Citrus Sinensis ID: 008868

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
MFTPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCNYSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVINRESEEDDSLSLEGDPILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNIETEIGSNPLAVAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQRKFKSKT
ccccEEEEEEccccccccccccccEEEEcEEEccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccEEEEEcccccccccccccccccccccccHHHccccccccccHHHHHHHHcccccccccccccccccccEEEEEEEEcccccccccEEEcccccccHHHHcccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEccEEEEEEcccccEEEEcccEEcccccccccccHHHHHHHHHcccEEEEccccccccEEEHHHHcccccccccccccccEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccc
ccccEEEEEEEcccccccccccccHEHHHHHHccccccHcccccccccccccEccccccccccccccccEEEEEcccccccccccHHHHcccccccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHcccccHHHcccccccccccHHcccccccccEHHcccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHEEEcHcHHcccHHcccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEEcccccccccHHHHHHHHHcccEEEEEcccEEcEEEEEEHHcccHcccccEcccccEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEEccccccccccc
mftpvvvpfragnsvcdnptisthsdIKRLKLMSDTAGLLSNSVAKVSEKSVARAhencnysdlgnevGSVAVvvpeedkvggVSLLDMISenksnwgssddvinreseeddslslegdpildsscslsvasetsslcgedflsfeassevgtlssvdiekSICSVDIIakasdlpesnieteigsnplAVAVSLEeeigdgskqnsSSVVLQLAFEngvratvgrsvfevdyvplwgftsvcgrrpemedavatvpyfLKIPIQMLIGDQVFDGLSKRFSQQTAHffgvydghgglqvANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARvdaevggktnqepvapetvgSTAVVAIICASHIIvancgdsravlcrgkesmalsvdhkpnredEYARIEAAGGKVIQWNGHRVFGVLAMSRsigdrylkpwiipepevmflprareDECLILASDGLWDVMTNEEACELARKRILLWHKkngvtlatgrgegidPAAQAAAEYLSNRalqkgskdniSVVVVDLKAqrkfkskt
mftpvvvpfragnsvcdnptisthsdiKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCNYSDLGNEVGSVAVVVPEEDKVGGVSLLDMisenksnwgssddviNRESEEDDSLSLEGDPILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNIETEIGSNPLAVAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGgktnqepvapeTVGSTAVVAIICASHIIVANCGDSRAVLCRGKEsmalsvdhkpnrEDEYARIEAAggkviqwnGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNralqkgskdnisvVVVDLkaqrkfkskt
MFTPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCNYSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVINReseeddslsleGDPILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNIETEIGSNPLAVAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQRKFKSKT
****VVVPFRAGNSVCDN*TI********L*************************HENCNYSDLGNEVGSVAVVVPEEDKVGGVSLLDM***********************************************LCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKA*************************************VVLQLAFENGVRATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKT****VAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE***************YARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGI*********Y*************ISVVVVDL**********
**TPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNS****************************************V*****************************************************CG********************************************************************************************DYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELV**********HSCQEQWKKIFTSCFARVDAEVGGK*N*******TVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNG****TGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVD***********
MFTPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCNYSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVIN***********EGDPILDSSC**********LCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNIETEIGSNPLAVAVSLEEE*********SSVVLQLAFENGVRATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQRKFKSKT
*FTPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLS*****************CNYSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVINRESEEDDSLSLEGDPILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSS*DIE*SICSVDIIAKASDLPESNIETEIGSNPLAVAVSLEEEIG******************************VDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLS***VVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHK******************QA*AEYLSNRALQKGSKDNISVVVVDLKA********
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MFTPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCNYSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVINRESEEDDSLSLEGDPILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNIETEIGSNPLAVAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQRKFKSKT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query550 2.2.26 [Sep-21-2011]
Q9CAJ0511 Protein phosphatase 2C 16 yes no 0.885 0.953 0.510 1e-144
Q9LNP9511 Protein phosphatase 2C 7 no no 0.896 0.964 0.488 1e-135
Q0JLP9467 Probable protein phosphat yes no 0.594 0.700 0.686 1e-132
Q6L4R7445 Probable protein phosphat no no 0.589 0.728 0.663 1e-129
P49597434 Protein phosphatase 2C 56 no no 0.634 0.804 0.605 1e-120
O04719423 Protein phosphatase 2C 77 no no 0.698 0.907 0.574 1e-120
Q6L5H6387 Probable protein phosphat no no 0.585 0.832 0.581 1e-111
Q5SN75403 Probable protein phosphat no no 0.534 0.729 0.467 3e-70
Q9LNW3442 Protein phosphatase 2C 3 no no 0.523 0.651 0.437 5e-69
Q5N9N2414 Probable protein phosphat no no 0.518 0.688 0.430 1e-66
>sp|Q9CAJ0|P2C16_ARATH Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1 Back     alignment and function desciption
 Score =  511 bits (1317), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 281/550 (51%), Positives = 362/550 (65%), Gaps = 63/550 (11%)

