Query 008888
Match_columns 550
No_of_seqs 152 out of 798
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 17:50:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008888.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008888hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00794 kup potassium uptake 100.0 4E-170 9E-175 1397.9 47.0 514 34-550 161-688 (688)
2 PLN00150 potassium ion transpo 100.0 2E-169 5E-174 1398.6 47.6 515 34-550 207-779 (779)
3 PLN00148 potassium transporter 100.0 3E-169 6E-174 1398.8 45.6 515 34-550 190-785 (785)
4 PRK10745 trkD potassium transp 100.0 3E-169 7E-174 1373.6 43.8 486 34-550 137-622 (622)
5 PLN00151 potassium transporter 100.0 8E-169 2E-173 1394.1 47.0 516 34-550 267-852 (852)
6 PLN00149 potassium transporter 100.0 9E-168 2E-172 1387.7 46.9 513 36-550 193-779 (779)
7 COG3158 Kup K+ transporter [In 100.0 4E-165 1E-169 1313.4 41.4 486 34-550 142-627 (627)
8 PF02705 K_trans: K+ potassium 100.0 2E-151 5E-156 1223.7 32.4 410 33-444 125-534 (534)
9 TIGR00911 2A0308 L-type amino 93.8 0.16 3.4E-06 55.9 7.4 102 41-146 166-273 (501)
10 COG0531 PotE Amino acid transp 82.7 11 0.00023 40.3 10.9 180 38-221 132-324 (466)
11 TIGR00909 2A0306 amino acid tr 81.6 8 0.00017 41.3 9.4 209 43-269 136-359 (429)
12 PF13520 AA_permease_2: Amino 80.9 5.9 0.00013 42.1 8.1 224 41-280 119-369 (426)
13 TIGR00907 2A0304 amino acid pe 79.5 9.2 0.0002 41.8 9.2 34 187-220 308-341 (482)
14 TIGR03813 put_Glu_GABA_T putat 77.9 23 0.00051 38.7 11.7 19 321-339 434-452 (474)
15 PRK10435 cadB lysine/cadaverin 76.1 24 0.00052 38.3 11.1 22 44-65 125-146 (435)
16 PRK15049 L-asparagine permease 75.5 15 0.00032 40.9 9.5 175 43-222 147-342 (499)
17 PRK10655 potE putrescine trans 69.0 44 0.00096 36.0 11.1 42 43-84 126-170 (438)
18 PF14362 DUF4407: Domain of un 67.1 41 0.00089 34.9 10.0 89 259-347 12-113 (301)
19 PRK10746 putative transport pr 63.8 73 0.0016 35.0 11.6 25 321-345 427-451 (461)
20 PRK11357 frlA putative fructos 58.6 32 0.00069 37.2 7.6 44 42-85 129-175 (445)
21 PRK10249 phenylalanine transpo 58.0 62 0.0013 35.4 9.8 114 43-159 138-259 (458)
22 TIGR00906 2A0303 cationic amin 53.0 1.5E+02 0.0033 33.6 12.1 45 40-84 161-208 (557)
23 COG4059 MtrE Tetrahydromethano 47.5 16 0.00034 37.4 2.8 40 308-347 243-288 (304)
24 PRK11021 putative transporter; 47.4 2.2E+02 0.0049 30.4 11.8 172 40-222 115-299 (410)
25 TIGR00908 2A0305 ethanolamine 46.3 74 0.0016 34.3 8.0 23 43-65 124-146 (442)
26 TIGR00905 2A0302 transporter, 45.2 1.2E+02 0.0025 33.4 9.4 42 180-221 279-320 (473)
27 PRK10238 aromatic amino acid t 43.7 1.6E+02 0.0036 32.1 10.3 173 43-222 129-322 (456)
28 TIGR00930 2a30 K-Cl cotranspor 40.9 2E+02 0.0044 35.2 11.2 25 41-65 204-228 (953)
29 PRK10580 proY putative proline 39.5 1.4E+02 0.0031 32.5 8.9 24 319-342 423-446 (457)
30 TIGR03810 arg_ornith_anti argi 37.8 3E+02 0.0066 30.1 11.2 44 179-222 274-317 (468)
31 TIGR00910 2A0307_GadC glutamat 36.5 3E+02 0.0064 30.8 11.0 42 118-159 202-245 (507)
32 TIGR01773 GABAperm gamma-amino 35.4 4.4E+02 0.0096 28.6 11.9 176 42-221 128-323 (452)
33 PRK11387 S-methylmethionine tr 34.8 2.6E+02 0.0057 30.6 10.1 21 44-64 133-153 (471)
34 KOG3788 Predicted divalent cat 32.8 4.3E+02 0.0093 29.6 10.9 126 195-333 112-262 (441)
35 KOG3643 GABA receptor [Signal 32.3 38 0.00083 37.7 3.1 64 215-282 225-292 (459)
36 PF06570 DUF1129: Protein of u 32.0 1.4E+02 0.0031 29.4 6.8 21 320-340 179-199 (206)
37 PRK11049 D-alanine/D-serine/gl 29.0 2.9E+02 0.0063 30.3 9.3 106 115-221 216-332 (469)
38 PRK10644 arginine:agmatin anti 27.4 7E+02 0.015 27.0 11.8 23 43-65 128-150 (445)
39 PF05545 FixQ: Cbb3-type cytoc 25.6 59 0.0013 25.0 2.3 28 329-358 21-48 (49)
40 TIGR03428 ureacarb_perm permea 24.7 9.5E+02 0.021 26.3 16.2 25 41-65 145-169 (475)
41 TIGR01940 nqrE NADH:ubiquinone 24.2 2.2E+02 0.0047 28.7 6.5 48 240-287 13-62 (200)
42 PRK05151 electron transport co 23.6 2.2E+02 0.0048 28.5 6.4 48 240-287 14-63 (193)
43 PF11827 DUF3347: Protein of u 22.6 35 0.00077 33.1 0.6 20 158-177 144-163 (174)
44 TIGR00913 2A0310 amino acid pe 22.3 4.5E+02 0.0097 28.7 9.1 103 118-221 205-327 (478)
No 1
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=4.1e-170 Score=1397.91 Aligned_cols=514 Identities=38% Similarity=0.707 Sum_probs=488.8
Q ss_pred ccc-CceeehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcce
Q 008888 34 YDI-SALVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEG 112 (550)
Q Consensus 34 ~~~-~~~Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g 112 (550)
|++ +++|+||||+||++||++||+||+|||++|||||++||++||++|+|||.+|||+||+|+||+||++|+.+||..|
T Consensus 161 p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~ 240 (688)
T TIGR00794 161 PSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVG 240 (688)
T ss_pred CCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCce
Confidence 456 8999999999999999999999999999999999999999999999999997899999999999999999999999
Q ss_pred eeeecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCCcccccccccccccchHHHHHHHH
Q 008888 113 WLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIAT 192 (550)
Q Consensus 113 ~~~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~vilAt 192 (550)
|.+||+|+||+|||||||||||||||+|||+||+++|||||+|||+||||++++||++.+||||.++|+|++||+++|||
T Consensus 241 ~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAt 320 (688)
T TIGR00794 241 WVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIAT 320 (688)
T ss_pred eeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHHH
Q 008888 193 LAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLV 272 (550)
Q Consensus 193 lAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~t 272 (550)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||+|||+|||+|||+|
T Consensus 321 lAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~t 400 (688)
T TIGR00794 321 LAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGT 400 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHhhhhhhhhhhhHHHHHHHHHhC
Q 008888 273 MLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTH 352 (550)
Q Consensus 273 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~ 352 (550)
|+|||+|++++++.+||||++.+++++++|+.+|+.||+||+.|++||||+||++|++++++|+||++||++++++++++
T Consensus 401 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~ 480 (688)
T TIGR00794 401 FLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEH 480 (688)
T ss_pred hHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHhhhCCCCC-cccCCeEEEEeCcCCCCcccchhhccccCcccceEEEEEEEeeeecccCCCCceEEEEEecC-
Q 008888 353 KIDLERLGTLLSDPGV-QRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGL- 430 (550)
Q Consensus 353 ~~~l~~~~~~~~~~~~-~rvpG~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfl~v~~~~vP~V~~~eR~~v~~~~~- 430 (550)
++|+++|++++.+..+ .|+||+|+|+|++ ++++|+++.||++|||++||++||+||+++|+|+||++||++++++++
T Consensus 481 ~~~~~~~~~~l~~~~~l~rvpG~avf~t~~-~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~ 559 (688)
T TIGR00794 481 RVSISALIASLQPKPGLVRVPGIGIYYSNL-VNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPT 559 (688)
T ss_pred CCCHHHHHHHHhhcCCCcccCCeEEEeeCC-ccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCC
Confidence 9999999998765554 7999999999999 999999999999999999999999999999999999999999999985
Q ss_pred CCEEEEEEEEeeeccccCCccchHHHHHHHHHHHHHhhcc-------CCCCCCcch---HHHHHHHHHhccCceEEEEEe
Q 008888 431 KGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLD-------CLPSNPVDI---QEEISALEEAKLSDVIHVRGK 500 (550)
Q Consensus 431 ~g~~rv~~ryGf~e~~~v~~~~f~~~il~~l~~~i~~~~~-------~~~s~~~~~---~~e~~~L~~a~~~~~~y~lg~ 500 (550)
+|+|||++||||||+||+|+ +++++++++++++++++.. .+++ ...+ ++|.++++++.++|++||+||
T Consensus 560 ~g~~rv~~~yGf~e~~~~~~-~l~~~ii~~L~~fi~~~~~~~~~~~~~~~~-~~~~~~~eee~~~~~~~~~~gv~yflg~ 637 (688)
T TIGR00794 560 EGMYRCVIRYGFMDTPNEPK-ELAAHIVNSIVEFVEHECGFNLNNLEELSD-KRCRMPIEEIFENAMETKEHGYSYFMGE 637 (688)
T ss_pred CCEEEEEEEecCCcCCCcHH-HHHHHHHHHHHHHHHHHhhhcccccccccc-cccccchHHHHHHHHHHhhcCCEEEeec
Confidence 48999999999999999764 8999999999998764220 0100 0022 456667888899999999999
Q ss_pred eEEEecCCCchHHHHHHH-HHHHHHHhccCCCCcccCCCCCeEEEEEEEEC
Q 008888 501 TRFYIGKNCKRFDRIMLA-FYEVLHSNCRSALPALSVPLSQRIEVGMLYEA 550 (550)
Q Consensus 501 ~~l~~~~~~~~~~~~~~~-lf~~L~rn~~~~~~~f~lP~~rvvevG~~~~i 550 (550)
+++++++++++++||+++ +|.||+|||++++++|++|+||++|+|+++||
T Consensus 638 ~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 638 ESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred eEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 999999999999999955 99999999999999999999999999999996
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=2.1e-169 Score=1398.57 Aligned_cols=515 Identities=42% Similarity=0.813 Sum_probs=491.4
Q ss_pred ccc-CceeehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcce
Q 008888 34 YDI-SALVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEG 112 (550)
Q Consensus 34 ~~~-~~~Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g 112 (550)
+.+ +++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||..|
T Consensus 207 p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g 286 (779)
T PLN00150 207 SGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQG 286 (779)
T ss_pred CCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCce
Confidence 455 7899999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred eeeecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCCcccccccccccccchHHHHHHHH
Q 008888 113 WLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIAT 192 (550)
Q Consensus 113 ~~~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~vilAt 192 (550)
|.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||+|++||++.+||||+++|+|++||++++||
T Consensus 287 ~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAt 366 (779)
T PLN00150 287 WESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLAT 366 (779)
T ss_pred EEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHHH
Q 008888 193 LAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLV 272 (550)
Q Consensus 193 lAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~t 272 (550)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||++|
T Consensus 367 lAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~v 446 (779)
T PLN00150 367 CSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGV 446 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHhhhhhhhhhhhHHHHHHHHHhC
Q 008888 273 MLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTH 352 (550)
Q Consensus 273 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~ 352 (550)
|++||+|++++++.+||||++++++++++|+++|++|||||+.||+||||+||++|++++++|++|++|++++++++.++
T Consensus 447 M~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~ 526 (779)
T PLN00150 447 MIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQH 526 (779)
T ss_pred hHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHhhhCCCCCcccCCeEEEEeCcCCCCcccchhhccccCcccceEEEEEEEeeeecccCCCCceEEEEEecCCC
