Query 008858
Match_columns 551
No_of_seqs 150 out of 215
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 13:22:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008858.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008858hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yrx_A Hypothetical protein RS 96.9 0.0018 6.1E-08 58.1 7.3 85 436-551 30-114 (121)
2 2iyg_A APPA, antirepressor of 96.1 0.0073 2.5E-07 54.4 6.0 79 435-532 41-119 (124)
3 2hfn_A Synechocystis photorece 95.7 0.014 4.9E-07 54.0 6.0 84 435-537 31-118 (153)
4 1x0p_A Hypothetical protein TL 95.6 0.0077 2.6E-07 55.2 4.0 83 436-537 29-115 (143)
5 2byc_A Blue-light receptor of 95.0 0.026 8.8E-07 51.6 5.2 72 436-526 31-102 (137)
6 3gfz_A Klebsiella pneumoniae B 92.1 0.21 7.3E-06 52.1 6.8 85 437-541 37-126 (413)
7 2lxf_A Uncharacterized protein 78.1 2.6 9E-05 37.6 5.1 61 413-473 30-92 (121)
8 1aps_A Acylphosphatase; hydrol 77.5 5.1 0.00017 34.0 6.5 54 420-473 10-65 (98)
9 2vh7_A Acylphosphatase-1; hydr 76.3 3.8 0.00013 34.9 5.4 49 426-474 18-67 (99)
10 1ulr_A Putative acylphosphatas 71.2 2.6 8.9E-05 35.1 3.1 45 430-474 16-61 (88)
11 2fhm_A Probable acylphosphatas 70.8 2.6 9E-05 35.3 3.0 46 430-475 16-62 (91)
12 2gv1_A Probable acylphosphatas 70.4 2.5 8.5E-05 35.5 2.8 47 427-473 15-62 (92)
13 1urr_A CG18505 protein; acylph 69.3 2.6 8.8E-05 36.1 2.7 49 426-474 21-70 (102)
14 3trg_A Acylphosphatase; fatty 68.8 2.7 9.2E-05 35.9 2.7 49 426-474 22-71 (98)
15 1w2i_A Acylphosphatase; hydrol 68.3 2.5 8.7E-05 35.5 2.4 45 429-473 17-62 (91)
16 2bjd_A Acylphosphatase; hypert 67.3 3.1 0.00011 35.7 2.7 49 425-473 23-72 (101)
17 3zs9_C Golgi to ER traffic pro 55.1 8.8 0.0003 28.0 2.8 20 313-332 3-22 (38)
18 1f32_A Major pepsin inhibitor 54.8 8.9 0.0003 35.3 3.5 37 313-349 95-144 (149)
19 3itf_A Periplasmic adaptor pro 52.7 69 0.0024 29.2 9.2 80 308-400 40-125 (145)
20 1gxu_A Hydrogenase maturation 47.4 7.9 0.00027 32.5 1.9 37 426-463 17-54 (91)
21 3sjd_D Golgi to ER traffic pro 44.0 19 0.00064 27.2 3.2 24 310-333 10-33 (46)
22 3o39_A Periplasmic protein rel 40.9 86 0.0029 27.2 7.5 78 308-401 12-98 (108)
23 2kxh_B Peptide of FAR upstream 28.5 46 0.0016 23.3 2.9 20 60-79 6-25 (31)
24 3oeo_A Spheroplast protein Y; 26.5 61 0.0021 29.0 4.3 81 308-400 28-113 (138)
25 2ksw_A Oryctin; kazal-type, pr 24.3 60 0.002 25.4 3.2 28 443-471 15-42 (66)
26 3plv_C 66 kDa U4/U6.U5 small n 23.9 36 0.0012 21.8 1.6 12 336-347 10-21 (21)
27 4f67_A UPF0176 protein LPG2838 21.4 68 0.0023 31.7 3.9 59 416-475 16-76 (265)
28 3vth_A Hydrogenase maturation 20.2 47 0.0016 37.8 2.7 47 427-474 21-68 (761)
No 1
>1yrx_A Hypothetical protein RSPH03001874; ferredoxin-like fold, flavin binding, photoreceptor, transcr; HET: FMN D9G; 2.30A {Rhodobacter sphaeroides 2} SCOP: d.58.10.2 PDB: 2bun_A*
Probab=96.93 E-value=0.0018 Score=58.14 Aligned_cols=85 Identities=16% Similarity=0.307 Sum_probs=68.3
Q ss_pred ccccccccceeEEEecCCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 008858 436 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 515 (551)
Q Consensus 436 ~~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F~ 515 (551)
..|-.+.++||+-+++.+.-+=|.||.+.++.. +..||.= |..-..|..+-.|.+.+|.|.
