Your job contains 1 sequence.
>008870
MPASPSFHSDTRKWKRRKREPRKQLNKLDEDDVVEDEDEEQDNNETDNHNNNSNADHRDN
GDDFQHATAPDPASNETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAAYLAGDA
SGRSSAVALENISFGQLQALSVVPADSAALDPERSDTSCVITPPQIMEGKGVVKRFGSRV
HVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIV
SDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA
LKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNYCSQPIPAVYY
QSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGIEM
YNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEVPNTSRTSNSSSRDDRGGLHST
VNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAVGPRVAAACAHASLAALSKQME
GAGHGNRCTT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008870
(550 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036942 - symbol:SWI3C "SWITCH/sucrose nonferm... 1484 4.1e-152 1
POMBASE|SPAC23H3.10 - symbol:ssr2 "SWI/SNF and RSC comple... 356 1.3e-36 2
UNIPROTKB|F1P1A8 - symbol:F1P1A8 "Uncharacterized protein... 198 2.2e-31 3
UNIPROTKB|G3N0H4 - symbol:SMARCC1 "Uncharacterized protei... 198 3.6e-31 3
UNIPROTKB|F1MYU1 - symbol:SMARCC1 "Uncharacterized protei... 198 4.1e-31 3
MGI|MGI:1203524 - symbol:Smarcc1 "SWI/SNF related, matrix... 198 4.6e-31 3
UNIPROTKB|E2REF0 - symbol:SMARCC1 "Uncharacterized protei... 198 5.9e-31 3
UNIPROTKB|F1PVA9 - symbol:SMARCC2 "Uncharacterized protei... 186 1.5e-30 3
UNIPROTKB|F1N4N6 - symbol:SMARCC2 "Uncharacterized protei... 186 1.5e-30 3
ZFIN|ZDB-GENE-060503-273 - symbol:smarcc1b "SWI/SNF relat... 197 1.8e-30 3
UNIPROTKB|F1SM00 - symbol:LOC100621845 "Uncharacterized p... 186 1.9e-30 3
ZFIN|ZDB-GENE-080514-3 - symbol:smarcc1a "SWI/SNF related... 190 2.2e-30 3
RGD|1597704 - symbol:Smarcc2 "SWI/SNF related, matrix ass... 186 2.2e-30 3
UNIPROTKB|I3LRY4 - symbol:I3LRY4 "Uncharacterized protein... 186 2.2e-30 3
MGI|MGI:1915344 - symbol:Smarcc2 "SWI/SNF related, matrix... 186 2.2e-30 3
UNIPROTKB|Q8TAQ2 - symbol:SMARCC2 "SWI/SNF complex subuni... 186 2.2e-30 3
RGD|1304850 - symbol:Smarcc1 "SWI/SNF related, matrix ass... 198 2.3e-30 3
UNIPROTKB|Q92922 - symbol:SMARCC1 "SWI/SNF complex subuni... 198 2.4e-30 3
UNIPROTKB|F8VXC8 - symbol:SMARCC2 "SWI/SNF complex subuni... 186 2.5e-30 3
DICTYBASE|DDB_G0277033 - symbol:swi3 "SWIRM domain-contai... 218 5.7e-29 2
ASPGD|ASPL0000005061 - symbol:AN6705 species:162425 "Emer... 212 9.9e-29 3
UNIPROTKB|G5EF87 - symbol:swsn-1 "SWI3-like protein" spec... 218 1.1e-28 2
WB|WBGene00004203 - symbol:swsn-1 species:6239 "Caenorhab... 218 1.1e-28 2
FB|FBgn0002783 - symbol:mor "moira" species:7227 "Drosoph... 187 2.0e-28 3
SGD|S000001933 - symbol:RSC8 "Component of the RSC chroma... 318 2.4e-26 1
UNIPROTKB|G4MV88 - symbol:MGG_01720 "Transcription regula... 188 3.5e-26 3
SGD|S000003712 - symbol:SWI3 "Subunit of the SWI/SNF chro... 179 2.4e-21 3
TAIR|locus:2043263 - symbol:SWI3A "SWITCH/sucrose nonferm... 269 1.1e-20 1
POMBASE|SPAC17G6.10 - symbol:ssr1 "SWI/SNF and RSC comple... 262 1.6e-20 2
CGD|CAL0002007 - symbol:orf19.4488 species:5476 "Candida ... 253 4.5e-18 2
DICTYBASE|DDB_G0288285 - symbol:mybX "myb domain-containi... 189 5.1e-15 5
CGD|CAL0003837 - symbol:orf19.7234 species:5476 "Candida ... 126 2.9e-12 2
UNIPROTKB|I3LNI6 - symbol:LOC100737447 "Uncharacterized p... 135 7.2e-12 2
UNIPROTKB|F1SLI6 - symbol:LOC100626030 "Uncharacterized p... 172 1.9e-11 2
TAIR|locus:2051028 - symbol:SWI3B "switch subunit 3" spec... 183 4.5e-11 1
UNIPROTKB|I3LJ29 - symbol:SMARCC1 "Uncharacterized protei... 172 4.9e-11 2
DICTYBASE|DDB_G0280079 - symbol:ada2 "transcriptional ada... 163 2.1e-08 1
TAIR|locus:2130609 - symbol:ADA2B "homolog of yeast ADA2 ... 156 4.7e-08 1
POMBASE|SPCC24B10.08c - symbol:ada2 "SAGA complex subunit... 145 6.4e-07 1
UNIPROTKB|I3LTB2 - symbol:TADA2B "Uncharacterized protein... 142 1.3e-06 1
UNIPROTKB|Q86TJ2 - symbol:TADA2B "Transcriptional adapter... 141 1.6e-06 1
RGD|1561605 - symbol:Tada2b "transcriptional adaptor 2B" ... 141 1.6e-06 1
UNIPROTKB|G3MYD1 - symbol:TADA2B "Uncharacterized protein... 137 4.6e-06 1
ZFIN|ZDB-GENE-050522-557 - symbol:tada2b "transcriptional... 125 0.00012 1
CGD|CAL0000716 - symbol:ADA2 species:5476 "Candida albica... 117 0.00080 1
UNIPROTKB|Q59WH0 - symbol:ADA2 "Putative uncharacterized ... 117 0.00080 1
>TAIR|locus:2036942 [details] [associations]
symbol:SWI3C "SWITCH/sucrose nonfermenting 3C"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
HSSP:P32591 eggNOG:COG5259 EMBL:AC007727 KO:K11649 EMBL:AY091026
EMBL:AY117245 IPI:IPI00532467 PIR:D86350 RefSeq:NP_173589.1
UniGene:At.41645 ProteinModelPortal:Q9XI07 SMR:Q9XI07 IntAct:Q9XI07
STRING:Q9XI07 PaxDb:Q9XI07 PRIDE:Q9XI07 EnsemblPlants:AT1G21700.1
GeneID:838774 KEGG:ath:AT1G21700 TAIR:At1g21700
HOGENOM:HOG000243996 InParanoid:Q9XI07 OMA:VAASCAH PhylomeDB:Q9XI07
ProtClustDB:CLSN2679743 Genevestigator:Q9XI07 Uniprot:Q9XI07
Length = 807
Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
Identities = 298/470 (63%), Positives = 348/470 (74%)
Query: 62 DDFQH--ATAPDPASNETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAAYLAGD 119
D+ Q PDP EV+ D G+RI +FP V+RVV RPH SVM +VA E A L G+
Sbjct: 54 DELQQNGGATPDPGLGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGE 113
Query: 120 ASGRSSAVALENISFGQLQALSVVPADSAALDPERSDTSC---VITPPQIMEGKGVVKRF 176
G+ S ALENISFGQLQALS VPADS LD ERSD S VI+PP IM+G+GVVKRF
Sbjct: 114 TRGQGSLPALENISFGQLQALSTVPADS--LDLERSDGSSSAYVISPPPIMDGEGVVKRF 171
Query: 177 GSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEK 236
G VHVLPMHSDWF+P+TV RLERQVVP FFSGKSP+HTPE YME RN IV+KY++NPEK
Sbjct: 172 GDLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEK 231
Query: 237 RLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEPWNRGSYLREDSNGEVS 295
L +SDCQGLVDGV ED R+FRFL+HWGIINYCA QS P P S +RED+NGEV+
Sbjct: 232 TLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVN 291
Query: 296 VPSDALKSIDSLIKFDKPKCSLKVADVYSS--SCGGADFFDLDNTIRERLSENHCNYCSQ 353
VPS AL SIDSLIKFDKP C K +VYSS S G D DLD IRE L ++HCN+CS+
Sbjct: 292 VPSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDG-DSPDLDIRIREHLCDSHCNHCSR 350
Query: 354 PIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFL 413
P+P VY+QSQK+ D+LLC +CFH GRFV GHS LD++RVDP + YGD DG+ W+DQET L
Sbjct: 351 PLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLL 410
Query: 414 LLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEVPXXXXXXXXXXXXX 473
LLE +E+YN+NW +IA+HV +KSKAQCILHF+RLP+EDG+L+NVEV
Sbjct: 411 LLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYD 470
Query: 474 XGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAVGPRV 523
G S NGDLPG Q +D E +LPF S NPVMALVAFLASAVGPRV
Sbjct: 471 HKGTDS--NGDLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRV 518
>POMBASE|SPAC23H3.10 [details] [associations]
symbol:ssr2 "SWI/SNF and RSC complex subunit Ssr2"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IC] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0016586 "RSC complex" evidence=IDA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS01357 PROSITE:PS50135
PROSITE:PS50934 SMART:SM00291 SMART:SM00717 PomBase:SPAC23H3.10
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000790 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016586 eggNOG:COG5259
OrthoDB:EOG4PZNGG KO:K11649 EMBL:D89227 PIR:T38303 PIR:T43061
RefSeq:NP_593800.1 ProteinModelPortal:O14470 SMR:O14470
DIP:DIP-48383N STRING:O14470 EnsemblFungi:SPAC23H3.10.1
GeneID:2541851 KEGG:spo:SPAC23H3.10 OMA:TEYLTIT NextBio:20802939
Uniprot:O14470
Length = 503
Score = 356 (130.4 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 85/285 (29%), Positives = 148/285 (51%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF +H +ER+ P FF+GKSP TP Y + R+ ++ Y P + L V+
Sbjct: 19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVT 78
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA 300
C+ LV V + R+ FL WG+INY +P R ++ +G V S+
Sbjct: 79 ACRRNLVGDVCA--IIRVHAFLEQWGLINY-----QIDPETRPAFRLPPISGHVQAISNT 131
Query: 301 -LKSIDSLIKFDKPKCS--------LKVADV-YSSSCGGADFFDL--DNTIRERLS--EN 346
+ + + L + P +K+ + YS S + ++ +++ +
Sbjct: 132 PIVTQEMLAQHPPPSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDK 191
Query: 347 HCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETW 406
C C +Y + K +CP C+ +GRF + +S D++ +D A ++ + + W
Sbjct: 192 VCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMD-AIDFNHDEEKPW 250
Query: 407 SDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMED 451
S+QET LLLE IE Y D+WN+IA HV +++K QC++HF+++P+ED
Sbjct: 251 SNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIED 295
Score = 54 (24.1 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 499 LPFSNSGNPVMALVAFLASAV 519
LPF + NPV++ + +LAS V
Sbjct: 313 LPFDENENPVLSTLTYLASIV 333
>UNIPROTKB|F1P1A8 [details] [associations]
symbol:F1P1A8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778
"WINAC complex" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 OMA:YKKYVHA GeneTree:ENSGT00390000018166
EMBL:AADN02000062 EMBL:AADN02000057 EMBL:AADN02000058
EMBL:AADN02000059 EMBL:AADN02000060 EMBL:AADN02000061
IPI:IPI00575887 Ensembl:ENSGALT00000008096 Uniprot:F1P1A8
Length = 1035
