consensus 159 Er~Py~~~~~~~~TRFi~L~~~ 180 (551)
-... ..-++++..+..
T Consensus 271 ~~~~------~~g~~~i~~~~~ 286 (322)
T 2nxf_A 271 RCTD------SSGAQHITLEGV 286 (322)
T ss_dssp EEEC------TTSCEEEECCCG
T ss_pred ceec------cCCceEEEecch
Confidence 3321 112566666554
No 57
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=32.47 E-value=22 Score=28.62 Aligned_cols=26 Identities=31% Similarity=0.775 Sum_probs=22.2
Q ss_pred cccchhhhhcCCcCCCC-CccccCCCCC
Q 008855 292 RGVCLDFIIKGKCEKGP-ECSYKHSLQN 318 (551)
Q Consensus 292 ~~~c~~f~~~g~~~~Gr-~~~~~h~~~~ 318 (551)
..||.+|+. |.|.+|. +|++.|....
T Consensus 9 ~~VCr~Flr-G~C~r~d~~C~f~H~~~~ 35 (83)
T 3d2n_A 9 LEVCREFQR-GTCSRPDTECKFAHPSKS 35 (83)
T ss_dssp EEBCTTGGG-TCCCSCTTTCSSBCCCTT
T ss_pred chhcHHHhc-CCCCCCCCCCCCcCCCcc
Confidence 368999998 9999995 8999998764
No 58
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=29.00 E-value=22 Score=27.44 Aligned_cols=25 Identities=28% Similarity=0.996 Sum_probs=21.1
Q ss_pred ccchhhhhcCCcCCCC-CccccCCCCC
Q 008855 293 GVCLDFIIKGKCEKGP-ECSYKHSLQN 318 (551)
Q Consensus 293 ~~c~~f~~~g~~~~Gr-~~~~~h~~~~ 318 (551)
.||.+| .+|.|.+|. .|++.|....
T Consensus 7 ~vC~~f-~~G~C~rg~~~C~f~H~~~~ 32 (70)
T 3d2q_A 7 EVCREY-QRGNCNRGENDCRFAHPADS 32 (70)
T ss_dssp EBCHHH-HTTCCSSCTTTCSSBCCCTT
T ss_pred hhCHHH-hcCCCCCCCCCCCCccCccc
Confidence 589999 679999999 5999997653
No 59
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.38 E-value=15 Score=30.60 Aligned_cols=33 Identities=24% Similarity=0.643 Sum_probs=25.6
Q ss_pred CcceeeeccCCCCCCCcccccCCchhhhhhhcccc
Q 008855 261 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVC 295 (551)
Q Consensus 261 ~~c~~~~~~g~~~~g~~c~~~~~~~~~~~~~~~~c 295 (551)
.+|..|.. |.|.++ .|+|.|.+...+...+.+|
T Consensus 57 ~vC~~flk-G~C~r~-~C~y~H~~~~l~~~~~~~~ 89 (98)
T 2e5s_A 57 TVCMDYIK-GRCMRE-KCKYFHPPAHLQAKIKAAQ 89 (98)
T ss_dssp EBCHHHHH-TCCCCT-TCCSBCCCHHHHHHHHHHH
T ss_pred ccchhhcc-CCCCCC-CcCccCChHHHHHHHHHHH
Confidence 47888766 999999 9999999977666555443
No 60
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=27.24 E-value=1.1e+02 Score=26.92 Aligned_cols=60 Identities=13% Similarity=0.049 Sum_probs=42.7
Q ss_pred CCccEEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhcCCCcEEeccCCceeeccccccCCCCceeEEEeccC
Q 008855 100 GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAP 179 (551)
Q Consensus 100 ~~vDIllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~lkPrYhFa~~~~~fyEr~Py~~~~~~~~TRFi~L~~ 179 (551)
.+..|+++|-.|.++. .+...+.+++....+++.++||.|..+... . .-+++|+-+.