T Consensus 30 r~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~----Ly~rI~~---------------D~RH~~v~~l~~~~i~~R~F~ 90 (121)
T 1yrx_A 30 QAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE----VMTHIQR---------------DRRHSNVEILAEEPIAKRRFA 90 (121)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH----HHHHHHT---------------CTTEEEEEEEEEEEESSCSCS
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEecCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEeeeccccccC
Confidence 456678999999999999999999999999986 3467762 233457899999999999999
Q ss_pred CeeEEecCCHHHHHHHHHhcCchhHHHHHhcccCCC
Q 008858 516 RFFVHECMTEAAAKKVFADAGVAHYWDLAVNFNDEI 551 (551)
Q Consensus 516 ~w~~k~c~te~~Are~L~~~~~ehyWdlA~~~~~~~ 551 (551)
+|.|..+..+. ..|.++.+++.+|
T Consensus 91 ~WsM~~~~~~~------------~~~~l~~~~~~~~ 114 (121)
T 1yrx_A 91 GWHMQLSCSEA------------DMRSLGLAESRQI 114 (121)
T ss_dssp SEEEEECCCHH------------HHHHTTCCCCCCC
T ss_pred CCcccccchHH------------HHHhhcccchhhh
Confidence 99999998774 5566666666655
No 2
>2iyg_A APPA, antirepressor of PPSR, sensor of blue light; signal transduction; HET: FMN; 2.3A {Rhodobacter sphaeroides} PDB: 2iyi_A*
Probab=96.14 E-value=0.0073 Score=54.38 Aligned_cols=79 Identities=15% Similarity=0.288 Sum_probs=65.1
Q ss_pred cccccccccceeEEEecCCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCC
Q 008858 435 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF 514 (551)
Q Consensus 435 V~~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F 514 (551)
-..|-.+.++||+-+++.+.-+=|.||.+.++.. +..||.= |..-..|..+-.|.+.+|.|
T Consensus 41 ar~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~----Ly~rI~~---------------D~RH~~v~~L~~~~i~~R~F 101 (124)
T 2iyg_A 41 SQAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE----VMTHIQR---------------DRRHSNVEILAEEPIAKRRF 101 (124)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH----HHHHHHH---------------CTTEEEEEEEEEEECSSCSS
T ss_pred HHHhhhhcCCEEEEEEcCCEEEEEeeCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEeeecccCcc
Confidence 3456678999999999999999999999999986 3467762 23345789999999999999
Q ss_pred CCeeEEecCCHHHHHHHH
Q 008858 515 NRFFVHECMTEAAAKKVF 532 (551)
Q Consensus 515 ~~w~~k~c~te~~Are~L 532 (551)
.+|.|..+..+...+.+.
T Consensus 102 ~~WsM~~~~~~~~~~~l~ 119 (124)
T 2iyg_A 102 AGWHMQLSCSEADMRSLG 119 (124)
T ss_dssp TTCSSEEECCHHHHHHHH
T ss_pred CCCcccccchhHHHHHHh
Confidence 999999999887776654
No 3
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=95.67 E-value=0.014 Score=53.98 Aligned_cols=84 Identities=15% Similarity=0.164 Sum_probs=67.3
Q ss_pred cccccccccceeEEEecCCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCC
Q 008858 435 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF 514 (551)
Q Consensus 435 V~~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F 514 (551)
-..|-.+.++||+-+++.+.-+=|.||.+.++.. +..||.= |..-..|..+-.|.+.+|.|
T Consensus 31 a~~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~----l~~rI~~---------------D~RH~~v~~l~~~~i~~R~F 91 (153)
T 2hfn_A 31 SQRNNPANGITGLLCYSKPAFLQVLEGECEQVNE----TYHRIVQ---------------DERHHSPQIIECMPIRRRNF 91 (153)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH----HHHHHHT---------------CTTEEEEEEEEEEECSSCSS
T ss_pred HHHhhhhcCcEEEEEEeCCEEEEEeeCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEecccCCCcc
Confidence 3456678999999999999999999999999986 3467762 23345799999999999999
Q ss_pred CCeeEEecCCH----HHHHHHHHhcCc
Q 008858 515 NRFFVHECMTE----AAAKKVFADAGV 537 (551)
Q Consensus 515 ~~w~~k~c~te----~~Are~L~~~~~ 537 (551)
.+|.|....-+ ......|.+++.