Query: 11  AGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCNYSDLGNEVGS 70
           A N++C++  +    +I +LK ++D A LLS+S      +S       C   D       
Sbjct: 15  AANTMCESSPV----EITQLKNVTDAADLLSDS----ENQSFCNGGTECTMED------- 59

Query: 71  VAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVINRESEEDDSLSLEGDPILDSSCSLSV 130
               V E ++VG   LL  +S+ +S  GSS+                   + D    LSV
Sbjct: 60  ----VSELEEVGEQDLLKTLSDTRS--GSSN-------------------VFDEDDVLSV 94

Query: 131 ASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNIETEIGSNPLA 190
             + S++  E  L  +A SE+ +LS+  +E  I +  ++A A  + ES+IE ++ +  + 
Sbjct: 95  VEDNSAVISEGLLVVDAGSEL-SLSNTAME--IDNGRVLATAIIVGESSIE-QVPTAEVL 150

Query: 191 VAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFTSVCGRRPEME 250
           +A       G     N+S VV++L  EN      GRSV+E+D +PLWG  S+ G R EME
Sbjct: 151 IA-------GVNQDTNTSEVVIRLPDENSNHLVKGRSVYELDCIPLWGTVSIQGNRSEME 203

Query: 251 DAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTA 310
           DA A  P+FLK+PI+ML+GD   +G+S   +  T HFFGVYDGHGG +VA+YCRDR+H A
Sbjct: 204 DAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFA 261

Query: 311 FAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQ----------EPVA 360
            AEEIE +K+ L   +     Q QW K+FTSCF  VD E+ GK  +          E VA
Sbjct: 262 LAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVA 321

Query: 361 PETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGK 420
            ETVGSTAVVA++C+SHI+V+NCGDSRAVL RGKE+M LSVDHKP+REDEYARIE AGGK
Sbjct: 322 SETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGK 381

Query: 421 VIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNE 480
           VIQW G RVFGVLAMSRSIGDRYLKP++IPEPEV F+PR+REDECLILASDGLWDVM N+
Sbjct: 382 VIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQ 441

Query: 481 EACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDL 540
           E CE+AR+RIL+WHKKNG      RG+GIDPA QAAA+YLS  ALQKGSKDNIS++V+DL
Sbjct: 442 EVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDL 501

Query: 541 KAQRKFKSKT 550
           KAQRKFK++T
Sbjct: 502 KAQRKFKTRT 511
Key component and repressor of the abscisic acid (ABA) signaling pathway that regulates numerous ABA responses, such as stomatal closure, seed germination and inhibition of vegetative growth. Confers enhanced sensitivity to drought.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9LNP9|P2C07_ARATH Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2 Back     alignment and function description
>sp|Q0JLP9|P2C06_ORYSJ Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1 Back     alignment and function description
>sp|Q6L4R7|P2C53_ORYSJ Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1 Back     alignment and function description
>sp|P49597|P2C56_ARATH Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2 Back     alignment and function description
>sp|O04719|P2C77_ARATH Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1 Back     alignment and function description
>sp|Q6L5H6|P2C50_ORYSJ Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1 Back     alignment and function description
>sp|Q5SN75|P2C08_ORYSJ Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNW3|P2C03_ARATH Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q5N9N2|P2C09_ORYSJ Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query550
343887277630 protein phosphatase 2c [Citrus unshiu] 1.0 0.873 0.996 0.0
339777467548 abscisic acid insensitivity 1B [Populus 0.989 0.992 0.754 0.0
339777479548 abscisic acid insensitivity 1B [Populus 0.989 0.992 0.754 0.0
339777497548 abscisic acid insensitivity 1B [Populus 0.989 0.992 0.753 0.0
339777473548 abscisic acid insensitivity 1B [Populus 0.989 0.992 0.753 0.0
339777469548 abscisic acid insensitivity 1B [Populus 0.989 0.992 0.751 0.0
144225757538 abscisic insensitive 1B [Populus tremula 0.970 0.992 0.745 0.0
144225749538 abscisic insensitive 1B [Populus tremula 0.970 0.992 0.745 0.0
255550099550 protein phosphatase 2c, putative [Ricinu 0.990 0.990 0.751 0.0
144225721538 abscisic insensitive 1B [Populus tremula 0.970 0.992 0.744 0.0
>gi|343887277|dbj|BAK61823.1| protein phosphatase 2c [Citrus unshiu] Back     alignment and taxonomy information
 Score = 1125 bits (2910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/550 (99%), Positives = 549/550 (99%)