T Consensus 76 ~~~~i~~~Hg~~~~~~----------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~---~----~~~~~inpGs 132 (176)
T 3ck2_A 76 GSTKIIQTHGHLFDIN----------------FNFQKLDYWAQEEEAAICLYGHLHVPSAWL---E----GKILFLNPGS 132 (176)
T ss_dssp TTEEEEEECSGGGTTT----------------TCSHHHHHHHHHTTCSEEECCSSCCEEEEE---E----TTEEEEEECC
T ss_pred CCeEEEEECCCccCCC----------------CCHHHHHHHHHhcCCCEEEECCcCCCCcEE---E----CCEEEEECCC
Confidence 4678999998875431 245677888888999999999987655421 1 1278888877
Q ss_pred CCC
Q 008855 180 VGN 182 (551)
Q Consensus 180 ~g~ 182 (551)
++.
T Consensus 133 ~~~ 135 (176)
T 3ck2_A 133 ISQ 135 (176)
T ss_dssp SSS
T ss_pred CCc
Confidence 763
No 61
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=26.86 E-value=50 Score=35.32 Aligned_cols=52 Identities=6% Similarity=-0.208 Sum_probs=33.7
Q ss_pred EEecCCCCChHH---HHHHhhcccccCCCccCCceeccCeEEecC-----------CceeEECCeEEEEEccc
Q 008855 15 YFIGDYGVGAAK---VLLAASKNSANQGFKMDGFKVTDNLFWLKG-----------SGNFTLHGLSVAYLSGR 73 (551)
Q Consensus 15 yfigg~~~~~~~---~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg~-----------~gv~~~~GLrIa~lsG~ 73 (551)
+.+.||||.... +++.+.+. ..-.+||.||+.-+. +-|++.+|+|||.++-.
T Consensus 87 a~~lGNHEFd~G~~~l~~~~~~~-------a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGlt 152 (530)
T 4h1s_A 87 AMALGNHEFDNGVEGLIEPLLKE-------AKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 152 (530)
T ss_dssp EEECCGGGGTTTTHHHHTTTTTT-------CSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEE
T ss_pred EEEEchhhhccCHHHHHHHHHhh-------CCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecccc
Confidence 567889997432 22322211 234699999987542 23557899999999864
No 62
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=25.20 E-value=50 Score=35.59 Aligned_cols=55 Identities=4% Similarity=-0.265 Sum_probs=33.8
Q ss_pred EEEecCCCCChHHHHHHhh-cccccCCCccCCceeccCeEEec-----------CCceeEECCeEEEEEccc
Q 008855 14 TYFIGDYGVGAAKVLLAAS-KNSANQGFKMDGFKVTDNLFWLK-----------GSGNFTLHGLSVAYLSGR 73 (551)
Q Consensus 14 Tyfigg~~~~~~~~~~~~~-~~~~~~~~~~~g~~v~~Nl~yLg-----------~~gv~~~~GLrIa~lsG~ 73 (551)
.+++.||||.... .+.+. ..-. ...-.+|+.|++..+ ..-|++.+|+|||.++-.
T Consensus 108 d~~~~GNHEfd~g-~~~l~~~~~~----~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~ 174 (546)
T 4h2g_A 108 DAMALGNHEFDNG-VEGLIEPLLK----EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 174 (546)
T ss_dssp SEEECCGGGGTTH-HHHHHTTTTT----TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEE
T ss_pred cEEeccCcccccC-HHHHHHHHHh----hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEec
Confidence 3778899996432 22221 1000 112358999999765 234557899999988754
No 63
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=24.27 E-value=83 Score=31.74 Aligned_cols=53 Identities=11% Similarity=-0.212 Sum_probs=32.1
Q ss_pred EEEecCCCCChH--HHHHHhhcccccCCCccCCceeccCeEEe--c-----CCceeEE-----C----CeEEEEEccc
Q 008855 14 TYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWL--K-----GSGNFTL-----H----GLSVAYLSGR 73 (551)
Q Consensus 14 Tyfigg~~~~~~--~~~~~~~~~~~~~~~~~~g~~v~~Nl~yL--g-----~~gv~~~-----~----GLrIa~lsG~ 73 (551)
-+++.||||... ..+.++-.. ..-..||.|++.- | ...|++. + |+|||+++-.