T Consensus 92 ~~W~M~~~~~~~~~~~~~~~~~~~~~~ 118 (153)
T 2hfn_A 92 EVWSMQAITVNDLSTEQVKTLVLKYSG 118 (153)
T ss_dssp TTCSCEEEECSTTSCHHHHHHHHHTSS
T ss_pred CCCcCeeecccccchhHHHHHHHhccc
Confidence 99999987766 666677766543
No 4
>1x0p_A Hypothetical protein TLL0078; BLUF, FAD, structural genomics, electron transport; HET: FAD; 2.00A {Thermosynechococcus elongatus} SCOP: d.58.10.2
Probab=95.64 E-value=0.0077 Score=55.21 Aligned_cols=83 Identities=14% Similarity=0.182 Sum_probs=66.0
Q ss_pred ccccccccceeEEEecCCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 008858 436 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 515 (551)
Q Consensus 436 ~~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F~ 515 (551)
..|-.+.++||+-+++.+.-+=|.||.+.++.. +..||.= |..-..|..+-.|.+.+|.|.
T Consensus 29 ~~~N~~~~ITG~Ll~~~g~F~Q~LEG~~~~V~~----l~~rI~~---------------D~RH~~v~~l~~~~i~~R~F~ 89 (143)
T 1x0p_A 29 EVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSE----TYARILK---------------DPRHHSAEIVEFKAIEERTFI 89 (143)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH----HHHHHHT---------------CTTEEEEEEEEEEECSSCSSC
T ss_pred HHhhhhcCCEEEEEEcCCEEEEEecCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEeeeccccccC
Confidence 456678999999999999999999999999986 3467762 233456889999999999999
Q ss_pred CeeEEecCCHH----HHHHHHHhcCc
Q 008858 516 RFFVHECMTEA----AAKKVFADAGV 537 (551)
Q Consensus 516 ~w~~k~c~te~----~Are~L~~~~~ 537 (551)
+|.|....-+. ....+|.+++.
T Consensus 90 ~W~M~~~~~~~~~~~~~~~~~~~~~~ 115 (143)
T 1x0p_A 90 NWSMRLVQLGEMDSDTIRRLRLKYSP 115 (143)
T ss_dssp SCSCCEEEGGGSCHHHHHHHHHHTCS
T ss_pred CCcceeecccccchHHHHHHHHhccc
Confidence 99998766555 66667766544
No 5
>2byc_A Blue-light receptor of the BLUF-family; signaling protein, photoreceptor, flavin; HET: FMN; 1.9A {Rhodobacter sphaeroides} SCOP: d.58.10.2
Probab=94.96 E-value=0.026 Score=51.56 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=59.8
Q ss_pred ccccccccceeEEEecCCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 008858 436 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 515 (551)
Q Consensus 436 ~~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F~ 515 (551)
..|-.+.++||+-+++.+.-+=|.||.+.++.. +..||.= |..-..|..+-.|.+..|.|.
T Consensus 31 r~~N~~~gITG~Ll~~~g~F~QvLEG~~~~V~~----L~~rI~~---------------D~RH~~v~~L~~~~i~~R~F~ 91 (137)
T 2byc_A 31 RVRNLRLGITGILLYNGVHFVQTIEGPRSACDE----LFRLISA---------------DPRHQEILAFDLEPITARRFP 91 (137)
T ss_dssp HHHHHHHTCEEEEEECSSEEEEEEEEEHHHHHH----HHHHHHT---------------CTTEEEEEEEEEEECSSCSST
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEeeCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEecccCCCcCC
Confidence 456678999999999999999999999999986 3467762 233457999999999999999
Q ss_pred CeeEEecCCHH
Q 008858 516 RFFVHECMTEA 526 (551)
Q Consensus 516 ~w~~k~c~te~ 526 (551)
+|.|....-+.
