Query 008859
Match_columns 551
No_of_seqs 391 out of 2883
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 13:23:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fk9_A Protein kinase C, ETA t 99.9 2E-22 7E-27 187.6 12.9 131 9-180 21-156 (157)
2 1gmi_A Protein kinase C, epsil 99.8 1.7E-20 5.9E-25 169.4 14.0 130 13-182 2-134 (136)
3 2ep6_A MCTP2 protein; beta san 99.8 4.7E-20 1.6E-24 165.7 13.8 129 7-181 3-132 (133)
4 2dmh_A Myoferlin; beta-sandwic 99.8 8.8E-20 3E-24 165.0 15.7 124 15-184 5-136 (140)
5 3b7y_A E3 ubiquitin-protein li 99.8 1E-19 3.5E-24 167.2 15.7 124 15-181 18-153 (153)
6 1wfj_A Putative elicitor-respo 99.8 3.6E-20 1.2E-24 166.7 12.3 124 15-185 8-134 (136)
7 1v0w_A Phospholipase D; hydrol 99.8 5.4E-21 1.8E-25 209.2 6.9 159 241-461 65-225 (506)
8 3kwu_A MUNC13-1; calcium bindi 99.8 8.4E-19 2.9E-23 160.2 18.5 121 14-180 14-146 (148)
9 3m7f_B E3 ubiquitin-protein li 99.8 7.2E-19 2.5E-23 165.7 16.2 124 16-182 7-142 (176)
10 1rlw_A Phospholipase A2, CALB 99.8 5E-19 1.7E-23 157.0 13.8 118 16-181 2-125 (126)
11 3pyc_A E3 ubiquitin-protein li 99.8 3.6E-18 1.2E-22 153.1 15.8 120 17-179 5-131 (132)
12 2nq3_A Itchy homolog E3 ubiqui 99.8 2.5E-18 8.6E-23 162.3 13.7 126 14-184 33-164 (173)
13 2b3r_A Phosphatidylinositol-4- 99.7 3.5E-17 1.2E-21 147.6 14.1 109 10-161 13-130 (134)
14 2r83_A Synaptotagmin-1; C2A-C2 99.7 9.6E-17 3.3E-21 161.8 17.5 126 16-183 18-149 (284)
15 1rsy_A Synaptotagmin I; calciu 99.7 3.3E-17 1.1E-21 150.6 12.8 104 16-161 41-150 (152)
16 3f04_A Synaptotagmin-1; C2A, c 99.7 3.3E-17 1.1E-21 148.6 11.9 103 16-160 33-141 (143)
17 1a25_A CALB, protein kinase C 99.7 5.1E-17 1.7E-21 148.7 13.0 106 14-162 28-140 (149)
18 3rdl_A Protein kinase C alpha 99.7 6.7E-17 2.3E-21 145.1 12.8 106 14-162 13-125 (137)
19 3fdw_A Synaptotagmin-like prot 99.7 3.9E-17 1.3E-21 149.3 11.0 108 16-165 22-138 (148)
20 1rh8_A Piccolo protein; beta-s 99.7 2.2E-17 7.7E-22 149.4 9.2 108 13-162 14-139 (142)
21 2d8k_A Synaptotagmin VII; exoc 99.7 9.2E-17 3.1E-21 145.5 13.2 105 16-162 25-136 (141)
22 2q3x_A Regulating synaptic mem 99.7 5.5E-17 1.9E-21 152.4 11.8 107 14-162 27-140 (171)
23 2bwq_A Regulating synaptic mem 99.7 9.1E-17 3.1E-21 142.9 12.2 101 16-159 17-128 (129)
24 1v27_A Regulating synaptic mem 99.7 5.7E-17 2E-21 146.3 10.6 107 16-165 20-137 (141)
25 2dmg_A KIAA1228 protein; beta- 99.7 2E-16 6.9E-21 143.3 13.0 105 16-163 23-137 (142)
26 2z0u_A WW domain-containing pr 99.7 4.3E-17 1.5E-21 151.1 8.6 103 16-160 42-154 (155)
27 3fbk_A RGS3, RGP3, regulator o 99.7 2.9E-16 1E-20 144.5 13.1 105 16-163 26-139 (153)
28 3n5a_A Synaptotagmin-7; calciu 99.7 5.7E-17 1.9E-21 145.6 7.4 108 16-167 15-130 (138)
29 1wfm_A Synaptotagmin XIII; C2 99.7 3.5E-16 1.2E-20 141.6 12.3 83 80-162 44-133 (138)
30 2chd_A Rabphilin-3A, exophilin 99.7 3E-16 1E-20 142.2 11.8 103 16-160 28-139 (142)
31 1w15_A Synaptotagmin IV; metal 99.7 5.7E-17 1.9E-21 148.9 7.0 107 16-166 29-143 (153)
32 4ggj_A Mitochondrial cardiolip 99.7 2.4E-16 8.4E-21 151.6 11.2 135 241-461 45-179 (196)
33 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.1E-15 3.7E-20 137.9 14.8 104 16-161 21-133 (138)
34 2cm5_A Rabphilin-3A; protein t 99.7 7.2E-16 2.5E-20 143.7 13.5 106 16-165 36-149 (166)
35 1tjx_A Similar to synaptotagmi 99.7 6.8E-16 2.3E-20 142.7 13.1 104 16-161 24-147 (159)
36 2enp_A B/K protein; C2 type 1, 99.6 3.6E-16 1.2E-20 142.6 9.2 109 16-160 25-140 (147)
37 1dqv_A Synaptotagmin III; beta 99.6 6.9E-15 2.4E-19 149.7 16.0 124 16-182 19-150 (296)
38 1byr_A Protein (endonuclease); 99.6 1.1E-14 3.8E-19 133.5 13.8 136 241-461 13-150 (155)
39 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.3E-14 4.5E-19 130.5 13.2 96 80-179 23-130 (131)
40 3l9b_A Otoferlin; C2-domain, b 99.6 1.6E-14 5.5E-19 130.8 12.3 101 80-183 37-142 (144)
41 1djx_A PLC-D1, phosphoinositid 99.5 2.7E-14 9.2E-19 159.6 14.7 122 15-180 495-623 (624)
42 3jzy_A Intersectin 2; C2 domai 99.5 4.1E-14 1.4E-18 154.1 15.6 115 16-179 386-506 (510)
43 3bxj_A RAS GTPase-activating p 99.5 7.8E-16 2.7E-20 167.4 0.9 127 13-186 7-162 (483)
44 4gel_A Mitochondrial cardiolip 99.5 1.2E-14 4.2E-19 141.3 8.6 151 241-461 57-211 (220)
45 3hsi_A Phosphatidylserine synt 99.5 8E-15 2.7E-19 158.3 7.3 165 209-457 24-197 (458)
46 3nsj_A Perforin-1; pore formin 99.5 1.1E-13 3.8E-18 151.9 14.6 106 17-179 394-502 (540)
47 2cjs_A UNC-13 homolog A, MUNC1 99.5 1.3E-13 4.6E-18 129.2 11.9 66 80-149 32-99 (167)
48 2r83_A Synaptotagmin-1; C2A-C2 99.5 2.2E-13 7.4E-18 137.1 12.7 104 16-161 149-272 (284)
49 1cjy_A CPLA2, protein (cytosol 99.4 2.7E-13 9.2E-18 153.4 11.8 102 16-159 17-124 (749)
50 1dqv_A Synaptotagmin III; beta 99.4 4.1E-14 1.4E-18 143.9 4.1 111 17-170 152-270 (296)
51 1xdp_A Polyphosphate kinase; P 99.2 3.4E-11 1.2E-15 135.2 12.9 145 241-461 346-496 (687)
52 3pfq_A PKC-B, PKC-beta, protei 99.2 5.5E-11 1.9E-15 134.3 12.1 107 14-163 169-282 (674)
53 2zkm_X 1-phosphatidylinositol- 99.2 7.6E-11 2.6E-15 135.0 12.1 113 15-180 676-798 (799)
54 3qr0_A Phospholipase C-beta (P 99.1 1.2E-10 4.2E-15 133.0 12.4 113 16-181 649-771 (816)
55 3ohm_B 1-phosphatidylinositol- 99.1 9.1E-11 3.1E-15 134.8 11.0 95 80-181 742-845 (885)
56 2enj_A NPKC-theta, protein kin 99.0 1.8E-09 6E-14 96.5 12.7 91 80-182 32-131 (138)
57 1yrk_A NPKC-delta, protein kin 99.0 6.6E-09 2.3E-13 91.6 13.7 89 80-180 27-124 (126)
58 2o8r_A Polyphosphate kinase; s 98.9 1E-08 3.4E-13 114.9 14.5 142 241-458 351-500 (705)
59 3hsi_A Phosphatidylserine synt 98.7 6E-08 2.1E-12 104.6 11.7 149 241-461 257-421 (458)
60 1v0w_A Phospholipase D; hydrol 98.4 1.3E-06 4.5E-11 95.1 13.7 161 242-460 314-492 (506)
61 2o8r_A Polyphosphate kinase; s 97.1 0.0011 3.8E-08 74.3 9.8 139 232-461 509-655 (705)
62 1xdp_A Polyphosphate kinase; P 96.8 0.0039 1.3E-07 70.1 10.4 131 244-461 514-649 (687)
63 2f5t_X Archaeal transcriptiona 93.3 0.092 3.1E-06 51.2 5.6 51 241-308 9-59 (233)
64 3qph_A TRMB, A global transcri 92.2 0.29 1E-05 50.3 7.9 48 241-305 118-165 (342)
65 3l4c_A Dedicator of cytokinesi 88.3 4.3 0.00015 38.9 11.8 39 92-130 77-118 (220)
66 2yrb_A Protein fantom; beta sa 83.5 5 0.00017 36.5 9.0 98 82-181 44-150 (156)
67 2wxf_A Phosphatidylinositol-4, 74.6 14 0.00049 42.8 11.3 68 80-147 235-324 (940)
68 3hhm_A Phosphatidylinositol-4, 65.2 26 0.0009 41.2 10.8 76 80-156 375-469 (1091)
69 1e7u_A Phosphatidylinositol 3- 57.2 46 0.0016 38.7 10.9 68 80-147 238-330 (961)
70 2y3a_A Phosphatidylinositol-4, 39.7 28 0.00097 41.0 5.6 50 80-129 371-429 (1092)
71 1jx7_A Hypothetical protein YC 27.0 84 0.0029 25.6 5.1 67 234-305 9-79 (117)
72 2cs4_A Protein C12ORF2; GTP bi 23.8 1.2E+02 0.004 25.1 5.1 75 210-305 6-84 (95)
73 2qzq_A Axin interactor, dorsal 23.5 2E+02 0.007 25.7 7.1 70 80-151 32-117 (152)
74 2l82_A Designed protein OR32; 22.3 99 0.0034 26.1 4.5 45 285-343 90-134 (162)
75 2d1p_A TUSD, hypothetical UPF0 20.0 1.7E+02 0.0057 25.5 5.8 78 225-305 11-91 (140)
No 1
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.88 E-value=2e-22 Score=187.57 Aligned_cols=131 Identities=21% Similarity=0.364 Sum_probs=108.0
Q ss_pred CceeEEEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEE
Q 008859 9 KEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVV 88 (551)
Q Consensus 9 ~~~~~~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l 88 (551)
+..++.++|.|.|+|++|++|+++|..++.+ +|.+ ...++||||+|.+
T Consensus 21 ~~~~~~~~g~L~V~VieA~~L~~~D~~~~~~--~f~~------------------------------~~g~sDPYv~v~l 68 (157)
T 2fk9_A 21 SSGTMKFNGYLRVRIGEAVGLQPTRWSLRHS--LFKK------------------------------GHQLLDPYLTVSV 68 (157)
T ss_dssp ---CCCEEEEEEEEEEEEECCCCCHHHHHTT--TSSS------------------------------SCCCCCEEEEEEE
T ss_pred cchhccCccEEEEEEEEEECCCCcccccccc--cccc------------------------------CCCCCCeEEEEEE
Confidence 3456689999999999999999988543311 2221 0123899999999
Q ss_pred CCeeeEEeeecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeeccccccc----ceeeeEEEccCCC
Q 008859 89 PQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATG----ELISRWYDIIAPS 163 (551)
Q Consensus 89 ~~~~v~rTrvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g----~~i~~w~~Ll~~~ 163 (551)
++++++||++++++.||+|||+|.|.+.. ...|+|+|||.|.++ +++||.+.||++++..+ +..+.||+|.
T Consensus 69 ~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~--- 144 (157)
T 2fk9_A 69 DQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE--- 144 (157)
T ss_dssp TTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB---
T ss_pred CCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC---
Confidence 99988999999999999999999999864 568999999999999 89999999999999866 7789999992
Q ss_pred CCCCCCCceEEEEeeee
Q 008859 164 GSPPKPGASIQLELKFT 180 (551)
Q Consensus 164 gkp~k~~G~L~lsl~f~ 180 (551)
..|+|+|+++|.
T Consensus 145 -----~~G~i~l~l~~~ 156 (157)
T 2fk9_A 145 -----PEGKVFVVITLT 156 (157)
T ss_dssp -----SSCEEEEEEEEC
T ss_pred -----CCcEEEEEEEEE
Confidence 269999999884
No 2
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=1.7e-20 Score=169.42 Aligned_cols=130 Identities=18% Similarity=0.392 Sum_probs=106.5
Q ss_pred EEEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCee
Q 008859 13 IYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQAT 92 (551)
Q Consensus 13 ~~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~~ 92 (551)
..++|.|.|+|++|++|+++|.++++. +.+ + .+...+||||+|.+++..
T Consensus 2 ~~~~g~L~v~v~~a~~L~~~d~~~~~~---~g~--------------------~--------~~~~~~DPyv~v~l~~~~ 50 (136)
T 1gmi_A 2 VVFNGLLKIKICEAVSLKPTAWSLRDA---VGP--------------------R--------PQTFLLDPYIALNVDDSR 50 (136)
T ss_dssp CCEEEEEEEEEEEEESCCCCHHHHCC----CCS--------------------S--------CCCCCCCEEEEEEETTEE
T ss_pred cccceEEEEEEEeCcCCCCcccccccc---ccc--------------------c--------cCCcCcCcEEEEEECCeE
Confidence 358999999999999999988544210 100 0 011238999999999988
Q ss_pred eEEeeecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeeccccccc--ceeeeEEEccCCCCCCCCC
Q 008859 93 VARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATG--ELISRWYDIIAPSGSPPKP 169 (551)
Q Consensus 93 v~rTrvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g--~~i~~w~~Ll~~~gkp~k~ 169 (551)
++||++++++.||+|||+|.|.+... ..|.|+|||.|.++ +++||.+.||++++..+ ...+.|++|. +
T Consensus 51 ~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~ 121 (136)
T 1gmi_A 51 IGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE--------P 121 (136)
T ss_dssp EEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------S
T ss_pred eeeeeEECCCcCCccCCEEEEEecCC-CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC--------C
Confidence 89999999999999999999998765 78999999999998 89999999999999864 3568999982 3
Q ss_pred CceEEEEeeeecc
Q 008859 170 GASIQLELKFTPC 182 (551)
Q Consensus 170 ~G~L~lsl~f~p~ 182 (551)
.|+|+|+++|.+.
T Consensus 122 ~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 122 EGKVYVIIDLSGS 134 (136)
T ss_dssp SCEEEEEEEEEEE
T ss_pred CeEEEEEEEEEec
Confidence 6999999999764
No 3
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=4.7e-20 Score=165.66 Aligned_cols=129 Identities=24% Similarity=0.358 Sum_probs=110.5
Q ss_pred CCCceeEEEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEE
Q 008859 7 SDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTV 86 (551)
Q Consensus 7 ~~~~~~~~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV 86 (551)
+++....--.|.|.|+|++|++|+++|..+. +||||+|
T Consensus 3 ~~s~~~~~~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v 40 (133)
T 2ep6_A 3 SGSSGDVKDVGILQVKVLKAADLLAADFSGK------------------------------------------SDPFCLL 40 (133)
T ss_dssp SCCCCSCCCSEEEEEEEEEEESCCCSSSSSC------------------------------------------CCEEEEE
T ss_pred cccccccCCceEEEEEEEeeECCCCCCCCCC------------------------------------------cCeEEEE
Confidence 3444444567999999999999999886553 8999999
Q ss_pred EECCeeeEEeeecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCC
Q 008859 87 VVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGS 165 (551)
Q Consensus 87 ~l~~~~v~rTrvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gk 165 (551)
.+.+.+ .||++++++.||.|||+|.|.+......|.|+|||.+.++ +++||.+.|++.++..|. ..||+|.+..++
T Consensus 41 ~~~~~~-~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~ 117 (133)
T 2ep6_A 41 ELGNDR-LQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLE 117 (133)
T ss_dssp EETTEE-EECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTT
T ss_pred EECCEE-EEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCC
Confidence 999876 5999999999999999999999987788999999999997 899999999999998765 589999766544
Q ss_pred CCCCCceEEEEeeeec
Q 008859 166 PPKPGASIQLELKFTP 181 (551)
Q Consensus 166 p~k~~G~L~lsl~f~p 181 (551)
. +..|+|+|+++|..
T Consensus 118 ~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 118 Q-AFKGVIYLEMDLIY 132 (133)
T ss_dssp S-CCSSEEEEEEEEEE
T ss_pred C-ccceEEEEEEEEEe
Confidence 3 46799999999853
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=8.8e-20 Score=164.99 Aligned_cols=124 Identities=28% Similarity=0.481 Sum_probs=108.2
Q ss_pred EeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCeeeE
Q 008859 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVA 94 (551)
Q Consensus 15 lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~~v~ 94 (551)
..|.|.|+|++|++|+++|. +. +||||+|.+.+.+ .
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~------------------------------------------~dpyv~v~~~~~~-~ 40 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GK------------------------------------------PDPIVSVIFKDEK-K 40 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SC------------------------------------------CCEEEEEECSSCE-E
T ss_pred CCcEEEEEEEEeeCCCCCCC-CC------------------------------------------CCeEEEEEECCEe-E
Confidence 46899999999999998876 43 8999999999876 7
Q ss_pred EeeecCCCCCCeEeeEEEEeecCC----CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEE---ccCCCCCC
Q 008859 95 RTRVLKNSQEPVWNEHFNIPLAHP----LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYD---IIAPSGSP 166 (551)
Q Consensus 95 rTrvi~ns~nP~WnE~F~i~vah~----~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~---Ll~~~gkp 166 (551)
||++++++.||+|||+|.|.+..+ ...|.|+|||.+.++ +++||.+.|++.++..+...+.|++ |.+..++.
