BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008869
(550 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMV0|FBL91_ARATH F-box/LRR-repeat protein At5g63520 OS=Arabidopsis thaliana
GN=At5g63520 PE=2 SV=1
Length = 529
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/559 (43%), Positives = 330/559 (59%), Gaps = 53/559 (9%)
Query: 1 MDTEKPSSSKKKKKT-----IEISSLADCEDVLHNILSRLPAKSFASAACVNKSWNCVCN 55
M T+ S + KK KT + I+++ ED+LHNIL RLPAKSFA A+CVN+ W+ VCN
Sbjct: 11 MTTKGKSENSKKMKTDMADMVPIAAMN--EDLLHNILLRLPAKSFAFASCVNRFWSSVCN 68
Query: 56 SILSRPRIASACSFKASAPIALQEVLDKVLLEPIRPHFAIANVGRGFNMRRTLDFLVKHL 115
ILSRP++ SA S A +EVLDKVL EPIRP F IAN+ G NM TL + + +
Sbjct: 69 RILSRPKMISAFSRNPDQLRAGEEVLDKVLSEPIRPQFVIANITCG-NMEETLTLITERV 127
Query: 116 GLRTPIILSVVHGVMGRDALTDEFREVKFQ---DHEDIGVNRGICTCGQQSGIVLTVGYL 172
G R PII+SVV G++G++A D+ EV+ D E V I+LT+GYL
Sbjct: 128 GSRVPIIVSVVTGILGKEACNDKAGEVRLHSTSDDELFDV--------ANFAILLTIGYL 179
Query: 173 PGLKVDAIPLLRRKEVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSG-CASPVGIIM 231
PG+KVD IP+++ K M D+FVMDI+NY + VSG A+P +I+
Sbjct: 180 PGMKVDIIPVIQAKG------------ESGAEMEDKFVMDIRNYMSMVSGHAAAPACLIL 227
Query: 232 FGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFA 291
F ++ +P++ KLDYAM TV VG + F ++ G++ RNV I L+FA
Sbjct: 228 FAEDTHATEPVLHKLDYAMPAETVIVGGQIGEFLHKRGNEPRNVQLQKDDIRVLAGLIFA 287
Query: 292 SDKDKPHGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEG--STWLTAKREGHHVILDG 349
D+ +P IQF A+S G+S++ R+KA +V + ST LTAKR G +LDG
Sbjct: 288 RDRHRPAQAERIQFDTAISNGMSSVDLRYKAANVNVSLGPSCPSTLLTAKRRGEAEVLDG 347
Query: 350 EQILRHIDQ-LENRFPQVELYVGVTKRRKCSIG-SEKSRLITTLAFHGIRGGDQEYLYVD 407
+QIL ID LEN + + Y+GV KRRK SIG EK +++++L FH + G D + L VD
Sbjct: 348 DQILDDIDNILENYIWENDSYLGVIKRRKYSIGLEEKPKIMSSLVFHQVNGSDDQDLLVD 407
Query: 408 GVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLG 467
G GIKTGD FQ Y PD A AA + S +RNLK + ++ EV+G
Sbjct: 408 GAGIKTGDQFQVYLPDLKVAEAALNDVSAQLRNLK---------------SKPNKPEVVG 452
Query: 468 GFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQEESPA 527
GF F RG+SFFG N DS PF ENFP P GIFC GEIGR + G+E +E S
Sbjct: 453 GFAFVGSCRGDSFFGCPNADSSPFLENFPELPFGGIFCDGEIGRSLILEEGEEKKEVSI- 511
Query: 528 ERRYLHVYSTAYLVISYSA 546
+R+LHVYS+ YL++SY++
Sbjct: 512 -QRFLHVYSSVYLIVSYTS 529
>sp|Q78JE5|FBX22_MOUSE F-box only protein 22 OS=Mus musculus GN=Fbxo22 PE=2 SV=2
Length = 402
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 468 GFIFSCCGRGNSFF---GGLNVDSFPFFENFPSAPLAGIFCGGEIG 510
GF+F+C GRG ++ G + D+F F FPS PL G F GEIG
Sbjct: 320 GFMFACVGRGFQYYRAKGNVEADAFRKF--FPSVPLFGFFGNGEIG 363
>sp|Q5RE08|FBX22_PONAB F-box only protein 22 OS=Pongo abelii GN=FBXO22 PE=2 SV=1
Length = 403
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 468 GFIFSCCGRGNSFF---GGLNVDSFPFFENFPSAPLAGIFCGGEIG 510
GF+F+C GRG ++ G + D+F F FPS PL G F GEIG
Sbjct: 321 GFMFACVGRGFQYYRAKGNVEADAFRKF--FPSVPLFGFFGNGEIG 364
>sp|Q8NEZ5|FBX22_HUMAN F-box only protein 22 OS=Homo sapiens GN=FBXO22 PE=1 SV=1