T Consensus 92 ~W~M~~~~~~~ 102 (137)
T 2byc_A 92 DWSMRIVSRKE 102 (137)
T ss_dssp TCSCEEECHHH
T ss_pred CCcCccccccc
Confidence 99999877654
No 6
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=92.10 E-value=0.21 Score=52.15 Aligned_cols=85 Identities=14% Similarity=0.085 Sum_probs=62.4
Q ss_pred cccccccceeEEEecCCceEEEEecchhHHHHHhhhhhhccCcCccccccCcCccccCCCCCCeeEEEEeeecCCCCCCC
Q 008858 437 VNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFNR 516 (551)
Q Consensus 437 ~NAqQl~LtG~~l~~~~~~lVVVEGg~KsikkYkkLMl~RIkW~e~~~~~~~~~~~~~d~~~N~C~LVWEG~vk~r~F~~ 516 (551)
.|-.+.++||+-+++.+.-+=|.||.+.++.. +..||.= |..-..|..+-.|.+..|.|.+
T Consensus 37 ~~N~~~~itG~L~~~~~~F~Q~lEG~~~~v~~----l~~~I~~---------------D~RH~~v~~l~~~~~~~r~F~~ 97 (413)
T 3gfz_A 37 SKNLPLGITGILLFNGLQFFQVLEGTEEALES----LFSEIQS---------------DPRHRDVVELMRDYSAYRRFHG 97 (413)
T ss_dssp HHHGGGTCEEEEEECSSEEEEEEEEEHHHHHH----HHHHHHT---------------CTTCEEEEEEEEEECSSCSSTT
T ss_pred HhccccCcEEEEEEeCCEEEEEEeCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEEeecCcccCCC
Confidence 56678999999999999999999999999986 3467762 3334578999999999999999
Q ss_pred eeEEec-----CCHHHHHHHHHhcCchhHH
Q 008858 517 FFVHEC-----MTEAAAKKVFADAGVAHYW 541 (551)
Q Consensus 517 w~~k~c-----~te~~Are~L~~~~~ehyW 541 (551)
|.|... .++.....+| +++-.+|+
T Consensus 98 w~M~~~~l~~~~~~~~~~~i~-~~~~~~~~ 126 (413)
T 3gfz_A 98 TGMRILDLRLFETDGALEEIL-RFSTFGVT 126 (413)
T ss_dssp CSCCEEEGGGSCTTHHHHHHH-HHCC----
T ss_pred cchhhccccccChHHHHHHHH-hhCCcccc
Confidence 999875 2333333444 55555554
No 7
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=78.10 E-value=2.6 Score=37.64 Aligned_cols=61 Identities=18% Similarity=0.194 Sum_probs=49.5
Q ss_pred CCceEEEEEEEcCCCC-CccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhh
Q 008858 413 SVETIVSVYKINDLSH-PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 413 ~~~v~~aVyrI~~Lsn-p~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLM 473 (551)
+..+....|+|.=..- =--|+-+..-|++|+|+|.|. +.++-=.|++||.+.++..|..++
T Consensus 30 ~~di~t~~frV~G~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~v~~f~~~l 92 (121)
T 2lxf_A 30 SEDVTTLCYRVTGKVQGVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPKEQVDAFVKYL 92 (121)
T ss_dssp STTEEEEEEEEEECTTCCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred ccCEEEEEEEEEEeeCCcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHH
Confidence 3567788899986544 468999999999999999886 556655789999999999997765
No 8
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=77.48 E-value=5.1 Score=33.97 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=40.0
Q ss_pred EEEEc-CCCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhh
Q 008858 420 VYKIN-DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 420 VyrI~-~Lsnp~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLM 473 (551)
-+.|. ...-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 10 ~i~V~G~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l 65 (98)
T 1aps_A 10 DYEVFGRVQGVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEEKVNSMKSWL 65 (98)
T ss_dssp EEEEECTTSCCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHHHHHHHHHSS
T ss_pred EEEEEEEECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence 33444 3344567888999999999999875 445534789999999999985554
No 9
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=76.30 E-value=3.8 Score=34.86 Aligned_cols=49 Identities=10% Similarity=0.073 Sum_probs=38.5
Q ss_pred CCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 426 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 426 Lsnp~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 18 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~ 67 (99)
T 2vh7_A 18 VQGVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLE 67 (99)
T ss_dssp CSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHH
T ss_pred eCCcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 344456788888999999999875 5555447899999999999877664
No 10
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=71.21 E-value=2.6 Score=35.12 Aligned_cols=45 Identities=24% Similarity=0.229 Sum_probs=35.4
Q ss_pred ccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 430 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 430 ~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 61 (88)