Score = 198 (74.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 541 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 600
Query: 449 MEDGILEN 456
+ED LEN
Sbjct: 601 IEDPYLEN 608
Score = 181 (68.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S I P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 360 DPNKGDQSRSIDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 413
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG+INY
Sbjct: 414 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLINY 472
Score = 95 (38.5 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 621 VPFSQSGNPVMSTVAFLASVVDPRV 645
>UNIPROTKB|G3N0H4 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:DAAA02054442 Ensembl:ENSBTAT00000065210 Uniprot:G3N0H4
Length = 925
Score = 198 (74.8 bits), Expect = 3.6e-31, Sum P(3) = 3.6e-31
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 543 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 602
Query: 449 MEDGILEN 456
+ED LEN
Sbjct: 603 IEDPYLEN 610
Score = 177 (67.4 bits), Expect = 3.6e-31, Sum P(3) = 3.6e-31
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 361 DPGKGDQSRSVDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 414
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG++NY
Sbjct: 415 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLVNY 473
Score = 95 (38.5 bits), Expect = 3.6e-31, Sum P(3) = 3.6e-31
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 623 VPFSQSGNPVMSTVAFLASVVDPRV 647
>UNIPROTKB|F1MYU1 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006337 "nucleosome
disassembly" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0071564 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:DAAA02054442 IPI:IPI01002084
Ensembl:ENSBTAT00000044741 Uniprot:F1MYU1
Length = 952
Score = 198 (74.8 bits), Expect = 4.1e-31, Sum P(3) = 4.1e-31
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 542 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 601
Query: 449 MEDGILEN 456
+ED LEN
Sbjct: 602 IEDPYLEN 609
Score = 177 (67.4 bits), Expect = 4.1e-31, Sum P(3) = 4.1e-31
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 361 DPGKGDQSRSVDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 414
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG++NY
Sbjct: 415 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLVNY 473
Score = 95 (38.5 bits), Expect = 4.1e-31, Sum P(3) = 4.1e-31
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 622 VPFSQSGNPVMSTVAFLASVVDPRV 646
>MGI|MGI:1203524 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10090 "Mus musculus" [GO:0001741 "XY body" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006323 "DNA packaging" evidence=TAS] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1203524 GO:GO:0008286 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0006323 GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 CTD:6599
HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649 OMA:YKKYVHA
EMBL:U85614 EMBL:BC052423 EMBL:BC053064 IPI:IPI00125662
IPI:IPI00515361 PIR:T30967 RefSeq:NP_033237.2 UniGene:Mm.85410
ProteinModelPortal:P97496 SMR:P97496 DIP:DIP-39986N IntAct:P97496
MINT:MINT-4084777 STRING:P97496 PhosphoSite:P97496 PaxDb:P97496
PRIDE:P97496 Ensembl:ENSMUST00000088716 Ensembl:ENSMUST00000111969
GeneID:20588 KEGG:mmu:20588 UCSC:uc009rto.1 UCSC:uc009rtp.1
GeneTree:ENSGT00390000018166 InParanoid:P97496 OrthoDB:EOG4JHCF5
NextBio:298891 Bgee:P97496 Genevestigator:P97496
GermOnline:ENSMUSG00000032481 Uniprot:P97496
Length = 1104
Score = 198 (74.8 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 605 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 664
Query: 449 MEDGILEN 456
+ED LEN
Sbjct: 665 IEDPYLEN 672
Score = 179 (68.1 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 424 DPSKGDPSRSVDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 477
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG++NY
Sbjct: 478 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLVNY 536
Score = 95 (38.5 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 685 VPFSQSGNPVMSTVAFLASVVDPRV 709
Score = 42 (19.8 bits), Expect = 6.1e-17, Sum P(3) = 6.1e-17
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 184 PMHSDWFSPDTVHRLE 199
P W SPDTV +L+
Sbjct: 37 PASKFWESPDTVSQLD 52
>UNIPROTKB|E2REF0 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0008286
GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 CTD:6599 KO:K11649 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:AAEX03012237 EMBL:AAEX03012238
RefSeq:XP_533845.2 ProteinModelPortal:E2REF0
Ensembl:ENSCAFT00000020868 GeneID:476640 KEGG:cfa:476640
NextBio:20852260 Uniprot:E2REF0
Length = 1107
Score = 198 (74.8 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 606 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 665
Query: 449 MEDGILEN 456
+ED LEN
Sbjct: 666 IEDPYLEN 673
Score = 178 (67.7 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 425 DPSKGDQSRSLDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 478
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG++NY
Sbjct: 479 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLVNY 537
Score = 95 (38.5 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 686 VPFSQSGNPVMSTVAFLASVVDPRV 710
Score = 38 (18.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 184 PMHSDWFSPDTVHRLE 199
P W SP+TV +L+
Sbjct: 38 PASKFWESPETVSQLD 53
>UNIPROTKB|F1PVA9 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:AAEX03006920 Ensembl:ENSCAFT00000000173
Uniprot:F1PVA9
Length = 1092
Score = 186 (70.5 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVE 458
W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E
Sbjct: 594 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE 646
Score = 182 (69.1 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 418 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 477
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 478 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 515
Score = 100 (40.3 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
+PFS SGNPVM+ VAFLAS V PRV K E
Sbjct: 657 IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 698
>UNIPROTKB|F1N4N6 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
SMART:SM00717 InterPro:IPR001357 GO:GO:0017053 GO:GO:0045892
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GeneTree:ENSGT00390000018166 OMA:QYIQAEP EMBL:DAAA02013534
IPI:IPI00712028 Ensembl:ENSBTAT00000019562 Uniprot:F1N4N6
Length = 1094
Score = 186 (70.5 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVE 458
W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E
Sbjct: 596 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE 648
Score = 182 (69.1 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 389 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 448
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 449 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 486
Score = 100 (40.3 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
+PFS SGNPVM+ VAFLAS V PRV K E
Sbjct: 659 IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 700
>ZFIN|ZDB-GENE-060503-273 [details] [associations]
symbol:smarcc1b "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily c,
member 1b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-060503-273 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CR626876 EMBL:CR626877 IPI:IPI00972005
Ensembl:ENSDART00000085619 Bgee:E7FAW0 Uniprot:E7FAW0
Length = 961
Score = 197 (74.4 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
Y + P + G G W++QET LLLE +EMY D+WN+++EHV ++++ CILHF+RLP
Sbjct: 582 YAKKHP-KSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLP 640
Query: 449 MEDGILENVE 458
+ED LEN E
Sbjct: 641 IEDPYLENSE 650
Score = 177 (67.4 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLI-V 240
++P ++ WF + +H++ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L
Sbjct: 426 IVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 485
Query: 241 SDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
S + L V L R+ FL WG+INY +S P P
Sbjct: 486 SSRRNLTGDVCA--LIRVHSFLEQWGLINYQVDAESRPLP 523
Score = 90 (36.7 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 20/44 (45%), Positives = 23/44 (52%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQMEGA 542
+PFS SGNPVM+ VAFLAS V RV + E A
Sbjct: 661 VPFSQSGNPVMSTVAFLASVVDSRVASAAAKAALEEFSRAREDA 704
>UNIPROTKB|F1SM00 [details] [associations]
symbol:LOC100621845 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CU498845 Ensembl:ENSSSCT00000000410 OMA:AWFDYNX Uniprot:F1SM00
Length = 1167
Score = 186 (70.5 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVE 458
W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E
Sbjct: 644 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE 696
Score = 182 (69.1 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 437 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 496
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 497 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 534
Score = 100 (40.3 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