Q 008888 353 KIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKG 432 (550)
Q Consensus 353 ~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfl~v~~~~vP~V~~~eR~~v~~~~~~g 432 (550)
++|+++|.+..++.++.||||+|+|+|++ .+++|++|.||++|||++||++||+|++++|+|+||++||++++++++++
T Consensus 527 ~v~~~~~~~l~~~~~~~RvpG~~vf~t~~-~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~ 605 (779)
T PLN00150 527 KVSVGWLLGLGPSLGLVRVPGIGLMYTDL-AHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRA 605 (779)
T ss_pred CCCHHHHHhhcccCCCcccCcEEEEEeCC-CCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCC
Confidence 99999996655555578999999999999 99999999999999999999999999999999999999999999999554
Q ss_pred --EEEEEEEEeeeccccCCccchHHHHHHHHHHHHHhhccC-------------CCC-----C-----------------
Q 008888 433 --VYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDC-------------LPS-----N----------------- 475 (550)
Q Consensus 433 --~~rv~~ryGf~e~~~v~~~~f~~~il~~l~~~i~~~~~~-------------~~s-----~----------------- 475 (550)
+|||++||||||+.. +.+|||+++++++++++++|..+ ..+ +
T Consensus 606 ~r~~r~vvryGy~d~~~-d~~dFE~~LvesL~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (779)
T PLN00150 606 YSMYRCAARYGYTDLEK-KDDNFEQLLIASLERFIEIESFREQSDLESMAASWTPEELMGEGNSVGSGLFTQYDQSDINF 684 (779)
T ss_pred ceEEEEEEEEccCcCcc-cchHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccCCccccccccccccccccc
Confidence 999999999999964 67899999999999998755310 000 0
Q ss_pred -------------------CcchHHHHHHHHHhccCceEEEEEeeEEEecCCCchHHHHHHH-HHHHHHHhccCCCCccc
Q 008888 476 -------------------PVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYEVLHSNCRSALPALS 535 (550)
Q Consensus 476 -------------------~~~~~~e~~~L~~a~~~~~~y~lg~~~l~~~~~~~~~~~~~~~-lf~~L~rn~~~~~~~f~ 535 (550)
.+..++|+++|++|+|+|+.|++||+.++++++++|.||+.+| .|.|||||||++...++
T Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~ 764 (779)
T PLN00150 685 ATSQEWKRPSSQEDSVSGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLN 764 (779)
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccC
Confidence 0011478899999999999999999999999999999999998 99999999999999999
Q ss_pred CCCCCeEEEEEEEEC
Q 008888 536 VPLSQRIEVGMLYEA 550 (550)
Q Consensus 536 lP~~rvvevG~~~~i 550 (550)
+||+|++||||.|++
T Consensus 765 IPh~~LleVGmvY~V 779 (779)
T PLN00150 765 IPHECLLKVGMVYYV 779 (779)
T ss_pred CChHHeEEeceEEEC
Confidence 999999999999986
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=2.5e-169 Score=1398.76 Aligned_cols=515 Identities=41% Similarity=0.765 Sum_probs=490.3
Q ss_pred ccc-CceeehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcce
Q 008888 34 YDI-SALVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEG 112 (550)
Q Consensus 34 ~~~-~~~Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g 112 (550)
+++ +++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||..|
T Consensus 190 p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g 269 (785)
T PLN00148 190 TKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDG 269 (785)
T ss_pred CCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCce
Confidence 455 7899999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred eeeecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCCcccccccccccccchHHHHHHHH
Q 008888 113 WLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIAT 192 (550)
Q Consensus 113 ~~~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~vilAt 192 (550)
|.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||+|++||++.+||||+++|+|++||++++||
T Consensus 270 ~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAt 349 (785)
T PLN00148 270 WISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIAT 349 (785)
T ss_pred EEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHHH
Q 008888 193 LAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLV 272 (550)
Q Consensus 193 lAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~t 272 (550)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++|
T Consensus 350 lAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~v 429 (785)
T PLN00148 350 LAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTV 429 (785)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHhhhhhhhhhhhHHHHHHHHHhC
Q 008888 273 MLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTH 352 (550)
Q Consensus 273 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~ 352 (550)
|++||+|+++|++.+||||++.+++++++|+++|++|||||+.||+||||+||++|++++++|++||+|++++++++.++
T Consensus 430 M~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~ 509 (785)
T PLN00148 430 MFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHN 509 (785)
T ss_pred HHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHhhhCCCCCcccCCeEEEEeCcCCCCcccchhhccccCcccceEEEEEEEeeeecccCCCCceEEEEEecCC-
Q 008888 353 KIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLK- 431 (550)
Q Consensus 353 ~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfl~v~~~~vP~V~~~eR~~v~~~~~~- 431 (550)
++|++++.+..++.++.||||+|+|+|++ .+++|++|.||++|||++||++||+|++++|+|+||++||+.+++++++
T Consensus 510 ~~~~~~~~~l~~~~~~~RVpG~~vf~t~~-~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~ 588 (785)
T PLN00148 510 KVSLKWLLGLGPSLGIVRVPGIGLIYSEL-ATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRP 588 (785)
T ss_pred CCCHHHHHHhcccCCCcccCcEEEEecCC-CCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCC
Confidence 99999996655555578999999999999 9999999999999999999999999999999999999999999999944
Q ss_pred -CEEEEEEEEeeeccccCCccchHHHHHHHHHHHHHhhccCC-------C------------------------C-----
Q 008888 432 -GVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCL-------P------------------------S----- 474 (550)
Q Consensus 432 -g~~rv~~ryGf~e~~~v~~~~f~~~il~~l~~~i~~~~~~~-------~------------------------s----- 474 (550)
++|||++||||||..+ +.+|||++++++++++++.|..+. + +
T Consensus 589 yr~~r~vvryGy~d~~~-~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (785)
T PLN00148 589 YRMYRCIVRYGYKDIQR-DDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQELADI 667 (785)
T ss_pred ceEEEEEEEEccCcccc-cchHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccccccccccccccccc
Confidence 3999999999999975 578999999999999986433100 0 0
Q ss_pred -----------------------C------------------CcchHHHHHHHHHhccCceEEEEEeeEEEecCCCchHH
Q 008888 475 -----------------------N------------------PVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFD 513 (550)
Q Consensus 475 -----------------------~------------------~~~~~~e~~~L~~a~~~~~~y~lg~~~l~~~~~~~~~~ 513 (550)
+ .+..++|+++|++|+|+|+.|++||+.++++++++|.|
T Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~K 747 (785)
T PLN00148 668 DDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLK 747 (785)
T ss_pred ccccccccccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHH
Confidence 0 00014688899999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHhccCCCCcccCCCCCeEEEEEEEEC
Q 008888 514 RIMLA-FYEVLHSNCRSALPALSVPLSQRIEVGMLYEA 550 (550)
Q Consensus 514 ~~~~~-lf~~L~rn~~~~~~~f~lP~~rvvevG~~~~i 550 (550)
|+.++ .|.|||||||++...+++||+|++||||.|++
T Consensus 748 KivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 748 KLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 99999 69999999999999999999999999999986
No 4
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=3.3e-169 Score=1373.56 Aligned_cols=486 Identities=31% Similarity=0.531 Sum_probs=470.8
Q ss_pred cccCceeehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCccee
Q 008888 34 YDISALVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGW 113 (550)
Q Consensus 34 ~~~~~~Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~ 113 (550)
|.++++|+||||+||++||++||+||+|||++|||||++||++||++|++||.+ ||+||+|+||+||++|+.+||..||
T Consensus 137 p~l~~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~~~~gf 215 (622)
T PRK10745 137 PQLDTYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEYKTVSF 215 (622)
T ss_pred CCCCCccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhCCCceE
Confidence 467889999999999999999999999999999999999999999999999997 7999999999999999999999999
Q ss_pred eeecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCCcccccccccccccchHHHHHHHHH
Q 008888 114 LLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATL 193 (550)
Q Consensus 114 ~~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~vilAtl 193 (550)
.+||+|+||+|||||||||||||||+|||+||+++|+|||+|||+||||++++||++.+||||+++|+|++||++++||+
T Consensus 216 ~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~viLATl 295 (622)
T PRK10745 216 FALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATL 295 (622)
T ss_pred EEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHHHH
Q 008888 194 AAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVM 273 (550)
Q Consensus 194 AtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~tM 273 (550)
||||||||+|||+||+++||+||||+||+||+|||++++||||||.|||+||++|+++|++||||+|||+|||+|||+||
T Consensus 296 AtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiAVt~tM 375 (622)
T PRK10745 296 ATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTM 375 (622)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhhheeHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHhhhhhhhhhhhHHHHHHHHHhCC
Q 008888 274 LITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHK 353 (550)
Q Consensus 274 ~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~ 353 (550)
++||+|++++++.+|||+++.++++.++|+.+|+.||+||+.|++||||+|+++|++++++|+||++||+++.+++++++
T Consensus 376 ~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~~~~~~ 455 (622)
T PRK10745 376 VLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRRMHEHG 455 (622)
T ss_pred HHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHhhhCCCCCcccCCeEEEEeCcCCCCcccchhhccccCcccceEEEEEEEeeeecccCCCCceEEEEEecCCCE
Q 008888 354 IDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGV 433 (550)
Q Consensus 354 ~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfl~v~~~~vP~V~~~eR~~v~~~~~~g~ 433 (550)
+|+++|++++++.++.|+||||+|+|+. ++++|+++.||+||||++||++||+|++++|+|+||++||+++++++ +|+
T Consensus 456 ~~l~~f~~~l~~~~~~rvpG~avflt~~-~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~-~g~ 533 (622)
T PRK10745 456 NSLEAMIASLEKSPPVRVPGTAVYMSRA-INVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLS-PTF 533 (622)
T ss_pred CCHHHHHHHhhhcCCCccCeEEEEEeCC-CCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEEC-CCE
Confidence 9999999999877778999999999999 99999999999999999999999999999999999999999999999 899
Q ss_pred EEEEEEEeeeccccCCccchHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHHhccCceEEEEEeeEEEecCCCchHH
Q 008888 434 YGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFD 513 (550)
Q Consensus 434 ~rv~~ryGf~e~~~v~~~~f~~~il~~l~~~i~~~~~~~~s~~~~~~~e~~~L~~a~~~~~~y~lg~~~l~~~~~~~~~~ 513 (550)
|||++||||||+||+|+ +++++++ ++. +++++| ++||+||++++++++++ +.