T 1ulr_A 16 GYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK 61 (88)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence 35677778899999999885 4455347889999999999877663
No 11
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=70.83 E-value=2.6 Score=35.26 Aligned_cols=46 Identities=17% Similarity=0.322 Sum_probs=36.1
Q ss_pred ccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhhh
Q 008858 430 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 430 ~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
--|+-+..-|++|+|+|.|. ..++-=.|+++|.+.++..|...+.+
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~ 62 (91)
T 2fhm_A 16 GFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPENALQSFVEAVKN 62 (91)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHHh
Confidence 34677778899999999885 44553478999999999998777643
No 12
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=70.41 E-value=2.5 Score=35.52 Aligned_cols=47 Identities=21% Similarity=0.258 Sum_probs=37.0
Q ss_pred CCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhh
Q 008858 427 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 427 snp~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLM 473 (551)
.-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 15 QGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l 62 (92)
T 2gv1_A 15 QGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWL 62 (92)
T ss_dssp TTTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHh
Confidence 33446778888999999999885 445534688999999999987766
No 13
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=69.32 E-value=2.6 Score=36.15 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=39.0
Q ss_pred CCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 426 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 426 Lsnp~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 21 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~ 70 (102)
T 1urr_A 21 VQGVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLE 70 (102)
T ss_dssp CSSSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHH
T ss_pred ECCcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 344556888889999999999875 5556447899999999999977775
No 14
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=68.83 E-value=2.7 Score=35.92 Aligned_cols=49 Identities=24% Similarity=0.179 Sum_probs=38.4
Q ss_pred CCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 426 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 426 Lsnp~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 22 VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~l~~f~~~l~ 71 (98)
T 3trg_A 22 VQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLW 71 (98)
T ss_dssp CSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTT
T ss_pred ECCCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEECHHHHHHHHHHHH
Confidence 344556888889999999999986 4455457889999999999866653
No 15
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=68.32 E-value=2.5 Score=35.46 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=35.4
Q ss_pred CccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhh
Q 008858 429 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 429 p~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLM 473 (551)
=--|+-+..-|++|+|+|.|. ..++-=.|+++|.+.++..|...+
T Consensus 17 VGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l 62 (91)
T 1w2i_A 17 VGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWA 62 (91)
T ss_dssp SSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHHHHHHHHHH
Confidence 345777888899999999885 445544788999999999986655
No 16
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=67.32 E-value=3.1 Score=35.75 Aligned_cols=49 Identities=20% Similarity=0.178 Sum_probs=39.3
Q ss_pred CCCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhh
Q 008858 425 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 473 (551)
Q Consensus 425 ~Lsnp~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLM 473 (551)
...----|+-+..-|++|+|+|.|. ..++-=.|+++|.+.++..|...+
T Consensus 23 ~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l 72 (101)