Query: 1   MFTPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCN 60
           MFTPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCN
Sbjct: 1   MFTPVVVPFRAGNSVCDNPTISTHSDIKRLKLMSDTAGLLSNSVAKVSEKSVARAHENCN 60

Query: 61  YSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVINRESEEDDSLSLEGDP 120
           YSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVINRESEEDDSLSLEGDP
Sbjct: 61  YSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVINRESEEDDSLSLEGDP 120

Query: 121 ILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNI 180
           ILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNI
Sbjct: 121 ILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNI 180

Query: 181 ETEIGSNPLAVAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFT 240
           ETEIGSNPLAVAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFT
Sbjct: 181 ETEIGSNPLAVAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFT 240

Query: 241 SVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVA 300
           SVCGRRPEMEDAVATVPYFLKIPIQMLIG QVFDGLSKRFSQQTAHFFGVYDGHGGLQVA
Sbjct: 241 SVCGRRPEMEDAVATVPYFLKIPIQMLIGSQVFDGLSKRFSQQTAHFFGVYDGHGGLQVA 300

Query: 301 NYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVA 360
           NYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVA
Sbjct: 301 NYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVA 360

Query: 361 PETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGK 420
           PETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGK
Sbjct: 361 PETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGK 420

Query: 421 VIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNE 480
           VIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNE
Sbjct: 421 VIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNE 480

Query: 481 EACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDL 540
           EACELARKRILLWHKKNGVTLATGRGEGI+PAAQAAAEYLSNRALQKGSKDNISVVVVDL
Sbjct: 481 EACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVVVVDL 540

Query: 541 KAQRKFKSKT 550
           KAQRKFKSKT
Sbjct: 541 KAQRKFKSKT 550

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|339777467|gb|AEK05571.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777475|gb|AEK05575.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777487|gb|AEK05581.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777489|gb|AEK05582.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777491|gb|AEK05583.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777493|gb|AEK05584.1| abscisic acid insensitivity 1B [Populus balsamifera] Back     alignment and taxonomy information
>gi|339777479|gb|AEK05577.1| abscisic acid insensitivity 1B [Populus balsamifera] Back     alignment and taxonomy information
>gi|339777497|gb|AEK05586.1| abscisic acid insensitivity 1B [Populus balsamifera] Back     alignment and taxonomy information
>gi|339777473|gb|AEK05574.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777477|gb|AEK05576.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777485|gb|AEK05580.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777495|gb|AEK05585.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777501|gb|AEK05588.1| abscisic acid insensitivity 1B [Populus balsamifera] Back     alignment and taxonomy information
>gi|339777469|gb|AEK05572.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777471|gb|AEK05573.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777481|gb|AEK05578.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777483|gb|AEK05579.1| abscisic acid insensitivity 1B [Populus balsamifera] gi|339777499|gb|AEK05587.1| abscisic acid insensitivity 1B [Populus balsamifera] Back     alignment and taxonomy information
>gi|144225757|emb|CAM84275.1| abscisic insensitive 1B [Populus tremula] Back     alignment and taxonomy information
>gi|144225749|emb|CAM84271.1| abscisic insensitive 1B [Populus tremula] Back     alignment and taxonomy information
>gi|255550099|ref|XP_002516100.1| protein phosphatase 2c, putative [Ricinus communis] gi|223544586|gb|EEF46102.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|144225721|emb|CAM84257.1| abscisic insensitive 1B [Populus tremula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query550
TAIR|locus:2030230511 HAB1 "AT1G72770" [Arabidopsis 0.758 0.816 0.579 1.4e-131
TAIR|locus:2007943511 HAB2 "homology to ABI2" [Arabi 0.738 0.794 0.564 4.6e-121
TAIR|locus:2164610423 ABI2 "AT5G57050" [Arabidopsis 0.698 0.907 0.584 8.7e-111
TAIR|locus:2005488434 ABI1 "ABA INSENSITIVE 1" [Arab 0.569 0.721 0.667 6.3e-110
TAIR|locus:2080787399 PP2CA "protein phosphatase 2CA 0.636 0.877 0.421 1.5e-60
TAIR|locus:2025087442 HAI2 "highly ABA-induced PP2C 0.5 0.622 0.459 7.8e-60
TAIR|locus:2043142362 HAI3 "highly ABA-induced PP2C 0.5 0.759 0.465 3.2e-58
TAIR|locus:2165371416 AHG1 "ABA-hypersensitive germi 0.532 0.704 0.430 3.7e-55
TAIR|locus:2168449413 HAI1 "highly ABA-induced PP2C 0.447 0.595 0.468 5.6e-52
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.303 0.450 0.412 8.1e-35
TAIR|locus:2030230 HAB1 "AT1G72770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1247 (444.0 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
 Identities = 255/440 (57%), Positives = 319/440 (72%)