Length = 403
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 468 GFIFSCCGRGNSFF---GGLNVDSFPFFENFPSAPLAGIFCGGEIG 510
GF+F+C GRG ++ G + D+F F FPS PL G F GEIG
Sbjct: 321 GFMFACVGRGFQYYRAKGNVEADAFRKF--FPSVPLFGFFGNGEIG 364
>sp|Q3ECQ9|FB349_ARATH Probable F-box protein At1g53815 OS=Arabidopsis thaliana
GN=At1g53815 PE=4 SV=1
Length = 237
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 3 TEKPSSSKKKKKTIEISSLADCEDVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPR 62
+ KPSS+ K IE L + + NILSRLP KS A CV+K W +SI+ RP
Sbjct: 18 SNKPSSTPGKD--IEYFGLIPVDLFISNILSRLPLKSKAKCRCVSKLW----SSIIRRPN 71
Query: 63 IASACSFKASAPIAL 77
K+ AP L
Sbjct: 72 YNQLFPIKSPAPRIL 86
>sp|Q9FHP3|FB300_ARATH F-box protein At5g65850 OS=Arabidopsis thaliana GN=At5g65850 PE=2
SV=1
Length = 392
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 15/75 (20%)
Query: 3 TEKPSSSKKKKKTIEISSLADCEDVLHNILSRLPAKSFASAACVNKSW-NCVCNS----- 56
TEK +S K +K+++I D++ IL RLPAKS A+ CV+K W + +C
Sbjct: 20 TEKKTSPNKTEKSVQIPV-----DIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTEL 74
Query: 57 ----ILSRPRIASAC 67
L RP++ C
Sbjct: 75 FLTRSLHRPQLLFCC 89
>sp|P64730|Y644_MYCBO Uncharacterized protein Mb0644c OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb0644c PE=4 SV=1
Length = 383
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 466 LGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIG 510
+GG +F+C GRG FG + D+ + PLAG F GEIG
Sbjct: 319 VGGLLFTCNGRGRRMFGVTDHDASTIEDLLGGIPLAGFFAAGEIG 363
>sp|P64729|Y628_MYCTU Uncharacterized protein Rv0628c/MT0656 OS=Mycobacterium
tuberculosis GN=Rv0628c PE=4 SV=1
Length = 383
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 466 LGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIG 510
+GG +F+C GRG FG + D+ + PLAG F GEIG
Sbjct: 319 VGGLLFTCNGRGRRMFGVTDHDASTIEDLLGGIPLAGFFAAGEIG 363
>sp|Q9LUB6|SNE_ARATH F-box protein SNE OS=Arabidopsis thaliana GN=SNE PE=1 SV=1
Length = 157
Score = 40.0 bits (92), Expect = 0.044, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 4 EKPSSSKKKKKTIEISSLADCEDVLHNILSRLPAKSFASAACVNKSWNCV 53
EK ++ +++ + + S+ D DVL IL RL S SAACV + W+ V
Sbjct: 11 EKSNNKRQRVNQVPVFSINDHHDVLVEILRRLDGSSLCSAACVCRLWSAV 60
>sp|P0A5D4|Y898_MYCBO Uncharacterized protein Mb0898c OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb0898c PE=4 SV=1
Length = 386
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 467 GGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIG 510
G +F+C GRG FG + D+ E PLAG F GEIG
Sbjct: 320 GALLFTCNGRGRRMFGVADHDASTIEELLGGIPLAGFFAAGEIG 363
>sp|P0A5D3|Y874_MYCTU Uncharacterized protein Rv0874c/MT0897 OS=Mycobacterium
tuberculosis GN=Rv0874c PE=4 SV=1
Length = 386
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 467 GGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIG 510
G +F+C GRG FG + D+ E PLAG F GEIG
Sbjct: 320 GALLFTCNGRGRRMFGVADHDASTIEELLGGIPLAGFFAAGEIG 363
>sp|Q0WQM8|FB58_ARATH F-box protein At1g53790 OS=Arabidopsis thaliana GN=At1g53790 PE=2