T 2bjd_A 23 LVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERI 72 (101)
T ss_dssp ECSSSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred eECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence 3455667889999999999999885 455534789999999999987666
No 17
>3zs9_C Golgi to ER traffic protein 2; hydrolase-transport protein complex, membrane protein, targe factor; HET: ADP; 2.10A {Saccharomyces cerevisiae}
Probab=55.14 E-value=8.8 Score=28.03 Aligned_cols=20 Identities=30% Similarity=0.478 Sum_probs=16.6
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 008858 313 KLTKKEQKKLRTQRRLAREK 332 (551)
Q Consensus 313 ~LTKKEqKKlRRqrR~e~~k 332 (551)
-||..|+.+|||-||+++-+
T Consensus 3 els~~ekaRlrRERR~aKi~ 22 (38)
T 3zs9_C 3 ELTEAEKRRLLRERRQKKFS 22 (38)
T ss_dssp -CCHHHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 38899999999999987743
No 18
>1f32_A Major pepsin inhibitor PI-3; proteinase inhibitor, hydrolase inhibitor; 1.75A {Ascaris suum} SCOP: d.62.1.1 PDB: 1f34_B*
Probab=54.81 E-value=8.9 Score=35.32 Aligned_cols=37 Identities=32% Similarity=0.566 Sum_probs=21.0
Q ss_pred CCCHHHHHHHHH-HHHHHHHHHHHHHHHc------------CCCCCCCcc
Q 008858 313 KLTKKEQKKLRT-QRRLAREKDRQEMIRQ------------GLIEPPKPK 349 (551)
Q Consensus 313 ~LTKKEqKKlRR-qrR~e~~kEkQdKIRL------------GL~PPP~PK 349 (551)
-||..|+..|-. .......+|+|+.+++ ||.||++|-
T Consensus 95 dLT~~Eq~EL~~y~~k~~a~eer~e~~~~~~~~~k~~k~~~~~~pP~kPS 144 (149)
T 1f32_A 95 DLTAKDHAEVQTFREKIAAFEEQQENQPPSSGMPHGAVPAGGLSPPPPPS 144 (149)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHC--------------------CCCCCCG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCCCcccccCCCCCCCC
Confidence 389999999876 5555666666666554 677777763
No 19
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A
Probab=52.71 E-value=69 Score=29.22 Aligned_cols=80 Identities=18% Similarity=0.304 Sum_probs=41.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchh-hhhhhhhccccCCCChHHHHHHHHHHHHHHHHHH
Q 008858 308 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKM-SNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHI 386 (551)
Q Consensus 308 ~~~pl~LTKKEqKKlRRqrR~e~~kEkQdKIRLGL~PPP~PKVKL-SNLMrVLg~eAV~DPTkvE~~VR~Qm~eR~~~He 386 (551)
....|-||..-+.+||..+...+... ++ +.... .-|..++.+ .--|+.+|.+.+.+..+.+.....
T Consensus 40 m~~~L~LTdeQkqqir~L~~~~r~~~----------~~--~~~~~r~~l~~Li~a-d~fDeaa~ral~~~~~~~~~e~~v 106 (145)
T 3itf_A 40 MFDGISLTEHQRQQMRDLMQQARHEQ----------PP--VNVSELETMHRLVTA-ENFDENAVRAQAEKMANEQIARQV 106 (145)
T ss_dssp TTTTCCCCHHHHHHHHHHHHHHHHHS----------CC--CCHHHHHHHHHHHTC-SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHh----------hh--ccHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999988765444321 11 11111 223333333 344655555554444433333222
Q ss_pred HH----HHhcc-CCHHHHH
Q 008858 387 DR----NIARK-LTPAERR 400 (551)
Q Consensus 387 ~~----N~~RK-LT~EqR~ 400 (551)
.+ |.--. ||||||.
T Consensus 107 ~r~k~~~qiy~vLTPEQk~ 125 (145)
T 3itf_A 107 EMAKVRNQMYRLLTPEQQA 125 (145)
T ss_dssp HHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHH
Confidence 22 33333 9999974
No 20
>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A
Probab=47.41 E-value=7.9 Score=32.50 Aligned_cols=37 Identities=19% Similarity=-0.004 Sum_probs=29.0
Q ss_pred CCCCccccccccccccccceeEEE-ecCCceEEEEecch
Q 008858 426 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGS 463 (551)
Q Consensus 426 Lsnp~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~ 463 (551)
..-=--|+-+...|++|+|+|.|. ..++ =.|++||.+
T Consensus 17 VQGVGFR~~v~~~A~~lgL~G~VrN~~dG-Vei~~eG~~ 54 (91)
T 1gxu_A 17 VQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP 54 (91)
T ss_dssp CSSSSHHHHHHHHHHHHTCCEEEEECSSS-EEEEESSCC
T ss_pred eCCcCHHHHHHHHHHHcCCeEEEEECCCc-EEEEEEECH
Confidence 344556788889999999999875 5567 567889988
No 21
>3sjd_D Golgi to ER traffic protein 2; ATPase, receptor complex, TA-protein biogenesis, GET pathway hydrolase-transport protein complex; HET: ADP; 4.60A {Saccharomyces cerevisiae}
Probab=44.00 E-value=19 Score=27.23 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=16.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 008858 310 QPLKLTKKEQKKLRTQRRLAREKD 333 (551)
Q Consensus 310 ~pl~LTKKEqKKlRRqrR~e~~kE 333 (551)
..--|+..|+.+|||.||+++-+.
