Query 008858
Match_columns 551
No_of_seqs 150 out of 215
Neff 4.5
Searched_HMMs 46136
Date Thu Mar 28 17:28:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008858.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008858hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2769 Putative u4/u6 small n 100.0 3E-130 6E-135 1028.4 33.4 425 61-550 94-522 (522)
2 PF08572 PRP3: pre-mRNA proces 100.0 4.1E-73 9E-78 557.6 20.1 221 165-396 1-223 (223)
3 PF06544 DUF1115: Protein of u 100.0 2.2E-42 4.7E-47 313.1 10.9 128 418-545 1-128 (128)
4 PF04940 BLUF: Sensors of blue 96.0 0.0091 2E-07 52.1 4.3 66 436-520 27-92 (93)
5 PRK14432 acylphosphatase; Prov 70.9 4.3 9.3E-05 35.7 3.1 45 431-475 17-63 (93)
6 PRK14436 acylphosphatase; Prov 69.9 4.5 9.7E-05 35.4 3.0 45 431-475 19-64 (91)
7 PRK14421 acylphosphatase; Prov 69.6 4.4 9.6E-05 36.1 3.0 44 431-474 19-63 (99)
8 PRK14452 acylphosphatase; Prov 68.6 4.9 0.00011 36.4 3.1 48 429-476 33-81 (107)
9 PRK14420 acylphosphatase; Prov 68.2 5.1 0.00011 34.7 3.0 46 431-476 17-63 (91)
10 PRK14441 acylphosphatase; Prov 67.8 5.5 0.00012 34.9 3.1 44 431-474 20-64 (93)
11 PRK14424 acylphosphatase; Prov 66.8 5.4 0.00012 35.2 2.9 45 430-474 21-66 (94)
12 PRK14430 acylphosphatase; Prov 66.4 5.8 0.00012 34.8 3.0 43 431-473 19-62 (92)
13 PRK14427 acylphosphatase; Prov 66.3 5.7 0.00012 34.9 2.9 46 430-475 20-66 (94)
14 PRK14445 acylphosphatase; Prov 65.7 6.5 0.00014 34.2 3.2 44 431-474 19-63 (91)
15 PRK14449 acylphosphatase; Prov 65.2 6.1 0.00013 34.3 2.9 45 431-475 18-63 (90)
16 PRK14442 acylphosphatase; Prov 65.1 6.8 0.00015 34.2 3.2 44 431-474 19-63 (91)
17 COG1254 AcyP Acylphosphatases 64.9 7.1 0.00015 34.5 3.3 48 427-474 15-63 (92)
18 PF00708 Acylphosphatase: Acyl 64.6 5.9 0.00013 34.0 2.7 50 429-478 17-67 (91)
19 PRK14429 acylphosphatase; Prov 64.0 6.6 0.00014 34.1 2.9 46 431-476 17-63 (90)
20 PRK14440 acylphosphatase; Prov 64.0 6.9 0.00015 34.1 3.0 44 431-474 18-62 (90)
21 PRK14435 acylphosphatase; Prov 64.0 6.6 0.00014 34.2 2.9 44 431-474 17-61 (90)
22 PRK14448 acylphosphatase; Prov 62.9 7.1 0.00015 34.0 2.9 44 431-474 17-61 (90)
23 PRK14437 acylphosphatase; Prov 62.8 7 0.00015 35.5 2.9 46 428-473 35-81 (109)
24 PRK14426 acylphosphatase; Prov 62.8 7.2 0.00016 34.1 2.9 45 430-474 18-63 (92)
25 PRK10363 cpxP periplasmic repr 62.7 41 0.00088 33.0 8.2 77 308-400 45-130 (166)
26 PRK10455 periplasmic protein; 61.9 41 0.00089 32.5 8.1 75 310-400 53-136 (161)
27 PRK14433 acylphosphatase; Prov 61.7 8.2 0.00018 33.5 3.0 44 431-474 16-60 (87)
28 PRK14438 acylphosphatase; Prov 61.1 8.3 0.00018 33.6 3.0 43 431-473 18-61 (91)
29 PRK14423 acylphosphatase; Prov 60.6 8.5 0.00019 33.6 3.0 46 431-476 20-66 (92)
30 PRK14450 acylphosphatase; Prov 59.6 9 0.00019 33.3 2.9 43 431-473 17-61 (91)
31 PRK14422 acylphosphatase; Prov 59.3 9.6 0.00021 33.4 3.1 46 430-475 20-66 (93)
32 PRK14451 acylphosphatase; Prov 58.6 9.5 0.00021 33.2 2.9 45 431-475 18-63 (89)
33 PRK14425 acylphosphatase; Prov 58.2 9.8 0.00021 33.4 3.0 44 431-474 21-65 (94)
34 PRK14443 acylphosphatase; Prov 57.7 11 0.00024 33.3 3.2 45 431-475 19-64 (93)
35 PRK14446 acylphosphatase; Prov 56.9 12 0.00025 32.7 3.2 43 432-474 18-61 (88)
36 PRK14444 acylphosphatase; Prov 56.6 11 0.00024 33.0 3.0 45 431-475 19-64 (92)
37 PRK12751 cpxP periplasmic stre 56.4 60 0.0013 31.6 8.2 80 309-400 52-136 (162)
38 PF13801 Metal_resist: Heavy-m 53.1 91 0.002 26.5 8.1 79 311-400 39-124 (125)
39 PRK14434 acylphosphatase; Prov 50.9 15 0.00033 32.2 2.9 45 431-475 17-64 (92)
40 PF08690 GET2: GET complex sub 50.9 12 0.00027 39.5 2.8 26 314-339 2-32 (302)
41 PRK14428 acylphosphatase; Prov 50.8 15 0.00033 32.6 3.0 45 430-474 22-67 (97)
42 PRK14439 acylphosphatase; Prov 50.0 16 0.00034 35.8 3.1 45 431-475 90-135 (163)
43 PRK14431 acylphosphatase; Prov 49.5 21 0.00045 31.1 3.6 44 432-475 18-61 (89)
44 PRK14447 acylphosphatase; Prov 49.3 17 0.00038 31.9 3.1 44 431-474 19-64 (95)
45 KOG3360 Acylphosphatase [Energ 41.0 51 0.0011 29.8 4.7 68 437-519 29-97 (98)
46 PHA00431 internal virion prote 30.3 39 0.00084 39.3 2.7 75 350-440 38-115 (746)
47 COG5154 BRX1 RNA-binding prote 26.4 58 0.0013 33.4 2.9 40 359-398 231-270 (283)
48 PF12396 DUF3659: Protein of u 25.2 44 0.00096 27.8 1.6 20 113-132 37-56 (64)
49 PRK05320 rhodanese superfamily 20.5 1.1E+02 0.0024 31.5 3.7 59 416-475 4-64 (257)
No 1
>KOG2769 consensus Putative u4/u6 small nuclear ribonucleoprotein [RNA processing and modification]
Probab=100.00 E-value=2.9e-130 Score=1028.40 Aligned_cols=425 Identities=50% Similarity=0.746 Sum_probs=376.7
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCCcccccccCCCCCCCCCCC--CCCCCCCCceEecCCC--CeeccCCCeeeccCCCc
Q 008858 61 NITNIEAVKRAQELAAKMGFRQDPEFAPIINCFPGQPPVDAAV--PQKPTKAPVLRVDALG--REIDEHGNVVNRTKPSN 136 (551)
Q Consensus 61 ~~~~~~~~~~a~~~a~~~~~~q~~~~~~~~~~~p~~~~~~~~~--~~~~~k~~~L~lD~~G--R~iD~~G~vI~~~kp~~ 136 (551)
+....++++|++.|+.. ++++..+.++.+ +..|+++..|+.|+.| |.||+.|++|. ++|+.