+PFS SGNPVM+ VAFLAS V PRV K E
Sbjct: 707 IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 748
>ZFIN|ZDB-GENE-080514-3 [details] [associations]
symbol:smarcc1a "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily c, member 1a"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-080514-3 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 EMBL:CR391962 IPI:IPI00972152
RefSeq:XP_003200294.1 UniGene:Dr.76866 PRIDE:F1Q9K1
Ensembl:ENSDART00000109259 GeneID:403020 KEGG:dre:403020 CTD:403020
NextBio:20816825 ArrayExpress:F1Q9K1 Bgee:F1Q9K1 Uniprot:F1Q9K1
Length = 1089
Score = 190 (71.9 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 399 GDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILEN 456
G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+
Sbjct: 610 GAAGGRDWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDQYLES 667
Score = 180 (68.4 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 33/99 (33%), Positives = 58/99 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF +++H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 445 IIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 504
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ + G + R+ FL WG++NY +S P P
Sbjct: 505 SCRRNLTG-DVCAVMRVHAFLEQWGLVNYQVDAESRPLP 542
Score = 96 (38.9 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 680 IPFSQSGNPVMSTVAFLASVVDPRV 704
>RGD|1597704 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
RGD:1597704 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 IPI:IPI00393081 RefSeq:XP_001055673.1
ProteinModelPortal:D4A510 PhosphoSite:D4A510
Ensembl:ENSRNOT00000028244 GeneID:685179 KEGG:rno:685179
UCSC:RGD:1597704 NextBio:729140 ArrayExpress:D4A510 Uniprot:D4A510
Length = 1135
Score = 186 (70.5 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVE 458
W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E
Sbjct: 632 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE 684
Score = 181 (68.8 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IVPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 485 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 522
Score = 100 (40.3 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
+PFS SGNPVM+ VAFLAS V PRV K E
Sbjct: 695 IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 736
>UNIPROTKB|I3LRY4 [details] [associations]
symbol:I3LRY4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:CU694915 Ensembl:ENSSSCT00000032096 Uniprot:I3LRY4
Length = 1212
Score = 186 (70.5 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVE 458
W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E
Sbjct: 598 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE 650
Score = 182 (69.1 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 391 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 450
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 451 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 488
Score = 100 (40.3 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
+PFS SGNPVM+ VAFLAS V PRV K E
Sbjct: 661 IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 702
>MGI|MGI:1915344 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1915344 GO:GO:0017053 GO:GO:0045892 GO:GO:0045893
GO:GO:0007399 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649
GeneTree:ENSGT00390000018166 OrthoDB:EOG4JHCF5 CTD:6601
ChiTaRS:SMARCC2 EMBL:BC058720 EMBL:BC062102 IPI:IPI00381019
IPI:IPI00459742 RefSeq:NP_001107568.1 RefSeq:NP_001107569.1
RefSeq:NP_937803.1 UniGene:Mm.417338 ProteinModelPortal:Q6PDG5
SMR:Q6PDG5 DIP:DIP-48884N IntAct:Q6PDG5 STRING:Q6PDG5
PhosphoSite:Q6PDG5 PaxDb:Q6PDG5 PRIDE:Q6PDG5
Ensembl:ENSMUST00000026433 Ensembl:ENSMUST00000105235 GeneID:68094
KEGG:mmu:68094 UCSC:uc007hmw.2 UCSC:uc007hmx.2 InParanoid:Q6PDG5
OMA:QYIQAEP NextBio:326404 Bgee:Q6PDG5 Genevestigator:Q6PDG5
GermOnline:ENSMUSG00000025369 Uniprot:Q6PDG5
Length = 1213
Score = 186 (70.5 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVE 458
W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E
Sbjct: 601 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE 653
Score = 182 (69.1 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 485 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 522
Score = 100 (40.3 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
+PFS SGNPVM+ VAFLAS V PRV K E
Sbjct: 664 IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 705
>UNIPROTKB|Q8TAQ2 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0017053
"transcriptional repressor complex" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0045892 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0003713 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 UniGene:Hs.632717 EMBL:AC073896 HOGENOM:HOG000047736
HOVERGEN:HBG054849 KO:K11649 EMBL:U66616 EMBL:BT009924
EMBL:AB209006 EMBL:BC009067 EMBL:BC013045 EMBL:BC026222
IPI:IPI00150057 IPI:IPI00216047 IPI:IPI00793163
RefSeq:NP_001123892.1 RefSeq:NP_003066.2 RefSeq:NP_620706.1
UniGene:Hs.236030 ProteinModelPortal:Q8TAQ2 SMR:Q8TAQ2
DIP:DIP-27611N IntAct:Q8TAQ2 MINT:MINT-1151033 STRING:Q8TAQ2
PhosphoSite:Q8TAQ2 DMDM:57012959 PaxDb:Q8TAQ2 PeptideAtlas:Q8TAQ2
PRIDE:Q8TAQ2 DNASU:6601 Ensembl:ENST00000267064
Ensembl:ENST00000347471 Ensembl:ENST00000394023 GeneID:6601
KEGG:hsa:6601 UCSC:uc001ska.3 UCSC:uc001skb.3 CTD:6601
GeneCards:GC12M056555 HGNC:HGNC:11105 HPA:CAB004321 HPA:HPA021213
MIM:601734 neXtProt:NX_Q8TAQ2 PharmGKB:PA35955 InParanoid:Q8TAQ2
PhylomeDB:Q8TAQ2 ChiTaRS:SMARCC2 GenomeRNAi:6601 NextBio:25677
ArrayExpress:Q8TAQ2 Bgee:Q8TAQ2 CleanEx:HS_SMARCC2
Genevestigator:Q8TAQ2 GermOnline:ENSG00000139613 Uniprot:Q8TAQ2
Length = 1214
Score = 186 (70.5 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVE 458
W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E
Sbjct: 601 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE 653
Score = 182 (69.1 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 485 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 522
Score = 100 (40.3 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
+PFS SGNPVM+ VAFLAS V PRV K E
Sbjct: 664 IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 705
>RGD|1304850 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10116 "Rattus norvegicus" [GO:0001741 "XY body"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0008286 "insulin receptor signaling
pathway" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0071778
"WINAC complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 RGD:1304850
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 IPI:IPI00764046
Ensembl:ENSRNOT00000028250 ArrayExpress:D4A4J7 Uniprot:D4A4J7
Length = 1086
Score = 198 (74.8 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 605 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 664
Query: 449 MEDGILEN 456
+ED LEN
Sbjct: 665 IEDPYLEN 672
Score = 172 (65.6 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 449 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 508
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ + G + R+ FL WG++NY
Sbjct: 509 ACRRNLTG-DVCAVMRVHAFLEQWGLVNY 536
Score = 95 (38.5 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 685 VPFSQSGNPVMSTVAFLASVVDPRV 709
Score = 42 (19.8 bits), Expect = 5.7e-17, Sum P(3) = 5.7e-17
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 184 PMHSDWFSPDTVHRLE 199
P W SPDTV +L+
Sbjct: 37 PASKFWESPDTVSQLD 52
>UNIPROTKB|Q92922 [details] [associations]
symbol:SMARCC1 "SWI/SNF complex subunit SMARCC1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF
complex" evidence=ISS] [GO:0071778 "WINAC complex" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0006337 "nucleosome disassembly"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0003713 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884 PROSITE:PS51293
Pathway_Interaction_DB:ar_tf_pathway SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 EMBL:U66615
EMBL:BC039843 EMBL:BC065253 EMBL:BC113465 EMBL:BC117213
IPI:IPI00234252 RefSeq:NP_003065.3 UniGene:Hs.476179 PDB:2YUS
PDBsum:2YUS ProteinModelPortal:Q92922 SMR:Q92922 DIP:DIP-27545N
DIP:DIP-33044N IntAct:Q92922 MINT:MINT-1137868 STRING:Q92922
PhosphoSite:Q92922 DMDM:209572723 PaxDb:Q92922 PRIDE:Q92922
DNASU:6599 Ensembl:ENST00000254480 GeneID:6599 KEGG:hsa:6599
UCSC:uc003crq.2 CTD:6599 GeneCards:GC03M047626 H-InvDB:HIX0030795
HGNC:HGNC:11104 HPA:CAB011576 HPA:CAB016336 HPA:HPA024352
HPA:HPA026853 MIM:601732 neXtProt:NX_Q92922 PharmGKB:PA35954
HOGENOM:HOG000047736 HOVERGEN:HBG054849 InParanoid:Q92922 KO:K11649
OMA:YKKYVHA OrthoDB:EOG4V9TSW PhylomeDB:Q92922 ChiTaRS:SMARCC1
EvolutionaryTrace:Q92922 GenomeRNAi:6599 NextBio:25671
ArrayExpress:Q92922 Bgee:Q92922 CleanEx:HS_SMARCC1
Genevestigator:Q92922 GermOnline:ENSG00000173473 Uniprot:Q92922
Length = 1105
Score = 198 (74.8 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 606 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 665
Query: 449 MEDGILEN 456
+ED LEN
Sbjct: 666 IEDPYLEN 673
Score = 172 (65.6 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 450 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 509