SV=1
Length = 444
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRP 61
D+L +I SR+PAKS A CV+K W SIL RP
Sbjct: 85 DLLMDIFSRVPAKSIARFRCVSKLW----ESILCRP 116
>sp|Q9C629|FB35_ARATH Putative F-box protein At1g46840 OS=Arabidopsis thaliana
GN=At1g46840 PE=4 SV=1
Length = 475
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 10/54 (18%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCV----------CNSILSRPRIASACSF 69
D++ ILSRL AKS A CV+K WN + S LSRPRI F
Sbjct: 34 DLVIEILSRLSAKSIAICRCVSKQWNSLLVSQDFVESFLRSSLSRPRIWFTFRF 87
>sp|P0C2C9|FBX12_ARATH F-box only protein 12 OS=Arabidopsis thaliana GN=FBX12 PE=2 SV=1
Length = 404
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCV 53
D+++ ILSRLPAKS A CV+K W +
Sbjct: 8 DLIYEILSRLPAKSVARCRCVSKRWRSI 35
>sp|Q3EBI7|FB130_ARATH F-box protein At2g40910 OS=Arabidopsis thaliana GN=At2g40910 PE=2
SV=1
Length = 449
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 7 SSSKKKKKTIEISSLADCEDVLHNILSRLPAKSFASAACVNKSWNCV------CNSILS 59
S+ +++K T EI D+L I+ RLPAKS C++K W+ + CNS+ +
Sbjct: 58 STRERRKYTCEIPP-----DLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFT 111
>sp|Q9LV12|FB299_ARATH Putative F-box protein At5g62660 OS=Arabidopsis thaliana
GN=At5g62660 PE=4 SV=1
Length = 379
Score = 36.2 bits (82), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASAP 74
D+L IL++LPAKS CV+K W S L R R S C P
Sbjct: 44 DLLIEILTKLPAKSLMRFKCVSKLW-----SSLIRSRFFSNCYLTVKTP 87
>sp|Q58D55|BGAL_BOVIN Beta-galactosidase OS=Bos taurus GN=GLB1 PE=2 SV=1
Length = 653
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 139 FREVKFQDH--EDI------GVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEVPV 190
F + +F DH ED+ GVN + CG G+ TV + PG + A +L+RK P
Sbjct: 201 FLQKRFHDHLGEDVLLFTTDGVNERLLQCGALQGLYATVDFSPGTNLTAAFMLQRKFEPT 260
>sp|Q9C6J2|FB53_ARATH Putative F-box protein At1g50880 OS=Arabidopsis thaliana
GN=At1g50880 PE=4 SV=1
Length = 279
Score = 35.8 bits (81), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASAPIALQEVLDKVL 85
DV IL++LPAKS A CV+K W +SI + P S K S+ L +
Sbjct: 28 DVTSKILAKLPAKSVLRARCVSKQW----SSISTDPYFISNMFPKQSSSSLL------IF 77
Query: 86 LEPIRPHFAIA 96
+P R F I+
Sbjct: 78 FKPKRKLFVIS 88
>sp|Q9ZQF0|FB104_ARATH F-box protein At2g15640 OS=Arabidopsis thaliana GN=At2g15640 PE=2
SV=1
Length = 426
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASAPIALQEVLDK 83
D+ ILSRLPAKS A CV+K W + S + + S K A+ E +++
Sbjct: 9 DLTVEILSRLPAKSVARFHCVSKQWGSIFGSPYFKELFLTRSSTKPRLLFAMAEKVNE 66
>sp|Q9FIH4|FB280_ARATH Putative F-box protein At5g42430 OS=Arabidopsis thaliana
GN=At5g42430 PE=4 SV=1
Length = 395
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRP 61
D++ ILSRLPAKS CV+K W S+L RP
Sbjct: 13 DLILEILSRLPAKSITRFHCVSKLW----GSMLCRP 44
>sp|Q9FFG9|FB282_ARATH Putative F-box protein At5g44220 OS=Arabidopsis thaliana
GN=At5g44220 PE=4 SV=1
Length = 295
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNS 56
D++ IL RLPAK+ A CV+K W+ + S