T Consensus 94 s~~~~~~~~r~~~L~~~--------------~~~~~~t~~~~~~~a~~~tkg~~l~~~~le~~r~i~e~~~~i~-t~~~~ 158 (522)
T KOG2769|consen 94 SKQILEAVKRPQELAQN--------------IQNSIRTPDMPISKAIKQTKGAVLRQDALEKKRKIDELGNVID-TKPSN 158 (522)
T ss_pred hHHHHHHHhhhhhhccc--------------cccccCCcccchhhhhcccccceeehhhhhhhhhHhhhcchhh-ccccc
Confidence 56677888888888776 334444445556 7889999999999999 99999999999 78888
Q ss_pred ccchhhhhhhhhhhHHHhcCCCcCCCCCCCCCCCCCCCCCcccccCCCccceeeccCchhHHHHHHHHHHhhhchHhHHH
Q 008858 137 LSTLKVNINKQKKDAFQILKPELEVDPNVNPHFDPRMGINKSKLLRPKRMTFQFVEEGKWSKEAEILRVKSQFGEAGAKE 216 (551)
Q Consensus 137 ~~TLKaNir~~k~e~~~~~k~~~~~~~~~npyfD~r~~~~~~k~~r~kr~~f~F~e~Gk~~k~Ae~lR~k~~l~e~~~e~ 216 (551)
.|+|..|++ ++ ... ...| .|++|+||++|+|++.|++.|.++++ ++
T Consensus 159 ~~~li~n~d-------------------------~~-~~~--~~~r-~rr~f~f~e~gkf~~~an~~r~~a~l-----e~ 204 (522)
T KOG2769|consen 159 LSGLIPNLD-------------------------PR-TKK--PRKR-GRRTFLFHESGKFIKLANRHRYKAQL-----ER 204 (522)
T ss_pred ccccccccC-------------------------hh-hcc--chhc-cccceeecccchHHHHHHHHHHHHHH-----HH
Confidence 888877754 33 111 2234 45699999999999999999988776 68
Q ss_pred HHHHHHHHHHhcCCCCCCcchHHHHhhhhccCCCCCCCCccccccccccCCCCCCCCCcccchhhhhccccccceeeCCC
Q 008858 217 RQAKQAQLAKAKGGTDINPNLIEVAERVITKEKPKDPIPEIEWWDAPLLLTGSYADISDDVTIEDKLKREKITIYVEHPR 296 (551)
Q Consensus 217 l~~~~a~~a~~k~~~~i~~~l~~~~~~~~~k~~~~~~iP~VEWWD~~iL~~~~y~~i~~~~~~~~~~~~~~it~yIeHPv 296 (551)
|+.++++++++. ||++ ++.++...+ .++||+|||||.+||+.+.|.+. +...+....||+|||||+
T Consensus 205 Lq~eis~~a~k~---gI~~-~~~la~~~p-----~~~iP~iEwwD~~il~~~d~~dE-----n~~~i~~~~it~~IeHP~ 270 (522)
T KOG2769|consen 205 LQNEISQAARKT---GIST-ATKLALIAP-----KDDIPAIEWWDSNILTNDDTIDE-----NHLKIDQSIITNLIEHPI 270 (522)
T ss_pred HHHHHHHHHHhc---CCch-hhhhhhccC-----CCCCchhhhhcccccccCCcccc-----cchhhhHHHHHHHhcCCc
Confidence 999999999853 5766 667777654 38999999999999998733322 223444578999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHH
Q 008858 297 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRS 376 (551)
Q Consensus 297 pi~pp~e~~~~~~~pl~LTKKEqKKlRRqrR~e~~kEkQdKIRLGL~PPP~PKVKLSNLMrVLg~eAV~DPTkvE~~VR~ 376 (551)
||.||.++..|+++|||||||||||||||||+|++||+|+||||||+|||+|||||||||+|||+|||||||+||++||.
T Consensus 271 ~~~PP~e~~~p~~l~vyLTKKErKKLRRQ~R~ea~KEkqekIrLGL~~ppePKVKiSNLMrVLgsEAiqDPTK~E~~VR~ 350 (522)
T KOG2769|consen 271 PMLPPAENLTPVSLPVYLTKKERKKLRRQRRKEARKEKQEKIRLGLEPPPEPKVKLSNLMRVLGSEAIQDPTKLEAEVRD 350 (522)
T ss_pred ccCCCcccCCCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHhhhccccCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHhhhcCCCCCCceEEEEEEEcCCCCCccccccccccccccceeEEEecCCceE
Q 008858 377 AAAEREQAHIDRNIARKLTPAERREKKERKLFDDPSSVETIVSVYKINDLSHPKTRFKVDVNAHENRLTGCAVICEGINV 456 (551)
Q Consensus 377 Qm~eR~~~He~~N~~RKLT~EqR~eKk~~K~~~d~~~~~v~~aVyrI~~Lsnp~~rFKV~~NAqQl~LtG~~l~~~~~~l 456 (551)
||++|+++||++|++||||++||++|+.+|+.+|+ +.||||+||+|++|+||++||||++||+||+||||||++.++||
T Consensus 351 Q~aeR~kaHe~~N~aRKLT~~qkreKk~rKl~ED~-st~v~~~V~r~K~l~~p~~rFKve~NAkql~ltG~~vl~~d~~v 429 (522)
T KOG2769|consen 351 QMAERQKAHEDENAARKLTPEQKREKKERKLFEDP-STGVHCSVYRIKNLQNPKKRFKVEMNAKQLQLTGVCVLHRDMNV 429 (522)
T ss_pred HHHHHHHHhhhhhhhhcCCHHHHHHHHHhhhccCC-CceEEEEEEEEecccCCccceeeeechhhhceeeeEEEecCCcE
Confidence 99999999999999999999999999999999998 57999999999999999999999999999999999999999999
Q ss_pred EEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCCCCeeEEecCCHHHHHHHHHhcC
Q 008858 457 VVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFNRFFVHECMTEAAAKKVFADAG 536 (551)
Q Consensus 457 VVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F~~w~~k~c~te~~Are~L~~~~ 536 (551)
||||||+||||||++|||+||||+|++.. ..++|++.+..+|+|+|||||++.+|+|++|+|+.|+|+.+||++|++||
T Consensus 430 vVvEGg~Ka~KkykrLMl~RIkW~e~~~~-k~d~~~e~~~~~N~C~lvWEG~~~rr~F~~~~~k~c~~e~~Ar~~f~k~g 508 (522)
T KOG2769|consen 430 VVVEGGPKAQKKYKRLMLKRIKWEEDFEL-KKDEDEEAVNGGNKCVLVWEGTVQRRSFREFKFKECPTEKMAREFFEKHG 508 (522)
T ss_pred EEEecCHHHHHHHHHHHHhhcCchhhhhh-cccchhhccCCCceEEEEeeccccCCcccceeEEecCcHHHHHHHHHHcc
Confidence 99999999999999999999999999631 22555677889999999999999999999999999999999999999999
Q ss_pred chhHHHHHhcccCC
Q 008858 537 VAHYWDLAVNFNDE 550 (551)
Q Consensus 537 ~ehyWdlA~~~~~~ 550 (551)
|+||||||+||+..