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ + G + R+ FL WG++NY
Sbjct: 510 ACRRNLTG-DVCAVMRVHAFLEQWGLVNY 537
Score = 95 (38.5 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 686 VPFSQSGNPVMSTVAFLASVVDPRV 710
Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 184 PMHSDWFSPDTVHRLE 199
P W SP+TV +L+
Sbjct: 38 PATKFWESPETVSQLD 53
>UNIPROTKB|F8VXC8 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 EMBL:AC073896 HGNC:HGNC:11105
ChiTaRS:SMARCC2 OMA:QYIQAEP IPI:IPI01021606
ProteinModelPortal:F8VXC8 SMR:F8VXC8 PRIDE:F8VXC8
Ensembl:ENST00000550164 ArrayExpress:F8VXC8 Bgee:F8VXC8
Uniprot:F8VXC8
Length = 1245
Score = 186 (70.5 bits), Expect = 2.5e-30, Sum P(3) = 2.5e-30
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVE 458
W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E
Sbjct: 632 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE 684
Score = 182 (69.1 bits), Expect = 2.5e-30, Sum P(3) = 2.5e-30
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 485 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 522
Score = 100 (40.3 bits), Expect = 2.5e-30, Sum P(3) = 2.5e-30
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
+PFS SGNPVM+ VAFLAS V PRV K E
Sbjct: 695 IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 736
>DICTYBASE|DDB_G0277033 [details] [associations]
symbol:swi3 "SWIRM domain-containing protein Swi3"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 InterPro:IPR001357 dictyBase:DDB_G0277033
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000019 SUPFAM:SSF52113 eggNOG:COG5259
KO:K11649 RefSeq:XP_642866.1 ProteinModelPortal:Q550R6 SMR:Q550R6
PRIDE:Q550R6 EnsemblProtists:DDB0219999 GeneID:8620732
KEGG:ddi:DDB_G0277033 InParanoid:Q550R6 OMA:QTTIDMP
ProtClustDB:CLSZ2430855 Uniprot:Q550R6
Length = 1223
Score = 218 (81.8 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
Identities = 53/180 (29%), Positives = 86/180 (47%)
Query: 361 QSQKEVDVLLCPECFHEGRFVTGHSSL--DYIRVDPAREYGDIDGETWSDQETFLLLEGI 418
Q Q +LLC CF + HS L D + E ++ + W+DQET LLLE +
Sbjct: 874 QPQPPQTILLCNNCFTNDQTFIDHSHLIKDQFKKIELPEPSPLEDQ-WTDQETLLLLEAL 932
Query: 419 EMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEVPXXXXXXXXXXXXXXGGLH 478
++Y+D+WN++A+HV TKSK QC+L F++LP+E+ LE+ + G
Sbjct: 933 DIYSDSWNDVADHVKTKSKEQCLLQFLKLPIEEPYLED-NITKSISLQPPSSNSILNGSS 991
Query: 479 STVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQ 538
S N + N N NP++++++FL+++V V K+
Sbjct: 992 SNNNNN----------NNNNQQLLN--NPIVSMISFLSTSVSSEVASAAAKAATDVLNKE 1039
Score = 189 (71.6 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 149 ALDPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFS 208
+L + + T+ PQ K V + S + P WF + +H +E+ +P FF+
Sbjct: 611 SLPQQPTTTTTTSVQPQPQPPKNVTLQ--SSFTIPPSQCTWFKMERIHEVEKNQLPEFFT 668
Query: 209 GKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQ-GLVDGVSPEDLTRIFRFLNHWGI 267
GKSP TPE Y E R+ ++ Y+ NP + L ++ + LV V + R+ FL HWG+
Sbjct: 669 GKSPSKTPEVYKEYRDFMINTYLQNPYQYLTLTAIRRNLVGDVC--SILRVHSFLEHWGL 726
Query: 268 INY 270
INY
Sbjct: 727 INY 729
>ASPGD|ASPL0000005061 [details] [associations]
symbol:AN6705 species:162425 "Emericella nidulans"
[GO:0016586 "RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015616 "DNA translocase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:BN001301 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACD01000112 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 RefSeq:XP_664309.1 ProteinModelPortal:Q5AYC5
STRING:Q5AYC5 EnsemblFungi:CADANIAT00007492 GeneID:2870489
KEGG:ani:AN6705.2 HOGENOM:HOG000180903 OMA:SKTPAVY Uniprot:Q5AYC5
Length = 681
Score = 212 (79.7 bits), Expect = 9.9e-29, Sum P(3) = 9.9e-29
Identities = 37/89 (41%), Positives = 62/89 (69%)
Query: 370 LCPECFHEGRFVTGHSSLDYIRVDPAREYGDI-DGET-WSDQETFLLLEGIEMYNDNWNE 427
LCP CF +GR + H++ D+++++ + Y I D E WSD E LLLEG+E +++NW +
Sbjct: 344 LCPNCFLQGRMPSSHNASDFVKLEDS-SYSRIPDREAPWSDSELLLLLEGLENFDENWEQ 402
Query: 428 IAEHVSTKSKAQCILHFVRLPMEDGILEN 456
IA HV T+++ +C++ F++L +ED LE+
Sbjct: 403 IANHVGTRTREECVMKFLQLEIEDQYLED 431
Score = 165 (63.1 bits), Expect = 9.9e-29, Sum P(3) = 9.9e-29
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 178 SRVH--VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPE 235
S+ H +LP +S WF T+H +E++ + FF+G++ TP Y + R+ ++ Y NP
Sbjct: 100 SQTHAIILPSYSTWFDMHTIHPIEKKALAEFFNGRNRSKTPAVYKDYRDFMINTYRLNPI 159
Query: 236 KRLIVSDCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRG 283
+ L V+ C+ L V + R+ FL WG+INY Q+ P N G
Sbjct: 160 EYLTVTACRRNLAGDVCA--IMRVHSFLEQWGLINYQVDPQT-RPSNIG 205
Score = 62 (26.9 bits), Expect = 9.9e-29, Sum P(3) = 9.9e-29
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 498 RLPFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
R P S+ NPV+++VAFLA P V K+++
Sbjct: 441 REPVSHIENPVLSVVAFLAQMAEPSVAAAAAGRSVVEIRKELK 483
>UNIPROTKB|G5EF87 [details] [associations]
symbol:swsn-1 "SWI3-like protein" species:6239
"Caenorhabditis elegans" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0040018
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 GeneTree:ENSGT00390000018166 EMBL:AF230279
PIR:T26449 RefSeq:NP_001256906.1 UniGene:Cel.7072 SMR:G5EF87
IntAct:G5EF87 EnsemblMetazoa:Y113G7B.23 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 WormBase:Y113G7B.23a
OMA:HFDELEQ NextBio:908892 Uniprot:G5EF87
Length = 789
Score = 218 (81.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 54/146 (36%), Positives = 75/146 (51%)
Query: 396 REYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGIL- 454
R G G W++QET LLLE +EM+ D+WN++ +HV T+++ +C+L F++LP++D L
Sbjct: 247 RTKGAPPGRDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLT 306
Query: 455 ENVEVPXXXXXXXXXXXXXXGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAF 514
EN+ GG V G L Q +PFS SGNPVM+ VAF
Sbjct: 307 ENLS--------SDKAEAAPGGAAKEVLGPL---AFQP------VPFSQSGNPVMSTVAF 349
Query: 515 LASAVGPRVXXXXXXXXXXXXXKQME 540
LAS V P+V K E
Sbjct: 350 LASVVDPQVAAAATKAAMEEFGKLKE 375
Score = 181 (68.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 119 DASGRSSAVALENISFG-QLQALSVVPADSAALDPERSDTSCVITPPQIMEGKGVVKRFG 177
D RS A + G + A P D + PQ+ EG V+++
Sbjct: 23 DDDSRSGAAVKVEVPKGKEKDAEFSAPKGQKLTDLDEEGVQSTKEAPQLAEGN-VIEQ-- 79
Query: 178 SRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKR 237
+ V+P ++ WF + +H++E++ +P FF+GK+ TP+ Y+ RN +V Y NP +
Sbjct: 80 THYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEY 139
Query: 238 LIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ + C+ + G + R+ FL WG++NY
Sbjct: 140 VSATACRRNLAG-DVCSIVRLHSFLEQWGLLNY 171
Score = 48 (22.0 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 287 REDSNGEVSVPSDALKSID-SLIKFDKPKCSLKVADVYSSSCGGADFFDLD 336
R+D +G+VS+ D S + +K + PK K A+ S+ G DLD
Sbjct: 10 RDDDDGDVSMTGDDDDSRSGAAVKVEVPKGKEKDAEF--SAPKGQKLTDLD 58
>WB|WBGene00004203 [details] [associations]
symbol:swsn-1 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IGI;IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0046662 "regulation of oviposition" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003677
GO:GO:0040018 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 UniGene:Cel.7072 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 RefSeq:NP_001256907.1
ProteinModelPortal:H8ESF3 SMR:H8ESF3 WormBase:Y113G7B.23c
Uniprot:H8ESF3
Length = 792
Score = 218 (81.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 54/146 (36%), Positives = 75/146 (51%)
Query: 396 REYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGIL- 454
R G G W++QET LLLE +EM+ D+WN++ +HV T+++ +C+L F++LP++D L
Sbjct: 247 RTKGAPPGRDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLT 306
Query: 455 ENVEVPXXXXXXXXXXXXXXGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAF 514
EN+ GG V G L Q +PFS SGNPVM+ VAF
Sbjct: 307 ENLS--------SDKAEAAPGGAAKEVLGPL---AFQP------VPFSQSGNPVMSTVAF 349
Query: 515 LASAVGPRVXXXXXXXXXXXXXKQME 540
LAS V P+V K E
Sbjct: 350 LASVVDPQVAAAATKAAMEEFGKLKE 375
Score = 181 (68.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 119 DASGRSSAVALENISFG-QLQALSVVPADSAALDPERSDTSCVITPPQIMEGKGVVKRFG 177
D RS A + G + A P D + PQ+ EG V+++
Sbjct: 23 DDDSRSGAAVKVEVPKGKEKDAEFSAPKGQKLTDLDEEGVQSTKEAPQLAEGN-VIEQ-- 79
Query: 178 SRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKR 237
+ V+P ++ WF + +H++E++ +P FF+GK+ TP+ Y+ RN +V Y NP +
Sbjct: 80 THYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEY 139
Query: 238 LIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ + C+ + G + R+ FL WG++NY
Sbjct: 140 VSATACRRNLAG-DVCSIVRLHSFLEQWGLLNY 171
Score = 48 (22.0 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 287 REDSNGEVSVPSDALKSID-SLIKFDKPKCSLKVADVYSSSCGGADFFDLD 336
R+D +G+VS+ D S + +K + PK K A+ S+ G DLD
Sbjct: 10 RDDDDGDVSMTGDDDDSRSGAAVKVEVPKGKEKDAEF--SAPKGQKLTDLD 58
>FB|FBgn0002783 [details] [associations]
symbol:mor "moira" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=NAS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS;IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0035060
"brahma complex" evidence=IDA;NAS;TAS] [GO:0003713 "transcription