T Consensus 534 ~rv~~~yGf~e~~~i~~------~L~~~~~----~g~------~~~~~~-----------~s~fl~r~~l~~~~~~~-m~ 585 (622)
T PRK10745 534 WRVVASYGWRETPNVEE------VFHRCGL----EGL------SCRMME-----------TSFFMSHESLILGKRPW-YL 585 (622)
T ss_pred EEEEEEecCCCCCCHHH------HHHHHHh----CCC------CCCccc-----------eEEEEeeEEEEeCCCCC-cH
Confidence 99999999999999988 8877754 232 445555 99999999999887777 88
Q ss_pred HHHHHHHHHHHHhccCCCCcccCCCCCeEEEEEEEEC
Q 008888 514 RIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYEA 550 (550)
Q Consensus 514 ~~~~~lf~~L~rn~~~~~~~f~lP~~rvvevG~~~~i 550 (550)
+|+.++|.+|+||+++++++|+||+|||||+|+|+|+
T Consensus 586 ~wr~~lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 586 RLRGKLFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred HHHHHHHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 8888899999999999999999999999999999996
No 5
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=8.3e-169 Score=1394.15 Aligned_cols=516 Identities=37% Similarity=0.722 Sum_probs=492.4
Q ss_pred ccc-CceeehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcce
Q 008888 34 YDI-SALVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEG 112 (550)
Q Consensus 34 ~~~-~~~Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g 112 (550)
+.+ +++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||..|
T Consensus 267 p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~g 346 (852)
T PLN00151 267 PGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKA 346 (852)
T ss_pred CcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCce
Confidence 355 7899999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred eeeecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCCcccccccccccccchHHHHHHHH
Q 008888 113 WLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIAT 192 (550)
Q Consensus 113 ~~~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~vilAt 192 (550)
|.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||
T Consensus 347 w~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAt 426 (852)
T PLN00151 347 WSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIAN 426 (852)
T ss_pred EEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHHH
Q 008888 193 LAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLV 272 (550)
Q Consensus 193 lAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~t 272 (550)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++|
T Consensus 427 lAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~v 506 (852)
T PLN00151 427 LAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGV 506 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHhhhhhhhhhhhHHHHHHHHHhC
Q 008888 273 MLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTH 352 (550)
Q Consensus 273 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~ 352 (550)
|++||+|+++||+.+||||++++++++++|+++|++|||||+.||+||||+||++|++++++|++||+|++++++++.++
T Consensus 507 M~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~ 586 (852)
T PLN00151 507 MMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQ 586 (852)
T ss_pred hhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHhhhCCCCCcccCCeEEEEeCcCCCCcccchhhccccCcccceEEEEEEEeeeecccCCCCceEEEEEecCC-
Q 008888 353 KIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLK- 431 (550)
Q Consensus 353 ~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfl~v~~~~vP~V~~~eR~~v~~~~~~- 431 (550)
++|++++.+..++.++.||||+|+|||++ .+++|++|.||++|||++||++||+|+|++|+|+||++||+++++++++
T Consensus 587 ~vs~~~~~~L~~~~~~~RVpGiglf~t~~-~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~ 665 (852)
T PLN00151 587 KLSMDLMRELGSNLGTIRAPGIGLLYNEL-VKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKD 665 (852)
T ss_pred CCCHHHHHHhcccCCCcccCcEEEEecCC-CCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCC
Confidence 99999998777777788999999999999 9999999999999999999999999999999999999999999999842
Q ss_pred -CEEEEEEEEeeeccccCCccchHHHHHHHHHHHHHhhccCC-----------CC-----------------C-------
Q 008888 432 -GVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCL-----------PS-----------------N------- 475 (550)
Q Consensus 432 -g~~rv~~ryGf~e~~~v~~~~f~~~il~~l~~~i~~~~~~~-----------~s-----------------~------- 475 (550)
|+|||++||||||..+.+.++||++++++++++++.|.... .+ .
T Consensus 666 ~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (852)
T PLN00151 666 YHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLA 745 (852)
T ss_pred CCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCCcccccccccccc
Confidence 89999999999999755678999999999999986443100 00 0
Q ss_pred -------------------------------CcchHHHHHHHHHhccCceEEEEEeeEEEecCCCchHHHHHHH-HHHHH
Q 008888 476 -------------------------------PVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYEVL 523 (550)
Q Consensus 476 -------------------------------~~~~~~e~~~L~~a~~~~~~y~lg~~~l~~~~~~~~~~~~~~~-lf~~L 523 (550)
.+..++|+++|++|+++|+.|++||..++++++++|.||+.++ .|.||
T Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fL 825 (852)
T PLN00151 746 DYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFL 825 (852)
T ss_pred cccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHH
Confidence 0011468889999999999999999999999999999999999 78999
Q ss_pred HHhccCCCCcccCCCCCeEEEEEEEEC
Q 008888 524 HSNCRSALPALSVPLSQRIEVGMLYEA 550 (550)
Q Consensus 524 ~rn~~~~~~~f~lP~~rvvevG~~~~i 550 (550)
|||||++...+++||++++||||+|++
T Consensus 826 RkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 826 RKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999986
No 6
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=8.9e-168 Score=1387.65 Aligned_cols=513 Identities=39% Similarity=0.746 Sum_probs=486.2
Q ss_pred cCcee-ehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcceee
Q 008888 36 ISALV-EALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWL 114 (550)
Q Consensus 36 ~~~~V-vpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~~ 114 (550)
.++++ +||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||..||.
T Consensus 193 ~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~ 272 (779)
T PLN00149 193 HHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWM 272 (779)
T ss_pred cCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeE
Confidence 45566 99999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred eecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCC---cccccccccccccchHHHHHHH
Q 008888 115 LLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPN---DHEDGFYKFIPKSVYWPIFIIA 191 (550)
Q Consensus 115 ~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~---~~~npFf~~~P~~~~~P~vilA 191 (550)
+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||+|++||+ +.+||||+++|+|++||++++|
T Consensus 273 ~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlA 352 (779)
T PLN00149 273 SLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIA 352 (779)
T ss_pred eecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999997 4566999999999999999999
Q ss_pred HHHHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHH
Q 008888 192 TLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSL 271 (550)
Q Consensus 192 tlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~ 271 (550)
|+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++
T Consensus 353 tlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~ 432 (779)
T PLN00149 353 ILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVIT 432 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecChHHHHHHhhhhheh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHhhhhhhhhhhhHHHHHHHHHh
Q 008888 272 VMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELT 351 (550)
Q Consensus 272 tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~ 351 (550)
||++||+|++++++.+|||+++++++++++|+++|+.|||||+.|++||||+||++|++++++|++||+|++++++++.+
T Consensus 433 vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~ 512 (779)
T PLN00149 433 VMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQ 512 (779)
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHhhhCCCCCcccCCeEEEEeCcCCCCcccchhhccccCcccceEEEEEEEeeeecccCCCCceEEEEEecCC
Q 008888 352 HKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLK 431 (550)
Q Consensus 352 ~~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfl~v~~~~vP~V~~~eR~~v~~~~~~ 431 (550)
+++|++++.+..++.++.||||+|+|+|++ .+++|++|.||++|||++||++||+|++++|+|+||++||+++++++++
T Consensus 513 ~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~-~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~ 591 (779)
T PLN00149 513 NKVSINWLLSLGPSLGIVRVRGIGLIHTEL-VSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPK 591 (779)
T ss_pred cCCCHHHHHHhccCCCCcccCcEEEEEcCC-CCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCC
Confidence 999999996655556578999999999999 9999999999999999999999999999999999999999999999933
Q ss_pred --CEEEEEEEEeeeccccCCccchHHHHHHHHHHHHHhhccCCC------------------------------CC----
Q 008888 432 --GVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLP------------------------------SN---- 475 (550)
Q Consensus 432 --g~~rv~~ryGf~e~~~v~~~~f~~~il~~l~~~i~~~~~~~~------------------------------s~---- 475 (550)
++|||++||||||... +.+|||++++++++++++.|..+.. ++
T Consensus 592 ~~~~~r~vvryGy~d~~~-d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (779)
T PLN00149 592 EYRLYRCIVRYGYRDVHK-DDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHLEGIQLREDDSDKQ 670 (779)
T ss_pred CceEEEEEEEEeeccccc-cchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 3999999999999964 6789999999999999865420000 00
Q ss_pred ---------------------------------CcchHHHHHHHHHhccCceEEEEEeeEEEecCCCchHHHHHHH-HHH
Q 008888 476 ---------------------------------PVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYE 521 (550)
Q Consensus 476 ---------------------------------~~~~~~e~~~L~~a~~~~~~y~lg~~~l~~~~~~~~~~~~~~~-lf~ 521 (550)
.+..++|+++|++|+++|+.|++||+.++++++++|.||+.++ .|.
T Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~ 750 (779)
T PLN00149 671 EPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYD 750 (779)
T ss_pred ccccccccccccCccccCcccceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHH
Confidence 0011478889999999999999999999999999999999999 999
Q ss_pred HHHHhccCCCCcccCCCCCeEEEEEEEEC
Q 008888 522 VLHSNCRSALPALSVPLSQRIEVGMLYEA 550 (550)
Q Consensus 522 ~L~rn~~~~~~~f~lP~~rvvevG~~~~i 550 (550)
|||||||++...++|||+|++||||.||+
T Consensus 751 FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 751 FLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHhccCcccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999986
No 7
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-165 Score=1313.44 Aligned_cols=486 Identities=34% Similarity=0.601 Sum_probs=476.4
Q ss_pred cccCceeehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCccee
Q 008888 34 YDISALVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGW 113 (550)
Q Consensus 34 ~~~~~~Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~ 113 (550)
|.++++|+|+|++||++||++||+||++||++|||||++||.++|++|++||.+ ||+||+|+||+||++|+.++|..||
T Consensus 142 p~~~~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~~~~~~gf 220 (627)
T COG3158 142 PALDPYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLLEEGFVGF 220 (627)
T ss_pred ccccCccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHHhCCceEE
Confidence 377899999999999999999999999999999999999999999999999997 7999999999999999999999999
Q ss_pred eeecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCCcccccccccccccchHHHHHHHHH
Q 008888 114 LLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATL 193 (550)
Q Consensus 114 ~~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~vilAtl 193 (550)
++||+||||+|||||||||||||||+|||.||+++|+|||+|||+||||++++||++.+||||.++|+|+++|+++|||+
T Consensus 221 ~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP~viLAT~ 300 (627)
T COG3158 221 FVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIPLVILATA 300 (627)
T ss_pred EEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHHHH
Q 008888 194 AAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVM 273 (550)
Q Consensus 194 AtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~tM 273 (550)
||||||||+|||+||++|||||||++|||||.|||+++.||||||.|||+|+++++.++++||||+|||+|||+|||+||
T Consensus 301 ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM 380 (627)
T COG3158 301 ATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTM 380 (627)
T ss_pred HHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhChheeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHhhhhhhhhhhhHHHHHHHHHhCC
Q 008888 274 LITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHK 353 (550)
Q Consensus 274 ~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~ 353 (550)
+|||+|++.++++.|||+++.+.++..+|+++|..||+||+.|++||||+|+++|++++++|+||++|++++.++.++++
T Consensus 381 ~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~~~~~~~~ 460 (627)
T COG3158 381 VITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILFEKTRENG 460 (627)
T ss_pred HHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHhhhCCCCCcccCCeEEEEeCcCCCCcccchhhccccCcccceEEEEEEEeeeecccCCCCceEEEEEecCCCE
Q 008888 354 IDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGV 433 (550)
Q Consensus 354 ~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfl~v~~~~vP~V~~~eR~~v~~~~~~g~ 433 (550)
+|+|.|++++++.++.|+||||+|+|++ ++.+|.+++||+|||+++||++||+|+++.++|+|+++||+++++++ +++
T Consensus 461 i~l~~fi~~l~~~~p~~v~gTAVfLt~~-~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~l~-~~f 538 (627)
T COG3158 461 IPLDAFIASLEKHPPVRVPGTAVFLTRD-PDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQLS-DDF 538 (627)
T ss_pred CCHHHHHHHHhhCCCcccCceEEEEcCC-CCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeeecc-Cce
Confidence 9999999999999999999999999999 99999999999999999999999999999999999999999999999 789
Q ss_pred EEEEEEEeeeccccCCccchHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHHhccCceEEEEEeeEEEecCCCchHH
Q 008888 434 YGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFD 513 (550)
Q Consensus 434 ~rv~~ryGf~e~~~v~~~~f~~~il~~l~~~i~~~~~~~~s~~~~~~~e~~~L~~a~~~~~~y~lg~~~l~~~~~~~~~~ 513 (550)
+|++++|||||+||+|+ +++.|++ +|. +++.|| ++||+||++++++++++ +.
T Consensus 539 ~rV~l~~Gfme~pnvp~------~l~~~~~----~G~------~f~im~-----------tsFfl~re~l~~~~~~g-~~ 590 (627)
T COG3158 539 VRVVLHFGFMETPNVPR------ALRLCRK----KGL------KFDIME-----------TSFFLSRESLIASKNSG-MP 590 (627)
T ss_pred EEEEEEeeccCCCCHHH------HHHHHhh----cCc------eecccc-----------eEEEEEeeeeecCCCCC-ch
Confidence 99999999999999998 9999876 463 777787 99999999999988877 89
Q ss_pred HHHHHHHHHHHHhccCCCCcccCCCCCeEEEEEEEEC
Q 008888 514 RIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYEA 550 (550)
Q Consensus 514 ~~~~~lf~~L~rn~~~~~~~f~lP~~rvvevG~~~~i 550 (550)
+|+.++|.+|+||+.+++++|+||+|||||+|.|+||
T Consensus 591 ~w~~~lfi~l~r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 591 RWRDRLFIALARNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred HHHHHHHHHHHHhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 9999999999999999999999999999999999996
No 8
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=2.5e-151 Score=1223.72 Aligned_cols=410 Identities=43% Similarity=0.817 Sum_probs=405.7
Q ss_pred ccccCceeehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcce
Q 008888 33 VYDISALVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEG 112 (550)
Q Consensus 33 ~~~~~~~Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g 112 (550)
.+.++++|+|+||+||++||++||+||+|||++|||||++||++||++|++||.+ ||+||+|+||+||++|+.+||+.|
T Consensus 125 ~p~~~~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~~~ 203 (534)
T PF02705_consen 125 TPSLEPYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNGWIG 203 (534)
T ss_pred CCCCcceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcCCch
Confidence 3477899999999999999999999999999999999999999999999999998 599999999999999999999999
Q ss_pred eeeecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCCcccccccccccccchHHHHHHHH
Q 008888 113 WLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIAT 192 (550)
Q Consensus 113 ~~~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~vilAt 192 (550)
|.+||+|+||+|||||||||||||||+|||+||+++|||||+|||+||||++++||++.+||||+++|+|++||++++||
T Consensus 204 ~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAt 283 (534)
T PF02705_consen 204 FFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILAT 283 (534)
T ss_pred hhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHHH
Q 008888 193 LAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLV 272 (550)
Q Consensus 193 lAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~t 272 (550)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||+|||+|||+|||+|
T Consensus 284 lAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~t 363 (534)
T PF02705_consen 284 LATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGT 363 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHhhhhhhhhhhhHHHHHHHHHhC
Q 008888 273 MLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTH 352 (550)
Q Consensus 273 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~ 352 (550)
|++||+|++++++.+||||++++.+++++|+.+|+.||+||+.|++||||+|+++|++++++|+||++||++++++++++
T Consensus 364 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~ 443 (534)
T PF02705_consen 364 MLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFEREN 443 (534)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHhhhCCCCCcccCCeEEEEeCcCCCCcccchhhccccCcccceEEEEEEEeeeecccCCCCceEEEEEecCCC
Q 008888 353 KIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKG 432 (550)
Q Consensus 353 ~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfl~v~~~~vP~V~~~eR~~v~~~~~~g 432 (550)
++++++|+++.++.++.|+||+|+|+|+. ++++|+++.||+|||+++||+++|++++++|+|+||++||+++++++++|
T Consensus 444 ~~~~~~~~~~~~~~~~~rvpG~aVFlt~~-~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~~g 522 (534)
T PF02705_consen 444 KLPLDDFLELLEDQSIPRVPGTAVFLTRS-PDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGPDG 522 (534)
T ss_pred CCCHHHHHHhhhhCCCceecceEEEEcCC-CccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecCCC
Confidence 99999999999998999999999999999 99999999999999999999999999999999999999999999999899
Q ss_pred EEEEEEEEeeec
Q 008888 433 VYGCVIQYGYAD 444 (550)
Q Consensus 433 ~~rv~~ryGf~e 444 (550)
+|||++||||||
T Consensus 523 ~~rv~~ryGf~e 534 (534)
T PF02705_consen 523 FYRVTLRYGFME 534 (534)
T ss_pred EEEEEEEecCCC
Confidence 999999999998
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=93.76 E-value=0.16 Score=55.86 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=49.0
Q ss_pred ehhHHHHHHHHHhhhcccccccccc---chhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcceee-ee
Q 008888 41 EALSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWL-LL 116 (550)
Q Consensus 41 vpis~~ILv~LF~iQ~~GT~kvg~~---FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~~-~L 116 (550)
..+++++++++..+.-+|....+++ ++-+.++=++.+.+.|++.+.+.+++ ..+|...+.-. .++..++. .+
T Consensus 166 ~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a~ 241 (501)
T TIGR00911 166 RLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLAF 241 (501)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHHH
Confidence 4567778888889999997666554 33222222233334555554321111 11222111000 01122332 45
Q ss_pred cceeeeecchhhhhhccC--CCCccchhhhhH
Q 008888 117 GGTVLCITGSEALFADLG--HFNRSSIQMAFL 146 (550)
Q Consensus 117 G~V~L~vTGaEALyADmG--HFg~~~Ir~aW~ 146 (550)
..++.+.+|-|+.=.--| +--+|+|..+-.