T Consensus 509 veHyWdLa~s~s~~ 522 (522)
T KOG2769|consen 509 VEHYWDLAYSYSVL 522 (522)
T ss_pred hHHHHHHHhhccCC
Confidence 99999999999863
No 2
>PF08572 PRP3: pre-mRNA processing factor 3 (PRP3); InterPro: IPR013881 Pre-mRNA processing factor 3 (PRP3) is a U4/U6-associated splicing factor. The human PRP3 has been implicated in autosomal retinitis pigmentosa [].
Probab=100.00 E-value=4.1e-73 Score=557.62 Aligned_cols=221 Identities=49% Similarity=0.805 Sum_probs=184.8
Q ss_pred CCCCCCCCCCCCcccccCCCccceeeccCchhHHHHHHHHHHhhhchHhHHHHHHHHHHHHHhcCCCCCCcchHHHHhhh
Q 008858 165 VNPHFDPRMGINKSKLLRPKRMTFQFVEEGKWSKEAEILRVKSQFGEAGAKERQAKQAQLAKAKGGTDINPNLIEVAERV 244 (551)
Q Consensus 165 ~npyfD~r~~~~~~k~~r~kr~~f~F~e~Gk~~k~Ae~lR~k~~l~e~~~e~l~~~~a~~a~~k~~~~i~~~l~~~~~~~ 244 (551)
+||||||++... +..++++++|+||++|+|+++|+++|.+++++ +++.++++.++.. ++.++. .+.+..
T Consensus 1 ~npy~d~~~~~~--~~~~r~~r~l~F~e~Gk~~~~a~~~R~~~~~e-----~~~~~~~~~~~~~---g~~~~~-~~~~~~ 69 (223)
T PF08572_consen 1 ENPYFDPRLKKS--KPKKRKRRALKFHEKGKFIKQAEQLRRKAQLE-----ELKKEIAEEARKA---GIQSAE-KLAEKI 69 (223)
T ss_pred CCCCcCCccccc--ccccCCCCCceecCcchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHc---CCchhh-HHHHhh
Confidence 599999999822 23455567999999999999999999988774 4555665555532 344322 344444
Q ss_pred hccCCCCCCCCccccccccccCCCCCCCCCcccchhhhhccccccceeeCCCCCCCCCCCCCCCC--CCCCCCHHHHHHH
Q 008858 245 ITKEKPKDPIPEIEWWDAPLLLTGSYADISDDVTIEDKLKREKITIYVEHPRPIEPPAEPAPPPP--QPLKLTKKEQKKL 322 (551)
Q Consensus 245 ~~k~~~~~~iP~VEWWD~~iL~~~~y~~i~~~~~~~~~~~~~~it~yIeHPvpi~pp~e~~~~~~--~pl~LTKKEqKKl 322 (551)
+..+...++||+|||||.+||++++|++++++........+..||+||||||||++|.+...+.+ +||||||||||||
T Consensus 70 ~~~~~~~~~iPdiEWWD~~~l~~~~y~~~~~~~~~~~~~~~~~It~~VeHPv~i~~p~~~~~~~~~~~~~~LTkkErKKl 149 (223)
T PF08572_consen 70 PKRELPEDEIPDIEWWDRPILPDPSYDDLNDESDLEIDEEESSITNYVEHPVPIKPPYEKNKPPPVVPPVYLTKKERKKL 149 (223)
T ss_pred cccccccccCCCccccchhhcCCCCccccccccchhcccchhhhhhhhhCCCCCCCccccccccccccCcccChHHHHHH
Confidence 44455568999999999999999999988765322222246789999999999999999665554 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHHHHHhccCCH
Q 008858 323 RTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLTP 396 (551)
Q Consensus 323 RRqrR~e~~kEkQdKIRLGL~PPP~PKVKLSNLMrVLg~eAV~DPTkvE~~VR~Qm~eR~~~He~~N~~RKLT~ 396 (551)
|||+|+++++|+||||||||+|||+|||||||||+|||++||+|||+||++||+||++|+++|+++|++||||+
T Consensus 150 Rr~rR~e~~kEkq~kIrlGL~ppP~PKVKlSNLMrVL~~eAV~DPT~vE~~Vr~Q~eeR~~~He~~N~~RkLt~ 223 (223)
T PF08572_consen 150 RRQRRQEKQKEKQDKIRLGLEPPPPPKVKLSNLMRVLGNEAVQDPTKVEAKVRKQMEERQQKHEERNEERKLTP 223 (223)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCcccHHHHHHHhhcchhcCcHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996
No 3
>PF06544 DUF1115: Protein of unknown function (DUF1115); InterPro: IPR010541 This entry represents the C terminus of several eukaryotic RWD domain-containing proteins of unknown function.
Probab=100.00 E-value=2.2e-42 Score=313.08 Aligned_cols=128 Identities=44% Similarity=0.755 Sum_probs=117.7
Q ss_pred EEEEEEcCCCCCccccccccccccccceeEEEecCCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCC
Q 008858 418 VSVYKINDLSHPKTRFKVDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKP 497 (551)
Q Consensus 418 ~aVyrI~~Lsnp~~rFKV~~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~ 497 (551)
|+||+|++|+||+|||||+.||+||+|||||++++++||||||||++||++|++||++||+|+++....+..+++..+..
T Consensus 1 ~~~~~I~~L~~p~~R~kI~~nA~ql~LtG~~~~g~~pgiIvvEG~~k~i~~y~~lmlrri~W~e~~~~~~~~~e~~~~~~ 80 (128)
T PF06544_consen 1 CYVHHIKSLSNPKKRFKIDKNAKQLHLTGFCLPGPKPGIIVVEGGEKSIKEYKKLMLRRIKWNEPKKITVREEEDEEDDS 80 (128)
T ss_pred CEEEEeCcccCHHHHHHHHHHHHHhCCeEEEEEcCCcEEEEEECCHHHHHHHHHHHhceecccccccccccccccccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999987654433333333347
Q ss_pred CCeeEEEEeeecCCCCCCCeeEEecCCHHHHHHHHHhcCchhHHHHHh
Q 008858 498 VNKCVLVWQGNVARPSFNRFFVHECMTEAAAKKVFADAGVAHYWDLAV 545 (551)
Q Consensus 498 ~N~C~LVWEG~vk~r~F~~w~~k~c~te~~Are~L~~~~~ehyWdlA~ 545 (551)
+|+|.|||||++..++|++|++..|.|+.+|+++|++||++||||+|+
T Consensus 81 ~n~c~~vweg~~~~r~F~~~~~~~~~~~~~~~~~L~~~~~~~~~~~a~ 128 (128)
T PF06544_consen 81 DNSCSLVWEGTVKKRAFKGFREKECEDESEARKFLREHGLEHYFDLAL 128 (128)
T ss_pred CCceeEEEeccccccCCCCceEEeCCCHHHHHHHHHHCCCHHHHHhhC
Confidence 999999999999999999999999999999999999999999999985
No 4
>PF04940 BLUF: Sensors of blue-light using FAD; InterPro: IPR007024 An FAD-binding domain, BLUF, exemplified by the N terminus of the AppA protein, (Q53119 from SWISSPROT), from Rhodobacter sphaeroides, is present in various proteins, primarily from Bacteria. The BLUF domain is involved in sensing blue-light (and possibly redox) using FAD and is similar to the flavin-binding PAS domains and cryptochromes. The predicted secondary structure reveals that the BLUF domain is a novel FAD-binding fold [].; PDB: 2IYG_A 2IYI_B 1X0P_A 2HFN_G 3MZI_A 2HFO_E 3GFZ_A 3GG1_B 2KB2_A 3GFY_A ....