Query:   121 ILDSSCSLSVASETSSLCGEDFLSFEASSEVGTLSSVDIEKSICSVDIIAKASDLPESNI 180
             + D    LSV  + S++  E  L  +A SE+ +LS+  +E  I +  ++A A  + ES+I
Sbjct:    85 VFDEDDVLSVVEDNSAVISEGLLVVDAGSEL-SLSNTAME--IDNGRVLATAIIVGESSI 141

Query:   181 ETEIGSNPLAVAVSLEEEIGDGSKQNSSSVVLQLAFENGVRATVGRSVFEVDYVPLWGFT 240
             E ++ +  + +A       G     N+S VV++L  EN      GRSV+E+D +PLWG  
Sbjct:   142 E-QVPTAEVLIA-------GVNQDTNTSEVVIRLPDENSNHLVKGRSVYELDCIPLWGTV 193

Query:   241 SVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVA 300
             S+ G R EMEDA A  P+FLK+PI+ML+GD   +G+S   +  T HFFGVYDGHGG +VA
Sbjct:   194 SIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTGHFFGVYDGHGGHKVA 251

Query:   301 NYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQ---- 356
             +YCRDR+H A AEEIE +K+ L   +     Q QW K+FTSCF  VD E+ GK  +    
Sbjct:   252 DYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVG 311

Query:   357 ------EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDE 410
                   E VA ETVGSTAVVA++C+SHI+V+NCGDSRAVL RGKE+M LSVDHKP+REDE
Sbjct:   312 SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDE 371

Query:   411 YARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILAS 470
             YARIE AGGKVIQW G RVFGVLAMSRSIGDRYLKP++IPEPEV F+PR+REDECLILAS
Sbjct:   372 YARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILAS 431

Query:   471 DGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSK 530
             DGLWDVM N+E CE+AR+RIL+WHKKNG      RG+GIDPA QAAA+YLS  ALQKGSK
Sbjct:   432 DGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSK 491

Query:   531 DNISVVVVDLKAQRKFKSKT 550
             DNIS++V+DLKAQRKFK++T
Sbjct:   492 DNISIIVIDLKAQRKFKTRT 511
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS;IDA
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0005515 "protein binding" evidence=IPI
GO:0009610 "response to symbiotic fungus" evidence=RCA
GO:0010029 "regulation of seed germination" evidence=RCA
TAIR|locus:2007943 HAB2 "homology to ABI2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164610 ABI2 "AT5G57050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005488 ABI1 "ABA INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080787 PP2CA "protein phosphatase 2CA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025087 HAI2 "highly ABA-induced PP2C gene 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043142 HAI3 "highly ABA-induced PP2C gene 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165371 AHG1 "ABA-hypersensitive germination 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168449 HAI1 "highly ABA-induced PP2C gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9CAJ0P2C16_ARATH3, ., 1, ., 3, ., 1, 60.51090.88540.9530yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.946
3rd Layer3.1.30.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00032224001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (502 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query550
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 6e-84
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-80
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-60
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-36
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-33
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-25
PRK14559645 PRK14559, PRK14559, putative protein serine/threon 0.001
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  261 bits (668), Expect = 6e-84
 Identities = 106/303 (34%), Positives = 148/303 (48%), Gaps = 52/303 (17%)