T Consensus 242 ~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~ 273 (501)
T TIGR00911 242 YSGIWAYGGWNYLNFVTEEVKNPYRTLPIAII 273 (501)
T ss_pred HHHHHHHHhHHHHhhhHHHhcCchhhhHHHHH
Confidence 566778888886533222 333455555433
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=82.73 E-value=11 Score=40.26 Aligned_cols=180 Identities=16% Similarity=0.050 Sum_probs=100.6
Q ss_pred ceeehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcceeeeec
Q 008888 38 ALVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLG 117 (550)
Q Consensus 38 ~~Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~~~LG 117 (550)
-....++.+++..++.++-+|....++...-...+=+..+.++++..+...+......+++... .......-...++
T Consensus 132 ~~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 208 (466)
T COG0531 132 LLIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAIL 208 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHH
Confidence 3567889999999999999999988887666555555555555555444332221222221111 0000001234456
Q ss_pred ceeeeecchhhh--hhc-cCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCC-ccc-----cccccc---cc-ccch
Q 008888 118 GTVLCITGSEAL--FAD-LGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPN-DHE-----DGFYKF---IP-KSVY 184 (550)
Q Consensus 118 ~V~L~vTGaEAL--yAD-mGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~-~~~-----npFf~~---~P-~~~~ 184 (550)
.++.+.+|-|+. +|+ +=+ .+|+|-.+-..-..-+.++-.+++-+....-|. +.. +|+... .. .+..
T Consensus 209 ~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~ 287 (466)
T COG0531 209 LAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGA 287 (466)
T ss_pred HHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHH
Confidence 668889998865 332 434 555566555543333333333333333322222 111 454322 22 3566
Q ss_pred HHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCcc
Q 008888 185 WPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 221 (550)
Q Consensus 185 ~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr 221 (550)
+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 288 ~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 288 IIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 6666666666666667777777777778888999998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=81.58 E-value=8 Score=41.34 Aligned_cols=209 Identities=13% Similarity=0.115 Sum_probs=96.8
Q ss_pred hHHHHHHHHHhhhcccccccccc---chhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcCcce-eeeecc
Q 008888 43 LSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEG-WLLLGG 118 (550)
Q Consensus 43 is~~ILv~LF~iQ~~GT~kvg~~---FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g-~~~LG~ 118 (550)
++++++++...+..+|.+..+++ ++.+.++=++.+.+.|+.+.. +.-+..+.|. +..+ ...+..
T Consensus 136 ~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~~~~~~ 203 (429)
T TIGR00909 136 PALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHFA---SNNYTPFMPM---------GFGGVGAATAL 203 (429)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhCc---HHhcCCCCCC---------cHHHHHHHHHH
Confidence 45677778888899897666554 666555544444445554332 2222222221 1111 112233
Q ss_pred eeeeecchhhhhh--ccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcC-C-C---cccccccc----cccccchHHH
Q 008888 119 TVLCITGSEALFA--DLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRH-P-N---DHEDGFYK----FIPKSVYWPI 187 (550)
Q Consensus 119 V~L~vTGaEALyA--DmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~-p-~---~~~npFf~----~~P~~~~~P~ 187 (550)
.+.+.+|=|+.-. +-=+-.+|++.++-..-+. ...+.|..-....... | + +.++|+.. ...++..+-+
T Consensus 204 ~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~-~~~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (429)
T TIGR00909 204 VFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI-VVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLIL 282 (429)
T ss_pred HHHHHhhHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHHH
Confidence 4566677776643 3334455677766553222 2222244433222211 1 1 11234322 2234444444
Q ss_pred HHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeEEEeCCcchhhhhhhh
Q 008888 188 FIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGV 267 (550)
Q Consensus 188 vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGi 267 (550)
.+.+.++..-+..+.+.+.==+...+-+.|.+|+. .-+++++. | .|..--++......+...+.+.+.+.+..++
T Consensus 283 ~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~-~~~~~~~~-~---~P~~a~~~~~~i~~~~~~~~~~~~l~~~~~~ 357 (429)
T TIGR00909 283 TAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS-LSKVHPKT-G---TPHMSIIIFSLTAALLASLVPLEGLAELTSI 357 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH-HHHcCCCC-C---CcHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 45555555555555555555555566688999972 22333221 2 6754333322222222334444555554444
Q ss_pred hh
Q 008888 268 VV 269 (550)
Q Consensus 268 AV 269 (550)
+.
T Consensus 358 ~~ 359 (429)
T TIGR00909 358 GT 359 (429)
T ss_pred HH
Confidence 43
No 12
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=80.91 E-value=5.9 Score=42.10 Aligned_cols=224 Identities=13% Similarity=0.108 Sum_probs=121.8
Q ss_pred ehhHHHHHHHHHhhhcccccccccc---chhHHH-HHHHHhhHhhHHHhhccCcce-----eEecChHHHHHHhhhcCcc
Q 008888 41 EALSAIILIVLFLMQKFGTSRVSFL---FSPIMG-AWTFSTPLVGIYSIIHHYPGI-----FKALSPHYTFHFFWRKGKE 111 (550)
Q Consensus 41 vpis~~ILv~LF~iQ~~GT~kvg~~---FgPIml-vWF~~l~~~Gi~~I~~~~P~V-----l~AlnP~yai~f~~~~~~~ 111 (550)
..+++++++....+.-+|....+++ .+=+.+ .-++.+.++|++...++ ..- ....+|. +..
T Consensus 119 ~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~ 188 (426)
T PF13520_consen 119 FLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSFS-GFNSLSFSLSTFFPS---------GWP 188 (426)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCC-HHH----SHSCSSCS---------SSS
T ss_pred eeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeeccc-ccccccccccccCCc---------ccc
Confidence 4567788888889999998777666 332333 34445556666655421 110 1111221 111
Q ss_pred -eeeeecceeeeecchhhhhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhhcCCCc-c---cc------cccccc-
Q 008888 112 -GWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPND-H---ED------GFYKFI- 179 (550)
Q Consensus 112 -g~~~LG~V~L~vTGaEALyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll~~p~~-~---~n------pFf~~~- 179 (550)
-+..++..+.+.+|-|+.=.-.+-..+|.+.++-..-+.-+.++--+..-++...-|++ . +| .+++..
T Consensus 189 ~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (426)
T PF13520_consen 189 GFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAVG 268 (426)
T ss_dssp HHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHH
T ss_pred chhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhcccc
Confidence 13445667889999998655555555567776655422222222222222222222221 1 12 222332
Q ss_pred cccchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhh-eeE--EEeC
Q 008888 180 PKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCV-AVI--LIFG 256 (550)
Q Consensus 180 P~~~~~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNwlL~i~~i-~vv--l~F~ 256 (550)
.++..+.+.+.+.+++.-+-.+.+.+.--++.+.-+-|.+|+ +..++++ +| .|..-.++...+. ++. ..+-
T Consensus 269 ~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~~ 342 (426)
T PF13520_consen 269 GSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLFLFI 342 (426)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHHHhh
Confidence 357777888887887777777777777777888888999994 3334442 23 3554444433332 222 2232
Q ss_pred ---CcchhhhhhhhhhHHHHHHHHHHH
Q 008888 257 ---EGKDIGNAFGVVVSLVMLITTILL 280 (550)
Q Consensus 257 ---~S~~La~AYGiAVt~tM~iTT~L~ 280 (550)
+.+.+.+.+.++.....+++.+-.
T Consensus 343 ~~~~~~~l~~~~~~~~~~~~~~~~~~~ 369 (426)
T PF13520_consen 343 PQSSFDILVSLSSVGYLISYILVILAV 369 (426)
T ss_dssp SSSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335667777777666666664443
No 13
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=79.51 E-value=9.2 Score=41.83 Aligned_cols=34 Identities=9% Similarity=0.118 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCc
Q 008888 187 IFIIATLAAIVASQSLISATFSVIKQSVVLDYFP 220 (550)
Q Consensus 187 ~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~P 220 (550)
+.+++.++.+-+..+.+.++--+....-+-|.+|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~sR~l~a~ardg~lP 341 (482)
T TIGR00907 308 LLCLILVTSFFCAITCMTANSRMIYAFSRDGGLP 341 (482)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 3344444445555555666666666677889999
No 14
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=77.91 E-value=23 Score=38.72 Aligned_cols=19 Identities=11% Similarity=0.322 Sum_probs=14.2
Q ss_pred cchHHHHHHHhhhhhhhhh
Q 008888 321 GWIPFAISFFLAFIMFGWF 339 (550)
Q Consensus 321 GW~pl~ia~~l~~iM~tW~ 339 (550)
-|-+++++++++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777766665
No 15
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=76.07 E-value=24 Score=38.26 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=16.7
Q ss_pred HHHHHHHHHhhhcccccccccc
Q 008888 44 SAIILIVLFLMQKFGTSRVSFL 65 (550)
Q Consensus 44 s~~ILv~LF~iQ~~GT~kvg~~ 65 (550)
+++++..+..+..+|++..+++
T Consensus 125 ~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 125 CIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH
Confidence 4556667788999999877765
No 16
>PRK15049 L-asparagine permease; Provisional
Probab=75.53 E-value=15 Score=40.88 Aligned_cols=175 Identities=17% Similarity=0.149 Sum_probs=76.7
Q ss_pred hHHHHHHHHHhhhcccccccccc---chhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHHhhhcC---ccee---
Q 008888 43 LSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKG---KEGW--- 113 (550)
Q Consensus 43 is~~ILv~LF~iQ~~GT~kvg~~---FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~---~~g~--- 113 (550)
++.++++++..+.-+|....+++ +.=+.++=.+.+.++|+.-+...+|.-- ++ ..+.++.+++ ..|+
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~i~~~~~~iki~~l~~~ii~~i~~~~~~~~~~~---~~-~~f~~~~~~~~~~p~g~~~~ 222 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDG---NT-TGFHLITDNGGFFPHGLLPA 222 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CC-cccccccCCCCcccccHHHH
Confidence 46677778888898997766664 3322222223333444443332111100 00 0111111111 1122
Q ss_pred -eeecceeeeecchhh--hhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhh-----cCCCccccccccccc----c
Q 008888 114 -LLLGGTVLCITGSEA--LFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLI-----RHPNDHEDGFYKFIP----K 181 (550)
Q Consensus 114 -~~LG~V~L~vTGaEA--LyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll-----~~p~~~~npFf~~~P----~ 181 (550)
..+..++.+.+|-|. ..|+==+--+|+|-.|-.. +.-...+.|.|-...+. ++.++...||....- +
T Consensus 223 ~~~~~~~~faf~G~e~i~~~aeE~knP~r~iPrAi~~-~~~~i~~~yi~~~~~~~~~~p~~~~~~~~sP~~~~~~~~g~~ 301 (499)
T PRK15049 223 LVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINS-VIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVP 301 (499)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHheecchhccCcCCCHHHHHHHHcCch
Confidence 112346677888775 3444445556667666543 22233334555322221 223333467654331 1
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCccc
Q 008888 182 SVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRV 222 (550)
Q Consensus 182 ~~~~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~ 222 (550)
+.-.-+.++..+|.+-+..+.+.++--+....-+-|.+|+.