Probab=95.97 E-value=0.0091 Score=52.13 Aligned_cols=66 Identities=20% Similarity=0.356 Sum_probs=54.6
Q ss_pred ccccccccceeEEEecCCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 008858 436 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 515 (551)
Q Consensus 436 ~~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F~ 515 (551)
..|-.++++||+-+++.+.-+=|+||.+.++.. +..||.= |..-..|..+-.|.+..|.|.
T Consensus 27 ~~~N~~~~iTG~Ll~~~~~F~Q~LEG~~~~v~~----l~~rI~~---------------D~RH~~v~~l~~~~i~~R~F~ 87 (93)
T PF04940_consen 27 RRNNRRHGITGFLLYDGGHFFQVLEGPEEAVDA----LFERIKQ---------------DPRHSNVVVLFRGPIEERRFP 87 (93)
T ss_dssp HHHHHHHTEEEEEEEETTEEEEEEEEEHHHHHH----HHHHHHT----------------TTEEEEEEEEEEEESS-SST
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEEECCHHHHHH----HHHHHhc---------------CCCcCCeEEEEeeecCCccCC
Confidence 346678999999999999999999999999987 4577762 333457999999999999999
Q ss_pred CeeEE
Q 008858 516 RFFVH 520 (551)
Q Consensus 516 ~w~~k 520 (551)
+|.|.
T Consensus 88 ~W~M~ 92 (93)
T PF04940_consen 88 DWSMG 92 (93)
T ss_dssp SCSSE
T ss_pred CCcCC
Confidence 99986
No 5
>PRK14432 acylphosphatase; Provisional
Probab=70.85 E-value=4.3 Score=35.65 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=35.0
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEe-cchhHHHHHhhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVE-GGSKSIKRYGKLMLR 475 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVE-Gg~KsikkYkkLMl~ 475 (551)
-|+-+..-|++++|+|.|. +.++-=-|+++ |.+.++..|.+++.+
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~~~v~~f~~~l~~ 63 (93)
T PRK14432 17 FRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTKEQMKKFEKLLKN 63 (93)
T ss_pred ehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHh
Confidence 3666778899999999885 55553457777 999999999876654
No 6
>PRK14436 acylphosphatase; Provisional
Probab=69.89 E-value=4.5 Score=35.36 Aligned_cols=45 Identities=16% Similarity=0.224 Sum_probs=36.8
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
.|+-+..-|.+++|+|.|. +.++-=-|+++|.+.++..|.+++.+
T Consensus 19 FR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 64 (91)
T PRK14436 19 FRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQ 64 (91)
T ss_pred cHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHhh
Confidence 5777888999999999885 55553468889999999999887753
No 7
>PRK14421 acylphosphatase; Provisional
Probab=69.60 E-value=4.4 Score=36.15 Aligned_cols=44 Identities=16% Similarity=0.049 Sum_probs=35.9
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+=|...|.+++|+|.|. +.++-=.|+|+|.+.++..|.+.+.
T Consensus 19 FR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 63 (99)
T PRK14421 19 YRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADAVAEMIARCR 63 (99)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHHHHHHHHHHH
Confidence 4677888999999999885 5555447889999999999887764
No 8
>PRK14452 acylphosphatase; Provisional
Probab=68.61 E-value=4.9 Score=36.41 Aligned_cols=48 Identities=19% Similarity=0.130 Sum_probs=38.4
Q ss_pred CccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhhc
Q 008858 429 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 476 (551)
Q Consensus 429 p~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~R 476 (551)
=--|+-+...|.+++|+|-|. +.++-=.|+++|.+.++..|.+|+.+-
T Consensus 33 VGFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~~ve~F~~~l~~g 81 (107)
T PRK14452 33 VGFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPLALSELRAWCERG 81 (107)
T ss_pred cChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhcC
Confidence 346888999999999999885 555544788899999999997776553
No 9
>PRK14420 acylphosphatase; Provisional
Probab=68.17 E-value=5.1 Score=34.71 Aligned_cols=46 Identities=20% Similarity=0.317 Sum_probs=37.0
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhhc
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 476 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~R 476 (551)
-|+-+-..|.+++|+|.|- +.++-=-|+++|.+.++..|...+..-
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~ 63 (91)
T PRK14420 17 FRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPEEALQLFLDAIEKG 63 (91)
T ss_pred ChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECHHHHHHHHHHHHhC
Confidence 4677788899999999985 445545799999999999998877653
No 10
>PRK14441 acylphosphatase; Provisional
Probab=67.75 E-value=5.5 Score=34.90 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=35.5
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+-+...|.+|+|+|-|- ..++-=.|+++|.+.++..|..++.
T Consensus 20 FR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~ 64 (93)
T PRK14441 20 FRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERAAVGALVRWCH 64 (93)
T ss_pred chHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHHHHHHHHHHHh
Confidence 4677888999999999885 5555347889999999999877763
No 11
>PRK14424 acylphosphatase; Provisional
Probab=66.80 E-value=5.4 Score=35.24 Aligned_cols=45 Identities=20% Similarity=0.237 Sum_probs=37.5
Q ss_pred ccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 430 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 430 ~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-.|+-|...|.+++|+|.|- +.++-=-|+++|.+.++..|.+.+.
T Consensus 21 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~v~~f~~~l~ 66 (94)
T PRK14424 21 GFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQIDRMLAWLR 66 (94)
T ss_pred chHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHH
Confidence 46788889999999999885 5555457999999999999988874
No 12
>PRK14430 acylphosphatase; Provisional
Probab=66.41 E-value=5.8 Score=34.79 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=36.0
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLM 473 (551)
.|+-+...|++|+|+|.|. +.++-=-|+++|.+.++..|...+
T Consensus 19 FR~~~~~~A~~lgl~G~VrN~~dGsVei~~qG~~~~i~~f~~~l 62 (92)
T PRK14430 19 YRAACADAADDLGLGGWVRNRADGTVEVMASGTVRQLEALRAWM 62 (92)
T ss_pred eHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHH
Confidence 5788889999999999985 555545799999999999987776
No 13
>PRK14427 acylphosphatase; Provisional
Probab=66.32 E-value=5.7 Score=34.91 Aligned_cols=46 Identities=22% Similarity=0.256 Sum_probs=37.0
Q ss_pred ccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 430 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 430 ~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
--|+=+...|.+++|+|.|. +.++-=-|+++|.+.++..|...+..
T Consensus 20 GFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~i~~f~~~l~~ 66 (94)
T PRK14427 20 GFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQVEKLLDWLNS 66 (94)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHhh
Confidence 35778888999999999885 55553468899999999998777764
No 14
>PRK14445 acylphosphatase; Provisional
Probab=65.72 E-value=6.5 Score=34.21 Aligned_cols=44 Identities=25% Similarity=0.237 Sum_probs=36.0
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+-+..-|.+++|+|.|- +.++-=-|+++|.+.++..|...+.