coactivator activity" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0008586 "imaginal
disc-derived wing vein morphogenesis" evidence=IMP] [GO:0007474
"imaginal disc-derived wing vein specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357 EMBL:AE014297
GO:GO:0045893 GO:GO:0022008 GO:GO:0003677 GO:GO:0008586
GO:GO:0007474 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0007480 SUPFAM:SSF52113 GO:GO:0045749
GO:GO:0043044 GO:GO:0008587 GO:GO:0035060 KO:K11649
GeneTree:ENSGT00390000018166 OMA:QYIQAEP FlyBase:FBgn0002783
EMBL:AF071502 EMBL:BT031130 PIR:T13153 RefSeq:NP_524373.1
UniGene:Dm.2417 SMR:Q9VF03 DIP:DIP-38882N IntAct:Q9VF03
MINT:MINT-6541278 STRING:Q9VF03 EnsemblMetazoa:FBtr0083238
GeneID:41942 KEGG:dme:Dmel_CG18740 UCSC:CG18740-RA CTD:41942
InParanoid:Q9VF03 GenomeRNAi:41942 NextBio:826387 Uniprot:Q9VF03
Length = 1209
Score = 187 (70.9 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 30/51 (58%), Positives = 44/51 (86%)
Query: 406 WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILEN 456
W+DQET LLLEG+EM+ D+WN++ EHV ++++ +CILHF+RLP+ED LE+
Sbjct: 655 WTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLED 705
Score = 167 (63.8 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P +S WF +++H +E++ +P FF+ K+ TPE YM RN ++ Y NP + L +
Sbjct: 451 IVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTST 510
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ L V + R+ FL WG+INY
Sbjct: 511 ACRRNLAGDVCA--IMRVHAFLEQWGLINY 538
Score = 95 (38.5 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNP+M+ VAFLAS V PRV
Sbjct: 718 IPFSKSGNPIMSTVAFLASVVDPRV 742
>SGD|S000001933 [details] [associations]
symbol:RSC8 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP;IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 SGD:S000001933 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0000082 GO:GO:0008270 EMBL:D50617 EMBL:BK006940
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 GO:GO:0006303 eggNOG:COG5259 EMBL:AY692841 PIR:S56292
RefSeq:NP_116695.3 RefSeq:NP_116697.3 ProteinModelPortal:P43609
SMR:P43609 DIP:DIP-1478N IntAct:P43609 MINT:MINT-401637
STRING:P43609 PaxDb:P43609 PeptideAtlas:P43609 EnsemblFungi:YFR037C
GeneID:850598 GeneID:850600 KEGG:sce:YFR037C KEGG:sce:YFR039C
CYGD:YFR037c HOGENOM:HOG000246692 KO:K11762 OMA:PYEYLTI
OrthoDB:EOG4PZNGG NextBio:966460 Genevestigator:P43609
GermOnline:YFR037C Uniprot:P43609
Length = 557
Score = 318 (117.0 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 94/315 (29%), Positives = 153/315 (48%)
Query: 165 QIMEGKGVVKRF-GSRVH--VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYME 221
Q +E K + RF + H ++P + WF +H +E++ P FF+ S TP+ Y +
Sbjct: 63 QKLEEKAL--RFLAKQTHPVIIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKD 120
Query: 222 CRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PE-- 278
RN I+ Y +P + L ++ + V + + +I FL WG+INY ++ P
Sbjct: 121 TRNFIINTYRLSPYEYLTITAVRRNV-AMDVASIVKIHAFLEKWGLINYQIDPRTKPSLI 179
Query: 279 -PWNRGSY--LREDSNG-EVSVPSDALKS-------IDSLIKFDKP-KCSLKVADVYSSS 326
P G + + + G + +P + +K + +K + P ++K +VY S+
Sbjct: 180 GPSFTGHFQVVLDTPQGLKPFLPENVIKQEVEGGDGAEPQVKKEFPVNLTIK-KNVYDSA 238
Query: 327 CGGADFFDLDNTIRE--RLSENH-CNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTG 383
DF L + R ++ + + C+ C V Y + + D LC CF EG F
Sbjct: 239 ---QDFNALQDESRNSRQIHKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGAN 295
Query: 384 HSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQ-CIL 442
S D+IR++ G+ + WSDQE LLLEGIEMY D W +IA+HV + + CI
Sbjct: 296 FQSSDFIRLE---NNGNSVKKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIE 352
Query: 443 HFVRLPMEDGILENV 457
F+ LP+ED + V
Sbjct: 353 KFLSLPIEDNYIREV 367
>UNIPROTKB|G4MV88 [details] [associations]
symbol:MGG_01720 "Transcription regulatory protein SWI3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:CM001232 KO:K11649 RefSeq:XP_003714717.1
ProteinModelPortal:G4MV88 EnsemblFungi:MGG_01720T0 GeneID:2679776
KEGG:mgr:MGG_01720 Uniprot:G4MV88
Length = 704
Score = 188 (71.2 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 39/127 (30%), Positives = 69/127 (54%)
Query: 336 DNTIRERLSENHCNYCSQPIPAVYY---QSQKEVDVL---LCPECFHEGRFVTGHSSLDY 389
D + +S+ C C + YY Q++ +V LCP C+ R ++ Y
Sbjct: 333 DGLTKAPISKVTCFTCGKDCTREYYHKVQTEGGANVPKKELCPGCYASSRMDAKEDNMGY 392
Query: 390 IRVDPAREYGDIDGET-WSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 448
+++ + +D E W+D+ET LLE ++ Y+++W EIA HV T+++ +C LHF++L
Sbjct: 393 EKMENPQYPATVDREAPWTDEETVRLLEALQKYDEDWGEIANHVGTRTREECALHFLQLD 452
Query: 449 MEDGILE 455
+ED L+
Sbjct: 453 IEDKYLD 459
Score = 159 (61.0 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 33/100 (33%), Positives = 55/100 (55%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
VLP ++ WF + ++ +E++ +P FF+ ++ TP Y + R+ ++ Y NP + L V+
Sbjct: 138 VLPSYTVWFDMNAINNIEKKALPEFFNSRNRSKTPAVYKDYRDFMINTYRLNPAEYLTVT 197
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCA-AVQSPEP 279
C+ L V + R+ FL WG+INY A Q P P
Sbjct: 198 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAEQRPAP 235
Score = 71 (30.1 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 481 VNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAVGP 521
+ ++P G + LPFS++ NP++++VAFLA+ P
Sbjct: 463 LQANVP-TGFPTIGNDKLLPFSHADNPILSVVAFLATLADP 502
>SGD|S000003712 [details] [associations]
symbol:SWI3 "Subunit of the SWI/SNF chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0003682
"chromatin binding" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IEA;IMP;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000436 "carbon
catabolite activation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0031496
"positive regulation of mating type switching" evidence=IMP]
[GO:0042393 "histone binding" evidence=IPI] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 SGD:S000003712 EMBL:BK006943
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0005987 GO:GO:0043044
GO:GO:0000436 EMBL:X56792 eggNOG:COG5259 OrthoDB:EOG4PZNGG
GeneTree:ENSGT00390000018166 GO:GO:0044109 GO:GO:0031496
EMBL:M84390 EMBL:Z49451 PIR:S26706 RefSeq:NP_012359.1 PDB:2FQ3
PDBsum:2FQ3 ProteinModelPortal:P32591 SMR:P32591 DIP:DIP-2471N
IntAct:P32591 MINT:MINT-563159 STRING:P32591 PaxDb:P32591
PeptideAtlas:P32591 EnsemblFungi:YJL176C GeneID:853264
KEGG:sce:YJL176C CYGD:YJL176c HOGENOM:HOG000142068 KO:K11772
OMA:ERISENC EvolutionaryTrace:P32591 NextBio:973526
Genevestigator:P32591 GermOnline:YJL176C Uniprot:P32591
Length = 825
Score = 179 (68.1 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
V+P +S WF+ + +H +E Q +P FF+ + P TPE YM RN +V Y NP + V+
Sbjct: 306 VIPSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVT 365
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ V G + L R+ +FL WG+INY
Sbjct: 366 TARRNVSGDAAA-LFRLHKFLTKWGLINY 393
Score = 124 (48.7 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 401 IDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGIL 454
ID E WS ++ LL+GI+ + +W ++A++V KS QCIL F++LP+ED L
Sbjct: 523 ID-ENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPEQCILRFLQLPIEDKFL 575
Score = 72 (30.4 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 489 GLQEADMENRLPFSNSGNPVMALVAFLASAVGPR 522
GL LPFS S NPV++ +AFL V P+
Sbjct: 588 GLGPLKYAPHLPFSKSENPVLSTIAFLVGLVNPK 621
>TAIR|locus:2043263 [details] [associations]
symbol:SWI3A "SWITCH/sucrose nonfermenting 3A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0016514 "SWI/SNF complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
EMBL:AC002535 HSSP:P32591 eggNOG:COG5259 KO:K11649 EMBL:AY062794
EMBL:AY081570 IPI:IPI00529579 PIR:T00422 RefSeq:NP_850476.1
UniGene:At.27229 ProteinModelPortal:Q8W475 SMR:Q8W475 IntAct:Q8W475
STRING:Q8W475 PaxDb:Q8W475 PRIDE:Q8W475 EnsemblPlants:AT2G47620.1
GeneID:819375 KEGG:ath:AT2G47620 TAIR:At2g47620
HOGENOM:HOG000083881 InParanoid:Q8W475 OMA:SCPKEIF PhylomeDB:Q8W475
ProtClustDB:CLSN2680302 Genevestigator:Q8W475 Uniprot:Q8W475
Length = 512
Score = 269 (99.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 69/281 (24%), Positives = 142/281 (50%)
Query: 180 VHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLI 239
++ +P S WF D +H +ER+ FF+ S TP+ Y E R+ I+ K+ ++ +RL
Sbjct: 12 LYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLT 71
Query: 240 VSDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNR--GSYLREDSNGEVSVP 297
+ + + G L ++F FL WG+IN+ ++++ + + + + + + V
Sbjct: 72 FTSVRKFLVG-DVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVT 130
Query: 298 S--DALKSIDS--LIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNYCSQ 353
+ ++L+ I + L++ ++ + +KV + S S +D D+ + C +C +
Sbjct: 131 ATPNSLRPITAPPLVE-ERVETGIKVPPLTSYSDVFSDLKKPDHVLV-------CAHCGE 182
Query: 354 PIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFL 413
+ +YQ K + V +C +CF G + +++ D+ + G+ W+++E L
Sbjct: 183 RCDSPFYQHNKGI-VNICEKCFKNGNYGENNTADDFKLI------GNSAAAVWTEEEILL 235
Query: 414 LLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGIL 454
LLE + + D+W I++ VSTKS+ CI + LP + ++
Sbjct: 236 LLESVLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLM 276
>POMBASE|SPAC17G6.10 [details] [associations]