Sbjct: 65 DLIKEILKRLPAKTLARFLCVSKLWSSIIRS 95
>sp|Q3E7D1|FB131_ARATH F-box protein At2g40925 OS=Arabidopsis thaliana GN=At2g40925 PE=2
SV=1
Length = 403
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 23 DCE---DVLHNILSRLPAKSFASAACVNKSWN 51
DCE D++ IL RLP KSF CV+K W+
Sbjct: 24 DCEIPPDLMIEILIRLPTKSFMRFKCVSKQWS 55
>sp|Q9FGS3|FB287_ARATH Putative F-box protein At5g50220 OS=Arabidopsis thaliana
GN=At5g50220 PE=4 SV=1
Length = 357
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASAP-----IALQEV 80
D++ IL +LPAKS CV+K W+ + S SR I S + S P I+
Sbjct: 36 DLMVEILKKLPAKSLIKFQCVSKQWSSIIGS--SRDFIDSIVTRSLSQPSRDILISFSTT 93
Query: 81 LDKVLLEPIRPHFAIANVGRGFNMRRTLDFLVKH 114
L ++ + F + RTLD L K+
Sbjct: 94 LTN----------SLKQISSSFPL-RTLDILTKN 116
>sp|Q9SCL2|FB197_ARATH F-box protein At3g49450 OS=Arabidopsis thaliana GN=At3g49450 PE=2
SV=1
Length = 397
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASA 73
D++ ILSR+PAKS A CV+ W NS+L P + + ++SA
Sbjct: 35 DLMVEILSRVPAKSAARFRCVSNDW----NSLLRSPYLTNLFLKRSSA 78
>sp|Q9FIT3|FB297_ARATH Putative F-box protein At5g62060 OS=Arabidopsis thaliana
GN=At5g62060 PE=4 SV=1
Length = 303
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 8 SSKKKKKTIEISSLADCEDVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASAC 67
S+++K + I+I D+ IL +LPAKS CV+K W+ + S R I S
Sbjct: 23 STREKSRYIDIPL-----DITVEILKKLPAKSLVRFQCVSKQWSTIIGS--RRDFIDSIV 75
Query: 68 SFKASAPIALQEVL 81
+ + P +VL
Sbjct: 76 ARSMTHPQQWWDVL 89
>sp|Q9FK54|FB260_ARATH F-box protein At5g18160 OS=Arabidopsis thaliana GN=At5g18160 PE=2
SV=1
Length = 379
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASAPIAL 77
D+ ILSRLPAKS + V+K W +SI + P S K S P L
Sbjct: 37 DITIEILSRLPAKSIVRSRSVSKLW----SSITTTPEFIKHRSKKTSPPCVL 84
>sp|B6YXX2|GLMM_THEON Probable phosphoglucosamine mutase OS=Thermococcus onnurineus
(strain NA1) GN=glmM PE=3 SV=1
Length = 449
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 346 ILDGEQILRHIDQL---ENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQE 402
I G +L ID+L +V YV + + C G +K+R + +A ++ D E
Sbjct: 333 IFAGALVLEMIDRLGPISELAKEVPRYVTLRAKIPCPNG-KKARAMEIIAHEALKSFDYE 391
Query: 403 YLY-VDGVGIKTGDYFQFYQP 422
L +DGV I+ GD++ ++P
Sbjct: 392 RLIDIDGVRIENGDWWILFRP 412
>sp|P0C2G2|FB21_ARATH Putative F-box protein At1g30920 OS=Arabidopsis thaliana
GN=At1g30920 PE=4 SV=1
Length = 400
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSW 50
D++ +ILSRLP+KS A CV+K W
Sbjct: 13 DLILDILSRLPSKSIARCRCVSKLW 37
>sp|P0C2G3|FB308_ARATH Putative F-box protein At1g30925 OS=Arabidopsis thaliana
GN=At1g30925 PE=4 SV=3
Length = 523
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 25 EDVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASA 73
+D+++ IL RLPAKS A +CV+K + SILSR K+SA
Sbjct: 7 DDLVYEILLRLPAKSVARCSCVSK----LRRSILSRQDFTELFLTKSSA 51
>sp|Q9FX02|FB38_ARATH Putative F-box protein At1g47300 OS=Arabidopsis thaliana
GN=At1g47300 PE=4 SV=2
Length = 306