T Consensus 19 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~ 63 (91)
T PRK14445 19 FRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGMIDELIKQAE 63 (91)
T ss_pred ChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHH
Confidence 5777888899999999885 5555446889999999999988774
No 15
>PRK14449 acylphosphatase; Provisional
Probab=65.15 E-value=6.1 Score=34.32 Aligned_cols=45 Identities=29% Similarity=0.359 Sum_probs=37.0
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
-|+-|...|.+++|+|.|. +.++-=.|+++|.+.++..|.+.+..
T Consensus 18 FR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~ 63 (90)
T PRK14449 18 LRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDEENIKELINFIKT 63 (90)
T ss_pred hHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhh
Confidence 4677888999999999885 55554579999999999999887754
No 16
>PRK14442 acylphosphatase; Provisional
Probab=65.07 E-value=6.8 Score=34.18 Aligned_cols=44 Identities=23% Similarity=0.187 Sum_probs=35.9
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+=+..-|.+++|+|-|- +.++-=-|+++|.+.++..|.+++.
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~ 63 (91)
T PRK14442 19 FRQATREEADRLELDGWVRNLDDGRVEVVWEGEEDRAKALERWLG 63 (91)
T ss_pred ccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHh
Confidence 4667778899999999885 6666447888999999999988874
No 17
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=64.91 E-value=7.1 Score=34.53 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=38.8
Q ss_pred CCCccccccccccccccceeEEEecCCce-EEEEecchhHHHHHhhhhh
Q 008858 427 SHPKTRFKVDVNAHENRLTGCAVICEGIN-VVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 427 snp~~rFKV~~NAqQl~LtG~~l~~~~~~-lVVVEGg~KsikkYkkLMl 474 (551)
..=-.|+-+..=|..|+|+|.+--.+|-+ -||++|-..++.+|...+-
T Consensus 15 QGVGFR~~~~~~A~~lgl~G~V~N~~DGsVeiva~G~~~~v~~~~~~l~ 63 (92)
T COG1254 15 QGVGFRYFTRSEALRLGLTGWVKNLDDGSVEIVAEGPDEAVEKFIEWLR 63 (92)
T ss_pred ccccHHHHHHHHHHHCCCEEEEEECCCCeEEEEEEcCHHHHHHHHHHHH
Confidence 34446788888899999999997555444 6999999999999888776
No 18
>PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3.6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A ....
Probab=64.61 E-value=5.9 Score=33.95 Aligned_cols=50 Identities=20% Similarity=0.162 Sum_probs=38.5
Q ss_pred CccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhhccC
Q 008858 429 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRRID 478 (551)
Q Consensus 429 p~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~RIk 478 (551)
=--|+-|..-|.+++|+|.|- +.++-=.|+++|.+..+..|...+..--.
T Consensus 17 VgFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~~~l~~f~~~l~~g~p 67 (91)
T PF00708_consen 17 VGFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEEEQLEEFIKWLKKGPP 67 (91)
T ss_dssp SSHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEHHHHHHHHHHHHHSST
T ss_pred CChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCHHHHHHHHHHHHhCCC
Confidence 345777788899999999885 55665689999999999999888877433
No 19
>PRK14429 acylphosphatase; Provisional
Probab=64.04 E-value=6.6 Score=34.09 Aligned_cols=46 Identities=13% Similarity=0.093 Sum_probs=37.0
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhhc
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 476 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~R 476 (551)
-|+-+..-|++++|+|.|. +.++-=.|+++|.+.++..|...+.+.
T Consensus 17 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~g 63 (90)
T PRK14429 17 CRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPAVDNLIAWCEVG 63 (90)
T ss_pred eHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhC
Confidence 3667778899999999885 555545789999999999998887654
No 20
>PRK14440 acylphosphatase; Provisional
Probab=64.03 E-value=6.9 Score=34.12 Aligned_cols=44 Identities=23% Similarity=0.230 Sum_probs=35.0
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+-+...|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 18 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~ 62 (90)
T PRK14440 18 FRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIK 62 (90)
T ss_pred chHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHh
Confidence 5777888999999999874 4555346889999999999876664
No 21
>PRK14435 acylphosphatase; Provisional
Probab=63.98 E-value=6.6 Score=34.21 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=35.9
Q ss_pred cccccccccccccceeEEEe-cCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAVI-CEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l~-~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+-|...|.+++|+|.|.= .++-=-|+++|.+..+..|.+.+.
T Consensus 17 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 61 (90)
T PRK14435 17 FRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDENALRRFLNEVA 61 (90)
T ss_pred ChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHh
Confidence 47778889999999998864 445457889999999999887774
No 22
>PRK14448 acylphosphatase; Provisional
Probab=62.92 E-value=7.1 Score=34.01 Aligned_cols=44 Identities=18% Similarity=0.182 Sum_probs=36.2
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+-|...|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~ 61 (90)
T PRK14448 17 FRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSDAQIAAFRDWLQ 61 (90)
T ss_pred hHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCHHHHHHHHHHHH
Confidence 4677888999999999885 5555447899999999999888773
No 23
>PRK14437 acylphosphatase; Provisional
Probab=62.84 E-value=7 Score=35.50 Aligned_cols=46 Identities=26% Similarity=0.182 Sum_probs=37.5
Q ss_pred CCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhh
Q 008858 428 HPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 428 np~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLM 473 (551)
-=--|+=+...|.+++|+|-|. +.++-=.|+|+|.+.++..|..++
T Consensus 35 GVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~ie~f~~~L 81 (109)
T PRK14437 35 GVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWL 81 (109)
T ss_pred CcCchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHHHHHHHHHHH
Confidence 3446888899999999999885 555645788899999999987776
No 24
>PRK14426 acylphosphatase; Provisional
Probab=62.82 E-value=7.2 Score=34.05 Aligned_cols=45 Identities=22% Similarity=0.275 Sum_probs=36.4
Q ss_pred ccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 430 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 430 ~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
--|+-+..-|.+++|+|.|. +.++-=-|+++|.+..+..|.+.+-
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 63 (92)
T PRK14426 18 GFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEEQVEKLMEWLK 63 (92)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHHHHHHHHHHHh
Confidence 35778888999999999885 4555346889999999999988774
No 25
>PRK10363 cpxP periplasmic repressor CpxP; Reviewed
Probab=62.73 E-value=41 Score=33.04 Aligned_cols=77 Identities=21% Similarity=0.336 Sum_probs=47.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 008858 308 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 387 (551)
Q Consensus 308 ~~~pl~LTKKEqKKlRRqrR~e~~kEkQdKIRLGL~PPP~PKVKLSNLMrVLg~eAV~DPTkvE~~VR~Qm~eR~~~He~ 387 (551)
....|-||...|..+|-..+..+.. .|++ .---..-|-.++..+.+ =|+.||.|+++-.+++.+
T Consensus 45 MF~gLdLTdaQRqQmRdLm~~~r~~----------~~~~-~~~er~amh~LI~ad~F-----DEaavra~a~kma~~~~e 108 (166)
T PRK10363 45 MFDGISLTEHQRQQMRDLMQQARHE----------QPPV-NVSEMETMHRLVTAENF-----DENAVRAQAEKMAQEQVA 108 (166)
T ss_pred cccCCCCCHHHHHHHHHHHHHHHhc----------cccc-CHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHHHHH
Confidence 3467999998888888776555431 1221 21123334455655554 366777777777666666
Q ss_pred HHHhc---------cCCHHHHH
Q 008858 388 RNIAR---------KLTPAERR 400 (551)
Q Consensus 388 ~N~~R---------KLT~EqR~ 400 (551)
+-.+| =|||||+.
