BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008864
(550 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q921G8|GCP2_MOUSE Gamma-tubulin complex component 2 OS=Mus musculus GN=Tubgcp2 PE=2
SV=2
Length = 905
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/470 (41%), Positives = 295/470 (62%), Gaps = 14/470 (2%)
Query: 1 MVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKA 60
+V QLE R G LS+Q LWFY QP + ++ ++++ G + L+LL ++
Sbjct: 306 LVTQLEQLHRQGLLSLQKLWFYIQPAMRTIDILASLATSVDKGECVGGSTLSLLHDRSFN 365
Query: 61 MAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYD 120
GD+ + L +T+ AS Y ILE+W+Y G+I DPY EF + E+ L KE + +DY+
Sbjct: 366 YTGDSQAQELCLYLTKAASAPYFEILEKWIYRGIIHDPYSEFMV-EEHELRKEKIQEDYN 424
Query: 121 AKYWRQRYS-LKDGIPSFLANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSNH 179
KYW QRY+ L IPSFL +AGKIL+TGKYLNV+RECGH P ++ +++
Sbjct: 425 DKYWDQRYTVLPQQIPSFLQKVAGKILSTGKYLNVVRECGHDVTCPVAK--EIIYTLKER 482
Query: 180 HYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQ 239
Y+E ++ A+ +AS LL+ + E +L+ LRSIKRY L+DQGDF VHFMD+ EEL K
Sbjct: 483 AYVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLTEEELRKP 542
Query: 240 LDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIK-----TS 294
+++I + +L++LL++ALR + A DP +DL + L+ ++ + +E K T
Sbjct: 543 VEDIILTRLEALLELALRMSTANTDPFKDDLKIELMPHDLITQLLRVLAIETKQEKAMTH 602
Query: 295 SDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGA 354
+D +L +++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC
Sbjct: 603 ADPTEL----TLSGLEAFSFDYMVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSV 658
Query: 355 WQVHQGARAFN-ASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKS 413
W ++ A+ S + + L + ML F+ ++ +Y+ FEV+EP WH++ L++A +
Sbjct: 659 WISNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASN 718
Query: 414 IDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLISS 463
ID+V+ HH FLD CL++C+L P+LLK +L S+C+ + Q S
Sbjct: 719 IDDVLGHHTSFLDNCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQS 768
>sp|Q9BSJ2|GCP2_HUMAN Gamma-tubulin complex component 2 OS=Homo sapiens GN=TUBGCP2 PE=1
SV=2
Length = 902
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/470 (40%), Positives = 298/470 (63%), Gaps = 14/470 (2%)
Query: 1 MVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKA 60
+V+QLE R G LS+Q LWFY QP + +M ++++ G + L+LL ++ +
Sbjct: 306 LVSQLEQLHRQGLLSLQKLWFYIQPAMRTMDILASLATSVDKGECLGGSTLSLLHDRSFS 365
Query: 61 MAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYD 120
GD+ + L +T+ AS Y +LE+W+Y G+I DPY EF + E+ L KE + +DY+
Sbjct: 366 YTGDSQAQELCLYLTKAASAPYFEVLEKWIYRGIIHDPYSEFMV-EEHELRKERIQEDYN 424
Query: 121 AKYWRQRYSL-KDGIPSFLANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSNH 179
KYW QRY++ + IPSFL +A KIL+TGKYLNV+RECGH P ++ +++
Sbjct: 425 DKYWDQRYTIVQQQIPSFLQKMADKILSTGKYLNVVRECGHDVTCPVAK--EIIYTLKER 482
Query: 180 HYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQ 239
Y+E ++ A+ +AS LL+ + E +L+ LRSIKRY L+DQGDF VHFMD+A EEL K
Sbjct: 483 AYVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLAEEELRKP 542
Query: 240 LDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIK-----TS 294
+++IT +L++LL++ALR + A DP +DL + L+ ++ + +E K
Sbjct: 543 VEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAH 602
Query: 295 SDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGA 354
+D +L +++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC
Sbjct: 603 ADPTEL----ALSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSV 658
Query: 355 WQVHQGARAFN-ASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKS 413
W ++ A+ + S + + L + ML F+ ++ +Y+ FEV+EP WH++ L++A +
Sbjct: 659 WISNKTAKQHSLHSAQWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASN 718
Query: 414 IDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLISS 463
ID+V+ HH FLD CL++C+L P+LLK +L S+C+ + Q S
Sbjct: 719 IDDVLGHHTGFLDTCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQS 768
>sp|Q5R5J6|GCP2_PONAB Gamma-tubulin complex component 2 OS=Pongo abelii GN=TUBGCP2 PE=2
SV=1
Length = 902
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/470 (40%), Positives = 298/470 (63%), Gaps = 14/470 (2%)
Query: 1 MVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKA 60
+V+QLE R G LS+Q LWFY QP + +M ++++ G + L+LL ++ +
Sbjct: 306 LVSQLEQLHRQGLLSLQKLWFYIQPAMRTMDILASLATSVDKGECLGGSTLSLLHDRSFS 365
Query: 61 MAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYD 120
GD+ + L +T+ AS Y +LE+W+Y G+I DPY EF + E+ L KE + +DY+
Sbjct: 366 YTGDSQAQELCLYLTKAASAPYFEVLEKWIYRGIIHDPYSEFMV-EEHELRKERIQEDYN 424
Query: 121 AKYWRQRYSL-KDGIPSFLANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSNH 179
KYW QRY++ + IPSFL +A KIL+TGKYLNV+RECGH P ++ +++
Sbjct: 425 DKYWDQRYTIVQQQIPSFLQKMADKILSTGKYLNVVRECGHDVTCPVAK--EIIYTLKER 482
Query: 180 HYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQ 239
Y+E ++ A+ +AS LL+ + E +L+ LRSIKRY L+DQGDF VHFMD+A EEL K
Sbjct: 483 AYVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLAEEELRKP 542
Query: 240 LDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIK-----TS 294
+++IT +L++LL++ALR + A DP +DL + L+ ++ + +E K
Sbjct: 543 VEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAH 602
Query: 295 SDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGA 354
+D +L +++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC
Sbjct: 603 ADPTEL----TLSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSV 658
Query: 355 WQVHQGARAFN-ASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKS 413
W ++ A+ + S + + L + ML F+ ++ +Y+ FEV+EP WH++ L++A +