T Consensus 41 kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~ 120 (140)
T 2dmh_A 41 KTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQD 120 (140)
T ss_dssp ECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCE
T ss_pred EeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCC
Confidence 999999999999999999998753 567999999999998 7899999999999998888899988 76665543
Q ss_pred CCCCceEEEEeeeeccCC
Q 008859 167 PKPGASIQLELKFTPCDK 184 (551)
Q Consensus 167 ~k~~G~L~lsl~f~p~~~ 184 (551)
..|+|+|+++|.|...
T Consensus 121 --~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 121 --TGATIDLVIGYDPPSG 136 (140)
T ss_dssp --EEEEEEEEEEECCCBS
T ss_pred --CCCEEEEEEEEECCCC
Confidence 4599999999998654
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.82 E-value=1e-19 Score=167.22 Aligned_cols=124 Identities=21% Similarity=0.367 Sum_probs=101.5
Q ss_pred EeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----
Q 008859 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (551)
Q Consensus 15 lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~---- 90 (551)
-.|.|.|+|++|++|+++|..+. +||||+|.+..
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~ 55 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGA------------------------------------------SDPYVRVTLYDPMNG 55 (153)
T ss_dssp TCEEEEEEEEEEESCC-------------------------------------------------CCEEEEEEEEETTTE
T ss_pred CccEEEEEEEEeeCCCCCCCCCC------------------------------------------CCcEEEEEEECCCCc
Confidence 35789999999999998886553 89999999964
Q ss_pred -eeeEEeeecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeeccccccccee------eeEEEccCC
Q 008859 91 -ATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELI------SRWYDIIAP 162 (551)
Q Consensus 91 -~~v~rTrvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i------~~w~~Ll~~ 162 (551)
....||++++++.||+|||+|.|.+......|.|+|||.+.++ +++||.+.|++.++..+... ..||+|...
T Consensus 56 ~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~ 135 (153)
T 3b7y_A 56 VLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPR 135 (153)
T ss_dssp EEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCS
T ss_pred cceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccc
Confidence 3568999999999999999999999888788999999999998 89999999999999866532 589999654
Q ss_pred CCCCCCCCceEEEEeeeec
Q 008859 163 SGSPPKPGASIQLELKFTP 181 (551)
Q Consensus 163 ~gkp~k~~G~L~lsl~f~p 181 (551)
.++ .+..|+|+|+++|.|
T Consensus 136 ~~~-~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 136 SHK-SRVKGYLRLKMTYLP 153 (153)
T ss_dssp STT-CCCCSEEEEEEEECC
T ss_pred cCC-CCcceEEEEEEEEeC
Confidence 433 356799999999986
No 6
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.82 E-value=3.6e-20 Score=166.69 Aligned_cols=124 Identities=24% Similarity=0.497 Sum_probs=108.6
Q ss_pred EeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCeeeE
Q 008859 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVA 94 (551)
Q Consensus 15 lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~~v~ 94 (551)
..|.|.|+|++|++|+++|..+. +||||+|.+.+.. .
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~-~ 44 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNN------------------------------------------MDPYVQLTCRTQD-Q 44 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCS------------------------------------------SCCCEEEESSSCE-E
T ss_pred CcEEEEEEEEeccCCCCcccCCC------------------------------------------cCceEEEEECCcc-c
Confidence 57999999999999999886553 8999999998876 5
Q ss_pred EeeecC-CCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeecccc-cccceeeeEEEccCCCCCCCCCCc
Q 008859 95 RTRVLK-NSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTI-ATGELISRWYDIIAPSGSPPKPGA 171 (551)
Q Consensus 95 rTrvi~-ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l-~~g~~i~~w~~Ll~~~gkp~k~~G 171 (551)
||++++ ++.||+|||+|.|.+......|.|+|||.+.++ +++||.+.|++.++ ..++....||+|. ..+ +..|
T Consensus 45 kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~---~~~G 120 (136)
T 1wfj_A 45 KSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDE---EYKG 120 (136)
T ss_dssp ECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETT---EEEE
T ss_pred eeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCC---ccCE
Confidence 999998 899999999999999987788999999999998 89999999999999 4566778999996 322 3569
Q ss_pred eEEEEeeeeccCCC
Q 008859 172 SIQLELKFTPCDKN 185 (551)
Q Consensus 172 ~L~lsl~f~p~~~~ 185 (551)
+|+|+++|.|...+
T Consensus 121 ~i~l~l~~~p~~~~ 134 (136)
T 1wfj_A 121 EIWVALSFKPSGPS 134 (136)
T ss_dssp EEEEEEEEEECCSC
T ss_pred EEEEEEEEEeCCCC
Confidence 99999999997553
No 7
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=99.82 E-value=5.4e-21 Score=209.21 Aligned_cols=159 Identities=18% Similarity=0.175 Sum_probs=110.9
Q ss_pred cchHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcC--CeEEEEEeCCCCccCccCCC
Q 008859 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEG--VRVLLLVWDDKTSHDKLGVK 318 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~G--V~V~iLvwD~~~s~~~~~~~ 318 (551)
+++|++|+++|++||++|+|++|++ ++++. .+..|.++|++||+|| |+||||+ |+.++....
T Consensus 65 ~~~~~~l~~~I~~Ak~~I~i~~y~~------~~~d~------~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~--- 128 (506)
T 1v0w_A 65 KRLLAKMTENIGNATRTVDISTLAP------FPNGA------FQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMN--- 128 (506)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEESS------CCCHH------HHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCC---
T ss_pred HHHHHHHHHHHHHhccEEEEEEeec------cCCCh------HHHHHHHHHHHHHhCCCCcEEEEEE-eCccccccc---
Confidence 5789999999999999999999962 12222 2479999999999999 9999997 665433210
Q ss_pred CCCcccCCcHHHHhHhcCCCcEEEecCCCCcccccccccccccccccCccceEEEccCCCCCCcceEEEEceeecccccc
Q 008859 319 TPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRY 398 (551)
Q Consensus 319 ~~g~~~t~~~~~~~~~~~~~v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dL~~~R~ 398 (551)
.......+.|+..|+++. +..+.....+ .. ....+.+||||++|||++ +||+||+||++++|
T Consensus 129 ------~~~~~~~~~L~~~g~~~~--~~~~~~~~~~-~~-~~~~~~r~H~K~~ViD~~--------~a~~Gg~Nl~~d~y 190 (506)
T 1v0w_A 129 ------VIPSKYRDELTAKLGKAA--ENITLNVASM-TT-SKTAFSWNHSKILVVDGQ--------SALTGGINSWKDDY 190 (506)
T ss_dssp ------CHHHHHHHHHHHHHGGGG--GGEEEEEEEE-CS-BTTTTBCBCCCEEEETTT--------EEEEESCCCCHHHH
T ss_pred ------cCCHHHHHHHHhccccee--ecCccccccc-cc-cCCccccceeeEEEECCc--------EEEeeccccCcccc
Confidence 012344555555444321 0001000000 00 001234999999999998 99999999987677
Q ss_pred CCCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCHHHHHHHHHHHHHHHhhcC
Q 008859 399 DTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATK 461 (551)
Q Consensus 399 Dt~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GPaa~dv~~~F~~rW~~~~~ 461 (551)
.+. ..+|||+|++|+||+|.++...|.++|+....
T Consensus 191 ~~~----------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~ 225 (506)
T 1v0w_A 191 LDT----------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQ 225 (506)
T ss_dssp TSS----------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred ccC----------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhcc
Confidence 530 14899999999999999999999999997653
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.81 E-value=8.4e-19 Score=160.17 Aligned_cols=121 Identities=23% Similarity=0.464 Sum_probs=104.2
Q ss_pred EEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCeee
Q 008859 14 YLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATV 93 (551)
Q Consensus 14 ~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~~v 93 (551)
...|.|.|+|++|++|+++|..+. +||||+|.+++..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~- 50 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGS------------------------------------------SDPYVTVQVGKTK- 50 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEETTEE-
T ss_pred ccccEEEEEEEeeeCCCCCCCCCC------------------------------------------cCeEEEEEECCEE-
Confidence 467999999999999999887553 8999999998765
Q ss_pred EEeeecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCC-----------C-CceeEEEEeecccccccceeeeEEEccC
Q 008859 94 ARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVF-----------G-AQIIGTAAIPAHTIATGELISRWYDIIA 161 (551)
Q Consensus 94 ~rTrvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~-----------g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~ 161 (551)
.||++++++.||.|||+|.|.+..+...|.|+|||.+.+ + +++||.+.||+.++. ...+.|++|..
T Consensus 51 ~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~ 128 (148)
T 3kwu_A 51 KRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDK 128 (148)
T ss_dssp EECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBC
T ss_pred EECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEccc
Confidence 699999999999999999999988888999999999986 5 899999999999993 45689999964
Q ss_pred CCCCCCCCCceEEEEeeee
Q 008859 162 PSGSPPKPGASIQLELKFT 180 (551)
Q Consensus 162 ~~gkp~k~~G~L~lsl~f~ 180 (551)
..++ ....|+|+|+++|.
T Consensus 129 ~~~~-~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 129 RTDK-SAVSGAIRLHISVE 146 (148)
T ss_dssp SSTT-CCCCCEEEEEEEEE
T ss_pred CCCC-CCCceEEEEEEEEE
Confidence 4333 34679999999985
No 9
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.80 E-value=7.2e-19 Score=165.74 Aligned_cols=124 Identities=21% Similarity=0.377 Sum_probs=98.8
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCe----
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQA---- 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~---- 91 (551)
-|.|.|+|++|++|+++|.++. +||||+|.+.+.
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~------------------------------------------~DPyv~v~l~~~~~~~ 44 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGA------------------------------------------SDPYVRVTLYDPMSGI 44 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCC------------------------------------------CCEEEEEEEEETTTEE
T ss_pred cEEEEEEEEEeeCCCCcCCCCC------------------------------------------cCcEEEEEEECCCCCc
Confidence 3789999999999999887654 899999999641
Q ss_pred -eeEEeeecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeeccccccccee-e-----eEEEccCCC
Q 008859 92 -TVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELI-S-----RWYDIIAPS 163 (551)
Q Consensus 92 -~v~rTrvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i-~-----~w~~Ll~~~ 163 (551)
...||++++++.||.|||+|.|.+......|.|+|||.+.++ +++||.+.|++.++..+... + .||+|....
T Consensus 45 ~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~ 124 (176)
T 3m7f_B 45 LTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS 124 (176)
T ss_dssp EEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS
T ss_pred ccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC
Confidence 567999999999999999999999887778999999999998 89999999999999876433 2 799996544
Q ss_pred CCCCCCCceEEEEeeeecc
Q 008859 164 GSPPKPGASIQLELKFTPC 182 (551)
Q Consensus 164 gkp~k~~G~L~lsl~f~p~ 182 (551)
++ .+..|+|+|+++|.|.
T Consensus 125 ~~-~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 125 HK-SRVKGYLRLKMTYLPK 142 (176)
T ss_dssp TT-CCCCSEEEEEEEECC-
T ss_pred CC-CccCEEEEEEEEEEeC
Confidence 33 3467999999999997
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.80 E-value=5e-19 Score=156.97 Aligned_cols=118 Identities=25% Similarity=0.422 Sum_probs=99.2
Q ss_pred eeEEEEEEEEeecCCCCC---CCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC--
Q 008859 16 HGDLDLKIIRARRLPNMD---MMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ-- 90 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~-- 90 (551)
+|.|.|+|++|++|++++ ..+ .+||||+|.+.+
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g------------------------------------------~~dpyv~v~~~~~~ 39 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLD------------------------------------------TPDPYVELFISTTP 39 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHC------------------------------------------CCCEEEEEECTTST
T ss_pred CcEEEEEEEeeeCCCCCCccccCC------------------------------------------CCCCEEEEEEccCC
Confidence 589999999999999853 222 289999999986
Q ss_pred eeeEEeeecCCCCCCeEeeEEEEeecC-CCCeEEEEEEecCCCCCceeEEEEeecccccccceeeeEEEccCCCCCCCCC
Q 008859 91 ATVARTRVLKNSQEPVWNEHFNIPLAH-PLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKP 169 (551)
Q Consensus 91 ~~v~rTrvi~ns~nP~WnE~F~i~vah-~~~~l~f~Vkd~d~~g~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gkp~k~ 169 (551)
....||++++++.||+|||+|.|.+.. ....|.|+|||.+.+++++||.+.|++.++..|...+.|++|.. ..
T Consensus 40 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~ 113 (126)
T 1rlw_A 40 DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ------VT 113 (126)
T ss_dssp TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT------TE
T ss_pred CceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC------Cc
Confidence 356899999999999999999999954 45679999999999999999999999999999999999999942 23
Q ss_pred CceEEEEeeeec
Q 008859 170 GASIQLELKFTP 181 (551)
Q Consensus 170 ~G~L~lsl~f~p 181 (551)
.|.|+|+|+-.|
T Consensus 114 ~g~i~~~le~~~ 125 (126)
T 1rlw_A 114 EMVLEMSLEVAS 125 (126)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEEEeCC
Confidence 467777776543
No 11
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.78 E-value=3.6e-18 Score=153.08 Aligned_cols=120 Identities=19% Similarity=0.357 Sum_probs=100.8
Q ss_pred eEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC-eeeEE
Q 008859 17 GDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ-ATVAR 95 (551)
Q Consensus 17 G~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~-~~v~r 95 (551)
..|.|+|++|++|+++|..+. +||||+|.+.+ ....|
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~------------------------------------------sDpyv~v~~~~~~~~~k 42 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRL------------------------------------------PDPFAKIVVDGSGQCHS 42 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCC------------------------------------------CCEEEEEEETTTCCEEE
T ss_pred EEEEEEEEEeECCCCCCCCCC------------------------------------------cCeEEEEEECCCCceEE
Confidence 468999999999999887654 89999999975 56689
Q ss_pred eeecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC----CceeEEEEeeccccc-ccceeeeEEEccCCC-CCCCCC
Q 008859 96 TRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG----AQIIGTAAIPAHTIA-TGELISRWYDIIAPS-GSPPKP 169 (551)
Q Consensus 96 Trvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g----~~lIG~v~Ipl~~l~-~g~~i~~w~~Ll~~~-gkp~k~ 169 (551)
|++++++.||+|||+|.|.+..+. .|.|+|||.+.++ +++||.+.||++.+. .+.....|++|.... .++.+.
T Consensus 43 T~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~ 121 (132)
T 3pyc_A 43 TDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAV 121 (132)
T ss_dssp CCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCC
T ss_pred CCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCce
Confidence 999999999999999999998765 5999999999987 699999999999983 344456899996653 233456
Q ss_pred CceEEEEeee
Q 008859 170 GASIQLELKF 179 (551)
Q Consensus 170 ~G~L~lsl~f 179 (551)
.|+|+|+|++
T Consensus 122 ~G~i~v~l~~ 131 (132)
T 3pyc_A 122 RGQIVVSLQT 131 (132)
T ss_dssp CSEEEEEEEE
T ss_pred eEEEEEEEEc
Confidence 8999999875
No 12
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=2.5e-18 Score=162.34 Aligned_cols=126 Identities=18% Similarity=0.296 Sum_probs=103.5
Q ss_pred EEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCeee
Q 008859 14 YLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATV 93 (551)
Q Consensus 14 ~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~~v 93 (551)
...+.|.|+|++|++|++.+.++. +||||+|.+.+ ..
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~------------------------------------------sDPYv~v~~~~-~~ 69 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFG------------------------------------------PSPYVEVTVDG-QS 69 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCC------------------------------------------CCEEEEEEETT-EE
T ss_pred CCceEEEEEEEEeECCCCcccCCC------------------------------------------CCeEEEEEECC-EE
Confidence 467999999999999994433222 89999999998 56
Q ss_pred EEeeecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeecccccccc-----eeeeEEEccCCCCCCC
Q 008859 94 ARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGE-----LISRWYDIIAPSGSPP 167 (551)
Q Consensus 94 ~rTrvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~-----~i~~w~~Ll~~~gkp~ 167 (551)
.||++++++.||+|||+|.|.+. +...|.|+|||.|.++ +++||.+.|++.++..+. .+..|++|....+ ..
T Consensus 70 ~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~-~~ 147 (173)
T 2nq3_A 70 KKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE-PT 147 (173)
T ss_dssp EECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC-TT
T ss_pred eEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC-CC
Confidence 89999999999999999999985 4778999999999997 889999999999987532 2467999966532 33
Q ss_pred CCCceEEEEeeeeccCC
Q 008859 168 KPGASIQLELKFTPCDK 184 (551)
Q Consensus 168 k~~G~L~lsl~f~p~~~ 184 (551)
+..|+|.|++.|.+...
T Consensus 148 ~~~G~L~v~l~~l~~~~ 164 (173)
T 2nq3_A 148 ETIGDLSICLDGLQLES 164 (173)
T ss_dssp SEEEEEEEEEESEECC-
T ss_pred cccEEEEEEEeeeecch
Confidence 46799999999998743
No 13
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.73 E-value=3.5e-17 Score=147.59 Aligned_cols=109 Identities=17% Similarity=0.411 Sum_probs=92.4
Q ss_pred ceeEEEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC
Q 008859 10 EKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP 89 (551)
Q Consensus 10 ~~~~~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~ 89 (551)
...-+..|.|.|+|++|++|+. +..+. +||||+|.+.
T Consensus 13 ~~~~~~~~~L~V~V~~a~~L~~-~~~g~------------------------------------------~DPyv~v~l~ 49 (134)
T 2b3r_A 13 LSVSYRNGTLFIMVMHIKDLVT-EDGAD------------------------------------------PNPYVKTYLL 49 (134)
T ss_dssp EEEEEETTEEEEEEEEEECCCC-TTSCC------------------------------------------CCEEEEEEEE
T ss_pred EEEeecCCEEEEEEEEeeCCCC-CCCCC------------------------------------------CCeEEEEEEE
Confidence 3344567999999999999995 44332 8999999982
Q ss_pred ----CeeeEEeeecCCCCCCeEeeEEEEe-ecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEcc
Q 008859 90 ----QATVARTRVLKNSQEPVWNEHFNIP-LAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDII 160 (551)
Q Consensus 90 ----~~~v~rTrvi~ns~nP~WnE~F~i~-vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll 160 (551)
.....||++++++.||+|||+|.|. +... ...|.|+|||.+.++ +++||.+.|++.++..++..++||+|.