T Consensus 109 ~~Vem~k~~nqmy~lLTPEQKa 130 (166)
T PRK10363 109 RQVEMAKVRNQMYRLLTPEQQA 130 (166)
T ss_pred HHHHHHHHHHHHHHhCCHHHHH
Confidence 65554 49999974
No 26
>PRK10455 periplasmic protein; Reviewed
Probab=61.90 E-value=41 Score=32.52 Aligned_cols=75 Identities=20% Similarity=0.402 Sum_probs=40.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHHHH
Q 008858 310 QPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRN 389 (551)
Q Consensus 310 ~pl~LTKKEqKKlRRqrR~e~~kEkQdKIRLGL~PPP~PKVKLSNLMrVLg~eAV~DPTkvE~~VR~Qm~eR~~~He~~N 389 (551)
..|-||..-|.++|...+..+..-++ | -+--...|+.++.++.+ | |+.||.++++..+.|.++=
T Consensus 53 ~~L~LT~~Qrqqir~im~~~r~~~~~----------~-~~~~r~~l~~li~ad~F-D----eaavra~~~k~~~~~~~~~ 116 (161)
T PRK10455 53 KGLNLTDAQKQQIRDIMKAQRDQMKR----------P-PLEERRAMHDIIASDTF-D----KAKAEAQITKMEAQRKARM 116 (161)
T ss_pred hhCCCCHHHHHHHHHHHHHHHHhhcc----------c-cHHHHHHHHHHHccCcc-C----HHHHHHHHHHHHHHHHHHH
Confidence 45899999999999766654433210 1 11122345555555432 4 4555555544333333222
Q ss_pred Hh---------ccCCHHHHH
Q 008858 390 IA---------RKLTPAERR 400 (551)
Q Consensus 390 ~~---------RKLT~EqR~ 400 (551)
.+ --||||||.
T Consensus 117 ~~~~~~~~qiy~vLTPEQr~ 136 (161)
T PRK10455 117 LAHMETQNKIYNVLTPEQKK 136 (161)
T ss_pred HHHHHHHHHHHHhCCHHHHH
Confidence 22 269999985
No 27
>PRK14433 acylphosphatase; Provisional
Probab=61.70 E-value=8.2 Score=33.47 Aligned_cols=44 Identities=30% Similarity=0.332 Sum_probs=35.2
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
.|+=|-..|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 16 FR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 60 (87)
T PRK14433 16 YRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKEALERLLHWLR 60 (87)
T ss_pred chHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHh
Confidence 4666778899999999875 5555346889999999999887774
No 28
>PRK14438 acylphosphatase; Provisional
Probab=61.13 E-value=8.3 Score=33.61 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=34.4
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLM 473 (551)
-|+=+...|.+++|+|-|- +.++-=.|+++|.+.++..|...+
T Consensus 18 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l 61 (91)
T PRK14438 18 FRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEETDVAALIDWC 61 (91)
T ss_pred ccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECHHHHHHHHHHH
Confidence 4566778899999999885 555544789999999999987666
No 29
>PRK14423 acylphosphatase; Provisional
Probab=60.56 E-value=8.5 Score=33.59 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=36.4
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhhc
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 476 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~R 476 (551)
-|+=+...|++++|+|.|. +.++-=.|+++|.+.++..|...+.+.
T Consensus 20 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~g 66 (92)
T PRK14423 20 YRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRDAVEAMVEWCHEG 66 (92)
T ss_pred ehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhC
Confidence 4667778899999999985 555534678999999999987777643
No 30
>PRK14450 acylphosphatase; Provisional
Probab=59.65 E-value=9 Score=33.29 Aligned_cols=43 Identities=28% Similarity=0.288 Sum_probs=34.2
Q ss_pred cccccccccccccceeEEE-ecCCc-eEEEEecchhHHHHHhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGI-NVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~-~lVVVEGg~KsikkYkkLM 473 (551)
-|+-+...|.+++|+|.|. +.++- =-|+++|.+.++..|...+
T Consensus 17 FR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l 61 (91)
T PRK14450 17 FRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLL 61 (91)
T ss_pred cHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHH
Confidence 4677788899999999874 55652 3467999999999987776
No 31
>PRK14422 acylphosphatase; Provisional
Probab=59.26 E-value=9.6 Score=33.42 Aligned_cols=46 Identities=28% Similarity=0.304 Sum_probs=37.2
Q ss_pred ccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 430 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 430 ~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
-.|+=+..-|.+++|+|.|- +.++-=-|+++|.+.++..|.+.+..
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~ 66 (93)
T PRK14422 20 GFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAACEKLLQLLRG 66 (93)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHHh
Confidence 35777888999999999885 55563468899999999999877754
No 32
>PRK14451 acylphosphatase; Provisional
Probab=58.60 E-value=9.5 Score=33.21 Aligned_cols=45 Identities=16% Similarity=0.210 Sum_probs=36.6
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
-|+-+...|.+++|+|-|- +.++-=-|+++|.+.++..|..++.+
T Consensus 18 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 63 (89)
T PRK14451 18 FRASAKKLAEQLMISGWARNLADGRVEVFACGKEDKLEEFYTWLQK 63 (89)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhh
Confidence 5777888999999999885 55664468889999999998887753
No 33
>PRK14425 acylphosphatase; Provisional
Probab=58.21 E-value=9.8 Score=33.44 Aligned_cols=44 Identities=18% Similarity=0.102 Sum_probs=35.9
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+-+...|.+++|+|-|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 21 FR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~le~f~~~l~ 65 (94)
T PRK14425 21 FRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSAISAMIERFR 65 (94)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHh
Confidence 5778888999999999885 5566457889999999999877663
No 34
>PRK14443 acylphosphatase; Provisional
Probab=57.69 E-value=11 Score=33.30 Aligned_cols=45 Identities=9% Similarity=0.189 Sum_probs=36.9
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
-|+-+...|.+++|+|-|. +.++-=-|+++|.+..+..|.+.+..
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~ 64 (93)
T PRK14443 19 FRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEENLNKFIDAIKK 64 (93)
T ss_pred CcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHhc
Confidence 5777888999999999885 56664578889999999999887744
No 35
>PRK14446 acylphosphatase; Provisional
Probab=56.86 E-value=12 Score=32.73 Aligned_cols=43 Identities=21% Similarity=0.219 Sum_probs=34.5
Q ss_pred ccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 432 RFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 432 rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
|+=+...|++++|||-|. ..++-=.|+++|.+.++..|-.++.