Sbjct: 659 WISNKTAKQHSLPSAQWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASN 718
Query: 414 IDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLISS 463
ID+V+ +H FLD CL++C+L P+LLK +L S+C+ + Q S
Sbjct: 719 IDDVLGYHTGFLDTCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQS 768
>sp|Q9XYP7|GCP2_DROME Gamma-tubulin complex component 2 homolog OS=Drosophila
melanogaster GN=Grip84 PE=1 SV=2
Length = 852
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 295/516 (57%), Gaps = 37/516 (7%)
Query: 1 MVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKA 60
++ Q E + R RL++Q L +Y QP + M V + + ++ + VL L + K
Sbjct: 294 IIVQAEQELRHNRLTLQKLLYYLQPTMWVMHEVWSSLVIIQLSDSRDAEVLTYLHERIKR 353
Query: 61 MAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYD 120
+ G+ + L+ + + A+ Y+ +L+ W+ +GVI D + EF + +++ + ++ L + Y
Sbjct: 354 LEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLVVDNEVIHRDELPEHYS 413
Query: 121 AKYWRQRYSLKD-GIPSFLANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSNH 179
YW +RY+L+D IPSFLA + KIL TGKYLNV+R+CG +PT E + S
Sbjct: 414 DDYWERRYTLRDEQIPSFLAKYSDKILRTGKYLNVIRQCGKRV-MPTQEMNLEFDPTSER 472
Query: 180 HYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQ 239
H + + AY FA+ LL+++ DLMG L+S+KRYLLL+QGDF + FMD +EL K
Sbjct: 473 H-VSVINDAYYFAARMLLDVLLTENDLMGHLQSVKRYLLLNQGDFTMQFMDACEDELTKN 531
Query: 240 LDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVD 299
+D + L++LL + LR ++A DP +DL C + L+ +M+ +I ++
Sbjct: 532 VDHVLPMTLENLLGLTLRISSARNDPYKDDLHCELLPYDLVTQMS-----KIMKKEENWQ 586
Query: 300 LEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQ 359
+ + ++GLE F+ +Y+V+WP S+V++ +++KYQM+FR LF+CKHVERQLC W+ +
Sbjct: 587 AQPRLDLSGLECFAFTYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIWKENS 646
Query: 360 GARAFNASGTAISRSSLLCRS-MLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVI 418
AR F ++ R++ R M+ I +L +Y+ E++EPNWH+ +++T +++D V+
Sbjct: 647 IARQFEPQAASLYRAAFTLRQRMMNAIQNLEYYMMIEIIEPNWHIFIEKMKTVENVDNVL 706
Query: 419 QHHDFFLDKCLRECLL-HLPDLLKKVERLKSLCLQYA------------AATQWLISSSI 465
+ H FLD CL+ C+L L + + +L +CL+Y A + ++ S
Sbjct: 707 RLHQDFLDSCLKNCMLTESSHLNRSIFKLCKICLKYCEFIQITQRYFQDAELRSMVRDSA 766
Query: 466 D----------LPKLE---EPSDGFSGSEKFKRLKL 488
D P++E +P+D F SE+ +R L
Sbjct: 767 DSSESEQESLHCPQIETPLDPTDTF--SERVRRFDL 800
>sp|Q9Y705|ALP4_SCHPO Spindle pole body component alp4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=alp4 PE=1 SV=1
Length = 784
Score = 228 bits (581), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 244/482 (50%), Gaps = 54/482 (11%)
Query: 47 GSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAE 106
G V++ L AGD R +L + + AS Y +L W++ G+++DPY EF I
Sbjct: 255 GGQVISFLTESLTKYAGDPVARKILTYLLREASRPYTKMLNEWIHLGLVNDPYDEFMIKI 314
Query: 107 DKSLLKESLTQDYDAKYWRQRYSLK-DGIPSFLANIAGKILTTGKYLNVMRECGHSAQVP 165
K + L +DY +YW +RY ++ D +P L ++ K+L GKYLNV+ EC
Sbjct: 315 HKGITSMQLDEDYTDEYWEKRYVIREDQVPPQLLDLQNKVLFAGKYLNVVLECRKGVNNL 374
Query: 166 TSENSK------LL---SFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRY 216
S N+K LL +F ++ L + AY +A+ LL L++ L L S+K Y
Sbjct: 375 ASLNAKDDTQNQLLWPSTFDDDNFTLNIMN-AYVYANESLLQLLQSSQSLYAHLYSLKHY 433
Query: 217 LLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALR--STAAAADPCHEDLTCSV 274
LDQ DF F+D A+ EL K I++ KLQS LD+ALR T A DP E +T V
Sbjct: 434 FFLDQSDFFTTFLDNAQHELRKPAKYISITKLQSQLDLALRQPGTITATDPHKEYVTVEV 493
Query: 275 ERSSL---LKRMATLKGVEIKTSS-------DSVDLEQPV-------------------- 304
++SL L + ++ G+E TSS +S+ + V
Sbjct: 494 NQTSLIDWLMHIVSISGLEEGTSSQGNEVWNESITKQADVGNETRNFESEHNRSTQGTSK 553
Query: 305 -----SITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQ 359
I G ET L YKV +PLS+++SRKA+ +YQ++FR +HVE QL +W H
Sbjct: 554 VGSDKDINGFETMQLCYKVPFPLSLILSRKAIIRYQLLFRYFLLLRHVEMQLENSWVQHS 613
Query: 360 GARAF--NASGTAIS---RSSLLCRS-MLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKS 413
A+ N+S I R+S L R+ ML F+ +++Y T EV+E +W L+ A++
Sbjct: 614 KNSAWRLNSSNAKIEQWKRNSWLLRTRMLSFVQKIIYYTTSEVIETHWGKFMGELENART 673
Query: 414 IDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLISSSIDLPKLEEP 473
+D ++Q H FLD CL+EC+L LLK +L + C +A+ T S L EE
Sbjct: 674 VDNLMQEHIDFLDTCLKECMLTNSRLLKVQSKLLNTCAMFASYTSTFTRSLYLLENSEES 733
Query: 474 SD 475
D
Sbjct: 734 FD 735
>sp|Q95ZG3|SPC97_DICDI Spindle pole body component 97 OS=Dictyostelium discoideum GN=spc97
PE=2 SV=2
Length = 1335
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 168/324 (51%), Gaps = 56/324 (17%)
Query: 1 MVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKA 60
+V+QLE Q + RLS+Q +WFY QP + + + + V + N G V+NLL
Sbjct: 523 LVSQLEGQLKSERLSLQRMWFYLQPTIKTFEILYRVTSEIMRCNSHGVQVINLLLKLQSK 582
Query: 61 MAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYD 120
+ D L + + + +L +L+ W+++G+I D Y EF I E+ L ++++ +D++
Sbjct: 583 YSSDKKTDDLFHYLIKATTLPFLEMLDLWIHQGIIRDTYFEFMIEENTDLKRDNINRDFN 642
Query: 121 AKYWRQRYSLK-DGIPSFLANIAGKILTTGKYLNVMRECGHS------------------ 161
YW QRY ++ D IP +L + A KILTTGKYLNV+REC S
Sbjct: 643 DLYWEQRYQIRQDQIPKYLQSHALKILTTGKYLNVVRECNQSISQQQQHNKSDNNNNNNN 702
Query: 162 -------------------------------AQVPTSENSKLLSFGSNHH-YLECVKVAY 189
+ +PT+ ++ + N + Y++ ++ AY
Sbjct: 703 NVKLNSQQQLLLLKLNTTQQQQQQQLSSTSASMIPTT----IIEYSKNENVYIDKIEKAY 758
Query: 190 EFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQ 249
++ASG LLNL+ L+ +L++IK Y LL +GDF HFMD +EL K LD+I + K+
Sbjct: 759 DYASGILLNLLINERHLISRLKAIKHYFLLCKGDFFSHFMDTTYDELKKPLDQINMVKMN 818
Query: 250 SLLDIALR-STAAAADPCHEDLTC 272
SLL ++LR S+ + D +DL C
Sbjct: 819 SLLQLSLRTSSISEEDEFKDDLEC 842
>sp|O73787|GCP3_XENLA Gamma-tubulin complex component 3 homolog OS=Xenopus laevis
GN=tubgcp3 PE=1 SV=1
Length = 906
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 196/399 (49%), Gaps = 58/399 (14%)
Query: 58 AKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQ 117
A GD +RSL++ + + L L RW+Y+G ++D Y EFF+A D + + L
Sbjct: 401 AYTKTGDPYMRSLVQHILGLVAYPILNFLYRWIYDGELEDTYHEFFVASDPVVKTDRL-- 458
Query: 118 DYDAKYWRQRYSL-KDGIPSFLA-NIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSF 175
W +YSL K IPSF+ + + K+L GK +N + + H Q P S K ++
Sbjct: 459 ------WHDKYSLRKSMIPSFMTMDQSRKVLLIGKSINFLHQVCHD-QTPAS---KAMAV 508
Query: 176 GSN---------------HHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLD 220
G + + + + AY S LL+++ + Y+L+ +++++RYLLL
Sbjct: 509 GKSAESPKDAAELFTDLENAFQTKIDAAYFDTSKYLLDVLNKNYNLLEHMQAMRRYLLLG 568
Query: 221 QGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLL 280
QGDF+ H MD+ + EL++ + L +L+ A+R+T A D +L
Sbjct: 569 QGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFD-----------NPEIL 617
Query: 281 KRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRL 340
KR+ D LE TG + FSL Y V P++ V +R+ ++ Y VF
Sbjct: 618 KRL------------DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNF 665
Query: 341 LFHCKHVERQLCGAWQVHQ-GARAFNA----SGTAISRSSLLCRSMLKFINSLLHYLTFE 395
L+ K +E L W+ H A+ SG + + +L M+ FI+ + +Y+TFE
Sbjct: 666 LWRAKRMEYILTDIWKGHMCNAKLLKGMPELSGV-LHQCHILASEMVHFIHQMQYYITFE 724
Query: 396 VLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 434
VLE +W + N++ A+ +D +I HD FLD + CLL
Sbjct: 725 VLECSWDELWNKVLKAQDLDHIIAAHDVFLDTIISRCLL 763
>sp|Q96CW5|GCP3_HUMAN Gamma-tubulin complex component 3 OS=Homo sapiens GN=TUBGCP3 PE=1
SV=2
Length = 907
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 195/395 (49%), Gaps = 50/395 (12%)
Query: 58 AKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQ 117
A GD +RSL++ + S+ L L RW+Y+G ++D Y EFF+A D ++ + L
Sbjct: 402 AYTKTGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPTVKTDRL-- 459
Query: 118 DYDAKYWRQRYSL-KDGIPSFLA-NIAGKILTTGKYLNVMRECGHSAQVPTS-------- 167
W +Y+L K IPSF+ + + K+L GK +N + + H Q PT+
Sbjct: 460 ------WHDKYTLRKSMIPSFMTMDQSRKVLLIGKSINFLHQVCHD-QTPTTKMIAVTKS 512
Query: 168 ----ENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGD 223
+++ L + + + AY S LL+++ ++Y L+ +++++RYLLL QGD
Sbjct: 513 AESPQDAADLFTDLENAFQGKIDAAYFETSKYLLDVLNKKYSLLDHMQAMRRYLLLGQGD 572
Query: 224 FLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRM 283
F+ H MD+ + EL++ + L +L+ A+R+T A D +L+R+
Sbjct: 573 FIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDS-----------PEILRRL 621
Query: 284 ATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFH 343
D LE TG + FSL Y V P++ V +R+ ++ Y VF L+
Sbjct: 622 ------------DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWR 669
Query: 344 CKHVERQLCGAWQVHQGA----RAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEP 399
K +E L + H R + + +L M+ FI+ + +Y+TFEVLE
Sbjct: 670 AKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLEC 729
Query: 400 NWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 434
+W + N++Q A+ +D +I H+ FLD + CLL
Sbjct: 730 SWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLL 764
>sp|P58854|GCP3_MOUSE Gamma-tubulin complex component 3 OS=Mus musculus GN=Tubgcp3 PE=2
SV=2
Length = 905
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 194/395 (49%), Gaps = 50/395 (12%)
Query: 58 AKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQ 117
A GD ++SL++ + S+ L L RW+Y+G ++D Y EFF+A D ++ + L
Sbjct: 400 AYTKTGDPYMKSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPTVKTDRL-- 457
Query: 118 DYDAKYWRQRYSL-KDGIPSFLA-NIAGKILTTGKYLNVMRECGHSAQVPTSE------- 168
W +Y+L K IPSF+ + + K+L GK +N + + H Q PT++
Sbjct: 458 ------WHDKYTLRKSMIPSFITMDQSRKVLLIGKSINFLHQVCHD-QTPTTKMIAVTKS 510
Query: 169 -----NSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGD 223
++ L + + + AY S LL+++ ++Y L+ +++++RYLLL QGD
Sbjct: 511 AESPRDAADLFTDLENAFQGKIDAAYFETSKYLLDVLNKKYSLLEHMQAMRRYLLLGQGD 570
Query: 224 FLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRM 283
F+ H MD+ + EL++ + L +L+ A+R+T A D +LKR+
Sbjct: 571 FIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDS-----------PEILKRL 619
Query: 284 ATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFH 343
D LE TG + FSL Y V P++ V +R+ ++ Y VF L+
Sbjct: 620 ------------DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWR 667
Query: 344 CKHVERQLCGAWQVHQGA----RAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEP 399
K +E L + H R + + +L M+ FI+ + +Y+TFEVLE
Sbjct: 668 AKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLEC 727
Query: 400 NWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 434
+W + NR+Q A+ +D +I H+ FL+ CLL
Sbjct: 728 SWDELWNRVQQAQDLDHIIAAHEAFLNTITSRCLL 762
>sp|Q9XYP8|GCP3_DROME Gamma-tubulin complex component 3 homolog OS=Drosophila
melanogaster GN=l(1)dd4 PE=1 SV=2
Length = 917
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 186/391 (47%), Gaps = 52/391 (13%)
Query: 63 GDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAK 122
G++ V L+E + + ++ +W+ EG I D + EFF+ K + + L
Sbjct: 402 GNDMVNKLVEDLLTAICGPLVRMISKWILEGGISDMHREFFVKSIKDVGVDRL------- 454
Query: 123 YWRQRYSLK-DGIPSFLA-NIAGKILTTGKYLNVMRE-CGHSA---------QVPTSENS 170
W ++ L+ +P F+ ++A KIL TGK +N +RE C +V S S
Sbjct: 455 -WHDKFRLRLPMLPKFVPMDMANKILMTGKSINFLREICEEQGMMKERDELMKVMESSAS 513
Query: 171 KLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMD 230
++ S+ + + V+ Y+ S +L+++ + L+ L ++RYLLL QGDF+ ++
Sbjct: 514 QIFSYTPDTSWHAAVETCYQQTSKHVLDIMVGPHKLLDHLHGMRRYLLLGQGDFISILIE 573
Query: 231 IAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVE 290
+ EL + +I L S+LD ALR T A D +L +
Sbjct: 574 NMKNELERPGLDIYANDLTSMLDSALRCTNAQYDD-----------PDILNHL------- 615
Query: 291 IKTSSDSVDLEQPVS-ITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVER 349
V +++P + G SL Y V PL+ ++ + Y+++F+ L+ KH+E
Sbjct: 616 ------DVIVQRPFNGDIGWNIISLQYIVHGPLAAML-ESTMPTYKVLFKPLWRMKHMEF 668
Query: 350 QLC-GAWQVHQG-ARAFNASGTAISRSS----LLCRSMLKFINSLLHYLTFEVLEPNWHV 403
L W+ G A+A + I ++S L ++ FI+ + +Y+ FEV+E NW
Sbjct: 669 VLSMKIWKEQMGNAKALRTMKSEIGKASHRLNLFTSEIMHFIHQMQYYVLFEVIECNWVE 728
Query: 404 MHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 434
+ ++Q A ++DE+++ H+ FL L C +
Sbjct: 729 LQKKMQKATTLDEILEAHEKFLQTILVGCFV 759
>sp|Q9USQ2|ALP6_SCHPO Spindle pole body component alp6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=alp6 PE=1 SV=2
Length = 832
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 185/386 (47%), Gaps = 41/386 (10%)
Query: 63 GDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAK 122
GD ++ L +K+ + ++E W+Y+G + DPY EFF+ E S + D+ +
Sbjct: 356 GDPLIQELSDKILTEITGPLYEMIENWIYKGELVDPYQEFFVKEKNG----SESHDHQGQ 411
Query: 123 ---YWRQRYSL-KDGIPSFLAN-IAGKILTTGKYLNVMRE-CGHS--AQVPTSENSKLLS 174
W+ +Y L K+ IPSFL+ + KI GK LN R CG AQ + K LS
Sbjct: 412 GDVVWKGKYFLDKELIPSFLSEELVDKIFLIGKSLNFARYGCGDFDWAQEHYQKLVKKLS 471
Query: 175 FGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIARE 234
+ H V AY + L+ L++E + L L++IK+YLLL QGDF+ M+
Sbjct: 472 YRDPHSLETVVDKAYTESINHLVYLMEEVFHLTDHLKAIKKYLLLGQGDFVDLLMESLGN 531
Query: 235 ELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTS 294
L + + + L + L+ A+RS+ A+ +P + +LKR+
Sbjct: 532 SLDQPANTLFRHNLTASLESAIRSSNASYEPEY-----------VLKRL----------- 569
Query: 295 SDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGA 354
D+ LE TG + F+L YKV P++++I+ +Y +F L+ K +E L +
Sbjct: 570 -DARLLELSHGETGWDVFTLEYKVDSPINVIITPYCSRQYLKIFNFLWRLKRIEFALAHS 628
Query: 355 W-QVHQGARAF--NASGTAISRSSLLCR--SMLKFINSLLHYLTFEVLEPNWHVMHNRLQ 409
W +V+ G R N T + C M+ F+ L +Y+ FEV+E +W + ++
Sbjct: 629 WRRVNLGERNVFRNLDYTKFEWHFVSCHLAEMIHFVCQLQYYILFEVIEISWQELQLAME 688
Query: 410 TAK-SIDEVIQHHDFFLDKCLRECLL 434
++D I+ H+ ++ + LL
Sbjct: 689 KPNATLDTYIEAHEKYVTSITHKGLL 714
>sp|Q95ZG4|SPC98_DICDI Spindle pole body component 98 OS=Dictyostelium discoideum GN=spc98
PE=1 SV=2
Length = 813
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 153/303 (50%), Gaps = 28/303 (9%)
Query: 168 ENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVH 227
E +K L++ + E +++ +S LL ++ R+ M ++++K+YLLL QGDF+ +
Sbjct: 459 EKTKELNYINKEVLQEIIELVSRQSSERLLKIVLNRFKFMNHVKALKKYLLLGQGDFIQY 518
Query: 228 FMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLK 287
MD+ E+L+K +I KL +D A+R++ A E ++ R+
Sbjct: 519 LMDLIGEDLLKPTSQIQRHKLVGWMDTAIRNSNA-----------QFEEQDIVNRLDI-- 565
Query: 288 GVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHV 347
++ E+P +I G + FSL Y V PL+ ++S + +Y+ +F ++ K V
Sbjct: 566 ---------ALLPERPGNI-GWDIFSLDYHVDTPLNTILSPNDILRYKKIFHFMWGIKRV 615
Query: 348 ERQLCGAWQVHQGARA---FNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVM 404
E L W+ + + + + G I +S L+ M+ FI++ +YL FEVLE +W +
Sbjct: 616 EYSLASIWRKIRSSTSLSILSPIGGDIHKSHLIMNEMVHFISNFQYYLMFEVLECSWKNL 675
Query: 405 HNRL-QTAKSIDEVIQ-HHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLIS 462
+ Q A +D++I+ HH + D C + L + + ++L S+ +++ LI+
Sbjct: 676 EKFIDQEATDLDQLIEAHHQYLQDICNKMFLSNSDSCYECFKKLLSIIIKFTLLQTKLIN 735
Query: 463 SSI 465
SI
Sbjct: 736 LSI 738
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 14 LSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEK 73
L++ L+ + Q L ++ + + + + G +L+ + + +K GD +R L+
Sbjct: 264 LTLIRLFVWIQSPLKRLKVLGTCVDSITVD-MKGGEILSKIDTLSKH--GDQDIRILIHN 320
Query: 74 MTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSLKDG 133
+ ++ W+++G I+DPY EFFI + +S+ E K W++++++
Sbjct: 321 IMFKICQPLFSMIRLWMFKGEINDPYQEFFIRQYESVQLE--------KTWKEKFAIVAR 372
Query: 134 -IPSFLA-NIAGKILTTGKYLNVMRE-CGH 160
+PSF++ ++ +IL GK +N M++ C +
Sbjct: 373 LLPSFISLPLSKRILIIGKSINYMKQFCNN 402
>sp|Q9M350|GCP4_ARATH Gamma-tubulin complex component 4 homolog OS=Arabidopsis thaliana
GN=At3g53760 PE=2 SV=2
Length = 745
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 203/520 (39%), Gaps = 89/520 (17%)
Query: 36 VIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVI 95
VI + ++ G +LN+L + G +R+ L+++ L W+ G++
Sbjct: 167 VILEIERDDIRGGQLLNVLNK--RCHCGVPELRTCLQRLLWNGHQVMYNQLAAWMVYGIL 224
Query: 96 DDPYGEFFIA--EDKSLLKESLTQDYDAKY------------WRQRYSLK-DGIPSFLAN 140
DP+GEFFI +D L S ++ K W + + D +P ++
Sbjct: 225 QDPHGEFFIKRQDDGDLDHRSSQEEVSEKLARTSVHETSLTDWHSGFHISLDMLPDYIPM 284
Query: 141 IAGK-ILTTGKYLNVMRECGHSAQ------------------------------------ 163
G+ IL GK + V+R + Q
Sbjct: 285 RLGESILFAGKAIRVLRNPSPAFQFQKDKSFQQTMRGSQRIRGFMHSDFPETETELDADL 344
Query: 164 -----VPTSENSKL------LSFGSNHHY--LEC-VKVAYEFASGELLNLIKERYDLMGK 209
+P SE K+ L S H EC V A+ L L+ R DL G
Sbjct: 345 TGGELLPQSEADKIEAMLKDLKESSEFHKRSFECTVDSVRAIAASHLWQLVVVRADLNGH 404
Query: 210 LRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEK-LQSLLDIALRSTAAAADPCHE 268
L+++K Y LL++GDF F++ +R+ + + T E L +A T A D
Sbjct: 405 LKALKDYFLLEKGDFFQCFLEESRQLMRLPPRQSTGESDLMVPFQLAATKTIAEEDKYFS 464
Query: 269 DLTCSVERSSLLKRMATLKGVEIKTS-SDSVDLEQPVSITGLETFSLSYKVQWPLSIVIS 327
++ + + R + V K S + +L S+ G + +L Y V WP+ + +
Sbjct: 465 RVSLRMPSFGVTVRSSQADMVRSKVSLTGKANLTSDTSVDGWDAIALEYSVDWPMQLFFT 524
Query: 328 RKALTKYQMVFRLLFHCKHVERQLCGAWQ--VHQG--------ARAFNASGTAISRSSL- 376
++ L+KY VF+ L K + +L +W +HQ N S + R +
Sbjct: 525 QEVLSKYLKVFQYLIRLKRTQMELEKSWASVMHQDHIESAQHRKDGLNGSTSQQRRQGIR 584
Query: 377 ---LCRSMLKF-INSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLREC 432
R + F I +L Y+ +V+E W V+ + ++ E++ H +L + +
Sbjct: 585 PMWRVREHMAFLIRNLQFYIQVDVIESQWKVLQTHIHDSQDFTELVGFHQEYLSALISQS 644
Query: 433 LLHLPDLLKKVERLKSLCLQYAAATQWLISSSIDLPKLEE 472
L + + + ++ + LCLQ+ W I + P E
Sbjct: 645 FLDIGSVSRILDSIMKLCLQFC----WNIENQESNPNTSE 680
>sp|Q9SC88|GCP4_MEDTR Gamma-tubulin complex component 4 homolog OS=Medicago truncatula
GN=85P PE=2 SV=1
Length = 739
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/507 (21%), Positives = 200/507 (39%), Gaps = 91/507 (17%)
Query: 36 VIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVI 95
+I K + G +LNLL K G +++ ++++ L W+ G++
Sbjct: 151 LILKIERGDIRGGELLNLLHK--KCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGIL 208
Query: 96 DDPYGEFFIA--EDKSLLKESLTQDYDAKY------------WRQRYSLK-DGIPSFLA- 139
+D +GEFFI+ E + + S Q+ K W + + D +P ++
Sbjct: 209 EDRHGEFFISRQEGRDVENSSSHQEISEKLSRLSTADASLSDWHMGFHISLDMLPEYIPM 268
Query: 140 NIAGKILTTGKYLNVMRECGHS-------------------------------------- 161
+A IL GK + V+R S
Sbjct: 269 RVAESILFAGKAVRVLRNPSPSFLSQDDVYPQEPKRFPKIHGFEGRFNFQREPIINTGMR 328
Query: 162 --AQVPTSENSKL------LSFGSNHHY--LEC-VKVAYEFASGELLNLIKERYDLMGKL 210
+P SE K+ L S H EC V A+ L L+ R DL G L
Sbjct: 329 VEDLLPQSEADKIENMLLDLKESSEFHKRSFECAVDSIQAIAASHLWQLVVVRADLNGHL 388
Query: 211 RSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVE-KLQSLLDIALRSTAAAADPCHED 269
+++K Y LL +GDF F++ +R+ + + T E L +A T D
Sbjct: 389 KALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLMVPFQLASLKTIGEEDKYFSK 448
Query: 270 LT-------CSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPL 322
++ +V+ S L AT + + + + +S+ G + +L Y ++WPL
Sbjct: 449 VSLRMPSYGITVKPSLLNVPKATSAAADGISGASISNASSEMSVDGWDGIALEYSIEWPL 508
Query: 323 SIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQ--VHQGARAFNASGTAISRSSLLC-- 378
+ +++ L++Y VF+ L K + +L W +HQ F + + S +
Sbjct: 509 HLFFTQEVLSRYLKVFQYLLRLKRTQMELEKLWASVMHQYHSIFAKNKKSDQDKSPITQQ 568
Query: 379 -----RSMLK-------FINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLD 426
RSM + I +L Y+ +V+E W+++ + +Q + E++ H +L
Sbjct: 569 RDQRFRSMWRVREHMAFLIRNLQFYIQVDVIESQWNILQSHIQDSHDFTELVGFHQEYLS 628
Query: 427 KCLRECLLHLPDLLKKVERLKSLCLQY 453
+ + L + + + ++ + LCLQ+
Sbjct: 629 ALISQTFLDIGSVSRILDGIMKLCLQF 655
>sp|Q9D4F8|GCP4_MOUSE Gamma-tubulin complex component 4 OS=Mus musculus GN=Tubgcp4 PE=2
SV=2
Length = 667
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 189/467 (40%), Gaps = 59/467 (12%)
Query: 32 AVSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVY 91
+V V+ + + G +L + + G VRS LEK+ L W+
Sbjct: 135 SVMVVVEQIKSQKIHGCQILETVYKHS--CGGLPPVRSALEKILAVCHGVMYKQLSAWML 192
Query: 92 EGVIDDPYGEFFIAEDKS--LLKESLTQDYD--------AKYWRQ--------------- 126
G++ D + EFFI + S L L +D + K R+
Sbjct: 193 HGLLLDQHEEFFIKQGPSSGTLSAQLEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAP 252
Query: 127 ---RYSLK-DGIPSFL-ANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLL-----SFG 176
++SL+ + +PS++ +A KIL G+ + + + V + +L +F
Sbjct: 253 SLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFE----NQNVNLTRKGSILKNQEDTFA 308
Query: 177 SNHHYL------------ECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDF 224
+ H L + V + L L+ E DL+G+L+ IK + LL +G+
Sbjct: 309 AELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGEL 368
Query: 225 LVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMA 284
F+D A+ L +T + + D L ++E +
Sbjct: 369 FQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKDHKAD 428
Query: 285 TLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHC 344
+ E+ S ++ E P S G LSYKVQWPL I+ + L KY +VF+ L
Sbjct: 429 ATQPREVP-SRETSPREAPSS--GWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSV 485
Query: 345 KHVERQLCGAWQVHQGARAFNASGTAISRSSLLCRSMLKF-INSLLHYLTFEVLEPNWHV 403
+ V+ +L W + + ++ T + L R+ + F +++L +YL +VLE +
Sbjct: 486 RRVQAELQHCWALQMQRKHLKSNQTDAVKWRL--RNHMAFLVDNLQYYLQVDVLESQFSQ 543
Query: 404 MHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLC 450
+ +++ + + + + HD FL L + + L + + + LC
Sbjct: 544 LLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLC 590
>sp|Q9UGJ1|GCP4_HUMAN Gamma-tubulin complex component 4 OS=Homo sapiens GN=TUBGCP4 PE=1
SV=1
Length = 667
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 198/496 (39%), Gaps = 62/496 (12%)
Query: 5 LEHQFRLG--RLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKAMA 62
LE +F LG LSI + ++ +V V+ + + G +L + +
Sbjct: 107 LEQEF-LGDPHLSISHVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQILETVYKHS--CG 163
Query: 63 GDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYD-- 120
G VRS LEK+ L W+ G++ D + EFFI + S S + D
Sbjct: 164 GLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEE 223
Query: 121 --------AKYWRQ------------------RYSLK-DGIPSFL-ANIAGKILTTGKYL 152
K R+ ++SL+ + +PS++ +A KIL G+ +
Sbjct: 224 DLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESV 283
Query: 153 NVMRECGHSAQVPTSENSKLL-----SFGSNHHYL------------ECVKVAYEFASGE 195
+ + V + +L +F + H L + V +
Sbjct: 284 QMFE----NQNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEH 339
Query: 196 LLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIA 255
L L+ E DL+G+L+ IK + LL +G+ F+D A+ L +T + +
Sbjct: 340 LWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQS 399
Query: 256 LRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLS 315
D L ++E + + E S ++ E P S G LS
Sbjct: 400 AHKVLLDDDNLLPLLHLTIEYHGKEHKADATQARE-GPSRETSPREAPAS--GWAALGLS 456
Query: 316 YKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTAISRSS 375
YKVQWPL I+ + L KY +VF+ L + V+ +L W + + ++ T +
Sbjct: 457 YKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWR 516
Query: 376 LLCRSMLKF-INSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 434
L R+ + F +++L +YL +VLE + + +++ + + + + HD FL L + +
Sbjct: 517 L--RNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFI 574
Query: 435 HLPDLLKKVERLKSLC 450
L + + + LC
Sbjct: 575 LLKPVFHCLNEILDLC 590
>sp|Q9VKU7|GCP4_DROME Gamma-tubulin complex component 4 homolog OS=Drosophila
melanogaster GN=Grip75 PE=1 SV=2
Length = 650
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 192/466 (41%), Gaps = 96/466 (20%)
Query: 25 PMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLG 84
P+L M+ + IH N G +L+ L Q + GD + ++ + + NA+
Sbjct: 124 PLLVFMRNLITEIHVL---NLRGCVLLHNLHQQCEH--GDIQLEKAIKIIMKPVKNAFFS 178
Query: 85 ILERWVYEGVIDDPYGEFFI------AEDKSLLKESLT----------QDYDAKYWRQRY 128
L W+ GVIDD + EFFI A D S +S T +DY W+
Sbjct: 179 SLAHWLLFGVIDDVHSEFFIKFTPTDAVDGSSFSKSATCSLLSAEKNPEDY---IWQYEV 235
Query: 129 SLKDGIPSFLANI-AGKILTTGKYLNVMRECGHSAQVPTSEN---SKLLSFGSNHHYL-- 182
++ +P F + + A K+L G+ + V + G + +V + +KL S+ Y
Sbjct: 236 NMSQ-LPGFFSIVLAEKVLFVGQTVLVFK-MGRNVKVKNKTDPLAAKLAELDSDDIYQLW 293
Query: 183 -----ECVKVAYEFASGELLNLIK---------------------ERYDLMGKLRSIKRY 216
E K+ + ++ + +N+ + DL ++ IK +
Sbjct: 294 SGRESEFFKMVVDLSNEDTINVFRLEKVIIDIKNYVSARLSEIAVNEVDLERQMGLIKDF 353
Query: 217 LLLDQGDFLVHF-------MDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHED 269
LL +G+F + F M+ REE K + RS AA
Sbjct: 354 FLLGRGEFYLEFCSQMVGTMETYREERFKNVT---------------RSFELAATVT--G 396
Query: 270 LTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRK 329
+T +++ SL+ + +T D+ D L+ SL Y+ +WPL+++ S
Sbjct: 397 ITDDLDKFSLICQRST------SEPDDTSDF------NFLQGLSLKYEYEWPLNLLFSPT 444
Query: 330 ALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTAISRSSLLCRSMLK-FINSL 388
+ +Y +FR L + + ++ W Q RA +A + + R+ L F+N++
Sbjct: 445 TIERYNNIFRFLLIIRTYQYEIQRVW-AKQTWRAKSAKDVPPNNKIITLRNYLMFFLNNM 503
Query: 389 LHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 434
+Y+ +VLE + ++ N +++ + + + H FL L C L
Sbjct: 504 QYYIQVDVLESQFGILMNVIKSRSDFEVIQRAHTVFLANVLSHCFL 549
>sp|P38863|SPC97_YEAST Spindle pole body component SPC97 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPC97 PE=1 SV=1
Length = 823
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 169/418 (40%), Gaps = 74/418 (17%)
Query: 47 GSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAE 106
G A+L + Q + GD + L+K+ S Y +L W+ +G+++DPY EF +
Sbjct: 244 GGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFMTYD 303
Query: 107 DKSLLKESL--TQD--YDAKYW-RQRYSLKDGIPSFLANIAGKILTTGKYLNVMRECGHS 161
D +++ T+D +D +Y+ R+ L+D N+ K+L TG L V+R S
Sbjct: 304 DLEGKTDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRA---S 360
Query: 162 AQVPT-SENSKLLSF-----------GSNHHYLEC-VKVAYEFASGELLNLIKERYDLMG 208
Q+PT NS ++ GSN LE V Y A+ L L + YDL+
Sbjct: 361 LQIPTIPSNSSDITIQEINDFADLMEGSN---LELYVDKCYSRANEIFLKLFFQGYDLIN 417
Query: 209 KLRSIK-------------RYLLLDQGDFLVHFM------------------------DI 231
L+ ++ ++L + G+ H+ ++
Sbjct: 418 VLKHLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNL 477
Query: 232 AREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEI 291
R+ LM Q D T+ ++ S + + + ++D + + ++ K M + E+
Sbjct: 478 MRQLLMIQFDTETLPQVLSHY-LQIYPEVPENNSANDD-SDPLMHANNFKNMNAILFDEL 535
Query: 292 KTSSDSV----DLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHV 347
+LE + + + +PL+I+ISR + KYQ++ R ++
Sbjct: 536 SKERTGAYHGSNLELYTPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQYH 595
Query: 348 ERQLCGAWQVHQGARAFNASGTA-------ISRSSLLCRSMLKFINSLLHYLTFEVLE 398
R L W ++ G + + + +L M FI +++ Y V++
Sbjct: 596 SRLLDETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFIKTIMEYFNQNVID 653
>sp|Q95K09|GCP5_MACFA Gamma-tubulin complex component 5 (Fragment) OS=Macaca fascicularis
GN=TUBGCP5 PE=2 SV=2
Length = 725
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 120/304 (39%), Gaps = 53/304 (17%)
Query: 178 NHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELM 237
+ YL+C G L+ +K+ Y L+ L++++ + L++ GD + F +
Sbjct: 397 DKQYLDCC--------GNLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFYT----SIF 444
Query: 238 KQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDS 297
++ E + S L++ L+ P E SS L + + V D+
Sbjct: 445 DKIREKETWQNVSFLNVQLQEAVGQRYP---------EDSSRLS--ISFENV------DT 487
Query: 298 VDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLC----- 352
+ PV I L+ +LSYKV WP+ IVIS + Y VF LL K + L
Sbjct: 488 AKKKLPVHI--LDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFG 545
Query: 353 -------------GAWQVHQGARAFNASGTA----ISRSSLLCRSMLKFINSLLHYLTFE 395
G + F I R LL ++ F+NSL +Y+
Sbjct: 546 ELVSTAEKPRLQEGLVREQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTR 605
Query: 396 VLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAA 455
+L ++++ AK +D++I+ H +L CLL K +K L L
Sbjct: 606 ILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMF 665
Query: 456 ATQW 459
A W
Sbjct: 666 ADGW 669
>sp|Q96RT8|GCP5_HUMAN Gamma-tubulin complex component 5 OS=Homo sapiens GN=TUBGCP5 PE=1
SV=1
Length = 1024
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 119/304 (39%), Gaps = 53/304 (17%)
Query: 178 NHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELM 237
+ YL+C G L+ +K+ Y L+ L++++ + L++ GD + F +
Sbjct: 696 DKQYLDCC--------GNLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFY----TSIF 743
Query: 238 KQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDS 297
++ E + S L++ L+ P E SS L + + V D+
Sbjct: 744 DKIREKETWQNVSFLNVQLQEAVGQRYP---------EDSSRLS--ISFENV------DT 786
Query: 298 VDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLC----- 352
+ PV I L+ +LSYKV WP+ IVIS + Y VF LL K + L
Sbjct: 787 AKKKLPVHI--LDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFG 844
Query: 353 -------------GAWQVHQGARAFNASGTA----ISRSSLLCRSMLKFINSLLHYLTFE 395
G F I R LL ++ F+NSL +Y+
Sbjct: 845 ELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTR 904
Query: 396 VLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAA 455
+L ++++ AK +D++I+ H +L CLL K +K L L
Sbjct: 905 ILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMF 964
Query: 456 ATQW 459
A W
Sbjct: 965 ADGW 968
>sp|Q8BKN5|GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2
SV=2
Length = 1024
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 53/304 (17%)
Query: 178 NHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELM 237
+ YL C G L+ +K + L+ L++++ + L++ GD + F +
Sbjct: 696 DKQYLHCC--------GNLMQTLKRDFRLVEYLQAMRNFFLMEGGDTMYDFY----TSIF 743
Query: 238 KQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDS 297
++ E + S L++ L+ P + L S+ ++ D+
Sbjct: 744 DKIREKETWQNVSFLNVQLQEAVGQRYP-EDSLRLSISFENV----------------DT 786
Query: 298 VDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVER-------- 349
+ PV I L+ +LSYKV WP+ IVIS + Y VF LL K +
Sbjct: 787 TKKKLPVHI--LDGLTLSYKVPWPVDIVISVECQKIYNQVFLLLLQIKWAKYSLDVLLFG 844
Query: 350 QLCGAWQVHQGARAFNASGTA--------------ISRSSLLCRSMLKFINSLLHYLTFE 395
+L A + Q I R LL ++ F+NSL +Y+
Sbjct: 845 ELGNAAERSQAKEDIPRDQDTPSQFGPPKESLRQQIHRMFLLRVKLMHFVNSLHNYIMTR 904
Query: 396 VLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAA 455
+L ++++ AK +D++I+ H +L CLL K +K L L
Sbjct: 905 ILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMF 964
Query: 456 ATQW 459
A W
Sbjct: 965 AEGW 968
>sp|Q96RT7|GCP6_HUMAN Gamma-tubulin complex component 6 OS=Homo sapiens GN=TUBGCP6 PE=1
SV=3
Length = 1819
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 46 TGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIA 105
TG +L+ L +A + LL + + + Y + WVY GV D YGEF I
Sbjct: 497 TGVKLLSYLYQEALHNCSNEHYPVLL-SLLKTSCEPYTRFIHDWVYSGVFRDAYGEFMIQ 555
Query: 106 EDKSLLKESLTQDYDAKYWRQRYSL-----KDGIPSFLANIAGKILTTGKYLNVMRECGH 160
+ L D YW Y L +D +P FL +IA I GK +N+++ C
Sbjct: 556 VNHEYLSFR-----DKLYWTHGYVLISKEVEDCVPVFLKHIAHDIYVCGKTINLLKLC-- 608
Query: 161 SAQVPTSENSKLLSFGSNHHYL-----ECVKVAYEFASGELLNLIKERYDLMGKLRSIKR 215
HYL +++ F+ EL + K+ +G++ + R
Sbjct: 609 ----------------CPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMERVAR 652
Query: 216 YLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLD 253
+ + + + + M+IA++EL+ E L +L D
Sbjct: 653 HSSVSKEEKELR-MEIAKQELIAHAREAASRVLSALSD 689
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 27/229 (11%)
Query: 212 SIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPC--HED 269
+++ +LL++ G+F D+ E+L + E L L+ L S + A C H D
Sbjct: 1519 ALRHFLLMEDGEFAQSLSDLLFEKLGA--GQTPGELLNPLV---LNSVLSKALQCSLHGD 1573
Query: 270 LTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRK 329
+ S LK + ++ P + L L YKV WPL+IVI+
Sbjct: 1574 TPHASNLSLALKYLP--------------EVFAPNAPDVLSCLELRYKVDWPLNIVITEG 1619
Query: 330 ALTKYQMVFRLLFHCKHVE---RQLCGAWQVHQGARAFNASGTAISRS-SLLCRSMLKFI 385
++KY VF L K + + +C + + + A + +G+ R L M F+
Sbjct: 1620 CVSKYSGVFSFLLQLKLMMWALKDVC--FHLKRTALLSHMAGSVQFRQLQLFKHEMQHFV 1677
Query: 386 NSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 434
+ Y+ ++L W RL T ++E+ + H +L K + LL
Sbjct: 1678 KVIQGYIANQILHVTWCEFRARLATVGDLEEIQRAHAEYLHKAVFRGLL 1726
>sp|P53540|SPC98_YEAST Spindle pole body component SPC98 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPC98 PE=1 SV=1
Length = 846
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 159/387 (41%), Gaps = 53/387 (13%)
Query: 51 LNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSL 110
LN+ +S GD T+R + + + Y L W+ +G++ YGEFFIAE+
Sbjct: 316 LNIFKSH-----GDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAEN--- 367
Query: 111 LKESLTQDYDAKYWRQRYSLKDGIPSFLAN-IAGKILTTGK-YLNVMRECGHSAQVPTSE 168
++ D D Y ++ +P+F+ +A KI GK Y+ + + C T+E
Sbjct: 368 -TDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQW--TNE 424
Query: 169 NSKLLSF--------GSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLD 220
SK G + ++ E + Y ++ +++ + ++K LL+
Sbjct: 425 FSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNILLMG 484
Query: 221 QGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLL 280
+ DF+ ++ A + L D + KL +L A V+ SSL
Sbjct: 485 KSDFMDALIEKANDILATPSDSLPNYKLTRVLQEA------------------VQLSSLR 526
Query: 281 KRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRK---ALTKYQMV 337
M + + + D+ L+ G + F+L Y + PLS+V++ +Y +
Sbjct: 527 HLMNSPRNSSVINGLDARVLDLGHGSVGWDVFTLDYILYPPLSLVLNVNRPFGRKEYLRI 586
Query: 338 FRLLFHCKH----VERQLCGAWQV---HQGARAFNASGTAI----SRSSLLCRSMLKFIN 386
F L+ K ++++ + + + R +N I SR S+L +F +
Sbjct: 587 FNFLWRFKKNNYFYQKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNS 646
Query: 387 SLLHYLTFEVLEPNWHVMHNRLQTAKS 413
+ Y ++E N+ M +LQ ++
Sbjct: 647 KMESYYLNCIIEENFKEMTRKLQRTEN 673
>sp|O67615|SRP54_AQUAE Signal recognition particle protein OS=Aquifex aeolicus (strain
VF5) GN=ffh PE=3 SV=1
Length = 454
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 126 QRYSLKDGIPSFLA-NIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSNHHYLEC 184
++ LK G F+ GK T GK N++++ GH V +++ + + E
Sbjct: 89 EKADLKKGTVLFVGLQGTGKTTTIGKIANLLKKGGHKVAVSSTDLRRPAAMLQLQRLAER 148
Query: 185 VKVA-YEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEI 243
V V YEF G I R K S+ YLLLD L H EELMK+L EI
Sbjct: 149 VGVPYYEFEEGLGAVEIARRAVKRAKEESVD-YLLLDTAGRL-H----VDEELMKELQEI 202
>sp|P30153|2AAA_HUMAN Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform OS=Homo sapiens GN=PPP2R1A PE=1 SV=4
Length = 589
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 36/244 (14%)
Query: 12 GRLSIQGLWFYCQPMLGSMQAVSAVIHKASAN------NFTGSAVLNLLQSQAKAMAGDN 65
R S GL+ C P + S AV A + + N A + L AK + DN
Sbjct: 143 SRTSACGLFSVCYPRVSS--AVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDN 200
Query: 66 TVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAED-KSLLKESLTQDYDAKYW 124
++ + AS+ + E ++ + ED ++L+ +L Q + K W
Sbjct: 201 VKSEIIPMFSNLASDEQDSV-RLLAVEACVN--IAQLLPQEDLEALVMPTLRQAAEDKSW 257
Query: 125 RQRYSLKDGIPSFLANIAGKILTTG---KYLNVMRECGHSAQVPTSENSKLLSFGSN--- 178
R RY + D + +I T + N+M++C A+V + + K+ F N
Sbjct: 258 RVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCENLSA 315
Query: 179 --------HHYLECVKV----AYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLV 226
L C+K A + L ++I ++GK +I+ L L FL
Sbjct: 316 DCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPL----FLA 371
Query: 227 HFMD 230
D
Sbjct: 372 QLKD 375
>sp|Q5A6K8|FEN1_CANAL Flap endonuclease 1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=RAD27 PE=3 SV=1
Length = 372
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 477 FSGSEKFKRLKLRSLSQVQKVMIRDATVTESILKFE-------REFNNE----LQSLG-P 524
G E KRL R +Q QK + D E +LKFE RE N E LQ +G P
Sbjct: 93 LKGGELEKRLLRREEAQKQKTALGDEGTVEEVLKFEKRLVRVTREQNEEAKKLLQLMGIP 152
Query: 525 ILSSSSQAEPYLTHLAQ 541
+ + +AE LA+
Sbjct: 153 CVDAPCEAEAQCAELAR 169
>sp|C4YLS2|FEN1_CANAW Flap endonuclease 1 OS=Candida albicans (strain WO-1) GN=RAD27 PE=3
SV=1
Length = 372
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 477 FSGSEKFKRLKLRSLSQVQKVMIRDATVTESILKFE-------REFNNE----LQSLG-P 524
G E KRL R +Q QK + D E +LKFE RE N E LQ +G P
Sbjct: 93 LKGGELEKRLLRREEAQKQKTALGDEGTVEEVLKFEKRLVRVTREQNEEAKKLLQLMGIP 152
Query: 525 ILSSSSQAEPYLTHLAQ 541
+ + +AE LA+
Sbjct: 153 CVDAPCEAEAQCAELAR 169
>sp|P54612|2AAA_PIG Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform OS=Sus scrofa GN=PPP2R1A PE=2 SV=2
Length = 589
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 36/244 (14%)
Query: 12 GRLSIQGLWFYCQPMLGSMQAVSAVIHKASAN------NFTGSAVLNLLQSQAKAMAGDN 65
R S GL+ C P + S AV A + + N A + L AK + DN
Sbjct: 143 SRTSACGLFSVCYPRVSS--AVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDN 200
Query: 66 TVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAED-KSLLKESLTQDYDAKYW 124
++ + AS+ + E ++ + ED ++L+ +L Q + K W
Sbjct: 201 VKSEIIPMFSNLASDEQDSV-RLLAVEACVN--IAQLLPQEDLEALVMPTLRQAAEDKSW 257
Query: 125 RQRYSLKDGIPSFLANIAGKILTTG---KYLNVMRECGHSAQVPTSENSKLLSFGSN--- 178
R RY + D + +I T + N+M++C A+V + + K+ F N
Sbjct: 258 RVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCENLSA 315
Query: 179 --------HHYLECVKV----AYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLV 226
L C+K A + L ++I ++GK +I+ L L FL
Sbjct: 316 DCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPL----FLA 371
Query: 227 HFMD 230
D
Sbjct: 372 QLKD 375
>sp|Q76MZ3|2AAA_MOUSE Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform OS=Mus musculus GN=Ppp2r1a PE=1 SV=3
Length = 589
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 36/244 (14%)
Query: 12 GRLSIQGLWFYCQPMLGSMQAVSAVIHKASAN------NFTGSAVLNLLQSQAKAMAGDN 65
R S GL+ C P + S AV A + + N A + L AK + DN
Sbjct: 143 SRTSACGLFSVCYPRVSS--AVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDN 200
Query: 66 TVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAED-KSLLKESLTQDYDAKYW 124
++ + AS+ + E ++ + ED ++L+ +L Q + K W
Sbjct: 201 VKSEIIPMFSNLASDEQDSV-RLLAVEACVN--IAQLLPQEDLEALVMPTLRQAAEDKSW 257
Query: 125 RQRYSLKDGIPSFLANIAGKILTTG---KYLNVMRECGHSAQVPTSENSKLLSFGSN--- 178
R RY + D + +I T + N+M++C A+V + + K+ F N
Sbjct: 258 RVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCENLSA 315
Query: 179 --------HHYLECVKV----AYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLV 226
L C+K A + L ++I ++GK +I+ L L FL
Sbjct: 316 DCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPL----FLA 371
Query: 227 HFMD 230
D
Sbjct: 372 QLKD 375
>sp|A5GFT6|TSH2_PIG Teashirt homolog 2 OS=Sus scrofa GN=TSHZ2 PE=2 SV=1
Length = 1035
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 25/196 (12%)
Query: 126 QRYSLKDGIPSFLANIAGKILTTGK--YLNVMRECGHSAQV-------PTSENSKL-LSF 175
Q+ LK+ +P+ I+ K++T K +V R C + P +N+ L LS
Sbjct: 302 QKVPLKEPVPT----ISSKMVTPAKKRVFDVNRPCSPDSTTGSFADPFPAPKNASLQLSS 357
Query: 176 GSNHHYLECVKVAYEFAS--GELLNLIK--ERYDLMGKLRSIKRYLLLDQGDFLVHFMDI 231
+ + Y ++F + ++L ++ +D + +L + ++ G FL
Sbjct: 358 NNRYGYQNGASYTWQFEACKSQILKCMECGSSHDTLQQLTT----HMMVTGHFLKVTSSA 413
Query: 232 AREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEI 291
+++ LD + VEK+QSL D + A + C+ + L + K E+
Sbjct: 414 SKKGKQLVLDPLAVEKMQSLSDAPSSDSLAPKPSSNSASDCTASTTELKRESKKEKPEEL 473
Query: 292 KTSS---DSVDLEQPV 304
+T S D E P+
Sbjct: 474 RTDEKVLKSEDYEDPL 489
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,276,423
Number of Sequences: 539616
Number of extensions: 7224848
Number of successful extensions: 18372
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 18279
Number of HSP's gapped (non-prelim): 54
length of query: 550
length of database: 191,569,459
effective HSP length: 123
effective length of query: 427
effective length of database: 125,196,691
effective search space: 53458987057
effective search space used: 53458987057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)