T Consensus 50 ~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 50 PDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp SCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred cCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 2456799999999999999999999 7643 468999999999998 899999999999999888999999995
Q ss_pred C
Q 008859 161 A 161 (551)
Q Consensus 161 ~ 161 (551)
+
T Consensus 130 ~ 130 (134)
T 2b3r_A 130 A 130 (134)
T ss_dssp C
T ss_pred C
Confidence 4
No 14
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=9.6e-17 Score=161.78 Aligned_cols=126 Identities=29% Similarity=0.495 Sum_probs=108.9
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC--eee
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--ATV 93 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~--~~v 93 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+.. ...
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~------------------------------------------~dpyv~v~~~~~~~~~ 55 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGT------------------------------------------SDPYVKVFLLPDKKKK 55 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSS------------------------------------------CCEEEEEEEETCTTSC
T ss_pred CCEEEEEEEEeeCCCCCCCCCC------------------------------------------CCeEEEEEEEcCCCce
Confidence 5899999999999999886553 89999999953 346
Q ss_pred EEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCCCCCC
Q 008859 94 ARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKP 169 (551)
Q Consensus 94 ~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gkp~k~ 169 (551)
.||++++++.||.|||+|.|.+... ...|.|+|+|.+.++ +++||.+.|++.++..+...+.|++|....+.....
T Consensus 56 ~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~ 135 (284)
T 2r83_A 56 FETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEK 135 (284)
T ss_dssp EECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCC
T ss_pred EeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccc
Confidence 7999999999999999999998763 468999999999998 899999999999999898999999997665544456
Q ss_pred CceEEEEeeeeccC
Q 008859 170 GASIQLELKFTPCD 183 (551)
Q Consensus 170 ~G~L~lsl~f~p~~ 183 (551)
.|+|.++++|.|..
T Consensus 136 ~G~i~l~l~~~p~~ 149 (284)
T 2r83_A 136 LGDICFSLRYVPTA 149 (284)
T ss_dssp CCEEEEEEEEETTT
T ss_pred cccEEEEEEecCcC
Confidence 79999999998753
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=3.3e-17 Score=150.62 Aligned_cols=104 Identities=33% Similarity=0.545 Sum_probs=92.0
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC--Ceee
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QATV 93 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~--~~~v 93 (551)
.+.|.|+|++|++|+++|..+. +||||+|.+. +...
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~~ 78 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGT------------------------------------------SDPYVKVFLLPDKKKK 78 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEETTCCSC
T ss_pred CCEEEEEEEEeECCCCccCCCC------------------------------------------cCeEEEEEEEcCCCce
Confidence 4899999999999999886543 8999999994 3356
Q ss_pred EEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccC
Q 008859 94 ARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIA 161 (551)
Q Consensus 94 ~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~ 161 (551)
.||++++++.||+|||+|.|.+... ...|.|+|||.+.++ +++||.+.|++.++..|+..+.|++|.+
T Consensus 79 ~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 79 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp EECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred EeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 7999999999999999999998753 468999999999997 8999999999999998989999999954
No 16
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.71 E-value=3.3e-17 Score=148.63 Aligned_cols=103 Identities=33% Similarity=0.547 Sum_probs=91.1
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC--Ceee
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QATV 93 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~--~~~v 93 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+. +...
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~l~~~~~~~ 70 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGT------------------------------------------SDPYVKVFLLPDKKKK 70 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBC------------------------------------------CCEEEEEEEESCCSCC
T ss_pred CCEEEEEEEEecCCCCCCCCCC------------------------------------------cCcEEEEEEECCCCcc
Confidence 4789999999999998876543 8999999993 3456
Q ss_pred EEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEcc
Q 008859 94 ARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDII 160 (551)
Q Consensus 94 ~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll 160 (551)
.||++++++.||+|||+|.|.+... ...|.|+|||.+.++ +++||.+.|++.++..+...+.|++|.
T Consensus 71 ~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 71 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp EECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred EECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 8999999999999999999998654 368999999999997 899999999999999999999999984
No 17
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=5.1e-17 Score=148.69 Aligned_cols=106 Identities=23% Similarity=0.398 Sum_probs=92.4
Q ss_pred EEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC---
Q 008859 14 YLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--- 90 (551)
Q Consensus 14 ~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~--- 90 (551)
+..|.|.|+|++|++|+++|..+. +||||+|.+..
T Consensus 28 ~~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~ 65 (149)
T 1a25_A 28 IDREVLIVVVRDAKNLVPMDPNGL------------------------------------------SDPYVKLKLIPDPK 65 (149)
T ss_dssp ESSSEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEESCTT
T ss_pred ecCCEEEEEEEEeeCCCCCCCCCC------------------------------------------cCeEEEEEEECCCC
Confidence 446899999999999999886553 89999999964
Q ss_pred -eeeEEeeecCCCCCCeEeeEEEEeecCC--CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCC
Q 008859 91 -ATVARTRVLKNSQEPVWNEHFNIPLAHP--LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (551)
Q Consensus 91 -~~v~rTrvi~ns~nP~WnE~F~i~vah~--~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~ 162 (551)
....||++++++.||+|||+|.|.+... ...|.|+|||.+.++ +++||.+.|++.++..+ ..+.||+|.+.
T Consensus 66 ~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 66 SESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp CSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred CcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 4568999999999999999999998764 357999999999997 89999999999999876 58899999653
No 18
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.71 E-value=6.7e-17 Score=145.12 Aligned_cols=106 Identities=23% Similarity=0.417 Sum_probs=92.0
Q ss_pred EEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC----
Q 008859 14 YLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP---- 89 (551)
Q Consensus 14 ~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~---- 89 (551)
+-.|.|.|+|++|++|+++|..+. +||||+|.+.
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~~~------------------------------------------~dpyv~v~~~~~~~ 50 (137)
T 3rdl_A 13 VTDEKLHVTVRDAKNLIPMDPNGL------------------------------------------SDPYVKLKLIPDPK 50 (137)
T ss_dssp EETTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEECCTT
T ss_pred EcCCEEEEEEEEeeCCCCCCCCCC------------------------------------------CCeeEEEEEEcCCC
Confidence 456999999999999999886553 8999999994
Q ss_pred CeeeEEeeecCCCCCCeEeeEEEEeecCC--CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCC
Q 008859 90 QATVARTRVLKNSQEPVWNEHFNIPLAHP--LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (551)
Q Consensus 90 ~~~v~rTrvi~ns~nP~WnE~F~i~vah~--~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~ 162 (551)
+....||++++++.||.|||+|.|.+... ...|.|+|||.+.++ +++||.+.|++.++..+. .++||+|.+.
T Consensus 51 ~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 51 NESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 34568999999999999999999998654 346999999999998 899999999999998665 8999999654
No 19
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.70 E-value=3.9e-17 Score=149.31 Aligned_cols=108 Identities=16% Similarity=0.304 Sum_probs=91.2
Q ss_pred eeEEEEEEEEeecCCCCCC-CchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----
Q 008859 16 HGDLDLKIIRARRLPNMDM-MSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~---- 90 (551)
.|.|.|+|++|++|+.+|. .+. +||||+|.+..
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~------------------------------------------~dpyv~v~l~~~~~~ 59 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKR------------------------------------------SNPYVKTYLLPDKSR 59 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTB------------------------------------------CCEEEEEEEETCCSG
T ss_pred CCEEEEEEEEecCCCCcccCCCC------------------------------------------CCeEEEEEEEcCCcc
Confidence 4899999999999998773 332 89999999953
Q ss_pred eeeEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCC
Q 008859 91 ATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGS 165 (551)
Q Consensus 91 ~~v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gk 165 (551)
....||++++++.||+|||+|.|.+... ...|.|+|||.|.++ +++||.+.||+.++..+...+.|++|....+.
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISA 138 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC---
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCcccc
Confidence 2368999999999999999999998775 345999999999998 89999999999999988888999999665444
No 20
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=2.2e-17 Score=149.45 Aligned_cols=108 Identities=28% Similarity=0.426 Sum_probs=93.4
Q ss_pred EEEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCe-
Q 008859 13 IYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQA- 91 (551)
Q Consensus 13 ~~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~- 91 (551)
.+..|.|.|+|++|++|+++|..+. +||||+|.+.+.
T Consensus 14 ~y~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~Dpyv~v~~~~~~ 51 (142)
T 1rh8_A 14 NYDLGNLIIHILQARNLVPRDNNGY------------------------------------------SDPFVKVYLLPGR 51 (142)
T ss_dssp EEETTEEEEEEEEEESCCCCSSSSC------------------------------------------SCCEEEEEETTSS
T ss_pred EEcCCEEEEEEEEecCCCCCCCCCC------------------------------------------CCceEEEEEecCC
Confidence 3567999999999999999886553 899999999763
Q ss_pred ------------eeEEeeecCCCCCCeEeeEEEEe-ecC---CCCeEEEEEEecCCCC-CceeEEEEeecccccccceee
Q 008859 92 ------------TVARTRVLKNSQEPVWNEHFNIP-LAH---PLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELIS 154 (551)
Q Consensus 92 ------------~v~rTrvi~ns~nP~WnE~F~i~-vah---~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~ 154 (551)
...||++++++.||+|||+|.|. +.. ....|.|+|||.+.++ +++||.+.|++.++..+....
T Consensus 52 ~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~ 131 (142)
T 1rh8_A 52 GQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTP 131 (142)
T ss_dssp CCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCC
T ss_pred CcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCC
Confidence 24799999999999999999997 543 3568999999999998 899999999999998888889
Q ss_pred eEEEccCC
Q 008859 155 RWYDIIAP 162 (551)
Q Consensus 155 ~w~~Ll~~ 162 (551)
.||+|...
T Consensus 132 ~W~~L~~~ 139 (142)
T 1rh8_A 132 RWYPLKEQ 139 (142)
T ss_dssp EEEECBCC
T ss_pred eEEECCcc
Confidence 99999543
No 21
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=9.2e-17 Score=145.50 Aligned_cols=105 Identities=29% Similarity=0.476 Sum_probs=91.4
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC--Ceee
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QATV 93 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~--~~~v 93 (551)
.+.|.|+|++|++|+++|..+. +||||+|.+. +...
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~~ 62 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGT------------------------------------------SDPFVKIYLLPDKKHK 62 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSC------------------------------------------CCEEEEEEEESCCSSE
T ss_pred CCEEEEEEEEeECCCCCCCCCC------------------------------------------CCcEEEEEEECCCCcc
Confidence 5889999999999999886543 8999999994 3456
Q ss_pred EEeeecCCCCCCeEeeEEEEeecC----CCCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCC
Q 008859 94 ARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (551)
Q Consensus 94 ~rTrvi~ns~nP~WnE~F~i~vah----~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~ 162 (551)
.||++++++.||+|||+|.|.+.. ....|.|+|||.+.++ +++||.+.|++.++..+...+.|++|...
T Consensus 63 ~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 63 LETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred EeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 899999999999999999998533 2467999999999998 89999999999999988889999999543
No 22
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.70 E-value=5.5e-17 Score=152.42 Aligned_cols=107 Identities=22% Similarity=0.420 Sum_probs=93.4
Q ss_pred EEeeEEEEEEEEeecCCCCCC-CchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCe-
Q 008859 14 YLHGDLDLKIIRARRLPNMDM-MSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQA- 91 (551)
Q Consensus 14 ~lhG~L~v~I~eA~~L~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~- 91 (551)
+-.|.|.|+|++|++|+++|. .+. +||||+|.+...
T Consensus 27 y~~~~L~V~v~~a~~L~~~d~~~g~------------------------------------------~DPyv~v~l~~~~ 64 (171)
T 2q3x_A 27 DKKGQLEVEVIRARSLTQKPGSKST------------------------------------------PAPYVKVYLLENG 64 (171)
T ss_dssp EETTEEEEEEEEEESCCCCC---CC------------------------------------------CEEEEEEEEEETT
T ss_pred ECCCEEEEEEEEeeCCCCCCcCCCC------------------------------------------CCceEEEEEECCC
Confidence 456899999999999999884 332 899999998542
Q ss_pred ---eeEEeeecCCCCCCeEeeEEEEeecCCCCeEEEEEE-ecCCCC-CceeEEEEeecccccccceeeeEEEccCC
Q 008859 92 ---TVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVK-DDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (551)
Q Consensus 92 ---~v~rTrvi~ns~nP~WnE~F~i~vah~~~~l~f~Vk-d~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~ 162 (551)
...||++++++.||+|||+|.|.+......|.|+|| |.|.++ +++||.+.|+++++..++..++||+|...
T Consensus 65 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 65 ACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp EEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred ccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 368999999999999999999999877778999999 999998 79999999999999988889999999544
No 23
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=9.1e-17 Score=142.91 Aligned_cols=101 Identities=26% Similarity=0.444 Sum_probs=83.7
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC----Ce
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP----QA 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~----~~ 91 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+. +.
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~------------------------------------------~dpyv~v~~~~~~~~~ 54 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRP------------------------------------------RNPYVKIYFLPDRSDK 54 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCC------------------------------------------BCEEEEEEEESSCSGG
T ss_pred CCEEEEEEEEeeCCCCCCCCCC------------------------------------------CCCEEEEEEecCCCCC
Confidence 3789999999999999886553 8999999992 34
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeecCC----CCeEEEEEEecCCCC---CceeEEEEeecccccccceeeeEEEc
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLAHP----LSNLEIQVKDDDVFG---AQIIGTAAIPAHTIATGELISRWYDI 159 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~vah~----~~~l~f~Vkd~d~~g---~~lIG~v~Ipl~~l~~g~~i~~w~~L 159 (551)
...||++++++.||+|||+|.|.+.+. ...|.|+|||.+.++ +++||.+.|++.++.... .++||+|
T Consensus 55 ~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 55 NKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp GEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred cceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 568999999999999999999996432 467999999999997 799999999999987644 8899997
No 24
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=5.7e-17 Score=146.28 Aligned_cols=107 Identities=24% Similarity=0.416 Sum_probs=90.5
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC----Ce
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP----QA 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~----~~ 91 (551)
.+.|.|+|++|++|+++|..+. +||||+|.+. ..
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~~ 57 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRP------------------------------------------RNPYVKIYFLPDRSDK 57 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCC------------------------------------------CCEEEECCCSSCCSSS
T ss_pred CCEEEEEEEEccCCCCcCCCCC------------------------------------------CCCEEEEEEecCCCCC
Confidence 4789999999999999887653 8999999983 34
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeecCC----CCeEEEEEEecCCCC---CceeEEEEeecccccccceeeeEEEccCCCC
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLAHP----LSNLEIQVKDDDVFG---AQIIGTAAIPAHTIATGELISRWYDIIAPSG 164 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~vah~----~~~l~f~Vkd~d~~g---~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~g 164 (551)
...||++++++.||+|||+|.|.+.+. ...|.|+|||.+.++ +++||.+.|++.++.... .+.||+|.....
T Consensus 58 ~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~ 136 (141)
T 1v27_A 58 NKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDS 136 (141)
T ss_dssp SCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSS
T ss_pred cceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccccc
Confidence 567999999999999999999995432 367999999999997 799999999999987654 889999976544
Q ss_pred C
Q 008859 165 S 165 (551)
Q Consensus 165 k 165 (551)
.
T Consensus 137 g 137 (141)
T 1v27_A 137 G 137 (141)
T ss_dssp C
T ss_pred C
Confidence 3
No 25
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=2e-16 Score=143.26 Aligned_cols=105 Identities=23% Similarity=0.421 Sum_probs=89.5
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----e
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~----~ 91 (551)
.|.|.|+|++|++|+++|..+ +||||+|.+.. .
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-------------------------------------------~dpyv~v~l~~~~~~~ 59 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-------------------------------------------SDPYVRMYLLPDKRRS 59 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-------------------------------------------CCEEEEEEEESCCCSS
T ss_pred CCEEEEEEEEeECCCCCCCCC-------------------------------------------CCeeEEEEEEcCCCCC
Confidence 578999999999999877432 79999999942 2
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC--C-ceeEEEEeecccccccceeeeEEEccCCC
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG--A-QIIGTAAIPAHTIATGELISRWYDIIAPS 163 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g--~-~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~ 163 (551)
...||++++++.||+|||+|.|.+... ...|.|+|||.+.++ + ++||.+.|++.++..+...+.|++|....
T Consensus 60 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 60 GRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp SCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred CcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 567999999999999999999998653 357999999999886 3 69999999999998877889999996554
No 26
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.68 E-value=4.3e-17 Score=151.12 Aligned_cols=103 Identities=25% Similarity=0.426 Sum_probs=90.1
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC---e-
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---A- 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~---~- 91 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+.. .
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~------------------------------------------sDPyVkv~l~~~~~~~ 79 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQD------------------------------------------QKVNIRVAVLPCSEST 79 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCC------------------------------------------SEEEEEEEEESCSCHH
T ss_pred CCEEEEEEEEccCcCCcccCCC------------------------------------------CCEEEEEEEecCCCCC
Confidence 3789999999999999886553 89999999954 2
Q ss_pred -eeEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeeccccc-ccceeeeEEEcc
Q 008859 92 -TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIA-TGELISRWYDII 160 (551)
Q Consensus 92 -~v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~-~g~~i~~w~~Ll 160 (551)
...||++++++.||+|||+|.|.+... ...|.|+|||.|.++ +++||.+.|++.++. .++....||+|+
T Consensus 80 ~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 80 TCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred ccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 368999999999999999999998764 457999999999998 899999999999996 477889999984
No 27
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.67 E-value=2.9e-16 Score=144.50 Aligned_cols=105 Identities=23% Similarity=0.419 Sum_probs=89.2
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----e
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~----~ 91 (551)
.|.|.|+|++|++|+++| .+. +||||+|.+.. .
T Consensus 26 ~~~L~V~v~~a~~L~~~d-~g~------------------------------------------~Dpyv~v~l~~~~~~~ 62 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLISKQ-PGT------------------------------------------CDPYVKISLIPEDSRL 62 (153)
T ss_dssp SSEEEEEEEEEESCCCCS-SSC------------------------------------------CCEEEEEEEESCSCCT
T ss_pred CCEEEEEEEEeeCCCCCC-CCC------------------------------------------CCEEEEEEEEcCCCCc
Confidence 488999999999999887 332 89999999932 3
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeec--CCCCeEEEEEEecCCCC--CceeEEEEeecccccc-cceeeeEEEccCCC
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLA--HPLSNLEIQVKDDDVFG--AQIIGTAAIPAHTIAT-GELISRWYDIIAPS 163 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~va--h~~~~l~f~Vkd~d~~g--~~lIG~v~Ipl~~l~~-g~~i~~w~~Ll~~~ 163 (551)
...||++++++.||+|||+|.|.+. .....|.|+|||.+.++ +++||.+.|++.++.. +...++||+|.+..