T Consensus 18 R~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~l~~f~~~l~ 61 (88)
T PRK14446 18 RASTRERAVALGLVGHARNQADGSVEVVAAGSAAALEALEAWLW 61 (88)
T ss_pred hHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHHHHHHHHHHHh
Confidence 566777899999999886 5566457888999999999877765
No 36
>PRK14444 acylphosphatase; Provisional
Probab=56.63 E-value=11 Score=32.96 Aligned_cols=45 Identities=18% Similarity=0.203 Sum_probs=36.3
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
-|+=+..-|.+|+|+|-|- +.++-=-|+++|.+.++..|...+.+
T Consensus 19 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 64 (92)
T PRK14444 19 FRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSRPAVQKMISWCYS 64 (92)
T ss_pred cHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHh
Confidence 4666778899999999885 55664479999999999999887653
No 37
>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed
Probab=56.38 E-value=60 Score=31.59 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=48.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHH---
Q 008858 309 PQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAH--- 385 (551)
Q Consensus 309 ~~pl~LTKKEqKKlRRqrR~e~~kEkQdKIRLGL~PPP~PKVKLSNLMrVLg~eAV~DPTkvE~~VR~Qm~eR~~~H--- 385 (551)
...+-||...|..||...+..+... |.+. .--..-|-.++..+. =||.+|++.+.++.+.+...+
T Consensus 52 f~~l~LTd~QR~qmr~im~~~r~~~----------~~~~-~~~~~~m~~Li~Ad~-FDeaAvra~~~kma~~~~e~~v~~ 119 (162)
T PRK12751 52 FDGINLTEQQRQQMRDLMRQSHQSQ----------PRLD-LEDREAMHKLITADK-FDEAAVRAQAEKMSQNQIERHVEM 119 (162)
T ss_pred hccCCCCHHHHHHHHHHHHHhhhcc----------cchh-HHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999999998777665531 1110 111222445566655 599999888776655544332
Q ss_pred -HHHHHh-ccCCHHHHH
Q 008858 386 -IDRNIA-RKLTPAERR 400 (551)
Q Consensus 386 -e~~N~~-RKLT~EqR~ 400 (551)
+.+|+- .-||||||.
T Consensus 120 ~~~~~qmy~lLTPEQra 136 (162)
T PRK12751 120 AKVRNQMYNLLTPEQKE 136 (162)
T ss_pred HHHHHHHHHcCCHHHHH
Confidence 333433 359999974
No 38
>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H.
Probab=53.08 E-value=91 Score=26.49 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=42.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH--HHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHH----HHHH
Q 008858 311 PLKLTKKEQKKLRTQRRLAREKDR--QEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAE----REQA 384 (551)
Q Consensus 311 pl~LTKKEqKKlRRqrR~e~~kEk--QdKIRLGL~PPP~PKVKLSNLMrVLg~eAV~DPTkvE~~VR~Qm~e----R~~~ 384 (551)
.+-||...+.++|...+....+-. +..++ .+-.-|...|..+ --||-++++.+.+-.+. +...
T Consensus 39 ~l~Lt~eQ~~~l~~~~~~~~~~~~~~r~~~~----------~~r~~l~~ll~~~-~~D~~~i~a~~~~~~~~~~~l~~~~ 107 (125)
T PF13801_consen 39 MLNLTPEQQAKLRALMDEFRQEMRALRQELR----------AARQELRALLAAP-PPDEAAIEALLEEIREAQAELRQER 107 (125)
T ss_dssp HS-TTHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHCCS-SS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999976554433222 22222 2333455555554 45778887776554333 2333
Q ss_pred HHHHHHhc-cCCHHHHH
Q 008858 385 HIDRNIAR-KLTPAERR 400 (551)
Q Consensus 385 He~~N~~R-KLT~EqR~ 400 (551)
+....+.+ -||||||.
T Consensus 108 ~~~~~~~~~~LtpeQR~ 124 (125)
T PF13801_consen 108 LEHLLEIRAVLTPEQRA 124 (125)
T ss_dssp HHHHHHHHHTT-GGGHH
T ss_pred HHHHHHHHHcCCHHHhC
Confidence 33344444 49999985
No 39
>PRK14434 acylphosphatase; Provisional
Probab=50.92 E-value=15 Score=32.19 Aligned_cols=45 Identities=13% Similarity=0.156 Sum_probs=34.4
Q ss_pred ccccccccccccc-ceeEEE-ecCCceEEEEecch-hHHHHHhhhhhh
Q 008858 431 TRFKVDVNAHENR-LTGCAV-ICEGINVVVVEGGS-KSIKRYGKLMLR 475 (551)
Q Consensus 431 ~rFKV~~NAqQl~-LtG~~l-~~~~~~lVVVEGg~-KsikkYkkLMl~ 475 (551)
-|+-|-..|++|+ |+|-|. +.++-=.|+++|.+ .++..|-..+.+
T Consensus 17 FR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~ 64 (92)
T PRK14434 17 FRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRK 64 (92)
T ss_pred EhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhc
Confidence 3667778899999 999885 55553468889987 699988776644
No 40
>PF08690 GET2: GET complex subunit GET2; InterPro: IPR014802 This family corresponds to the GET complex subunit GET2. The GET complex is involved in the retrieval of ER resident proteins from the Golgi []. ; PDB: 3SJD_D 3ZS9_C.
Probab=50.92 E-value=12 Score=39.51 Aligned_cols=26 Identities=38% Similarity=0.581 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHHHHHH-----HHHHHHH
Q 008858 314 LTKKEQKKLRTQRRLAREK-----DRQEMIR 339 (551)
Q Consensus 314 LTKKEqKKlRRqrR~e~~k-----EkQdKIR 339 (551)
||..|++||||.||+++-+ .+=+||-
T Consensus 2 ls~aEkrRLrRERReAKi~~GgaSaRLnKIT 32 (302)
T PF08690_consen 2 LSEAEKRRLRRERREAKIKAGGASARLNKIT 32 (302)
T ss_dssp --HHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCcHHHHHHHh
Confidence 7899999999999999986 3556664
No 41
>PRK14428 acylphosphatase; Provisional
Probab=50.81 E-value=15 Score=32.62 Aligned_cols=45 Identities=13% Similarity=0.153 Sum_probs=35.9
Q ss_pred ccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 430 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 430 ~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
--|+-+-.-|++++|+|.|. ..++-=.|+++|.+.++..|-..+.
T Consensus 22 GFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~~~i~~fi~~l~ 67 (97)
T PRK14428 22 GFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSSDAVQALVEQLA 67 (97)
T ss_pred cchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCHHHHHHHHHHHh
Confidence 35777888899999999885 5555457889999999999866664
No 42
>PRK14439 acylphosphatase; Provisional
Probab=49.96 E-value=16 Score=35.77 Aligned_cols=45 Identities=22% Similarity=0.288 Sum_probs=37.4
Q ss_pred cccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
.|+-|...|.|++|+|-|. +.+|-=-|+++|.+.++..|.+.+.+
T Consensus 90 FR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~Ie~Fi~~L~~ 135 (163)
T PRK14439 90 FRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKS 135 (163)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhh
Confidence 5777888999999999884 56664468889999999999888875
No 43
>PRK14431 acylphosphatase; Provisional
Probab=49.55 E-value=21 Score=31.11 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=34.3
Q ss_pred ccccccccccccceeEEEecCCceEEEEecchhHHHHHhhhhhh
Q 008858 432 RFKVDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 432 rFKV~~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
|+=+..-|++++|||-|.=.++-=.|+++|.+.++..|...+.+
T Consensus 18 R~~~~~~A~~~gl~G~V~N~~dgVei~~qG~~~~l~~f~~~l~~ 61 (89)
T PRK14431 18 RYFTQRIAMNYNIVGTVQNVDDYVEIYAQGDDADLERFIQGVIE 61 (89)
T ss_pred hHHHHHHHhhcCCEEEEEECCCcEEEEEEcCHHHHHHHHHHHhc
Confidence 56667789999999988533442468999999999998777654
No 44
>PRK14447 acylphosphatase; Provisional
Probab=49.26 E-value=17 Score=31.91 Aligned_cols=44 Identities=18% Similarity=0.179 Sum_probs=34.7
Q ss_pred cccccccccccccceeEEE-ecCC-ceEEEEecchhHHHHHhhhhh
Q 008858 431 TRFKVDVNAHENRLTGCAV-ICEG-INVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 431 ~rFKV~~NAqQl~LtG~~l-~~~~-~~lVVVEGg~KsikkYkkLMl 474 (551)
-|+=+...|.+++|+|.|- +.++ -=-|+++|.+.++..|-.++.