T Consensus 302 ~~~~ii~~~ilia~~ss~ns~~~~~sR~l~a~Ardg~lP~~ 342 (499)
T PRK15049 302 YIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSF 342 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHH
Confidence 11111222222222222223344444455555677999963
No 17
>PRK10655 potE putrescine transporter; Provisional
Probab=69.01 E-value=44 Score=36.00 Aligned_cols=42 Identities=7% Similarity=-0.096 Sum_probs=24.0
Q ss_pred hHHHHHHHHHhhhcccccccccc---chhHHHHHHHHhhHhhHHH
Q 008888 43 LSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYS 84 (550)
Q Consensus 43 is~~ILv~LF~iQ~~GT~kvg~~---FgPImlvWF~~l~~~Gi~~ 84 (550)
+++++++.+..+.-+|++..+++ ..-..++=++.+.+.|...
T Consensus 126 ~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 126 ATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667788899998766664 2223333344444555443
No 18
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=67.05 E-value=41 Score=34.85 Aligned_cols=89 Identities=10% Similarity=0.092 Sum_probs=55.9
Q ss_pred chhhhhhhhhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH----HHHHHHHHhhccccCC-----cc----hHH
Q 008888 259 KDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFT----MEGVYVSAVFTKIPEG-----GW----IPF 325 (550)
Q Consensus 259 ~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~----id~~ff~anl~K~~~G-----GW----~pl 325 (550)
.+-=..||-+|-.|.++.++-+++.+....+.+.+.++++.++++. +|-..+++.-.+-..+ .+ +.+
T Consensus 12 r~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~~~~R~~lAv 91 (301)
T PF14362_consen 12 RNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQALPRLLLAV 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHH
Confidence 3344678999999999999999999888899887776666655554 4554444332221111 11 344
Q ss_pred HHHHHhhhhhhhhhhhHHHHHH
Q 008888 326 AISFFLAFIMFGWFNGRQKKIE 347 (550)
Q Consensus 326 ~ia~~l~~iM~tW~~G~~~~~~ 347 (550)
++|.++...+..+-...++..+
T Consensus 92 liaivIs~pl~l~iF~~eI~~~ 113 (301)
T PF14362_consen 92 LIAIVISEPLELKIFEKEIDQK 113 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555566666666665433
No 19
>PRK10746 putative transport protein YifK; Provisional
Probab=63.77 E-value=73 Score=35.02 Aligned_cols=25 Identities=0% Similarity=-0.028 Sum_probs=17.0
Q ss_pred cchHHHHHHHhhhhhhhhhhhHHHH
Q 008888 321 GWIPFAISFFLAFIMFGWFNGRQKK 345 (550)
Q Consensus 321 GW~pl~ia~~l~~iM~tW~~G~~~~ 345 (550)
.......+...+.++..++...+.-
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~ 451 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLN 451 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567777777777777777665543
No 20
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=58.64 E-value=32 Score=37.24 Aligned_cols=44 Identities=14% Similarity=0.033 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHhhhccccccccc---cchhHHHHHHHHhhHhhHHHh
Q 008888 42 ALSAIILIVLFLMQKFGTSRVSF---LFSPIMGAWTFSTPLVGIYSI 85 (550)
Q Consensus 42 pis~~ILv~LF~iQ~~GT~kvg~---~FgPImlvWF~~l~~~Gi~~I 85 (550)
.+++++++.+..+.-+|.+..++ .+.=+.++=++.+.++|+...
T Consensus 129 ~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45566666677888888764443 344333343444555566543
No 21
>PRK10249 phenylalanine transporter; Provisional
Probab=58.03 E-value=62 Score=35.44 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=57.6
Q ss_pred hHHHHHHHHHhhhcccccccccc---chhHHHHHHHHhhHhhHHHhhccCcceeEecChHHHHHH--hhhcCcce-eeee
Q 008888 43 LSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF--FWRKGKEG-WLLL 116 (550)
Q Consensus 43 is~~ILv~LF~iQ~~GT~kvg~~---FgPImlvWF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f--~~~~~~~g-~~~L 116 (550)
++.++++++..+.-+|....|++ +.=+-++..+.+.++|+.-+...++.- ..++.+.... +..++..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 35666777778888888766654 233334444555556665443322210 1111110000 00122233 2345
Q ss_pred cceeeeecchhhh--hhccCCCCccchhhhhHHHHHHHHHHhccc
Q 008888 117 GGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAG 159 (550)
Q Consensus 117 G~V~L~vTGaEAL--yADmGHFg~~~Ir~aW~~~V~PaLiLnY~G 159 (550)
..++.+.+|-|.. .|+=-+-.+|+|-.+-.. ......+-|++
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~~-~~~~~~~~y~~ 259 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVNQ-VVYRILLFYIG 259 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHH
Confidence 5567788898865 666566677777666553 22333444444
No 22
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=53.02 E-value=1.5e+02 Score=33.59 Aligned_cols=45 Identities=13% Similarity=0.310 Sum_probs=26.5
Q ss_pred eehhHHHHHHHHHhhhcccccccccc---chhHHHHHHHHhhHhhHHH
Q 008888 40 VEALSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYS 84 (550)
Q Consensus 40 Vvpis~~ILv~LF~iQ~~GT~kvg~~---FgPImlvWF~~l~~~Gi~~ 84 (550)
...+++++++.+..+--+|+...+++ +.-+-++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 34466777777778888998766654 3333333334444555543
No 23
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=47.45 E-value=16 Score=37.42 Aligned_cols=40 Identities=25% Similarity=0.580 Sum_probs=31.4
Q ss_pred HHHHHhhcccc------CCcchHHHHHHHhhhhhhhhhhhHHHHHH
Q 008888 308 VYVSAVFTKIP------EGGWIPFAISFFLAFIMFGWFNGRQKKIE 347 (550)
Q Consensus 308 ~ff~anl~K~~------~GGW~pl~ia~~l~~iM~tW~~G~~~~~~ 347 (550)
.|+++-..-+. +|||..++.++++..+...|+|--+.+.+
T Consensus 243 VFl~~W~~~~~d~~~~i~~G~isiv~Gliiv~iLii~N~kvEv~AR 288 (304)
T COG4059 243 VFLSSWVTTVFDPAVSIQGGWISIVAGLIIVLILIIWNRKVEVKAR 288 (304)
T ss_pred hhhhhhhhhhcCcccccccchhhhHHHHHHHHHHHHhcchhhhhhh
Confidence 45555555444 79999999999999999999997776644
No 24
>PRK11021 putative transporter; Provisional
Probab=47.43 E-value=2.2e+02 Score=30.37 Aligned_cols=172 Identities=16% Similarity=0.144 Sum_probs=76.8
Q ss_pred eehhHHHHHHHHHhhhccccccccccchhHHHHHHHHhhHhhHHHhhc-cCcceeEecChHHHHHHhhhcCccee-eeec
Q 008888 40 VEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIH-HYPGIFKALSPHYTFHFFWRKGKEGW-LLLG 117 (550)
Q Consensus 40 Vvpis~~ILv~LF~iQ~~GT~kvg~~FgPImlvWF~~l~~~Gi~~I~~-~~P~Vl~AlnP~yai~f~~~~~~~g~-~~LG 117 (550)
..++++++++.+..+.-+|.+..+++-.=+. ++.+.++++.-... .+++-+ .+++ ...++..++ ..+.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 184 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQTVIA---LLIVALVVAIWWAGDIKPADI-PFPA------PGSIEWSGLFAALG 184 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHcCCchhcC-CCCC------CCCccHHHHHHHHH
Confidence 3567788888889999999888877633111 12222223221111 112211 0110 001122222 2234
Q ss_pred ceeeeecchhhh--hhccCCCCccchhhhhHHHHHHHHHHhcccchhhhh-----cCCCcccccc----cccccccchHH
Q 008888 118 GTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLI-----RHPNDHEDGF----YKFIPKSVYWP 186 (550)
Q Consensus 118 ~V~L~vTGaEAL--yADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll-----~~p~~~~npF----f~~~P~~~~~P 186 (550)
..+.+.+|-|+. +|+==+-.+|++.++-..-+. ...+-|+.-....+ ++++....|+ .+...++..+-
T Consensus 185 ~~~~af~G~e~~~~~a~E~k~P~k~iPrAi~~~~~-~~~~lYil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i 263 (410)
T PRK11021 185 VMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLL-LAGLVYWACTVVVLHFPAYGDKQAAAASLPGIFVQLFGGYALWV 263 (410)
T ss_pred HHHHHHhcHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHHhcCCCcchhhccccHHHHHHHHhCchhHHH
Confidence 456677888865 444445566777766654222 23333444332222 1221122332 22222332222
Q ss_pred HHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCccc
Q 008888 187 IFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRV 222 (550)
Q Consensus 187 ~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~ 222 (550)
+.+++.++++-+-.+.+.+.=-+....-+-|.+||.