T Consensus 63 ~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 63 RHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp TCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred cEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 4579999999999999999999983 34456999999999985 7999999999999985 78899999996643
No 28
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.67 E-value=5.7e-17 Score=145.62 Aligned_cols=108 Identities=28% Similarity=0.448 Sum_probs=90.3
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----e
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~----~ 91 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+.+ .
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~~ 52 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGT------------------------------------------SDPYVKVWLMYKDKRV 52 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTB------------------------------------------CCEEEEEEEEETTEEE
T ss_pred CCeEEEEEEEeeCCCCcCCCCC------------------------------------------cCeEEEEEEEeCCCcc
Confidence 3889999999999998876543 89999999964 3
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeecCCC---CeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCCCC
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLAHPL---SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPP 167 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~vah~~---~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gkp~ 167 (551)
...||++++++.||+|||+|.|.+.... ..|.|+|+|.+.++ +++||.+.|++.++. ...+.|++|+...+++.
T Consensus 53 ~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~~~~~~~~ 130 (138)
T 3n5a_A 53 EKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP--GEVKHWKDMIARPRQPV 130 (138)
T ss_dssp EEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH--HHHHHHHHHHHSTTCCE
T ss_pred ceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCC--hHHHHHHHHHhCCCCeE
Confidence 5679999999999999999999987664 57999999999998 899999999998743 44567888776666543
No 29
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=3.5e-16 Score=141.59 Aligned_cols=83 Identities=20% Similarity=0.341 Sum_probs=73.3
Q ss_pred CCcEEEEEEC---CeeeEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccce
Q 008859 80 SDPYVTVVVP---QATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGEL 152 (551)
Q Consensus 80 sDpYvtV~l~---~~~v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~ 152 (551)
+||||+|.+. +....||+|++++.||+|||+|.|.+... ...|.|+|||.|.++ +++||.+.|++.++..+..
T Consensus 44 sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~ 123 (138)
T 1wfm_A 44 CDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLG 123 (138)
T ss_dssp CCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTT
T ss_pred cceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCccc
Confidence 8999999993 44568999999999999999999998764 457999999999998 8999999999999987778
Q ss_pred eeeEEEccCC
Q 008859 153 ISRWYDIIAP 162 (551)
Q Consensus 153 i~~w~~Ll~~ 162 (551)
.+.|++|...
T Consensus 124 ~~~W~~L~~~ 133 (138)
T 1wfm_A 124 AAQWGELKTS 133 (138)
T ss_dssp CCEEEECCCC
T ss_pred ccceeeCcCC
Confidence 8999999653
No 30
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.66 E-value=3e-16 Score=142.17 Aligned_cols=103 Identities=29% Similarity=0.484 Sum_probs=89.9
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----e
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~----~ 91 (551)
.|.|.|+|++|++|++++..+. +||||+|.+.+ .
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~~ 65 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGL------------------------------------------ADPYVKLHLLPGASKS 65 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSC------------------------------------------CCEEEEEEEESCCSGG
T ss_pred CCEEEEEEEEecCCCCCCCCCC------------------------------------------CCCEEEEEEEcCCCCc
Confidence 4889999999999999886543 89999999965 3
Q ss_pred eeEEeeecCCCCCCeEeeEEEEe-ecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEcc
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIP-LAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDII 160 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~-vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll 160 (551)
...||++++++.||+|||+|.|. +... ...|.|+|||.+.++ +++||.+.|++.++..++...-|++|.
T Consensus 66 ~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 139 (142)
T 2chd_A 66 NKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLE 139 (142)
T ss_dssp GEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECB
T ss_pred ceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecc
Confidence 56899999999999999999998 5432 257999999999998 799999999999999888888899883
No 31
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.66 E-value=5.7e-17 Score=148.92 Aligned_cols=107 Identities=26% Similarity=0.391 Sum_probs=85.0
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEE--CCee-
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVV--PQAT- 92 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l--~~~~- 92 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+ .+..
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~~ 66 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGL------------------------------------------SDPYVKVNLYHAKKRI 66 (153)
T ss_dssp TTEEEEEEEEEESCC------C------------------------------------------CCEEEEEEEEETTEEE
T ss_pred CCEEEEEEEEeECCCCcCCCCC------------------------------------------CCeEEEEEEEeCCeEe
Confidence 5899999999999998886543 899999999 4432
Q ss_pred -eEEeeecCCCCCCeEeeEEEEeecCCC---CeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCCC
Q 008859 93 -VARTRVLKNSQEPVWNEHFNIPLAHPL---SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSP 166 (551)
Q Consensus 93 -v~rTrvi~ns~nP~WnE~F~i~vah~~---~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gkp 166 (551)
..||++++++.||+|||+|.|.+.... ..|.|+|||.+.++ +++||.+.|++.+ .+...+.|++|+...+++
T Consensus 67 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~~ 143 (153)
T 1w15_A 67 SKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRRQ 143 (153)
T ss_dssp EEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTCC
T ss_pred ceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCCe
Confidence 569999999999999999999987753 56999999999998 8999999999988 345566777776655554
No 32
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.66 E-value=2.4e-16 Score=151.61 Aligned_cols=135 Identities=14% Similarity=0.196 Sum_probs=99.9
Q ss_pred cchHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCCCCccCccCCCCC
Q 008859 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTP 320 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~~~~~~ 320 (551)
+..|+.|+++|++|+++|+|+.|+|. ...|.++|.++++|||+||||+ |......
T Consensus 45 ~~~~~~ll~~I~~A~~sI~i~~y~~~-----------------~~~i~~aL~~aa~rGV~Vrii~-D~~~~~~------- 99 (196)
T 4ggj_A 45 ESSLSRLLRALLAARSSLELCLFAFS-----------------SPQLGRAVQLLHQRGVRVRVIT-DCDYMAL------- 99 (196)
T ss_dssp CCHHHHHHHHHHTCSSEEEEEESCBC-----------------CHHHHHHHHHHHHTTCEEEEEE-SSCCC---------
T ss_pred HHHHHHHHHHHHHhheEEEEEEEEeC-----------------CHHHHHHHHHHHHcCCcEEEEE-ecccccc-------
Confidence 57899999999999999999998641 2589999999999999999997 7532211
Q ss_pred CcccCCcHHHHhHhcCCCcEEEecCCCCcccccccccccccccccCccceEEEccCCCCCCcceEEEEceeeccccccCC
Q 008859 321 GVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDT 400 (551)
Q Consensus 321 g~~~t~~~~~~~~~~~~~v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dL~~~R~Dt 400 (551)
.......|..+||++..... ....|+|++|||++ ++|+||.|++...+.
T Consensus 100 ------~~~~~~~l~~~gi~v~~~~~----------------~~~~H~K~~viD~~--------~~~~GS~N~t~~~~~- 148 (196)
T 4ggj_A 100 ------NGSQIGLLRKAGIQVRHDQD----------------LGYMHHKFAIVDKK--------VLITGSLNWTTQAIQ- 148 (196)
T ss_dssp -------CCHHHHHHHTTCEEEECCS----------------SSCCCCEEEEETTT--------EEEEESCCBCHHHHH-
T ss_pred ------cHHHHHHHHhcCCCcccccc----------------cccccCcEEEEcce--------EEEecCccCChhhhc-
Confidence 11234567778999874211 12459999999998 999999999873221
Q ss_pred CcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCHHHHHHHHHHHHHHHhhcC
Q 008859 401 PEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATK 461 (551)
Q Consensus 401 ~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GPaa~dv~~~F~~rW~~~~~ 461 (551)
..|-++.+.-.+++|..+...|++.|+....
T Consensus 149 ------------------------------~n~E~~~~i~~~~~~~~~~~~F~~~W~~~~p 179 (196)
T 4ggj_A 149 ------------------------------NNRENVLIMEDTEYVRLFLEEFERIWEEFDP 179 (196)
T ss_dssp ------------------------------HCCEEEEEECCHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------------ccceeEEEEECHHHHHHHHHHHHHHHHhCCC
Confidence 1233444444456899999999999987544
No 33
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.66 E-value=1.1e-15 Score=137.87 Aligned_cols=104 Identities=29% Similarity=0.433 Sum_probs=87.7
Q ss_pred eeEEEEEEEEeecCCCCCCC-chhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC--ee
Q 008859 16 HGDLDLKIIRARRLPNMDMM-SEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--AT 92 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~--~~ 92 (551)
.+.|.|+|++|++|+++|.+ +. +||||+|.+.. ..
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~------------------------------------------~dpyv~v~~~~~~~~ 58 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMT------------------------------------------SDPYIKMTILPEKKH 58 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTB------------------------------------------CEEEEEEEEETTTCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCC------------------------------------------CCCEEEEEEecCCCc
Confidence 47899999999999998864 32 89999999953 45
Q ss_pred eEEeeecCCCCCCeEeeEEEEe-ecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccce-eeeEEEccC
Q 008859 93 VARTRVLKNSQEPVWNEHFNIP-LAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGEL-ISRWYDIIA 161 (551)
Q Consensus 93 v~rTrvi~ns~nP~WnE~F~i~-vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~-i~~w~~Ll~ 161 (551)
..||++++++.||+|||+|.|+ +... ...|.|+|||.+.++ +++||.+.|++.++..+.. ...|++|..
T Consensus 59 ~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 59 KVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred eEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 6899999999999999999996 6543 357999999999998 8999999999999987644 456788843
No 34
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.66 E-value=7.2e-16 Score=143.68 Aligned_cols=106 Identities=27% Similarity=0.449 Sum_probs=87.2
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----e
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~----~ 91 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+.+ .
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~DPyv~v~l~~~~~~~ 73 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGY------------------------------------------SDPFVKLWLKPDMGKK 73 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEETC---C
T ss_pred CCEEEEEEEEeECCCCccCCCC------------------------------------------CCcEEEEEEECCCCcc
Confidence 4899999999999999886543 89999999965 3
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCC
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGS 165 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gk 165 (551)
...||++++++.||+|||+|.|.+... ...|.|+|||.+.++ +++||.+.|++.++. +..+.|++|+...++
T Consensus 74 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~~~~~ 149 (166)
T 2cm5_A 74 AKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLKNKDK 149 (166)
T ss_dssp CEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHHCTTC
T ss_pred ceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHHhCCCC
Confidence 568999999999999999999998763 457999999999998 899999999998863 334455555544333
No 35
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.65 E-value=6.8e-16 Score=142.72 Aligned_cols=104 Identities=27% Similarity=0.446 Sum_probs=87.4
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----e
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~----~ 91 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+.. .
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~l~~~~~~~ 61 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGL------------------------------------------SDPYVKIHLMQNGKRL 61 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEEETTEEE
T ss_pred CCEEEEEEEEeeCCCCccCCCC------------------------------------------CCeEEEEEEEeCCcee
Confidence 5899999999999999886553 89999999953 2
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccc----------c--ccceeee
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTI----------A--TGELISR 155 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l----------~--~g~~i~~ 155 (551)
...||++++++.||+|||+|.|.+... ...|.|+|||.+.++ +++||.+.|++..+ . .+..+++
T Consensus 62 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~ 141 (159)
T 1tjx_A 62 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQ 141 (159)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEE
T ss_pred ceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeee
Confidence 468999999999999999999998765 356999999999998 89999999999853 2 3456778
Q ss_pred EEEccC
Q 008859 156 WYDIIA 161 (551)
Q Consensus 156 w~~Ll~ 161 (551)
|++|..
T Consensus 142 W~~L~~ 147 (159)
T 1tjx_A 142 WHTLQV 147 (159)
T ss_dssp EEECBC
T ss_pred EEECcC
Confidence 888843
No 36
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=3.6e-16 Score=142.58 Aligned_cols=109 Identities=26% Similarity=0.466 Sum_probs=88.5
Q ss_pred eeEEEEEEEEeecCCC-CCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC--ee
Q 008859 16 HGDLDLKIIRARRLPN-MDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--AT 92 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~--~~ 92 (551)
.|.|.|+|++|++|++ ||..+. + .....+||||+|.+.. ..
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~--~----------------------------------~~~~~~dpyv~v~l~~~~~~ 68 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGS--R----------------------------------QDMAHSNPYVKICLLPDQKN 68 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCS--S----------------------------------CTTCCCCCEEEEEEETCCSS
T ss_pred CCEEEEEEEEEeCCCCccccccc--c----------------------------------ccCCCCCcEEEEEEEeCCCc
Confidence 5799999999999998 343220 0 0011289999999953 34
Q ss_pred eEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEcc
Q 008859 93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDII 160 (551)
Q Consensus 93 v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll 160 (551)
..||++++++.||+|||+|.|.+... ...|.|+|||.+.++ +++||.+.|++.++..++....|++|.
T Consensus 69 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 69 SKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp CEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred ceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 67999999999999999999998753 357999999999998 789999999999998777778899884
No 37
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.61 E-value=6.9e-15 Score=149.67 Aligned_cols=124 Identities=24% Similarity=0.403 Sum_probs=100.7
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC--Ceee
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QATV 93 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~--~~~v 93 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+. +...
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dPyv~v~l~~~~~~~ 56 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGF------------------------------------------SDPYVKIYLLPDRKKK 56 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSC------------------------------------------CCEEEEEECTTSTTSC
T ss_pred CCEEEEEEEEeECCCCcCCCCC------------------------------------------cCeEEEEEEEcCCCee
Confidence 4899999999999999887553 8999999993 3456
Q ss_pred EEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEee-cccccc-cceeeeEEEccCCCCCCC
Q 008859 94 ARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIP-AHTIAT-GELISRWYDIIAPSGSPP 167 (551)
Q Consensus 94 ~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ip-l~~l~~-g~~i~~w~~Ll~~~gkp~ 167 (551)
.||++++++.||+|||+|.|.+... ...|.|+|+|.|.++ +++||.+.|+ +.++.. +.....|++|....++ .
T Consensus 57 ~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~-~ 135 (296)
T 1dqv_A 57 FQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSE-K 135 (296)
T ss_dssp EECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSC-C
T ss_pred EeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeecccccccc-c
Confidence 7999999999999999999998654 347999999999998 8999999996 444443 4456789999654433 2
Q ss_pred CCCceEEEEeeeecc
Q 008859 168 KPGASIQLELKFTPC 182 (551)
Q Consensus 168 k~~G~L~lsl~f~p~ 182 (551)
...|+|.+++.|.|.
T Consensus 136 ~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 136 ADLGELNFSLCYLPT 150 (296)
T ss_dssp SCCCEEEEEEEEETT
T ss_pred cccceEEEEEEeccc
Confidence 357999999998763
No 38
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.59 E-value=1.1e-14 Score=133.47 Aligned_cols=136 Identities=16% Similarity=0.253 Sum_probs=104.6
Q ss_pred cchHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCCCCccCccCCCCC
Q 008859 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTP 320 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~~~~~~ 320 (551)
...++.+.++|++|+++|+|+.|.+ + ...|.+.|.++++|||+|+||+ |...+...
T Consensus 13 ~~~~~~~~~~i~~A~~~I~i~~~~~---------~--------~~~i~~aL~~a~~rGV~Vril~-~~~~~~~~------ 68 (155)
T 1byr_A 13 GSARVLVLSAIDSAKTSIRMMAYSF---------T--------APDIMKALVAAKKRGVDVKIVI-DERGNTGR------ 68 (155)
T ss_dssp THHHHHHHHHHHHCSSEEEEEESSB---------C--------CHHHHHHHHHHHHTTCEEEEEE-ESTTCCSH------
T ss_pred CcHHHHHHHHHHHHhhEEEEEEEEe---------C--------CHHHHHHHHHHHHCCCEEEEEE-eCcccccc------
Confidence 3579999999999999999999854 1 1588999999999999999997 55433110
Q ss_pred CcccCCcHHHHhHhcCCCcEEEecCCCCcccccccccccccccccCccceEEEccCCCCCCcceEEEEceeeccccccCC
Q 008859 321 GVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDT 400 (551)
Q Consensus 321 g~~~t~~~~~~~~~~~~~v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dL~~~R~Dt 400 (551)
......+.|...|+++..... ....|+|++|||++ ++++||.|++...+
T Consensus 69 -----~~~~~~~~L~~~gv~v~~~~~----------------~~~~H~K~~iiD~~--------~~~iGS~N~~~~~~-- 117 (155)
T 1byr_A 69 -----ASIAAMNYIANSGIPLRTDSN----------------FPIQHDKVIIVDNV--------TVETGSFNFTKAAE-- 117 (155)
T ss_dssp -----HHHHHHHHHHHTTCCEEEECS----------------SSCCCCCEEEETTT--------EEEEESCCBSHHHH--
T ss_pred -----ccHHHHHHHHHCCCeEEEcCC----------------cccccceEEEECCC--------EEEEECCCCCcccc--
Confidence 123445667778998875321 12569999999998 99999999986211
Q ss_pred CcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCH--HHHHHHHHHHHHHHhhcC
Q 008859 401 PEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP--AAYDVLINFEQRWRKATK 461 (551)
Q Consensus 401 ~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GP--aa~dv~~~F~~rW~~~~~ 461 (551)
..|++..+.++|+ .+.++...|++.|+.+..
T Consensus 118 ------------------------------~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~~~ 150 (155)
T 1byr_A 118 ------------------------------TKNSENAVVIWNMPKLAESFLEHWQDRWNQGRD 150 (155)
T ss_dssp ------------------------------HTSCEEEEEEESCHHHHHHHHHHHHHHHHTCEE
T ss_pred ------------------------------ccCcccEEEEcCcHHHHHHHHHHHHHHHHhCCC
Confidence 2467899999993 899999999999987543
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=1.3e-14 Score=130.55 Aligned_cols=96 Identities=22% Similarity=0.383 Sum_probs=67.7
Q ss_pred CCcEEEEEECCeeeEEeeecC-CCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeecccccccc--eeee
Q 008859 80 SDPYVTVVVPQATVARTRVLK-NSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGE--LISR 155 (551)
Q Consensus 80 sDpYvtV~l~~~~v~rTrvi~-ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~--~i~~ 155 (551)
+||||+|.. + . .||++++ ++.||+|||+|.|.+......|.|+|||.| ++ +++||.+.||++++.... ....