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 25 EDVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRP 61
++++ I+ RLPAKS A CV+K W S+LSRP
Sbjct: 8 KELILEIMLRLPAKSIARFHCVSKQW----ASMLSRP 40
>sp|Q9FT50|FB202_ARATH Putative F-box protein At3g52320 OS=Arabidopsis thaliana
GN=At3g52320 PE=4 SV=1
Length = 390
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 25 EDVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASAPIAL 77
E++L +IL RLPAKS CV+K W + S R + FK S+P L
Sbjct: 29 EEMLIDILIRLPAKSLMRFKCVSKLWLSLITS-----RYFTNRFFKPSSPSCL 76
>sp|Q9SA02|FB26_ARATH F-box protein At1g31080 OS=Arabidopsis thaliana GN=At1g31080 PE=2
SV=1
Length = 355
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 10/48 (20%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSW-NCVCNSILS---------RPRI 63
D++ ILSRLPAKS CV+K W + +C+S + RPR+
Sbjct: 13 DLILEILSRLPAKSTGRFRCVSKLWGSMLCHSYFTELFLTRSSARPRL 60
>sp|O80608|FB96_ARATH Putative F-box protein At2g02890 OS=Arabidopsis thaliana
GN=At2g02890 PE=4 SV=1
Length = 531
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 7 SSSKKKKKTIEISSLADCEDVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASA 66
SS KK+ SSL + D++ ILSRL +KS A CV+K C S+ + P
Sbjct: 132 SSFSSKKRIRHSSSLTN--DLIEEILSRLHSKSVARFRCVSKQ----CASMFASPYFKKL 185
Query: 67 CSFKASAPIAL 77
++SA +L
Sbjct: 186 FQTRSSAKPSL 196
>sp|Q3ECH0|FB75_ARATH F-box protein At1g67130 OS=Arabidopsis thaliana GN=At1g67130 PE=2
SV=3
Length = 454
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNS 56
D++ +ILSRLP KS A CV+K W+ + S
Sbjct: 13 DLILDILSRLPTKSIARFHCVSKLWSSMLAS 43
>sp|P0C2G5|FB45_ARATH Putative F-box protein At1g47800 OS=Arabidopsis thaliana
GN=At1g47800 PE=4 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSW 50
DVL IL +LPAKS A CV+K W
Sbjct: 17 DVLFEILVKLPAKSVARFLCVSKVW 41
>sp|Q9SIV7|FB108_ARATH F-box protein At2g16450 OS=Arabidopsis thaliana GN=At2g16450 PE=2
SV=1
Length = 427
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCVCNSILSRPRIASACSFKASAPIALQE 79
D++ ILSRLPAKS CV+K W + S + + S K A+ E
Sbjct: 9 DLILEILSRLPAKSVRRFHCVSKRWASIFGSPYFKELFLTRSSTKPRLLFAIAE 62
>sp|Q9SXA0|FB42_ARATH Putative F-box protein At1g47730 OS=Arabidopsis thaliana
GN=At1g47730 PE=4 SV=1
Length = 391
Score = 32.7 bits (73), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 26 DVLHNILSRLPAKSFASAACVNKSWNCV------CNSILSRPRI 63
D+ I SRLPAKS CV+K W+ + NS +RP +
Sbjct: 28 DLTSEIFSRLPAKSVVRFRCVSKLWSSITTAPYFTNSFETRPNL 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 209,102,025
Number of Sequences: 539616
Number of extensions: 9250889
Number of successful extensions: 18937
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 18898
Number of HSP's gapped (non-prelim): 47
length of query: 550
length of database: 191,569,459
effective HSP length: 123
effective length of query: 427
effective length of database: 125,196,691
effective search space: 53458987057
effective search space used: 53458987057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)