T Consensus 264 i~i~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 299 (410)
T PRK11021 264 ICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSY 299 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHH
Confidence 222223333223333333443444555578999973
No 25
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=46.30 E-value=74 Score=34.33 Aligned_cols=23 Identities=17% Similarity=0.309 Sum_probs=17.2
Q ss_pred hHHHHHHHHHhhhcccccccccc
Q 008888 43 LSAIILIVLFLMQKFGTSRVSFL 65 (550)
Q Consensus 43 is~~ILv~LF~iQ~~GT~kvg~~ 65 (550)
+++++++.+..+.-+|++..+++
T Consensus 124 ~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 124 AALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH
Confidence 55666667778888898877775
No 26
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=45.21 E-value=1.2e+02 Score=33.40 Aligned_cols=42 Identities=14% Similarity=-0.046 Sum_probs=24.5
Q ss_pred cccchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCcc
Q 008888 180 PKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 221 (550)
Q Consensus 180 P~~~~~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr 221 (550)
.++...-+.+.+.+++.-+..+.+.+.--+..+.-+-|.+||
T Consensus 279 g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~ 320 (473)
T TIGR00905 279 GKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPK 320 (473)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 344433333334444444445556666666677778999997
No 27
>PRK10238 aromatic amino acid transporter; Provisional
Probab=43.72 E-value=1.6e+02 Score=32.14 Aligned_cols=173 Identities=15% Similarity=0.128 Sum_probs=78.4
Q ss_pred hHHHHHHHHHhhhcccccccccc---chhHHHHHHHHhhHhhHHHhhcc--Ccc-eeEecChHHHHHHhhhcCccee-ee
Q 008888 43 LSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYSIIHH--YPG-IFKALSPHYTFHFFWRKGKEGW-LL 115 (550)
Q Consensus 43 is~~ILv~LF~iQ~~GT~kvg~~---FgPImlvWF~~l~~~Gi~~I~~~--~P~-Vl~AlnP~yai~f~~~~~~~g~-~~ 115 (550)
.++++++.++.+.-+|+...|++ +.-+-++-++.+-++|+.-+... +|. .+.-+.+. .-+..++..++ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 45555667788888998776664 22222222222333344433321 121 11111000 00001121222 23
Q ss_pred ecceeeeecchhh--hhhccCCCCccchhhhhHHHHHHHHHHhcccchhhhh--cCCCc---cccccccccc----ccch
Q 008888 116 LGGTVLCITGSEA--LFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLI--RHPND---HEDGFYKFIP----KSVY 184 (550)
Q Consensus 116 LG~V~L~vTGaEA--LyADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll--~~p~~---~~npFf~~~P----~~~~ 184 (550)
++.++.+.+|-|+ ..|+=-+=.+|++-+|-.. +.....+.|++=-+.++ .++++ ...||-...= ++..
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~~~~~~~~~~p~~~l~~~~sP~~~~~~~~g~~~~~ 284 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVA 284 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHheecChhccCCCCCcHHHHHHHcCChHHH
Confidence 4556778889887 4455456677778777653 34455556665333222 22222 2457643221 1111
Q ss_pred ---HHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCccc
Q 008888 185 ---WPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRV 222 (550)
Q Consensus 185 ---~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~ 222 (550)
..+++++.+++.. +.+.++=-++...-+-|.+|+.
T Consensus 285 ~i~~~~i~~~~~s~~~---~~~~~~sR~l~a~ardg~lP~~ 322 (456)
T PRK10238 285 NALNIVVLTAALSVYN---SCVYCNSRMLFGLAQQGNAPKA 322 (456)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhCCCccHH
Confidence 1222333333333 3233333344445577999963
No 28
>TIGR00930 2a30 K-Cl cotransporter.
Probab=40.93 E-value=2e+02 Score=35.21 Aligned_cols=25 Identities=12% Similarity=0.125 Sum_probs=18.3
Q ss_pred ehhHHHHHHHHHhhhcccccccccc
Q 008888 41 EALSAIILIVLFLMQKFGTSRVSFL 65 (550)
Q Consensus 41 vpis~~ILv~LF~iQ~~GT~kvg~~ 65 (550)
--+++++++++..+--+|....+++
T Consensus 204 ~iia~i~l~ll~~In~~Gvk~~ak~ 228 (953)
T TIGR00930 204 RIYGTVTVVVLLGISFAGMEWENKA 228 (953)
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3467788888888888998655553
No 29
>PRK10580 proY putative proline-specific permease; Provisional
Probab=39.49 E-value=1.4e+02 Score=32.49 Aligned_cols=24 Identities=8% Similarity=0.084 Sum_probs=18.3
Q ss_pred CCcchHHHHHHHhhhhhhhhhhhH
Q 008888 319 EGGWIPFAISFFLAFIMFGWFNGR 342 (550)
Q Consensus 319 ~GGW~pl~ia~~l~~iM~tW~~G~ 342 (550)
.+.++.+.++...+.+.+.++.-.
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~ 446 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFK 446 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888888888887654
No 30
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=37.77 E-value=3e+02 Score=30.12 Aligned_cols=44 Identities=11% Similarity=-0.124 Sum_probs=29.7
Q ss_pred ccccchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCccc
Q 008888 179 IPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRV 222 (550)
Q Consensus 179 ~P~~~~~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr~ 222 (550)
..+|..+.+.+.+.+++.-+..+.+.++--+..++-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34555555555556666666666666676777777899999974
No 31
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=36.52 E-value=3e+02 Score=30.83 Aligned_cols=42 Identities=14% Similarity=0.149 Sum_probs=22.9
Q ss_pred ceeeeecchhhh--hhccCCCCccchhhhhHHHHHHHHHHhccc
Q 008888 118 GTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAG 159 (550)
Q Consensus 118 ~V~L~vTGaEAL--yADmGHFg~~~Ir~aW~~~V~PaLiLnY~G 159 (550)
+++.+.+|-|+. .|+==+--+|++-.|-..-+.-+.++.++|
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~ 245 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIG 245 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHH
Confidence 345567888875 455445556666665554333344444443
No 32
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=35.41 E-value=4.4e+02 Score=28.56 Aligned_cols=176 Identities=18% Similarity=0.159 Sum_probs=76.2
Q ss_pred hhHHHHHHHHHhhhccccccccccchhH---HHHHHHHhhHhhHHHhhccCcce----eEecChHHHHHHhhhcCcce-e
Q 008888 42 ALSAIILIVLFLMQKFGTSRVSFLFSPI---MGAWTFSTPLVGIYSIIHHYPGI----FKALSPHYTFHFFWRKGKEG-W 113 (550)
Q Consensus 42 pis~~ILv~LF~iQ~~GT~kvg~~FgPI---mlvWF~~l~~~Gi~~I~~~~P~V----l~AlnP~yai~f~~~~~~~g-~ 113 (550)
.+++++++.+..+.-+|+...+++--.. .++-++.+.++|+..+...+|.. +.-+.+.-+ + ..++..+ +
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~g~~~~~ 204 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIFGFAPGSEVSGFSNLTGKGG--F-FPNGIGAVL 204 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCccccccCCCC--c-CcccHHHHH
Confidence 3566666667778889987777664332 22233333445554443222321 111111000 0 0111111 1
Q ss_pred eeecceeeeecchhhh--hhccCCCCccchhhhhHHHHHHHHHHhcccchhhhh-----cCCCccc-ccccccc----cc
Q 008888 114 LLLGGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLI-----RHPNDHE-DGFYKFI----PK 181 (550)
Q Consensus 114 ~~LG~V~L~vTGaEAL--yADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll-----~~p~~~~-npFf~~~----P~ 181 (550)
..+...+.+.+|-|+. .|+-=+--+|+|..+-.. +.....+.|+.=-.... ++++..+ .||-... .+
T Consensus 205 ~a~~~~~~af~G~e~~~~~a~E~k~P~r~iPrAi~~-~~~~~~~~y~l~~~~~~~~~p~~~~~~~~~~p~~~~~~~~g~~ 283 (452)
T TIGR01773 205 LAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNS-VIWRIIVFYLGSIFIVVALLPWNSPNLLEVGSYVAVLELLGIP 283 (452)
T ss_pred HHHHHHHHHhccHHHHhHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHeeEeCCCCcccccCCcHHHHHHHcCCh
Confidence 2334456677788864 233334445667666432 22233444554222111 1112112 2543221 12
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCcc
Q 008888 182 SVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 221 (550)
Q Consensus 182 ~~~~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr 221 (550)
+...-+.+++.++.+-+..+.+.++--+....-+-|.+|+
T Consensus 284 ~~~~ii~~~~~~~~~~~~~~~~~~~sR~~~a~ardg~lP~ 323 (452)
T TIGR01773 284 HAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPR 323 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 2222222222233333334445555555556668899995
No 33
>PRK11387 S-methylmethionine transporter; Provisional
Probab=34.75 E-value=2.6e+02 Score=30.64 Aligned_cols=21 Identities=10% Similarity=0.102 Sum_probs=13.3
Q ss_pred HHHHHHHHHhhhccccccccc
Q 008888 44 SAIILIVLFLMQKFGTSRVSF 64 (550)
Q Consensus 44 s~~ILv~LF~iQ~~GT~kvg~ 64 (550)
.+++++.+..+.-+|+...++
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 344455667778888776554
No 34
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=32.76 E-value=4.3e+02 Score=29.63 Aligned_cols=126 Identities=18% Similarity=0.246 Sum_probs=65.3
Q ss_pred HHHhhhhhhhchhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHH-------------HHHHHh-heeEEEeC----
Q 008888 195 AIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNY-------------ILMILC-VAVILIFG---- 256 (550)
Q Consensus 195 tIIASQA~ISG~FSl~~QAi~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw-------------lL~i~~-i~vvl~F~---- 256 (550)
+.+.-||.+-| |-..--|+.+|..| +|..|++-.=. +++... ++++.+=|
T Consensus 112 aLvqvQatvvg-fla~i~a~~lg~~p-----------~~~~~~~~~llL~~SSv~ta~las~vl~~lmv~vIi~srk~~i 179 (441)
T KOG3788|consen 112 ALVQVQATVVG-FLAAIAAIALGIIP-----------EGDFDIEHSLLLCASSVATATLASLVLGILMVVVIIGSRKYDI 179 (441)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhccCc-----------cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccCC
Confidence 34555666554 33344578899999 47777774322 111111 12222222
Q ss_pred CcchhhhhhhhhhHHHHHHHHHHHHHH--HHHHhccchhHHHHHHHHHHHHHH-----HHHHHhhccccCCcchHHHHHH
Q 008888 257 EGKDIGNAFGVVVSLVMLITTILLTLV--MIVIWRTPSLLVALYFLVFFTMEG-----VYVSAVFTKIPEGGWIPFAISF 329 (550)
Q Consensus 257 ~S~~La~AYGiAVt~tM~iTT~L~~~v--~~~~w~~~~~~~~~~~~~F~~id~-----~ff~anl~K~~~GGW~pl~ia~ 329 (550)
|-+|++.=-+ |--|+|+--++|.++- .+...+.+.+...++..+|+++-- ++=..-..|+++-||+|+++|.