T Consensus 23 ~DPYv~v~~-~-~-~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~ 98 (131)
T 2cjt_A 23 FNTYVTLKV-Q-N-VKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGE 98 (131)
T ss_dssp CEEEEEEEE-T-T-EEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEEEEEEEEEGGGSCBCSSCCCCE
T ss_pred cCeEEEEEe-c-C-EEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCeEEEEEEEHHHhhhcCCCCccc
Confidence 899999992 2 2 3676666 599999999999999988778999999999 65 899999999999986432 1223
Q ss_pred EEEc----cCCCCCCC----CCCceEEEEeee
Q 008859 156 WYDI----IAPSGSPP----KPGASIQLELKF 179 (551)
Q Consensus 156 w~~L----l~~~gkp~----k~~G~L~lsl~f 179 (551)
|.++ ...+|+.+ ...+.+.+.++|
T Consensus 99 ~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 99 WLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EEECBC----------CCSCCCCCEEEEEEEE
T ss_pred cEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 5544 32333321 224557777776
No 40
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.57 E-value=1.6e-14 Score=130.81 Aligned_cols=101 Identities=20% Similarity=0.272 Sum_probs=91.7
Q ss_pred CCcEEEEEECCeeeEEeeecC-CCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceee
Q 008859 80 SDPYVTVVVPQATVARTRVLK-NSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELIS 154 (551)
Q Consensus 80 sDpYvtV~l~~~~v~rTrvi~-ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~ 154 (551)
+|||++|.+.+.+ .+|++++ ++.||+|||.|.++++.+ .+.|+|.|+|.+.++ +.+||++.|||.++..+..++
T Consensus 37 ~Dp~akv~FRg~k-~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~ 115 (144)
T 3l9b_A 37 ADRIAKVTFRGQS-FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVE 115 (144)
T ss_dssp EEEEEEEEETTEE-EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEE
T ss_pred CCCeEEEEEeccc-eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhccCCeEE
Confidence 8999999998877 5999998 699999999999999886 456999999999998 899999999999999888888
Q ss_pred eEEEccCCCCCCCCCCceEEEEeeeeccC
Q 008859 155 RWYDIIAPSGSPPKPGASIQLELKFTPCD 183 (551)
Q Consensus 155 ~w~~Ll~~~gkp~k~~G~L~lsl~f~p~~ 183 (551)
.+.+|++.++++. .+.|.++|+|.|.+
T Consensus 116 l~~~LvD~n~~~~--~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 116 VSDTLIDDNNAII--KTSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEEECTTSCEE--EEEEEEEEEEEETT
T ss_pred EeecccCCCCCcc--ccEEEEEEEecCCC
Confidence 8999999999986 48999999999853
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.54 E-value=2.7e-14 Score=159.64 Aligned_cols=122 Identities=23% Similarity=0.433 Sum_probs=102.8
Q ss_pred EeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----
Q 008859 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (551)
Q Consensus 15 lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~---- 90 (551)
-.+.|.|+|++|++|+.++.... ..+||||+|.+.+
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~----------------------------------------~~~DPYV~V~l~g~~~d 534 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKN----------------------------------------SIVDPKVIVEIHGVGRD 534 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSS----------------------------------------SCCCEEEEEEEESSGGG
T ss_pred cceEEEEEEEEcCCCCccccccc----------------------------------------CCCCcEEEEEEecCCCC
Confidence 35789999999999998764100 1289999999955
Q ss_pred eeeEEeeecCCC-CCCeEeeEEEEeecCCC-CeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCCCC
Q 008859 91 ATVARTRVLKNS-QEPVWNEHFNIPLAHPL-SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPP 167 (551)
Q Consensus 91 ~~v~rTrvi~ns-~nP~WnE~F~i~vah~~-~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gkp~ 167 (551)
....||++++++ .||+|||+|.|.+..+. ..|.|+|||.|.++ +++||++.||+..|..|. +|++|.+..|++.
T Consensus 535 ~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~ 611 (624)
T 1djx_A 535 TGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQH 611 (624)
T ss_dssp CEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEE
T ss_pred cceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCC
Confidence 245799999997 99999999999998774 57999999999997 899999999999998874 6999999988875
Q ss_pred CCCceEEEEeeee
Q 008859 168 KPGASIQLELKFT 180 (551)
Q Consensus 168 k~~G~L~lsl~f~ 180 (551)
..+.|.|.++|.
T Consensus 612 -~~~~L~v~i~~~ 623 (624)
T 1djx_A 612 -PSATLFVKISIQ 623 (624)
T ss_dssp -EEEEEEEEEEEE
T ss_pred -CceEEEEEEEEE
Confidence 468899998875
No 42
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.54 E-value=4.1e-14 Score=154.07 Aligned_cols=115 Identities=21% Similarity=0.377 Sum_probs=98.8
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCeeeEE
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVAR 95 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~~v~r 95 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+.+.. .|
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~------------------------------------------sdpyv~v~~~~~~-~~ 422 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGK------------------------------------------SNPYCEISMGSQS-YT 422 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEETTEE-EE
T ss_pred CceEEEEeceeecCCCCCCCCC------------------------------------------CCeEEEEEECCee-cc
Confidence 4789999999999999887654 8999999997755 79
Q ss_pred eeecCCCCCCeEeeEEEEeecCCC-CeEEEEEEecCCCC-CceeEEEEeecccccccce----eeeEEEccCCCCCCCCC
Q 008859 96 TRVLKNSQEPVWNEHFNIPLAHPL-SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGEL----ISRWYDIIAPSGSPPKP 169 (551)
Q Consensus 96 Trvi~ns~nP~WnE~F~i~vah~~-~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~----i~~w~~Ll~~~gkp~k~ 169 (551)
|++++++.||+|||+|.|.+.... ..|.|+|||.|.++ +++||.+.+|+.++..+.. +..|+++.+. .
T Consensus 423 T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~ 496 (510)
T 3jzy_A 423 TRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------P 496 (510)
T ss_dssp CCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------S
T ss_pred CCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC------C
Confidence 999999999999999999987664 56999999999998 8999999999999987654 7889998432 4
Q ss_pred CceEEEEeee
Q 008859 170 GASIQLELKF 179 (551)
Q Consensus 170 ~G~L~lsl~f 179 (551)
.|+|+|++.+
T Consensus 497 ~G~i~l~~~l 506 (510)
T 3jzy_A 497 TGEVWVRFDL 506 (510)
T ss_dssp SCEEEEEEEE
T ss_pred CceEEEEEEE
Confidence 5888877765
No 43
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.53 E-value=7.8e-16 Score=167.43 Aligned_cols=127 Identities=24% Similarity=0.419 Sum_probs=26.0
Q ss_pred EEEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCee
Q 008859 13 IYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQAT 92 (551)
Q Consensus 13 ~~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~~ 92 (551)
....|.|.|+|++|++|+++ .||||++.+++..
T Consensus 7 ~r~~~~L~V~VieAk~L~~~-----------------------------------------------ddpYv~v~l~~~~ 39 (483)
T 3bxj_A 7 RRVDNVLKLWIIEARELPPK-----------------------------------------------KRYYCELCLDDML 39 (483)
T ss_dssp EEEEECC-------------------------------------------------------------------------
T ss_pred ceeccEEEEEEEEcCCcCCC-----------------------------------------------CCCeEEEEECCeE
Confidence 45679999999999999853 3799999999887
Q ss_pred eEEeeecCCC---CCCeEeeEEEEeecCCCCeEEEEEEec-C---CCC-CceeEEEEeecccccccceeeeEEEccCCCC
Q 008859 93 VARTRVLKNS---QEPVWNEHFNIPLAHPLSNLEIQVKDD-D---VFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSG 164 (551)
Q Consensus 93 v~rTrvi~ns---~nP~WnE~F~i~vah~~~~l~f~Vkd~-d---~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~g 164 (551)
.+||++++++ .||+|||+|.|.+.+....|+|+|||+ | .++ +++||.+.||++++..|...++||+|.+..+
T Consensus 40 ~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~ 119 (483)
T 3bxj_A 40 YARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTG 119 (483)
T ss_dssp -------------------CCEECC------------------------------------------CCEECC-------
T ss_pred EeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCC
Confidence 7899999998 999999999999877778899999994 4 244 8999999999999999889999999976543
Q ss_pred ---------------------CCCCCCceEEEEeeeeccCCCC
Q 008859 165 ---------------------SPPKPGASIQLELKFTPCDKNP 186 (551)
Q Consensus 165 ---------------------kp~k~~G~L~lsl~f~p~~~~~ 186 (551)
+..+..|.|+|+++|.+....|
T Consensus 120 ~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~vlP 162 (483)
T 3bxj_A 120 SGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMSILP 162 (483)
T ss_dssp -------------------------------CEEEEEECCBCC
T ss_pred ccccccccccccccccccccccCCCCCceEEEEEEeeeeeecc
Confidence 1223468999999998875444
No 44
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.53 E-value=1.2e-14 Score=141.32 Aligned_cols=151 Identities=14% Similarity=0.146 Sum_probs=105.8
Q ss_pred cchHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCCCCccCccCCCCC
Q 008859 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTP 320 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~~~~~~ 320 (551)
.++++.|.++|++|+++|+|+.|.| + ...|.++|+++|+|||+||||+ |...+...
T Consensus 57 ~~~~~~ii~~I~~A~~sI~i~~Y~~---------~--------~~~I~~aL~~Aa~RGV~VRii~-D~~~~~~~------ 112 (220)
T 4gel_A 57 LRNVAKIVEQIDRAVYSIDLAIYTF---------T--------SLFLADSIKRALQRGVIIRIIS-DGEMVYSK------ 112 (220)
T ss_dssp HHHHHHHHHHHHTCSSEEEEECSCB---------C--------CHHHHHHHHHHHHHTCEEEEEC-CTTTTTST------
T ss_pred HHHHHHHHHHHHHhhhEEEEEEEEe---------C--------CHHHHHHHHHHHHcCCeEEEEE-echhhhhh------
Confidence 5789999999999999999999864 1 2689999999999999999997 87654321
Q ss_pred CcccCCcHHHHhHhcCCCcEEEecCCCCc--ccccccccc--cccccccCccceEEEccCCCCCCcceEEEEceeecccc
Q 008859 321 GVMATHDEETKKFFKHSSVNCVLAPRYAS--SKLSYFKQQ--IVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDG 396 (551)
Q Consensus 321 g~~~t~~~~~~~~~~~~~v~~~l~p~~~~--~~~~~~~~~--~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dL~~~ 396 (551)
. .....+...++.+........ .+..++++. ..+...+.|.|++++|+. ++++||+|++..
T Consensus 113 ------~-~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~--------~v~~GS~N~t~~ 177 (220)
T 4gel_A 113 ------G-SQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYS--------IVISGSVNWTAL 177 (220)
T ss_dssp ------T-CHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCC--------EEEEESCCBSHH
T ss_pred ------H-HHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceeccccccc--------eEEecCcccccc
Confidence 0 112233345555443111100 011111111 122345778888888887 999999998762
Q ss_pred ccCCCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCHHHHHHHHHHHHHHHhhcC
Q 008859 397 RYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATK 461 (551)
Q Consensus 397 R~Dt~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GPaa~dv~~~F~~rW~~~~~ 461 (551)
-. ...|.|+.+...|++|..+...|++.|+....
T Consensus 178 s~-------------------------------~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~~ 211 (220)
T 4gel_A 178 GL-------------------------------GGNWENCIITADDKLTATFQAEFQRMWRAFAK 211 (220)
T ss_dssp HH-------------------------------HTSBEEEEEECCHHHHHHHHHHHHHHHHHSEE
T ss_pred cc-------------------------------ccCceEEEEEECHHHHHHHHHHHHHHHHhccC
Confidence 11 13688999999999999999999999997654
No 45
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=99.52 E-value=8e-15 Score=158.30 Aligned_cols=165 Identities=10% Similarity=0.062 Sum_probs=109.7
Q ss_pred ccCCeeEEEEeccccCCCCCceecCCCCCCCCcchHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHH
Q 008859 209 RKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLG 288 (551)
Q Consensus 209 r~g~~v~ly~d~~~~~~~~p~~~l~~G~~y~~~~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~ 288 (551)
..|+.|+++.+| .++|+.+.++|++|+++|+|++|+| .++. .+..|.
T Consensus 24 ~~~n~v~~l~~g--------------------~~~~~~l~~~I~~A~~~I~i~~~~~-------~~d~------~g~~l~ 70 (458)
T 3hsi_A 24 LQAEQIEFLGSS--------------------AEFKTQIIELIRNAKKRIYVTALYW-------QKDE------AGQEIL 70 (458)
T ss_dssp CCGGGEEECCCH--------------------HHHHHHHHHHHHTCSSEEEEEESCB-------CSSH------HHHHHH
T ss_pred ccCCeEEEEeCH--------------------HHHHHHHHHHHHhcCCEEEEEEEEE-------ecCc------HHHHHH
Confidence 358999999998 6889999999999999999999964 2222 247999
Q ss_pred HHHHHhhhc--CCeEEEEEeCCCCccCccCCCCCCcccCC-cHHHHhHhcCCC--cEEE--ecCCCCccccccccccccc
Q 008859 289 ELLKYKSEE--GVRVLLLVWDDKTSHDKLGVKTPGVMATH-DEETKKFFKHSS--VNCV--LAPRYASSKLSYFKQQIVG 361 (551)
Q Consensus 289 elL~~ka~~--GV~V~iLvwD~~~s~~~~~~~~~g~~~t~-~~~~~~~~~~~~--v~~~--l~p~~~~~~~~~~~~~~~~ 361 (551)
++|.+||++ ||+|+||+ |+..+... .-|..... +......|..+| |+|. ++. .|.. ...
T Consensus 71 ~aL~~aa~r~~GV~Vril~-D~~~~~r~----~~g~~~~~~~~~~~~~L~~~g~nv~v~~~~f~-~p~~--------~~~ 136 (458)
T 3hsi_A 71 DEIYRVKQENPHLDVKVLI-DWHRAQRN----LLGAEKSATNADWYCEQRQTYQLPDDPNMFFG-VPIN--------TRE 136 (458)
T ss_dssp HHHHHHHHHSTTCEEEEEE-ETTGGGSC----CC-----CCHHHHHHHHHHHHTCTTCCCCEEE-ECSS--------SSG
T ss_pred HHHHHHHhcCCCCEEEEEE-ECcccccc----ccccccccccHHHHHHHHhhCCCceEeeeecC-Cccc--------ccc
Confidence 999999999 99999997 87421110 00000000 123333343333 6655 431 1211 113
Q ss_pred ccccCccceEEEccCCCCCCcceEEEEceeeccccccCCCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEe
Q 008859 362 TIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLD 441 (551)
Q Consensus 362 ~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dL~~~R~Dt~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~ 441 (551)
.+.++|+|++|||++ + ++||+||.+.++.. ......|+|+. +.
T Consensus 137 ~~~r~H~Ki~viD~~--------v-~~~G~Ni~d~y~~~--------------------------~~~~~~drd~~--i~ 179 (458)
T 3hsi_A 137 VFGVLHVKGFVFDDT--------V-LYSGASINNVYLHQ--------------------------FEKYRYDRYQK--IT 179 (458)
T ss_dssp GGCCEECCEEEETTE--------E-EEESCCBSTTTTTC--------------------------SSCCEECCEEE--EE
T ss_pred ccCcceeeEEEECCC--------E-EEEeeecCHHHhcC--------------------------CcccCcchhhh--hc
Confidence 567899999999997 7 55669999944431 01123488844 89
Q ss_pred CHHHHHHHHHHH--HHHH
Q 008859 442 GPAAYDVLINFE--QRWR 457 (551)
Q Consensus 442 GPaa~dv~~~F~--~rW~ 457 (551)
||++.|....|. ..|+
T Consensus 180 g~~~~D~~~~~~~~~~~~ 197 (458)
T 3hsi_A 180 HAELADSMVNFINDYLLD 197 (458)
T ss_dssp CHHHHHHHHHHHHHTTCC
T ss_pred CchHHHHHHHHHHhhhhc
Confidence 999999999994 4464
No 46
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.50 E-value=1.1e-13 Score=151.86 Aligned_cols=106 Identities=21% Similarity=0.299 Sum_probs=91.1
Q ss_pred eEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCeeeEEe
Q 008859 17 GDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVART 96 (551)
Q Consensus 17 G~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~~v~rT 96 (551)
|.|.|+|++|++|+. |.++. +||||+|.+.+.. .||
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~------------------------------------------sDPYV~v~l~~~~-~kT 429 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTA------------------------------------------TDAYLKVFFGGQE-FRT 429 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSC------------------------------------------CCEEEEEEETTEE-EEC
T ss_pred cEEEEEEEEccCCCc-ccCCC------------------------------------------cCeEEEEEECCEe-eee
Confidence 789999999999998 87664 8999999999866 899
Q ss_pred eecCCCCCCeEeeEEEEeecC--CCCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCCCCCCCceE
Q 008859 97 RVLKNSQEPVWNEHFNIPLAH--PLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASI 173 (551)
Q Consensus 97 rvi~ns~nP~WnE~F~i~vah--~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gkp~k~~G~L 173 (551)
+|++++.||+|||+|.|.+.. ....|.|+|||.|.++ +++||.+.+++. .|. .+.|++| ..|.|
T Consensus 430 kvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~---~g~-~~~~~~l---------~~G~l 496 (540)
T 3nsj_A 430 GVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH---SGF-HEVTCEL---------NHGRV 496 (540)
T ss_dssp CCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC---SEE-EEEEEEC---------SSSEE
T ss_pred eeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee---CCc-EEEEEEc---------CCeEE
Confidence 999999999999999998643 5667999999999998 799999999987 354 6789987 34788
Q ss_pred EEEeee
Q 008859 174 QLELKF 179 (551)
Q Consensus 174 ~lsl~f 179 (551)
++++..
T Consensus 497 ~~~~~~ 502 (540)
T 3nsj_A 497 KFSYHA 502 (540)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887663
No 47
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.49 E-value=1.3e-13 Score=129.24 Aligned_cols=66 Identities=23% Similarity=0.417 Sum_probs=57.6
Q ss_pred CCcEEEEEECCeeeEEeeecC-CCCCCeEeeEEEEeecCCCCeEEEEEEecCCCC-CceeEEEEeecccccc
Q 008859 80 SDPYVTVVVPQATVARTRVLK-NSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIAT 149 (551)
Q Consensus 80 sDpYvtV~l~~~~v~rTrvi~-ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~ 149 (551)
+||||+|. .+ . .||++++ ++.||+|||+|.|.+......|.|+|||.| ++ +++||++.||++++..