Query: 238 GFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGL 297
           G +   G R   EDAV   P                       + +    FGV+DGHGG 
Sbjct: 4   GVSDKGGDRKTNEDAVVIKP---------------------NLNNEDGGLFGVFDGHGGH 42

Query: 298 QVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQE 357
               +    +     EE+E               +E  ++     F R D E+  +  Q+
Sbjct: 43  AAGEFASKLLVEELLEELEETLT---------LSEEDIEEALRKAFLRADEEILEE-AQD 92

Query: 358 PVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAA 417
                  G+TAVVA+I  + + VAN GDSRAVLCR  E++ L+ DHKP  E+E  RIE A
Sbjct: 93  EPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKA 152

Query: 418 GGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVM 477
           GG+V      RV GVLA++R++GD  LKP +  EP+V  +    +D+ LILASDGLWDV+
Sbjct: 153 GGRVSNG---RVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVL 209

Query: 478 TNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVV 537
           +N+EA ++ R  +                       Q AA+ L + AL++GS DNI+VVV
Sbjct: 210 SNQEAVDIVRSELA------------------KEDLQEAAQELVDLALRRGSHDNITVVV 251

Query: 538 VDL 540
           V L
Sbjct: 252 VRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|237756 PRK14559, PRK14559, putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 550
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.95
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.86
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.84
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.77
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.67
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.48
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.21
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.67
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.7e-48  Score=405.07  Aligned_cols=262  Identities=33%  Similarity=0.529  Sum_probs=217.9

Q ss_pred             ceEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHH
Q 008868          235 PLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEE  314 (550)
Q Consensus       235 ~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~  314 (550)
                      ..+|..|++|.|+.|||+|++..++.+.-           + ..........||||||||||+.+|++|++++++.|.+.
T Consensus        65 ~~~~~~s~~G~R~~nED~~~~~~~~~~~~-----------~-~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~  132 (365)
T PLN03145         65 VRSGAWADIGSRSSMEDVYICVDNFMSDF-----------G-LKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVED  132 (365)
T ss_pred             eEEEEEccccCCCCCCCceEecccccccc-----------c-ccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence            35789999999999999998866542100           0 00011234689999999999999999999999998753


Q ss_pred             HHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecCC
Q 008868          315 IELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGK  394 (550)
Q Consensus       315 l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~g  394 (550)
                      ..              ....+.++|.++|.++|+++.+.....  ....+|||++++++.++++||||+||||+|++|++
T Consensus       133 ~~--------------~~~~~~~al~~af~~~d~~~~~~~~~~--~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g  196 (365)
T PLN03145        133 ED--------------FPREIEKVVSSAFLQTDTAFAEACSLD--ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG  196 (365)
T ss_pred             hc--------------cchhHHHHHHHHHHHHhHHHHhhhccc--cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC
Confidence            21              122467889999999999987643222  22359999999999999999999999999999999


Q ss_pred             eeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCC-------CCcccceEEEEeccCCCeEEE
Q 008868          395 ESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKP-------WIIPEPEVMFLPRAREDECLI  467 (550)
Q Consensus       395 ~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~-------~v~~~Pdi~~~~l~~~D~fLI  467 (550)
                      ++++||+||++.++.|++||.+.||.+.   .+|+.|.+++||+|||..+|.       .++++|++..+++.++|+|||
T Consensus       197 ~~~~LT~DH~~~~~~E~~RI~~~Gg~v~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLI  273 (365)
T PLN03145        197 KAIEMSRDHKPMCSKERKRIEASGGYVY---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLI  273 (365)
T ss_pred             eEEEecCCCCCCCHHHHHHHHHcCCcee---cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEE
Confidence            9999999999999999999999999885   358899999999999987763       478999999999999999999