T Consensus 10 ~~~~lsa~EkaRLrRERR~aKi~~ 33 (46)
T 3sjd_D 10 MGSELTEAEKRRLLRERRQKKFSN 33 (46)
T ss_dssp -----CHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHc
Confidence 445688999999999999987554
No 22
>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}
Probab=40.91 E-value=86 Score=27.24 Aligned_cols=78 Identities=19% Similarity=0.349 Sum_probs=45.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 008858 308 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 387 (551)
Q Consensus 308 ~~~pl~LTKKEqKKlRRqrR~e~~kEkQdKIRLGL~PPP~PKVKLSNLMrVLg~eAV~DPTkvE~~VR~Qm~eR~~~He~ 387 (551)
....|-||-.-+-+||..+...+..- +.| ..--...|..++.++.. | |+.||.+++++...+.+
T Consensus 12 ~~~~L~LTd~Qk~qir~L~~~~r~~~----------~~~-~~~~r~~m~~Li~ad~F-D----Eaaar~l~~~~~~~~~e 75 (108)
T 3o39_A 12 SFKDLNLTDAQKQQIREIMKGQRDQM----------KRP-PLEERRAMHDIIASDTF-D----KAKAEAQIAKMEEQRKA 75 (108)
T ss_dssp -CCCSCCCHHHHHHHHHHHHTTTTSC----------CCC-CHHHHHHHHHHHSSSSC-C----HHHHHHHHHHTHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHhc----------ccc-cHHHHHHHHHHhccCCC-C----HHHHHHHHHHHHHHHHH
Confidence 35789999888888887666554421 111 11112234444444433 4 66677777766666665
Q ss_pred HHHhc---------cCCHHHHHH
Q 008858 388 RNIAR---------KLTPAERRE 401 (551)
Q Consensus 388 ~N~~R---------KLT~EqR~e 401 (551)
+=.+| =||||||..
T Consensus 76 ~~v~~~r~~~qmy~lLTPEQk~q 98 (108)
T 3o39_A 76 NMLAHMETQNKIYNILTPEQKKQ 98 (108)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHH
Confidence 54444 499999743
No 23
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=28.49 E-value=46 Score=23.25 Aligned_cols=20 Identities=40% Similarity=0.569 Sum_probs=15.7
Q ss_pred cccccHHHHHHHHHHHHHhc
Q 008858 60 ANITNIEAVKRAQELAAKMG 79 (551)
Q Consensus 60 ~~~~~~~~~~~a~~~a~~~~ 79 (551)
.+-.=.++..||+.+|+|++
T Consensus 6 ~~daFadA~~RaRQIaAKig 25 (31)
T 2kxh_B 6 VNDAFKDALQRARQIAAKIG 25 (31)
T ss_dssp CSSHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHhc
Confidence 33344688999999999987
No 24
>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}
Probab=26.47 E-value=61 Score=29.02 Aligned_cols=81 Identities=20% Similarity=0.347 Sum_probs=43.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHH-
Q 008858 308 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHI- 386 (551)
Q Consensus 308 ~~~pl~LTKKEqKKlRRqrR~e~~kEkQdKIRLGL~PPP~PKVKLSNLMrVLg~eAV~DPTkvE~~VR~Qm~eR~~~He- 386 (551)
....|-||..-+.+||..+...+..-. .+-...+ .-|..++.++ --|+.+|++.+.+..+.+.....
T Consensus 28 m~~~L~LT~eQ~~qir~i~~~~r~~~~----------~~~~~~r-~~l~~Li~a~-~fDeaav~al~~~~~~~~~e~~~~ 95 (138)
T 3oeo_A 28 MFKDLNLTDAQKQQIREIMKGQRDQMK----------RPPLEER-RAMHDIITSD-TFDKVKAEAQIAKMEEQRKANMLA 95 (138)
T ss_dssp --CCSCCCTTHHHHHHHHHHHHSSSSC----------CCCTTHH-HHHHHHHTCS-SCCHHHHHHHHGGGSHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHH----------HHHHHHH-HHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457799999999999976544432111 1111111 3344444443 34777766666554433322222
Q ss_pred ---HHHHhcc-CCHHHHH
Q 008858 387 ---DRNIARK-LTPAERR 400 (551)
Q Consensus 387 ---~~N~~RK-LT~EqR~ 400 (551)
-.|.-+. ||||||.