T Consensus 32 ~DPYV~v~-~~-~-~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 32 FNTYVTLK-VQ-N-VESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp CEEEEEEE-ET-T-EEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEEEEEEEEEGGGSCB
T ss_pred CCeEEEEE-ec-c-eEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCceEEEEEEEHHHhcc
Confidence 89999999 22 2 4787776 599999999999999988788999999999 65 8999999999999864
No 48
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.47 E-value=2.2e-13 Score=137.15 Aligned_cols=104 Identities=26% Similarity=0.442 Sum_probs=86.2
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC--Ce--
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QA-- 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~--~~-- 91 (551)
.|.|.|+|++|++|+++|..+. +||||+|.+. +.
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~------------------------------------------~dpyv~v~~~~~~~~~ 186 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGL------------------------------------------SDPYVKIHLMQNGKRL 186 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEEETTEEE
T ss_pred CCceEEEEEEeECCCCcCCCCC------------------------------------------cCeEEEEEEEeCCcEe
Confidence 3689999999999999886553 8999999984 22
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeeccccc------------ccceeee
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIA------------TGELISR 155 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~------------~g~~i~~ 155 (551)
...||++++++.||+|||+|.|.+..+ ...|.|+|||.+.++ +++||.+.|++..+. .+..+.+
T Consensus 187 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~ 266 (284)
T 2r83_A 187 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQ 266 (284)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEE
T ss_pred eeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchhe
Confidence 467999999999999999999998765 246999999999998 899999999997642 2345677
Q ss_pred EEEccC
Q 008859 156 WYDIIA 161 (551)
Q Consensus 156 w~~Ll~ 161 (551)
|++|..
T Consensus 267 W~~L~~ 272 (284)
T 2r83_A 267 WHTLQV 272 (284)
T ss_dssp EEECBC
T ss_pred eeecCC
Confidence 888743
No 49
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.43 E-value=2.7e-13 Score=153.41 Aligned_cols=102 Identities=27% Similarity=0.472 Sum_probs=91.4
Q ss_pred eeEEEEEEEEeecCCC---CCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC--
Q 008859 16 HGDLDLKIIRARRLPN---MDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ-- 90 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~-- 90 (551)
.|.|.|+|++|++|++ +|..+. +||||+|.+.+
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~------------------------------------------sDPYV~V~l~~~~ 54 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDT------------------------------------------PDPYVELFISTTP 54 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCC------------------------------------------CCEEEEEECTTST
T ss_pred ccEEEEEEEEEECCCCccccCCCCC------------------------------------------cCeEEEEEEecCC
Confidence 4799999999999998 665443 89999999985
Q ss_pred eeeEEeeecCCCCCCeEeeEEEEeecCC-CCeEEEEEEecCCCCCceeEEEEeecccccccceeeeEEEc
Q 008859 91 ATVARTRVLKNSQEPVWNEHFNIPLAHP-LSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDI 159 (551)
Q Consensus 91 ~~v~rTrvi~ns~nP~WnE~F~i~vah~-~~~l~f~Vkd~d~~g~~lIG~v~Ipl~~l~~g~~i~~w~~L 159 (551)
....||+|++++.||+|||+|.|.+..+ ...|+|+|||.|.+++++||.+.|++.++..|...+.|++|
T Consensus 55 ~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L 124 (749)
T 1cjy_A 55 DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIF 124 (749)
T ss_dssp TCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEE
T ss_pred CCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEec
Confidence 3567999999999999999999999874 56799999999999999999999999999999889999999
No 50
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.43 E-value=4.1e-14 Score=143.91 Aligned_cols=111 Identities=28% Similarity=0.426 Sum_probs=92.6
Q ss_pred eEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC--C--ee
Q 008859 17 GDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--Q--AT 92 (551)
Q Consensus 17 G~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~--~--~~ 92 (551)
|.|.|+|++|++|+++|..+. +||||+|.+. + ..
T Consensus 152 ~~l~v~v~~a~~L~~~d~~g~------------------------------------------~Dpyv~v~l~~~~~~~~ 189 (296)
T 1dqv_A 152 GLLTVTIIKASNLKAMDLTGF------------------------------------------SDPYVKASLISEGRRLK 189 (296)
T ss_dssp TEEEEEEEEEESCCCCSSSSC------------------------------------------CCEEEEECCCTTCCTTS
T ss_pred ceeEEEEEEeecCCccCCCCC------------------------------------------CCcEEEEEEEeCCcCcc
Confidence 889999999999999987653 8999999995 2 24
Q ss_pred eEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCCCCCCC
Q 008859 93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPK 168 (551)
Q Consensus 93 v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gkp~k 168 (551)
..||++++++.||+|||+|.|.+... ...|.|+|||.+.+| +++||.+.|++..+.. ...+.|++++...+++..
T Consensus 190 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~-~~~~~W~~~~~~~~~~~~ 268 (296)
T 1dqv_A 190 KRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPRKPVE 268 (296)
T ss_dssp CEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSSSCSC
T ss_pred ceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc-hhHHHHHHHHhCCCCcee
Confidence 57999999999999999999998775 346999999999998 8999999999987643 245778888777777654
Q ss_pred CC
Q 008859 169 PG 170 (551)
Q Consensus 169 ~~ 170 (551)
..
T Consensus 269 ~w 270 (296)
T 1dqv_A 269 HW 270 (296)
T ss_dssp SC
T ss_pred Ee
Confidence 33
No 51
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.23 E-value=3.4e-11 Score=135.23 Aligned_cols=145 Identities=15% Similarity=0.151 Sum_probs=104.4
Q ss_pred cchHHHHHHHHHhccc-----eEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCCCCccCcc
Q 008859 241 GTCWEDICHAISEAHH-----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKL 315 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~-----~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~ 315 (551)
.+.|+.+.+.|++|++ +|+|+.|.+ . + +..+.++|+++|++||+|+||+ |..+....
T Consensus 346 ~~sf~~v~~~I~~A~~dp~v~~I~it~Y~~-------~-~--------d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~- 407 (687)
T 1xdp_A 346 YHTFEHVLELLRQASFDPSVLAIKINIYRV-------A-K--------DSRIIDSMIHAAHNGKKVTVVV-ELQARFDE- 407 (687)
T ss_dssp TBCTHHHHHHHHHHHHCTTEEEEEEEESSC-------C-T--------TCHHHHHHHHHHHTTCEEEEEE-CTTCSSTT-
T ss_pred hhhhhhHHHHHHHHhhCCcceEEEEEeeee-------c-C--------cHHHHHHHHHHHhcCCEEEEEE-CCCcccch-
Confidence 3568999999999997 999988843 1 1 2689999999999999999997 87652210
Q ss_pred CCCCCCcccCCcHHHHhHhcCCCcEEEecCCCCcccccccccccccccccCccceEEEccCCCCCCcceEEEEceeeccc
Q 008859 316 GVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCD 395 (551)
Q Consensus 316 ~~~~~g~~~t~~~~~~~~~~~~~v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dL~~ 395 (551)
. .+....+.|..+||++... .+ .++.|+|++|||++..+. -+-.+|+||.|+..
T Consensus 408 -~--------~n~~~~~~L~~aGV~V~~~--~~--------------~~k~H~Ki~VID~re~~~-i~~~a~iGS~N~d~ 461 (687)
T 1xdp_A 408 -E--------ANIHWAKRLTEAGVHVIFS--AP--------------GLKIHAKLFLISRKENGE-VVRYAHIGTGNFNE 461 (687)
T ss_dssp -T--------TTTTTTHHHHHHTCEEEEC--CT--------------TCEECCEEEEEEEEETTE-EEEEEEEESSCSCT
T ss_pred -h--------hHHHHHHHHHHCCCEEEEe--cC--------------CccccceEEEEEeccCCe-EEEEEEEeCCcCCc
Confidence 0 0113345567789998742 11 235799999999521000 00139999999876
Q ss_pred cccCCCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCH-HHHHHHHHHHHHHHhhcC
Q 008859 396 GRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQRWRKATK 461 (551)
Q Consensus 396 ~R~Dt~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GP-aa~dv~~~F~~rW~~~~~ 461 (551)
.- ..-|+|+++.++|| +|.++...|.+.|..+..
T Consensus 462 rs--------------------------------~~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s~~ 496 (687)
T 1xdp_A 462 KT--------------------------------ARLYTDYSLLTADARITNEVRRVFNFIENPYRP 496 (687)
T ss_dssp TG--------------------------------GGTEEEEEEEECCHHHHHHHHHHHHHHHCTTSC
T ss_pred ch--------------------------------hhhcceEEEEEeCHHHHHHHHHHHHHHHhhccc
Confidence 21 13589999999997 699999999999987544
No 52
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.19 E-value=5.5e-11 Score=134.26 Aligned_cols=107 Identities=22% Similarity=0.416 Sum_probs=91.3
Q ss_pred EEeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEEC----
Q 008859 14 YLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP---- 89 (551)
Q Consensus 14 ~lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~---- 89 (551)
+.++.|.|+|++|++|+++|..+. +||||++.+.
T Consensus 169 ~~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------sDPyvkv~l~p~~~ 206 (674)
T 3pfq_A 169 IDREVLIVVVRDAKNLVPMDPNGL------------------------------------------SDPYVKLKLIPDPK 206 (674)
T ss_dssp ECSSEEEEEEEEEESCCCCSTTSS------------------------------------------CCEEEEEEEESCSS
T ss_pred eccceeeeeeecccccCCCCcccc------------------------------------------cCcccccccccCcc
Confidence 346889999999999999987654 8999999982
Q ss_pred CeeeEEeeecCCCCCCeEeeEEEEeecCC--CCeEEEEEEecCCCC-CceeEEEEeecccccccceeeeEEEccCCC
Q 008859 90 QATVARTRVLKNSQEPVWNEHFNIPLAHP--LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPS 163 (551)
Q Consensus 90 ~~~v~rTrvi~ns~nP~WnE~F~i~vah~--~~~l~f~Vkd~d~~g-~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~ 163 (551)
.....||++++++.||.|||+|.|.+... ...|.|+|||.|.++ +++||.+.+++.++..+. .++|++++...
T Consensus 207 ~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~ 282 (674)
T 3pfq_A 207 SESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQE 282 (674)
T ss_dssp CCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCTT
T ss_pred ccccccccccccccCCCccceeeeecccCCccceeeeEEeecccccccccccccccchhhhccCC-cccceeecccc
Confidence 23457999999999999999999998654 346999999999998 899999999999998654 58999997653
No 53
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.17 E-value=7.6e-11 Score=135.00 Aligned_cols=113 Identities=22% Similarity=0.391 Sum_probs=92.7
Q ss_pred EeeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECC----
Q 008859 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (551)
Q Consensus 15 lhG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~---- 90 (551)
..|+|.|+|++|++|+++ .+||||+|.+.+
T Consensus 676 ~~~~L~V~Visa~~L~~~----------------------------------------------~~DPYV~V~l~g~p~d 709 (799)
T 2zkm_X 676 VATTLSITVISGQFLSER----------------------------------------------SVRTYVEVELFGLPGD 709 (799)
T ss_dssp TCEEEEEEEEEEESCCSS----------------------------------------------CCCEEEEEEEECCTTS
T ss_pred eeeeEEEEEEeccccCcc----------------------------------------------CCCcEEEEEEEecCCC
Confidence 368999999999999842 189999999943
Q ss_pred -eeeEEee-ecCC-CCCCeEee-EEEE-eecCC-CCeEEEEEEecCCCCCceeEEEEeecccccccceeeeEEEccCCCC
Q 008859 91 -ATVARTR-VLKN-SQEPVWNE-HFNI-PLAHP-LSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSG 164 (551)
Q Consensus 91 -~~v~rTr-vi~n-s~nP~WnE-~F~i-~vah~-~~~l~f~Vkd~d~~g~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~g 164 (551)
.+..||+ ++++ +.||+||| +|.| .+..+ ...|.|+|+|.+ +++||.+.||++.|..| .+|++|.+..|
T Consensus 710 ~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~~g 783 (799)
T 2zkm_X 710 PKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNSG---YHHLCLHSESN 783 (799)
T ss_dssp CCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCCE---EEEEEEECTTC
T ss_pred cccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC---CCccceEeeehhhcCCC---cEEEeccCCCC
Confidence 2346999 8875 69999999 6999 77655 457899999987 89999999999999887 46899998888
Q ss_pred CCCCCCceEEEEeeee
Q 008859 165 SPPKPGASIQLELKFT 180 (551)
Q Consensus 165 kp~k~~G~L~lsl~f~ 180 (551)
++. ..+.|.|.+++.
T Consensus 784 ~~~-~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 784 MPL-TMPALFIFLEMK 798 (799)
T ss_dssp CEE-EEEEEEEEEEEE
T ss_pred CCC-CceEEEEEEEEE
Confidence 866 357888888764
No 54
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.15 E-value=1.2e-10 Score=132.98 Aligned_cols=113 Identities=25% Similarity=0.412 Sum_probs=93.0
Q ss_pred eeEEEEEEEEeecCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEEEEECCe----
Q 008859 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQA---- 91 (551)
Q Consensus 16 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsDpYvtV~l~~~---- 91 (551)
.++|.|+|++|++|+.+ .+||||+|.+.+.
T Consensus 649 ~~~L~V~Visaq~L~~~----------------------------------------------~~DPYV~V~l~g~p~d~ 682 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----------------------------------------------QISSYVEVEMYGLPTDT 682 (816)
T ss_dssp CEEEEEEEEEEECCCSS----------------------------------------------CCCEEEEEEEESSGGGC
T ss_pred ceEEEEEEEEcccCCCC----------------------------------------------CCCCeEEEEEeCCCccc
Confidence 57899999999999842 1799999999651
Q ss_pred --eeEEeeecCC-CCCCeEeeE-EEEe-ecCC-CCeEEEEEEecCCCCCceeEEEEeecccccccceeeeEEEccCCCCC
Q 008859 92 --TVARTRVLKN-SQEPVWNEH-FNIP-LAHP-LSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGS 165 (551)
Q Consensus 92 --~v~rTrvi~n-s~nP~WnE~-F~i~-vah~-~~~l~f~Vkd~d~~g~~lIG~v~Ipl~~l~~g~~i~~w~~Ll~~~gk 165 (551)
...||+++++ +.||+|||+ |.|. +..+ ...|.|+|+|.+ +++||++.||++.|..| -++++|.+..|+
T Consensus 683 ~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~ 756 (816)
T 3qr0_A 683 VRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKPG---YRHVPLRNESNR 756 (816)
T ss_dssp EEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCCCE---EEEEEEECTTSC
T ss_pred ccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcCCc---ceEEEEeCCCCC
Confidence 4469999986 699999998 9998 6555 357899999985 79999999999999988 458999999988
Q ss_pred CCCCCceEEEEeeeec
Q 008859 166 PPKPGASIQLELKFTP 181 (551)
Q Consensus 166 p~k~~G~L~lsl~f~p 181 (551)
+. ..+.|.|.+.+..
T Consensus 757 ~~-~~atLfv~i~~~~ 771 (816)
T 3qr0_A 757 PL-GLASVFAHIVAKD 771 (816)
T ss_dssp EE-EEEEEEEEEEEEE
T ss_pred CC-CceEEEEEEEEEe
Confidence 76 3477887777654
No 55
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.14 E-value=9.1e-11 Score=134.81 Aligned_cols=95 Identities=23% Similarity=0.409 Sum_probs=78.5
Q ss_pred CCcEEEEEECC-----eeeEEeeecCC-CCCCeEee-EEEEe-ecCC-CCeEEEEEEecCCCCCceeEEEEeeccccccc
Q 008859 80 SDPYVTVVVPQ-----ATVARTRVLKN-SQEPVWNE-HFNIP-LAHP-LSNLEIQVKDDDVFGAQIIGTAAIPAHTIATG 150 (551)
Q Consensus 80 sDpYvtV~l~~-----~~v~rTrvi~n-s~nP~WnE-~F~i~-vah~-~~~l~f~Vkd~d~~g~~lIG~v~Ipl~~l~~g 150 (551)
+||||+|.+.+ ....||+|+++ +.||+||| +|.|. |..+ ...|.|+|+|.| +++||++.|||..|..|
T Consensus 742 ~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~G 818 (885)
T 3ohm_B 742 VGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRSG 818 (885)
T ss_dssp CCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCCE
T ss_pred CCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCCC
Confidence 79999999965 23469999976 69999999 69998 6544 457999999987 89999999999999988
Q ss_pred ceeeeEEEccCCCCCCCCCCceEEEEeeeec
Q 008859 151 ELISRWYDIIAPSGSPPKPGASIQLELKFTP 181 (551)
Q Consensus 151 ~~i~~w~~Ll~~~gkp~k~~G~L~lsl~f~p 181 (551)
-++++|.+..|++. ..+.|.|.+.+..
T Consensus 819 ---yR~vpL~~~~g~~l-~~atLfv~i~~~~ 845 (885)
T 3ohm_B 819 ---YHYVCLRNEANQPL-CLPALLIYTEASD 845 (885)
T ss_dssp ---EEEEEEECTTSCEE-EEEEEEEEEEEEE
T ss_pred ---ceEEEecCCCCCcc-CceEEEEEEEEEe
Confidence 45799999988865 4578888888764
No 56
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.05 E-value=1.8e-09 Score=96.45 Aligned_cols=91 Identities=19% Similarity=0.389 Sum_probs=77.8
Q ss_pred CCcEEEEEECCeee---EEe-eecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCCCceeEEEEeeccccc-----cc
Q 008859 80 SDPYVTVVVPQATV---ART-RVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIA-----TG 150 (551)
Q Consensus 80 sDpYvtV~l~~~~v---~rT-rvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g~~lIG~v~Ipl~~l~-----~g 150 (551)
.||||.|.++.... ++| ...+.+..|.|||.|.-.+. ....|+|.|+++.. ++|..++|++++|+ .+
T Consensus 32 lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~~ 107 (138)
T 2enj_A 32 VNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIVKGKNV---DLISETTVELYSLAERCRKNN 107 (138)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEEECSSC---SCCEEEEEESHHHHHHHHHTT
T ss_pred CCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCC
Confidence 79999999998766 899 66666999999999999875 45589999997765 99999999999998 34
Q ss_pred ceeeeEEEccCCCCCCCCCCceEEEEeeeecc
Q 008859 151 ELISRWYDIIAPSGSPPKPGASIQLELKFTPC 182 (551)
Q Consensus 151 ~~i~~w~~Ll~~~gkp~k~~G~L~lsl~f~p~ 182 (551)
...+.|++| ++.|+|++.++|.-.