T Consensus 95 D~~t~GNHEfd~G~~~l~~~~~~-------a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~~gvkIgviG~~ 165 (339)
T 3jyf_A 95 AVGNLGNHEFNYGLDFLHKALAG-------AKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYIGFV 165 (339)
T ss_dssp SEEECCGGGGTTCHHHHHHHHHT-------CSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred CEEecchhhhhccHHHHHHHHHh-------cCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCcCCeEEEEEecc
Confidence 467779999642 223333211 1345999999872 2 2344554 4 6999999864
No 64
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=21.97 E-value=89 Score=32.81 Aligned_cols=22 Identities=27% Similarity=0.462 Sum_probs=15.2
Q ss_pred ccCCcccCCceEEEecCCCCCh
Q 008855 3 YVEGRSEIPIPTYFIGDYGVGA 24 (551)
Q Consensus 3 y~~G~~~~PipTyfigg~~~~~ 24 (551)
|-.....+.+|+|+|.|||..+
T Consensus 131 y~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 131 YQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp -----CCBCSCEEECCCSSSCC
T ss_pred cccccccCCCcEEEEccCCCCc
Confidence 3334457889999999999976
No 65
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=20.05 E-value=93 Score=33.20 Aligned_cols=130 Identities=8% Similarity=-0.036 Sum_probs=64.8
Q ss_pred EEEecCCCCChH---HHHHHhhcccccCCCccCCceeccCeEEecC------CceeEECCeEEEEEccccCCCCC-c---
Q 008855 14 TYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWLKG------SGNFTLHGLSVAYLSGRQSSEGQ-Q--- 80 (551)
Q Consensus 14 Tyfigg~~~~~~---~~~~~~~~~~~~~~~~~~g~~v~~Nl~yLg~------~gv~~~~GLrIa~lsG~~~~~~~-~--- 80 (551)
.+++.|||+... .+.+.+.. ..-.+|+.|++..|. .-|++.+|+|||.++-....... .
T Consensus 103 D~~t~GNHefd~G~~~l~~~~~~--------~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~~~ 174 (527)
T 3qfk_A 103 DFGTLGNHEFNYGLPYLKDTLRR--------LNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPE 174 (527)
T ss_dssp CEECCCGGGGTTCHHHHHHHHHH--------CSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSCHH
T ss_pred cEEeccccccccCHHHHHHHHHh--------CCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccCcc
Confidence 467789999532 22222221 123588999986432 34556899999999864321000 0
Q ss_pred ---CCCCCHHHHHHHHHhh-cCCCCcc--EEEeCCCchhccccccccccccCCCCCCCCCHHHHHHHHhc--CCCcEEec
Q 008855 81 ---FGTYSQDDVDALRALA-EEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI--KPRYHIAG 152 (551)
Q Consensus 81 ---~~~~~~~dv~~l~~~~-~~~~~vD--IllT~~WP~~I~~~~~~~~~~~~~~~~~~Gs~~i~~L~~~l--kPrYhFa~ 152 (551)
-..|.. .++.+.... ....++| |+|+| |+..-...... +. ....|.....+|+..+ ...--++|
T Consensus 175 ~~~g~~~~d-~~~~~~~~v~~l~~~~D~iIvl~H-~G~~~d~~~~~---~~---~~~~~e~~~~~la~~~~~giDlIlgG 246 (527)
T 3qfk_A 175 HIQSLTFHS-AFEILQQYLPEMKRHADIIVVCYH-GGFEKDLESGT---PT---EVLTGENEGYAMLEAFSKDIDIFITG 246 (527)
T ss_dssp HHTTEEECC-HHHHHHHHHHHHHHHCSEEEEEEE-CCCSBCTTTCC---BS---SCCSSSCCHHHHHHHHGGGCSEEECC
T ss_pred ccCCcEEcC-HHHHHHHHHHHHHhCCCEEEEEeC-cCcccccccCc---cc---cccccchHHHHHHHhcCCCCcEEEEC
Confidence 001221 122222110 0012355 67788 54332110000 00 0112444456777776 56678899
Q ss_pred cCCceee
Q 008855 153 SKGVFYA 159 (551)
Q Consensus 153 ~~~~fyE 159 (551)
|.|..+.
T Consensus 247 HtH~~~~ 253 (527)
T 3qfk_A 247 HQHRQIA 253 (527)
T ss_dssp SSCCEEE
T ss_pred CCCcccc
Confidence 9888775
Done!