Q ss_pred             EecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEeccCC
Q 008868          468 LASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQR  544 (550)
Q Consensus       468 LaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~~~~  544 (550)
                      ||||||||+|++++++++++..+..                 ..+++.+|+.|++.|+++|+.||||||||+|....
T Consensus       274 LaSDGLwdvls~ee~v~~i~~~l~~-----------------~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~  333 (365)
T PLN03145        274 IGCDGIWDVFRSQNAVDFARRRLQE-----------------HNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQP  333 (365)
T ss_pred             EeCCccccCcCHHHHHHHHHHHHhc-----------------CCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCC
Confidence            9999999999999999998775421                 23578999999999999999999999999998743

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query550
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 1e-135
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-135
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-134
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-134
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-134
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-128
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 1e-120
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-120
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-120
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-117
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-34
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 1e-31
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 1e-31
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-27
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-25
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 2e-24
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 6e-12
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 4e-10
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 9e-09
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-08
2j4o_A401 Structure Of Tab1 Length = 401 2e-07
2pom_A372 Tab1 With Manganese Ion Length = 372 3e-07
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 5e-07
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 5e-06
3d8k_A377 Crsytal Structure Of A Phosphatase From A Toxoplasm 8e-04
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure 
Iteration: 1

 Score =  479 bits (1232), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 227/336 (67%), Positives = 269/336 (80%), Gaps = 12/336 (3%)
Query: 225 GRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQT 284
           GRSV+E+D +PLWG  S+ G R EMEDA A  P+FLK+PI+ML+GD   +G+S   +  T
Sbjct: 7   GRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLT 64
Query: 285 AHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFA 344
            HFFGVYDGHGG +VA+YCRDR+H A AEEIE +K+ LS  +     Q QW K+FTSCF 
Sbjct: 65  GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFL 124
Query: 345 RVDAEVGGKTNQ----------EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGK 394
            VD E+ GK  +          E VA ETVGSTAVVA++C+SHI+V+NCGDSRAVL RGK
Sbjct: 125 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 184
Query: 395 ESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEV 454
           E+M LSVDHKP+REDEYARIE AGGKVIQW G RVFGVLAMSRSIGDRYLKP++IPEPEV
Sbjct: 185 EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEV 244
Query: 455 MFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQ 514
            F+PR+REDECLILASDGLWDVM N+E CE+AR+RIL+WHKKNG      RG+GIDPA Q
Sbjct: 245 TFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQ 304
Query: 515 AAAEYLSNRALQKGSKDNISVVVVDLKAQRKFKSKT 550
           AAA+YLS  ALQKGSKDNIS++V+DLKAQRKFK++T
Sbjct: 305 AAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 340
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma Gondii Length = 377 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query550
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-145
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-136
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-109
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-106
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-105
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-102
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-101
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 7e-99
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-85
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 9e-79
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 3e-76
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 8e-74
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-46
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-15
1txo_A237 Putative bacterial enzyme; serine/threonine protei 9e-15
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 1e-13
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 8e-13
3rnr_A211 Stage II sporulation E family protein; structural 5e-12
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
 Score =  419 bits (1079), Expect = e-145
 Identities = 226/339 (66%), Positives = 269/339 (79%), Gaps = 12/339 (3%)

Query: 222 ATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFS 281
             +GRSV+E+D +PLWG  S+ G R EMEDA A  P+FLK+PI+ML+GD   +G+S   +
Sbjct: 1   GAMGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLT 58

Query: 282 QQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTS 341
             T HFFGVYDGHGG +VA+YCRDR+H A AEEIE +K+ L   +     Q QW K+FTS
Sbjct: 59  HLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTS 118

Query: 342 CFARVDAEVGGKTNQ----------EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLC 391
           CF  VD E+ GK  +          E VA ETVGSTAVVA++C+SHI+V+NCGDSRAVL 
Sbjct: 119 CFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 178

Query: 392 RGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPE 451
           RGKE+M LSVDHKP+REDEYARIE AGGKVIQW G RVFGVLAMSRSIGDRYLKP++IPE
Sbjct: 179 RGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPE 238

Query: 452 PEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDP 511
           PEV F+PR+REDECLILASDGLWDVM N+E CE+AR+RIL+WHKKNG      RG+GIDP
Sbjct: 239 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP 298

Query: 512 AAQAAAEYLSNRALQKGSKDNISVVVVDLKAQRKFKSKT 550
           A QAAA+YLS  ALQKGSKDNIS++V+DLKAQRKFK++T
Sbjct: 299 ACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 337
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query550
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.81
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.79
3f79_A255 Probable two-component response regulator; adaptor 99.64
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.58
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 98.94
3eq2_A394 Probable two-component response regulator; adaptor 97.88
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=1e-58  Score=483.52  Aligned_cols=326  Identities=69%  Similarity=1.164  Sum_probs=262.8