symbol:ssr1 "SWI/SNF and RSC complex subunit Ssr1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0016586 "RSC complex" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=NAS] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 PomBase:SPAC17G6.10 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000122
GO:GO:0000790 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0016586 HSSP:P32591 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 PIR:T37842 RefSeq:NP_594257.1 ProteinModelPortal:O13788
DIP:DIP-48380N STRING:O13788 EnsemblFungi:SPAC17G6.10.1
GeneID:2542400 KEGG:spo:SPAC17G6.10 OMA:LCARCYV NextBio:20803459
Uniprot:O13788
Length = 527
Score = 262 (97.3 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 96/339 (28%), Positives = 151/339 (44%)
Query: 143 VPADSAALDPERSDTSCVI-TPPQIM-EGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLER 200
VP DSA P D S T P++ E K + +V V P + WF VH +E+
Sbjct: 16 VP-DSA--QPMELDVSKKEDTEPEVRDEAKEFLLSQLPQVEV-PEWAQWFDFSKVHEIEK 71
Query: 201 QVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQ-GLVDGVSPEDLTRIF 259
+ P FF GK+ TPE Y E R+ +++ + N + L + C+ L V + R+
Sbjct: 72 KQNPEFFDGKNTSKTPEVYKEYRDFMISTFRLNSKVYLTFTACRRNLAGDVCA--VLRVH 129
Query: 260 RFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDALKSIDSLIKFDKPKCSL-- 317
RFL WG+INY + P R S + S + +D + + L+ P S+
Sbjct: 130 RFLEQWGLINY-----NVNPDTRPSKIGPPSTSHFQILADTPRGLVPLLP--PPSSSIPR 182
Query: 318 -KVADVYSSSCGGADFFD--LDNTIRERLSE-NHCNYCSQPIPAVYYQSQKEVDVLLCPE 373
K + S + +D LD+ ++ + S N S QS C
Sbjct: 183 SKAVTIEDPSIVRTNIYDPSLDDVLKGKGSTPNQKPSLSNLHENNIDQSDSPQHCYCCGN 242
Query: 374 CFHEGRFVTGHSSLDYIRVD-------PA----REYGDI-------DGETWSDQETFLLL 415
F+E + + + + + P+ +Y ++ D +TW+ QE LL
Sbjct: 243 KFNESYYQSQTAQKYNVCISCYQQNRFPSPTTIADYKEVAIQNKIEDDDTWTAQELVLLS 302
Query: 416 EGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGIL 454
EG+EMY+D+W ++A HV+TKS +CIL F+ LP D L
Sbjct: 303 EGVEMYSDDWAKVASHVNTKSVEECILKFLNLPSSDKAL 341
Score = 47 (21.6 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 506 NPVMALVAFLASAVGP 521
NP++++V+FLA V P
Sbjct: 360 NPILSVVSFLAKMVPP 375
>CGD|CAL0002007 [details] [associations]
symbol:orf19.4488 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0044109 "cellular alcohol
catabolic process" evidence=IEA] [GO:0031496 "positive regulation
of mating type switching" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0005987 "sucrose catabolic
process" evidence=IEA] [GO:0000436 "carbon catabolite activation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
CGD:CAL0002007 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AACQ01000141 KO:K11772
RefSeq:XP_712915.1 ProteinModelPortal:Q59TH7 SMR:Q59TH7
STRING:Q59TH7 GeneID:3645438 KEGG:cal:CaO19.4488 Uniprot:Q59TH7
Length = 971
Score = 253 (94.1 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 78/278 (28%), Positives = 132/278 (47%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
V+P ++ WF+ +H++E++ +P FF P +P+ Y+ RN ++ Y NP + L ++
Sbjct: 421 VIPSYASWFNMKKIHKIEKESLPEFFDSIHPSKSPKLYVNYRNFMINSYRLNPNEFLTLT 480
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA 300
C+ LV V L R+ RFLN WG+INY Q +P G L + NG+ S+ D
Sbjct: 481 SCRRNLVGDVGT--LMRVHRFLNKWGLINYQVRPQF-KP---GYALEKMPNGQ-SM--DL 531
Query: 301 LKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSEN--HCNYCSQPIPAV 358
+ D +KFD P+ L D D L + E + N QP P
Sbjct: 532 PYTGDYHVKFDTPR-GLFPFDTSRIPVERVDVKKLQQLMNESSNSNSGEVKQEKQPPPPQ 590
Query: 359 YYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVD----PAREYGDIDGETWSDQETFLL 414
Q++ + ++G+ G + + ++ P ++ DG W+ E L
Sbjct: 591 QPPQQQQ------KQNGNKGK-KHGLEEEEKVEIEGSQPPLKKKHQEDG--WTKTEKDAL 641
Query: 415 LEGIEMYNDNWNEIAEHVS-TKSKAQCILHFVRLPMED 451
+ ++ + ++W +IA V K+ QCIL F++LP+ED
Sbjct: 642 ISAVKTFKNDWYKIAHQVGGNKTPEQCILEFLKLPLED 679
Score = 44 (20.5 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 500 PFSNSGNPVMALVAFLASAVGPRVXXXXXXXXXXXXXKQME 540
P S+ NPV+A + F+ V V + +E
Sbjct: 702 PISSIDNPVLANLTFMTKLVDSNVAKAASEAAKKAMDESIE 742
>DICTYBASE|DDB_G0288285 [details] [associations]
symbol:mybX "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
dictyBase:DDB_G0288285 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GenomeReviews:CM000154_GR SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000109 RefSeq:XP_636792.1 HSSP:P32591
ProteinModelPortal:Q54J55 PRIDE:Q54J55 EnsemblProtists:DDB0220513
GeneID:8626549 KEGG:ddi:DDB_G0288285 eggNOG:COG5259 OMA:WDLINCF
Uniprot:Q54J55
Length = 1620
Score = 189 (71.6 bits), Expect = 5.1e-15, Sum P(5) = 5.1e-15
Identities = 54/185 (29%), Positives = 87/185 (47%)
Query: 281 NRGSYLREDSNGEVSVPSDALKSIDSLIKFDKPKCSLKVAD---VYSSS----CGGADFF 333
+ G + ED + E+ + D D K K + K A+ + C
Sbjct: 810 DEGEVVEEDEDEEMEIEEDEEDEEDEKSKEPKKLTTTKSANDQLIKKKKPLFECKKCKA- 868
Query: 334 DLDNTIRERLSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVD 393
D N +R +L N +P +Y +++C CF G + S + R++
Sbjct: 869 DCSN-VRYQLVNNSTALDGNILPEYFYP------MIICVNCFSSGNYENFIQSSSFQRIE 921
Query: 394 PAR--EYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVS-TKSKAQCILHFVRLPME 450
+ E+G W+D ET LLLEGIE++ DNW EI++++ +K+ QC+ HF+RLP+E
Sbjct: 922 QHQPEEFG------WTDIETLLLLEGIEIFRDNWQEISDYIGGSKTPEQCLTHFIRLPIE 975
Query: 451 DGILE 455
D LE
Sbjct: 976 DEFLE 980
Score = 66 (28.3 bits), Expect = 5.1e-15, Sum P(5) = 5.1e-15
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 217 EKYMECRNHIVAKYMDNPEKRLIVSDCQG-LVDG------VSPEDLTRIFRFLNHWGIIN 269
E Y R++++ Y NP + L V+D + ++ V+ + +IF FL +W +IN
Sbjct: 352 ELYKIYRDYMITSYQKNPYQYLSVTDVKNHFINQNKKTFKVNIRSIIKIFDFLEYWDLIN 411
Score = 59 (25.8 bits), Expect = 5.1e-15, Sum P(5) = 5.1e-15
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 486 PGAGLQEADMENRLPFSNS---GNPVMALVAFLASAVGP 521
P L + ++++ PFS + NP+M+LVAF +S P
Sbjct: 987 PVGSLSKKEIDSNNPFSITYGVNNPIMSLVAFFSSYSQP 1025
Score = 48 (22.0 bits), Expect = 5.1e-15, Sum P(5) = 5.1e-15
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 188 DWF-SPDTVHRLERQVVPHFF 207
+WF S D +H++E +P FF
Sbjct: 275 NWFTSLDNIHQVEINNLPEFF 295
Score = 40 (19.1 bits), Expect = 5.1e-15, Sum P(5) = 5.1e-15
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 133 SFGQLQALSVVPADSAALDPERSDTSCVIT 162
S G L VP++ AA P + T+ T
Sbjct: 10 SIGNTPILGSVPSNIAAAPPTTTTTTTTTT 39
>CGD|CAL0003837 [details] [associations]
symbol:orf19.7234 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0015616 "DNA
translocase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 CGD:CAL0003837 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACQ01000092 eggNOG:COG5259 KO:K11762
RefSeq:XP_715034.1 ProteinModelPortal:Q59ZV7 STRING:Q59ZV7
GeneID:3643306 KEGG:cal:CaO19.7234 Uniprot:Q59ZV7
Length = 561
Score = 126 (49.4 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDH-TPEKYMECRNHIVAKYMDNPEKRLIV 240
++P + WF +H +E++ +P FF + + + Y R+ IV + NP++ L +
Sbjct: 64 IVPSFAKWFDLSKIHDIEKKSLPDFFVEDGSGYKSSQDYKYIRDFIVNTFRLNPKEYLTI 123
Query: 241 SDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA 300
+ + + G ++ RI +FL WG+INY +P + S L G + DA
Sbjct: 124 TAVRRNLSG-DVTNIIRIHQFLEQWGLINY-----QIDPKTKSSVLGPQYTGHFQITLDA 177
Score = 118 (46.6 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 369 LLCPECFHEGRFVTGHSSLDYI---RVDPAREYGD------IDG-ETWSDQETFLLLEGI 418
+LC C+ +G F + S D+I R + ++ + ++G E + E +
Sbjct: 281 VLCEICYDQGLFPSSFHSSDFIQLKRTEEGEKWSEQEILLLLEGIEMFGTYEPPSSTGPV 340
Query: 419 EM---YNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGIL 454
+ N+ W++I+EHV+TK++ QCI+ F++LP+ED L
Sbjct: 341 NVNANLNNQWDKISEHVATKTREQCIIKFIQLPIEDKFL 379
>UNIPROTKB|I3LNI6 [details] [associations]
symbol:LOC100737447 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00390000018166 EMBL:CU929897
Ensembl:ENSSSCT00000023426 Uniprot:I3LNI6
Length = 301
Score = 135 (52.6 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 21/37 (56%), Positives = 32/37 (86%)
Query: 420 MYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILEN 456
MY D+WN+++EHV ++++ +CILHF+RLP+ED LEN
Sbjct: 1 MYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEN 37
Score = 95 (38.5 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 499 LPFSNSGNPVMALVAFLASAVGPRV 523
+PFS SGNPVM+ VAFLAS V PRV
Sbjct: 50 VPFSQSGNPVMSTVAFLASVVDPRV 74
>UNIPROTKB|F1SLI6 [details] [associations]
symbol:LOC100626030 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 EMBL:CU633694 EMBL:CU929897
Ensembl:ENSSSCT00000012417 Uniprot:F1SLI6
Length = 1024
Score = 172 (65.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 452 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 511
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ + G + R+ FL WG++NY
Sbjct: 512 ACRRNLTG-DVCAVMRVHAFLEQWGLVNY 539
Score = 68 (29.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLEGI---EMYNDNWNEIAEHVSTKSKAQCILHFV 445
Y + A+ G G W++QET LLLE I E Y + I + +S+ ILH +
Sbjct: 608 YSKKTLAKSKGASAGREWTEQETLLLLETIKREESYKMEPSSIQSCLWPRSEDTPILHCI 667
Query: 446 R-LP 448
+ LP
Sbjct: 668 QTLP 671
>TAIR|locus:2051028 [details] [associations]
symbol:SWI3B "switch subunit 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0040029 "regulation