T Consensus 108 g~~e~WvdL--------eP~Gkl~v~i~~~~e 131 (138)
T 2enj_A 108 GKTEIWLEL--------KPQGRMLMNARYFLE 131 (138)
T ss_dssp TCEEEEEEC--------BSSCEEEEEEEECCC
T ss_pred CceEEEEec--------ccCcEEEEEEEEEEe
Confidence 578899999 467999999999643
No 57
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.98 E-value=6.6e-09 Score=91.57 Aligned_cols=89 Identities=16% Similarity=0.349 Sum_probs=76.3
Q ss_pred CCcEEEEEECCeeeE---Ee-eecCCCCCCeEeeEEEEeecCCCCeEEEEEEecCCCCCceeEEEEeeccccc-----cc
Q 008859 80 SDPYVTVVVPQATVA---RT-RVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIA-----TG 150 (551)
Q Consensus 80 sDpYvtV~l~~~~v~---rT-rvi~ns~nP~WnE~F~i~vah~~~~l~f~Vkd~d~~g~~lIG~v~Ipl~~l~-----~g 150 (551)
.||||.|.++....+ +| ...+.+..|.|||.|.-.+. ....|+|.|+++.. ++|..++|++++|+ .+
T Consensus 27 lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~~ 102 (126)
T 1yrk_A 27 NQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKNN 102 (126)
T ss_dssp CCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTTT
T ss_pred CCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCC
Confidence 899999999887655 88 55666999999999999975 45589999998766 99999999999998 34
Q ss_pred ceeeeEEEccCCCCCCCCCCceEEEEeeee
Q 008859 151 ELISRWYDIIAPSGSPPKPGASIQLELKFT 180 (551)
Q Consensus 151 ~~i~~w~~Ll~~~gkp~k~~G~L~lsl~f~ 180 (551)
...+.|++| ++.|+|++.++|+
T Consensus 103 g~~e~WvdL--------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 103 GKAEFWLDL--------QPQAKVLMSVQYF 124 (126)
T ss_dssp TEEEEEEEC--------BSSCEEEEEEEEE
T ss_pred CceEEEEec--------ccCcEEEEEEEEe
Confidence 578899999 4679999999986
No 58
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=98.90 E-value=1e-08 Score=114.86 Aligned_cols=142 Identities=13% Similarity=0.128 Sum_probs=97.4
Q ss_pred cchHHHHHHHHHhccc-----eEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCCCCccCcc
Q 008859 241 GTCWEDICHAISEAHH-----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKL 315 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~-----~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~ 315 (551)
.+.|+.+.++|++|++ +|.++.|.+. .+..+.++|.+||++||+|++|| | .++...
T Consensus 351 ~~sf~~vi~~I~~A~~DP~V~sIk~tlYr~~----------------~ds~Iv~ALi~AA~rGv~V~vLv-e-l~arfd- 411 (705)
T 2o8r_A 351 YYTYDYVVRLLMEAAISPDVSEIRLTQYRVA----------------ENSSIISALEAAAQSGKKVSVFV-E-LKARFD- 411 (705)
T ss_dssp TBCSHHHHHHHHHHHTCTTEEEEEEEESCCC----------------SCCHHHHHHHHHHHTTCEEEEEE-C-CCSCC--
T ss_pred hHhHHHHHHHHHHhccCCCceEEEEEEEEEc----------------CCHHHHHHHHHHHHCCCEEEEEE-e-CCCCcc-
Confidence 4679999999999999 9999999541 13699999999999999999998 7 544320
Q ss_pred CCCCCCcccCCcHHHHhHhcCCCcEEEecCCCCcccccccccccccccccCccceEEEccC--CCCCCcceEEEEceeec
Q 008859 316 GVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQ--ASGNNRKITAFIGGIDL 393 (551)
Q Consensus 316 ~~~~~g~~~t~~~~~~~~~~~~~v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~--~~~~~~~~vafvGG~dL 393 (551)
...+....+.|+.+||+|+.. . ..+++|+|++|||++ -.|.-++ .+++|.-|+
T Consensus 412 --------ee~ni~wa~~Le~aGv~Vv~g--~--------------~~lk~H~Ki~lIdrr~~~~g~~~~-y~~igtGN~ 466 (705)
T 2o8r_A 412 --------EENNLRLSERMRRSGIRIVYS--M--------------PGLKVHAKTALILYHTPAGERPQG-IALLSTGNF 466 (705)
T ss_dssp -----------CHHHHHHHHHHTCEEEEC--C--------------TTCCBCCCEEEEEECCCSSSCCCE-EEEEESSCS
T ss_pred --------hhhhHHHHHHHHHCCCEEEEc--c--------------CCCCceeEEEEEecccccCCceeE-EEeccccce
Confidence 011345677788999998741 1 246889999999986 2221111 222221111
Q ss_pred cccccCCCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCH-HHHHHHHHHHHHHHh
Q 008859 394 CDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQRWRK 458 (551)
Q Consensus 394 ~~~R~Dt~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GP-aa~dv~~~F~~rW~~ 458 (551)
.+ ....-|.|+++...+| ++.|+...|..-|..
T Consensus 467 n~--------------------------------~tariy~D~~l~t~~~~i~~dl~~vF~~~tg~ 500 (705)
T 2o8r_A 467 NE--------------------------------TTARIYSDTTLMTANTDIVHDVYRLFRILDGD 500 (705)
T ss_dssp SC--------------------------------CCSSCEEEEEEEECCHHHHHHHHHHHHHHTTC
T ss_pred ee--------------------------------eEEEEEeeeeeeecChHHHHHHHHHHHHHhCC
Confidence 11 0012477888888876 669999999888753
No 59
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=98.69 E-value=6e-08 Score=104.57 Aligned_cols=149 Identities=18% Similarity=0.069 Sum_probs=98.2
Q ss_pred cchHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCCCCccCccCCCCC
Q 008859 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTP 320 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~~~~~~ 320 (551)
..+...+.++|.+|+++|+|++. |++ + +..+.++|+.++++||+|+||+ +...+...+.....
T Consensus 257 ~~i~~~~~~lI~~A~~~I~I~tp------Yf~--p--------~~~~~~aL~~Aa~rGV~VrIi~-~~~~and~y~~~~~ 319 (458)
T 3hsi_A 257 NELNQVIEDLFLQVQKKLVICTP------YFN--F--------PRTLQHKIATLLENGKRVEIIV-GDKVANDFYIPPEQ 319 (458)
T ss_dssp CHHHHHHHHHHHTCSSEEEEECS------SSC--C--------CHHHHHHHHHHHTTTCEEEEEE-ECGGGSTTCCCTTS
T ss_pred hHHHHHHHHHHHhcccEEEEEEe------ccC--C--------CHHHHHHHHHHHHCCCeEEEEE-CCccccCCccCCcc
Confidence 56888999999999999999975 234 2 2689999999999999999998 77643221100000
Q ss_pred C--cccCCcH--HH--H------hHhcCCC-cEEEecCCCCcccccccccccccccccCccceEEEccCCCCCCcceEEE
Q 008859 321 G--VMATHDE--ET--K------KFFKHSS-VNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAF 387 (551)
Q Consensus 321 g--~~~t~~~--~~--~------~~~~~~~-v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vaf 387 (551)
. .++.... +. + ..+..+| +.+.+.. +. ....|.|++|||++ +++
T Consensus 320 ~~~~~~~~~~lye~~~~~f~~~~~~l~~~G~i~V~i~~-~~--------------~~~lHaK~~vvD~~--------~~~ 376 (458)
T 3hsi_A 320 PFKMAGALPYLYESNLRRFCEKFETQIESGQLVVRLWR-DG--------------DNTYHLKGVWVDDR--------YIL 376 (458)
T ss_dssp CCCGGGGHHHHHHHHHHHHHHHTHHHHHHTSEEEEEEC-BT--------------TBEECCCEEEETTT--------EEE
T ss_pred hhhhhcchHHHHHHhhhhhHHHHHHHHhCCCeEEEEEe-cC--------------CCceeEEEEEECCe--------EEE
Confidence 0 0111000 00 1 1122345 3333211 11 12459999999998 999
Q ss_pred EceeeccccccCCCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCH---HHHHHHHHHHHHHHhhcC
Q 008859 388 IGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP---AAYDVLINFEQRWRKATK 461 (551)
Q Consensus 388 vGG~dL~~~R~Dt~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GP---aa~dv~~~F~~rW~~~~~ 461 (551)
||+.|+...-+.- + ..+.+.|.+| .+.++...|++.|..+..
T Consensus 377 vGS~N~d~RS~~l---------------N-----------------~E~~~~i~~~~~~l~~~l~~~f~~~~~~s~~ 421 (458)
T 3hsi_A 377 LTGNNLNPRAWRL---------------D-----------------AENGLLIYDPQQQLLAQVEKEQNQIRQHTKV 421 (458)
T ss_dssp EECCCCSHHHHHT---------------C-----------------EEEEEEEECTTCSSHHHHHHHHHHHHTTEEE
T ss_pred ecCCCCCcchhhh---------------C-----------------ceeEEEEeCCcHHHHHHHHHHHHHHHHhCeE
Confidence 9999997622210 1 3788889888 799999999999987554
No 60
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.43 E-value=1.3e-06 Score=95.15 Aligned_cols=161 Identities=18% Similarity=0.205 Sum_probs=91.1
Q ss_pred chHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCCCCccCccCCCCCC
Q 008859 242 TCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPG 321 (551)
Q Consensus 242 ~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~~~~~~g 321 (551)
.....+.++|.+||++|||+.-.|++ |++ |.. . .+..+.++|+.+++|||+|+||+ +..............
T Consensus 314 ~~~~~~~~~I~~A~~~I~I~tq~~~p--yf~--p~~-~---~~~~i~~aL~~Aa~rGV~VrIl~-~~~~~~~~~~~a~~~ 384 (506)
T 1v0w_A 314 PEESALRALVASAKGHIEISQQDLNA--TCP--PLP-R---YDIRLYDALAAKMAAGVKVRIVV-SDPANRGAVGSGGYS 384 (506)
T ss_dssp HHHHHHHHHHHTCSSEEEEEESCSSC--CTT--TSC-S---CCHHHHHHHHHHHHTTCEEEEEE-CCGGGCC------CC
T ss_pred cHHHHHHHHHhCcCcEEEEEeccccc--ccc--Ccc-c---chHHHHHHHHHHHhCCCcEEEEe-CCCCchHHHHHhHHH
Confidence 47889999999999999999622211 122 210 0 13689999999999999999998 654311100000000
Q ss_pred cccCCcHH-----HHhHhcCC-----------CcEEEecCCCCcccccccccccccccccCccceEEEccCCCCCCcceE
Q 008859 322 VMATHDEE-----TKKFFKHS-----------SVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKIT 385 (551)
Q Consensus 322 ~~~t~~~~-----~~~~~~~~-----------~v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~v 385 (551)
.+...-+. ..-.+-.. ++++.-....+. ..+ ..+.....|.|++|||++ +
T Consensus 385 ~~~~L~~~~~~l~~gv~ll~~g~~e~~~~~~~~l~i~~~~~~~~--~~~----~~~~~~~lHaK~~vvD~~--------~ 450 (506)
T 1v0w_A 385 QIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPN--GKW----ADGHPYAQHHKLVSVDSS--------T 450 (506)
T ss_dssp CCSCTHHHHHHHHHHHHHHHTSHHHHHHHHHHHEEEEECCSSSS--SSC----TTSCCCCBCCEEEEETTT--------E
T ss_pred HHHHHHHhhhhhcccchhcccccchhccccccceeeeeccccCc--ccc----ccCccccceEEEEEECCc--------E
Confidence 00000000 00000001 123210000000 000 000123569999999998 9
Q ss_pred EEEceeeccccccCCCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCH-HHHHHHHHHHHH-HHhhc
Q 008859 386 AFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQR-WRKAT 460 (551)
Q Consensus 386 afvGG~dL~~~R~Dt~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GP-aa~dv~~~F~~r-W~~~~ 460 (551)
++||+.|+.. |. ++.+.+.|++| .|.++...|.+. |+...
T Consensus 451 ~~vGS~N~d~-rS----------------------------------~~E~~l~i~~~~~a~~l~~~f~~~~w~~s~ 492 (506)
T 1v0w_A 451 FYIGSKNLYP-SW----------------------------------LQDFGYIVESPEAAKQLDAKLLDPQWKYSQ 492 (506)
T ss_dssp EEEESCCSSC-CC----------------------------------SBCEEEEEECHHHHHHHHHHTHHHHHHHHG
T ss_pred EEEeCCCCCC-cc----------------------------------hhhceeEecCHHHHHHHHHHHHHHHHhhcc
Confidence 9999999954 21 24788999998 688999999975 87544
No 61
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=97.13 E-value=0.0011 Score=74.32 Aligned_cols=139 Identities=16% Similarity=0.170 Sum_probs=93.8
Q ss_pred cCCCCCCCCcchHHHHHHHHHhccc----eEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeC
Q 008859 232 LDGGKLYKPGTCWEDICHAISEAHH----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWD 307 (551)
Q Consensus 232 l~~G~~y~~~~~~~~l~~aI~~A~~----~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD 307 (551)
|.-|+....+.+.+.+..+|..|++ +|+|..-.+ + +..+.++|.++|++||+|+|+| .
T Consensus 509 l~~sP~~~~~~i~~~i~~eI~~Ak~G~~a~I~ik~n~l---------~--------D~~ii~aL~~As~~GV~V~LIV-R 570 (705)
T 2o8r_A 509 LLVARYNMGEAITNLIEREIENVKRGKRGYMLLKMNGL---------Q--------DKNVITQLYRASEAGVEIDLIV-R 570 (705)
T ss_dssp CEETTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEESCB---------C--------CHHHHHHHHHHHHTTCEEEEEE-S
T ss_pred EEECCchHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCC---------C--------CHHHHHHHHHHHHCCCeEEEEE-c
Confidence 3337666667788889999999998 999987532 2 3699999999999999999998 4
Q ss_pred CCCccCccCCCCCCcccCCcHHHHhHhcCCCcEEEecCCCCcccccccccccccccccCccceEEE---ccCCCCCCcce
Q 008859 308 DKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLV---DTQASGNNRKI 384 (551)
Q Consensus 308 ~~~s~~~~~~~~~g~~~t~~~~~~~~~~~~~v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVV---D~~~~~~~~~~ 384 (551)
+.-+.. .|+ . ...++.|. +++ +-+.. |-|+.+. |+.
T Consensus 571 GiC~L~------Pgv---------~--~sdni~V~----------Siv-----gr~Le-h~RIy~f~~gd~~-------- 609 (705)
T 2o8r_A 571 GICCLV------PDM---------P--QSRNIRVT----------RLV-----DMYLE-HSRIWCFHNGGKE-------- 609 (705)
T ss_dssp SCBCSC------CSS---------G--GGTTEEEE----------ECC-----SSSEE-CCCEEEECGGGSC--------
T ss_pred cccccC------CCC---------C--CCCCeEEE----------eeH-----HHHHh-cCEEEEEECCCCc--------
Confidence 432221 111 0 01233332 111 11223 5588888 444
Q ss_pred EEEEceeeccccccCCCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCH-HHHHHHHHHHHHHHhhcC
Q 008859 385 TAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQRWRKATK 461 (551)
Q Consensus 385 vafvGG~dL~~~R~Dt~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GP-aa~dv~~~F~~rW~~~~~ 461 (551)
.+|+|+.|+...-++- . .-+.+-|..| .+..|...|+..|....+
T Consensus 610 ~~~IGSAn~m~Rnl~~---------------r-----------------~Ev~~~i~d~~~~~~l~~i~~~~l~d~~~ 655 (705)
T 2o8r_A 610 EVFISSADWMKRNLYN---------------R-----------------IETACPVLDPTLRREIIDILEIQLRDNIK 655 (705)
T ss_dssp EEEEESCCBCHHHHHT---------------S-----------------BCEEEECCSHHHHHHHHHHHHHHHHCCSS
T ss_pred EEEEeccccchhhhhh---------------e-----------------eEEEEEEcCHHHHHHHHHHHHHhhhhhhc
Confidence 9999999997633331 0 2567777777 677888899999987655
No 62
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=96.79 E-value=0.0039 Score=70.09 Aligned_cols=131 Identities=19% Similarity=0.207 Sum_probs=81.1
Q ss_pred HHHHHHHHHhccc----eEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCCCCccCccCCCC
Q 008859 244 WEDICHAISEAHH----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKT 319 (551)
Q Consensus 244 ~~~l~~aI~~A~~----~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~~~~~ 319 (551)
.+.+..+|..|++ +|+|....+ + +..+.++|.++|++||+|+||| +..-+..
T Consensus 514 ~~~I~~ei~~A~~g~~~~I~i~~~~l---------p--------D~~ii~AL~~Aa~rGV~VrLiv-rg~c~l~------ 569 (687)
T 1xdp_A 514 YEMVDREIANAQQGLPSGITLKLNNL---------V--------DKGLVDRLYAASSSGVPVNLLV-RGMCSLI------ 569 (687)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEESCB---------C--------CHHHHHHHHHHHHTTCCEEEEE-SSCBCBC------
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCCC---------C--------CHHHHHHHHHHHHCCCEEEEEE-ecccccC------
Confidence 3444555666886 799987732 2 2689999999999999999998 5432211
Q ss_pred CCcccCCcHHHHhHhcCCCcEEEecCCCCcccccccccccccccccCccceEEEccCCCCCCcceEEEEceeeccccccC
Q 008859 320 PGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYD 399 (551)
Q Consensus 320 ~g~~~t~~~~~~~~~~~~~v~~~l~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dL~~~R~D 399 (551)
.|+.+. ..++.|. +++ +.+.. |-|+....+. +.-.+|+|+.|+...-++
T Consensus 570 pgvp~~----------sdni~V~----------s~~-----~r~Le-h~rI~~f~~~-----dd~~~~IGSAN~d~Rsl~ 618 (687)
T 1xdp_A 570 PNLEGI----------SDNIRAI----------SIV-----DRYLE-HDRVYIFENG-----GDKKVYLSSADWMTRNID 618 (687)
T ss_dssp TTCTTT----------STTEEEE----------EEC-----SSSEE-CCCEEEECGG-----GSCEEEEESCCBSHHHHH
T ss_pred CCCCCC----------CCCEEEE----------Eeh-----hHHhh-CCeEEEEcCC-----CCCEEEEEcCccchhhhh
Confidence 111111 1233332 111 11122 5688888432 112999999999763332
Q ss_pred CCcccccccccccccCCCCCCCCCCCCCCCCCCeeEeeEEEeCH-HHHHHHHHHHHHHHhhcC
Q 008859 400 TPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQRWRKATK 461 (551)
Q Consensus 400 t~~H~l~~~l~~~~~~d~~~~~~~~~~~~~r~pWhD~h~~i~GP-aa~dv~~~F~~rW~~~~~ 461 (551)
. =.-+.+-|..| .+..+...|+..|+...+
T Consensus 619 ~--------------------------------n~Ev~~~I~d~~~~~~l~~~f~~~l~d~~~ 649 (687)
T 1xdp_A 619 Y--------------------------------RIEVATPLLDPRLKQRVLDIIDILFSDTVK 649 (687)
T ss_dssp S--------------------------------EEEEEEECCSHHHHHHHHHHHHHHHTCCSS
T ss_pred h--------------------------------heeeeEEecCHHHHHHHHHHHHHhhccccc
Confidence 1 13566777775 677888899999986544
No 63
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=93.26 E-value=0.092 Score=51.22 Aligned_cols=51 Identities=24% Similarity=0.067 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEEeCC
Q 008859 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDD 308 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLvwD~ 308 (551)
+...+.+.+.|++|++.|++..|. + .-..|.+.|+++++|||.|+|+++..
T Consensus 9 e~Ii~r~~e~I~~A~~el~lsi~~-----------e------~l~~l~~~L~~A~~rGV~V~liv~~~ 59 (233)
T 2f5t_X 9 DEAIEMFRESLYSAKNEVIVVTPS-----------E------FFETIREDLIKTLERGVTVSLYIDKI 59 (233)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECG-----------G------GHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHHhhhEEEEEeCH-----------H------HHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 457788999999999999998872 1 13689999999999999999999653
No 64
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=92.17 E-value=0.29 Score=50.29 Aligned_cols=48 Identities=25% Similarity=0.130 Sum_probs=40.1
Q ss_pred cchHHHHHHHHHhccceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEE
Q 008859 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLV 305 (551)
Q Consensus 241 ~~~~~~l~~aI~~A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLv 305 (551)
+...+.+.+.|.+|+++|++..|. . .-..+.+.|+++++|||+|++++
T Consensus 118 ~~I~~ri~eli~~A~~eI~i~~~~-----------~------~l~~l~~~L~~a~~RGV~Vrvi~ 165 (342)
T 3qph_A 118 DEAIEMFRESLYSAKNEVIVVTPS-----------E------FFETIREDLIKTLERGVTVSLYI 165 (342)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECH-----------H------HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhhheEEEEEeCH-----------H------HHHHHHHHHHHHHhCCCEEEEEE
Confidence 457888999999999999999872 0 02477889999999999999997
No 65
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=88.35 E-value=4.3 Score=38.94 Aligned_cols=39 Identities=13% Similarity=0.328 Sum_probs=32.4
Q ss_pred eeEEeeecCCCCCCeEeeEEEEeecCC---CCeEEEEEEecC
Q 008859 92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDD 130 (551)
Q Consensus 92 ~v~rTrvi~ns~nP~WnE~F~i~vah~---~~~l~f~Vkd~d 130 (551)
..++|.|.-.+.+|.|+|++.+.++.. ...|.|+++...
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S 118 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRS 118 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEec
Confidence 557888888899999999999998875 467999998654
No 66
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=83.54 E-value=5 Score=36.45 Aligned_cols=98 Identities=12% Similarity=0.123 Sum_probs=68.7
Q ss_pred cEEEEEECCeeeEEeeecCCCCCCeEeeEEEEeecCC--------CCeEEEEEEecCCCCCceeEEEEeecccccc-cce
Q 008859 82 PYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHP--------LSNLEIQVKDDDVFGAQIIGTAAIPAHTIAT-GEL 152 (551)
Q Consensus 82 pYvtV~l~~~~v~rTrvi~ns~nP~WnE~F~i~vah~--------~~~l~f~Vkd~d~~g~~lIG~v~Ipl~~l~~-g~~ 152 (551)
.||++++-.-...-|-++. +.+|.+|-+-.+.|... ...+.+++.......-..||++.|++.+++. .+.
T Consensus 44 tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~lLe~~~~ 122 (156)
T 2yrb_A 44 TFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKSGR 122 (156)
T ss_dssp EEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHHCCSC
T ss_pred EEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHhhCcCCc
Confidence 4666666554445676665 78899998877777554 2457777776543225799999999999984 455
Q ss_pred eeeEEEccCCCCCCCCCCceEEEEeeeec
Q 008859 153 ISRWYDIIAPSGSPPKPGASIQLELKFTP 181 (551)
Q Consensus 153 i~~w~~Ll~~~gkp~k~~G~L~lsl~f~p 181 (551)
+.+-.+|.+..|.. ..-|.|.+.|++..
T Consensus 123 i~g~~~L~g~~g~~-~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 123 IFCTASLIGTKGDI-PNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEECBSSSCC-TTSEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCCc-ceEEEEEEEEEEec
Confidence 88888998877742 24688888888743
No 67
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=74.59 E-value=14 Score=42.76 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=45.3
Q ss_pred CCcEEEEEE--CCeee---EEeeecCCCCCCeEeeEEEEeecCC----CCeEEEEEEecCCC--C-----------Ccee
Q 008859 80 SDPYVTVVV--PQATV---ARTRVLKNSQEPVWNEHFNIPLAHP----LSNLEIQVKDDDVF--G-----------AQII 137 (551)
Q Consensus 80 sDpYvtV~l--~~~~v---~rTrvi~ns~nP~WnE~F~i~vah~----~~~l~f~Vkd~d~~--g-----------~~lI 137 (551)
++.||++.+ ++... -.|..+.-..+|.|||.+.|++.-. .+.|.|+|++...- | ...|
T Consensus 235 ~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~l 314 (940)
T 2wxf_A 235 MKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPI 314 (940)
T ss_dssp CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEE
T ss_pred ceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEecCCccCccccccccccccceE
Confidence 578988876 44322 2344444477899999988875432 56799999985321 1 4589
Q ss_pred EEEEeecccc
Q 008859 138 GTAAIPAHTI 147 (551)
Q Consensus 138 G~v~Ipl~~l 147 (551)
|.+.+++-+-
T Consensus 315 g~~~~~lFd~ 324 (940)
T 2wxf_A 315 AWANLMLFDY 324 (940)
T ss_dssp EEEEEESBCT
T ss_pred EEEeeeEECC
Confidence 9999998653
No 68
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=65.21 E-value=26 Score=41.16 Aligned_cols=76 Identities=16% Similarity=0.264 Sum_probs=48.4
Q ss_pred CCcEEEEEE--CCeee---EEeeecCCCCCCeEeeEEEEeecC----CCCeEEEEEEecCCC-----CCceeEEEEeecc
Q 008859 80 SDPYVTVVV--PQATV---ARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVF-----GAQIIGTAAIPAH 145 (551)
Q Consensus 80 sDpYvtV~l--~~~~v---~rTrvi~ns~nP~WnE~F~i~vah----~~~~l~f~Vkd~d~~-----g~~lIG~v~Ipl~ 145 (551)
.+.||++.+ ++... -+|+.+ ...+|.|||...|++.- ..+.|.|+|++-... ....||.+.+++-
T Consensus 375 ~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lf 453 (1091)
T 3hhm_A 375 DKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLF 453 (1091)
T ss_dssp CCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESB
T ss_pred ceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeE
Confidence 567998887 33322 234333 35678899998887543 256799999986543 1358999999986
Q ss_pred cc----cccce-eeeE
Q 008859 146 TI----ATGEL-ISRW 156 (551)
Q Consensus 146 ~l----~~g~~-i~~w 156 (551)
+- ..|.. ..-|
T Consensus 454 d~~~~L~~G~~~L~lW 469 (1091)
T 3hhm_A 454 DYTDTLVSGKMALNLW 469 (1091)
T ss_dssp CTTCBBCCEEEEEECE
T ss_pred ccCCeEEcCCeEEEee
Confidence 53 34543 3346
No 69
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=57.16 E-value=46 Score=38.65 Aligned_cols=68 Identities=16% Similarity=0.143 Sum_probs=43.7
Q ss_pred CCcEEEEEE--CCeeeE--EeeecCCCCCCeEeeEEEEeecCC----CCeEEEEEEecCCC-----------------CC
Q 008859 80 SDPYVTVVV--PQATVA--RTRVLKNSQEPVWNEHFNIPLAHP----LSNLEIQVKDDDVF-----------------GA 134 (551)
Q Consensus 80 sDpYvtV~l--~~~~v~--rTrvi~ns~nP~WnE~F~i~vah~----~~~l~f~Vkd~d~~-----------------g~ 134 (551)
++.||++.+ ++.... +|.-+.-+.+|.|||.+.|++.-. .+.|.|+|++.... ..
T Consensus 238 ~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (961)
T 1e7u_A 238 LTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKA 317 (961)
T ss_dssp EEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------
T ss_pred ceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccccc
Confidence 578888766 554333 343333467899999988865432 56799999974221 13
Q ss_pred ceeEEEEeecccc
Q 008859 135 QIIGTAAIPAHTI 147 (551)
Q Consensus 135 ~lIG~v~Ipl~~l 147 (551)
..||-+.+++-+-
T Consensus 318 ~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 318 QLLYYVNLLLIDH 330 (961)
T ss_dssp CEEEEEEEESBCT
T ss_pred eeEEEEeeeeecC
Confidence 5788888887553
No 70
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=39.73 E-value=28 Score=40.96 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=32.8
Q ss_pred CCcEEEEEE--CCeeeE---EeeecCCCCCCeEeeEEEEeecCC----CCeEEEEEEec
Q 008859 80 SDPYVTVVV--PQATVA---RTRVLKNSQEPVWNEHFNIPLAHP----LSNLEIQVKDD 129 (551)
Q Consensus 80 sDpYvtV~l--~~~~v~---rTrvi~ns~nP~WnE~F~i~vah~----~~~l~f~Vkd~ 129 (551)
++.||++.+ ++..+. .|..+.-+.+|.|||.+.|++.-. .+.|.|+||+.
T Consensus 371 ~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 371 VKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp CCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred ceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 567777554 443322 344444477899999988875543 56789999875
No 71
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=27.02 E-value=84 Score=25.62 Aligned_cols=67 Identities=13% Similarity=0.202 Sum_probs=38.1
Q ss_pred CCCCCCCcchHHHHHHHHHhc---cc-eEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHhhhcCCeEEEEE
Q 008859 234 GGKLYKPGTCWEDICHAISEA---HH-LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLV 305 (551)
Q Consensus 234 ~G~~y~~~~~~~~l~~aI~~A---~~-~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~ka~~GV~V~iLv 305 (551)
...+|..+..++.+.-|...+ .+ .|.| +-....+++.+....+ . ....+.+.|+...+.||+|++-.
T Consensus 9 ~~~p~~~~~~~~al~~a~~~~~~~g~~~v~v--ff~~dgV~~~~~~~~~--~-~~~~~~~~l~~l~~~gv~v~~C~ 79 (117)
T 1jx7_A 9 NGAPYGSESLFNSLRLAIALREQESNLDLRL--FLMSDAVTAGLRGQKP--G-EGYNIQQMLEILTAQNVPVKLCK 79 (117)
T ss_dssp CCCTTTCSHHHHHHHHHHHHHHHCTTCEEEE--EECGGGGGGGBSCCCC--S-SSCCHHHHHHHHHHTTCCEEEEH
T ss_pred cCCCCCcHHHHHHHHHHHHHHhcCCCccEEE--EEEchHHHHHhcCCCC--C-cCCCHHHHHHHHHHCCCEEEEeH
Confidence 344465566676665555433 33 3322 2234455555443322 1 12578899999889999888774
No 72
>2cs4_A Protein C12ORF2; GTP binding, ubiquitin fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=23.79 E-value=1.2e+02 Score=25.08 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=45.8
Q ss_pred cCCeeEEEEeccccCCCCCceecCCCCCCCCcchHHHHHHHHHh----ccceEEEEEEEEeeeeeeeecCCCCCCCCCch
Q 008859 210 KGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISE----AHHLIYIVGWSVFHKIKLIREQTRPLPRGGDL 285 (551)
Q Consensus 210 ~g~~v~ly~d~~~~~~~~p~~~l~~G~~y~~~~~~~~l~~aI~~----A~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~ 285 (551)
.+..++.|.|| +...+.|-.- +..=+|+..|+.+ ..++..++-| |+-++..|. ..
T Consensus 6 ~~mel~Vwv~g--------~er~VsGvT~--~TTC~DVV~aL~~~~G~~~~y~LvE~w---------Rg~ER~L~~--~~ 64 (95)
T 2cs4_A 6 SGMELKVWVDG--------VQRIVCGVTE--VTTCQEVVIALAQAIGRTGRYTLIEKW---------RDTERHLAP--HE 64 (95)
T ss_dssp CCBCCCEEETT--------EEECCSSBCS--SSCHHHHHHHHHHHHSCCSEEEEEEEE---------TTEEEECCS--SS
T ss_pred CCCEEEEEECC--------ceeEEECCCC--CCcHHHHHHHHHhccCCCccEEEEEec---------CCCeecCCC--cc
Confidence 35567788877 2344555443 2333455555443 4678888888 555555443 47
Q ss_pred hHHHHHHHhhhcCCeEEEEE
Q 008859 286 TLGELLKYKSEEGVRVLLLV 305 (551)
Q Consensus 286 ~l~elL~~ka~~GV~V~iLv 305 (551)
++.++|.+=-++.=+|+..+
T Consensus 65 r~l~~l~~wG~~~~eV~F~L 84 (95)
T 2cs4_A 65 NPIISLNKWGQYASDVQLIL 84 (95)
T ss_dssp CHHHHHHTTGGGSTTCEEEE
T ss_pred cHHHHHHHhCcCCCceEEEE
Confidence 88899988777666666554
No 73
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=23.48 E-value=2e+02 Score=25.67 Aligned_cols=70 Identities=19% Similarity=0.175 Sum_probs=42.9
Q ss_pred CCcEEEEEECC------eeeEEeeecCC--CCCCeEeeEEEEeecCC------CCeEEEEEEecCCCC--CceeEEEEee
Q 008859 80 SDPYVTVVVPQ------ATVARTRVLKN--SQEPVWNEHFNIPLAHP------LSNLEIQVKDDDVFG--AQIIGTAAIP 143 (551)
Q Consensus 80 sDpYvtV~l~~------~~v~rTrvi~n--s~nP~WnE~F~i~vah~------~~~l~f~Vkd~d~~g--~~lIG~v~Ip 143 (551)
.|||++|++-. +..+.|.+-.. +..=.|+.+ +++..+ .+.+.|++++...-. -+..+-+.++
T Consensus 32 ~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~--v~lqtple~lp~G~aivfElkH~k~kkkk~S~kCw~f~~ 109 (152)
T 2qzq_A 32 IDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVD--VEIQRHLEKLPKGAAIFFEFKHYKPKKRFTSTKCFAFME 109 (152)
T ss_dssp EEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEE--EECSSCGGGSCTTCEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred cCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeE--EEeeCcHHHCCCCcEEEEEEEEecccceeeeeeeEEEEE
Confidence 68999999932 23345655422 222345444 444433 345788888765543 3467778889
Q ss_pred cccccccc
Q 008859 144 AHTIATGE 151 (551)
Q Consensus 144 l~~l~~g~ 151 (551)
++++.+|.
T Consensus 110 ~d~i~~g~ 117 (152)
T 2qzq_A 110 MDEIKPGP 117 (152)
T ss_dssp GGGCCSEE
T ss_pred hhhcccCc
Confidence 99888765
No 74
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.34 E-value=99 Score=26.15 Aligned_cols=45 Identities=18% Similarity=0.406 Sum_probs=33.1
Q ss_pred hhHHHHHHHhhhcCCeEEEEEeCCCCccCccCCCCCCcccCCcHHHHhHhcCCCcEEEe
Q 008859 285 LTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVL 343 (551)
Q Consensus 285 ~~l~elL~~ka~~GV~V~iLvwD~~~s~~~~~~~~~g~~~t~~~~~~~~~~~~~v~~~l 343 (551)
.-+.+.+.++.++||+|.+. |++...- ...+....|+..||.+.-
T Consensus 90 ewikdfieeakergvevfvv-ynnkddd-------------rrkeaqqefrsdgvdvrt 134 (162)
T 2l82_A 90 EWIKDFIEEAKERGVEVFVV-YNNKDDD-------------RRKEAQQEFRSDGVDVRT 134 (162)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-EECSCHH-------------HHHHHHHHHCCSSCEEEE
T ss_pred HHHHHHHHHHHhcCcEEEEE-ecCCCch-------------hHHHHHHHhhhcCceeee
Confidence 56788889999999999987 6765211 123566778899999873
No 75
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.04 E-value=1.7e+02 Score=25.51 Aligned_cols=78 Identities=14% Similarity=0.083 Sum_probs=46.6
Q ss_pred CCCCceecCCCCCCCCcchHHHHHHHHHhc--cceEEEEEEEEeeeeeeeecCCCCCCCCCchhHHHHHHHh-hhcCCeE
Q 008859 225 GILPEIPLDGGKLYKPGTCWEDICHAISEA--HHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYK-SEEGVRV 301 (551)
Q Consensus 225 ~~~p~~~l~~G~~y~~~~~~~~l~~aI~~A--~~~I~I~~w~~~~~~~L~r~~~~~~p~g~~~~l~elL~~k-a~~GV~V 301 (551)
|..--..+..+.+|-++.+++++.-|...+ .+.|. .-|-+...+++..... .|......+.+.++.. .+.||++
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~-~VFf~~DGV~~a~~~q--~p~~~~~~l~~~~~~La~~~gv~l 87 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELS-SVFFYREGVYNANQLT--SPASDEFDLVRAWQQLNAQHGVAL 87 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEE-EEEECGGGGGGGBTTC--CCCTTSCCHHHHHHHHHHHHCCEE
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccC-EEEEechHHHHHhcCC--CCccccCChHHHHHHHHHHcCCEE
Confidence 444456677788898888998877666544 35551 3343445555443322 2222235677888888 4669996
Q ss_pred EEEE
Q 008859 302 LLLV 305 (551)
Q Consensus 302 ~iLv 305 (551)
++=+
T Consensus 88 ~vC~ 91 (140)
T 2d1p_A 88 NICV 91 (140)
T ss_dssp EEEH
T ss_pred EEeH
Confidence 6554
Done!