T Consensus 180 NPDNIatPia-ASlGDl~Tl~~L~~~~~~~~~~~~~~~~l~~~v~~~flal~pvwi~ia~~~~~t~~Vlk~gw~pvi~Am 258 (441)
T KOG3788|consen 180 NPDNIATPIA-ASLGDLLTLSSLAFFGSLFYNASDTSSYLTVLVVVFFLALLPVWIMIAAEDEGTRRVLKQGWEPVIIAM 258 (441)
T ss_pred Cchhhcchhh-hhhhhHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHhhhccCchhhhhHhcccHHHHHHH
Confidence 4455554332 2223444334443332 233344454555555556655432 2233446789999999999887
Q ss_pred Hhhh
Q 008888 330 FLAF 333 (550)
Q Consensus 330 ~l~~ 333 (550)
.+-+
T Consensus 259 ~ISs 262 (441)
T KOG3788|consen 259 MISS 262 (441)
T ss_pred HHHc
Confidence 7654
No 35
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=32.33 E-value=38 Score=37.74 Aligned_cols=64 Identities=11% Similarity=0.215 Sum_probs=45.2
Q ss_pred hcCCCccceEEecCCCCCC----cccchhhHHHHHHHhheeEEEeCCcchhhhhhhhhhHHHHHHHHHHHHH
Q 008888 215 VLDYFPRVKVVHTSSNKEG----EVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTL 282 (550)
Q Consensus 215 ~Lg~~Pr~~I~hTS~~~~G----QIYIP~vNwlL~i~~i~vvl~F~~S~~La~AYGiAVt~tM~iTT~L~~~ 282 (550)
..|-.||+.+...=++..| |+|+|.+=- -.+-=|-.-=|-++-+|=-.++||.+..|||++...
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~Li----VilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~ 292 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTLI----VILSWVSFWINRDASPARVALGITTVLTMTTLMTST 292 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhhh----hHHhHhHhhhccccchhheeeceehHHhHHHHHhhh
Confidence 3688899999999888888 999997521 111112222345555677889999999999988654
No 36
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=32.03 E-value=1.4e+02 Score=29.38 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=17.1
Q ss_pred CcchHHHHHHHhhhhhhhhhh
Q 008888 320 GGWIPFAISFFLAFIMFGWFN 340 (550)
Q Consensus 320 GGW~pl~ia~~l~~iM~tW~~ 340 (550)
.+|.-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999988766654
No 37
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=28.96 E-value=2.9e+02 Score=30.31 Aligned_cols=106 Identities=13% Similarity=0.037 Sum_probs=50.9
Q ss_pred eecceeeeecchhhh--hhccCCCCccchhhhhHHHHHHHHHHhcccchhhhh--cCCCcc---cccccccc----cccc
Q 008888 115 LLGGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLI--RHPNDH---EDGFYKFI----PKSV 183 (550)
Q Consensus 115 ~LG~V~L~vTGaEAL--yADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll--~~p~~~---~npFf~~~----P~~~ 183 (550)
.+..++.+.+|-|+. .|.==+--+|+|..+-.. +.-...+-|.-....+. .++++. ++|+-... -++.
T Consensus 216 ~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 294 (469)
T PRK11049 216 GFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAA 294 (469)
T ss_pred HHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhH
Confidence 344456777788864 333335566777766642 22233444443333222 122222 35653322 1222
Q ss_pred hHHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCcc
Q 008888 184 YWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 221 (550)
Q Consensus 184 ~~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr 221 (550)
..-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+
T Consensus 295 ~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 295 ASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 22233333334444444444455555556668899996
No 38
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=27.43 E-value=7e+02 Score=26.99 Aligned_cols=23 Identities=13% Similarity=0.382 Sum_probs=16.3
Q ss_pred hHHHHHHHHHhhhcccccccccc
Q 008888 43 LSAIILIVLFLMQKFGTSRVSFL 65 (550)
Q Consensus 43 is~~ILv~LF~iQ~~GT~kvg~~ 65 (550)
+.+++++.+..+.-+|+...+++
T Consensus 128 ~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 128 TCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHhchHHHHHH
Confidence 44556667778888898776664
No 39
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=25.57 E-value=59 Score=24.96 Aligned_cols=28 Identities=18% Similarity=0.522 Sum_probs=15.0
Q ss_pred HHhhhhhhhhhhhHHHHHHHHHhCCCChhH
Q 008888 329 FFLAFIMFGWFNGRQKKIEYELTHKIDLER 358 (550)
Q Consensus 329 ~~l~~iM~tW~~G~~~~~~~~~~~~~~l~~ 358 (550)
+++..+.+.|+.++ +.+++...++|+++
T Consensus 21 ~F~gi~~w~~~~~~--k~~~e~aa~lpl~d 48 (49)
T PF05545_consen 21 FFIGIVIWAYRPRN--KKRFEEAANLPLDD 48 (49)
T ss_pred HHHHHHHHHHcccc--hhhHHHHHccCccC
Confidence 33344555555555 45555556677653
No 40
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=24.68 E-value=9.5e+02 Score=26.32 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=17.5
Q ss_pred ehhHHHHHHHHHhhhcccccccccc
Q 008888 41 EALSAIILIVLFLMQKFGTSRVSFL 65 (550)
Q Consensus 41 vpis~~ILv~LF~iQ~~GT~kvg~~ 65 (550)
..++.++++....+.-+|+...+++
T Consensus 145 ~~~~~~~~~~~~~in~~g~k~~~~i 169 (475)
T TIGR03428 145 VLLGSVLLVLTTVINCIGVEWMSRV 169 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 4456666677778888898766554
No 41
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=24.20 E-value=2.2e+02 Score=28.72 Aligned_cols=48 Identities=25% Similarity=0.434 Sum_probs=33.8
Q ss_pred hHHHHHHHhheeEEEeCCcchhhhhh--hhhhHHHHHHHHHHHHHHHHHH
Q 008888 240 VNYILMILCVAVILIFGEGKDIGNAF--GVVVSLVMLITTILLTLVMIVI 287 (550)
Q Consensus 240 vNwlL~i~~i~vvl~F~~S~~La~AY--GiAVt~tM~iTT~L~~~v~~~~ 287 (550)
+|-..+.-.+++.-...-|+++.+|- |+||+.+|.+++.+.+.+-+.+
T Consensus 13 ~~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 13 VENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred HhhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35555555666666667777888876 5678888888888877776654
No 42
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=23.57 E-value=2.2e+02 Score=28.50 Aligned_cols=48 Identities=23% Similarity=0.395 Sum_probs=35.2
Q ss_pred hHHHHHHHhheeEEEeCCcchhhhhh--hhhhHHHHHHHHHHHHHHHHHH
Q 008888 240 VNYILMILCVAVILIFGEGKDIGNAF--GVVVSLVMLITTILLTLVMIVI 287 (550)
Q Consensus 240 vNwlL~i~~i~vvl~F~~S~~La~AY--GiAVt~tM~iTT~L~~~v~~~~ 287 (550)
+|-..+.-.+++.-...-|+++.+|- |+||+.+|.+++.+.+.+-+.+
T Consensus 14 ~nN~vl~~~LG~Cp~laVs~~~~~a~gmGlav~fV~~~s~~~~~~i~~~i 63 (193)
T PRK05151 14 VNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASICAWLVNTYI 63 (193)
T ss_pred HhhHHHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35555566666666677788888887 5678888888888888777666
No 43
>PF11827 DUF3347: Protein of unknown function (DUF3347); InterPro: IPR021782 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 169 to 570 amino acids in length.
Probab=22.56 E-value=35 Score=33.10 Aligned_cols=20 Identities=10% Similarity=0.428 Sum_probs=18.1
Q ss_pred ccchhhhhcCCCcccccccc
Q 008888 158 AGQTAYLIRHPNDHEDGFYK 177 (550)
Q Consensus 158 ~GQgA~ll~~p~~~~npFf~ 177 (550)
=||||+=|++-+.+.||||.
T Consensus 144 ~~kGa~WLs~~~~I~NPYfG 163 (174)
T PF11827_consen 144 NNKGAYWLSDSKEIKNPYFG 163 (174)
T ss_pred CCCCCeeCCCCCcCcCCCCc
Confidence 58999999999999999986
No 44
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=22.32 E-value=4.5e+02 Score=28.71 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=48.2
Q ss_pred ceeeeecchhhh--hhccCCCCccchhhhhHHHHHHHHHHhcccchhhhh-cCC-C------------cccccccccc--
Q 008888 118 GTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLI-RHP-N------------DHEDGFYKFI-- 179 (550)
Q Consensus 118 ~V~L~vTGaEAL--yADmGHFg~~~Ir~aW~~~V~PaLiLnY~GQgA~ll-~~p-~------------~~~npFf~~~-- 179 (550)
.++.+.+|-|+. .|+==+-.+|+|..+-..-+.- ..+-|......+. .-| + ....||....
T Consensus 205 ~~~~af~G~e~~~~~a~E~knP~r~iPrai~~~~~~-~~~~Y~l~~~~~~~~~p~~~~~l~~~~~~~~~~~~p~~~~~~~ 283 (478)
T TIGR00913 205 TAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWR-ILVFYILTLFLIGFLVPYNDPRLLSSSSSSDSAASPFVIAIQN 283 (478)
T ss_pred HHHhhhccHHHHHHHHHhhcChhhHHHHHHHHHHHH-HHHHHHHHHHHheeeccCCChhhcccccCCCcCCCcHHHHHHH
Confidence 345777888854 4555556667776665432222 2333444321111 111 1 1125654221
Q ss_pred --cccchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHhcCCCcc
Q 008888 180 --PKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 221 (550)
Q Consensus 180 --P~~~~~P~vilAtlAtIIASQA~ISG~FSl~~QAi~Lg~~Pr 221 (550)
.++...-+.+.+.++..-+..+.+.++=-++.+.-+-|.+|+
T Consensus 284 ~g~~~~~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 327 (478)
T TIGR00913 284 HGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQGLAPK 327 (478)
T ss_pred cCCchHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCcccH
Confidence 122222222233333333334444455556666678899996
Done!