of gene expression, epigenetic" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0007275 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 EMBL:AC002332 HSSP:P32591
eggNOG:COG5259 KO:K11649 OMA:LCARCYV EMBL:BT004085 EMBL:BT005094
IPI:IPI00525437 PIR:F84747 RefSeq:NP_180919.2 UniGene:At.43725
ProteinModelPortal:Q84JG2 SMR:Q84JG2 IntAct:Q84JG2 STRING:Q84JG2
PaxDb:Q84JG2 PRIDE:Q84JG2 EnsemblPlants:AT2G33610.1 GeneID:817927
KEGG:ath:AT2G33610 TAIR:At2g33610 HOGENOM:HOG000238867
InParanoid:Q84JG2 PhylomeDB:Q84JG2 ProtClustDB:CLSN2680010
Genevestigator:Q84JG2 Uniprot:Q84JG2
Length = 469
Score = 183 (69.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 47/186 (25%), Positives = 82/186 (44%)
Query: 338 TIRERLSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPARE 397
T++E N CN C + K D+ LC C+ + G +S ++ RV+ + E
Sbjct: 166 TVKETAKRN-CNGCKAICSIACFACDK-YDLTLCARCYVRSNYRVGINSSEFKRVEISEE 223
Query: 398 YGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENV 457
WSD+E LLLE + Y D+W ++A HV +++ C+ FV+LP + ++
Sbjct: 224 ----SKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKES 279
Query: 458 EVPXXXXXXXXXXXXXXGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLAS 517
+ + + D G+ + P +++ NP+MA AFL++
Sbjct: 280 D---SEDGLEMFDQIKDSDIPESEGIDKDGSSPNKRI--KLTPLADASNPIMAQAAFLSA 334
Query: 518 AVGPRV 523
G V
Sbjct: 335 LAGTNV 340
Score = 164 (62.8 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 180 VHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLI 239
+HV P +S WFS ++ E + +P FF +S P+ Y+ RN I+ +Y D+ +++
Sbjct: 48 IHV-PSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKIS 106
Query: 240 VSDCQG-LVDGVSPEDLTRIFRFLNHWGIINY-CAAVQSPEPWNRGSYLREDSNGEVSVP 297
+D + LV V + R+F FL+ WG+INY +A P W + + S P
Sbjct: 107 FTDVRRTLVSDVV--SIRRVFDFLDSWGLINYNSSASAKPLKWEEKE-AGKSAGDAASEP 163
Query: 298 SDALKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENH 347
+ +K K C+ A + S +C D +DL R + N+
Sbjct: 164 ATTVKETA------KRNCNGCKA-ICSIACFACDKYDLTLCARCYVRSNY 206
>UNIPROTKB|I3LJ29 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 Ensembl:ENSSSCT00000029308 OMA:EWNISEN
Uniprot:I3LJ29
Length = 532
Score = 172 (65.6 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 341 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 400
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ + G + R+ FL WG++NY
Sbjct: 401 ACRRNLTG-DVCAVMRVHAFLEQWGLVNY 428
Score = 56 (24.8 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 389 YIRVDPAREYGDIDGETWSDQETFLLLE 416
Y + A+ G G W++QET LLLE
Sbjct: 497 YSKKTLAKSKGASAGREWTEQETLLLLE 524
>DICTYBASE|DDB_G0280079 [details] [associations]
symbol:ada2 "transcriptional adapter 2" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=ISS] [GO:0016568 "chromatin modification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;IC]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291 SMART:SM00717
dictyBase:DDB_G0280079 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0016573 GO:GO:0003682 EMBL:AAFI02000035 Gene3D:1.10.10.60
SUPFAM:SSF46689 eggNOG:COG5114 KO:K11314 InterPro:IPR017884
PROSITE:PS51293 RefSeq:XP_641229.1 ProteinModelPortal:Q54VX6
EnsemblProtists:DDB0216344 GeneID:8622360 KEGG:ddi:DDB_G0280079
InParanoid:Q54VX6 Uniprot:Q54VX6
Length = 914
Score = 163 (62.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 42/116 (36%), Positives = 61/116 (52%)
Query: 336 DNTIRERLSEN--HCNYCSQPIPAVY-YQSQKEVDVLLCPECFHEGRFVTGHSSL-DYIR 391
+N I E+++E HC+YC + I V + D LC ECF G +T H + DY
Sbjct: 372 NNFIEEQVNEGLYHCDYCQKDISGVVRIRCSVCTDFDLCLECFSVGVEITPHRNFHDYHV 431
Query: 392 VDPAREYGDIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKA--QCILHF 444
VD + + + W E LLLE IE+Y NWNE++E+V SK+ +C H+
Sbjct: 432 VD--NMHFPMFTDDWGADEELLLLEAIELYGLGNWNEVSENVGAHSKSPLECKAHY 485
>TAIR|locus:2130609 [details] [associations]
symbol:ADA2B "homolog of yeast ADA2 2B" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009631 "cold
acclimation" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009735 GO:GO:0009733 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0003682
GO:GO:0009631 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0003713 EMBL:Z97341 EMBL:AL161544 eggNOG:COG5114
HOGENOM:HOG000163455 KO:K11314 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 OMA:EECESHY
EMBL:AF338770 EMBL:AY143911 EMBL:AY050348 EMBL:BX827435
EMBL:BX827480 IPI:IPI00517802 IPI:IPI00519999 IPI:IPI00537530
PIR:H71430 RefSeq:NP_567495.1 RefSeq:NP_974560.1 RefSeq:NP_974561.1
UniGene:At.4412 UniGene:At.71096 UniGene:At.72978 HSSP:O75478
ProteinModelPortal:Q9ATB4 SMR:Q9ATB4 IntAct:Q9ATB4 STRING:Q9ATB4
PaxDb:Q9ATB4 PRIDE:Q9ATB4 EnsemblPlants:AT4G16420.1 GeneID:827336
KEGG:ath:AT4G16420 TAIR:At4g16420 InParanoid:Q9ATB4
PhylomeDB:Q9ATB4 ProtClustDB:CLSN2689459 Genevestigator:Q9ATB4
Uniprot:Q9ATB4
Length = 487
Score = 156 (60.0 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/100 (38%), Positives = 52/100 (52%)
Query: 347 HCNYCSQPIPA-VYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGET 405
+C+YC + I + + D LC EC G +T H RV + I +
Sbjct: 46 NCDYCQKDITGKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHPYRVMGNLTFPLICPD- 104
Query: 406 WSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCILHF 444
WS + LLLEG+E+Y NW E+AEHV TKSK QC+ H+
Sbjct: 105 WSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQCLEHY 144
>POMBASE|SPCC24B10.08c [details] [associations]
symbol:ada2 "SAGA complex subunit Ada2" species:4896
"Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=EXP;IMP] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IC] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010520 "regulation of reciprocal meiotic
recombination" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 PomBase:SPCC24B10.08c GO:GO:0007126 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016573 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000790
GO:GO:0003713 GO:GO:0006310 PIR:T50415 RefSeq:NP_588011.1 PDB:2ELK
PDBsum:2ELK ProteinModelPortal:Q9P7J7 SMR:Q9P7J7 STRING:Q9P7J7
EnsemblFungi:SPCC24B10.08c.1 GeneID:2539174 KEGG:spo:SPCC24B10.08c
eggNOG:COG5114 HOGENOM:HOG000163455 KO:K11314 OMA:DRSVGEK
OrthoDB:EOG441TKV EvolutionaryTrace:Q9P7J7 NextBio:20800345
GO:GO:0000124 GO:GO:0071470 GO:GO:0010520 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 Uniprot:Q9P7J7
Length = 437
Score = 145 (56.1 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 347 HCNYCSQPIP-AVYYQSQKEVDVLLCPECFHEGRFV-TGHSSLDYIRVDPAREYGDIDGE 404
HCN C+Q I +++ + + VD LC CF G + T H S Y R+ Y D E
Sbjct: 7 HCNVCAQDITRSIHIRCVECVDFDLCIPCFTSGASLGTHHPSHPY-RIIETNSYPIFD-E 64
Query: 405 TWSDQETFLLLEGIEMYN-DNWNEIAEHV-STKSKAQCILHFVRLPMEDGI--LENVEVP 460
W E LL++ E NW +IA++V + ++K +C H+++ +E L +VE+P
Sbjct: 65 NWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTYIESDCYPLASVELP 124
>UNIPROTKB|I3LTB2 [details] [associations]
symbol:TADA2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030914 "STAGA complex" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357 PROSITE:PS50135
SMART:SM00291 SMART:SM00717 GO:GO:0003677 GO:GO:0008270
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293
GeneTree:ENSGT00530000063657 OMA:GRSPSHI GO:GO:0030914 KO:K15127
EMBL:FP326684 RefSeq:XP_003356894.1 Ensembl:ENSSSCT00000030643
GeneID:100622052 KEGG:ssc:100622052 Uniprot:I3LTB2
Length = 420
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 343 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPARE--YG 399
L + +C YC + + ++ + D+ LCPECF G + H Y VD R +G
Sbjct: 4 LGKKYCVYCLSEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWG 63
Query: 400 -DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCIL-HFVRLPMEDGILEN 456
+ +G W+ +E LLL+ IE + NW ++A HV Q ++ H+V + + G L
Sbjct: 64 PEAEGG-WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIH-GNLGK 121
Query: 457 VEVPXXXXXXXXXXXXXXGG-LHSTVNGDLPGAGLQEADME 496
+P GG L ++ LP + A+ +
Sbjct: 122 ACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQ 162
>UNIPROTKB|Q86TJ2 [details] [associations]
symbol:TADA2B "Transcriptional adapter 2-beta" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030914 "STAGA complex"
evidence=IEA] [GO:0070461 "SAGA-type complex" evidence=IDA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357 PROSITE:PS50135
SMART:SM00291 SMART:SM00717 GO:GO:0006355 EMBL:CH471131
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:COG5114
InterPro:IPR017884 InterPro:IPR016827 PIRSF:PIRSF025024
PROSITE:PS51293 OMA:GRSPSHI GO:GO:0070461 GO:GO:0030914
EMBL:AC097382 HSSP:O75478 CTD:93624 HOGENOM:HOG000007843
HOVERGEN:HBG102016 KO:K15127 OrthoDB:EOG4001JG EMBL:AK093974
EMBL:AK096655 EMBL:BC047794 EMBL:BC101334 EMBL:BC101335
EMBL:BC101336 EMBL:BC101337 EMBL:BX641147 IPI:IPI00761105
IPI:IPI00878171 IPI:IPI00879434 RefSeq:NP_689506.2
UniGene:Hs.518614 ProteinModelPortal:Q86TJ2 SMR:Q86TJ2
IntAct:Q86TJ2 STRING:Q86TJ2 PhosphoSite:Q86TJ2 DMDM:166225686
PaxDb:Q86TJ2 PRIDE:Q86TJ2 Ensembl:ENST00000310074
Ensembl:ENST00000512388 Ensembl:ENST00000515646 GeneID:93624
KEGG:hsa:93624 UCSC:uc003gjw.4 UCSC:uc010idi.3
GeneCards:GC04P007043 HGNC:HGNC:30781 HPA:HPA035770 MIM:608790
neXtProt:NX_Q86TJ2 PharmGKB:PA165664556 InParanoid:Q86TJ2
ChiTaRS:TADA2B GenomeRNAi:93624 NextBio:78164 ArrayExpress:Q86TJ2