T Consensus 96 ~~~~~~~~~~vLTPEQr~ 113 (138)
T 3oeo_A 96 HMETQNKIYNILTPEQKK 113 (138)
T ss_dssp HHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHhCCHHHHH
Confidence 2355555 9999974
No 25
>2ksw_A Oryctin; kazal-type, protease inhibitor, hydrolase inhibitor; NMR {Oryctes rhinoceros}
Probab=24.27 E-value=60 Score=25.42 Aligned_cols=28 Identities=25% Similarity=0.442 Sum_probs=22.0
Q ss_pred cceeEEEecCCceEEEEecchhHHHHHhh
Q 008858 443 RLTGCAVICEGINVVVVEGGSKSIKRYGK 471 (551)
Q Consensus 443 ~LtG~~l~~~~~~lVVVEGg~KsikkYkk 471 (551)
.|.--|.+++.-+||||-||- +..+|+-
T Consensus 15 dlvphcflnpekgivvvhggc-alskykc 42 (66)
T 2ksw_A 15 DLVPHCFLNPEKGIVVVHGGC-ALSKYKC 42 (66)
T ss_dssp CSCCEEEECTTSCEEEECSHH-HHHHHHH
T ss_pred cccchhhcccccCEEEEecce-eeeeccc
Confidence 456678899999999999985 6667763
No 26
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=23.89 E-value=36 Score=21.85 Aligned_cols=12 Identities=25% Similarity=0.086 Sum_probs=9.2
Q ss_pred HHHHcCCCCCCC.....
Q 008858 336 EMIRQGLIEPPK..... 347 (551)
Q Consensus 336 dKIRLGL~PPP~..... 347 (551)
-++.|||-|.||
T Consensus 10 ~r~~lGLkplp~..... 21 (21)
T 3plv_C 10 LRASLGLKLIPPxxxxx 26 (26)
T ss_dssp HHHHTTCCCCCC.....
T ss_pred HHHHcCCCCCCC.....
Confidence 456799988886
No 27
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=21.44 E-value=68 Score=31.74 Aligned_cols=59 Identities=20% Similarity=0.303 Sum_probs=47.6
Q ss_pred eEEEEEEEcCCCCC-ccccccccccccccceeEEEecC-CceEEEEecchhHHHHHhhhhhh
Q 008858 416 TIVSVYKINDLSHP-KTRFKVDVNAHENRLTGCAVICE-GINVVVVEGGSKSIKRYGKLMLR 475 (551)
Q Consensus 416 v~~aVyrI~~Lsnp-~~rFKV~~NAqQl~LtG~~l~~~-~~~lVVVEGg~KsikkYkkLMl~ 475 (551)
+.++.|++-.|.|| ..|-.+....+.++|+|.+++.+ |+|.-| -|...++..|-..|..
T Consensus 16 ~~~~~Y~f~~~~d~~~~~~~~~~~~~~~~~~G~i~~a~eGiN~t~-~g~~~~~~~~~~~l~~ 76 (265)
T 4f67_A 16 IIASFYKFIPLNDFRSLREPILTKMHEIGIKGTIILAHEGVNGGF-AGNREQMNVFYDYLRS 76 (265)
T ss_dssp EEEEEEEECCCTTHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEE-EECHHHHHHHHHHHTT
T ss_pred EEEEEeCeecCCCHHHHHHHHHHHHHHCCCeEEEEEcCccceEEE-EeCHHHHHHHHHHHHh
Confidence 46899999999997 45666777889999999998875 888754 5778889998876643
No 28
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=20.21 E-value=47 Score=37.82 Aligned_cols=47 Identities=23% Similarity=0.150 Sum_probs=38.1
Q ss_pred CCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHhhhhh
Q 008858 427 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 474 (551)
Q Consensus 427 snp~~rFKV~~NAqQl~LtG~~l-~~~~~~lVVVEGg~KsikkYkkLMl 474 (551)
.-=--|+-|..-|++++|+|.|. ..++ =.|+|||.+.++..|...+.
T Consensus 21 QGVGFR~~v~~~A~~lgL~G~V~N~~dG-Vei~~eG~~~~l~~f~~~L~ 68 (761)
T 3vth_A 21 QGVGFRPFVFNIAQKYNLKGIVYNNSSG-LYIEVEGEEKDIEAFIREIK 68 (761)
T ss_dssp SSSSHHHHHHHHHHHTTCEEEEEEETTE-EEEEEEECHHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHcCCeEEEEECCCe-EEEEEEECHHHHHHHHHHHh
Confidence 33456788888999999999985 5556 57899999999999877775
Done!