Q ss_pred             CCCCceeeecccceEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHH
Q 008868          223 TVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANY  302 (550)
Q Consensus       223 ~~~rs~~~~~~~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~  302 (550)
                      +..|++|++++.+.||++|++|+|++|||++.+.++|.+.|..++.++.  ++...........||+|||||||+.+|++
T Consensus         2 ~~~~~~~~~~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~--~g~~~~~~~~~~~l~~V~DGhGG~~~~~~   79 (337)
T 3qn1_B            2 AMGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTGHFFGVYDGHGGHKVADY   79 (337)
T ss_dssp             ---------CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC------------CEEEEEEEEEEEEESSSHHHHH
T ss_pred             CcccchhhhcccCceEEEEeeeCCchhhhHHHHHhhhhcccchhccccc--ccccccccCCCeEEEEEEeCCCChhHHHH
Confidence            4578999999999999999999999999999999998888877777664  33333333446889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCC----------CCCCCCCCCCcceEEEE
Q 008868          303 CRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTN----------QEPVAPETVGSTAVVAI  372 (550)
Q Consensus       303 As~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~----------~~~~~~~~~GTTavval  372 (550)
                      |+++++..|.+.+......+............++++|+++|.++|+++.....          ........+|||+++++
T Consensus        80 as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~  159 (337)
T 3qn1_B           80 CRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVAL  159 (337)
T ss_dssp             HHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEE
T ss_pred             HHHHHHHHHHHHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEE
Confidence            99999999999876654332222222233467899999999999999987541          22334467999999999


Q ss_pred             EeCCEEEEeeeCCceEEEecCCeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcccc
Q 008868          373 ICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEP  452 (550)
Q Consensus       373 i~~~~l~vAnVGDSRayL~r~g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~~v~~~P  452 (550)
                      +.++++|+|||||||+|++|+|++++||+||++.++.|+.||...+|.+..|.+.|+.|.+++||+||+..+|++++++|
T Consensus       160 i~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~p  239 (337)
T 3qn1_B          160 VCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEP  239 (337)
T ss_dssp             ECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCC
T ss_pred             EECCEEEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 008868          453 EVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDN  532 (550)
Q Consensus       453 di~~~~l~~~D~fLILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DN  532 (550)
                      ++..+.+.+.++|||||||||||+|+++||+++++..+..|.++++......++.+...+++.+|+.|++.|+.+|+.||
T Consensus       240 dv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DN  319 (337)
T 3qn1_B          240 EVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDN  319 (337)
T ss_dssp             EEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSC
T ss_pred             eEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCC
Confidence            99999988889999999999999999999999999988889888887766666666678899999999999999999999


Q ss_pred             eEEEEEEeccCCccCCCC
Q 008868          533 ISVVVVDLKAQRKFKSKT  550 (550)
Q Consensus       533 iTVIVV~l~~~~~~k~k~  550 (550)
                      ||||||+|+.++++|.|+
T Consensus       320 iTvivv~l~~~~~~~~~~  337 (337)
T 3qn1_B          320 ISIIVIDLKAQRKFKTRT  337 (337)
T ss_dssp             EEEEEEECCSCC------
T ss_pred             EEEEEEEecCCcccccCC
Confidence            999999999999999875
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 550
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 4e-50
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 4e-30
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (436), Expect = 4e-50
 Identities = 95/319 (29%), Positives = 138/319 (43%), Gaps = 56/319 (17%)

Query: 237 WGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGG 296
           +G +S+ G R EMEDA   V                          ++  FF VYDGH G
Sbjct: 23  YGLSSMQGWRVEMEDAHTAVIGLPS-------------------GLESWSFFAVYDGHAG 63

Query: 297 LQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQ 356
            QVA YC + +        +      +         E  K    + F  +D  +    ++
Sbjct: 64  SQVAKYCCEHLLDHITNNQDFKGSAGAP------SVENVKNGIRTGFLEIDEHMR-VMSE 116

Query: 357 EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEA 416
           +    +  GSTAV  +I   H    NCGDSR +LCR ++    + DHKP+   E  RI+ 
Sbjct: 117 KKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQN 176