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~~~~l~~f~~~l~ 64 (95)
T PRK14447 19 FRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGPRDAVLKVIEWAR 64 (95)
T ss_pred chHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHh
Confidence 4677788899999999885 5555 235778999999999877664
No 45
>KOG3360 consensus Acylphosphatase [Energy production and conversion]
Probab=41.02 E-value=51 Score=29.81 Aligned_cols=68 Identities=18% Similarity=0.240 Sum_probs=47.3
Q ss_pred cccccccceeEEEec-CCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 008858 437 VNAHENRLTGCAVIC-EGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 515 (551)
Q Consensus 437 ~NAqQl~LtG~~l~~-~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F~ 515 (551)
.+|++|+|+|-|.=. ++---=-+||-+..+..++.+++.|=.= ...-..|+.-=++++.+..|.
T Consensus 29 ~~a~~lGlrGWv~Nt~~GtvkG~leGp~~~vd~mk~wl~~~gsP---------------~s~I~~~ef~n~kei~~~~y~ 93 (98)
T KOG3360|consen 29 DEAKKLGLRGWVMNTSEGTVKGQLEGPPEKVDEMKEWLLTRGSP---------------VSAIDRAEFSNQKEISRYTYK 93 (98)
T ss_pred HHHHhhcceEEEEecCCceEEEEEeCCHHHHHHHHHHHHhcCCh---------------hHheeeeeecccceecccccc
Confidence 489999999999644 4544457899999999999999976211 112234555555666777777
Q ss_pred CeeE
Q 008858 516 RFFV 519 (551)
Q Consensus 516 ~w~~ 519 (551)
.|.+
T Consensus 94 ~F~I 97 (98)
T KOG3360|consen 94 DFSI 97 (98)
T ss_pred eeee
Confidence 7754
No 46
>PHA00431 internal virion protein C
Probab=30.33 E-value=39 Score=39.29 Aligned_cols=75 Identities=32% Similarity=0.402 Sum_probs=42.1
Q ss_pred chhhhhhhhhccccCCCChHHHHHHHHHHH--HHHHHHHHHHH-hccCCHHHHHHHHHhhhcCCCCCCceEEEEEEEcCC
Q 008858 350 VKMSNLMKVLGSEATQDPTRLEKEIRSAAA--EREQAHIDRNI-ARKLTPAERREKKERKLFDDPSSVETIVSVYKINDL 426 (551)
Q Consensus 350 VKLSNLMrVLg~eAV~DPTkvE~~VR~Qm~--eR~~~He~~N~-~RKLT~EqR~eKk~~K~~~d~~~~~v~~aVyrI~~L 426 (551)
|.=|||..-||.=+-.- +..-.+.. .+.++.|+-|+ -|||||||||+-.. | | +.+|-=..-
T Consensus 38 ~~~s~ll~sl~~f~~aG-----~~ay~~y~~~~k~~AdERSNEIIRKLTPEQrReAi~-----n----G--TLLYQDDPY 101 (746)
T PHA00431 38 VGQSNLLESLGKFAKAG-----ADAYGAYDERRKDKADERSNEIIRKLTPEQRREAIK-----N----G--TLLYQDDPY 101 (746)
T ss_pred cCCchHHHHHHHHHHHh-----HHHHHHHHHHHHHhHhhhHHHHHHhcCHHHHHHHHh-----c----C--ceeecCCHH
Confidence 66677777665421100 00112222 34456777786 59999999987431 1 2 445654444
Q ss_pred CCCccccccccccc
Q 008858 427 SHPKTRFKVDVNAH 440 (551)
Q Consensus 427 snp~~rFKV~~NAq 440 (551)
.=-..|||...||-
T Consensus 102 AMeALr~KtGRnaA 115 (746)
T PHA00431 102 AMEALRFKTGRNAA 115 (746)
T ss_pred HHHHHHHHhccchh
Confidence 44466777777763
No 47
>COG5154 BRX1 RNA-binding protein required for 60S ribosomal subunit biogenesis [Translation, ribosomal structure and biogenesis]
Probab=26.39 E-value=58 Score=33.41 Aligned_cols=40 Identities=25% Similarity=0.302 Sum_probs=35.0
Q ss_pred hccccCCCChHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Q 008858 359 LGSEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLTPAE 398 (551)
Q Consensus 359 Lg~eAV~DPTkvE~~VR~Qm~eR~~~He~~N~~RKLT~Eq 398 (551)
+.++..--||-|-+.+|.|.+++..+..+.|.+|+.-+.|
T Consensus 231 Ykn~~~vs~~~vra~ir~qaae~~~~R~es~~er~vr~~~ 270 (283)
T COG5154 231 YKNETFVSSTMVRAAIRNQAAENLFARKESNLERQVRAQQ 270 (283)
T ss_pred eecccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhc
Confidence 4567788899999999999999999999999999876544
No 48
>PF12396 DUF3659: Protein of unknown function (DUF3659) ; InterPro: IPR022124 This domain family is found in bacteria and eukaryotes, and is approximately 70 amino acids in length.
Probab=25.17 E-value=44 Score=27.83 Aligned_cols=20 Identities=35% Similarity=0.634 Sum_probs=16.0
Q ss_pred eEecCCCCeeccCCCeeecc
Q 008858 113 LRVDALGREIDEHGNVVNRT 132 (551)
Q Consensus 113 L~lD~~GR~iD~~G~vI~~~ 132 (551)
..+|++|..+|.+|++|-..
T Consensus 37 ~~vd~~G~I~d~~G~viGka 56 (64)
T PF12396_consen 37 KKVDEDGDILDKDGNVIGKA 56 (64)
T ss_pred CcCCCCCCEECCCCCEEEEE
Confidence 34789999999999998643
No 49
>PRK05320 rhodanese superfamily protein; Provisional
Probab=20.46 E-value=1.1e+02 Score=31.54 Aligned_cols=59 Identities=22% Similarity=0.359 Sum_probs=48.0
Q ss_pred eEEEEEEEcCCCCCc-cccccccccccccceeEEEecC-CceEEEEecchhHHHHHhhhhhh
Q 008858 416 TIVSVYKINDLSHPK-TRFKVDVNAHENRLTGCAVICE-GINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 416 v~~aVyrI~~Lsnp~-~rFKV~~NAqQl~LtG~~l~~~-~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
+.++.|++-.|.||. .+-.+....+.++|+|-+++.+ |+|--| -|....|..|-..|..
T Consensus 4 ~~~~~Y~f~~i~~~~~~~~~~~~~~~~~~~~G~i~ia~eGiN~t~-~g~~~~id~~~~~l~~ 64 (257)
T PRK05320 4 VNIAAYKFVSLDDPETLRPLVLARCEALGLKGTILLAPEGINLFL-AGTREAIDAFYAWLRA 64 (257)
T ss_pred EEEEEEceeecCCHHHHHHHHHHHHHHCCCeEEEEEcCCCceEEE-EeeHHHHHHHHHHHhh
Confidence 468899999999974 4556777889999999998875 999766 6778888998877765
Done!