Bgee:Q86TJ2 Genevestigator:Q86TJ2 Uniprot:Q86TJ2
Length = 420
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 343 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPARE--YG 399
L + +C YC + + ++ + D+ LCPECF G + H Y VD R +G
Sbjct: 4 LGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWG 63
Query: 400 -DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCIL-HFVRLPMEDGILEN 456
+ +G W+ +E LLL+ IE + NW ++A HV Q ++ H+V + + G L
Sbjct: 64 PEAEGG-WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIH-GNLGK 121
Query: 457 VEVPXXXXXXXXXXXXXXGG-LHSTVNGDLPGAGLQEADME 496
+P GG L ++ LP + A+ +
Sbjct: 122 ACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQ 162
>RGD|1561605 [details] [associations]
symbol:Tada2b "transcriptional adaptor 2B" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=IEA;ISO] [GO:0070461 "SAGA-type complex"
evidence=ISO] InterPro:IPR000433 InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357
PROSITE:PS50135 SMART:SM00291 SMART:SM00717 RGD:1561605
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 eggNOG:COG5114 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293
GeneTree:ENSGT00530000063657 OMA:GRSPSHI GO:GO:0030914
EMBL:CH473963 CTD:93624 HOGENOM:HOG000007843 HOVERGEN:HBG102016
KO:K15127 OrthoDB:EOG4001JG EMBL:BC169109 IPI:IPI00364741
RefSeq:NP_001163926.1 UniGene:Rn.22124 SMR:B5DFL8 STRING:B5DFL8
Ensembl:ENSRNOT00000037061 GeneID:289717 KEGG:rno:289717
NextBio:630206 Genevestigator:B5DFL8 Uniprot:B5DFL8
Length = 420
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 343 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPARE--YG 399
L + +C YC + + ++ + D+ LCPECF G + H Y VD R +G
Sbjct: 4 LGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWG 63
Query: 400 -DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCIL-HFVRLPMEDGILEN 456
+ +G W+ +E LLL+ IE + NW ++A HV Q ++ H+V + + G L
Sbjct: 64 PEAEGG-WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIH-GNLGK 121
Query: 457 VEVPXXXXXXXXXXXXXXGG-LHSTVNGDLPGAGLQEADME 496
+P GG L ++ LP + A+ +
Sbjct: 122 ACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQ 162
>UNIPROTKB|G3MYD1 [details] [associations]
symbol:TADA2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030914 "STAGA complex" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS01357 PROSITE:PS50135 SMART:SM00291
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293
GeneTree:ENSGT00530000063657 EMBL:DAAA02067729
Ensembl:ENSBTAT00000064401 OMA:CEANTEA NextBio:20874457
Uniprot:G3MYD1
Length = 422
Score = 137 (53.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 343 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPARE--YG 399
LS+ C YC + + ++ + D+ LCPECF G + H Y VD +G
Sbjct: 4 LSKKCCVYCLAEVSPLCFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDDGHFTLWG 63
Query: 400 -DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCIL-HFVRLPMEDGILEN 456
+++G W+ +E LLL+ IE + NW ++A HV T Q ++ H++ + + G L
Sbjct: 64 PEVEGG-WTCREEQLLLDAIEQFGFGNWEDMAAHVGTSRTPQEVMEHYIIMYIH-GNLGK 121
Query: 457 VEVPXXXXXXXXXXXXXXGG-LHSTVNGDLPGAGLQEAD 494
+P GG L ++ LP + A+
Sbjct: 122 ACIPDSIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAE 160
>ZFIN|ZDB-GENE-050522-557 [details] [associations]
symbol:tada2b "transcriptional adaptor 2 (ADA2
homolog, yeast)-beta" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000433 InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357
PROSITE:PS50135 SMART:SM00291 SMART:SM00717
ZFIN:ZDB-GENE-050522-557 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:COG5114 InterPro:IPR017884
PROSITE:PS51293 HSSP:O75478 EMBL:BC055562 EMBL:BC095241
EMBL:BC165604 IPI:IPI00510934 RefSeq:NP_001019614.1
UniGene:Dr.76959 ProteinModelPortal:Q503N9 STRING:Q503N9
GeneID:554156 KEGG:dre:554156 CTD:93624 HOGENOM:HOG000007843
HOVERGEN:HBG102016 InParanoid:Q7SXK2 KO:K15127 OrthoDB:EOG4001JG
NextBio:20880714 ArrayExpress:Q503N9 Uniprot:Q503N9
Length = 486
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 41/151 (27%), Positives = 66/151 (43%)
Query: 343 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPARE--YG 399
L + +C C + + + + D+ LCPECF G + H Y +VD R +G
Sbjct: 4 LGKKYCVNCLADVTNLRIRCAECQDIELCPECFSAGAEIGNHRRWHGYQQVDGGRFSLWG 63
Query: 400 -DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCIL-HFVRLPMEDGILEN 456
+ +G W+ +E LL+ IE Y NW ++A HV Q ++ H+V + + G L
Sbjct: 64 PEAEGG-WTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYIH-GNLGK 121
Query: 457 VEVPXXXXXXXXXXXXXXGG-LHSTVNGDLP 486
+P GG L ++ LP
Sbjct: 122 ACIPDSIPNRVTDHTCPSGGPLSPSLTTPLP 152
>CGD|CAL0000716 [details] [associations]
symbol:ADA2 species:5476 "Candida albicans" [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:1900189 "positive regulation of cell adhesion involved in
single-species biofilm formation" evidence=IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA] [GO:0046695 "SLIK
(SAGA-like) complex" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001786 "phosphatidylserine binding"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IMP] [GO:0000988 "protein binding transcription
factor activity" evidence=IGI;IMP] [GO:0043709 "cell adhesion
involved in single-species biofilm formation" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0035066
"positive regulation of histone acetylation" evidence=IEA]
[GO:0010520 "regulation of reciprocal meiotic recombination"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0044114 "development of symbiont in host"
evidence=IMP] InterPro:IPR000433 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569
Pfam:PF04433 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934
SMART:SM00291 SMART:SM00717 CGD:CAL0000716 GO:GO:0005634
GO:GO:0009405 GO:GO:0043565 GO:GO:0008270 GO:GO:0016573
GO:GO:0003700 GO:GO:0006357 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0035690 GO:GO:0031505 eggNOG:COG5114
KO:K11314 InterPro:IPR017884 InterPro:IPR016827 PIRSF:PIRSF025024
PROSITE:PS51293 GO:GO:0010811 GO:GO:0043709 GO:GO:1900189
EMBL:AACQ01000114 EMBL:AACQ01000113 GO:GO:0044182 GO:GO:0044114
GO:GO:0000988 RefSeq:XP_713936.1 RefSeq:XP_713994.1
ProteinModelPortal:Q59WH0 SMR:Q59WH0 STRING:Q59WH0 GeneID:3644385
GeneID:3644450 KEGG:cal:CaO19.2331 KEGG:cal:CaO19.9867
Uniprot:Q59WH0
Length = 445
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 29/106 (27%), Positives = 45/106 (42%)
Query: 347 HCNYCSQPIP-AVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGET 405
HC+ CS + Q D LC CF G H ++ Y D +
Sbjct: 9 HCDVCSSDCTNRIRIQCAICTDYDLCVPCFAAGLTTGDHKPWHDYQIIEQNTYPIFDRD- 67
Query: 406 WSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCILHFVRLPME 450
W E LL++G E NW +IA+H+ +SK + H+ ++ +E
Sbjct: 68 WGADEELLLIQGCETSGLGNWADIADHIGNRSKEEVAEHYFKIYLE 113
>UNIPROTKB|Q59WH0 [details] [associations]
symbol:ADA2 "Putative uncharacterized protein ADA2"
species:237561 "Candida albicans SC5314" [GO:0000988 "protein
binding transcription factor activity" evidence=IGI;IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IMP] [GO:0016573
"histone acetylation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031505 "fungal-type cell wall
organization" evidence=IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0043709 "cell adhesion involved in single-species
biofilm formation" evidence=IMP] [GO:0044114 "development of
symbiont in host" evidence=IMP] [GO:0044182 "filamentous growth of
a population of unicellular organisms" evidence=IMP] [GO:1900189
"positive regulation of cell adhesion involved in single-species
biofilm formation" evidence=IMP] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00569 Pfam:PF04433 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291 SMART:SM00717
CGD:CAL0000716 GO:GO:0005634 GO:GO:0009405 GO:GO:0043565
GO:GO:0008270 GO:GO:0016573 GO:GO:0003700 GO:GO:0006357
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035690
GO:GO:0031505 eggNOG:COG5114 KO:K11314 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 GO:GO:0010811
GO:GO:0043709 GO:GO:1900189 EMBL:AACQ01000114 EMBL:AACQ01000113
GO:GO:0044182 GO:GO:0044114 GO:GO:0000988 RefSeq:XP_713936.1
RefSeq:XP_713994.1 ProteinModelPortal:Q59WH0 SMR:Q59WH0
STRING:Q59WH0 GeneID:3644385 GeneID:3644450 KEGG:cal:CaO19.2331
KEGG:cal:CaO19.9867 Uniprot:Q59WH0
Length = 445
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 29/106 (27%), Positives = 45/106 (42%)
Query: 347 HCNYCSQPIP-AVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGET 405
HC+ CS + Q D LC CF G H ++ Y D +
Sbjct: 9 HCDVCSSDCTNRIRIQCAICTDYDLCVPCFAAGLTTGDHKPWHDYQIIEQNTYPIFDRD- 67
Query: 406 WSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCILHFVRLPME 450
W E LL++G E NW +IA+H+ +SK + H+ ++ +E
Sbjct: 68 WGADEELLLIQGCETSGLGNWADIADHIGNRSKEEVAEHYFKIYLE 113
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 550 476 0.00078 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 618 (66 KB)
Total size of DFA: 315 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.15u 0.18s 40.33t Elapsed: 00:00:01
Total cpu time: 40.16u 0.18s 40.34t Elapsed: 00:00:01
Start: Sat May 11 06:28:39 2013 End: Sat May 11 06:28:40 2013