Query: 417 AGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRARE-DECL 466
           AGG        RV G LA+SR++GD   K           + PEPEV  + R+ E D+ +
Sbjct: 177 AGGS---VMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFI 233

Query: 467 ILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQ 526
           ILA DG+WDVM NEE C+  R R+ +                     +     + +  L 
Sbjct: 234 ILACDGIWDVMGNEELCDFVRSRLEV-----------------TDDLEKVCNEVVDTCLY 276

Query: 527 KGSKDNISVVVVDLKAQRK 545
           KGS+DN+SV+++      K
Sbjct: 277 KGSRDNMSVILICFPNAPK 295
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query550
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-51  Score=414.98  Aligned_cols=266  Identities=36%  Similarity=0.579  Sum_probs=225.2

Q ss_pred             cceEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHH
Q 008868          234 VPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAE  313 (550)
Q Consensus       234 ~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~  313 (550)
                      ...||+++++|+|++|||++.+.+++..                   ...+..||||||||||+.++++|+++++..|.+
T Consensus        20 ~~~~g~~s~~G~R~~~ED~~~~~~~~~~-------------------~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~   80 (295)
T d1a6qa2          20 GLRYGLSSMQGWRVEMEDAHTAVIGLPS-------------------GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN   80 (295)
T ss_dssp             TEEEEEEEEEETSSSCCEEEEEEEEETT-------------------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEeCccCCCcccCeeEEEcccCC-------------------CCCceEEEEEEeCCCChHHHHHHHHHHHHHHHH
Confidence            3479999999999999999988765421                   113578999999999999999999999999987


Q ss_pred             HHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecC
Q 008868          314 EIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRG  393 (550)
Q Consensus       314 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~  393 (550)
                      .+......      .....+.+.++|+++|.++++.+...... ......+|||++++++.++++|+||+||||+|++|+
T Consensus        81 ~~~~~~~~------~~~~~~~~~~al~~a~~~~~~~~~~~~~~-~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~  153 (295)
T d1a6qa2          81 NQDFKGSA------GAPSVENVKNGIRTGFLEIDEHMRVMSEK-KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRN  153 (295)
T ss_dssp             SHHHHCSS------SSCCHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEET
T ss_pred             hhhhcccc------ccchHHHHHHHHHHHHHHHHHHHhhhhhh-ccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeec
Confidence            65443221      22345667889999999999887543211 123457999999999999999999999999999999


Q ss_pred             CeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccC---------CCCcccceEEEEecc-CCC
Q 008868          394 KESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRA-RED  463 (550)
Q Consensus       394 g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk---------~~v~~~Pdi~~~~l~-~~D  463 (550)
                      +++++||.||++.++.|+.||...||.+..   .|+.|.+++||+|||..+|         ++++++|++..+.+. ++|
T Consensus       154 ~~~~~lT~dH~~~~~~E~~Ri~~~gg~v~~---~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~  230 (295)
T d1a6qa2         154 RKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDD  230 (295)
T ss_dssp             TEEEEECCCCCTTSHHHHHHHHHTTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTE
T ss_pred             ccceeeccccCcccHHHHhhHhhcCCcccc---cccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccc
Confidence            999999999999999999999999999864   6899999999999999887         359999999999875 567


Q ss_pred             eEEEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEeccC
Q 008868          464 ECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQ  543 (550)
Q Consensus       464 ~fLILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~~~  543 (550)
                      +|||||||||||+|+++|++++++..+..                 ..+++.+|+.|++.|+.+|+.||||||||+|++.
T Consensus       231 ~flvL~SDGl~d~l~~~ei~~~v~~~~~~-----------------~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~  293 (295)
T d1a6qa2         231 QFIILACDGIWDVMGNEELCDFVRSRLEV-----------------TDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA  293 (295)
T ss_dssp             EEEEEECHHHHTTSCHHHHHHHHHHHHTT-----------------CCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTS
T ss_pred             eeEeeecCcccccCCHHHHHHHHHHHhhc-----------------CCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCC
Confidence            79999999999999999999999875421                 3568999999999999999999999999999865


Q ss_pred             Cc
Q 008868          544 RK  545 (550)
Q Consensus       544 ~~  545 (550)
                      .|
T Consensus       294 ~k  295 (295)
T d1a6qa2         294 PK  295 (295)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure